Query psy18191
Match_columns 238
No_of_seqs 203 out of 2299
Neff 9.7
Searched_HMMs 29240
Date Sat Aug 17 01:10:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18191.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18191hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rbs_A Myomesin-1; immunoglobu 99.8 1.9E-20 6.6E-25 145.8 11.6 156 60-226 29-206 (207)
2 4fa8_A Secreted protein BARF1; 99.8 1.7E-20 5.9E-25 145.6 9.7 143 61-217 23-193 (203)
3 2yd1_A Tyrosine-protein phosph 99.8 1.8E-19 6.2E-24 140.0 14.0 160 61-234 33-207 (212)
4 3knb_B Obscurin-like protein 1 99.8 3.4E-19 1.1E-23 124.3 12.5 97 129-229 11-107 (107)
5 3b43_A Titin; I-SET IG fold, e 99.8 5.9E-19 2E-23 156.8 17.2 153 61-230 318-479 (570)
6 3kld_A Contactin 4, axcam, BIG 99.8 1.9E-19 6.6E-24 152.3 12.8 146 61-227 232-383 (384)
7 3b43_A Titin; I-SET IG fold, e 99.8 5.5E-19 1.9E-23 157.0 16.2 150 61-226 411-569 (570)
8 2wv3_A Neuroplastin; igcam, me 99.8 1.6E-18 5.4E-23 132.3 16.6 148 63-226 34-189 (190)
9 2yd6_A PTPRD protein; hydrolas 99.8 6E-19 2E-23 137.1 14.5 162 61-229 33-206 (212)
10 2a38_A Titin; Z1Z2, structural 99.8 1.6E-18 5.4E-23 132.3 16.0 150 61-226 32-194 (194)
11 2r15_A Myomesin-1; sarcomeric 99.8 3.6E-18 1.2E-22 132.1 18.1 162 61-228 30-211 (212)
12 3knb_A Titin; IG-like, titin, 99.8 8.3E-19 2.8E-23 120.7 12.3 96 130-227 4-99 (100)
13 3qs7_E FL cytokine receptor; i 99.8 7.7E-19 2.6E-23 150.9 14.6 150 61-234 255-421 (423)
14 2rik_A Titin; I-SET IG fold, p 99.8 3E-18 1E-22 138.5 16.4 150 61-227 126-284 (284)
15 4fqp_A Poliovirus receptor; im 99.8 3.1E-18 1.1E-22 140.7 15.8 150 60-230 144-307 (313)
16 2iep_A Muscle-specific kinase 99.8 1.1E-18 3.9E-23 132.8 11.6 151 61-229 34-192 (192)
17 2c5d_C AXL oncogene, tyrosine- 99.8 3.2E-18 1.1E-22 131.0 14.0 143 61-225 30-191 (195)
18 1epf_A NCAM, protein (neural c 99.8 4.4E-18 1.5E-22 129.5 14.8 147 62-225 31-189 (191)
19 3p3y_A Neurofascin; IG domains 99.8 1.1E-17 3.7E-22 141.5 18.4 149 61-227 249-403 (404)
20 3laf_A Deleted in colorectal c 99.8 2E-18 6.8E-23 146.1 13.7 148 62-229 249-403 (403)
21 4fom_A Poliovirus receptor-rel 99.8 8.4E-19 2.9E-23 143.6 10.6 150 61-230 142-303 (308)
22 2j8h_A Titin, connectin; cardi 99.8 8.7E-18 3E-22 128.5 14.8 149 61-226 31-196 (197)
23 3s97_C Contactin-1; carbonic a 99.8 3.7E-18 1.3E-22 130.7 12.4 156 61-227 36-201 (201)
24 2v44_A NCAM2, neural cell adhe 99.8 1.8E-17 6.2E-22 126.0 16.1 145 65-225 32-187 (189)
25 3kld_A Contactin 4, axcam, BIG 99.8 4.6E-18 1.6E-22 143.8 13.7 157 62-229 131-296 (384)
26 1rhf_A Tyrosine-protein kinase 99.8 2.4E-17 8.2E-22 124.6 16.2 142 61-226 29-182 (182)
27 3qs9_E FL cytokine receptor; i 99.8 2.6E-18 8.8E-23 151.5 12.3 146 61-230 255-417 (527)
28 1cs6_A Axonin-1; neural cell a 99.8 6.7E-18 2.3E-22 142.1 13.8 145 62-227 235-382 (382)
29 1qz1_A Neural cell adhesion mo 99.8 4.2E-18 1.4E-22 138.0 11.8 151 62-228 128-291 (291)
30 3sgj_C Human FCG3A receptor; r 99.8 1.3E-17 4.3E-22 129.4 13.6 143 65-235 39-182 (204)
31 3k0w_A Mucosa-associated lymph 99.8 3.6E-17 1.2E-21 127.7 16.0 149 61-228 45-203 (218)
32 2jll_A NCAM2, neural cell adhe 99.8 3.6E-17 1.2E-21 137.8 17.2 157 61-232 27-199 (389)
33 1bih_A Hemolin; insect immunit 99.8 7.2E-18 2.5E-22 142.3 12.6 144 61-225 239-394 (395)
34 2wim_A N-CAM 2, NCAM2, neural 99.8 4.7E-18 1.6E-22 137.7 10.9 152 62-230 126-287 (291)
35 3lcy_A Titin; A-BAND, IG tande 99.8 1.4E-17 4.8E-22 127.0 12.9 151 61-228 34-197 (197)
36 2v5t_A NCAM2, N-CAM 2, neural 99.7 1.8E-17 6.3E-22 125.7 13.0 149 61-226 29-187 (189)
37 2v9r_A Roundabout homolog 1; p 99.7 4E-18 1.4E-22 131.7 9.5 154 61-232 36-207 (212)
38 2cqv_A MLCK, myosin light chai 99.7 3.6E-17 1.2E-21 114.9 13.5 102 130-235 6-107 (114)
39 2kdg_A Myotilin; immonoglobuli 99.7 3.4E-17 1.2E-21 112.0 12.6 97 129-228 3-99 (100)
40 1g1c_A Immunoglobulin-like dom 99.7 6E-17 2.1E-21 110.6 13.7 95 130-228 4-99 (99)
41 2o26_X MAST/stem cell growth f 99.7 4.5E-17 1.5E-21 132.1 15.4 158 62-229 118-290 (290)
42 3b5h_A Cervical EMMPRIN, HAB18 99.7 1.1E-16 3.6E-21 121.3 16.1 145 63-227 29-183 (184)
43 2y25_A Myomesin; structural pr 99.7 4.6E-17 1.6E-21 133.3 15.1 163 61-228 135-316 (317)
44 2rik_A Titin; I-SET IG fold, p 99.7 2.3E-16 7.9E-21 127.3 18.5 153 62-231 33-195 (284)
45 2nzi_A Titin; IG-domain, FNIII 99.7 1E-16 3.5E-21 130.7 16.5 156 61-233 31-203 (305)
46 3qp3_A Titin; I-SET IG-like, s 99.7 1E-16 3.4E-21 110.3 14.0 97 128-228 5-101 (103)
47 3grw_A Fibroblast growth facto 99.7 2.1E-17 7.3E-22 130.3 11.7 164 61-234 42-225 (241)
48 1u2h_A APEG-1, aortic preferen 99.7 7.5E-17 2.6E-21 110.1 12.8 96 129-227 3-98 (99)
49 3ojm_B Fibroblast growth facto 99.7 2.7E-17 9.1E-22 128.6 11.2 159 61-233 46-227 (231)
50 2yd9_A Receptor-type tyrosine- 99.7 2.6E-16 8.9E-21 128.5 17.0 155 61-234 135-298 (304)
51 2v5m_A Dscam; neurobiology SPL 99.7 1E-16 3.4E-21 135.1 14.9 138 61-225 239-387 (388)
52 2edj_A Roundabout homolog 2; K 99.7 6.9E-17 2.4E-21 110.6 11.2 96 128-229 5-100 (100)
53 2ec8_A MAST/stem cell growth f 99.7 4.1E-16 1.4E-20 136.8 18.9 154 62-230 239-414 (524)
54 2ocw_A Polymeric-immunoglobuli 99.7 4.5E-16 1.5E-20 138.1 19.2 133 82-229 407-548 (585)
55 2kkq_A Myotilin; unknown funct 99.7 1.3E-16 4.6E-21 112.5 12.7 101 128-233 12-115 (116)
56 2yd9_A Receptor-type tyrosine- 99.7 9.9E-17 3.4E-21 131.0 13.8 154 61-226 33-200 (304)
57 3r4d_A CEA-related cell adhesi 99.7 8.7E-17 3E-21 124.0 12.5 131 83-231 73-204 (208)
58 1wit_A Twitchin 18TH IGSF modu 99.7 7.9E-17 2.7E-21 108.9 10.8 90 131-226 2-93 (93)
59 2vr9_A Roundabout 1, ROBO; imm 99.7 4.8E-17 1.6E-21 126.4 10.8 151 61-227 36-206 (217)
60 1qz1_A Neural cell adhesion mo 99.7 2.9E-16 9.9E-21 127.1 15.8 151 63-229 32-195 (291)
61 1itb_B Type 1 interleukin-1 re 99.7 1.4E-16 5E-21 130.5 14.1 161 61-227 136-314 (315)
62 2dm3_A KIAA0992 protein, palla 99.7 2.7E-17 9.3E-22 114.6 8.4 103 129-234 7-109 (110)
63 2va4_A NCAM2, N-CAM 2, neural 99.7 5.8E-16 2E-20 117.6 16.4 149 61-226 31-192 (192)
64 3ejj_X Macrophage colony-stimu 99.7 4.2E-16 1.4E-20 126.0 16.1 154 66-231 122-285 (289)
65 3p2t_A Leukocyte immunoglobuli 99.7 1.5E-16 5.2E-21 122.0 12.8 152 62-227 31-196 (196)
66 2y23_A Myomesin; structural pr 99.7 9.7E-17 3.3E-21 131.1 12.4 155 61-226 135-311 (312)
67 3puc_A Titin; I-SET IG-like do 99.7 4.7E-16 1.6E-20 106.0 13.8 96 128-227 3-98 (99)
68 1fnl_A Low affinity immunoglob 99.7 2.9E-16 1E-20 118.3 14.1 136 65-228 39-175 (175)
69 3v2a_R Vascular endothelial gr 99.7 8.5E-19 2.9E-23 160.1 0.0 136 83-233 627-762 (772)
70 1f97_A Junction adhesion molec 99.7 4.1E-17 1.4E-21 125.9 9.1 151 62-227 29-207 (212)
71 2dm2_A Palladin; beta-sandwich 99.7 8.5E-17 2.9E-21 112.2 9.7 103 129-234 6-109 (110)
72 2e7c_A Myosin-binding protein 99.7 5.3E-16 1.8E-20 109.6 13.8 98 128-230 18-118 (118)
73 3irg_B Obscurin-like protein 1 99.7 4.8E-16 1.7E-20 107.6 12.5 98 128-229 10-107 (107)
74 2d3v_A Leukocyte immunoglobuli 99.7 1.6E-16 5.5E-21 121.9 10.8 139 65-214 34-180 (196)
75 1ry7_B FGFR-3, fibroblast grow 99.7 4.8E-17 1.6E-21 134.4 8.4 158 61-232 150-332 (334)
76 3kvq_A Vascular endothelial gr 99.7 4.8E-17 1.7E-21 112.9 6.9 99 128-232 7-105 (108)
77 1e07_A Carcinoembryonic antige 99.7 1.5E-15 5.1E-20 136.3 18.2 137 62-226 494-639 (642)
78 3dmk_A DOWN syndrome cell adhe 99.7 4.1E-16 1.4E-20 143.6 14.8 146 63-226 649-808 (816)
79 1nbq_A JAM, junctional adhesio 99.7 2.8E-17 9.7E-22 126.5 5.9 150 62-226 32-208 (209)
80 2v9t_A Roundabout homolog 1; s 99.7 3.1E-16 1.1E-20 110.5 10.6 102 128-229 6-111 (117)
81 3jz7_A MCAR, CAR, coxsackievir 99.7 2E-17 6.9E-22 127.6 4.7 125 83-228 86-213 (214)
82 1fhg_A Telokin; immunoglobulin 99.7 1.1E-15 3.7E-20 113.2 13.9 102 127-232 37-139 (154)
83 3laf_A Deleted in colorectal c 99.7 6.4E-16 2.2E-20 130.7 14.3 156 61-229 148-313 (403)
84 1ugn_A LIR1, leukocyte immunog 99.7 3.3E-16 1.1E-20 120.3 11.1 150 65-227 34-198 (198)
85 2ifg_A High affinity nerve gro 99.7 1.3E-16 4.4E-21 133.2 9.4 150 61-229 185-347 (347)
86 3irg_A Titin; IG-like, titin, 99.7 1.2E-15 4E-20 104.1 12.3 96 130-227 4-99 (100)
87 2yr3_A Myosin light chain kina 99.7 1.3E-16 4.3E-21 109.1 7.4 92 128-226 8-99 (99)
88 2eo9_A Roundabout homolog 1; b 99.7 2.6E-16 8.8E-21 111.1 8.9 97 129-231 6-102 (118)
89 3oq3_B IFN-alpha/beta binding 99.7 1.6E-15 5.5E-20 125.5 15.0 152 63-225 158-328 (329)
90 2x1w_L Vascular endothelial gr 99.7 8.8E-16 3E-20 119.4 12.7 159 62-231 36-211 (213)
91 1uct_A Immunoglobulin alpha FC 99.7 2.1E-16 7.2E-21 123.8 9.1 151 63-229 36-200 (218)
92 1f2q_A High affinity immunoglo 99.7 5.3E-16 1.8E-20 116.9 10.9 139 64-230 35-174 (176)
93 1sy6_A T-cell surface glycopro 99.7 2.2E-16 7.6E-21 122.3 8.8 155 62-225 28-202 (204)
94 1jbj_A CD3 epsilon and gamma e 99.7 4.4E-16 1.5E-20 118.8 10.2 137 65-216 28-179 (186)
95 2ny1_B T-cell surface glycopro 99.7 7.9E-16 2.7E-20 116.6 11.3 115 82-231 69-183 (184)
96 1wwb_X Protein (brain derived 99.7 1.4E-15 4.7E-20 105.0 11.5 98 129-231 2-102 (103)
97 3mjg_X Beta-type platelet-deri 99.7 7.8E-16 2.7E-20 124.6 11.9 104 130-234 180-285 (289)
98 2gi7_A GPVI protein; IG-like d 99.7 2.2E-16 7.4E-21 120.1 7.6 146 62-225 34-183 (184)
99 4f80_A Butyrophilin subfamily 99.6 4.5E-16 1.5E-20 121.9 9.6 133 80-229 82-215 (226)
100 1bih_A Hemolin; insect immunit 99.6 3.4E-16 1.2E-20 132.0 9.2 163 61-229 128-309 (395)
101 3u83_A Poliovirus receptor-rel 99.6 7.4E-16 2.5E-20 127.0 11.0 150 61-233 163-326 (331)
102 1oll_A NK receptor; immune sys 99.6 6E-16 2E-20 118.1 9.6 147 64-227 32-188 (188)
103 3qs7_E FL cytokine receptor; i 99.6 2.3E-15 7.8E-20 129.2 14.3 163 61-229 75-325 (423)
104 2bk8_A Connectin, M1, titin he 99.6 7.6E-15 2.6E-19 99.8 14.1 91 134-228 4-95 (97)
105 4dkd_C Macrophage colony-stimu 99.6 3.2E-15 1.1E-19 120.9 14.4 157 64-232 120-286 (292)
106 4frw_A Poliovirus receptor-rel 99.6 1.4E-15 4.7E-20 117.2 11.5 85 137-225 124-209 (218)
107 2fbo_J V1V2;, variable region- 99.6 8E-16 2.7E-20 121.8 10.0 131 82-224 91-249 (250)
108 4i0k_A CD276 antigen; immunogl 99.6 4.1E-15 1.4E-19 115.7 13.9 134 82-229 73-208 (222)
109 1e07_A Carcinoembryonic antige 99.6 3.2E-15 1.1E-19 134.2 15.0 153 61-230 408-560 (642)
110 2ec8_A MAST/stem cell growth f 99.6 2.7E-14 9.1E-19 125.2 20.2 156 63-230 143-312 (524)
111 2wim_A N-CAM 2, NCAM2, neural 99.6 5.3E-15 1.8E-19 119.6 14.5 151 65-231 34-195 (291)
112 3sbw_C Programmed cell death 1 99.6 1.9E-15 6.6E-20 117.5 11.3 132 81-229 80-213 (222)
113 1hng_A CD2; T lymphocyte adhes 99.6 1.3E-15 4.6E-20 115.1 9.9 134 61-225 25-174 (176)
114 3p3y_A Neurofascin; IG domains 99.6 4E-15 1.4E-19 125.7 13.8 159 61-229 144-313 (404)
115 2yuz_A Myosin-binding protein 99.6 1.5E-15 5.3E-20 104.2 9.1 93 130-230 6-98 (100)
116 3bp6_B Programmed cell death 1 99.6 3.6E-15 1.2E-19 114.5 12.2 148 64-231 37-197 (202)
117 1nct_A Titin; cell adhesion, g 99.6 9.4E-16 3.2E-20 106.4 7.9 94 129-226 12-105 (106)
118 3rjd_A High affinity immunoglo 99.6 2.7E-15 9.4E-20 119.4 11.8 143 62-226 111-261 (262)
119 2oz4_A Intercellular adhesion 99.6 5.2E-16 1.8E-20 124.4 7.6 139 62-228 124-265 (265)
120 2ckn_A Basic fibroblast growth 99.6 7.6E-16 2.6E-20 104.5 7.2 88 129-225 7-94 (95)
121 1cs6_A Axonin-1; neural cell a 99.6 1.8E-15 6.2E-20 127.2 10.9 156 61-229 129-295 (382)
122 2wng_A Tyrosine-protein phosph 99.6 5.1E-15 1.7E-19 122.1 13.3 96 128-225 219-318 (327)
123 3bfo_A Mucosa-associated lymph 99.6 2.8E-15 9.5E-20 100.9 9.6 86 130-227 2-87 (91)
124 1he7_A High affinity nerve gro 99.6 2.7E-15 9.1E-20 106.9 9.9 96 130-231 3-103 (126)
125 1z7z_I Intercellular adhesion 99.6 3.3E-16 1.1E-20 134.7 6.2 139 62-228 309-450 (450)
126 1waa_A Titin; metal binding pr 99.6 6.5E-15 2.2E-19 99.7 11.3 89 130-227 4-92 (93)
127 4dep_C Interleukin-1 receptor 99.6 1.7E-16 5.8E-21 132.0 3.8 161 61-227 152-333 (349)
128 3dmk_A DOWN syndrome cell adhe 99.6 4.4E-14 1.5E-18 130.1 20.2 155 62-229 371-528 (816)
129 1gxe_A Myosin binding protein 99.6 3E-15 1E-19 109.0 9.9 86 138-226 25-138 (139)
130 3cx2_A Myosin-binding protein 99.6 6.8E-15 2.3E-19 102.2 11.3 96 130-226 3-107 (108)
131 2rcj_C Light chain; immunoglob 99.6 2.1E-14 7.2E-19 125.8 16.8 151 64-226 146-315 (523)
132 3vh8_G Killer cell immunoglobu 99.6 9.1E-15 3.1E-19 120.1 13.6 157 63-230 146-316 (316)
133 3caf_A Fibroblast growth facto 99.6 2.9E-15 1E-19 102.3 8.9 91 130-225 3-99 (100)
134 1nkr_A P58-CL42 KIR; inhibitor 99.6 7.9E-15 2.7E-19 112.9 12.2 149 63-225 35-200 (201)
135 3oq3_B IFN-alpha/beta binding 99.6 1.3E-15 4.3E-20 126.1 8.0 151 61-229 65-226 (329)
136 1dr9_A B7-1 (CD80), T lymphocy 99.6 8.7E-15 3E-19 112.3 11.9 150 62-223 26-197 (201)
137 2dav_A SLOW MYBP-C, myosin-bin 99.6 1.5E-14 5E-19 103.1 11.8 101 132-233 8-118 (126)
138 1vca_A VCAM-D1,2, human vascul 99.6 1.5E-14 5.2E-19 111.7 12.9 156 61-230 28-200 (202)
139 1ry7_B FGFR-3, fibroblast grow 99.6 1.3E-15 4.3E-20 125.9 6.8 158 61-229 36-218 (334)
140 3ry4_A Low affinity immunoglob 99.6 1.9E-14 6.6E-19 107.3 12.6 136 63-226 34-170 (170)
141 1p6f_A NKP46, natural cytotoxi 99.6 6.4E-15 2.2E-19 117.2 9.9 154 63-233 34-197 (242)
142 3qs9_E FL cytokine receptor; i 99.6 1.3E-14 4.3E-19 127.9 12.7 150 61-232 353-515 (527)
143 3o4o_C Interleukin-1 receptor 99.6 3E-16 1E-20 130.0 2.2 162 61-227 152-335 (339)
144 2y23_A Myomesin; structural pr 99.6 3.4E-14 1.2E-18 115.8 14.3 144 61-216 29-192 (312)
145 2cry_A KIN of IRRE-like protei 99.6 1.3E-15 4.6E-20 108.1 4.9 104 125-230 8-116 (122)
146 2lu7_A Obscurin-like protein 1 99.6 1.6E-14 5.4E-19 95.9 9.7 82 138-228 3-84 (84)
147 2y25_A Myomesin; structural pr 99.6 2.4E-15 8.2E-20 123.0 5.9 148 62-226 35-199 (317)
148 2pet_A Lutheran blood group gl 99.6 2.6E-14 8.8E-19 111.7 11.6 134 83-225 79-229 (231)
149 2edf_A Obscurin; beta-sandwich 99.6 2.3E-14 7.9E-19 98.5 9.9 96 129-233 6-101 (103)
150 2cr3_A Basic fibroblast growth 99.6 7.5E-15 2.6E-19 100.4 7.3 88 138-234 10-97 (99)
151 2v5m_A Dscam; neurobiology SPL 99.6 2.1E-14 7.1E-19 120.8 11.6 157 64-229 136-308 (388)
152 3vh8_G Killer cell immunoglobu 99.6 4.1E-14 1.4E-18 116.2 13.0 159 63-230 51-218 (316)
153 1b6u_A KIR2DL3, P58 killer cel 99.6 1.6E-14 5.3E-19 116.0 9.9 154 63-231 34-205 (257)
154 3mj8_L Stimulatory hamster ant 99.6 8.7E-15 3E-19 113.3 8.0 134 81-222 70-208 (213)
155 2e6p_A Obscurin-like protein 1 99.6 1.9E-14 6.6E-19 99.0 8.9 94 130-232 6-102 (104)
156 2ghw_B Anti-SARS SCFV antibody 99.5 7.9E-14 2.7E-18 110.4 13.6 138 81-226 81-241 (247)
157 1wwc_A Protein (NT-3 growth fa 99.5 1.7E-14 5.7E-19 101.8 8.6 100 127-231 4-105 (118)
158 4dep_C Interleukin-1 receptor 99.5 1.5E-14 5.1E-19 120.2 9.4 147 62-228 46-218 (349)
159 1itb_B Type 1 interleukin-1 re 99.5 2.9E-14 9.8E-19 116.7 10.7 150 59-226 31-201 (315)
160 3mtr_A N-CAM-1, NCAM-1, neural 99.5 1.3E-13 4.6E-18 106.9 13.9 103 128-233 16-118 (215)
161 3so5_A LIG-3, leucine-rich rep 99.5 8.5E-14 2.9E-18 96.4 11.1 99 128-226 7-112 (112)
162 1x44_A Myosin-binding protein 99.5 3.6E-14 1.2E-18 97.6 9.1 92 131-232 7-101 (103)
163 2o26_X MAST/stem cell growth f 99.5 2.2E-14 7.5E-19 116.2 9.2 139 65-227 39-183 (290)
164 1wio_A CD4, T-cell surface gly 99.5 3.1E-14 1E-18 119.2 10.2 145 61-227 123-293 (363)
165 2rcj_C Light chain; immunoglob 99.5 1.2E-13 4.2E-18 120.9 13.8 148 62-224 248-417 (523)
166 4hwu_A Fibroblast growth facto 99.5 4.3E-14 1.5E-18 95.7 8.4 85 137-231 7-91 (95)
167 2lvc_A Obscurin-like protein 1 99.5 3.7E-14 1.3E-18 95.5 8.0 87 130-225 3-91 (91)
168 2ocw_A Polymeric-immunoglobuli 99.5 1.7E-13 5.8E-18 121.5 14.0 135 81-229 75-223 (585)
169 1gl4_B Basement membrane-speci 99.5 6.3E-14 2.2E-18 95.3 8.4 87 131-226 9-97 (98)
170 2yuv_A Myosin-binding protein 99.5 2.4E-13 8.1E-18 92.9 11.2 90 130-230 6-98 (100)
171 2wng_A Tyrosine-protein phosph 99.5 1.4E-13 4.7E-18 113.5 12.0 146 62-216 32-206 (327)
172 3umt_A SCFV heavy chain and li 99.5 2.1E-13 7.2E-18 108.7 12.6 145 82-232 82-250 (256)
173 2edn_A Myosin-binding protein 99.5 3.3E-14 1.1E-18 100.1 6.8 98 130-228 11-117 (118)
174 1nqb_A Single-chain antibody f 99.5 2.8E-13 9.7E-18 108.3 13.2 139 81-230 79-236 (256)
175 3mj6_A Junctional adhesion mol 99.5 4.6E-14 1.6E-18 112.9 8.6 126 82-228 85-238 (268)
176 3d9a_L Light chain of hyhel10 99.5 2.6E-14 9E-19 110.5 6.9 126 81-216 71-203 (213)
177 2eny_A Obscurin; beta-sandwich 99.5 5.5E-14 1.9E-18 97.0 7.6 95 130-232 7-102 (104)
178 2dlt_A Myosin binding protein 99.5 1.1E-13 3.9E-18 95.5 9.2 92 129-227 6-97 (106)
179 2yd1_A Tyrosine-protein phosph 99.5 1.7E-12 5.9E-17 100.3 16.9 99 130-230 5-105 (212)
180 2edk_A Myosin-binding protein 99.5 1.9E-14 6.6E-19 98.6 5.1 92 130-229 7-101 (101)
181 1z7z_I Intercellular adhesion 99.5 1.3E-12 4.3E-17 112.2 17.7 154 65-230 120-285 (450)
182 3uzq_A Anti-dengue MAB 4E11; d 99.5 2.3E-13 7.9E-18 108.3 11.9 143 82-233 81-250 (253)
183 3eow_R Poliovirus receptor; im 99.5 8.3E-14 2.8E-18 108.5 9.0 135 82-235 79-218 (221)
184 3m45_A Cell adhesion molecule 99.5 2.9E-13 9.8E-18 93.3 10.5 96 130-229 5-108 (108)
185 2ens_A Advanced glycosylation 99.5 1.9E-14 6.6E-19 97.6 4.4 86 130-227 9-95 (96)
186 2if7_A SLAM family member 6; N 99.5 9E-13 3.1E-17 100.9 14.2 110 83-222 72-187 (193)
187 2yd6_A PTPRD protein; hydrolas 99.5 7.4E-13 2.5E-17 102.4 13.8 98 128-228 3-101 (212)
188 3o4o_C Interleukin-1 receptor 99.5 1.4E-14 4.9E-19 119.8 4.3 152 60-229 51-222 (339)
189 3rjd_A High affinity immunoglo 99.5 5E-13 1.7E-17 106.2 13.0 137 65-230 33-170 (262)
190 3tv3_L PGT128 light chain, IG 99.5 5.2E-14 1.8E-18 108.8 7.0 130 81-217 68-202 (211)
191 2edh_A Obscurin; structural ge 99.5 1.5E-12 5.2E-17 90.8 13.8 93 130-232 18-110 (113)
192 3lcy_A Titin; A-BAND, IG tande 99.5 7.3E-13 2.5E-17 100.6 13.2 99 128-230 4-102 (197)
193 2dku_A KIAA1556 protein; beta- 99.5 2.7E-13 9.2E-18 93.0 9.8 95 130-233 7-101 (103)
194 2j8h_A Titin, connectin; cardi 99.5 9E-13 3.1E-17 100.4 13.7 97 130-229 3-100 (197)
195 2cr6_A KIAA1556 protein, obscu 99.5 1.4E-13 4.7E-18 96.7 8.4 91 131-231 13-106 (115)
196 2k1m_A Myosin-binding protein 99.5 3.9E-13 1.3E-17 91.0 10.4 87 131-226 8-94 (95)
197 1qgc_4 Protein (immunoglobulin 99.5 4.9E-13 1.7E-17 114.3 13.2 153 61-227 144-338 (438)
198 1lk3_L 9D7 light chain; antige 99.5 1.6E-13 5.4E-18 106.0 9.0 125 82-216 71-202 (210)
199 3r06_A Anti-mouse CD3epsilon a 99.5 2.8E-13 9.6E-18 104.7 10.2 127 81-216 71-203 (213)
200 3s96_B 3B5H10 FAB light chain; 99.5 9.7E-14 3.3E-18 107.6 7.6 133 81-217 75-211 (218)
201 2a38_A Titin; Z1Z2, structural 99.5 6.4E-13 2.2E-17 100.8 12.0 95 130-227 4-99 (194)
202 2p1y_A Bispecific alpha/beta T 99.5 7.4E-13 2.5E-17 104.1 12.6 127 82-213 74-222 (238)
203 3pv7_A B7-H6, IG-like domain-c 99.5 6.7E-13 2.3E-17 105.1 12.4 129 83-225 84-224 (248)
204 3qr2_A Basigin; CD147, EMMPRIN 99.5 7.3E-13 2.5E-17 95.8 11.5 89 128-216 18-116 (137)
205 1q0x_L FAB 9B1, light chain; a 99.5 2E-13 7E-18 105.5 9.1 128 81-216 73-205 (212)
206 2vol_A Murine IGG FC; FC, zinc 99.5 2.3E-13 8E-18 105.2 9.3 143 64-215 37-197 (207)
207 2vr9_A Roundabout 1, ROBO; imm 99.5 5.8E-13 2E-17 103.1 11.4 100 128-227 6-106 (217)
208 1f3r_B FV antibody fragment; I 99.5 3.2E-13 1.1E-17 107.9 10.2 147 81-233 78-251 (257)
209 2cpc_A KIAA0657 protein; immun 99.5 1.3E-12 4.3E-17 91.1 11.9 95 129-232 8-105 (113)
210 1nfd_E H57 FAB; complex (immun 99.4 3.8E-14 1.3E-18 109.6 4.4 129 81-216 69-202 (212)
211 2e6q_A Obscurin-like protein 1 99.4 1.4E-12 4.8E-17 91.0 12.0 95 130-231 7-109 (112)
212 1c1e_H Catalytic antibody 1E9 99.4 1.6E-13 5.6E-18 106.6 7.8 129 81-217 79-211 (219)
213 3juy_B 3B3 single chain varian 99.4 2.1E-12 7.2E-17 102.9 14.4 93 131-225 149-255 (256)
214 3nl4_L Antigen binding fragmen 99.4 1.8E-13 6.2E-18 105.7 7.9 123 81-210 71-198 (213)
215 2rgs_A I, IG gamma-2B heavy ch 99.4 1.6E-13 5.5E-18 107.0 7.6 145 63-216 44-206 (218)
216 1wio_A CD4, T-cell surface gly 99.4 1.2E-13 4.2E-18 115.5 7.2 115 82-231 68-182 (363)
217 3s35_X Vascular endothelial gr 99.4 1E-12 3.5E-17 92.9 10.9 94 137-231 14-114 (122)
218 2v5y_A Receptor-type tyrosine- 99.4 4.3E-12 1.5E-16 115.8 17.7 160 61-233 103-266 (731)
219 3gkz_A Anti-methamphetamine si 99.4 1E-12 3.4E-17 104.8 11.9 148 82-232 87-254 (257)
220 2iep_A Muscle-specific kinase 99.4 4.1E-13 1.4E-17 101.8 9.1 98 128-229 4-101 (192)
221 1pd6_A Cardiac MYBP-C;, myosin 99.4 7E-13 2.4E-17 91.5 9.4 90 129-226 13-103 (104)
222 1hnf_A CD2; T lymphocyte adhes 99.4 4.8E-13 1.6E-17 101.7 9.3 133 62-225 29-179 (182)
223 2e7b_A Obscurin; IG-like domai 99.4 4.7E-13 1.6E-17 91.8 8.2 93 130-231 7-99 (103)
224 3ejj_X Macrophage colony-stimu 99.4 6.6E-13 2.2E-17 107.1 10.4 144 65-228 31-182 (289)
225 1rhf_A Tyrosine-protein kinase 99.4 7.8E-13 2.7E-17 99.5 10.1 98 131-229 2-99 (182)
226 3sob_L Antibody light chain; b 99.4 3.8E-13 1.3E-17 105.4 8.5 127 81-216 94-226 (237)
227 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.4 2.3E-12 8E-17 102.7 13.2 144 81-229 76-250 (256)
228 2nzi_A Titin; IG-domain, FNIII 99.4 2.5E-12 8.7E-17 104.5 13.6 97 130-229 3-100 (305)
229 2c5d_C AXL oncogene, tyrosine- 99.4 1.9E-12 6.5E-17 98.5 11.8 99 131-229 2-107 (195)
230 2zg1_A Sialic acid-binding IG- 99.4 7.8E-13 2.7E-17 102.1 9.6 126 82-225 83-213 (214)
231 2xzc_L FAB A.17 light chain; i 99.4 4E-13 1.4E-17 104.2 7.9 126 82-216 73-205 (216)
232 4dkd_C Macrophage colony-stimu 99.4 5.5E-13 1.9E-17 107.7 8.8 142 66-227 32-181 (292)
233 3d9a_H Heavy chain of hyhel10 99.4 6E-13 2.1E-17 102.8 8.7 123 82-217 79-205 (210)
234 3u83_A Poliovirus receptor-rel 99.4 2.9E-12 9.9E-17 105.4 13.1 132 82-229 93-232 (331)
235 2c1o_A IGK-C protein; FAB frag 99.4 4.8E-13 1.7E-17 106.3 8.1 125 82-216 114-245 (254)
236 4fom_A Poliovirus receptor-rel 99.4 8.6E-13 3E-17 107.6 9.3 132 82-229 75-212 (308)
237 1qok_A MFE-23 recombinant anti 99.4 4.1E-12 1.4E-16 102.9 13.2 142 81-229 105-270 (282)
238 3auv_A SC-DSFV derived from th 99.4 5.5E-12 1.9E-16 101.7 13.5 142 82-230 83-257 (276)
239 3v2a_R Vascular endothelial gr 99.4 2.8E-13 9.6E-18 123.6 5.9 148 63-231 255-423 (772)
240 2v9r_A Roundabout homolog 1; p 99.4 3.1E-12 1.1E-16 98.3 10.9 100 129-228 7-110 (212)
241 2dm7_A KIAA1556 protein; beta- 99.4 3E-12 1E-16 88.5 9.5 91 130-230 7-97 (108)
242 3rbg_A Cytotoxic and regulator 99.4 1.4E-12 4.8E-17 92.7 7.9 91 137-231 7-105 (124)
243 4fmk_A Poliovirus receptor-rel 99.4 3.3E-12 1.1E-16 98.6 10.4 132 82-227 84-219 (225)
244 4fqp_A Poliovirus receptor; im 99.4 5.3E-12 1.8E-16 103.3 12.1 131 83-227 81-215 (313)
245 3bqu_C 3H6 FAB light chain; be 99.4 7.7E-13 2.6E-17 103.7 6.7 124 82-215 94-224 (233)
246 2v5t_A NCAM2, N-CAM 2, neural 99.4 7.7E-12 2.6E-16 94.3 12.1 95 131-229 2-97 (189)
247 3ojm_B Fibroblast growth facto 99.4 2.8E-12 9.5E-17 99.8 9.6 97 129-230 13-115 (231)
248 1q9r_B S25-2 FAB (IGG1K) heavy 99.4 1.4E-12 4.8E-17 101.6 7.9 129 82-217 82-214 (222)
249 1igt_B IGG2A intact antibody - 99.4 3.9E-12 1.3E-16 109.2 11.2 154 62-216 152-331 (444)
250 2jll_A NCAM2, neural cell adhe 99.4 1.1E-11 3.7E-16 104.2 13.5 94 131-230 1-102 (389)
251 3zyj_A Leucine-rich repeat-con 99.3 7.3E-12 2.5E-16 107.8 12.5 99 128-232 338-438 (440)
252 2va4_A NCAM2, N-CAM 2, neural 99.3 4.2E-12 1.4E-16 96.0 9.7 93 131-229 2-96 (192)
253 1qgc_4 Protein (immunoglobulin 99.3 2.7E-12 9.3E-17 109.6 9.4 127 81-216 75-207 (438)
254 1i1c_A IGG2A, IG gamma-2A chai 99.3 4.9E-12 1.7E-16 100.2 10.1 146 62-216 48-212 (239)
255 3bkj_L WO2 IGG2A FAB fragment 99.3 1.6E-12 5.4E-17 103.4 7.3 126 82-216 110-241 (252)
256 2j6e_L IGM, FAB light chain; a 99.3 7.8E-13 2.7E-17 103.6 5.1 130 82-217 92-226 (234)
257 4dzb_B Vbeta2 (MAIT T cell rec 99.3 4.4E-12 1.5E-16 100.2 9.4 129 81-216 77-221 (246)
258 1l6x_A Immunoglobulin gamma-1 99.3 4.8E-12 1.6E-16 97.7 9.3 147 64-215 37-197 (207)
259 3nl4_H Antigen binding fragmen 99.3 4.6E-12 1.6E-16 98.2 9.0 135 81-224 75-211 (215)
260 1epf_A NCAM, protein (neural c 99.3 1.7E-11 5.9E-16 92.7 12.0 97 131-229 2-101 (191)
261 3p2t_A Leukocyte immunoglobuli 99.3 1.1E-12 3.8E-17 100.3 5.1 93 129-230 3-99 (196)
262 1z9m_A GAPA225; nectin-like, I 99.3 9.2E-12 3.2E-16 90.8 9.5 91 136-233 43-144 (145)
263 1igt_B IGG2A intact antibody - 99.3 4E-12 1.4E-16 109.1 8.7 142 63-215 273-434 (444)
264 3ux9_B SCFV antibody; five hel 99.3 1.4E-11 4.8E-16 97.9 11.2 74 139-212 142-235 (256)
265 3uto_A Twitchin; kinase, muscl 99.3 2.8E-11 9.5E-16 107.5 14.1 95 128-226 479-573 (573)
266 3esu_F Antibody 14B7* light ch 99.3 2E-11 6.9E-16 96.6 11.9 125 82-211 75-231 (250)
267 1mju_H Immunoglobulin MS6-12; 99.3 4.5E-12 1.5E-16 99.4 8.0 140 81-232 79-222 (227)
268 2gi7_A GPVI protein; IG-like d 99.3 1.1E-11 3.6E-16 94.0 9.7 87 128-229 5-92 (184)
269 2dru_A Chimera of CD48 antigen 99.3 3.5E-11 1.2E-15 91.1 12.4 62 145-222 114-176 (180)
270 2znx_A SCFV; fluorotryptohpan, 99.3 4.2E-11 1.4E-15 94.6 13.4 124 81-216 71-228 (242)
271 1za6_B IGG heavy chain; immuno 99.3 6.2E-12 2.1E-16 104.5 8.8 125 81-216 79-207 (344)
272 2v44_A NCAM2, neural cell adhe 99.3 5.7E-11 1.9E-15 89.7 13.3 94 133-230 4-98 (189)
273 1moe_A Anti-CEA MAB T84.66; an 99.3 7.7E-11 2.6E-15 92.6 14.3 122 82-211 76-219 (240)
274 2wqr_A IG epsilon chain C regi 99.3 9.2E-12 3.1E-16 102.5 8.9 140 65-215 148-309 (323)
275 2fbj_H IGA-kappa J539 FAB (hea 99.3 2.3E-11 7.9E-16 94.8 10.8 129 81-217 79-212 (220)
276 1pz5_B Heavy chain of FAB (SYA 99.3 6.1E-12 2.1E-16 97.8 7.4 131 82-222 82-216 (220)
277 2wv3_A Neuroplastin; igcam, me 99.3 1.5E-11 5.3E-16 93.2 9.5 89 130-229 2-93 (190)
278 2d3v_A Leukocyte immunoglobuli 99.3 4E-12 1.4E-16 97.2 6.0 95 129-229 3-98 (196)
279 1uct_A Immunoglobulin alpha FC 99.3 5.1E-12 1.8E-16 98.6 6.6 94 128-229 6-104 (218)
280 3grw_A Fibroblast growth facto 99.3 1.6E-11 5.4E-16 96.4 9.5 95 130-229 10-110 (241)
281 1ccz_A Protein (CD58); LFA-3, 99.3 1.4E-11 4.9E-16 92.5 8.8 60 150-224 109-168 (171)
282 2eo1_A OBSCN protein, cDNA FLJ 99.3 1.5E-11 5E-16 84.1 8.1 81 139-228 19-99 (102)
283 2id5_A Lingo-1, leucine rich r 99.3 8.3E-12 2.8E-16 108.3 8.4 92 131-227 384-477 (477)
284 2c1o_A IGK-C protein; FAB frag 99.3 2E-11 6.9E-16 96.8 9.7 122 88-227 11-150 (254)
285 1f97_A Junction adhesion molec 99.3 1.9E-11 6.6E-16 93.7 8.8 97 131-232 1-108 (212)
286 1hzh_H IGG, immunoglobulin hea 99.3 3.1E-11 1.1E-15 104.0 11.0 149 64-216 164-340 (457)
287 3zyi_A Leucine-rich repeat-con 99.2 1.2E-11 3.9E-16 106.9 8.1 98 129-233 350-449 (452)
288 1vca_A VCAM-D1,2, human vascul 99.2 5.3E-11 1.8E-15 91.6 10.9 88 136-231 5-94 (202)
289 3rbs_A Myomesin-1; immunoglobu 99.2 4.1E-11 1.4E-15 92.7 10.3 87 132-223 4-91 (207)
290 3liz_H 4C3 monoclonal antibody 99.2 4.4E-11 1.5E-15 95.3 10.7 136 82-226 80-219 (253)
291 2wqr_A IG epsilon chain C regi 99.2 1.1E-11 3.7E-16 102.1 7.4 85 130-216 111-204 (323)
292 3pl6_D MBP peptide / T-cell re 99.2 2.2E-11 7.5E-16 97.5 8.9 127 81-216 100-242 (268)
293 3k0w_A Mucosa-associated lymph 99.2 4.6E-11 1.6E-15 92.8 10.3 88 129-228 16-103 (218)
294 2oz4_A Intercellular adhesion 99.2 1.3E-11 4.5E-16 98.6 7.0 137 65-231 37-186 (265)
295 2gki_A Nuclease; anti-DNA anti 99.2 1.2E-10 4.1E-15 94.7 12.8 145 81-230 101-275 (291)
296 4fa8_A Secreted protein BARF1; 99.2 1.9E-11 6.4E-16 94.5 7.5 87 140-229 2-107 (203)
297 1ugn_A LIR1, leukocyte immunog 99.2 9.4E-12 3.2E-16 95.2 5.8 95 129-229 3-99 (198)
298 3bp6_B Programmed cell death 1 99.2 9.6E-11 3.3E-15 89.6 11.3 95 134-232 5-108 (202)
299 1oll_A NK receptor; immune sys 99.2 3.1E-11 1.1E-15 91.7 8.4 94 130-229 3-97 (188)
300 1za6_B IGG heavy chain; immuno 99.2 1.2E-11 4E-16 102.9 6.4 89 128-216 239-331 (344)
301 1svz_A Immunoglobulin;, single 99.2 9.7E-11 3.3E-15 92.5 11.3 124 81-212 76-228 (247)
302 2xot_A Amphoterin-induced prot 99.2 4.9E-11 1.7E-15 100.1 10.0 86 138-229 253-339 (361)
303 2vsd_A CHIR AB1; immune system 99.2 2.3E-11 7.7E-16 83.9 6.6 91 130-228 4-97 (105)
304 2w59_A IGY FCU3-4; immunoglobu 99.2 4.1E-11 1.4E-15 94.2 8.9 140 65-216 47-218 (231)
305 1xau_A B- and T-lymphocyte att 99.2 1.5E-10 5E-15 78.5 10.1 89 140-228 23-117 (122)
306 1dee_B IGM RF 2A2; FAB-IBP com 99.2 2.1E-10 7E-15 89.5 12.7 133 81-217 79-218 (223)
307 4ei6_B Vbeta16 XV19 type II na 99.2 6.4E-11 2.2E-15 93.4 9.8 129 81-216 76-220 (245)
308 1hng_A CD2; T lymphocyte adhes 99.2 9E-11 3.1E-15 88.4 10.1 89 140-232 5-104 (176)
309 3omz_A Human vdelta1 gamma del 99.2 1.8E-10 6E-15 91.8 12.0 141 82-231 80-254 (259)
310 3q5y_A TCR N15 beta; IG, T cel 99.2 5.7E-11 2E-15 93.5 8.6 130 81-215 75-213 (240)
311 1iga_A IGA1; immunoglobulin; N 99.2 4.5E-10 1.5E-14 97.3 14.2 92 130-224 245-342 (475)
312 2aty_A Complement receptor chi 99.2 2.5E-10 8.4E-15 96.3 12.2 142 65-215 203-362 (376)
313 1nkr_A P58-CL42 KIR; inhibitor 99.2 8.9E-11 3E-15 90.0 8.7 99 128-230 5-107 (201)
314 1c5d_H Monoclonal antibody aga 99.2 1.4E-10 4.9E-15 89.9 9.8 127 82-217 79-207 (215)
315 4hwn_A FC receptor-like A; FCR 99.2 7E-11 2.4E-15 81.9 7.2 90 129-230 6-102 (108)
316 1fnl_A Low affinity immunoglob 99.2 5.7E-11 1.9E-15 89.0 7.3 83 129-227 5-88 (175)
317 2qsq_A Carcinoembryonic antige 99.2 2.8E-10 9.7E-15 79.2 10.2 85 140-228 9-110 (111)
318 1dn0_B IGM-kappa cold agglutin 99.2 4.2E-10 1.4E-14 88.4 12.4 141 82-227 79-227 (232)
319 1igy_B IGG1 intact antibody MA 99.2 3.7E-12 1.3E-16 109.1 0.6 88 128-215 333-424 (434)
320 3fku_X Neutralizing antibody F 99.2 1.2E-10 4E-15 94.2 9.4 148 81-231 79-254 (280)
321 3qib_D 2B4 beta chain; IG doma 99.2 6.9E-11 2.4E-15 94.8 7.8 129 81-216 101-245 (270)
322 3nfj_J T cell receptor beta ch 99.2 1.5E-10 5.2E-15 91.3 9.5 131 81-216 74-220 (245)
323 3sgj_C Human FCG3A receptor; r 99.2 6.9E-11 2.4E-15 91.1 7.3 83 130-228 6-89 (204)
324 1nbq_A JAM, junctional adhesio 99.2 1E-10 3.4E-15 89.5 8.2 100 130-233 3-112 (209)
325 3m8o_H Immunoglobulin A1 heavy 99.1 4.4E-10 1.5E-14 87.3 11.9 127 82-217 82-214 (221)
326 3nl4_L Antigen binding fragmen 99.1 3.7E-10 1.3E-14 86.9 11.3 94 132-227 2-110 (213)
327 3mjg_X Beta-type platelet-deri 99.1 1.4E-10 4.8E-15 93.5 9.2 142 66-228 28-179 (289)
328 2ifg_A High affinity nerve gro 99.1 5.3E-12 1.8E-16 105.1 0.6 115 106-230 137-252 (347)
329 1op3_H FAB 2G12, heavy chain; 99.1 8.6E-11 2.9E-15 91.8 7.5 131 81-216 79-215 (225)
330 1jhl_L IGG1-kappa D11.15 FV (l 99.1 7.2E-10 2.5E-14 76.5 11.2 92 134-226 4-107 (108)
331 3r06_A Anti-mouse CD3epsilon a 99.1 4.2E-10 1.4E-14 86.6 10.9 94 132-227 2-108 (213)
332 3bae_H WO2 IGG2A FAB fragment 99.1 1.1E-10 3.9E-15 91.2 7.7 130 81-217 80-217 (228)
333 1hzh_H IGG, immunoglobulin hea 99.1 1.6E-10 5.6E-15 99.5 8.9 138 82-224 80-226 (457)
334 3d9a_L Light chain of hyhel10 99.1 3.7E-10 1.3E-14 86.9 9.8 93 134-228 4-109 (213)
335 3ry4_A Low affinity immunoglob 99.1 2.6E-10 8.9E-15 84.6 8.4 83 130-228 3-86 (170)
336 1x9q_A SCFV, 4M5.3 anti-fluore 99.1 9.1E-10 3.1E-14 88.2 12.2 76 137-212 157-254 (268)
337 1f2q_A High affinity immunoglo 99.1 4.5E-11 1.5E-15 89.6 3.9 81 130-226 3-84 (176)
338 3o3u_N Maltose-binding peripla 99.1 9.9E-10 3.4E-14 97.3 12.7 145 61-216 394-567 (581)
339 3khq_A B-cell antigen receptor 99.1 6E-10 2.1E-14 80.1 9.3 96 133-232 19-122 (133)
340 3mj8_L Stimulatory hamster ant 99.1 7.1E-10 2.4E-14 85.3 10.2 92 134-228 4-110 (213)
341 1igy_B IGG1 intact antibody MA 99.1 2.2E-10 7.4E-15 98.1 8.0 123 82-216 79-205 (434)
342 2fbo_J V1V2;, variable region- 99.1 6.3E-10 2.2E-14 87.5 9.9 92 135-230 6-134 (250)
343 1pko_A Myelin oligodendrocyte 99.1 5.5E-09 1.9E-13 75.3 14.1 94 134-230 9-124 (139)
344 1gsm_A Madcam-1, mucosal addre 99.1 6.1E-10 2.1E-14 86.2 9.4 86 136-231 11-99 (210)
345 1lk3_L 9D7 light chain; antige 99.1 1E-09 3.5E-14 84.3 10.8 92 134-228 4-108 (210)
346 1gsm_A Madcam-1, mucosal addre 99.1 3.4E-09 1.2E-13 82.0 13.5 136 65-216 39-195 (210)
347 2gjj_A A21 single-chain antibo 99.1 1.1E-09 3.6E-14 87.8 11.0 124 81-212 81-239 (264)
348 1p6f_A NKP46, natural cytotoxi 99.1 3E-10 1E-14 90.0 7.2 96 128-229 4-100 (242)
349 3to4_D NKT vbeta2 (mouse varia 99.0 7.9E-10 2.7E-14 87.8 9.5 125 83-213 76-217 (253)
350 3r4d_A CEA-related cell adhesi 99.0 8E-10 2.7E-14 84.5 9.2 90 139-232 7-113 (208)
351 2if7_A SLAM family member 6; N 99.0 5.2E-10 1.8E-14 85.3 8.0 89 137-230 4-109 (193)
352 1mqk_L Antibody 7E2 FV fragmen 99.0 1.8E-09 6.1E-14 76.1 10.1 99 134-234 4-116 (120)
353 3r08_E T-cell surface glycopro 99.0 1.2E-10 4.1E-15 76.2 3.7 60 138-211 6-66 (82)
354 1eaj_A Coxsackie virus and ade 99.0 8E-10 2.7E-14 77.6 8.2 87 136-227 10-125 (126)
355 1hnf_A CD2; T lymphocyte adhes 99.0 5.7E-10 1.9E-14 84.6 7.9 90 139-232 7-109 (182)
356 3s96_B 3B5H10 FAB light chain; 99.0 8.9E-10 3.1E-14 85.0 9.2 95 132-229 2-118 (218)
357 2xqy_G A13-D6.3 monoclonal ant 99.0 5.5E-10 1.9E-14 89.5 8.2 127 81-216 85-215 (261)
358 1iga_A IGA1; immunoglobulin; N 99.0 3.3E-09 1.1E-13 91.8 13.7 139 82-225 81-225 (475)
359 3q0h_A T cell immunoreceptor w 99.0 2E-09 6.7E-14 75.6 10.0 91 138-233 10-114 (117)
360 3sob_L Antibody light chain; b 99.0 2.2E-09 7.5E-14 83.8 11.3 97 130-228 23-132 (237)
361 1jbj_A CD3 epsilon and gamma e 99.0 3.2E-10 1.1E-14 86.0 6.1 73 142-229 10-83 (186)
362 2aw2_A B and T lymphocyte atte 99.0 6E-09 2.1E-13 69.8 11.3 86 140-227 20-110 (120)
363 4acp_A IG gamma-1 chain C regi 99.0 4.8E-10 1.6E-14 88.8 6.8 87 128-214 127-217 (240)
364 1bec_A 14.3.D T cell antigen r 99.0 1.1E-09 3.7E-14 86.2 8.8 130 81-214 72-211 (238)
365 2wbj_D OB TCR; transmembrane, 99.0 2E-09 6.9E-14 86.7 10.4 130 82-216 101-246 (279)
366 3jz7_A MCAR, CAR, coxsackievir 99.0 1.2E-09 4E-14 83.7 8.6 91 137-232 6-125 (214)
367 2r15_A Myomesin-1; sarcomeric 99.0 1.1E-09 3.8E-14 83.9 8.3 79 144-226 15-94 (212)
368 4f80_A Butyrophilin subfamily 99.0 8.6E-09 2.9E-13 80.1 13.4 89 138-229 11-121 (226)
369 3bkj_L WO2 IGG2A FAB fragment 99.0 2.6E-09 9E-14 84.6 10.5 97 130-228 33-147 (252)
370 3udw_C Poliovirus receptor; PV 99.0 1.7E-09 5.8E-14 75.2 8.3 87 138-229 7-118 (118)
371 1ow0_A IG alpha-1 chain C regi 99.0 2.9E-10 9.8E-15 88.2 4.7 87 128-215 103-200 (214)
372 1ccz_A Protein (CD58); LFA-3, 99.0 5.4E-10 1.9E-14 83.7 6.0 85 140-232 4-99 (171)
373 3qhz_H Human monoclonal antibo 99.0 9E-10 3.1E-14 86.3 7.4 138 82-226 84-228 (232)
374 1zvo_C Myeloma immunoglobulin 99.0 3.2E-08 1.1E-12 86.6 17.8 96 130-228 402-506 (512)
375 3sbw_C Programmed cell death 1 99.0 4.6E-09 1.6E-13 81.1 11.1 91 138-232 8-120 (222)
376 2q20_A VK1 O18/O8 germline lig 99.0 5.9E-09 2E-13 72.0 10.5 79 132-212 4-95 (109)
377 1hxm_B Gamma-delta T-cell rece 99.0 1.3E-09 4.3E-14 86.1 7.9 84 138-225 139-227 (242)
378 3esu_F Antibody 14B7* light ch 99.0 4.6E-09 1.6E-13 82.9 10.9 95 132-228 5-112 (250)
379 1b6u_A KIR2DL3, P58 killer cel 99.0 3.3E-09 1.1E-13 84.8 9.7 99 128-231 4-107 (257)
380 1q0x_L FAB 9B1, light chain; a 98.9 5E-09 1.7E-13 80.5 10.2 91 134-227 4-110 (212)
381 3s97_C Contactin-1; carbonic a 98.9 2.1E-09 7.2E-14 81.5 8.0 77 137-217 14-93 (201)
382 2znx_A SCFV; fluorotryptohpan, 98.9 5.4E-09 1.8E-13 82.4 10.6 95 133-229 3-110 (242)
383 3bn9_D E2 FAB heavy chain; ant 98.9 2.5E-09 8.6E-14 85.5 8.5 131 82-216 80-220 (257)
384 2pet_A Lutheran blood group gl 98.9 1.2E-09 4.1E-14 84.9 6.4 91 137-232 6-119 (231)
385 1oga_E TRBC1, T-cell receptor 98.9 2.9E-09 9.8E-14 84.5 8.6 127 82-216 77-219 (252)
386 2e27_L Anti-ciguatoxin antibod 98.9 9.7E-09 3.3E-13 72.2 10.2 78 133-212 5-95 (119)
387 3tv3_H PGT128 heavy chain, IG 98.9 1.4E-09 4.7E-14 85.8 6.4 139 81-225 86-235 (239)
388 1dr9_A B7-1 (CD80), T lymphocy 98.9 2.3E-09 7.8E-14 81.7 7.3 89 140-232 3-111 (201)
389 1moe_A Anti-CEA MAB T84.66; an 98.9 6.6E-09 2.3E-13 81.4 10.1 94 134-229 4-114 (240)
390 1qfw_M FV, antibody (anti beta 98.9 5.8E-09 2E-13 71.9 8.5 79 134-213 4-94 (108)
391 1h5b_A Murine T cell receptor 98.9 1.2E-08 4.1E-13 70.8 10.0 79 135-214 5-95 (113)
392 3auv_A SC-DSFV derived from th 98.9 5.2E-09 1.8E-13 84.2 9.1 97 131-229 12-121 (276)
393 2ywz_A NEW antigen receptor va 98.9 1.5E-08 5E-13 70.3 10.1 78 134-212 3-88 (111)
394 1i8k_A Epidermal growth factor 98.9 1.1E-08 3.7E-13 70.4 9.4 78 134-213 4-94 (107)
395 2x1w_L Vascular endothelial gr 98.9 1.4E-09 4.8E-14 84.0 5.3 83 138-227 14-101 (213)
396 3mtr_A N-CAM-1, NCAM-1, neural 98.9 4.9E-09 1.7E-13 80.9 8.3 146 61-229 45-211 (215)
397 4gos_A V-SET domain-containing 98.9 9.7E-09 3.3E-13 72.9 9.0 83 138-225 12-118 (125)
398 1xt5_A Variable region-contain 98.9 5.5E-09 1.9E-13 74.7 7.8 90 134-228 7-134 (135)
399 3pv7_A B7-H6, IG-like domain-c 98.9 1.5E-08 5.2E-13 79.8 10.9 89 137-230 9-121 (248)
400 3tv3_L PGT128 light chain, IG 98.9 7.7E-09 2.7E-13 79.4 8.9 84 140-227 9-106 (211)
401 1zvo_C Myeloma immunoglobulin 98.9 1.4E-08 4.9E-13 88.9 11.4 87 130-216 295-387 (512)
402 4fmk_A Poliovirus receptor-rel 98.9 4.1E-09 1.4E-13 80.9 7.0 86 139-228 9-121 (225)
403 4ffy_L DENV1-E111 single chain 98.9 8.4E-09 2.9E-13 73.2 7.9 98 133-232 3-117 (126)
404 1l6x_A Immunoglobulin gamma-1 98.9 3.9E-09 1.3E-13 81.2 6.6 84 132-216 2-94 (207)
405 3omz_A Human vdelta1 gamma del 98.9 5.8E-09 2E-13 82.9 7.8 97 131-229 2-120 (259)
406 3b5h_A Cervical EMMPRIN, HAB18 98.8 2E-08 6.8E-13 75.3 10.1 76 141-230 8-85 (184)
407 1svz_A Immunoglobulin;, single 98.8 8.6E-09 2.9E-13 81.2 8.4 94 134-229 4-115 (247)
408 1mq8_A ICAM-1, intercellular a 98.8 3E-09 1E-13 86.5 5.6 153 65-230 120-285 (291)
409 4frw_A Poliovirus receptor-rel 98.8 2.2E-08 7.5E-13 76.4 10.2 88 137-228 5-117 (218)
410 4dzb_B Vbeta2 (MAIT T cell rec 98.8 1.7E-08 5.9E-13 79.4 9.8 93 133-227 3-117 (246)
411 3u2s_H PG9 heavy chain; greek 98.8 6.9E-09 2.3E-13 82.4 7.4 141 81-226 78-237 (248)
412 3bqu_C 3H6 FAB light chain; be 98.8 8E-10 2.7E-14 86.3 1.7 98 130-227 22-130 (233)
413 1neu_A Myelin P0 protein; stru 98.8 2.3E-08 7.9E-13 70.2 8.9 90 137-230 5-122 (124)
414 3nfj_J T cell receptor beta ch 98.8 2E-08 6.8E-13 79.0 9.5 92 134-227 4-116 (245)
415 2coq_A NEW antigen receptor va 98.8 2.1E-08 7.1E-13 69.1 8.5 77 134-211 3-87 (108)
416 1i3g_L Antibody FV fragment; a 98.8 3.2E-08 1.1E-12 68.5 9.5 79 132-212 5-96 (111)
417 2d9q_B Granulocyte colony-stim 98.8 3.5E-09 1.2E-13 86.8 5.2 93 138-234 7-104 (313)
418 2d9c_A Signal-regulatory prote 98.8 3.9E-08 1.3E-12 70.6 10.2 102 132-233 9-127 (136)
419 1i1r_A GP130, interleukin-6 re 98.8 3.5E-08 1.2E-12 80.3 11.0 92 136-234 9-109 (303)
420 2edo_A CD48 antigen; beta-sand 98.8 5E-09 1.7E-13 73.9 5.1 92 140-235 13-118 (121)
421 2gjj_A A21 single-chain antibo 98.8 1.8E-08 6.2E-13 80.6 9.0 98 130-229 4-120 (264)
422 2zg1_A Sialic acid-binding IG- 98.8 2.7E-08 9.2E-13 76.3 9.6 92 136-231 5-126 (214)
423 2rgs_A I, IG gamma-2B heavy ch 98.8 3.2E-09 1.1E-13 82.4 4.4 87 130-216 8-102 (218)
424 2or8_A Hepatitis A virus cellu 98.8 4.2E-08 1.4E-12 68.1 9.7 91 138-230 4-114 (116)
425 2p1y_A Bispecific alpha/beta T 98.8 2.1E-08 7.3E-13 78.3 9.1 93 134-229 3-116 (238)
426 1nfd_E H57 FAB; complex (immun 98.8 1.3E-08 4.6E-13 78.1 7.7 88 138-227 6-108 (212)
427 2yc1_B Single chain antibody f 98.8 5.7E-08 2E-12 70.8 10.5 97 131-229 16-125 (146)
428 2dru_A Chimera of CD48 antigen 98.8 3.4E-08 1.2E-12 74.5 9.5 88 139-232 7-109 (180)
429 3o3u_N Maltose-binding peripla 98.8 6.8E-09 2.3E-13 91.9 6.5 89 140-232 375-474 (581)
430 3n9g_H FAB fragment of MAB CR4 98.8 1.5E-08 5.1E-13 79.3 7.5 140 81-227 79-225 (230)
431 3shs_A HOC head outer capsid p 98.8 1.9E-07 6.4E-12 74.1 13.6 136 64-225 36-181 (304)
432 2xzc_L FAB A.17 light chain; i 98.8 2.7E-08 9.2E-13 76.6 8.8 89 138-228 7-111 (216)
433 3moq_A NEW antigen receptor va 98.8 5.3E-08 1.8E-12 69.2 9.4 81 133-214 2-90 (126)
434 1n26_A IL-6 receptor alpha cha 98.8 8.6E-09 2.9E-13 85.0 6.0 88 136-233 11-99 (325)
435 1c1e_H Catalytic antibody 1E9 98.8 6.4E-08 2.2E-12 74.7 10.6 88 138-227 7-119 (219)
436 2oyp_A Hepatitis A virus cellu 98.8 1.7E-08 5.7E-13 69.2 6.6 82 140-226 3-107 (109)
437 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.8 5.5E-08 1.9E-12 77.2 10.5 94 132-227 4-116 (256)
438 2ghw_B Anti-SARS SCFV antibody 98.7 4.3E-08 1.5E-12 77.1 9.6 88 139-228 10-120 (247)
439 1zox_A CLM-1; IG-superfamily, 98.7 1.6E-07 5.5E-12 64.9 11.3 89 138-229 8-112 (113)
440 1eeq_A Kappa-4 immunoglobulin 98.7 7.6E-08 2.6E-12 66.9 9.6 78 134-213 4-100 (114)
441 1iam_A ICAM-1, CD54, intercell 98.7 1.8E-07 6.3E-12 70.8 12.3 81 128-215 82-167 (185)
442 3mj6_A Junctional adhesion mol 98.7 2.5E-08 8.4E-13 79.3 7.9 92 131-226 5-121 (268)
443 1f3r_B FV antibody fragment; I 98.7 4.9E-08 1.7E-12 77.5 9.6 90 138-229 7-125 (257)
444 2ptt_A CD48 antigen; CD244, CD 98.7 4.6E-08 1.6E-12 67.4 7.9 85 138-228 10-109 (110)
445 2vol_A Murine IGG FC; FC, zinc 98.7 7.2E-09 2.5E-13 79.7 4.1 82 135-216 6-94 (207)
446 3juy_B 3B3 single chain varian 98.7 7E-08 2.4E-12 76.4 10.1 98 130-229 5-135 (256)
447 3kgr_A LAIR-1, hlair1, leukocy 98.7 9.2E-08 3.1E-12 65.7 9.3 98 128-228 6-104 (106)
448 1j05_L T84.66 antibody, anti-C 98.7 6.5E-08 2.2E-12 66.8 8.5 77 134-212 4-97 (111)
449 4ei6_B Vbeta16 XV19 type II na 98.7 1.2E-07 4.2E-12 74.4 11.1 94 132-227 3-116 (245)
450 2jju_A Signal regulatory prote 98.7 4.1E-08 1.4E-12 69.7 7.4 96 134-233 6-122 (127)
451 1sq2_N Novel antigen receptor; 98.7 5.5E-08 1.9E-12 67.6 7.9 78 134-212 3-88 (113)
452 1ypz_F T-cell receptor gamma c 98.7 4.5E-08 1.6E-12 76.5 8.2 76 138-216 137-217 (230)
453 1x9q_A SCFV, 4M5.3 anti-fluore 98.7 2.3E-08 7.9E-13 79.9 6.6 97 130-228 14-128 (268)
454 3r0n_A Poliovirus receptor-rel 98.7 6.8E-08 2.3E-12 68.4 8.3 83 138-225 9-128 (128)
455 1nqb_A Single-chain antibody f 98.7 9.8E-08 3.3E-12 75.9 10.0 90 138-229 7-122 (256)
456 3q5y_A TCR N15 beta; IG, T cel 98.7 7.1E-08 2.4E-12 75.6 9.1 92 133-227 4-114 (240)
457 1qok_A MFE-23 recombinant anti 98.7 1.3E-07 4.4E-12 76.2 10.8 93 136-229 31-148 (282)
458 3u6r_L Antibody 1:7 (light cha 98.7 1.6E-07 5.6E-12 68.1 10.2 96 134-232 3-111 (143)
459 2ny1_B T-cell surface glycopro 98.7 1.6E-08 5.4E-13 76.0 4.9 72 140-215 4-93 (184)
460 3uzq_A Anti-dengue MAB 4E11; d 98.7 5E-08 1.7E-12 77.2 8.0 93 135-227 5-117 (253)
461 4esk_A LAIR-1, mlair1, leukocy 98.7 3.3E-07 1.1E-11 62.5 10.9 89 129-227 7-101 (102)
462 2q87_A CMRF35-H antigen; all-b 98.7 7.1E-08 2.4E-12 66.5 7.7 85 139-225 4-106 (110)
463 1pew_A JTO2, A lambda-6 type i 98.7 6.9E-08 2.4E-12 66.5 7.6 74 138-212 7-94 (109)
464 3gkz_A Anti-methamphetamine si 98.7 1.8E-07 6.1E-12 74.1 10.9 95 134-228 11-127 (257)
465 1pz5_B Heavy chain of FAB (SYA 98.7 2.4E-07 8.4E-12 71.5 11.4 88 138-227 7-120 (220)
466 1dlf_L Anti-dansyl immunoglobu 98.7 2.7E-07 9.3E-12 63.9 10.5 78 134-213 4-99 (113)
467 3rrq_A Protein PD-1, programme 98.7 8.2E-08 2.8E-12 68.4 7.9 94 136-229 6-117 (129)
468 2j6e_L IGM, FAB light chain; a 98.7 2.3E-08 7.9E-13 77.9 5.4 93 132-227 21-130 (234)
469 1mju_H Immunoglobulin MS6-12; 98.7 2.6E-07 9.1E-12 71.9 11.4 89 137-227 6-116 (227)
470 3ux9_B SCFV antibody; five hel 98.7 6.9E-08 2.4E-12 76.4 8.1 90 138-229 9-115 (256)
471 4gjt_B Poliovirus receptor-rel 98.6 1.3E-07 4.3E-12 66.7 8.4 86 138-228 7-118 (123)
472 3sob_H Antibody heavy chain, l 98.6 1.3E-07 4.5E-12 75.0 9.1 138 82-226 103-250 (256)
473 1ncn_A T lymphocyte activation 98.6 1.4E-07 4.9E-12 64.8 8.1 74 140-217 3-96 (110)
474 3qib_D 2B4 beta chain; IG doma 98.6 2.2E-07 7.7E-12 74.1 10.2 93 132-227 28-141 (270)
475 2wbj_D OB TCR; transmembrane, 98.6 1.9E-07 6.4E-12 75.1 9.7 97 131-227 24-142 (279)
476 1oaq_L Light chain; antibody, 98.6 1.8E-07 6.2E-12 65.6 8.4 89 140-230 9-113 (120)
477 3kg5_A B-cell antigen receptor 98.6 4.2E-07 1.4E-11 65.2 10.3 98 134-233 21-125 (134)
478 1op3_H FAB 2G12, heavy chain; 98.6 2.5E-07 8.4E-12 71.9 9.9 88 138-227 7-123 (225)
479 3d9a_H Heavy chain of hyhel10 98.6 1.3E-07 4.5E-12 72.5 8.1 86 138-227 7-113 (210)
480 4ety_A LAIR-1, mlair1, leukocy 98.6 1.1E-06 3.7E-11 61.5 11.9 90 129-228 7-102 (118)
481 4i0k_A CD276 antigen; immunogl 98.6 1.1E-08 3.6E-13 79.1 1.6 87 139-231 3-111 (222)
482 1ypz_E T cell receptor delta, 98.6 1.5E-07 5.2E-12 72.4 8.2 64 149-217 135-200 (207)
483 1q9r_B S25-2 FAB (IGG1K) heavy 98.6 2.2E-07 7.6E-12 71.8 9.0 87 138-227 7-122 (222)
484 1hxm_B Gamma-delta T-cell rece 98.6 8.4E-07 2.9E-11 69.7 12.5 96 133-228 3-124 (242)
485 1sy6_A T-cell surface glycopro 98.6 5.4E-08 1.8E-12 74.8 5.4 56 144-212 16-71 (204)
486 2or7_A T-cell immunoglobulin a 98.6 3.2E-07 1.1E-11 63.6 8.8 90 138-230 4-113 (115)
487 1mq8_A ICAM-1, intercellular a 98.6 1.3E-07 4.4E-12 76.9 7.7 82 141-229 96-188 (291)
488 1olz_A Semaphorin 4D; developm 98.6 4E-08 1.4E-12 88.2 5.1 87 139-232 541-632 (663)
489 1u3h_A T-cell receptor alpha-c 98.0 6.5E-09 2.2E-13 71.9 0.0 76 137-212 5-93 (110)
490 2nms_A CMRF35-like-molecule 1; 98.6 8.1E-07 2.8E-11 62.7 10.9 97 138-237 9-121 (124)
491 2fbj_H IGA-kappa J539 FAB (hea 98.6 6.3E-07 2.2E-11 69.4 11.3 91 138-228 7-119 (220)
492 1ntl_A CRRY-IG; immunology, co 98.6 6.9E-07 2.4E-11 78.9 12.7 87 128-215 446-537 (551)
493 2w59_A IGY FCU3-4; immunoglobu 98.6 5.8E-08 2E-12 76.0 5.2 86 130-216 11-103 (231)
494 3pl6_D MBP peptide / T-cell re 98.6 3.8E-07 1.3E-11 72.6 10.1 93 131-227 26-138 (268)
495 3nl4_H Antigen binding fragmen 98.6 6.6E-07 2.2E-11 68.8 11.0 89 137-226 5-114 (215)
496 3f8u_B Tapasin; endoplasmic re 98.5 6.4E-07 2.2E-11 75.5 11.4 108 106-213 266-388 (401)
497 1i1c_A IGG2A, IG gamma-2A chai 98.5 3.1E-08 1.1E-12 78.1 3.3 86 131-216 15-108 (239)
498 3mlr_H Human monoclonal anti-H 98.5 9.8E-08 3.4E-12 74.4 6.0 131 81-217 79-217 (226)
499 2yz1_A Tyrosine-protein phosph 98.5 2.5E-07 8.5E-12 64.7 7.3 77 133-213 9-101 (120)
500 1c5d_H Monoclonal antibody aga 98.5 3.1E-07 1.1E-11 70.8 8.1 88 138-227 7-117 (215)
No 1
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.84 E-value=1.9e-20 Score=145.76 Aligned_cols=156 Identities=16% Similarity=0.179 Sum_probs=106.6
Q ss_pred cCCCccEEEecccccccc-----------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCC-cceecce---
Q psy18191 60 FYPKPICLRFQDLLPQSK-----------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPS-LPLFPGV--- 124 (238)
Q Consensus 60 ~~~~~~~~w~~~~~~~~~-----------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~-~~~~~~~--- 124 (238)
..|.|.+.|++++.++.. .|...|.+.++.++|+|.|+|.+.+ |.......... ......+
T Consensus 29 ~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N----g~a~~~~~~~~~~~~~~~~~~~ 104 (207)
T 3rbs_A 29 LSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD----GKATNHSTVVLVGDVFKKLQKE 104 (207)
T ss_dssp CCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE----TTEEEEEEEEECTHHHHHHHHH
T ss_pred CCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC----CCeEEEEEEEEEccchhhhccc
Confidence 357889999999986632 2445788999999999999987665 11111110000 0000000
Q ss_pred -ecC-----CccCCEEEeCCCceEEeCCCcEEEEEEEeee-CCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCC
Q psy18191 125 -HGD-----GYRVPRITEHPASAVVPRHEPTTLNCKADGY-PEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGK 197 (238)
Q Consensus 125 -~~~-----v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v 197 (238)
... ...+|.|...+ +..+.+|+++.|.|.+.|. |.|.++|+|+|..+..+ .++....+... +.|..+
T Consensus 105 ~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~---~~~~~~~~~~~--L~I~~v 178 (207)
T 3rbs_A 105 AEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD---EKHDFKDGICT--LLITEF 178 (207)
T ss_dssp HHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCC---CCCCCSSEEEE--EEETTC
T ss_pred ccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCC---CceEcCCCEEE--EEECCC
Confidence 000 01378887655 4788999999999999999 99999999999998753 12222233222 237888
Q ss_pred CCCCCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 198 KDTDSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
..+|+|.|+|.|.|.+|...+ .+.|.++
T Consensus 179 ~~~D~G~Y~C~a~N~~G~~~~-~~~L~~~ 206 (207)
T 3rbs_A 179 SKKDAGIYEVILKDDRGKDKS-RLKLVDE 206 (207)
T ss_dssp CGGGCEEEEEEEEETTEEEEE-EEEECCC
T ss_pred CcccCEEEEEEEEcCCCEEEE-EEEEecC
Confidence 999999999999999999975 8888754
No 2
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.83 E-value=1.7e-20 Score=145.64 Aligned_cols=143 Identities=15% Similarity=0.146 Sum_probs=97.5
Q ss_pred CCCccEEEecccccccc--------------------------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeC
Q psy18191 61 YPKPICLRFQDLLPQSK--------------------------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYH 114 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~--------------------------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~ 114 (238)
.|.+.+.|||++..... .+...|.|.++..+|+|.|+|.+.+. .|...+
T Consensus 23 ~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~--~g~~~~--- 97 (203)
T 4fa8_A 23 GPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLCRMKLG--ETEVTK--- 97 (203)
T ss_dssp STTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEET--TEEEEE---
T ss_pred CCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeEEEEEEEcC--CCcEEE---
Confidence 56788999998642211 11235778888899999999876653 222111
Q ss_pred CCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeecc--CCccEEEecCCcEEEEE
Q psy18191 115 PPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAE--IGSHRILLPAGSLFFLS 192 (238)
Q Consensus 115 ~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~--~~~~~~~~~~~~l~~~~ 192 (238)
.+.+.+..||.+...+....+.+|+++.|.|.+.|.|.|.++|++++..+... ...+.....+|++.++.
T Consensus 98 --------~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~ 169 (203)
T 4fa8_A 98 --------QEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAV 169 (203)
T ss_dssp --------EEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEE
T ss_pred --------EEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEE
Confidence 12223456788877777788899999999999999999999999876544321 12233445677776653
Q ss_pred eecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 193 LVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 193 vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
|..+..+|+|.|+|.|.|.+|+++
T Consensus 170 -i~~v~~~D~G~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 170 -DLSLPKPWHLPVTCVGKNDKEEAH 193 (203)
T ss_dssp -EEEECSSCCCCEEEEEESSSCEEE
T ss_pred -ECCCCHHHCEEEEEEEEcCCCEEE
Confidence 345589999999999999999986
No 3
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.82 E-value=1.8e-19 Score=139.97 Aligned_cols=160 Identities=24% Similarity=0.314 Sum_probs=110.6
Q ss_pred CCCccEEEecccccccc-----------ceEEEEEcCCCCC-CCCCceEEEeCCCcccCC-ceEEeCCCCcceecceec-
Q psy18191 61 YPKPICLRFQDLLPQSK-----------QGLMYLVGSQASP-DYPNRFSLCNNKTWQKGL-PLKKYHPPSLPLFPGVHG- 126 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~-----------~g~~~l~~~~~~~-~~~g~y~~~~~~~~~~G~-y~c~~~~~~~~~~~~~~~- 126 (238)
.+.+.+.|++++..+.. .+...|.+.++.. .|+|.|+|.+.+.. |. .... ..+.....
T Consensus 33 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~--g~~~~~~------~~l~V~~~~ 104 (212)
T 2yd1_A 33 DPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGV--GDAVSAD------ATLTIYEGD 104 (212)
T ss_dssp SSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSS--SCEEEEE------EEEEEECTT
T ss_pred CCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCC--CCeEEee------EEEEEeccc
Confidence 45668999999875531 1224677888888 89999998876632 22 1111 01110000
Q ss_pred -CCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEE
Q psy18191 127 -DGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 127 -~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
....+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+... ..+....++.|. |..+..+|+|.|
T Consensus 105 ~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~L~----i~~v~~~d~G~Y 178 (212)
T 2yd1_A 105 KTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMS--NPRYSLKDGFLQ----IENSREEDQGKY 178 (212)
T ss_dssp CSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTT--STTEEEETTEEE----ECSCCGGGCEEE
T ss_pred CCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccC--CCeEEccCCeEE----EccCChhhCEEE
Confidence 0112388888888888999999999999999999999999999988753 222334466665 556699999999
Q ss_pred EEEEEeCCCceeEEEEEEEEccCCCCCCC
Q psy18191 206 WCVARNELGFARSKNATLDVAGKISTATD 234 (238)
Q Consensus 206 ~C~a~N~~G~~~s~~~~L~V~~~~~~~~~ 234 (238)
+|.|.|..|...+..+.|.|......+..
T Consensus 179 ~C~a~N~~G~~~s~~~~l~V~~~~~~~~~ 207 (212)
T 2yd1_A 179 ECVAENSMGTEHSKATNLYVKVRRVGTKH 207 (212)
T ss_dssp EEEEEETTEEEECCCEEEEEEC---C---
T ss_pred EEEeecCCCceeEEEEEEEEEeccccccc
Confidence 99999999999754589999887655443
No 4
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.81 E-value=3.4e-19 Score=124.25 Aligned_cols=97 Identities=28% Similarity=0.364 Sum_probs=78.0
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..||.|...|.++.+.+|+++.|.|.+.|.|.|.++|+++|..|..+ .+.....++.... +.|..+..+|+|.|+|.
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~--~~~~~~~~~~~~~-L~I~~v~~~D~G~Y~C~ 87 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS--ERLSFPADGAEHG-LLLTAALPTDAGVYVCR 87 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEECCEETTEEE-EEESSCCGGGCEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccce--eeEEEeecCceEE-EEEecCChhhCEEEEEE
Confidence 36899999999999999999999999999999999999999998753 2222222332222 23788899999999999
Q ss_pred EEeCCCceeEEEEEEEEccCC
Q psy18191 209 ARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.|.+|...+ .+.|.|..+|
T Consensus 88 a~N~~G~~~~-~~~l~V~~pP 107 (107)
T 3knb_B 88 ARNAAGEAYA-AAAVTVLEPP 107 (107)
T ss_dssp EEETTEEEEE-EEEEEEEC--
T ss_pred EEECCCEEEE-EEEEEEEcCC
Confidence 9999999974 9999998764
No 5
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.81 E-value=5.9e-19 Score=156.80 Aligned_cols=153 Identities=16% Similarity=0.222 Sum_probs=113.9
Q ss_pred CCCccEEEeccccccccce---------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccC
Q psy18191 61 YPKPICLRFQDLLPQSKQG---------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRV 131 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g---------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~ 131 (238)
.|.+.+.|++++..+.... ...|.+.++..+|+|.|+|.+.|.. |.... ...+.+..+
T Consensus 318 ~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~--g~~~~-----------~~~l~V~~~ 384 (570)
T 3b43_A 318 SPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAA--GSASS-----------STSLKVKEP 384 (570)
T ss_dssp SSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTT--BCCEE-----------EEEECEECC
T ss_pred CCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCC--CEEEE-----------EEEEEecCC
Confidence 4578899999987654321 2357778888999999998877642 32211 223335678
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
|.+...|....+.+|+++.|.|.+.|.|.|.+.|+++|..+... ....+ ..++.+..+ .|..+..+|+|.|+|.|.|
T Consensus 385 P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~-~~~~~-~~~~~~~~L-~i~~v~~~D~G~Y~C~A~N 461 (570)
T 3b43_A 385 PVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSG-KKYKI-MSENFLTSI-HILNVDSADIGEYQCKASN 461 (570)
T ss_dssp CEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSS-SSEEE-EEETTEEEE-EECSCCGGGCEEEEEEEEC
T ss_pred CeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCC-CCEEE-EEcCCEEEE-EECCCChhhCEEEEEEEEE
Confidence 99988888889999999999999999999999999999988753 22222 223322222 2677899999999999999
Q ss_pred CCCceeEEEEEEEEccCCC
Q psy18191 212 ELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 212 ~~G~~~s~~~~L~V~~~~~ 230 (238)
.+|... ..+.|.|..+|.
T Consensus 462 ~~G~~~-~~~~l~v~~~P~ 479 (570)
T 3b43_A 462 DVGSDT-CVGSITLKAPPR 479 (570)
T ss_dssp SSCEEE-EEEEEEECCCCE
T ss_pred CCCeEE-EEEEEEeccCCc
Confidence 999997 488999877653
No 6
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.81 E-value=1.9e-19 Score=152.32 Aligned_cols=146 Identities=24% Similarity=0.336 Sum_probs=108.9
Q ss_pred CCCccEEEecc-ccccccce-----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEE
Q psy18191 61 YPKPICLRFQD-LLPQSKQG-----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRI 134 (238)
Q Consensus 61 ~~~~~~~w~~~-~~~~~~~g-----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i 134 (238)
.|.|.+.|+++ +.++.... ...|.+.++..+|+|.|+|.+.|.. |.. .....+.+..+|.+
T Consensus 232 ~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~--G~~-----------~~~~~l~v~~~P~~ 298 (384)
T 3kld_A 232 NPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSR--GKN-----------VAKGQLTFYAQPNW 298 (384)
T ss_dssp ESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETT--EEE-----------EEEEEEEEEEEEEE
T ss_pred cCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCC--CeE-----------EEEEEEEEecCCcc
Confidence 45788999984 43433211 1257788888889999998776643 211 11122234568888
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
...+.+..+.+|+++.|.|.+.|.|.|.++|+++|..+... .++...++.|. |..+..+|+|.|+|.|.|.+|
T Consensus 299 ~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~---~~~~~~~~~L~----i~~v~~~D~G~Y~C~A~N~~G 371 (384)
T 3kld_A 299 VQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTR---DRIQIEQGTLN----ITIVNLSDAGMYQCVAENKHG 371 (384)
T ss_dssp EECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCB---TTEEEETTEEE----ESSCCGGGCEEEEEEEEETTE
T ss_pred ccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCC---ccEEEeCCEEE----EeecChhhCEEEEEEEEeCCc
Confidence 88888899999999999999999999999999999988642 23345567666 566699999999999999999
Q ss_pred ceeEEEEEEEEcc
Q psy18191 215 FARSKNATLDVAG 227 (238)
Q Consensus 215 ~~~s~~~~L~V~~ 227 (238)
...+ .+.|.|..
T Consensus 372 ~~~~-~a~L~V~~ 383 (384)
T 3kld_A 372 VIFS-SAELSVIA 383 (384)
T ss_dssp EEEE-EEEEEEC-
T ss_pred eEEe-ceEEEEec
Confidence 9975 99999864
No 7
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.81 E-value=5.5e-19 Score=156.98 Aligned_cols=150 Identities=15% Similarity=0.117 Sum_probs=111.5
Q ss_pred CCCccEEEeccccccccce---------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccC
Q psy18191 61 YPKPICLRFQDLLPQSKQG---------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRV 131 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g---------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~ 131 (238)
.|.|.+.|++++.++.... ...|.+.++..+|+|.|+|.+.|. .|...|.+ .+.+..+
T Consensus 411 ~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~--~G~~~~~~-----------~l~v~~~ 477 (570)
T 3b43_A 411 TPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASND--VGSDTCVG-----------SITLKAP 477 (570)
T ss_dssp SSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECS--SCEEEEEE-----------EEEECCC
T ss_pred CCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEEC--CCeEEEEE-----------EEEeccC
Confidence 4578899999987654321 246778889999999999888774 34323321 1225579
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... .........+.... +.|..+..+|+|.|+|.|.|
T Consensus 478 P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~-L~i~~~~~~d~G~Y~C~a~N 555 (570)
T 3b43_A 478 PRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRE-SDNIWISYSENIAT-LQFSRAEPANAGKYTCQIKN 555 (570)
T ss_dssp CEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCC-TTTEEECCCSSEEE-EEESSCCTTCCEEEEEEEEC
T ss_pred CcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccC-CCeEEEEECCCEEE-EEECcCCHHHCEEEEEEEEE
Confidence 99999888888999999999999999999999999998766543 22222222222222 23678899999999999999
Q ss_pred CCCceeEEEEEEEEc
Q psy18191 212 ELGFARSKNATLDVA 226 (238)
Q Consensus 212 ~~G~~~s~~~~L~V~ 226 (238)
.+|...+ .+.|.|.
T Consensus 556 ~~G~~~~-~a~L~V~ 569 (570)
T 3b43_A 556 EAGTQEC-FATLSVL 569 (570)
T ss_dssp SSCEEEE-EEEECCB
T ss_pred CCcEEEE-EEEEEEe
Confidence 9999974 9999875
No 8
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.81 E-value=1.6e-18 Score=132.26 Aligned_cols=148 Identities=18% Similarity=0.220 Sum_probs=108.0
Q ss_pred CccEEEeccccccccce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCC
Q psy18191 63 KPICLRFQDLLPQSKQG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHP 138 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~ 138 (238)
.+.+.|++++..+.... ...|.+.++..+|+|.|+|.+.+. |.. ...+.+.+..+|.+...+
T Consensus 34 ~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~---~~~-----------~~~~~l~V~~~p~~~~~~ 99 (190)
T 2wv3_A 34 LMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV---SAP-----------KANATIEVKAAPDITGHK 99 (190)
T ss_dssp EEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET---TEE-----------EEEEEEEEECCCEEEEEC
T ss_pred ceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeC---Ccc-----------cccEEEEEecCCcccccC
Confidence 36899999988665432 357888899999999999877653 211 111222355789998888
Q ss_pred CceEEeCCCcEEEEEEEeeeCCCEEEEEe--CCEEeeccC-CccEEEecCCcEEEEEeecCCC-CCCCeEEEEEEEeCCC
Q psy18191 139 ASAVVPRHEPTTLNCKADGYPEPRIEWYK--DGSLVSAEI-GSHRILLPAGSLFFLSLVHGKK-DTDSGVYWCVARNELG 214 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P~p~i~W~~--~g~~l~~~~-~~~~~~~~~~~l~~~~vi~~v~-~~d~G~Y~C~a~N~~G 214 (238)
....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.... ........++... .+.|..+. .+|+|.|+|.|.|..|
T Consensus 100 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~-~L~i~~~~~~~d~G~Y~C~a~N~~g 178 (190)
T 2wv3_A 100 RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYT-ELNIVNLQITEDPGEYECNATNSIG 178 (190)
T ss_dssp SEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEE-EEEECSCCTTTSCEEEEEEEECSSC
T ss_pred CcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCee-EEEEEeccccCCCEEEEEEEEecCC
Confidence 88889999999999999999999999999 888775432 2222223333211 12267779 7999999999999999
Q ss_pred ceeEEEEEEEEc
Q psy18191 215 FARSKNATLDVA 226 (238)
Q Consensus 215 ~~~s~~~~L~V~ 226 (238)
... ..+.|.|.
T Consensus 179 ~~~-~~~~l~V~ 189 (190)
T 2wv3_A 179 SAS-VSTVLRVR 189 (190)
T ss_dssp EEE-EEEEEEEE
T ss_pred cce-eEEEEEEE
Confidence 996 58888875
No 9
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.81 E-value=6e-19 Score=137.10 Aligned_cols=162 Identities=25% Similarity=0.279 Sum_probs=105.6
Q ss_pred CCCccEEEeccccccccce----------EEEEEcCCC-CCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 61 YPKPICLRFQDLLPQSKQG----------LMYLVGSQA-SPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g----------~~~l~~~~~-~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
.+.+.+.|++++..+.... ...|.+.++ ...|+|.|+|.+.+.. |...... .+.+.... ....
T Consensus 33 ~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~--g~~~~~~---~l~V~~~~-~~~~ 106 (212)
T 2yd6_A 33 DPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNV--GEISVST---RLTVLRED-QIPR 106 (212)
T ss_dssp ESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETT--EEEEEEE---EEEEECGG-GCCT
T ss_pred CCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCC--CcEEEEE---EEEEeccC-ccCC
Confidence 3567899999987554321 234777888 5899999998776542 2111110 00010000 0012
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccE-EEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHR-ILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~-~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.......+ .....+... .+.|..+..+|+|.|+|.
T Consensus 107 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~-~L~i~~~~~~d~G~Y~C~ 185 (212)
T 2yd6_A 107 GFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIG-ALQIEQSEESDQGKYECV 185 (212)
T ss_dssp TCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEE-EEEECSCCGGGCEEEEEE
T ss_pred CcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeE-EEEEcCCCcccCEEEEEE
Confidence 347888888888899999999999999999999999999998875321112 222211111 122677799999999999
Q ss_pred EEeCCCceeEEEEEEEEccCC
Q psy18191 209 ARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.|.+|...+..+.|.|...+
T Consensus 186 a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 186 ATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EEETTEEEECCCEEEEEEC--
T ss_pred EECCCCccccccccEEEEecc
Confidence 999999987778888887654
No 10
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.80 E-value=1.6e-18 Score=132.28 Aligned_cols=150 Identities=23% Similarity=0.271 Sum_probs=106.8
Q ss_pred CCCccEEEeccccccccc-----------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 61 YPKPICLRFQDLLPQSKQ-----------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~-----------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
.+.+.+.|++++..+... +...|.+.++...|+|.|+|.+.+... ..... .........
T Consensus 32 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~--~~~~~--------~~l~v~~~~ 101 (194)
T 2a38_A 32 FPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSG--QATST--------AELLVKAET 101 (194)
T ss_dssp ESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTE--EEEEE--------EEEEEECCC
T ss_pred cCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCc--eEeEE--------EEEEEccCC
Confidence 346689999998754432 234688889999999999987755322 11111 111111123
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCC--cEEEEEeecCCCCCCCeEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAG--SLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~--~l~~~~vi~~v~~~d~G~Y~C 207 (238)
.+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+... ........++ .|.+..+ ..+|+|.|+|
T Consensus 102 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~L~i~~~----~~~d~G~Y~C 176 (194)
T 2a38_A 102 APPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSS-LDFQISQEGDLYSLLIAEA----YPEDSGTYSV 176 (194)
T ss_dssp EEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCS-SSEEEEEETTEEEEEEEEE----CGGGCEEEEE
T ss_pred CCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCC-CcEEEEEcCCEEEEEECCC----ChhcCeEEEE
Confidence 6788888888889999999999999999999999999999988753 2222222222 3554444 9999999999
Q ss_pred EEEeCCCceeEEEEEEEEc
Q psy18191 208 VARNELGFARSKNATLDVA 226 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~ 226 (238)
.|.|..|... ..+.|.|+
T Consensus 177 ~a~n~~g~~~-~~~~l~V~ 194 (194)
T 2a38_A 177 NATNSVGRAT-STAELLVQ 194 (194)
T ss_dssp EEEETTEEEE-EEEEEEEC
T ss_pred EEEeCCCceE-EEEEEEEC
Confidence 9999999986 48888874
No 11
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.80 E-value=3.6e-18 Score=132.06 Aligned_cols=162 Identities=15% Similarity=0.192 Sum_probs=108.0
Q ss_pred CCCccEEEeccccccccce---------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcce---------ec
Q psy18191 61 YPKPICLRFQDLLPQSKQG---------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPL---------FP 122 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g---------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~---------~~ 122 (238)
.+.+.+.|++++.++...+ ...|.+.++..+|+|.|+|.+.+.. |.....+....... ..
T Consensus 30 ~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~--~~~~~~~~l~v~~~~~~~~~~~~~~ 107 (212)
T 2r15_A 30 VEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGK--TGHQKTVDLSGQAYDEAYAEFQRLK 107 (212)
T ss_dssp CSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSS--CEEEEEEEECHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCC--cceEEEEEEEEeeccchhhhccccC
Confidence 4578899999988654422 2458888999999999998876632 22111110000000 00
Q ss_pred -ceecCCccCCEEE-eCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCC
Q psy18191 123 -GVHGDGYRVPRIT-EHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 123 -~~~~~v~~~P~i~-~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~ 200 (238)
.... ...+|.+. ..+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ....+...++.... +.|..+..+
T Consensus 108 ~~~~~-~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~-L~i~~~~~~ 184 (212)
T 2r15_A 108 QAAIA-EKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQT-DHCNLKFEAGRTAY-FTINGVSTA 184 (212)
T ss_dssp HHHHH-HHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCC-SSEEEEEETTTEEE-EEESSCCGG
T ss_pred ccccc-ccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccC-CCEEEEEcCCCEEE-EEEcCcchH
Confidence 0000 11134444 4466788999999999999999999999999999998754 22233333232222 236788999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|+|.|+|.|.|..|... ..+.|.|..+
T Consensus 185 d~G~Y~C~a~N~~g~~~-~~~~l~V~~P 211 (212)
T 2r15_A 185 DSGKYGLVVKNKYGSET-SDFTVSVFIP 211 (212)
T ss_dssp GCEEEEEEEEETTEEEE-EEEEEEEECC
T ss_pred HCeEEEEEEEcCCCcEE-EEEEEEEEcc
Confidence 99999999999999996 5999998743
No 12
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.80 E-value=8.3e-19 Score=120.73 Aligned_cols=96 Identities=18% Similarity=0.339 Sum_probs=77.8
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.||.|...|.++.+.+|+++.|.|.+.|.|.|.+.|+++|..+......+......+.... +.|..++.+|+|.|+|.|
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~-L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTT-LIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEE-EEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEE-EEEcCCCccCCEEEEEEE
Confidence 5789988889999999999999999999999999999999998764222333333333222 237888999999999999
Q ss_pred EeCCCceeEEEEEEEEcc
Q psy18191 210 RNELGFARSKNATLDVAG 227 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~ 227 (238)
.|.+|... ..+.|.|++
T Consensus 83 ~N~~G~~~-~~~~l~V~~ 99 (100)
T 3knb_A 83 GNEFGSDS-ATVNIHIRS 99 (100)
T ss_dssp EETTEEEE-EEEEEEEEC
T ss_pred EECCCEEE-EEEEEEEEE
Confidence 99999996 599999875
No 13
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.80 E-value=7.7e-19 Score=150.85 Aligned_cols=150 Identities=11% Similarity=0.034 Sum_probs=99.8
Q ss_pred CCCccEEEeccccccccce---------------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee
Q psy18191 61 YPKPICLRFQDLLPQSKQG---------------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH 125 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g---------------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~ 125 (238)
.+.+.+.|++++..+.... ...|.+.++..+|+|.|+|.+.|. ....+.
T Consensus 255 ~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~----------------~~~~~~ 318 (423)
T 3qs7_E 255 NHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH----------------PSQSAL 318 (423)
T ss_dssp SSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE----------------EEEEEE
T ss_pred CCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC----------------CCceEE
Confidence 4467899999987553321 125888899999999999888773 111122
Q ss_pred cCCccCCEEEeCC--CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCe
Q psy18191 126 GDGYRVPRITEHP--ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 126 ~~v~~~P~i~~~~--~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G 203 (238)
+.+..+|.+...+ ....+.+|+++.|.|.+.|.|.|.++|+|+|..+..... . . .+.+.+. +.....+|+|
T Consensus 319 L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~---~-~-~~~~~~~--~~~~~~~D~G 391 (423)
T 3qs7_E 319 VTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQK---G-L-DNGYSIS--KFCNHKHQPG 391 (423)
T ss_dssp EEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCC---B-C-SSSSEEE--EECCCTTCCS
T ss_pred EEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccc---c-c-cCCcEEE--EEecccccCE
Confidence 2255677776654 346678899999999999999999999999999875310 0 0 0111211 1233778999
Q ss_pred EEEEEEEeCCCceeEEEEEEEEccCCCCCCC
Q psy18191 204 VYWCVARNELGFARSKNATLDVAGKISTATD 234 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~~~ 234 (238)
.|+|.|.|..|... .++.|.|...+..+..
T Consensus 392 ~YtC~A~N~~G~~~-~s~~L~v~~~p~~~~~ 421 (423)
T 3qs7_E 392 EYIFHAENDDAQFT-KMFTLNIRSGTKHHHH 421 (423)
T ss_dssp CEEEEEEETTEEEE-EEEEEC----------
T ss_pred EEEEEEEcCCceEE-EEEEEEEecCCccccc
Confidence 99999999999996 6999999998877653
No 14
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.79 E-value=3e-18 Score=138.47 Aligned_cols=150 Identities=15% Similarity=0.220 Sum_probs=109.8
Q ss_pred CCCccEEEeccccccccce---------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccC
Q psy18191 61 YPKPICLRFQDLLPQSKQG---------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRV 131 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g---------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~ 131 (238)
.|.+.+.|++++..+.... ...|.+.++..+|+|.|+|.+.+.. |.. ...+.+.+..+
T Consensus 126 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~--g~~-----------~~~~~l~V~~~ 192 (284)
T 2rik_A 126 SPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAA--GSA-----------SSSTSLKVKEP 192 (284)
T ss_dssp SSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSS--CEE-----------EEEEEEEEECC
T ss_pred eCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCC--Cce-----------eEEEEEEEecC
Confidence 3577899999987544321 2467788888899999998776642 211 11122235578
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .......++....+ .|..+..+|+|.|+|.|.|
T Consensus 193 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~L-~i~~v~~~d~G~Y~C~a~N 269 (284)
T 2rik_A 193 PVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSG--KKYKIMSENFLTSI-HILNVDSADIGEYQCKASN 269 (284)
T ss_dssp CBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBT--TTEEEEEETTEEEE-EECSCCGGGCEEEEEEEEE
T ss_pred CcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCC--CCEEEEEcCCEEEE-EEcCCCcccCEEEEEEEEe
Confidence 88877788888999999999999999999999999999988753 22222222322222 2677899999999999999
Q ss_pred CCCceeEEEEEEEEcc
Q psy18191 212 ELGFARSKNATLDVAG 227 (238)
Q Consensus 212 ~~G~~~s~~~~L~V~~ 227 (238)
..|... ..+.|.|.+
T Consensus 270 ~~G~~~-~~~~l~V~~ 284 (284)
T 2rik_A 270 DVGSYT-CVGSITLKA 284 (284)
T ss_dssp TTEEEE-EEEEEEECC
T ss_pred CCCcee-EEEEEEEcC
Confidence 999997 489998863
No 15
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.79 E-value=3.1e-18 Score=140.70 Aligned_cols=150 Identities=15% Similarity=0.111 Sum_probs=104.9
Q ss_pred cCCCccEEEeccccccccce------------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecC
Q psy18191 60 FYPKPICLRFQDLLPQSKQG------------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGD 127 (238)
Q Consensus 60 ~~~~~~~~w~~~~~~~~~~g------------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~ 127 (238)
..|.+.+.|++++..+.... ...|.+.....+|+|.|+|.+.+....+. ....+.+.
T Consensus 144 ~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~-----------~~~~~~l~ 212 (313)
T 4fqp_A 144 GRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKP-----------QLLTVNLT 212 (313)
T ss_dssp EBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSC-----------EEEEEECC
T ss_pred ccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCcc-----------ceeeeecc
Confidence 34578899999876443211 12355666667778888877665322111 11122334
Q ss_pred CccCCEEEeC-CCceEEeCCCcEEEEEEEeeeCCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEE
Q psy18191 128 GYRVPRITEH-PASAVVPRHEPTTLNCKADGYPEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 128 v~~~P~i~~~-~~~~~~~~G~~~~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
+..+|.+... +....+.+|+.+.|.|.+.|.|.| .|+|+++|..+... ....++.|. |..+..+|+|.|
T Consensus 213 V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~-----~~~~~~~L~----i~~v~~~d~G~Y 283 (313)
T 4fqp_A 213 VYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPF-----AVAQGAQLL----IRPVDKPINTTL 283 (313)
T ss_dssp BCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT-----EEEETTEEE----ECCCSSCCEEEE
T ss_pred cccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCc-----eEEeCCEEE----ECcCChhhCEEE
Confidence 6678887654 455667788999999999999999 69999999887632 223355565 566699999999
Q ss_pred EEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 206 WCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 206 ~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
+|.|.|.+|... ..+.|.|...|+
T Consensus 284 ~C~a~N~~G~~~-~~~~l~V~~~PP 307 (313)
T 4fqp_A 284 ICNVTNALGARQ-AELTVQVKEGPP 307 (313)
T ss_dssp EEEEECSSCEEE-EEEEEEEECCC-
T ss_pred EEEEEeCCCcEE-EEEEEEEEeCCC
Confidence 999999999996 599999987654
No 16
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.78 E-value=1.1e-18 Score=132.83 Aligned_cols=151 Identities=25% Similarity=0.319 Sum_probs=110.6
Q ss_pred CCCccEEEeccccccccc--eE------EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 61 YPKPICLRFQDLLPQSKQ--GL------MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~--g~------~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.+.|++++..+... .. ..|.+.++...|+|.|+|...+.. |... .....+.+..+|
T Consensus 34 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~--~~~~----------~~~~~l~v~~~p 101 (192)
T 2iep_A 34 YPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGV--GGAV----------ESCGALQVKMKP 101 (192)
T ss_dssp ESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSS--SCCE----------EEEEEEEEEEEE
T ss_pred CCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCC--Ccee----------EeEEEEEEEeCC
Confidence 456789999988754321 11 246778888889999998776532 2111 111122245678
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+... .......++.|. |..+..+|+|.|+|.|.|.
T Consensus 102 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~--~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a~n~ 175 (192)
T 2iep_A 102 KITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALREN--SRIAVLESGSLR----IHNVQKEDAGQYRCVAKNS 175 (192)
T ss_dssp EEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCC--SSEEECTTSCEE----ESSCCGGGCEEEEEEEEET
T ss_pred ccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCC--CcEEEecCCcEE----EecCChhhCEEEEEEEEcC
Confidence 8888888889999999999999999999999999999988753 333444566665 5666999999999999999
Q ss_pred CCceeEEEEEEEEccCC
Q psy18191 213 LGFARSKNATLDVAGKI 229 (238)
Q Consensus 213 ~G~~~s~~~~L~V~~~~ 229 (238)
.|...+..+.|.|..++
T Consensus 176 ~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 176 LGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp TEEEECCCEEEEEEC--
T ss_pred CCcEEEEEEEEEEEeCC
Confidence 99986667899887654
No 17
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.78 E-value=3.2e-18 Score=131.01 Aligned_cols=143 Identities=22% Similarity=0.285 Sum_probs=103.4
Q ss_pred CCCccEEEeccccccccce------------------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceec
Q psy18191 61 YPKPICLRFQDLLPQSKQG------------------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFP 122 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g------------------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~ 122 (238)
.+.+.+.|++++..+.... ...|.+.++...|+|.|+|.+.+... .. ...
T Consensus 30 ~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~------~~------~~~ 97 (195)
T 2c5d_C 30 GEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQ------TF------VSQ 97 (195)
T ss_dssp SSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTE------EE------ECC
T ss_pred CCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCC------ce------ecc
Confidence 4566899999988654431 13577788888888888877665321 10 011
Q ss_pred ceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCC
Q psy18191 123 GVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 123 ~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d 201 (238)
.+.+.+..+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+...... ...+.|. |..++ |
T Consensus 98 ~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~----~~~~~L~----i~~~~--d 167 (195)
T 2c5d_C 98 PGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH----GPQRSLH----VPGLN--K 167 (195)
T ss_dssp CEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS----SCCEEEE----ECCCS--S
T ss_pred cEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc----CCCCeEE----Ecccc--c
Confidence 122335678999888888999999999999999999999 99999999887653111 2233444 34434 8
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEE
Q psy18191 202 SGVYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
+|.|+|.|.|..|...+..+.|.|
T Consensus 168 ~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 168 TSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CceEEEEEEcCCCceEEEEEEEEE
Confidence 999999999999998646889988
No 18
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.78 E-value=4.4e-18 Score=129.54 Aligned_cols=147 Identities=18% Similarity=0.123 Sum_probs=106.1
Q ss_pred CCccEEEec-cccccccc-----------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 62 PKPICLRFQ-DLLPQSKQ-----------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 62 ~~~~~~w~~-~~~~~~~~-----------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
+.+.+.|++ ++..+... +...|.+.++..+|+|.|+|.+.+... + .....+.+.+.
T Consensus 31 ~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-~-----------~~~~~~~l~v~ 98 (191)
T 1epf_A 31 KDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDG-T-----------QSEATVNVKIF 98 (191)
T ss_dssp CCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTT-E-----------EEEEEEEEEEE
T ss_pred CCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCC-c-----------ceEEEEEEEee
Confidence 367899999 77644321 124677888999999999987665321 1 01112222355
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+............++.|. |..+..+|+|.|+|.|
T Consensus 99 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a 174 (191)
T 1epf_A 99 QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ----IRGIKKTDEGTYRCEG 174 (191)
T ss_dssp CCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEE----ETTCCGGGCEEEEEEE
T ss_pred cCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEE----ECCCChhhCEEEEEEE
Confidence 788888888888999999999999999999999999999999876534445555566665 6667999999999999
Q ss_pred EeCCCceeEEEEEEEE
Q psy18191 210 RNELGFARSKNATLDV 225 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V 225 (238)
.|..|... ....+.|
T Consensus 175 ~n~~~~~~-~~~~i~v 189 (191)
T 1epf_A 175 RILARGEI-NFKDIQV 189 (191)
T ss_dssp EEGGGTEE-EEEEEEE
T ss_pred EEecceeE-EEEEEEE
Confidence 99995443 2444443
No 19
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.78 E-value=1.1e-17 Score=141.52 Aligned_cols=149 Identities=16% Similarity=0.257 Sum_probs=111.6
Q ss_pred CCCccEEEeccccccccceE------EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEE
Q psy18191 61 YPKPICLRFQDLLPQSKQGL------MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRI 134 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g~------~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i 134 (238)
.|.+.+.|++++..+..... ..|.+.++..+|+|.|+|.+.+... . ....+.+.+..+|.+
T Consensus 249 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g--~-----------~~~~~~l~V~~~p~~ 315 (404)
T 3p3y_A 249 VPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMG--S-----------IRHTISVRVKAAPYW 315 (404)
T ss_dssp SSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSC--E-----------EEEEEEEEEEEEEEE
T ss_pred CCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCC--c-----------EEEEEEEEEeCCCee
Confidence 34678999998875543221 2567778888888888887766422 1 111222335578888
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
...+.+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+............++.|. |..+..+|+|.|+|.|.|..|
T Consensus 316 ~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~N~~G 391 (404)
T 3p3y_A 316 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTII----FRDTQISSRAVYQCNTSNEHG 391 (404)
T ss_dssp EECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEE----ESSCCSSCCCEEEEEEEETTE
T ss_pred eccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEE----EeecCHHHCEEEEEEEEeCCC
Confidence 8888889999999999999999999999999999999876432333344556555 566699999999999999999
Q ss_pred ceeEEEEEEEEcc
Q psy18191 215 FARSKNATLDVAG 227 (238)
Q Consensus 215 ~~~s~~~~L~V~~ 227 (238)
... ..+.|.|..
T Consensus 392 ~~~-~~~~l~V~d 403 (404)
T 3p3y_A 392 YLL-ANAFVSVLD 403 (404)
T ss_dssp EEE-EEEEEEEC-
T ss_pred cEE-EEEEEEEEe
Confidence 997 499998854
No 20
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.78 E-value=2e-18 Score=146.13 Aligned_cols=148 Identities=21% Similarity=0.305 Sum_probs=109.4
Q ss_pred CCccEEEeccccccccce--E-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEE
Q psy18191 62 PKPICLRFQDLLPQSKQG--L-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRI 134 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~g--~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i 134 (238)
+.+.+.|++++..+.... . ..|.+..+..+|+|.|+|.+.+... .....+.+.+..+|.+
T Consensus 249 p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-------------~~~~~~~l~V~~~p~~ 315 (403)
T 3laf_A 249 PPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNE-------------NISASAELTVLVPPWF 315 (403)
T ss_dssp SCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTE-------------EEEEEEEEEEEEEEEE
T ss_pred CCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCC-------------ceEEEEEEEEECCCcE
Confidence 467889999877543321 1 2466777888888888877655321 1111222335578888
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+... .......++.|. |..+..+|+|.|+|.|.|..|
T Consensus 316 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~--~~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~N~~G 389 (403)
T 3laf_A 316 LNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPS--DYFQIVGGSNLR----ILGVVKSDEGFYQCVAENEAG 389 (403)
T ss_dssp EECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCS--SSEEEETTTEEE----ESSCCGGGCEEEEEEEEETTE
T ss_pred eecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCC--CcEEEecCccEE----EeccccccCEEEEEEEEcCCc
Confidence 88888889999999999999999999999999999988642 333334456665 566699999999999999999
Q ss_pred ceeEEEEEEEEccCC
Q psy18191 215 FARSKNATLDVAGKI 229 (238)
Q Consensus 215 ~~~s~~~~L~V~~~~ 229 (238)
... ..+.|.|.+++
T Consensus 390 ~~~-~~~~l~V~~P~ 403 (403)
T 3laf_A 390 NAQ-SSAQLIVPKPA 403 (403)
T ss_dssp EEE-EEEEEECCCC-
T ss_pred eEE-EEEEEEEeCCC
Confidence 997 49999998764
No 21
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.78 E-value=8.4e-19 Score=143.56 Aligned_cols=150 Identities=17% Similarity=0.123 Sum_probs=107.4
Q ss_pred CCCccEEEeccccccccce----------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc
Q psy18191 61 YPKPICLRFQDLLPQSKQG----------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR 130 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g----------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~ 130 (238)
.|.+.+.|++++.++.... ...|.+.....+|+|.|+|.+.+....+... ..+.+.+..
T Consensus 142 ~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~-----------~~~~l~V~~ 210 (308)
T 4fom_A 142 KPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIR-----------YSFILDIQY 210 (308)
T ss_dssp BSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE-----------EEEECCCCE
T ss_pred cCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceE-----------EeEEEEEec
Confidence 4578899999987654322 2356777888889999998877643222111 112334667
Q ss_pred CCEEEeC-CCceEEeCCCcEEEEEEEeeeCCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 131 VPRITEH-PASAVVPRHEPTTLNCKADGYPEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 131 ~P~i~~~-~~~~~~~~G~~~~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
+|.+... .....+..|+.+.|.|.+.|.|.| .+.|+|++..+... ....++.+. +|..++.+|+|.|+|.
T Consensus 211 ~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~-----~~~~~~~~l---~i~~v~~~d~G~Y~C~ 282 (308)
T 4fom_A 211 APEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDG-----LLASDNTLH---FVHPLTFNYSGVYICK 282 (308)
T ss_dssp EEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSS-----CBCSTTEEE---CCSCCCSCCCSEEEEE
T ss_pred CCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCc-----EEEcCCeEE---EECCCChhhCEEEEEE
Confidence 7887654 345667788999999999999999 69999998777532 112233332 3677899999999999
Q ss_pred EEeCCCceeEEEEEEEEccCCC
Q psy18191 209 ARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
|.|.+|... ..+.|.|..+|.
T Consensus 283 A~N~~G~~~-~~~~l~V~~~P~ 303 (308)
T 4fom_A 283 VTNSLGQRS-DQKVIYISDPPH 303 (308)
T ss_dssp EEETTEEEE-EEEECCEECCC-
T ss_pred EEeCCCcEE-EEEEEEEEcCCC
Confidence 999999996 599999988764
No 22
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.77 E-value=8.7e-18 Score=128.53 Aligned_cols=149 Identities=20% Similarity=0.287 Sum_probs=102.2
Q ss_pred CCCccEEEeccccccccc-----------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 61 YPKPICLRFQDLLPQSKQ-----------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~-----------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
.+.+.+.|++++..+... +...|.+.++...|+|.|+|.+.+.. |.. ...+.+.+.
T Consensus 31 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~--g~~-----------~~~~~l~V~ 97 (197)
T 2j8h_A 31 HPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQG--GSV-----------SGTASLEVE 97 (197)
T ss_dssp SSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETT--EEE-----------EEEEEEEEE
T ss_pred cCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECC--Cce-----------eEEEEEEEc
Confidence 456789999998754332 12378888999999999998766532 211 111111133
Q ss_pred cCCEEEe-----CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecC-CCCCCCe
Q psy18191 130 RVPRITE-----HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHG-KKDTDSG 203 (238)
Q Consensus 130 ~~P~i~~-----~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~-v~~~d~G 203 (238)
.+|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ....+....+...+ .|.. +..+|+|
T Consensus 98 ~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~~L--~i~~~~~~~d~G 174 (197)
T 2j8h_A 98 VPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN-GHYQVIVTRSFTSL--VFPNGVERKDAG 174 (197)
T ss_dssp EEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSS-SSCEEEECSSEEEE--ECTTCCCGGGCE
T ss_pred CCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecC-CCEEEEEcCCceEE--EEeCCCCcccCE
Confidence 4444432 224567889999999999999999999999999988743 22222222222222 2667 8999999
Q ss_pred EEEEEEEeCCCceeEEEEEEEEc
Q psy18191 204 VYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
.|+|.|.|..|... ..+.|.|.
T Consensus 175 ~Y~C~a~N~~g~~~-~~~~l~V~ 196 (197)
T 2j8h_A 175 FYVVCAKNRFGIDQ-KTVELDVA 196 (197)
T ss_dssp EEEEEEEETTEEEE-EEEEEEEE
T ss_pred eEEEEEEeCCCcEe-EEEEEEEe
Confidence 99999999999986 59999885
No 23
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.77 E-value=3.7e-18 Score=130.70 Aligned_cols=156 Identities=17% Similarity=0.116 Sum_probs=107.6
Q ss_pred CCC-ccEEEecccccccc--ce-------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc
Q psy18191 61 YPK-PICLRFQDLLPQSK--QG-------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR 130 (238)
Q Consensus 61 ~~~-~~~~w~~~~~~~~~--~g-------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~ 130 (238)
.+. +.+.|++++..+.. .+ ...|.+.++..+|+|.|+|...+... ..........+ ...........
T Consensus 36 ~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~ 112 (201)
T 3s97_C 36 FPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSI--TKSVFSKFIPL-IPIPERTTKPY 112 (201)
T ss_dssp ESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGG--TEEEECCCEEE-EEECCSSCCCE
T ss_pred CCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCC--Ccchhhcccce-eeccccccCCC
Confidence 345 88999998875421 11 13477788899999999987665321 11111000000 00001111335
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .......++.|. |..+..+|+|.|+|.|.
T Consensus 113 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~---~~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~ 185 (201)
T 3s97_C 113 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPS---TAEISTSGAVLK----IFNIQLEDEGIYECEAE 185 (201)
T ss_dssp EEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCT---TCEEETTTTEEE----ECSCCGGGCEEEEEEEE
T ss_pred CCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCC---ceeecCCCCEEE----EccCChhhCEEEEEEEE
Confidence 67777766688899999999999999999999999999987763 344444556665 55669999999999999
Q ss_pred eCCCceeEEEEEEEEcc
Q psy18191 211 NELGFARSKNATLDVAG 227 (238)
Q Consensus 211 N~~G~~~s~~~~L~V~~ 227 (238)
|..|... ..+.|.|++
T Consensus 186 n~~g~~~-~~~~l~V~a 201 (201)
T 3s97_C 186 NIRGKDK-HQARIYVQA 201 (201)
T ss_dssp ETTEEEE-EEEEEEEEC
T ss_pred ecCCcee-eeEEEEEeC
Confidence 9999996 599998863
No 24
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.77 E-value=1.8e-17 Score=126.04 Aligned_cols=145 Identities=14% Similarity=0.138 Sum_probs=102.9
Q ss_pred cEEEec-cccccccce---------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEE
Q psy18191 65 ICLRFQ-DLLPQSKQG---------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRI 134 (238)
Q Consensus 65 ~~~w~~-~~~~~~~~g---------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i 134 (238)
.+.|++ ++..+...+ ...|.+.++..+|+|.|+|.+.+.. |... ...+.+.+..+|.+
T Consensus 32 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~--g~~~----------~~~~~l~v~~~p~~ 99 (189)
T 2v44_A 32 SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAK--GQTQ----------EATVVLEIYQKLTF 99 (189)
T ss_dssp EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTT--SCEE----------EEEEEEEEECCCEE
T ss_pred eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCC--CCcE----------EEEEEEEEecCCce
Confidence 799999 665443322 2468888999999999998776632 2110 11222235567888
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+............++.|. |..+..+|+|.|+|.|.|..|
T Consensus 100 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~n~~~ 175 (189)
T 2v44_A 100 REVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ----ILNINKSDEGIYRCEGRVEAR 175 (189)
T ss_dssp ESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEE----ETTCCGGGCEEEEEEEEETTT
T ss_pred eecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEE----EEEcCcccCeEEEEEEEcccc
Confidence 7777788899999999999999999999999999988865334444455666665 566699999999999999996
Q ss_pred cee-EEEEEEEE
Q psy18191 215 FAR-SKNATLDV 225 (238)
Q Consensus 215 ~~~-s~~~~L~V 225 (238)
... +..+.|.|
T Consensus 176 ~~~~~~~~~v~V 187 (189)
T 2v44_A 176 GEIDFRDIIVIV 187 (189)
T ss_dssp TEEEEEEEEEEE
T ss_pred CceeeeeEEEEE
Confidence 653 23444444
No 25
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.77 E-value=4.6e-18 Score=143.79 Aligned_cols=157 Identities=19% Similarity=0.222 Sum_probs=102.3
Q ss_pred CCccEEEeccccccccceE-------EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEE
Q psy18191 62 PKPICLRFQDLLPQSKQGL-------MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRI 134 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~g~-------~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i 134 (238)
+.+.+.|++++.+...... ..|.+.++..+|+|.|+|.+.+... ..... .......+.........+|.+
T Consensus 131 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~--~~~~~-~~~~~~~v~~~~~~~~~~p~~ 207 (384)
T 3kld_A 131 GELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVT--NHKVL-GPPTPLILRNDGVMGEYEPKI 207 (384)
T ss_dssp SCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTT--TEEEE-CCCEEEEEEEEEECCCEEEEE
T ss_pred CCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecccc--cceee-CCceEEEEccCCcccccCCce
Confidence 4578999998875432221 2367788889999999987766432 11111 001001111000112234554
Q ss_pred Ee-CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC-CEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 135 TE-HPASAVVPRHEPTTLNCKADGYPEPRIEWYKD-GSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 135 ~~-~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~-g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
.. .+....+.+|+++.|.|.+.|.|.|.+.|+++ +..+.. ..+....++.|. |..+..+|+|.|+|.|.|.
T Consensus 208 ~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~---~~~~~~~~~~L~----I~~v~~~D~G~Y~C~a~N~ 280 (384)
T 3kld_A 208 EVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSNGILE----IPNFQQEDAGSYECVAENS 280 (384)
T ss_dssp EEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCT---TCEECTTSCEEE----ECSCCGGGCEEEEEEEEET
T ss_pred eecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccc---cceecCCCcEEE----ECCCChhhCEEEEEEEEcC
Confidence 43 46678889999999999999999999999995 444432 223333455555 5666999999999999999
Q ss_pred CCceeEEEEEEEEccCC
Q psy18191 213 LGFARSKNATLDVAGKI 229 (238)
Q Consensus 213 ~G~~~s~~~~L~V~~~~ 229 (238)
.|... ..+.|.|..+|
T Consensus 281 ~G~~~-~~~~l~v~~~P 296 (384)
T 3kld_A 281 RGKNV-AKGQLTFYAQP 296 (384)
T ss_dssp TEEEE-EEEEEEEEEEE
T ss_pred CCeEE-EEEEEEEecCC
Confidence 99986 48888886654
No 26
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.77 E-value=2.4e-17 Score=124.59 Aligned_cols=142 Identities=24% Similarity=0.308 Sum_probs=103.7
Q ss_pred CCCccEEEeccccccccce-----------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 61 YPKPICLRFQDLLPQSKQG-----------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g-----------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
.+.+.+.|++++..+.... ...|.+.++...|+|.|+|...+.. |. .....+.+.+.
T Consensus 29 ~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~--~~----------~~~~~~~l~V~ 96 (182)
T 1rhf_A 29 MEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGG--ET----------EISQPVWLTVE 96 (182)
T ss_dssp CSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCT--TC----------EECCCEEEEEE
T ss_pred CCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCC--Cc----------EEEEEEEEEEe
Confidence 4567899999987554332 2467788888999999998776631 10 01111222355
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+... .. ....|. |..+ +|+|.|+|.
T Consensus 97 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~---~~---~~~~L~----i~~~--~d~G~Y~C~ 164 (182)
T 1rhf_A 97 GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP---AP---SPSVLN----VTGV--TQSTMFSCE 164 (182)
T ss_dssp CSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCS---EE---SSEEEE----ECCC--SSCEEEEEE
T ss_pred cCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCC---CC---CceEEE----Eecc--ccCeEEEEE
Confidence 78999888888899999999999999999999 99999999888642 11 233333 3433 689999999
Q ss_pred EEeCCCceeEEEEEEEEc
Q psy18191 209 ARNELGFARSKNATLDVA 226 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~ 226 (238)
|.|..|...+..+.|.|+
T Consensus 165 a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 165 AHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp EEETTEEEECCCEEEEEC
T ss_pred EECCCCCcccceEEEEeC
Confidence 999999986568888774
No 27
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.76 E-value=2.6e-18 Score=151.48 Aligned_cols=146 Identities=13% Similarity=0.047 Sum_probs=104.4
Q ss_pred CCCccEEEeccccccccce---------------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee
Q psy18191 61 YPKPICLRFQDLLPQSKQG---------------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH 125 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g---------------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~ 125 (238)
.|.+.+.|++++..+.... ...|.+.++..+|+|.|+|.+.+. . ...+.
T Consensus 255 ~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~-~---------------~~~~~ 318 (527)
T 3qs9_E 255 NHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH-P---------------SQSAL 318 (527)
T ss_dssp SSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE-E---------------EEEEE
T ss_pred CCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC-C---------------CceEE
Confidence 5578899999987543321 124788899999999999887773 0 11122
Q ss_pred cCCccCCEEEeCC--CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCe
Q psy18191 126 GDGYRVPRITEHP--ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 126 ~~v~~~P~i~~~~--~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G 203 (238)
+.+..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.++|+|+|..+.... .....++.|. |..+..+|+|
T Consensus 319 L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~---~~~~~~~~L~----I~~v~~~D~G 391 (527)
T 3qs9_E 319 VTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQ---KGLDNGYSIS----KFCNHKHQPG 391 (527)
T ss_dssp EEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBC---CBCSSSSEEE----EECCCTTCCS
T ss_pred EEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCc---ccccCCcEEE----EecCCcccCE
Confidence 2245677776544 34567889999999999999999999999999987531 1222345555 4556999999
Q ss_pred EEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 204 VYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
.|+|.|.|..|... ..+.|.|..+|.
T Consensus 392 ~YtC~A~N~~g~~~-~~~~L~V~~~P~ 417 (527)
T 3qs9_E 392 EYIFHAENDDAQFT-KMFTLNIRRKPQ 417 (527)
T ss_dssp CEEEEEEETTEEEE-EEEEEC--CCCE
T ss_pred EEEEEEEeCCCcEE-EEEEEEEecCCe
Confidence 99999999999997 489999986653
No 28
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.76 E-value=6.7e-18 Score=142.12 Aligned_cols=145 Identities=21% Similarity=0.199 Sum_probs=107.6
Q ss_pred CCccEEEecccccccc---ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCC
Q psy18191 62 PKPICLRFQDLLPQSK---QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHP 138 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~---~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~ 138 (238)
+.+.+.|++++..+.. .....|.+.++..+|+|.|+|.+.+.. |. ......+.+..+|.+...+
T Consensus 235 p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~--g~-----------~~~~~~l~V~~~p~~~~~~ 301 (382)
T 1cs6_A 235 PVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIK--GR-----------DTYQGRIIIHAQPDWLDVI 301 (382)
T ss_dssp SCCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETT--EE-----------EEEEEEEEEEEEEEEEECC
T ss_pred CCCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCC--Ce-----------EEEEEEEEEecCCCcccCC
Confidence 4668889887664322 122356677788888888887766532 21 1112223355788888888
Q ss_pred CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeE
Q psy18191 139 ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARS 218 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s 218 (238)
....+.+|+.+.|.|.+.|.|.|.+.|+++|..+... .++...++.|. |..+..+|+|.|+|.|.|..|...
T Consensus 302 ~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~---~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~N~~G~~~- 373 (382)
T 1cs6_A 302 TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQ---NRIEVSGGELR----FSKLVLEDSGMYQCVAENKHGTVY- 373 (382)
T ss_dssp CCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCC---SSEEEETTEEE----ESSCCGGGCEEEEEEEEETTEEEE-
T ss_pred CccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCC---ceEEEECCEEE----ECcCCcccCEEEEEEEEeCCCeEE-
Confidence 8889999999999999999999999999999988743 33344566665 566699999999999999999997
Q ss_pred EEEEEEEcc
Q psy18191 219 KNATLDVAG 227 (238)
Q Consensus 219 ~~~~L~V~~ 227 (238)
..+.|.|.+
T Consensus 374 ~~~~l~V~a 382 (382)
T 1cs6_A 374 ASAELTVQA 382 (382)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEeC
Confidence 599999863
No 29
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.76 E-value=4.2e-18 Score=137.97 Aligned_cols=151 Identities=21% Similarity=0.287 Sum_probs=101.8
Q ss_pred CCccEEEeccccccccc-e--E-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCE
Q psy18191 62 PKPICLRFQDLLPQSKQ-G--L-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPR 133 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~-g--~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~ 133 (238)
+.+.+.|++++..+... . . ..|.+.++...|+|.|+|.+.+... |.. ....+...+..+|.
T Consensus 128 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~-~~~----------~~~~~~l~v~~~p~ 196 (291)
T 1qz1_A 128 LPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILAR-GEI----------NFKDIQVIVNVPPT 196 (291)
T ss_dssp SCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGG-TEE----------EEEEEEEEEEEEEE
T ss_pred CCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCC-Cce----------eeEEEEEEEecCCc
Confidence 46789999988644321 1 1 2456677888888888876654211 110 01111222446777
Q ss_pred EEeCCC--ceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCC--ccEEEecC-CcEEEEEeecCCCCCCCeEEEEE
Q psy18191 134 ITEHPA--SAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIG--SHRILLPA-GSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 134 i~~~~~--~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~--~~~~~~~~-~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
+...+. ...+.+|+.+.|.|.+.|.|.|.+.|+++|..+..... .......+ ..|. |..+..+|+|.|+|.
T Consensus 197 ~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~ 272 (291)
T 1qz1_A 197 VQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELT----IRNVDKNDEAEYVCI 272 (291)
T ss_dssp EEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEE----ECSCCGGGCEEEEEE
T ss_pred ccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEE----EEecChhcCEEEEEE
Confidence 766533 45678899999999999999999999999998875311 12222222 2344 667799999999999
Q ss_pred EEeCCCceeEEEEEEEEccC
Q psy18191 209 ARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~ 228 (238)
|.|..|... ..+.|.|..+
T Consensus 273 a~N~~G~~~-~~~~l~V~~k 291 (291)
T 1qz1_A 273 AENKAGEQD-ASIHLKVFAK 291 (291)
T ss_dssp EEETTEEEE-EEEEEEEECC
T ss_pred EEeCCCceE-EEEEEEEEcC
Confidence 999999986 5999998753
No 30
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.76 E-value=1.3e-17 Score=129.37 Aligned_cols=143 Identities=13% Similarity=0.113 Sum_probs=98.7
Q ss_pred cEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEe
Q psy18191 65 ICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVP 144 (238)
Q Consensus 65 ~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~ 144 (238)
.+.|++++..+.... ..|.+.++..+|+|.|+|.+.+... ... +.+.+..+|.+...+. ..+.
T Consensus 39 ~v~W~k~g~~l~~~~-~~L~i~~v~~~D~G~Y~C~a~n~~~----------s~~-----~~l~V~~~p~~~~~~~-~~v~ 101 (204)
T 3sgj_C 39 STQWFHNESLISSQA-SSYFIDAATVDDSGEYRCQTQLSTL----------SDP-----VQLEVHIGWLLLQAPR-WVFK 101 (204)
T ss_dssp CEEEEETTEEESCCS-SEEEESSCCGGGCEEEEEEETTSBC----------CCC-----EEEEEECSSEEEECSC-SEEE
T ss_pred EEEEEECCEEcccCc-cEEEEecccccCCEEEEEEeCCCcc----------ccc-----EEEEEecCceEecCCc-eeEe
Confidence 499999988655433 4577888999999999987765211 011 1122445666666554 7788
Q ss_pred CCCcEEEEEEEeee-CCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEE
Q psy18191 145 RHEPTTLNCKADGY-PEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATL 223 (238)
Q Consensus 145 ~G~~~~L~C~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L 223 (238)
+|+.+.|.|.+.+. |.+.+.|+++|..+... ..++.|. |..+..+|+|.|+|.|.|..+...+..+.|
T Consensus 102 ~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~-------~~~~~L~----i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l 170 (204)
T 3sgj_C 102 EEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF-------HHNSDFY----IPKATLKDSGSYFCRGLVGSKNVSSETVQI 170 (204)
T ss_dssp TTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE-------EECCCEE----ESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred CCCcEEEEEEecCCCCCceEEEEECCcEeecc-------cCCceEE----ECcCCcccCEEEEEEEEeCCCceecCcEEE
Confidence 99999999999665 56889999999887531 2345665 566699999999999999665555678999
Q ss_pred EEccCCCCCCCC
Q psy18191 224 DVAGKISTATDC 235 (238)
Q Consensus 224 ~V~~~~~~~~~~ 235 (238)
.|.++++.|...
T Consensus 171 ~V~~~~~~P~i~ 182 (204)
T 3sgj_C 171 TITQGLAVSTIS 182 (204)
T ss_dssp EEEC--------
T ss_pred EEeCcCCCCccc
Confidence 999888766543
No 31
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.75 E-value=3.6e-17 Score=127.66 Aligned_cols=149 Identities=16% Similarity=0.185 Sum_probs=108.9
Q ss_pred CCCccEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceec----------CCcc
Q psy18191 61 YPKPICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHG----------DGYR 130 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~----------~v~~ 130 (238)
.+.+.+.|++++..+.......|.+.++...|+|.|+|.+.+... . .... ...+..... ....
T Consensus 45 ~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~--~---~~s~--~~~l~V~~~~~~~~~~~~~~~~~ 117 (218)
T 3k0w_A 45 HPFVQYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFT--F---EFSQ--WSQLDVCDIPESFQRSVDGVSES 117 (218)
T ss_dssp TTSSEEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTC--C---EECC--CEEEEEECCCGGGCTTCCSBCCS
T ss_pred CCCCEEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCC--C---ceee--EEEEEEEccCcccccccccccCC
Confidence 346789999998866555445678889999999999988776422 1 0000 011110000 0123
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ..+.|. |..+..+|+|.|+|.|.
T Consensus 118 ~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~--------~~~~L~----i~~v~~~d~G~Y~C~a~ 185 (218)
T 3k0w_A 118 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE--------TKKLYM----VPYVDLEHQGTYWCHVY 185 (218)
T ss_dssp SCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC--------CSSEEE----ESSCCGGGCEEEEEEEE
T ss_pred CceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC--------CCCEEE----EeecChhcCEEEEEEEE
Confidence 478888888899999999999999999999999999999887643 123343 66779999999999999
Q ss_pred eCCCceeEEEEEEEEccC
Q psy18191 211 NELGFARSKNATLDVAGK 228 (238)
Q Consensus 211 N~~G~~~s~~~~L~V~~~ 228 (238)
|..|...+..+.|.|...
T Consensus 186 n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 186 NDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp CSSCEEECCCEEEEECC-
T ss_pred cCCCCceeeeEEEEEeCC
Confidence 999996667889998764
No 32
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.75 E-value=3.6e-17 Score=137.85 Aligned_cols=157 Identities=18% Similarity=0.205 Sum_probs=112.5
Q ss_pred CCCccEEEecc--cccccc-----c---------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce
Q psy18191 61 YPKPICLRFQD--LLPQSK-----Q---------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV 124 (238)
Q Consensus 61 ~~~~~~~w~~~--~~~~~~-----~---------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~ 124 (238)
.|.+.+.|+++ +..+.. . +...|.+.++..+|+|.|+|.+.+.. |. ....+
T Consensus 27 ~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~--g~-----------~~~~~ 93 (389)
T 2jll_A 27 EPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRI--GG-----------HQKSM 93 (389)
T ss_dssp SSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSS--CE-----------EEEEE
T ss_pred ccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCC--CC-----------cceEE
Confidence 45678999998 654432 1 12467788888999999998877642 21 11122
Q ss_pred ecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeE
Q psy18191 125 HGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 125 ~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~ 204 (238)
.+.+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+............++....+ .|..+...|+|.
T Consensus 94 ~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L-~i~~~~~~d~G~ 172 (389)
T 2jll_A 94 YLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMIL-EIAPTSDNDFGR 172 (389)
T ss_dssp EEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEE-EECCCSTTSSEE
T ss_pred EEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEE-EECCCChhhCEE
Confidence 3335578888776666678999999999999999999999999999887642223333322221111 267779999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 205 YWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
|+|.|.|..|... ..+.|.+...+..|
T Consensus 173 Y~C~a~N~~G~~~-~~~~l~v~~~P~~P 199 (389)
T 2jll_A 173 YNCTATNHIGTRF-QEYILALADVPSSP 199 (389)
T ss_dssp EEEEEEETTEEEE-EEEEEEECCCCCCC
T ss_pred EEEEEEcCCCcEE-EEEEEEecCCCCCC
Confidence 9999999999986 48889887777665
No 33
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.75 E-value=7.2e-18 Score=142.34 Aligned_cols=144 Identities=22% Similarity=0.343 Sum_probs=107.6
Q ss_pred CCCccEEEeccccccccc---eE--------EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 61 YPKPICLRFQDLLPQSKQ---GL--------MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~---g~--------~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
.|.+.+.|++++..+... .+ ..|.+.++..+|+|.|+|.+.+.. |.... ..+.+.+.
T Consensus 239 ~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~--g~~~~----------~~~~l~V~ 306 (395)
T 1bih_A 239 NPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGV--GKPQK----------HSLKLTVV 306 (395)
T ss_dssp SSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSS--SSCEE----------EEEEEEEE
T ss_pred CCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCC--CCceE----------EEEEEEEE
Confidence 456789999998755331 11 157777888888888887776642 21111 12233355
Q ss_pred cCCEEEeCCCc-eEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPAS-AVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~-~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.+...+.. ..+.+|+.+.|.|.+.|.|.|.+.|+++|..+... ++...++.|. |..+..+|+|.|+|.
T Consensus 307 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~----~~~~~~~~L~----i~~~~~~d~G~Y~C~ 378 (395)
T 1bih_A 307 SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG----RATVTDSGLV----IKGVKNGDKGYYGCR 378 (395)
T ss_dssp EEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS----SEEEETTEEE----ESSCCSTTCEEEEEE
T ss_pred cCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC----ceEEECCEEE----EeeCCcccCEEEEEE
Confidence 78999888777 78899999999999999999999999999988642 3334455554 667799999999999
Q ss_pred EEeCCCceeEEEEEEEE
Q psy18191 209 ARNELGFARSKNATLDV 225 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V 225 (238)
|.|..|... ..+.|.|
T Consensus 379 a~N~~G~~~-~~~~l~V 394 (395)
T 1bih_A 379 ATNEHGDKY-FETLVQV 394 (395)
T ss_dssp EEETTEEEE-EEEEEEE
T ss_pred EEccCCCce-EEEEEEE
Confidence 999999997 4888887
No 34
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.75 E-value=4.7e-18 Score=137.68 Aligned_cols=152 Identities=22% Similarity=0.269 Sum_probs=96.1
Q ss_pred CCccEEEecccccccc--c-eE-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCE
Q psy18191 62 PKPICLRFQDLLPQSK--Q-GL-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPR 133 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~--~-g~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~ 133 (238)
+.+.+.|++++..+.. . .. ..|.+.++...|+|.|+|.+.+... |. .....+...+..+|.
T Consensus 126 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~-~~----------~~~~~~~~~v~~~p~ 194 (291)
T 2wim_A 126 PAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEAR-GE----------IDFRDIIVIVNVPPA 194 (291)
T ss_dssp SCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTT-TE----------EEEEEEEEEEEBCCC
T ss_pred CCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCC-Ce----------eEEeeEEEEeccCCc
Confidence 4677899998764432 1 11 1356667777788888876544211 10 011111222445676
Q ss_pred EEeCCC--ceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 134 ITEHPA--SAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 134 i~~~~~--~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
+...+. ...+.+|+.+.|.|.+.|.|.|.+.|+++|..+... ........++.|. |..+..+|+|.|+|.|.|
T Consensus 195 ~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a~N 269 (291)
T 2wim_A 195 ISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-EKYILKGSNTELT----VRNIINSDGGPYVCRATN 269 (291)
T ss_dssp CBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCT-TTEEECSTTCEEE----EESCCSTTCEEEEEEEEE
T ss_pred cccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCC-ccEEEcCCccEEE----EeeCCcccCEEEEEEEEE
Confidence 655433 345678999999999999999999999999988753 1222222234455 556699999999999999
Q ss_pred CCCceeEEEEEEEEccCCC
Q psy18191 212 ELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 212 ~~G~~~s~~~~L~V~~~~~ 230 (238)
..|... ..+.|.|..++.
T Consensus 270 ~~G~~~-~~~~l~v~~~~~ 287 (291)
T 2wim_A 270 KAGEDE-KQAFLQVFVQHH 287 (291)
T ss_dssp TTEEEE-EEEEEEC-----
T ss_pred CCCcee-eeEEEEEEEecc
Confidence 999997 599999877653
No 35
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.75 E-value=1.4e-17 Score=127.00 Aligned_cols=151 Identities=11% Similarity=0.075 Sum_probs=102.0
Q ss_pred CCCccEEEeccccccccce---------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccC
Q psy18191 61 YPKPICLRFQDLLPQSKQG---------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRV 131 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g---------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~ 131 (238)
.+.+.+.|++++..+.... ...|.+..+..+|+|.|+|.+.+.. |.... ...+.+..+
T Consensus 34 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~--~~~~~-----------~~~l~v~~~ 100 (197)
T 3lcy_A 34 RPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEV--GEVET-----------SSKLLLQAT 100 (197)
T ss_dssp ESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSS--CEEEE-----------EEEEEEEEE
T ss_pred CCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCC--CceeE-----------EEEEEEEcC
Confidence 4566899999887543321 2367778888889999998766532 21111 111113344
Q ss_pred CEEEeC---CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCC-CCCeEEEE
Q psy18191 132 PRITEH---PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKD-TDSGVYWC 207 (238)
Q Consensus 132 P~i~~~---~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~-~d~G~Y~C 207 (238)
|.+... +....+..|+.+.|.|.+.|.|.|.+.|++++..+... ........+... ...|..+.. +|+|.|+|
T Consensus 101 p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~--~~~~~~~~~~~~-~L~i~~~~~~~d~G~Y~C 177 (197)
T 3lcy_A 101 PQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNS--ENITIENTEHYT-HLVMKNVQRKTHAGKYKV 177 (197)
T ss_dssp EEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEEEEECSSEE-EEEESSCCHHHHCEEEEE
T ss_pred CCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCC--CceEEEEcCCEE-EEEEccccchhhCceEEE
Confidence 554322 24567789999999999999999999999999988743 222222222211 223667774 79999999
Q ss_pred EEEeCCCceeEEEEEEEEccC
Q psy18191 208 VARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~ 228 (238)
.|.|..|... ..+.|.|.++
T Consensus 178 ~a~n~~g~~~-~~~~l~V~~k 197 (197)
T 3lcy_A 178 QLSNVFGTVD-AILDVEIQDK 197 (197)
T ss_dssp EEECSSCEEE-EEEEEEEECC
T ss_pred EEEcCcCceE-EEEEEEEecC
Confidence 9999999996 5999998753
No 36
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.75 E-value=1.8e-17 Score=125.67 Aligned_cols=149 Identities=23% Similarity=0.291 Sum_probs=98.5
Q ss_pred CCCccEEEecccccccc---ceE-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 61 YPKPICLRFQDLLPQSK---QGL-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~---~g~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.+.|++++..+.. ... ..|.+.++...|+|.|+|...+... +. . ....+...+..+|
T Consensus 29 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-~~-~---------~~~~~~l~v~~~p 97 (189)
T 2v5t_A 29 SPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEAR-GE-I---------DFRDIIVIVNVPP 97 (189)
T ss_dssp SSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTT-TE-E---------EEEEEEEEEEEEE
T ss_pred CCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCC-Cc-e---------EEEEEEEEecCCC
Confidence 35678999998874432 111 1367778888889999876554321 10 0 0011112244567
Q ss_pred EEEeCCC--ceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 133 RITEHPA--SAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 133 ~i~~~~~--~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
.+...+. ...+.+|+.+.|.|.+.|.|.|.+.|+++|..+... ........++.|. |..+..+|+|.|+|.|.
T Consensus 98 ~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~-~~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a~ 172 (189)
T 2v5t_A 98 AISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-EKYILKGSNTELT----VRNIINSDGGPYVCRAT 172 (189)
T ss_dssp EEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCS-SSEEEETTTTEEE----ECSCCGGGCEEEEEEEE
T ss_pred CcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCC-CcEEEecCCCEEE----EcCCChhhCeeEEEEEE
Confidence 7766544 346678999999999999999999999999988753 2222222344455 56669999999999999
Q ss_pred eCCCceeEEEEEEEEc
Q psy18191 211 NELGFARSKNATLDVA 226 (238)
Q Consensus 211 N~~G~~~s~~~~L~V~ 226 (238)
|..|... ..+.|.|.
T Consensus 173 n~~g~~~-~~~~l~V~ 187 (189)
T 2v5t_A 173 NKAGEDE-KQAFLQVF 187 (189)
T ss_dssp ETTEEEE-EEEEEEEE
T ss_pred eCCCcee-EEEEEEEE
Confidence 9999996 48888874
No 37
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.75 E-value=4e-18 Score=131.68 Aligned_cols=154 Identities=23% Similarity=0.366 Sum_probs=102.4
Q ss_pred CCCccEEEeccccccccc-------------eEE---EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce
Q psy18191 61 YPKPICLRFQDLLPQSKQ-------------GLM---YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV 124 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~-------------g~~---~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~ 124 (238)
.+.+.+.|++++..+... +.. .+.+.++...|+|.|+|.+.+... .... ....+.
T Consensus 36 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g------~~~~-~~~~l~-- 106 (212)
T 2v9r_A 36 RPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLG------EAVS-HDASLE-- 106 (212)
T ss_dssp ESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTE------EEEC-CCEEEE--
T ss_pred CCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCC------ceee-cceEEE--
Confidence 456789999988644321 111 223346678889999987665322 1000 011111
Q ss_pred ecCCc-cCCEEEeCCCceEEeCCCcEEEEEEE-eeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCC
Q psy18191 125 HGDGY-RVPRITEHPASAVVPRHEPTTLNCKA-DGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 125 ~~~v~-~~P~i~~~~~~~~~~~G~~~~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~ 202 (238)
+. .+|.+...+....+..|+.+.|.|.+ .|.|.|.+.|++++..+... ..+....++.|. |..+..+|+
T Consensus 107 ---V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~--~~~~~~~~~~L~----i~~~~~~d~ 177 (212)
T 2v9r_A 107 ---VAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDK--DERITIRGGKLM----ITYTRKSDA 177 (212)
T ss_dssp ---ECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTT--STTEEEETTEEE----ESSCCGGGC
T ss_pred ---EEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCC--cceEEccCCeEE----EeeCCHhhC
Confidence 11 23444455667889999999999998 99999999999999998753 223334566665 566699999
Q ss_pred eEEEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 203 GVYWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 203 G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
|.|+|.|.|..|...+..+.|.|..+|...
T Consensus 178 G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~ 207 (212)
T 2v9r_A 178 GKYVCVGTNMVGERESEVAELTVLERPSFV 207 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred eeEEEEEecccCceecceEEEEEEeCchHh
Confidence 999999999999986545899998877654
No 38
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.75 E-value=3.6e-17 Score=114.88 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=81.5
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+... ....+....+.. .+.|..+..+|+|.|+|.|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~~~~~~--~L~I~~v~~~D~G~Y~C~a 82 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQES-EHMKVENSENGS--KLTILAARQEHCGCYTLLV 82 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCS-SSEEEEECSSEE--EEEETTCCTTTCEEEEEEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCC-CCEEEEEcCCEE--EEEECCCChhcCEEEEEEE
Confidence 5788888888999999999999999999999999999999888643 222222222222 2237888999999999999
Q ss_pred EeCCCceeEEEEEEEEccCCCCCCCC
Q psy18191 210 RNELGFARSKNATLDVAGKISTATDC 235 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~~~~~~~~~ 235 (238)
.|..|... ..+.|.|..++.+|...
T Consensus 83 ~N~~g~~~-~~~~l~V~~~p~~P~~p 107 (114)
T 2cqv_A 83 ENKLGSRQ-AQVNLTVVDKPDPPAGT 107 (114)
T ss_dssp ECSSCEEE-CCEEEEEECSCSCCCCC
T ss_pred EECCCcEE-EEEEEEEECCCCCCCCC
Confidence 99999987 49999999888776543
No 39
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.74 E-value=3.4e-17 Score=112.03 Aligned_cols=97 Identities=27% Similarity=0.464 Sum_probs=78.1
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..+|.|...|....+.+|+++.|.|.+.|.|.|.+.|+++|..+............++...+ .|..+..+|+|.|+|.
T Consensus 3 ~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L--~i~~v~~~D~G~Y~C~ 80 (100)
T 2kdg_A 3 MGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSL--IFEVVRASDAGAYACV 80 (100)
T ss_dssp CEEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEE--EESSCCGGGCEEEEEE
T ss_pred CCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEE--EECCCCcccCEEEEEE
Confidence 46788888888899999999999999999999999999999988764222333333442222 2677899999999999
Q ss_pred EEeCCCceeEEEEEEEEccC
Q psy18191 209 ARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~ 228 (238)
|.|..|... ..+.|.|..+
T Consensus 81 a~n~~g~~~-~~~~l~V~~~ 99 (100)
T 2kdg_A 81 AKNRAGEAT-FTVQLDVLAK 99 (100)
T ss_dssp EEETTEEEE-EEEEEEEECC
T ss_pred EEcCCCeEE-EEEEEEEEec
Confidence 999999986 5999999765
No 40
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.74 E-value=6e-17 Score=110.59 Aligned_cols=95 Identities=24% Similarity=0.305 Sum_probs=76.4
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEE-ecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRIL-LPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+... ...... ..++...+ .|..+..+|+|.|+|.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~-~~~~~~~~~~~~~~L--~i~~v~~~D~G~Y~C~ 80 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERS-DRIYWYWPEDNVCEL--VIRDVTGEDSASIMVK 80 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC-SSEEEEEEETTEEEE--EECSCCGGGCEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCC-CCEEEEEcCCCEEEE--EECCCCcCCCEEEEEE
Confidence 5788988888999999999999999999999999999999988753 222222 22332222 2677899999999999
Q ss_pred EEeCCCceeEEEEEEEEccC
Q psy18191 209 ARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~ 228 (238)
|.|..|...+ .+.|.|.++
T Consensus 81 a~N~~g~~~~-~~~l~V~~~ 99 (99)
T 1g1c_A 81 AINIAGETSS-HAFLLVQAK 99 (99)
T ss_dssp EEETTEEEEE-EEEEEEECC
T ss_pred EEECCCcEEE-EEEEEEecC
Confidence 9999999974 999998753
No 41
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.74 E-value=4.5e-17 Score=132.12 Aligned_cols=158 Identities=15% Similarity=0.094 Sum_probs=101.1
Q ss_pred CC-ccEEE-eccccccccceE------EEEEcCCCCCCCCC-ceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 62 PK-PICLR-FQDLLPQSKQGL------MYLVGSQASPDYPN-RFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 62 ~~-~~~~w-~~~~~~~~~~g~------~~l~~~~~~~~~~g-~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
|. +.+.| ++++..+..... ..|.+.++..+|+| .|+|.+.+... ... .....+. +......+|
T Consensus 118 p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~------~~~-s~~~~l~-V~~~~~~~P 189 (290)
T 2o26_X 118 PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGT------WLH-SDKFTLK-VREAIKAIP 189 (290)
T ss_dssp CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTE------EEE-CCCEEEE-EECCCCSCC
T ss_pred CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCc------eEE-eEEEEEE-EEeCCCCCC
Confidence 45 78999 467765543221 14566778888888 88877665311 100 0111111 111134789
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCE-EEEEeCCEEe----eccCCccEEEec-CCcEEEEEeecCCCCCCCeEEE
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPR-IEWYKDGSLV----SAEIGSHRILLP-AGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~-i~W~~~g~~l----~~~~~~~~~~~~-~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
.+...+....+.+|+.+.|.|.+.|.|.|. +.|++++..+ ... ........ .......+.|..+..+|+|.|+
T Consensus 190 ~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~ 268 (290)
T 2o26_X 190 VVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVK-HNSWHRGDFNYERQETLTISSARVDDSGVFM 268 (290)
T ss_dssp EEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEE-CCEEEEETTEEEEEEEEEESSCCSSSCEEEE
T ss_pred ccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeec-ccccccCceeeEEEEEEEEcCCCcccCeEEE
Confidence 998887788899999999999999999996 9999998773 221 11111100 0011112237788999999999
Q ss_pred EEEEeCCCceeEEEEEEEEccCC
Q psy18191 207 CVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.|.|..|... ..+.|.|..+|
T Consensus 269 C~a~N~~g~~~-~~~~l~V~~~P 290 (290)
T 2o26_X 269 CYANNTFGSAN-VTTTLKVVEKG 290 (290)
T ss_dssp EEEECSSCEEE-EEEEECC----
T ss_pred EEEeCCCCcEE-EEEEEEEEeCC
Confidence 99999999996 59999987654
No 42
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=1.1e-16 Score=121.30 Aligned_cols=145 Identities=16% Similarity=0.124 Sum_probs=97.5
Q ss_pred CccEEEeccccccccce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCC
Q psy18191 63 KPICLRFQDLLPQSKQG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHP 138 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~ 138 (238)
...+.|++++..+.... ...+.+. ..+|+|.|+|.+.+.. . ..+.+.+..+|.+...+
T Consensus 29 ~~~~~W~k~~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~~-------------~---~~~~l~V~~~P~~~~~~ 90 (184)
T 3b5h_A 29 VTGHRWLKGGVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPEP-------------M---GTANIQLHGPPRVKAVK 90 (184)
T ss_dssp CCEEEEESSSEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEESTT-------------S---CEEEEEECCSCCCEESC
T ss_pred ceEEEEEeCCEEeecccccCCcEEEEEe--chhhCeEEEEEEECCc-------------C---cEEEEEEecCCceeecC
Confidence 34899999987554321 2233333 4677888887665411 1 11122255788888888
Q ss_pred CceEEeCCCcEEEEEEEeeeC-CCEEEEEe---CCEEeec-cCCccEEEecCCcEEEEEeecCCC-CCCCeEEEEEEEeC
Q psy18191 139 ASAVVPRHEPTTLNCKADGYP-EPRIEWYK---DGSLVSA-EIGSHRILLPAGSLFFLSLVHGKK-DTDSGVYWCVARNE 212 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P-~p~i~W~~---~g~~l~~-~~~~~~~~~~~~~l~~~~vi~~v~-~~d~G~Y~C~a~N~ 212 (238)
....+.+|+.+.|.|.+.|.| .|.+.|++ ++..+.. ....+......+.... +.|..+. .+|+|.|+|.|.|.
T Consensus 91 ~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L~i~~v~~~~d~G~Y~C~a~N~ 169 (184)
T 3b5h_A 91 SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSE-LHIENLNMEADPGQYRCNGTSS 169 (184)
T ss_dssp SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEE-EEECSCCTTTSSEEEEEEEEET
T ss_pred CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeE-EEEeeccccccCceEEEEEEeC
Confidence 778899999999999999999 79999999 4544332 2112233222332211 2267779 89999999999999
Q ss_pred CCceeEEEEEEEEcc
Q psy18191 213 LGFARSKNATLDVAG 227 (238)
Q Consensus 213 ~G~~~s~~~~L~V~~ 227 (238)
.|... ..+.|.|.+
T Consensus 170 ~g~~~-~~~~l~V~~ 183 (184)
T 3b5h_A 170 KGSDQ-AIITLRVRS 183 (184)
T ss_dssp TEEEE-EEEEEEEC-
T ss_pred CCcce-EEEEEEEec
Confidence 99997 489999865
No 43
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.74 E-value=4.6e-17 Score=133.30 Aligned_cols=163 Identities=15% Similarity=0.213 Sum_probs=109.5
Q ss_pred CCCccEEEeccccccccce---------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcce---------ec
Q psy18191 61 YPKPICLRFQDLLPQSKQG---------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPL---------FP 122 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g---------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~---------~~ 122 (238)
.+.+.+.|++++..+.... ...|.+.++...|+|.|+|.+.+. .|............. ..
T Consensus 135 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~~~~~~~~~~~~~ 212 (317)
T 2y25_A 135 VEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDG--KTGHQKTVDLSGQAYDEAYAEFQRLK 212 (317)
T ss_dssp CSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECS--SCEEEEEEEECHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeC--CceEEEEEEEeeeeccccchhhcccC
Confidence 4678899999987654321 235888899999999999887763 332222211110000 00
Q ss_pred ceecCCccCCEEEeC-CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCC
Q psy18191 123 GVHGDGYRVPRITEH-PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 123 ~~~~~v~~~P~i~~~-~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d 201 (238)
........+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+... ....+...++....+ .|..+..+|
T Consensus 213 ~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~-~~~~~~~~~~~~~~L-~i~~v~~~d 290 (317)
T 2y25_A 213 QAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASD-DHCNLKFEAGRTAYF-TINGVSTAD 290 (317)
T ss_dssp HHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCC-SSEEECCBTTTEEEE-EEBSCCSTT
T ss_pred CcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCC-CcEEEEEcCCCEEEE-EECCCCHHH
Confidence 000112235566554 56678999999999999999999999999999988753 222222232422222 367789999
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 202 SGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
+|.|+|.|.|..|... ..+.|.|..+
T Consensus 291 ~G~Y~C~a~N~~g~~~-~~~~l~V~~P 316 (317)
T 2y25_A 291 SGKYGLVVKNKYGSET-SDFTVSVFIP 316 (317)
T ss_dssp CEEEEEEEEETTEEEE-EEEEEEEECC
T ss_pred CEEEEEEEEeCCCeEE-EEEEEEEEcC
Confidence 9999999999999996 5999998754
No 44
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.73 E-value=2.3e-16 Score=127.32 Aligned_cols=153 Identities=20% Similarity=0.234 Sum_probs=109.7
Q ss_pred CCccEEEeccccccccce---------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 62 PKPICLRFQDLLPQSKQG---------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~g---------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
+.+.+.|++++..+...+ ...|.+.++...|+|.|+|.+.+.. |.. ...+.+.+..+|
T Consensus 33 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~--g~~-----------~~~~~l~V~~~p 99 (284)
T 2rik_A 33 APIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVA--GKD-----------SCSAQLGVQEPP 99 (284)
T ss_dssp SCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT--EEE-----------EEEEEEEEECCC
T ss_pred CCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECC--ceE-----------EEEEEEEccCCC
Confidence 456899999987554322 2467788889999999998776532 211 111222355678
Q ss_pred EEEeCC-CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 133 RITEHP-ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 133 ~i~~~~-~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .........+...+ .|..+..+|+|.|+|.|.|
T Consensus 100 ~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~L--~i~~~~~~d~G~Y~C~a~n 176 (284)
T 2rik_A 100 RFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES-SKFRMSFVESVAVL--EMYNLSVEDSGDYTCEAHN 176 (284)
T ss_dssp EEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCS-SSEEEEEETTEEEE--EECSCCGGGCEEEEEEEEC
T ss_pred cccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCC-CcEEEEEcCCEEEE--EECCCCcccCEEEEEEEEc
Confidence 877654 3466899999999999999999999999999988753 22222222332222 2677799999999999999
Q ss_pred CCCceeEEEEEEEEccCCCC
Q psy18191 212 ELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 212 ~~G~~~s~~~~L~V~~~~~~ 231 (238)
..|... ..+.|.|..++..
T Consensus 177 ~~g~~~-~~~~l~V~~~p~~ 195 (284)
T 2rik_A 177 AAGSAS-SSTSLKVKEPPVF 195 (284)
T ss_dssp SSCEEE-EEEEEEEECCCBC
T ss_pred CCCcee-EEEEEEEecCCcc
Confidence 999986 5999999876643
No 45
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.73 E-value=1e-16 Score=130.69 Aligned_cols=156 Identities=19% Similarity=0.268 Sum_probs=109.0
Q ss_pred CCCccEEEeccccccccc-----------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 61 YPKPICLRFQDLLPQSKQ-----------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~-----------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
.+.+.+.|++++..+... +...|.+.++..+|+|.|+|.+.+.. |... ..+.+.+.
T Consensus 31 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~--g~~~-----------~~~~l~V~ 97 (305)
T 2nzi_A 31 HPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQG--GSVS-----------GTASLEVE 97 (305)
T ss_dssp SSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETT--EEEE-----------EEEEEEEC
T ss_pred CCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCC--CCcc-----------ceEEEEEe
Confidence 456789999998754332 22368888999999999998776532 2111 11112233
Q ss_pred cCCEEEe-----CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecC-CCCCCCe
Q psy18191 130 RVPRITE-----HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHG-KKDTDSG 203 (238)
Q Consensus 130 ~~P~i~~-----~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~-v~~~d~G 203 (238)
.+|.+.. .+....+..|+.+.|.|.+.|.|.|.+.|++++..+... ....+....+...+ .|.. +...|+|
T Consensus 98 ~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~~l--~i~~~~~~~d~G 174 (305)
T 2nzi_A 98 VPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN-GHYQVIVTRSFTSL--VFPNGVERKDAG 174 (305)
T ss_dssp EEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSS-SSCEEEECSSEEEE--EETTCCCSTTCE
T ss_pred cCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCC-CcEEEEEcCCceEE--EEecCCccCccE
Confidence 4554432 235678899999999999999999999999999887643 22222222222222 2566 8999999
Q ss_pred EEEEEEEeCCCceeEEEEEEEEccCCCCCC
Q psy18191 204 VYWCVARNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
.|+|.|.|..|... ..+.|.|...|.+|.
T Consensus 175 ~Y~C~a~N~~G~~~-~~~~l~v~~~P~~p~ 203 (305)
T 2nzi_A 175 FYVVCAKNRFGIDQ-KTVELDVADVPDPPR 203 (305)
T ss_dssp EEEEEEEETTEEEE-EEEEEEEEBCCCCCE
T ss_pred EEEEEEEeCCCcee-eEEEEEEecCCCCCC
Confidence 99999999999996 599999998887664
No 46
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.73 E-value=1e-16 Score=110.34 Aligned_cols=97 Identities=29% Similarity=0.372 Sum_probs=78.2
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
+..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... ....+....+...+ .|..+..+|+|.|+|
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~~~~~~~L--~i~~~~~~D~G~Y~C 81 (103)
T 3qp3_A 5 LDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQES-SKIHYTNTSGVLTL--EILDCHTDDSGTYRA 81 (103)
T ss_dssp TCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCC-SSEEEEEETTEEEE--EECSCCGGGCEEEEE
T ss_pred CCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC-CCEEEEECCCEEEE--EEcCCCcccCEEEEE
Confidence 456899999889999999999999999999999999999999988753 22222222232222 367889999999999
Q ss_pred EEEeCCCceeEEEEEEEEccC
Q psy18191 208 VARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~ 228 (238)
.|.|..|... ..+.|.|.+.
T Consensus 82 ~a~N~~G~~~-~~~~l~V~~~ 101 (103)
T 3qp3_A 82 VCTNYKGEAS-DYATLDVTGG 101 (103)
T ss_dssp EEEETTEEEE-EEEEEEEECC
T ss_pred EEEeCCCcEE-EEEEEEEECC
Confidence 9999999996 5999999764
No 47
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.73 E-value=2.1e-17 Score=130.31 Aligned_cols=164 Identities=18% Similarity=0.214 Sum_probs=102.8
Q ss_pred CCCccEEEeccccccccce----------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc
Q psy18191 61 YPKPICLRFQDLLPQSKQG----------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR 130 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g----------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~ 130 (238)
.+.+.+.|++++..+.... ...|.+.++...|+|.|+|.+.+... ..... ..+. +......
T Consensus 42 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~~~~------~~l~-V~~~~~~ 112 (241)
T 3grw_A 42 NPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFG--SIRQT------YTLD-VLERSPH 112 (241)
T ss_dssp SSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTE--EEEEE------EEEE-EECCCCC
T ss_pred CCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCC--ceEEE------EEEE-EeccCCC
Confidence 3567899999987554321 12577888999999999987665322 11111 1111 1111223
Q ss_pred CCEEEe-CCCceEEeCCCcEEEEEEEeeeCCCEEEEEe----CCEEeeccCCccEEE-----ecCCcEEEEEeecCCCCC
Q psy18191 131 VPRITE-HPASAVVPRHEPTTLNCKADGYPEPRIEWYK----DGSLVSAEIGSHRIL-----LPAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 131 ~P~i~~-~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~----~g~~l~~~~~~~~~~-----~~~~~l~~~~vi~~v~~~ 200 (238)
+|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.......... .........+.|..+..+
T Consensus 113 ~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 192 (241)
T 3grw_A 113 RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSER 192 (241)
T ss_dssp CCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGG
T ss_pred CceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcc
Confidence 344443 4667888999999999999999999999999 787766432222111 111111222336777999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEccCCCCCCC
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVAGKISTATD 234 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~~~ 234 (238)
|+|.|+|.|.|..|... ..+.|.|..++.++..
T Consensus 193 d~G~Y~C~a~N~~g~~~-~~~~l~V~~~p~~~~~ 225 (241)
T 3grw_A 193 DGGEYLCRATNFIGVAE-KAFWLSVHGPRAAEEE 225 (241)
T ss_dssp GCEEEEEEEECSSCEEE-EEEEEEC---------
T ss_pred cCcEEEEEEecCcceEE-EEEEEEecCCCCCCcc
Confidence 99999999999999996 5999999988877654
No 48
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.73 E-value=7.5e-17 Score=110.11 Aligned_cols=96 Identities=22% Similarity=0.352 Sum_probs=76.7
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+... ........++... .+.|..+..+|+|.|+|.
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~-~~~~~~~~~~~~~-~L~i~~~~~~D~G~Y~C~ 80 (99)
T 1u2h_A 3 KAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPD-QRRFAEEAEGGLC-RLRILAAERGDAGFYTCK 80 (99)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCB-TTEEEEECGGGEE-EEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCC-CCEEEEECCCCEE-EEEEccCCcCCCEEEEEE
Confidence 36788988888999999999999999999999999999999988754 2222222233221 223778899999999999
Q ss_pred EEeCCCceeEEEEEEEEcc
Q psy18191 209 ARNELGFARSKNATLDVAG 227 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~ 227 (238)
|.|..|... ..+.|.|.+
T Consensus 81 a~N~~g~~~-~~~~l~V~~ 98 (99)
T 1u2h_A 81 AVNEYGARQ-CEARLEVRG 98 (99)
T ss_dssp EEETTEEEE-EEEEEEEEC
T ss_pred EEECCCcee-EEEEEEEEC
Confidence 999999996 589999875
No 49
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.72 E-value=2.7e-17 Score=128.57 Aligned_cols=159 Identities=19% Similarity=0.229 Sum_probs=105.6
Q ss_pred CCCccEEEeccccccccce----------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc
Q psy18191 61 YPKPICLRFQDLLPQSKQG----------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR 130 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g----------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~ 130 (238)
.+.+.+.|++++..+.... ...|.+.++...|+|.|+|.+.+... ..... ..+. +......
T Consensus 46 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~--~~~~~------~~l~-V~~~~~~ 116 (231)
T 3ojm_B 46 NPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG--SINHT------YHLD-VVERSRH 116 (231)
T ss_dssp ESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTE--EEEEE------EEEE-EECCCCC
T ss_pred CCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccC--ccccc------EEEE-EEcCCCC
Confidence 3567899999987554321 12577889999999999987765322 11111 1111 1111223
Q ss_pred CCEEEeC-CCceEEeCCCcEEEEEEEeeeCCCEEEEEe----CCEEeeccCCccEEEe--------cCCcEEEEEeecCC
Q psy18191 131 VPRITEH-PASAVVPRHEPTTLNCKADGYPEPRIEWYK----DGSLVSAEIGSHRILL--------PAGSLFFLSLVHGK 197 (238)
Q Consensus 131 ~P~i~~~-~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~----~g~~l~~~~~~~~~~~--------~~~~l~~~~vi~~v 197 (238)
+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ +|..+........... ..+.|. |..+
T Consensus 117 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~~ 192 (231)
T 3ojm_B 117 RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLA----LFNV 192 (231)
T ss_dssp CCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEE----ECSC
T ss_pred CCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEE----EecC
Confidence 4444433 567888999999999999999999999999 7777654322221111 122344 5666
Q ss_pred CCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCCCC
Q psy18191 198 KDTDSGVYWCVARNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
..+|+|.|+|.|.|..|... ..+.|.|..++.+|.
T Consensus 193 ~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 193 TEADAGEYICKVSNYIGQAN-QSAWLTVLPKQQAPG 227 (231)
T ss_dssp CGGGCEEEEEEEEETTEEEE-EEEEEEEECCC----
T ss_pred CHHHCeEEEEEEEeccceEe-eEEEEEEecCCCCCc
Confidence 99999999999999999996 599999998887764
No 50
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.72 E-value=2.6e-16 Score=128.54 Aligned_cols=155 Identities=20% Similarity=0.276 Sum_probs=100.5
Q ss_pred CCCccEEEeccccccccce----E-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccC
Q psy18191 61 YPKPICLRFQDLLPQSKQG----L-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRV 131 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g----~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~ 131 (238)
.+.+.+.|++++.++.... + ..|.+.++...|+|.|+|.+.+... ..... ...+. ......+
T Consensus 135 ~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g------~~~~~-~~~l~--v~~~~~~ 205 (304)
T 2yd9_A 135 NPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAG------VRYSS-PANLY--VRVQNVA 205 (304)
T ss_dssp SSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTE------EEECC-CEEEE--EECCCEE
T ss_pred CCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCC------CEEec-cEEEE--EEeeccC
Confidence 3467899999887554321 1 1466778888888888877665322 11000 00111 1112367
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.... . ...+.+.+. |. ..+|+|.|+|.|.|
T Consensus 206 P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~--~---~~~~~~~L~--i~--~~~d~G~Y~C~a~N 276 (304)
T 2yd9_A 206 PRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPED--D---MPVGRNVLE--LT--DVKDSANYTCVAMS 276 (304)
T ss_dssp EEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSS--S---CCBSEEEEE--EC--SCCSCEEEEEEEEE
T ss_pred CcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcc--c---ccCCcEEEE--Ec--ccccCEEEEEEEEe
Confidence 888888888888999999999999999999999999999886531 1 123444333 22 55799999999999
Q ss_pred CCCceeEEEEEEEEccCCCCCCC
Q psy18191 212 ELGFARSKNATLDVAGKISTATD 234 (238)
Q Consensus 212 ~~G~~~s~~~~L~V~~~~~~~~~ 234 (238)
..|... ..+.|.|.+++.....
T Consensus 277 ~~G~~~-~~~~l~V~~~~~~~~~ 298 (304)
T 2yd9_A 277 SLGVIE-AVAQITVKSLPKAGTK 298 (304)
T ss_dssp TTEEEE-EEEEEC----------
T ss_pred CCCcEE-EEEEEEEecCcccccc
Confidence 999997 5999999887765543
No 51
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.72 E-value=1e-16 Score=135.08 Aligned_cols=138 Identities=20% Similarity=0.288 Sum_probs=101.8
Q ss_pred CCCccEEEeccccccc------cc-eE----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 61 YPKPICLRFQDLLPQS------KQ-GL----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~------~~-g~----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
.|.+.+.|++++.... .. .+ ..|.+.++..+|+|.|+|.+.+.. |. ....+.+.+.
T Consensus 239 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~--g~-----------~~~~~~l~V~ 305 (388)
T 2v5m_A 239 FPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSV--GG-----------ESVETVLTVT 305 (388)
T ss_dssp ESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSS--CE-----------EEEEEEEEEE
T ss_pred CCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCC--Cc-----------eeEEEEEEEe
Confidence 3577899999743211 01 11 256777888888888888777643 21 1111222355
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.+...+....+.+|+++.|.|.+.|.|.|.+.|+++|..+... ++.|. |..+..+|+|.|+|.|
T Consensus 306 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~---------~~~L~----i~~v~~~d~G~Y~C~a 372 (388)
T 2v5m_A 306 APLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS---------ESVLR----IESVKKEDKGMYQCFV 372 (388)
T ss_dssp EEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC---------SSEEE----ESSCCGGGCEEEEEEE
T ss_pred CCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC---------CCEEE----EecCChhhCEEEEEEE
Confidence 6788777778889999999999999999999999999999987642 34444 6667999999999999
Q ss_pred EeCCCceeEEEEEEEE
Q psy18191 210 RNELGFARSKNATLDV 225 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V 225 (238)
.|..|... ..+.|.|
T Consensus 373 ~N~~G~~~-~~~~l~V 387 (388)
T 2v5m_A 373 RNDRESAE-ASAELKL 387 (388)
T ss_dssp ECSSCEEE-EEEEEEE
T ss_pred EcCCCcEE-EEEEEEe
Confidence 99999997 4888876
No 52
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=6.9e-17 Score=110.61 Aligned_cols=96 Identities=29% Similarity=0.466 Sum_probs=79.6
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
...+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ........++.|. |..+..+|+|.|+|
T Consensus 5 ~~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~L~----i~~v~~~d~G~Y~C 79 (100)
T 2edj_A 5 SSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGR-DPRATIQEQGTLQ----IKNLRISDTGTYTC 79 (100)
T ss_dssp CCSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSS-CSSCEECTTCCEE----EESCCTTTCCEEEE
T ss_pred CCCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCC-CCCEEEcCCCEEE----EccCCcccCEEEEE
Confidence 346899998899999999999999999999999999999999888743 2333344567776 45559999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCC
Q psy18191 208 VARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|.|..|... ..+.|.|.+++
T Consensus 80 ~a~n~~g~~~-~~~~l~V~~~~ 100 (100)
T 2edj_A 80 VATSSSGETS-WSAVLDVTESG 100 (100)
T ss_dssp EEECSSCCCB-CCEEEEEESCC
T ss_pred EEEcCCCCEE-EEEEEEEecCC
Confidence 9999999996 59999998753
No 53
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.72 E-value=4.1e-16 Score=136.80 Aligned_cols=154 Identities=15% Similarity=0.076 Sum_probs=108.9
Q ss_pred CCcc-EEEeccccc--ccc------------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceec
Q psy18191 62 PKPI-CLRFQDLLP--QSK------------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHG 126 (238)
Q Consensus 62 ~~~~-~~w~~~~~~--~~~------------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~ 126 (238)
+.+. +.|++++.. +.. .+...|.+.++..+|+|.|+|.+.+.. |.. ...+.+
T Consensus 239 p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~--g~~-----------~~~~~l 305 (524)
T 2ec8_A 239 SSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTF--GSA-----------NVTTTL 305 (524)
T ss_dssp STTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSS--CEE-----------EEEEEE
T ss_pred CCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecC--Cce-----------EEEEEE
Confidence 3555 999998876 221 123567788889999999998776632 211 112223
Q ss_pred CCccCCEEEeCC---CceEEeCCCcEEEEEEEeeeCCCE-EEEEeCCEEeeccCCccEEEecCC---cEEEEEeecCCCC
Q psy18191 127 DGYRVPRITEHP---ASAVVPRHEPTTLNCKADGYPEPR-IEWYKDGSLVSAEIGSHRILLPAG---SLFFLSLVHGKKD 199 (238)
Q Consensus 127 ~v~~~P~i~~~~---~~~~~~~G~~~~L~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~---~l~~~~vi~~v~~ 199 (238)
.+..+|.+...+ ....+.+|+.+.|.|.+.|.|.|. +.|+++|..+.... .......++ .....+.|..+..
T Consensus 306 ~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~ 384 (524)
T 2ec8_A 306 EVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKW-EDYPKSENESNIRYVSELHLTRLKG 384 (524)
T ss_dssp EEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSB-CCEESCCSSSCCEEEEEEEECSCCG
T ss_pred EEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCc-cceeEEccCCCceeEEEEEEeecCc
Confidence 355778876654 368899999999999999999999 99999998887532 122222222 1222334778899
Q ss_pred CCCeEEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 200 TDSGVYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 200 ~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
+|+|.|+|.|.|..|... ..+.|.|..+|.
T Consensus 385 ~d~G~Y~C~a~N~~g~~~-~~~~l~V~~~P~ 414 (524)
T 2ec8_A 385 TEGGTYTFLVSNSDVNAA-IAFNVYVNTKPE 414 (524)
T ss_dssp GGCEEEEEEEECSSCEEE-EEEEEEECEEEE
T ss_pred ccCeEEEEEEEecCceEE-EEEEEEEecCCe
Confidence 999999999999999986 599999976553
No 54
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.72 E-value=4.5e-16 Score=138.14 Aligned_cols=133 Identities=13% Similarity=0.159 Sum_probs=90.4
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc-CCEEEeCCCceEEeCCCcEEEEEEEe----
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR-VPRITEHPASAVVPRHEPTTLNCKAD---- 156 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~-~P~i~~~~~~~~~~~G~~~~L~C~~~---- 156 (238)
.|.+.++..+|+|.|+|.+ +. .|..... +.+.+.. +|.+. .+....+.+|+.+.|.|.+.
T Consensus 407 ~L~I~~v~~~D~G~Y~C~a-n~--~g~~~~~-----------~~l~V~~~~p~~~-~~~~~~v~~G~~v~L~C~~~~~~~ 471 (585)
T 2ocw_A 407 TVILNQLTSRDAGFYWCLT-NG--DTLWRTT-----------VEIKIIEGEPNLK-VPGNVTAVLGETLKVPCHFPCKFS 471 (585)
T ss_pred EEEECCCChhhCEEEEEcc-cC--CCcccee-----------EEEEEecCccccc-cCCceeEecCCcEEEEEEecCCCC
Confidence 4778888889999999766 32 2221111 1111222 44444 36778899999999999986
Q ss_pred eeCCCEEEEEeCCEEeeccCCcc----EEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 157 GYPEPRIEWYKDGSLVSAEIGSH----RILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 157 g~P~p~i~W~~~g~~l~~~~~~~----~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.|.|.+.|+++|..+....... ............+.|..+..+|+|.|+|.|.|..|...+..+.|.|..++
T Consensus 472 ~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 472 SYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred CCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 77889999999998876432111 12222221112223677899999999999999999876546899998876
No 55
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.71 E-value=1.3e-16 Score=112.52 Aligned_cols=101 Identities=24% Similarity=0.424 Sum_probs=80.6
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecC-C--cEEEEEeecCCCCCCCeE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPA-G--SLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~-~--~l~~~~vi~~v~~~d~G~ 204 (238)
...+|.|+..|.++.+.+|+++.|.|.+.|.|.|.+.|++++..+........+...+ + .|.+..+ ..+|+|.
T Consensus 12 ~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v----~~~D~G~ 87 (116)
T 2kkq_A 12 HKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDV----NKKDAGW 87 (116)
T ss_dssp CCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEE----CGGGCEE
T ss_pred CCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCC----CcccCEE
Confidence 3467888888999999999999999999999999999999999887532222222222 2 4555444 9999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEccCCCCCC
Q psy18191 205 YWCVARNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
|+|.|.|..|... ..+.|.|..++.++.
T Consensus 88 Y~C~a~N~~G~~~-~~~~l~V~~~p~~~~ 115 (116)
T 2kkq_A 88 YTVSAVNEAGVTT-CNTRLDVTARPNQTL 115 (116)
T ss_dssp EEEEEEETTEEEE-EEEEEEEECCSCCCC
T ss_pred EEEEEEcCCCeEE-EEEEEEEeCCCCCCC
Confidence 9999999999996 599999998876653
No 56
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.71 E-value=9.9e-17 Score=131.03 Aligned_cols=154 Identities=26% Similarity=0.307 Sum_probs=101.1
Q ss_pred CCCccEEEeccccccccce----------EEEEEcCCCCC-CCCCceEEEeCCCcccCCceEEeCCCCcceecceec--C
Q psy18191 61 YPKPICLRFQDLLPQSKQG----------LMYLVGSQASP-DYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHG--D 127 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g----------~~~l~~~~~~~-~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~--~ 127 (238)
.|.+.+.|++++..+.... ...|.+.++.. .|+|.|+|.+.+.. |. .. ....+..... .
T Consensus 33 ~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~--g~----~~--~~~~l~V~~~~~~ 104 (304)
T 2yd9_A 33 DPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSV--GE----IT--VHAKLTVLREDQL 104 (304)
T ss_dssp SSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSS--CE----EC--CEEEEEEECGGGC
T ss_pred eCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCC--Ce----EE--EEEEEEEeccccC
Confidence 4567899999987543321 14577788886 89999998877643 21 11 1111111000 0
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCc-cEEEecCCcEEEEEeecCCCCCCCeEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGS-HRILLPAGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~-~~~~~~~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
....|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+...... ......++.|. |..+..+|+|.|+
T Consensus 105 p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~----i~~~~~~d~G~Y~ 180 (304)
T 2yd9_A 105 PSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQ----IESSEETDQGKYE 180 (304)
T ss_dssp CTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEE----ECSCCGGGCEEEE
T ss_pred CCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEE----EccCCcccCEEEE
Confidence 112378888888889999999999999999999999999999988754222 23344566666 5566999999999
Q ss_pred EEEEeCCCceeEEEEEEEEc
Q psy18191 207 CVARNELGFARSKNATLDVA 226 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~ 226 (238)
|.|.|..|...+..+.|.|.
T Consensus 181 C~a~n~~g~~~~~~~~l~v~ 200 (304)
T 2yd9_A 181 CVATNSAGVRYSSPANLYVR 200 (304)
T ss_dssp EEEEETTEEEECCCEEEEEE
T ss_pred EEEEeCCCCEEeccEEEEEE
Confidence 99999999875433555553
No 57
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.71 E-value=8.7e-17 Score=123.96 Aligned_cols=131 Identities=16% Similarity=0.153 Sum_probs=84.8
Q ss_pred EEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCE
Q psy18191 83 LVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPR 162 (238)
Q Consensus 83 l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~ 162 (238)
|.+.++...|+|.|+|...+... +.... ............|.+...+.. +.+|+.+.|.|.+.+.| |.
T Consensus 73 L~i~~v~~~D~G~Y~C~~~~~~~-~~~~~--------~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~ 140 (208)
T 3r4d_A 73 LLFQMITMKDMGVYTLDMTDENY-RRTQA--------TVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-AN 140 (208)
T ss_dssp EEECSCCGGGCEEEEEEEECSSC-EEEEE--------EEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CE
T ss_pred EEEccccccCCeEEEEEEEcccC-ceeEE--------EEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-Cc
Confidence 55666667777777765554311 11000 001011112234677665444 88999999999999966 89
Q ss_pred EEEEeCCEEeeccCCccEEEe-cCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCC
Q psy18191 163 IEWYKDGSLVSAEIGSHRILL-PAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 163 i~W~~~g~~l~~~~~~~~~~~-~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
+.|++++..+... ...... .++.|. |..+..+|+|.|+|.|.|.+|...+..++|.|..++-.
T Consensus 141 i~W~~~g~~l~~~--~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 141 IQWLFNSQSLQLT--ERMTLSQNNSILR----IDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204 (208)
T ss_dssp EEEEETTEECCCC--SSEEEETTTTEEE----ESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-----
T ss_pred eEEEECCEeCCCC--CCeEEcCCCCEEE----EeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCcc
Confidence 9999999988743 222222 235554 56669999999999999999999888999998776643
No 58
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.71 E-value=7.9e-17 Score=108.93 Aligned_cols=90 Identities=20% Similarity=0.233 Sum_probs=72.0
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--EEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--SLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++ ..+... .......+... +.|..+..+|+|.|+|.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~---~~~~~~~~~~~--L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE---LLVDAKSSTTS--IFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT---SEEEEETTEEE--EECTTBCGGGCEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc---EEEEecCCEEE--EEECCCChhcCEEEEEE
Confidence 688877778889999999999999999999999999999 777532 22222233222 23788899999999999
Q ss_pred EEeCCCceeEEEEEEEEc
Q psy18191 209 ARNELGFARSKNATLDVA 226 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~ 226 (238)
|.|..|... ..+.|.|+
T Consensus 77 a~N~~G~~~-~~~~l~V~ 93 (93)
T 1wit_A 77 VKNELGEDE-AIFEVIVQ 93 (93)
T ss_dssp EEETTEEEE-EEEEEEEC
T ss_pred EEcCCCeEE-EEEEEEEC
Confidence 999999986 58888874
No 59
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.71 E-value=4.8e-17 Score=126.35 Aligned_cols=151 Identities=21% Similarity=0.312 Sum_probs=99.9
Q ss_pred CCCccEEEeccccccccc-----------eEEE--EEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecC
Q psy18191 61 YPKPICLRFQDLLPQSKQ-----------GLMY--LVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGD 127 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~-----------g~~~--l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~ 127 (238)
.+.+.+.|++++..+... +..+ +.+.++...|+|.|+|.+.+... .... ....+..
T Consensus 36 ~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g------~~~~-~~~~l~v---- 104 (217)
T 2vr9_A 36 KPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVG------QAVS-RHASLQI---- 104 (217)
T ss_dssp SSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTE------EEEC-CCEEEEE----
T ss_pred CCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCC------cccc-ccceEEE----
Confidence 356789999988754331 1111 24567788899999987665322 1100 0111110
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEE-eeeCCCEEEEEeCCEEeeccC------CccEEEecCCcEEEEEeecCCCCC
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKA-DGYPEPRIEWYKDGSLVSAEI------GSHRILLPAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~-~g~P~p~i~W~~~g~~l~~~~------~~~~~~~~~~~l~~~~vi~~v~~~ 200 (238)
...+|.+...+....+.+|+.+.|.|.+ .|.|.|.+.|++++..+.... ........++.|. |..+..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~~~~~ 180 (217)
T 2vr9_A 105 AVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLL----ISNVEPI 180 (217)
T ss_dssp CEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEE----ESSCCST
T ss_pred EEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEE----EeeCCHH
Confidence 1124555556677889999999999998 899999999999999887321 2222333455555 5667999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
|+|.|+|.|.|..|...+ ...+.+..
T Consensus 181 d~G~Y~C~a~N~~G~~~~-~~~~lv~~ 206 (217)
T 2vr9_A 181 DEGNYKCIAQNLVGTRES-SYAKLIVQ 206 (217)
T ss_dssp TCEEEEEEEEETTEEEEC-CCEEEEEC
T ss_pred HCeEEEEEEEcccceecc-ccEEEEEE
Confidence 999999999999999975 54444433
No 60
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.71 E-value=2.9e-16 Score=127.08 Aligned_cols=151 Identities=19% Similarity=0.144 Sum_probs=108.3
Q ss_pred CccEEEec-cccccccc-----------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc
Q psy18191 63 KPICLRFQ-DLLPQSKQ-----------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR 130 (238)
Q Consensus 63 ~~~~~w~~-~~~~~~~~-----------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~ 130 (238)
.+.+.|++ ++..+... +...|.+.++..+|+|.|+|.+.+.. |.. ....+.+.+..
T Consensus 32 ~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~--g~~----------~~~~~~l~v~~ 99 (291)
T 1qz1_A 32 DKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAED--GTQ----------SEATVNVKIFQ 99 (291)
T ss_dssp CCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTT--SCE----------EEEEEEEEEEC
T ss_pred CcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCC--CCe----------eEEEEEEEeec
Confidence 67899999 66644321 12467888899999999998776642 110 11112222456
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+............++.|. |..+..+|+|.|+|.|.
T Consensus 100 ~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a~ 175 (291)
T 1qz1_A 100 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ----IRGIKKTDEGTYRCEGR 175 (291)
T ss_dssp CSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEE----ETTCCGGGCEEEEEEEE
T ss_pred cccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEE----EccCccccCeEEEEEEE
Confidence 78888888888999999999999999999999999999988765433444445566665 66679999999999999
Q ss_pred eCC-CceeEEEEEEEEccCC
Q psy18191 211 NEL-GFARSKNATLDVAGKI 229 (238)
Q Consensus 211 N~~-G~~~s~~~~L~V~~~~ 229 (238)
|.. |...+..+.|.|..+|
T Consensus 176 n~~~~~~~~~~~~l~v~~~p 195 (291)
T 1qz1_A 176 ILARGEINFKDIQVIVNVPP 195 (291)
T ss_dssp EGGGTEEEEEEEEEEEEEEE
T ss_pred ecCCCceeeEEEEEEEecCC
Confidence 987 4433346667665443
No 61
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.71 E-value=1.4e-16 Score=130.50 Aligned_cols=161 Identities=13% Similarity=0.100 Sum_probs=107.3
Q ss_pred CCCccEEEeccccccccce------EEEEEcCCCCCCCCCceEEEeC-CCcccCCceEEeCCCCcceecceecCCccCCE
Q psy18191 61 YPKPICLRFQDLLPQSKQG------LMYLVGSQASPDYPNRFSLCNN-KTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPR 133 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g------~~~l~~~~~~~~~~g~y~~~~~-~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~ 133 (238)
.|.+.+.|++++.++.... ...|.+.++..+|+|.|+|.+. +. .|...... ....+..+......+|.
T Consensus 136 ~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~--~g~~~~~~---~~~~~~~~~~~~~~~P~ 210 (315)
T 1itb_B 136 NELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTY--LGKQYPIT---RVIEFITLEENKPTRPV 210 (315)
T ss_dssp TCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEE--TTEEEEEE---EEEEEEEECCCCCCCCE
T ss_pred CCCCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCC--CCcEEEEE---EEEEEEEecCCCCCCCE
Confidence 4567899999988653321 1257778899999999998776 32 22211100 00111111111246788
Q ss_pred EEeCCCc-eEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCC---ccEEEecCC------cEEEEEeecCCCCCC-C
Q psy18191 134 ITEHPAS-AVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIG---SHRILLPAG------SLFFLSLVHGKKDTD-S 202 (238)
Q Consensus 134 i~~~~~~-~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~---~~~~~~~~~------~l~~~~vi~~v~~~d-~ 202 (238)
+...+.. ..+.+|+.+.|.|.+.|.|.|.+.|+++|..+..... ..+.....+ .....+.|..+..+| +
T Consensus 211 ~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~ 290 (315)
T 1itb_B 211 IVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYK 290 (315)
T ss_dssp ECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGT
T ss_pred EecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcC
Confidence 8766553 5789999999999999999999999999998876421 112222221 111223377889999 9
Q ss_pred eEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 203 GVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 203 G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
|.|+|.|.|..|... ..+.|.|..
T Consensus 291 G~Y~C~a~N~~G~~~-~~~~l~v~~ 314 (315)
T 1itb_B 291 HPFTCFAKNTHGIDA-AYIQLIYPV 314 (315)
T ss_dssp SCEEEEEECTTCCEE-EEEEEECCC
T ss_pred CceEEEEecCCCcee-EEEEEEecC
Confidence 999999999999997 599998753
No 62
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=2.7e-17 Score=114.60 Aligned_cols=103 Identities=24% Similarity=0.434 Sum_probs=82.9
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+............++...+ .|..+..+|+|.|+|.
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L--~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSL--IIEPVTSRDAGIYTCI 84 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEE--EESSCCGGGCSBBCEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEE--EEeeCCcccCEEEEEE
Confidence 46899999899999999999999999999999999999999887753222222223332222 2677899999999999
Q ss_pred EEeCCCceeEEEEEEEEccCCCCCCC
Q psy18191 209 ARNELGFARSKNATLDVAGKISTATD 234 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~~~~~~ 234 (238)
|.|..|... ..+.|.|..++++|..
T Consensus 85 a~n~~g~~~-~~~~l~V~~~p~~P~~ 109 (110)
T 2dm3_A 85 ATNRAGQNS-FSLELVVAAKESGPSS 109 (110)
T ss_dssp EECSSCEEE-ECCEEEEECCCCSSSC
T ss_pred EECCCCEEE-EEEEEEEeCCCCCCCC
Confidence 999999986 6999999999888764
No 63
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.71 E-value=5.8e-16 Score=117.62 Aligned_cols=149 Identities=19% Similarity=0.191 Sum_probs=99.3
Q ss_pred CCCccEEEeccccccccce-------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCE
Q psy18191 61 YPKPICLRFQDLLPQSKQG-------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPR 133 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g-------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~ 133 (238)
.+.+.+.|++++..+...+ ...|.+.++...|+|.|+|...+... . ....+.+.+..+|.
T Consensus 31 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--~-----------~~~~~~l~V~~~p~ 97 (192)
T 2va4_A 31 SPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAG--E-----------DEKQAFLQVFVQPH 97 (192)
T ss_dssp SSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTE--E-----------EEEEEEEEEEEEEE
T ss_pred CCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcccc--c-----------cceEEEEEEEccCc
Confidence 3566899999987654432 12466778888888888876654321 1 11112222456677
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEEeeccC---CccEEEe-cCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSLVSAEI---GSHRILL-PAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~l~~~~---~~~~~~~-~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
+...+ ...+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.... ....... ..+... ..|..+..+|+|.|+|
T Consensus 98 ~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--L~i~~~~~~d~G~Y~C 174 (192)
T 2va4_A 98 IIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS--LHIKDVKLSDSGRYDC 174 (192)
T ss_dssp EEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE--EEEESCCGGGCEEEEE
T ss_pred ccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE--EEEecCCcccCEEEEE
Confidence 66543 46677899999999999999999999998 65554310 1111111 122111 2266779999999999
Q ss_pred EEEeCCCceeEEEEEEEEc
Q psy18191 208 VARNELGFARSKNATLDVA 226 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~ 226 (238)
.|.|..|... ..+.|.|+
T Consensus 175 ~a~n~~g~~~-~~~~l~V~ 192 (192)
T 2va4_A 175 EAASRIGGHQ-KSMYLDIE 192 (192)
T ss_dssp EEECSSCEEE-EEEEEEEC
T ss_pred EEEecCCceE-EEEEEEeC
Confidence 9999999986 59999874
No 64
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.70 E-value=4.2e-16 Score=126.00 Aligned_cols=154 Identities=13% Similarity=0.079 Sum_probs=98.4
Q ss_pred EEEec-cccccccce-E-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCC
Q psy18191 66 CLRFQ-DLLPQSKQG-L-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHP 138 (238)
Q Consensus 66 ~~w~~-~~~~~~~~g-~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~ 138 (238)
+.|++ ++..+.... + ..|.+.++...|+|.|+|.+.+. ..| .. .....+. +......+|.+...+
T Consensus 122 v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~-~~~----~~--~~~~~l~-V~~~~~~~p~i~~~~ 193 (289)
T 3ejj_X 122 VSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVN-GRE----ST--STGIWLK-VNRVHPEPPQIKLEP 193 (289)
T ss_dssp EEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEET-TEE----EE--CCCEEEE-EESSCCCCCEEEEES
T ss_pred EEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeC-CCc----cc--cccEEEE-EEECCCCCCeEEecC
Confidence 88976 444433221 1 13567778888888888776521 111 11 1111111 111123688888888
Q ss_pred CceEEeCCCcEEEEEEEee-eCCCEEEEEeCCEEeeccCCccEEEecCCc--EEEEEeecCCCCCCCeEEEEEEEeCCCc
Q psy18191 139 ASAVVPRHEPTTLNCKADG-YPEPRIEWYKDGSLVSAEIGSHRILLPAGS--LFFLSLVHGKKDTDSGVYWCVARNELGF 215 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g-~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~--l~~~~vi~~v~~~d~G~Y~C~a~N~~G~ 215 (238)
....+.+|+.+.|.|.+.| .|.|.+.|++++..+... ......... ....+.|..+..+|+|.|+|.|.|..|.
T Consensus 194 ~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~---~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 270 (289)
T 3ejj_X 194 SKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIP---LNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGT 270 (289)
T ss_dssp SSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCC---EEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCE
T ss_pred CceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeecc---CCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCC
Confidence 8888889999999999998 799999999999887642 111111111 1122236778999999999999999999
Q ss_pred eeEEEEEEEEccCCCC
Q psy18191 216 ARSKNATLDVAGKIST 231 (238)
Q Consensus 216 ~~s~~~~L~V~~~~~~ 231 (238)
.. .++.|.+...+..
T Consensus 271 ~~-~s~~L~~~~~~~~ 285 (289)
T 3ejj_X 271 RT-ATMNFQVVESHHH 285 (289)
T ss_dssp EE-EEEEEECC-----
T ss_pred cc-ccEEEEEEecccc
Confidence 97 4999998776543
No 65
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.70 E-value=1.5e-16 Score=122.00 Aligned_cols=152 Identities=13% Similarity=0.124 Sum_probs=98.4
Q ss_pred CCccEEEecccccccc--------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCE
Q psy18191 62 PKPICLRFQDLLPQSK--------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPR 133 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~--------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~ 133 (238)
+.+.+.|+|++..... .....|.+.++..+|+|.|+|.+.+... .........+. ......+|.
T Consensus 31 ~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g------~~~~s~~~~l~--V~~~~~~p~ 102 (196)
T 3p2t_A 31 EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVG------WSQPSDPLELV--MTGAYSKPT 102 (196)
T ss_dssp TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTE------EBCCCCCEEEE--EECSSCCCE
T ss_pred CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCc------ccCCCccEEEE--ecCCCCCCE
Confidence 3468999999875432 1235678889999999999987765322 11111111111 111234677
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEE--EecCCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRI--LLPAGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~--~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
+...+.. .+.+|+.++|.|.+.+. .+.+.|+|+|..+......... ....+.|. |..++.+|+|.|+|.|.|
T Consensus 103 ~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~n 176 (196)
T 3p2t_A 103 LSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFP----MSPVTSVHGGTYRCFSSH 176 (196)
T ss_dssp EEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEE----ECSCCGGGCEEEEEEEEC
T ss_pred EEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEE----eCCCcccCCCeEEEEEEc
Confidence 7765554 67899999999999884 4689999999876542111111 11223333 677799999999999999
Q ss_pred CCC----ceeEEEEEEEEcc
Q psy18191 212 ELG----FARSKNATLDVAG 227 (238)
Q Consensus 212 ~~G----~~~s~~~~L~V~~ 227 (238)
..+ +..+..+.|.|.+
T Consensus 177 ~~~~~~~s~~S~~~~l~V~G 196 (196)
T 3p2t_A 177 GFSHYLLSHPSDPLELIVSG 196 (196)
T ss_dssp GGGTTEECCCCCCEEEEEC-
T ss_pred CCCCcccCCCCCCEEEEeCC
Confidence 987 4445577887753
No 66
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.70 E-value=9.7e-17 Score=131.05 Aligned_cols=155 Identities=15% Similarity=0.151 Sum_probs=101.0
Q ss_pred CCCccEEEeccccccccc-----------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCC-cceeccee---
Q psy18191 61 YPKPICLRFQDLLPQSKQ-----------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPS-LPLFPGVH--- 125 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~-----------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~-~~~~~~~~--- 125 (238)
.|.+.+.|++++.++... +...|.+.++...|+|.|+|.+.+... ........ ......+.
T Consensus 135 ~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 210 (312)
T 2y23_A 135 SGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKA----TNHSTVVLVGDVFKKLQKEA 210 (312)
T ss_dssp CSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSC----EEEEEEEECTHHHHHHHHHH
T ss_pred CCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCc----eEEEEEEEcchhhhhhcccc
Confidence 467889999998754332 233488889999999999986643211 11110000 00000000
Q ss_pred ------cCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCC
Q psy18191 126 ------GDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKK 198 (238)
Q Consensus 126 ------~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~ 198 (238)
.....+|.+.... ...+.+|+.+.|.|.+.|.|.| .+.|+++|..+... ..... .++... +.|..+.
T Consensus 211 ~~~~~~~~~~~~p~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~-~~~~~--~~~~~~--L~I~~v~ 284 (312)
T 2y23_A 211 EFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD-EKHDF--KDGICT--LLITEFS 284 (312)
T ss_dssp HHHHHHHHHHHSSEEEEEE-EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEE-CCC------CEEE--EEECSCS
T ss_pred cccccchhhccCCceeecc-eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCC-CcEEE--ECCEEE--EEECcCC
Confidence 0012357766443 3778999999999999999998 99999999998753 12222 233222 2367789
Q ss_pred CCCCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 199 DTDSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
.+|+|.|+|.|.|..|... ..+.|.|+
T Consensus 285 ~~d~G~Y~C~a~N~~G~~~-~~~~l~i~ 311 (312)
T 2y23_A 285 KKDAGIYEVILKDDRGKDK-SRLKLVDE 311 (312)
T ss_dssp GGGCEEEEEEEESTTCCEE-EEEEECSC
T ss_pred HHHCEEEEEEEEcCCCcee-eeeEEEec
Confidence 9999999999999999997 48888764
No 67
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.70 E-value=4.7e-16 Score=106.04 Aligned_cols=96 Identities=25% Similarity=0.461 Sum_probs=76.8
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
+..+|.|...+.+..+.+|+++.|.|.+.|.|.|.+.|++++..+... ....+...++...+ .|..+..+|+|.|+|
T Consensus 3 ~~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~~~~~~~~L--~i~~~~~~d~G~Y~C 79 (99)
T 3puc_A 3 ISSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQG-GKYKLSEDKGGFFL--EIHKTDTSDSGLYTC 79 (99)
T ss_dssp CCEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSS-SSEEEEEETTEEEE--EECSCCGGGCEEEEE
T ss_pred CCCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCC-CCEEEEEeCCEEEE--EECCCCcccCEEEEE
Confidence 346889998889999999999999999999999999999999988753 22223222332222 367779999999999
Q ss_pred EEEeCCCceeEEEEEEEEcc
Q psy18191 208 VARNELGFARSKNATLDVAG 227 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~ 227 (238)
.|.|..|... ..+.|.|.+
T Consensus 80 ~a~n~~g~~~-~~~~l~V~~ 98 (99)
T 3puc_A 80 TVKNSAGSVS-SSCKLTIKA 98 (99)
T ss_dssp EEEETTEEEE-EEEEEEEEC
T ss_pred EEEeCCCcEe-EEEEEEEEe
Confidence 9999999996 599998864
No 68
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.70 E-value=2.9e-16 Score=118.31 Aligned_cols=136 Identities=12% Similarity=0.087 Sum_probs=97.3
Q ss_pred cEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEe
Q psy18191 65 ICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVP 144 (238)
Q Consensus 65 ~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~ 144 (238)
.+.|++++..+... ...|.+.++..+|+|.|+|...+... .....+. +..+|.+... ....+.
T Consensus 39 ~~~W~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~~n~~~----------s~~~~l~-----V~~~~~~~~~-~~~~~~ 101 (175)
T 1fnl_A 39 STQWFHNESLISSQ-ASSYFIDAATVNDSGEYRCQTNLSTL----------SDPVQLE-----VHIGWLLLQA-PRWVFK 101 (175)
T ss_dssp CCEEEETTEEEESS-CSEEEESSCCGGGCEEEEEECSSSCC----------CCCEEEE-----EECSSEEEEC-SCSEEE
T ss_pred ceEEEECCEEccCC-ceEEEEeCCCcccCEEEEEEeeCCcc----------cccEEEE-----EeCCCceeeC-CCceec
Confidence 47899998755432 33577888999999999987765211 1111111 2334554444 346788
Q ss_pred CCCcEEEEEEEeeeCCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEE
Q psy18191 145 RHEPTTLNCKADGYPEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATL 223 (238)
Q Consensus 145 ~G~~~~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L 223 (238)
+|+.+.|.|.+.+.|++ .+.|+++|..+.. ...++.|. |..+..+|+|.|+|.|.|..|...+..+.|
T Consensus 102 ~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-------~~~~~~L~----i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l 170 (175)
T 1fnl_A 102 EEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-------FHHNSDFH----IPKATLKDSGSYFCRGLVGSKNVSSETVNI 170 (175)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEETTEEEEE-------EEECCCEE----ESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred CCCCEEEEEEcCCCCCceEEEEEECCeEccC-------CCCCCEEE----EcccChhhCeEEEEEEEcCCCCccCccEEE
Confidence 99999999999887664 9999999988753 12356665 566699999999999999887766678899
Q ss_pred EEccC
Q psy18191 224 DVAGK 228 (238)
Q Consensus 224 ~V~~~ 228 (238)
.|.++
T Consensus 171 ~V~~~ 175 (175)
T 1fnl_A 171 TITQA 175 (175)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 98764
No 69
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.70 E-value=8.5e-19 Score=160.15 Aligned_cols=136 Identities=19% Similarity=0.253 Sum_probs=0.0
Q ss_pred EEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCE
Q psy18191 83 LVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPR 162 (238)
Q Consensus 83 l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~ 162 (238)
|.+.++..+|+|.|+|.+.+... |...+. ...+...+..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.
T Consensus 627 L~i~~~~~~d~G~Y~C~a~n~~~-~~~~s~--------~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~ 697 (772)
T 3v2a_R 627 MELKNASLQDQGDYVCLAQDRKT-KKRHCV--------VRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQ 697 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEECCCCccCCcEEEEEEEeCCC-CeEEEE--------EEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCe
Confidence 66777788888888876665321 111100 001111135788888877788899999999999999999999
Q ss_pred EEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCCCC
Q psy18191 163 IEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 163 i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
+.|+++|..+... ........++.|. |..+..+|+|.|+|.|.|.+|...+ .+.|.|.++++...
T Consensus 698 v~W~k~g~~l~~~-~~~~~~~~~~~L~----I~~v~~~D~G~Y~C~a~N~~G~~~~-~~~l~V~~~p~~~~ 762 (772)
T 3v2a_R 698 IMWFKDNETLVED-SGIVLKDGNRNLT----IRRVRKEDEGLYTCQACSVLGCAKV-EAFFIIEGAQEKTN 762 (772)
T ss_dssp -----------------------------------------------------------------------
T ss_pred EEEEECCeECcCC-CCeEEcCCCcEEE----ECcCCHHHCEEEEEEEEeCCcceeE-EEEEEEECCCCccc
Confidence 9999999988753 1111222245555 4555999999999999999999974 99999999887654
No 70
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.70 E-value=4.1e-17 Score=125.87 Aligned_cols=151 Identities=21% Similarity=0.265 Sum_probs=99.7
Q ss_pred CCccEEEeccccccc------------c-ceE----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce
Q psy18191 62 PKPICLRFQDLLPQS------------K-QGL----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV 124 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~------------~-~g~----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~ 124 (238)
+.+.+.|++++..+. . ..+ ..|.+.++...|+|.|+|.+.+.. |... ....+
T Consensus 29 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--g~~~---------~~~~~ 97 (212)
T 1f97_A 29 SSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEG--GQNY---------GEVSI 97 (212)
T ss_dssp SSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEETT--SSSE---------EEEEE
T ss_pred CCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEEccC--CCcc---------cEEEE
Confidence 567899999876421 0 111 356777888888888887665531 1100 11112
Q ss_pred ecCCccCCEEEeCCCceEEeCCCcEEEEEE-EeeeCCCEEEEEeCCE-EeeccCCc------cEEE--ecCCcEEEEEee
Q psy18191 125 HGDGYRVPRITEHPASAVVPRHEPTTLNCK-ADGYPEPRIEWYKDGS-LVSAEIGS------HRIL--LPAGSLFFLSLV 194 (238)
Q Consensus 125 ~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~-~~g~P~p~i~W~~~g~-~l~~~~~~------~~~~--~~~~~l~~~~vi 194 (238)
.+.+..+|.+...+....+.+|+.+.|.|. +.|.|.|.+.|++++. .+...... .... ...+.|. |
T Consensus 98 ~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~----i 173 (212)
T 1f97_A 98 HLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLI----F 173 (212)
T ss_dssp EEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEE----E
T ss_pred EEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEE----E
Confidence 222445665544445567899999999999 7999999999999998 77643110 1111 2345555 5
Q ss_pred cCCCCCCCeEEEEEEEeCCCce-eEEEEEEEEcc
Q psy18191 195 HGKKDTDSGVYWCVARNELGFA-RSKNATLDVAG 227 (238)
Q Consensus 195 ~~v~~~d~G~Y~C~a~N~~G~~-~s~~~~L~V~~ 227 (238)
..+..+|+|.|+|.|.|..|.. .+..+.|.|.+
T Consensus 174 ~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 174 DPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred EecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 6669999999999999999998 44577888865
No 71
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=8.5e-17 Score=112.16 Aligned_cols=103 Identities=23% Similarity=0.309 Sum_probs=82.4
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEec-CCcEEEEEeecCCCCCCCeEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLP-AGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~-~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
..+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+........+... ++... +.|..+..+|+|.|+|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~--L~i~~v~~~D~G~Y~C 83 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCS--LHTTASTLDDDGNYTI 83 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEE--EEESSCCTTTCSCCEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEE--EEECCCChhhCEEEEE
Confidence 46788888888899999999999999999999999999999888753222333322 34322 2377889999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCCCCCCC
Q psy18191 208 VARNELGFARSKNATLDVAGKISTATD 234 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~~~~~~ 234 (238)
.|.|..|... ..+.|.|..++..|..
T Consensus 84 ~a~N~~g~~~-~~~~l~V~~~~~~P~~ 109 (110)
T 2dm2_A 84 MAANPQGRIS-CTGRLMVQAVNSGPSS 109 (110)
T ss_dssp EEECTTCCEE-ECCCEEEECCSCCSSC
T ss_pred EEEECCCeEE-EEEEEEEECCCCCCCC
Confidence 9999999996 5999999998877753
No 72
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=5.3e-16 Score=109.56 Aligned_cols=98 Identities=19% Similarity=0.217 Sum_probs=77.3
Q ss_pred CccCCEEEeC---CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeE
Q psy18191 128 GYRVPRITEH---PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 128 v~~~P~i~~~---~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~ 204 (238)
+..+|.|... +..+.+.+|+.+.|.|.+.|.|.|.+.|+++|..+.. ....+...++...+ .|..+..+|+|.
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~--~~~~~~~~~~~~~L--~i~~~~~~D~G~ 93 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDT--SRVHVRTSDFDTVF--FVRQAARSDSGE 93 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCC--SSCEEEECSSEEEE--EESSCCTTTCEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCC--CcEEEEECCCeEEE--EECCCChhcCEE
Confidence 5568888653 4678899999999999999999999999999998862 23333333333222 277889999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 205 YWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
|+|.|.|..|... ..+.|.|..+|+
T Consensus 94 Y~C~a~N~~G~~~-~~~~l~V~~~P~ 118 (118)
T 2e7c_A 94 YELSVQIENMKDT-ATIRIRVVEKAG 118 (118)
T ss_dssp EEEEEECSSCEEC-CEEEEEEECCCC
T ss_pred EEEEEEeCCCeEE-EEEEEEEEcCCC
Confidence 9999999999986 599999987764
No 73
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.69 E-value=4.8e-16 Score=107.56 Aligned_cols=98 Identities=28% Similarity=0.352 Sum_probs=77.1
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
...+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .......++.... +.|..+..+|+|.|+|
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~~~~-L~i~~~~~~D~G~Y~C 86 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS--ERLSFPADGAEHG-LLLTAALPTDAGVYVC 86 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEECCEETTEEE-EEESSCCGGGCEEEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCC--CcEEEEeCCCEEE-EEEccCCHHhCEEEEE
Confidence 346899998888999999999999999999999999999999988642 2222223332111 2367779999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCC
Q psy18191 208 VARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|.|..|... ..+.|.|..+|
T Consensus 87 ~a~n~~g~~~-~~~~l~V~~~P 107 (107)
T 3irg_B 87 RARNAAGEAY-AAAAVTVLEPP 107 (107)
T ss_dssp EEEETTEEEE-EEEEEEEEC--
T ss_pred EEEcCCCcEE-EEEEEEEEcCC
Confidence 9999999986 59999998754
No 74
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.69 E-value=1.6e-16 Score=121.92 Aligned_cols=139 Identities=16% Similarity=0.096 Sum_probs=78.5
Q ss_pred cEEEecccccccc--------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEe
Q psy18191 65 ICLRFQDLLPQSK--------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITE 136 (238)
Q Consensus 65 ~~~w~~~~~~~~~--------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~ 136 (238)
.+.|+|++..+.. .....|.+.++..+|+|.|+|.+.+.. | .........+. ......+|.+..
T Consensus 34 ~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~--g----~~~~s~~~~l~--V~~~~~~p~i~~ 105 (196)
T 2d3v_A 34 EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA--G----WSEPSDPLELV--VTGFYNKPTLSA 105 (196)
T ss_dssp EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT--E----ECBCCCCEEEE--EECSSCCCEEEC
T ss_pred EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC--C----cCCcCccEEEE--ecCCCCCCeEEc
Confidence 7999999875421 123567888999999999998775431 1 11111111111 111123677765
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
.+ ...+.+|+++.|.|.+.+.| |.+.|+|+|..+....... .....+...-...|..++.+|+|.|+|.|.|..+
T Consensus 106 ~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 106 LP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDS-QLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp ------------CEEEEEESSCC-SEEEEEEC---CCEEEEEC-EECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCccccccccc-ccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 54 35788999999999999998 9999999998774310010 1122221112223677899999999999999875
No 75
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.69 E-value=4.8e-17 Score=134.44 Aligned_cols=158 Identities=21% Similarity=0.273 Sum_probs=104.6
Q ss_pred CCCccEEEeccccccccce----------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc
Q psy18191 61 YPKPICLRFQDLLPQSKQG----------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR 130 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g----------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~ 130 (238)
.|.+.+.|++++..+.... ...|.+.++...|+|.|+|.+.+.. |..... ..+. +......
T Consensus 150 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~--g~~~~~------~~l~-V~~~~~~ 220 (334)
T 1ry7_B 150 NPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKF--GSIRQT------YTLD-VLERSPH 220 (334)
T ss_dssp SSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETT--EEEEEE------EEEE-EECCCCS
T ss_pred CCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCC--CCEEEE------EEEE-EecCCCC
Confidence 3567899999887543321 1257778888888999988776642 211111 1111 1111122
Q ss_pred CCEEEe-CCCceEEeCCCcEEEEEEEeeeCCCEEEEEe----CCEEeeccCCccEEEecC----------CcEEEEEeec
Q psy18191 131 VPRITE-HPASAVVPRHEPTTLNCKADGYPEPRIEWYK----DGSLVSAEIGSHRILLPA----------GSLFFLSLVH 195 (238)
Q Consensus 131 ~P~i~~-~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~----~g~~l~~~~~~~~~~~~~----------~~l~~~~vi~ 195 (238)
+|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|++ +|..+..+.......... ..|. |.
T Consensus 221 ~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~----i~ 296 (334)
T 1ry7_B 221 RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLS----LH 296 (334)
T ss_dssp SCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEE----EC
T ss_pred CCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEE----Ec
Confidence 454443 2567888999999999999999999999999 676665431111111111 1444 56
Q ss_pred CCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 196 GKKDTDSGVYWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
.+..+|+|.|+|.|.|..|... ..+.|.|...+.+.
T Consensus 297 ~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~~~~~~~ 332 (334)
T 1ry7_B 297 NVTFEDAGEYTCLAGNSIGFSH-HSAWLVVLPAEEEL 332 (334)
T ss_dssp SCCTTSCSEEEEEEEESSCCEE-EEEEEEEECSCCC-
T ss_pred cCCHHHCEEEEEEEeCCCCeEE-EEEEEEEEECCCCc
Confidence 6799999999999999999997 59999998877653
No 76
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.68 E-value=4.8e-17 Score=112.87 Aligned_cols=99 Identities=24% Similarity=0.417 Sum_probs=67.2
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
+..+|.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... ........++.|. |..+..+|+|.|+|
T Consensus 7 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~L~----i~~v~~~D~G~Y~C 81 (108)
T 3kvq_A 7 ERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVED-SGIVLKDGNRNLT----IRRVRKEDEGLYTC 81 (108)
T ss_dssp ----CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCB-TTEEEETTTTEEE----ECSCCGGGCEEEEE
T ss_pred ccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccC-CCeEEeCCCcEEE----EeecCcccCEEEEE
Confidence 457888888888999999999999999999999999999999887643 2222333345555 56669999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 208 VARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
.|.|..|... ..+.|.|.+++..+
T Consensus 82 ~a~n~~g~~~-~~~~l~V~~~~~~~ 105 (108)
T 3kvq_A 82 QACSVLGCAK-VEAFFIIEGAQEKT 105 (108)
T ss_dssp EEC----CEE-EEEEEEEEC-----
T ss_pred EEEeCCCceE-EEEEEEEeCCCccc
Confidence 9999999997 59999999887654
No 77
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.68 E-value=1.5e-15 Score=136.35 Aligned_cols=137 Identities=12% Similarity=0.111 Sum_probs=98.3
Q ss_pred CCccEEEeccccccccce-------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceec-ceecCCcc-CC
Q psy18191 62 PKPICLRFQDLLPQSKQG-------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFP-GVHGDGYR-VP 132 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~g-------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~-~~~~~v~~-~P 132 (238)
+.+.+.|++++..+.... ...|.+.++...|+|.|+|.+.+... . ..+ .+.+.+.. |+
T Consensus 494 ~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g--~-----------~~s~~~~l~V~~~p~ 560 (642)
T 1e07_A 494 QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVS--A-----------NRSDPVTLDVLYGPD 560 (642)
T ss_pred CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCC--C-----------ccCCCEEEEEEeCCC
Confidence 467899999887654322 12466677777888888877665322 1 000 11112333 44
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+.. ++.|. |..+..+|+|.|+|.|.|.
T Consensus 561 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~----------~~~L~----i~~~~~~d~G~Y~C~a~N~ 626 (642)
T 1e07_A 561 TPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQH----------TQVLF----IAKITPNNNGTYACFVSNL 626 (642)
T ss_pred cceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECcc----------CceEE----ECcccccCCeEEEEEEEec
Confidence 455667788899999999999999999999999999988753 23444 4556999999999999999
Q ss_pred CCceeEEEEEEEEc
Q psy18191 213 LGFARSKNATLDVA 226 (238)
Q Consensus 213 ~G~~~s~~~~L~V~ 226 (238)
+|... .++.|.|.
T Consensus 627 ~G~~~-~s~~l~V~ 639 (642)
T 1e07_A 627 ATGRN-NSIVKSIT 639 (642)
T ss_pred ccCcc-eeEEEEEE
Confidence 99996 48888775
No 78
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.68 E-value=4.1e-16 Score=143.62 Aligned_cols=146 Identities=22% Similarity=0.255 Sum_probs=104.8
Q ss_pred CccEEEeccccccccc----------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 63 KPICLRFQDLLPQSKQ----------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~~----------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.|++++.++... ....|.+..+...|+|.|+|.+.|.. |. ....+.+.+..+|
T Consensus 649 ~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~--g~-----------~~~~~~l~V~~~P 715 (816)
T 3dmk_A 649 PLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLA--GH-----------QQFTTPLNVYVPP 715 (816)
T ss_dssp CCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSS--CE-----------EEEEEEECEEEEE
T ss_pred CCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCC--cc-----------EEEEEEEEEEeCC
Confidence 3479999998765321 12457777888888888888776642 21 1122233356789
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeecc----CCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAE----IGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~----~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+...+.+..+.+|+++.|.|.+.|.|.|.++|++++..+... .........++.|. |..+..+|+|.|+|.
T Consensus 716 ~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~ 791 (816)
T 3dmk_A 716 RWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLH----VDNIQKTNEGYYLCE 791 (816)
T ss_dssp EEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEE----ECSCCGGGCEEEEEE
T ss_pred ceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEE----ECcCChhhCeEEEEE
Confidence 9998888899999999999999999999999999987543211 01112233456665 566699999999999
Q ss_pred EEeCCCceeEEEEEEEEc
Q psy18191 209 ARNELGFARSKNATLDVA 226 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~ 226 (238)
|.|.+|...+ .+.+..+
T Consensus 792 a~N~~G~~~~-~v~~~~~ 808 (816)
T 3dmk_A 792 AINGIGSGLS-AVIMISV 808 (816)
T ss_dssp EECSSSSCEE-EEEEEEE
T ss_pred EEeCCCCCcE-EEEEEEe
Confidence 9999999986 6555543
No 79
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.68 E-value=2.8e-17 Score=126.47 Aligned_cols=150 Identities=17% Similarity=0.205 Sum_probs=100.6
Q ss_pred CCccEEEeccccccc-------------cceE----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce
Q psy18191 62 PKPICLRFQDLLPQS-------------KQGL----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV 124 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~-------------~~g~----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~ 124 (238)
+.+.+.|++++..+. ...+ ..|.+.++...|+|.|+|.+.+.. |. ......+
T Consensus 32 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~--g~---------~~~~~~~ 100 (209)
T 1nbq_A 32 SSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEG--GN---------SYGEVKV 100 (209)
T ss_dssp SSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEETT--SS---------CEECCEE
T ss_pred CCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEecCC--CC---------ccceEEE
Confidence 567899999875421 0011 357788888999999997765531 10 0011122
Q ss_pred ecCCccCCEEEeCCCceEEeCCCcEEEEEEE-eeeCCCEEEEEeCCEEeeccCCc------cEEE--ecCCcEEEEEeec
Q psy18191 125 HGDGYRVPRITEHPASAVVPRHEPTTLNCKA-DGYPEPRIEWYKDGSLVSAEIGS------HRIL--LPAGSLFFLSLVH 195 (238)
Q Consensus 125 ~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~------~~~~--~~~~~l~~~~vi~ 195 (238)
.+.+..+|.+...+....+..|+.+.|.|.+ .|.|.|.+.|++++..+...... .... ...+.|. |.
T Consensus 101 ~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~----i~ 176 (209)
T 1nbq_A 101 KLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELV----FD 176 (209)
T ss_dssp ECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEE----ES
T ss_pred EEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEE----EE
Confidence 2334566766555556778999999999997 89999999999999887653111 1111 1344555 56
Q ss_pred CCCCCCCeEEEEEEEeCCCce-eEEEEEEEEc
Q psy18191 196 GKKDTDSGVYWCVARNELGFA-RSKNATLDVA 226 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~-~s~~~~L~V~ 226 (238)
.+..+|+|.|+|.|.|..|.. .+..+.|.|.
T Consensus 177 ~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 177 PLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp SCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred eccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 669999999999999999998 3345566653
No 80
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.68 E-value=3.1e-16 Score=110.50 Aligned_cols=102 Identities=54% Similarity=0.891 Sum_probs=80.2
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCC---ccEEEecCCcEEEEEe-ecCCCCCCCe
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIG---SHRILLPAGSLFFLSL-VHGKKDTDSG 203 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~---~~~~~~~~~~l~~~~v-i~~v~~~d~G 203 (238)
+..+|.|...|....+.+|+.+.|.|.+.|.|.|.+.|++++..+..... .......++.+.++.+ +..++.+|+|
T Consensus 6 ~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G 85 (117)
T 2v9t_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (117)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCE
T ss_pred ccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCE
Confidence 45789999988899999999999999999999999999999998875321 2344555666654332 2356789999
Q ss_pred EEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 204 VYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|+|.|.|..|...+..+.|.+....
T Consensus 86 ~Y~C~a~N~~G~~~s~~~~l~~~~~~ 111 (117)
T 2v9t_A 86 VYVCVARNYLGEAVSHDASLEVAAAA 111 (117)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC---
T ss_pred EEEEEEEeCccceEeeeEEEEhhhhh
Confidence 99999999999998778888886543
No 81
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.68 E-value=2e-17 Score=127.64 Aligned_cols=125 Identities=16% Similarity=0.125 Sum_probs=82.5
Q ss_pred EEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEE-eeeCCC
Q psy18191 83 LVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKA-DGYPEP 161 (238)
Q Consensus 83 l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~-~g~P~p 161 (238)
|.+.++..+|+|.|+|.+.+.. | .....+.+.+..+|.+...+....+.+|+.+.|.|.+ .|.|.|
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~--~-----------~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~ 152 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAP--G-----------VANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPL 152 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETT--E-----------EEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSC
T ss_pred EEEccCChhhCeEEEEEEEeCC--C-----------ccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCC
Confidence 5666777777777776654421 1 1111222224455554333333447889999999999 899999
Q ss_pred EEEEEeCC--EEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 162 RIEWYKDG--SLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 162 ~i~W~~~g--~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
.+.|++++ ..+.. .......++.|. |..+..+|+|.|+|.|.|..|... ..+.|.|..+
T Consensus 153 ~v~W~~~~~~~~~~~---~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~~P 213 (214)
T 3jz7_A 153 QFEWQKLSDSQTMPT---PWLAEMTSPVIS----VKNASSEYSGTYSCTVQNRVGSDQ-CMLRLDVVPP 213 (214)
T ss_dssp EEEEEECSTTCCCCG---GGGGGTTSSEEE----ECSCCGGGCEEEEEEEECSSCEEE-EEEEECCBCC
T ss_pred EEEEEECCCCCccCc---cceeccCCCEEE----EecCCHHHCEEEEEEEEcCCCcEE-EEEEEEEeCC
Confidence 99999954 33331 111122345554 566699999999999999999996 5999998744
No 82
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.68 E-value=1.1e-15 Score=113.16 Aligned_cols=102 Identities=25% Similarity=0.359 Sum_probs=79.2
Q ss_pred CCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEe-cCCcEEEEEeecCCCCCCCeEE
Q psy18191 127 DGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILL-PAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 127 ~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
.+..+|.|...+.++.+..|+.+.|.|.+.|.|.|.+.|++++..+... ....+.. .++... +.|..+...|+|.|
T Consensus 37 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~-~~~~~~~~~~~~~~--L~I~~v~~~D~G~Y 113 (154)
T 1fhg_A 37 KPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES-RHFQIDYDEEGNCS--LTISEVCGDDDAKY 113 (154)
T ss_dssp CCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCS-SSEEEEECTTCEEE--EEESSCCGGGCEEE
T ss_pred cCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCC-CcEEEEECCCCeEE--EEECCCChhcCEEE
Confidence 3667899999888999999999999999999999999999999988753 2222222 223222 23778899999999
Q ss_pred EEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 206 WCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 206 ~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
+|.|.|..|... ..+.|.|..++...
T Consensus 114 ~C~a~N~~G~~~-~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 114 TCKAVNSLGEAT-CTAELLVETMGKEG 139 (154)
T ss_dssp EEEEEETTEEEE-EEEEEEEECC----
T ss_pred EEEEEECCCeEE-EEEEEEEeCcCcCC
Confidence 999999999986 59999998776543
No 83
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.68 E-value=6.4e-16 Score=130.67 Aligned_cols=156 Identities=17% Similarity=0.220 Sum_probs=104.6
Q ss_pred CCCccEEEecccccccc---ce------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceec-CCcc
Q psy18191 61 YPKPICLRFQDLLPQSK---QG------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHG-DGYR 130 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~---~g------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~-~v~~ 130 (238)
.+.+.+.|++++..+.. .. ...|.+..+..+|+|.|+|.+.+... ... .....+..... ....
T Consensus 148 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~--~~~-----~~~~~l~v~~~p~~~~ 220 (403)
T 3laf_A 148 DPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPAS--TRT-----GNEAEVRILSDPGLHR 220 (403)
T ss_dssp SSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSC--CCB-----CCCEEEEEECCCCCCE
T ss_pred cCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCC--cee-----ccceeEEEecCCCccc
Confidence 34678999998875421 11 12466778888888888877665321 100 00111111100 0111
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
++.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ........++.|. |..+..+|+|.|+|.|.
T Consensus 221 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a~ 295 (403)
T 3laf_A 221 QLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLR-SKKYSLLGGSNLL----ISNVTDDDSGTYTCVVT 295 (403)
T ss_dssp EEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCS-SSSEEEETTTEEE----ECSCCGGGCEEEEEEEE
T ss_pred CceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCC-CceEEECCccEEE----EeCCCHHHCEEEEEEEE
Confidence 234556677888999999999999999999999999999888653 2333334455555 56669999999999999
Q ss_pred eCCCceeEEEEEEEEccCC
Q psy18191 211 NELGFARSKNATLDVAGKI 229 (238)
Q Consensus 211 N~~G~~~s~~~~L~V~~~~ 229 (238)
|..|... ..+.|.|..++
T Consensus 296 n~~g~~~-~~~~l~V~~~p 313 (403)
T 3laf_A 296 YKNENIS-ASAELTVLVPP 313 (403)
T ss_dssp ETTEEEE-EEEEEEEEEEE
T ss_pred cCCCceE-EEEEEEEECCC
Confidence 9999985 58888886654
No 84
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.67 E-value=3.3e-16 Score=120.27 Aligned_cols=150 Identities=14% Similarity=0.054 Sum_probs=90.3
Q ss_pred cEEEecccccccc--------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEe
Q psy18191 65 ICLRFQDLLPQSK--------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITE 136 (238)
Q Consensus 65 ~~~w~~~~~~~~~--------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~ 136 (238)
.+.|+|++..+.. .....|.+.++...|+|.|+|.+.+... | .........+. ......+|.+..
T Consensus 34 ~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~-g----~~~~s~~~~l~--V~~~~~~p~i~~ 106 (198)
T 1ugn_A 34 EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTA-G----RSESSDPLELV--VTGAYIKPTLSA 106 (198)
T ss_dssp CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTT-E----ECCCCCCEEEE--EECSSCCCEEEE
T ss_pred EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCC-C----cccCCccEEEE--EcccccCCcccc
Confidence 5999999875421 1123577889999999999987765320 1 11111111111 111123566665
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecC---CcEEEEEeecCCCCCCCeEEEEEEEeCC
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPA---GSLFFLSLVHGKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---~~l~~~~vi~~v~~~d~G~Y~C~a~N~~ 213 (238)
.+ ...+.+|+++.|.|.+.|. .|.+.|+|+|..+............+ +.|. |..++.+|+|.|+|.|.|..
T Consensus 107 ~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~D~G~Y~C~a~n~~ 180 (198)
T 1ugn_A 107 QP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFS----VGPVSPSRRWWYRCYAYDSN 180 (198)
T ss_dssp ES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEE----ECCCCTTSCEEEEEEEECTT
T ss_pred CC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEE----ecccCcccCeEEEEEEEeCC
Confidence 44 3678899999999999988 78999999998775320000111111 2333 67779999999999999987
Q ss_pred Cce----eEEEEEEEEcc
Q psy18191 214 GFA----RSKNATLDVAG 227 (238)
Q Consensus 214 G~~----~s~~~~L~V~~ 227 (238)
+.. .+..+.|.|.+
T Consensus 181 ~~~~~s~~S~~~~l~V~g 198 (198)
T 1ugn_A 181 SPYEWSLPSDLLELLVLG 198 (198)
T ss_dssp STTEECCCCCCEEEEEEC
T ss_pred CCccccCcCceEEEEecC
Confidence 632 24577887753
No 85
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.67 E-value=1.3e-16 Score=133.22 Aligned_cols=150 Identities=13% Similarity=0.063 Sum_probs=101.1
Q ss_pred CCCccEEEecccccccc-------ceEEEEEcCCCCCCCCC-ceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 61 YPKPICLRFQDLLPQSK-------QGLMYLVGSQASPDYPN-RFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~-------~g~~~l~~~~~~~~~~g-~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.+.|++++..... .....+.+.++...|+| .|+|.+.+.. |. ....+...+..+|
T Consensus 185 ~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~--g~-----------~~~~~~l~V~~~P 251 (347)
T 2ifg_A 185 RGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDV--GR-----------AEVSVQVNVSFPA 251 (347)
T ss_dssp SSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETT--EE-----------CCEEECCCCBEEE
T ss_pred CCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCC--CC-----------EEEEEEEEEcCCC
Confidence 34678899998864321 12346777888899999 9997766532 21 1112233355777
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecC-----CcEEEEEeecCCCCCCCeEEEE
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPA-----GSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~-----~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
.+ . .....+|+.+.|.|.+.|.|.|.+.|+++|..+... ......... ....-...|..++.+|+|.|+|
T Consensus 252 ~i-~---~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C 326 (347)
T 2ifg_A 252 SV-Q---LHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNET-SFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTL 326 (347)
T ss_dssp EE-E---ECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCC-SSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEE
T ss_pred ee-e---eccCccCceEEEEEEeeecCCCcEEEEeCCEECCCC-cceeeEEEeecCCCcccceEEEECCCCcccCceEEE
Confidence 76 1 112357899999999999999999999999988743 111111111 1111122367779999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCC
Q psy18191 208 VARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|.|.+|... ..+.|.|.++|
T Consensus 327 ~a~N~~G~~~-~~~~l~V~~~P 347 (347)
T 2ifg_A 327 LAANPFGQAS-ASIMAAFMDNP 347 (347)
T ss_dssp EEEETTEEEE-EEEEECSCCCC
T ss_pred EEecCCCcee-eEEEEEecCCC
Confidence 9999999996 59999987654
No 86
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.67 E-value=1.2e-15 Score=104.06 Aligned_cols=96 Identities=18% Similarity=0.339 Sum_probs=75.3
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.............+.... +.|..+..+|+|.|+|.|
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~-L~i~~v~~~D~G~Y~C~a 82 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTT-LIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEE-EEESSCCGGGCEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEE-EEEeecCcccCEEEEEEE
Confidence 5778877788889999999999999999999999999999988643223333333322221 236788999999999999
Q ss_pred EeCCCceeEEEEEEEEcc
Q psy18191 210 RNELGFARSKNATLDVAG 227 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~ 227 (238)
.|..|... ..+.|.|.+
T Consensus 83 ~n~~g~~~-~~~~l~V~~ 99 (100)
T 3irg_A 83 GNEFGSDS-ATVNIHIRS 99 (100)
T ss_dssp EETTEEEE-EEEEEEEEC
T ss_pred EeCCCcEE-EEEEEEEEe
Confidence 99999986 599998864
No 87
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=1.3e-16 Score=109.08 Aligned_cols=92 Identities=24% Similarity=0.373 Sum_probs=74.1
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
+..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+... ..........|. |..+..+|+|.|+|
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~--~~~~~~~~~~L~----i~~v~~~D~G~Y~C 81 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYA--RSTCEAGVAELH----IQDALPEDHGTYTC 81 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSC--CCEEETTEEEEE----ECSCCTTCCBCEEE
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECccc--ceEeeCCeEEEE----ECCCChhhCEEEEE
Confidence 457899998888999999999999999999999999999999887642 222221112333 67779999999999
Q ss_pred EEEeCCCceeEEEEEEEEc
Q psy18191 208 VARNELGFARSKNATLDVA 226 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~ 226 (238)
.|.|..|... ..+.|.|+
T Consensus 82 ~a~N~~g~~~-~~~~l~V~ 99 (99)
T 2yr3_A 82 LAENALGQVS-CSAWVTVH 99 (99)
T ss_dssp EEECSSCEEE-EECCEEEC
T ss_pred EEEECCCeEE-EEEEEEEC
Confidence 9999999986 58888874
No 88
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2.6e-16 Score=111.14 Aligned_cols=97 Identities=33% Similarity=0.423 Sum_probs=79.7
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..+|.|...+.+..+.+|+++.|.|.+.|.|.|.+.|+++|..+... ........++.|. |..+..+|+|.|+|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~-~~~~~~~~~~~L~----i~~v~~~D~G~Y~C~ 80 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQ-DSRIKQLENGVLQ----IRYAKLGDTGRYTCI 80 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTT-STTEEEEETTEEE----EESCCGGGCCCEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCC-CCeEEEccCCEEE----EccCCcCCCEEEEEE
Confidence 36788888888899999999999999999999999999999888643 2334445567666 455599999999999
Q ss_pred EEeCCCceeEEEEEEEEccCCCC
Q psy18191 209 ARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
|.|..|... ..+.|.|...+.+
T Consensus 81 a~n~~g~~~-~~~~l~V~~~~~p 102 (118)
T 2eo9_A 81 ASTPSGEAT-WSAYIEVQEFGVP 102 (118)
T ss_dssp EECSSCEEE-EECCEEEECCSCC
T ss_pred EEcCCCcEE-EEEEEEEEeCCCC
Confidence 999999986 5899999876543
No 89
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.66 E-value=1.6e-15 Score=125.50 Aligned_cols=152 Identities=11% Similarity=0.030 Sum_probs=100.6
Q ss_pred CccEEEeccccccccce--E----EEEEcCCCCCCCCCceEEEeCCC--cccCCceEEeCCCCcceecceecCCccCC--
Q psy18191 63 KPICLRFQDLLPQSKQG--L----MYLVGSQASPDYPNRFSLCNNKT--WQKGLPLKKYHPPSLPLFPGVHGDGYRVP-- 132 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~~g--~----~~l~~~~~~~~~~g~y~~~~~~~--~~~G~y~c~~~~~~~~~~~~~~~~v~~~P-- 132 (238)
.+.+.|++++..+...+ . ..|.+.++..+|+|.|+|.+.+. .....+... ..+.+.+..+|
T Consensus 158 ~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s---------~~~~l~V~~~~~~ 228 (329)
T 3oq3_B 158 YNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVS---------RCKILTVIPSQDH 228 (329)
T ss_dssp CCEEEEEETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEE---------EEEEEEEECCCCC
T ss_pred CceEEEEECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEE---------eeEEEEEECCCCC
Confidence 68899999988654221 1 35777889999999999877753 221111100 01111122333
Q ss_pred --EEEeCCCceEEeCCCcEEEEEEEeeeC---CC-EEEEEeCCEEeeccCCccEEE--ecCCcEEEEEeecCCCCCCCe-
Q psy18191 133 --RITEHPASAVVPRHEPTTLNCKADGYP---EP-RIEWYKDGSLVSAEIGSHRIL--LPAGSLFFLSLVHGKKDTDSG- 203 (238)
Q Consensus 133 --~i~~~~~~~~~~~G~~~~L~C~~~g~P---~p-~i~W~~~g~~l~~~~~~~~~~--~~~~~l~~~~vi~~v~~~d~G- 203 (238)
.+. .+....+.+|+.+.|.|.+.|.| .| .+.|+++|..+.......... .........+.|..+..+|+|
T Consensus 229 ~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 307 (329)
T 3oq3_B 229 RFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGN 307 (329)
T ss_dssp CEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTC
T ss_pred CCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCC
Confidence 333 56678899999999999999998 78 899999998753321211111 111112223347888999999
Q ss_pred EEEEEEEeCCCceeEEEEEEEE
Q psy18191 204 VYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
.|+|.|.|..|... ..+.|.|
T Consensus 308 ~Y~C~a~N~~G~~~-~~~~l~v 328 (329)
T 3oq3_B 308 TYTCRGHNYYFDKT-LTTTVVL 328 (329)
T ss_dssp EEEEEEECSSCEEE-EEEEEEE
T ss_pred cEEEEEEecCCceE-EEEEEEe
Confidence 99999999999996 4888876
No 90
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.66 E-value=8.8e-16 Score=119.38 Aligned_cols=159 Identities=12% Similarity=0.056 Sum_probs=94.9
Q ss_pred CCccEEEecc---ccccccc-eE-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 62 PKPICLRFQD---LLPQSKQ-GL-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 62 ~~~~~~w~~~---~~~~~~~-g~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
|.+.+.|++. +..+... .+ ..|.+.++..+|+|.|+|.+.+.. +. .. .....+. .. ...+|
T Consensus 36 p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~--~~-~~----s~~~~l~--v~-~~~~p 105 (213)
T 2x1w_L 36 SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKIND--ES-YQ----SIMYIVV--VV-GYRIY 105 (213)
T ss_dssp TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC------C-EE----CCCEEEE--EC-BCCEE
T ss_pred CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECC--ee-EE----EEEEEEE--Ee-CCccc
Confidence 4578899884 4433211 11 236778888999999998776521 10 00 0101111 11 12345
Q ss_pred EEEeC-CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCCEEeeccCC-ccEEEecC----CcEEEEEeecCCCCCCCeE
Q psy18191 133 RITEH-PASAVVPRHEPTTLNCKADGYP--EPRIEWYKDGSLVSAEIG-SHRILLPA----GSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 133 ~i~~~-~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g~~l~~~~~-~~~~~~~~----~~l~~~~vi~~v~~~d~G~ 204 (238)
.+... +..+.+.+|+++.|.|.+.|.| .+.+.|++++..+..... ........ ......+.|..++.+|+|.
T Consensus 106 ~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 185 (213)
T 2x1w_L 106 DVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGL 185 (213)
T ss_dssp EEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEE
T ss_pred ceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEE
Confidence 45444 4445899999999999999865 457999999876432100 00000001 1112223478889999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEccCCCC
Q psy18191 205 YWCVARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
|+|.|.|..|... ..+.|.|..++-+
T Consensus 186 Y~C~a~N~~g~~~-~~~~l~V~~~p~i 211 (213)
T 2x1w_L 186 YTCAASSGLMTKK-NSTFVRVHEDPIE 211 (213)
T ss_dssp EEEEEECSSCEEE-EEEEEEEEC----
T ss_pred EEEEEecCCCcEE-EEEEEEEeccccc
Confidence 9999999999996 6999999877643
No 91
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.66 E-value=2.1e-16 Score=123.75 Aligned_cols=151 Identities=15% Similarity=0.096 Sum_probs=96.5
Q ss_pred CccEEEecccccccc--------ceEE--EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 63 KPICLRFQDLLPQSK--------QGLM--YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~--------~g~~--~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.|+|++..... .... .|.+.++..+|+|.|+|.+.+.. | .........+. ......+|
T Consensus 36 ~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~--~----~~~~s~~~~l~--V~~~~~~P 107 (218)
T 1uct_A 36 AYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGH--Y----RFRYSDTLELV--VTGLYGKP 107 (218)
T ss_dssp CSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETT--T----EEEECCCEEEE--EECSSCCC
T ss_pred CCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCC--C----ceeecCCEEEE--EcCcccCC
Confidence 567999999874321 1112 57788888999999998776531 1 00001111111 11123467
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
.+...+ ...+.+|++++|.|.+.+.|.|.+.|+|+|..+.. .......++.|. |..++.+|+|.|+|.|.|.
T Consensus 108 ~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~---~~~~~~~~~~L~----I~~v~~~D~G~Y~C~a~n~ 179 (218)
T 1uct_A 108 FLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLP---QHQSGEHPANFS----LGPVDLNVSGIYRCYGWYN 179 (218)
T ss_dssp EEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCC---SEEECSSSEEEE----CCSCCGGGCEEEEEEEECT
T ss_pred EEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccc---cccCCCccCEEE----EccCCcccCEEEEEEEEcC
Confidence 777665 46789999999999777778899999999987653 111112233443 6777999999999999986
Q ss_pred CC----ceeEEEEEEEEccCC
Q psy18191 213 LG----FARSKNATLDVAGKI 229 (238)
Q Consensus 213 ~G----~~~s~~~~L~V~~~~ 229 (238)
.+ +..|..+.|.|.+.+
T Consensus 180 ~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 180 RSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp TSTTEECCCCCCEEEEEC---
T ss_pred CCCCcCCCCCCcEEEEEecCC
Confidence 42 234568899998765
No 92
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.66 E-value=5.3e-16 Score=116.94 Aligned_cols=139 Identities=14% Similarity=0.137 Sum_probs=97.9
Q ss_pred ccEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEE
Q psy18191 64 PICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVV 143 (238)
Q Consensus 64 ~~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~ 143 (238)
..+.|++++..+... ...|.+.++..+|+|.|+|...+... .....+. +..++.+... ....+
T Consensus 35 ~~i~W~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~~~~~~~----------s~~~~l~-----V~~~~~~~~~-~~~~~ 97 (176)
T 1f2q_A 35 SSTKWFHNGSLSEET-NSSLNIVNAKFEDSGEYKCQHQQVNE----------SEPVYLE-----VFSDWLLLQA-SAEVV 97 (176)
T ss_dssp -CCEEEETTEECSCC-SSEEEECSCCGGGCEEEEEECTTSSC----------CCCEEEE-----EECSSEEEEE-SCSEE
T ss_pred ceEEEEECCeECCCC-ceEEEEeccceecCEEEEEEcCCccc----------cccEEEE-----EeCcceeecC-Cccee
Confidence 368999998866543 34567788999999999987765321 0111111 2234444443 34677
Q ss_pred eCCCcEEEEEEE-eeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEE
Q psy18191 144 PRHEPTTLNCKA-DGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNAT 222 (238)
Q Consensus 144 ~~G~~~~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~ 222 (238)
.+|+.+.|.|.+ .+.|.|.+.|+++|..+... ..++.|. |..+..+|+|.|+|.|.|..|...+..+.
T Consensus 98 ~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-------~~~~~L~----i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~ 166 (176)
T 1f2q_A 98 MEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW-------YENHNIS----ITNATVEDSGTYYCTGKVWQLDYESEPLN 166 (176)
T ss_dssp ETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC-------CCSSEEE----ESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred eCCCCEEEEEEecCCCCceEEEEEECCEEEeee-------cCCCeEE----ECCCCcccCEEEEEEEEeCCcceEecCEE
Confidence 899999999999 46677899999999887532 1234444 56669999999999999987666566789
Q ss_pred EEEccCCC
Q psy18191 223 LDVAGKIS 230 (238)
Q Consensus 223 L~V~~~~~ 230 (238)
|.|.+++.
T Consensus 167 l~V~~~p~ 174 (176)
T 1f2q_A 167 ITVIKAPR 174 (176)
T ss_dssp EEEECSCC
T ss_pred EEEecCCC
Confidence 99988764
No 93
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.66 E-value=2.2e-16 Score=122.32 Aligned_cols=155 Identities=16% Similarity=0.132 Sum_probs=90.8
Q ss_pred CCccEEEeccccccccc--eEEEEEcCCCCCCCCCceEEEeCCCcccCCceE-EeCCC-Ccceecce-----------ec
Q psy18191 62 PKPICLRFQDLLPQSKQ--GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLK-KYHPP-SLPLFPGV-----------HG 126 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~--g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c-~~~~~-~~~~~~~~-----------~~ 126 (238)
+.+.+.|+|++..+... ....|.+..+..+|+|.|+|.+++. . ....- .+... ........ ..
T Consensus 28 p~~~i~W~k~g~~l~~~~~~~~~L~i~~v~~~DsG~Y~C~~~~~-~-s~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (204)
T 1sy6_A 28 EAKNITWFKDGKMIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQN-K-SKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKK 105 (204)
T ss_dssp CSSEEEEEETTEEEEEEESSCCCEEEEEGGGCCEEEEEEESSSS-C-CCCEEEEEEC-----------------------
T ss_pred CCCEEEEEECCEECCCCCCCCCeEEeCCCCcCCCEEEEEEecCC-C-CeeEEEEEEEecccccccccccccccccccccc
Confidence 56789999999865431 1234566788889999999774431 1 10000 00000 00000000 00
Q ss_pred ---C-CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCC-CCCC
Q psy18191 127 ---D-GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGK-KDTD 201 (238)
Q Consensus 127 ---~-v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v-~~~d 201 (238)
. ...+|.+...|. ....+|+++.|.|. |.|.|.+.|++++..+........+...++.|. |..+ ..+|
T Consensus 106 ~~~~~~~~~~~~~~~p~-~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~~L~----I~~v~~~~D 178 (204)
T 1sy6_A 106 DGSDGNEEMGGITQTPY-KVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLS----LKEFSELEQ 178 (204)
T ss_dssp -------------CCCC-EEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETTEEE----ETTCCHHHH
T ss_pred ccccccccccceecCCc-eeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCCEEE----EeeCCcccc
Confidence 0 001233332222 22338999999999 889999999999998865322222333466665 7888 8999
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEE
Q psy18191 202 SGVYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
+|.|+|.|.|..|...+..++|.|
T Consensus 179 ~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 179 SGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp CEEEEEEETTSCGGGSSCEEEEEE
T ss_pred CEEEEEEeccCCCCceeEEEEEEE
Confidence 999999999999985344666665
No 94
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.66 E-value=4.4e-16 Score=118.81 Aligned_cols=137 Identities=11% Similarity=0.049 Sum_probs=85.6
Q ss_pred cEEEeccccccccceEEEEEcCC-CCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce-------ecCCccCCEEEe
Q psy18191 65 ICLRFQDLLPQSKQGLMYLVGSQ-ASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV-------HGDGYRVPRITE 136 (238)
Q Consensus 65 ~~~w~~~~~~~~~~g~~~l~~~~-~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~-------~~~v~~~P~i~~ 136 (238)
.+.|+|++..+....-..|.+.+ +..+|+|.|+|.+.+... ................. ...+..+|.+..
T Consensus 28 ~i~W~k~g~~l~~~~~~~L~I~~~~~~~D~G~Y~C~a~n~~g--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (186)
T 1jbj_A 28 NLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNK--NTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGS 105 (186)
T ss_dssp TCEEEETTEEECSCCCSEEEEESCCTTTSCEEEEEECSSCCC--CCCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCC
T ss_pred ceEEEECCEECCCCCCCEEEECCCCccccCEEEEEEEEeCCC--cEEEEEEEEEecccccccccccccccccCCcccccc
Confidence 48999999866553333577888 999999999988777432 22221111100000000 000111111111
Q ss_pred C----CCce---EEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 137 H----PASA---VVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 137 ~----~~~~---~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
. .... .+.+|+++.|.|.+ |.|.++|+|+|..+... . ...+.|.+..+ ..+|+|.|+|.|
T Consensus 106 ~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~--~----~~~~~L~i~~v----~~~D~G~Y~C~a 172 (186)
T 1jbj_A 106 QTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPL--N----ATKNTWNLGNN----AKDPRGTYQCQG 172 (186)
T ss_dssp SCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCS--S----CCSSCCEEEET----TSCCEEEEEEEE
T ss_pred ccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECccc--C----CCcceEEECCC----CcCcCEEEEEEE
Confidence 0 0112 23489999999998 88999999999988642 1 13566765554 999999999999
Q ss_pred EeCCCce
Q psy18191 210 RNELGFA 216 (238)
Q Consensus 210 ~N~~G~~ 216 (238)
.|..|..
T Consensus 173 ~N~~g~~ 179 (186)
T 1jbj_A 173 AKETSNP 179 (186)
T ss_dssp SSCEEEE
T ss_pred EcCcCCc
Confidence 9998866
No 95
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.66 E-value=7.9e-16 Score=116.64 Aligned_cols=115 Identities=10% Similarity=0.033 Sum_probs=84.3
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEP 161 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p 161 (238)
.|.+.++..+|+|.|+|...+.. | . ..+. +. .+.. +....+.+|+++.|.|.+.+.|.|
T Consensus 69 ~L~i~~v~~~D~G~Y~C~~~~~~--~----~------~~l~-----V~---~~~~-~~~~~v~~g~~~~l~C~~~~~p~~ 127 (184)
T 2ny1_B 69 PLIIKNLKIEDSDTYICEVEDQK--E----E------VQLL-----VF---GLTA-NSDTHLLQGQSLTLTLESPPGSSP 127 (184)
T ss_dssp CEEECSCCGGGCEEEEEEETTEE--E----E------EEEE-----EE---EEEE-SSCSEEETTCCEEEEEECCTTCCC
T ss_pred EEEEecCCHHHCEEEEEEEEcCC--C----c------EEEE-----EE---EecC-CCCceeecCCCEEEEEEcCCCCCC
Confidence 47778888888888887766531 1 0 0111 11 1222 345678999999999999999999
Q ss_pred EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCC
Q psy18191 162 RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 162 ~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
.+.|++++..+. ...+.|. |..+..+|+|.|+|.|.|..|... ..+.|.|.+.++.
T Consensus 128 ~v~W~~~~~~~~---------~~~~~L~----i~~v~~~d~G~Y~C~a~n~~~~~~-~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 128 SVQCRSPRGKNI---------QGGKTLS----VSQLELQDSGTWTCTVLQNQKKVE-FKIDIVVLAFQKA 183 (184)
T ss_dssp EEEEECTTSCEE---------EESSEEE----ESSCCGGGCEEEEEEEEETTEEEE-EEEEEEEECCCC-
T ss_pred EEEEEeCCCccc---------cCceEEE----EecCCcCCCeEEEEEEEECCceEE-EEEEEEEEecCCC
Confidence 999999875542 2345565 566699999999999999999986 5999999887764
No 96
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.65 E-value=1.4e-15 Score=105.01 Aligned_cols=98 Identities=16% Similarity=0.240 Sum_probs=70.7
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEE--Ee-cCCcEEEEEeecCCCCCCCeEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRI--LL-PAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~--~~-~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
..||.|..... ...+..+.|.|.+.|.|.|.++|+++|..+..+ ..... .. ........+.|..+..+|+|.|
T Consensus 2 ~~pP~i~~~~~---~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 77 (103)
T 1wwb_X 2 HFAPTITFLES---PTSDHHWCIPFTVKGNPKPALQWFYNGAILNES-KYICTKIHVTNHTEYHGCLQLDNPTHMNNGDY 77 (103)
T ss_dssp CCCCCCCCCCC---CCCCCEEEEEEEEECSSCCEEEEEETTEEECCC-SSEEEEEEEECSSEEEEEEEEESCCGGGCEEE
T ss_pred CCCCEEEeccC---ceECcEEEEEEEEEEeCCCEEEEEECCEECCCC-CcEeEEEEecCCcEEEEEEEECCCCcccCEEE
Confidence 46777643222 245788999999999999999999999998754 21111 11 1222112233677799999999
Q ss_pred EEEEEeCCCceeEEEEEEEEccCCCC
Q psy18191 206 WCVARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 206 ~C~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
+|.|.|.+|... .++.|.|..+|.+
T Consensus 78 ~C~A~N~~G~~~-~~~~l~V~~~P~~ 102 (103)
T 1wwb_X 78 TLIAKNEYGKDE-KQISAHFMGWPGI 102 (103)
T ss_dssp EEEEECSSCEEE-EEEEECCSCCCCC
T ss_pred EEEEEeCCCcEe-EEEEEEECCCCCC
Confidence 999999999997 5999999887754
No 97
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.65 E-value=7.8e-16 Score=124.60 Aligned_cols=104 Identities=15% Similarity=0.154 Sum_probs=72.9
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecC--CcEEEEEeecCCCCCCCeEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPA--GSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~--~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
.+|.+...+....+.+|+++.|.|.+.|.|.|.+.|++++................ ......+.|..+..+|+|.|+|
T Consensus 180 ~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 259 (289)
T 3mjg_X 180 SSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTC 259 (289)
T ss_dssp CCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEE
T ss_pred CCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEE
Confidence 46777666666789999999999999999999999998765433211111111111 1122233478889999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCCCCCCC
Q psy18191 208 VARNELGFARSKNATLDVAGKISTATD 234 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~~~~~~ 234 (238)
.|.|.+|... .++.|.|.+.+.....
T Consensus 260 ~a~N~~G~~~-~~~~l~v~~~~~~~~~ 285 (289)
T 3mjg_X 260 NVTESVNDHQ-DEKAINITVVESGHHH 285 (289)
T ss_dssp EEEETTTTEE-EEEEEEEEEEC-----
T ss_pred EeecCCCCce-eEEEEEEEEEecCccc
Confidence 9999999997 5999999887765443
No 98
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.65 E-value=2.2e-16 Score=120.14 Aligned_cols=146 Identities=15% Similarity=0.119 Sum_probs=94.6
Q ss_pred CCccEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCce
Q psy18191 62 PKPICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASA 141 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~ 141 (238)
+.+.+.|+|++... ..+...|.+.++..+|+|.|+|.+.+... .........+. ......+|.+...+ ..
T Consensus 34 ~~~~~~W~k~g~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g------~~~~s~~~~l~--V~~~~~~p~i~~~p-~~ 103 (184)
T 2gi7_A 34 GVDLYRLEKLSSSR-YQDQAVLFIPAMKRSLAGRYRCSYQNGSL------WSLPSDQLELV--ATGVFAKPSLSAQP-GP 103 (184)
T ss_dssp TCSEEEEEETTTCC-EESSSEEEESSCCGGGCEEEEEEEEETTE------EBCCCCCEEEE--EESSSCCCEEEEEC-CC
T ss_pred CCCEEEEEECCccc-cCcccEEEECcCChhhCceEEEEEEcCCC------ccCCCCCEEEE--ecCcCCCCEEEeCC-Cc
Confidence 34679999998752 12233577889999999999987765321 11111111111 11123467777665 45
Q ss_pred EEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCc----ee
Q psy18191 142 VVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGF----AR 217 (238)
Q Consensus 142 ~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~----~~ 217 (238)
.+.+|+.+.|.|.+.+.| +.+.|+|+|..+... .......+.|.+..+ +.+|+|.|+|.|.|..+. ..
T Consensus 104 ~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~---~~~~~~~~~L~i~~v----~~~D~G~Y~C~a~n~~~~~~~s~~ 175 (184)
T 2gi7_A 104 AVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYK---NPERWYRASFPIITV----TAAHSGTYRCYSFSSRDPYLWSAP 175 (184)
T ss_dssp SSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSC---CCCEEEEESSSEEEE----TTCCSEEEEEEEECTTSTTBCCCC
T ss_pred eecCCCcEEEEEEcCCCC-cEEEEEECCCcCcce---ecCCCceEEEEEccC----CccCCeEEEEEEEeCCCCcccCCC
Confidence 677999999999987655 699999999876532 111223455665555 999999999999998643 23
Q ss_pred EEEEEEEE
Q psy18191 218 SKNATLDV 225 (238)
Q Consensus 218 s~~~~L~V 225 (238)
|..+.|.|
T Consensus 176 S~~~~l~V 183 (184)
T 2gi7_A 176 SDPLELVV 183 (184)
T ss_dssp CCCEEEEC
T ss_pred CCcEEEEe
Confidence 44666654
No 99
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.65 E-value=4.5e-16 Score=121.92 Aligned_cols=133 Identities=13% Similarity=0.108 Sum_probs=81.0
Q ss_pred EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEee-e
Q psy18191 80 LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADG-Y 158 (238)
Q Consensus 80 ~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g-~ 158 (238)
...|.|.++..+|+|.|+|.+.+.. |.... .+. +..++.+...+....+.+|+.+.|.|.+.| .
T Consensus 82 ~~~L~I~~v~~~D~G~Y~C~a~n~~--~~~~~--------~v~-----~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~ 146 (226)
T 4f80_A 82 KAALRIHNVTASDSGKYLCYFQDGD--FYEKA--------LVE-----LKVAALGSDLHVDVKGYKDGGIHLECRSTGWY 146 (226)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETT--EEEEE--------EEE-----EEEEBCCCCCEEEEEEEETTEEEEEEEEEEEB
T ss_pred eEEEEEeeCchHHCeeEEEEEECCC--cEEEE--------EEE-----EeeccceecccceeeeccCCceeeEEEeccCC
Confidence 3467888899999999997765532 21111 111 111222222223466788999999999988 4
Q ss_pred CCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 159 PEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 159 P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.|.|+|++++..+............++.+.+..+ ..++.+|+|.|+|.|.|.+|... +.+.|.|.++.
T Consensus 147 P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~-l~v~~~d~G~YtC~a~N~~g~~~-~~~~v~v~ep~ 215 (226)
T 4f80_A 147 PQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAAS-VIMRGSSGEGVSCTIRSSLLGLE-KTASISIADPF 215 (226)
T ss_dssp SCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEE-EEECC----CEEEEEEETTTTEE-EEEEECCCTTT
T ss_pred CCCEEEEEECCceEcCCCceEEEECCCCcEEEEEE-EEechhcCcEEEEEEEeCCCCeE-EEEEEEECCCC
Confidence 99999999965444322122223334454443322 22388999999999999999997 59999987654
No 100
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.65 E-value=3.4e-16 Score=132.00 Aligned_cols=163 Identities=17% Similarity=0.185 Sum_probs=99.8
Q ss_pred CCCccEEEeccc---ccccc-----ceE-----EEEEcCCCCCCCCC---ceEEEeCCCcccCCceEEeCCCCcceecce
Q psy18191 61 YPKPICLRFQDL---LPQSK-----QGL-----MYLVGSQASPDYPN---RFSLCNNKTWQKGLPLKKYHPPSLPLFPGV 124 (238)
Q Consensus 61 ~~~~~~~w~~~~---~~~~~-----~g~-----~~l~~~~~~~~~~g---~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~ 124 (238)
.|.+.+.|++++ .+... ..+ ..|.+.++...|+| .|+|.+.+......................
T Consensus 128 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~ 207 (395)
T 1bih_A 128 YPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNS 207 (395)
T ss_dssp ESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSS
T ss_pred CCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccc
Confidence 456789999986 12110 111 13455667777888 888777664332111111000000000000
Q ss_pred ecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEe--cCC-cEEEEEeecCCCCCC
Q psy18191 125 HGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILL--PAG-SLFFLSLVHGKKDTD 201 (238)
Q Consensus 125 ~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~--~~~-~l~~~~vi~~v~~~d 201 (238)
......+|.+ .+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+........... ..+ .|. |..+..+|
T Consensus 208 ~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~----i~~~~~~d 281 (395)
T 1bih_A 208 GYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLL----FKTTLPED 281 (395)
T ss_dssp CCCCCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEE----ESSCCGGG
T ss_pred cccCCcCcee--cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEE----EccCChhh
Confidence 0001234555 35678899999999999999999999999999998865322222111 122 344 66779999
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 202 SGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
+|.|+|.|.|..|...+..+.|.|..+|
T Consensus 282 ~G~Y~C~a~n~~g~~~~~~~~l~V~~~P 309 (395)
T 1bih_A 282 EGVYTCEVDNGVGKPQKHSLKLTVVSAP 309 (395)
T ss_dssp CEEEEEEECCSSSSCEEEEEEEEEEEEE
T ss_pred CEEEEEEEEeCCCCceEEEEEEEEEcCC
Confidence 9999999999999976558888887654
No 101
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.65 E-value=7.4e-16 Score=127.01 Aligned_cols=150 Identities=14% Similarity=0.158 Sum_probs=99.8
Q ss_pred CCCccEEEecccc--ccc-----cce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 61 YPKPICLRFQDLL--PQS-----KQG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 61 ~~~~~~~w~~~~~--~~~-----~~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
.|.+.+.|+++.. ... ..+ ...|.+..+..+|+|.|+|.+.+.. | .....+.+.+.
T Consensus 163 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~--~-----------~~~~~~~l~V~ 229 (331)
T 3u83_A 163 KPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHM--D-----------RFKESLTLNVQ 229 (331)
T ss_dssp BSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETT--E-----------EEEEEEECCEE
T ss_pred cCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCC--C-----------cceeeEEEEEe
Confidence 4567888988532 110 011 1235556667777788887665532 1 11122333355
Q ss_pred cCCEEEeC-CCceEEeCCCcEEEEEEEeeeCCCE-EEEEeCCEEeeccCCccEEEecCCcEEEEEeec-CCCCCCCeEEE
Q psy18191 130 RVPRITEH-PASAVVPRHEPTTLNCKADGYPEPR-IEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVH-GKKDTDSGVYW 206 (238)
Q Consensus 130 ~~P~i~~~-~~~~~~~~G~~~~L~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~-~v~~~d~G~Y~ 206 (238)
.+|.+... +....+.+|+.+.|.|.+.|.|.|. +.|++++..+... ....++.|. |. .+..+|+|.|+
T Consensus 230 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~-----~~~~~~~L~----i~~~v~~~d~G~Y~ 300 (331)
T 3u83_A 230 YEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKG-----VEAQNRTLF----FKGPINYSLAGTYI 300 (331)
T ss_dssp EEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT-----EEEETTEEE----ECSCCCGGGCEEEE
T ss_pred cCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccccc-----ceecCcEEE----EeCCCccccCeEEE
Confidence 67777643 4456678999999999999999998 9999999877532 223456665 45 56999999999
Q ss_pred EEEEeCCCceeEEEEEEEEccCCCCCC
Q psy18191 207 CVARNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
|.|.|..|... ..+.|.|........
T Consensus 301 C~a~N~~G~~~-~~~~l~V~~~~~~~~ 326 (331)
T 3u83_A 301 CEATNPIGTRS-GQVEVNITEAAALEH 326 (331)
T ss_dssp EEEEETTEEEE-EEEEECCBC------
T ss_pred EEEEeccccce-EEEEEEEeccchhhh
Confidence 99999999996 599999988765543
No 102
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.64 E-value=6e-16 Score=118.07 Aligned_cols=147 Identities=14% Similarity=0.106 Sum_probs=93.7
Q ss_pred ccEEEeccccccc--------cceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEE
Q psy18191 64 PICLRFQDLLPQS--------KQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRIT 135 (238)
Q Consensus 64 ~~~~w~~~~~~~~--------~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~ 135 (238)
+.+.|+|++.... ......|.+.++...|+|.|+|.+.+... .........+. ......+|.+.
T Consensus 32 ~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~------~~~~s~~~~l~--V~~~~~~p~i~ 103 (188)
T 1oll_A 32 VEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGEL------WSEPSNLLDLV--VTEMYDTPTLS 103 (188)
T ss_dssp CEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTE------ECCCCCCEEEE--EESCSCCCEEE
T ss_pred CEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCC------CCCCCCceEEE--ecccCCCCeEE
Confidence 5789999886432 11234677888999999999987654211 11111111111 11122367777
Q ss_pred eCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC-
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG- 214 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G- 214 (238)
..+ ...+.+|+.+.|.|.+.+ +.+.+.|+|+|..+... ......++.|.+ ..++.+|+|.|+|.|.|...
T Consensus 104 ~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~---~~~~~~~~~L~I----~~v~~~d~G~Y~C~a~n~~~~ 174 (188)
T 1oll_A 104 VHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQ---RGYGKVQAEFPL----GPVTTAHRGTYRCFGSYNNHA 174 (188)
T ss_dssp EES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEE---EEECSSEEEEEE----EECCGGGCEEEEEECEEETTE
T ss_pred ECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCcccccc---ccCCCceeEEEE----CCCCcCCCcEEEEEEEcCCCc
Confidence 655 456889999999999876 45799999998766531 111122345554 44599999999999998752
Q ss_pred -ceeEEEEEEEEcc
Q psy18191 215 -FARSKNATLDVAG 227 (238)
Q Consensus 215 -~~~s~~~~L~V~~ 227 (238)
+..|..+.|.|.+
T Consensus 175 ~s~~S~~~~l~V~g 188 (188)
T 1oll_A 175 WSFPSEPVKLLVTG 188 (188)
T ss_dssp ECCCCCCEEEEEEC
T ss_pred CCCCCCcEEEEecC
Confidence 3345678888753
No 103
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.64 E-value=2.3e-15 Score=129.21 Aligned_cols=163 Identities=13% Similarity=0.065 Sum_probs=105.4
Q ss_pred CCCccEEEecccccccc--------ceEEEEEcCCCCCCCCCceEEEeCCCc----------------------------
Q psy18191 61 YPKPICLRFQDLLPQSK--------QGLMYLVGSQASPDYPNRFSLCNNKTW---------------------------- 104 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~--------~g~~~l~~~~~~~~~~g~y~~~~~~~~---------------------------- 104 (238)
.|.+.+.|++++..+.. .+...|.+.++..+|+|.|+|.+.+..
T Consensus 75 ~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~ 154 (423)
T 3qs7_E 75 PGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKME 154 (423)
T ss_dssp CSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECS
T ss_pred CCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccccCCcEeccC
Confidence 56788999998753221 123468889999999999998654321
Q ss_pred -----------------------------------------------ccCCceEEeCCCCcceec-ceecCCccCCEEEe
Q psy18191 105 -----------------------------------------------QKGLPLKKYHPPSLPLFP-GVHGDGYRVPRITE 136 (238)
Q Consensus 105 -----------------------------------------------~~G~y~c~~~~~~~~~~~-~~~~~v~~~P~i~~ 136 (238)
+.|.|.|.+.+....... ...+.+..+|.+
T Consensus 155 ~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~-- 232 (423)
T 3qs7_E 155 NQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT-- 232 (423)
T ss_dssp SSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS--
T ss_pred CceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc--
Confidence 134467766655443322 123334444443
Q ss_pred CCCceEEeCCCcEEEEEEEee-eCCCEEEEEeCCEEeeccCCccEEEecCCc---EEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 137 HPASAVVPRHEPTTLNCKADG-YPEPRIEWYKDGSLVSAEIGSHRILLPAGS---LFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g-~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~---l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
.+....+.+|+.+.|.|.+.| .|.|.+.|+++|..+.............+. ....+.|..+..+|+|.|+|.|.|.
T Consensus 233 ~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (423)
T ss_dssp STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence 345678899999999999998 677999999999877542000001111110 0112337788999999999999998
Q ss_pred CCceeEEEEEEEEccCC
Q psy18191 213 LGFARSKNATLDVAGKI 229 (238)
Q Consensus 213 ~G~~~s~~~~L~V~~~~ 229 (238)
. +..+.|.|..++
T Consensus 313 ---~-~~~~~L~V~~~p 325 (423)
T 3qs7_E 313 ---P-SQSALVTIVEKG 325 (423)
T ss_dssp ---E-EEEEEEEEESSC
T ss_pred ---C-CceEEEEEEeCC
Confidence 4 358889887654
No 104
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.64 E-value=7.6e-15 Score=99.78 Aligned_cols=91 Identities=23% Similarity=0.356 Sum_probs=71.4
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeee-CCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGY-PEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
+...+.+..+.+|+++.|.|.+.|. |.|.+.|++++..+... ....+...++...+ .|..+..+|+|.|+|.|.|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~L--~i~~v~~~D~G~Y~C~a~n~ 80 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENS-EKYEITYEDGVAIL--YVKDITKLDDGTYRCKVVND 80 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSS-SSEEEEEETTEEEE--EECSCCGGGCEEEEEEEECS
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCC-CCEEEEEcCCeEEE--EEecCChhhCeEEEEEEECC
Confidence 4455678899999999999999997 99999999999988753 22223234442222 26778999999999999999
Q ss_pred CCceeEEEEEEEEccC
Q psy18191 213 LGFARSKNATLDVAGK 228 (238)
Q Consensus 213 ~G~~~s~~~~L~V~~~ 228 (238)
.|...+ .+.|.|.+.
T Consensus 81 ~g~~~~-~~~l~V~~~ 95 (97)
T 2bk8_A 81 YGEDSS-YAELFVKGV 95 (97)
T ss_dssp SCEEEE-EEEEEETTT
T ss_pred CCeEeE-EEEEEEEec
Confidence 999974 999999754
No 105
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.64 E-value=3.2e-15 Score=120.94 Aligned_cols=157 Identities=13% Similarity=0.020 Sum_probs=95.4
Q ss_pred ccEEEeccc-cccccce-E-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEe
Q psy18191 64 PICLRFQDL-LPQSKQG-L-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITE 136 (238)
Q Consensus 64 ~~~~w~~~~-~~~~~~g-~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~ 136 (238)
+.+.|++++ ....... . ..|.+.++...|+|.|+|.+.+.. |... .....+. +......+|.+..
T Consensus 120 ~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~--~~~~-----s~~~~l~-V~~~~~~~p~i~~ 191 (292)
T 4dkd_C 120 AGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGG--RKVM-----SISIRLK-VQKVIPGPPALTL 191 (292)
T ss_dssp SSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTT--SCEE-----CCCEEEE-EECCCCSSCEEEE
T ss_pred eeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCC--Ccee-----EEEEEEE-EeCCCCCCCeEEc
Confidence 678888863 3332221 1 125666777778888887666421 1100 0011111 1111223889988
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCC-CEEEEEeCCEEeeccCCccEEEecCCc--EEEEEeecCCCCCCCeEEEEEEEeCC
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPE-PRIEWYKDGSLVSAEIGSHRILLPAGS--LFFLSLVHGKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~--l~~~~vi~~v~~~d~G~Y~C~a~N~~ 213 (238)
.+....+.+|+.+.|.|.+.|.|+ +.+.|++++..+... .......+. ....+.|..+..+|+|.|+|.|.|..
T Consensus 192 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~---~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 268 (292)
T 4dkd_C 192 VPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIP---QQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQ 268 (292)
T ss_dssp ESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCC---BEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSS
T ss_pred cCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccC---ccceeccceeeeEEEEEECccChhcCeEEEEEEecCC
Confidence 888777789999999999998775 568889988766532 111111221 11123377889999999999999999
Q ss_pred CceeEEEEEEEEccCCCCC
Q psy18191 214 GFARSKNATLDVAGKISTA 232 (238)
Q Consensus 214 G~~~s~~~~L~V~~~~~~~ 232 (238)
|... ..+.|.|.......
T Consensus 269 g~~~-~~~~l~V~~~~~~~ 286 (292)
T 4dkd_C 269 GKHS-TSMFFRVVESAGNS 286 (292)
T ss_dssp CEEE-EEEEECC-------
T ss_pred CCce-eEEEEEEeeCCCcc
Confidence 9986 59999998766543
No 106
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.64 E-value=1.4e-15 Score=117.23 Aligned_cols=85 Identities=11% Similarity=0.121 Sum_probs=61.2
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecC-CcEEEEEeecCCCCCCCeEEEEEEEeCCCc
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPA-GSLFFLSLVHGKKDTDSGVYWCVARNELGF 215 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~-~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~ 215 (238)
.+....+..|+.+.|.|.+.|.|.|.++|++++..+... ......+ ......+.|..+..+|.|.|+|.|.|..|.
T Consensus 124 ~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~---~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~ 200 (218)
T 4frw_A 124 PGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS---RSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLL 200 (218)
T ss_dssp ECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE---EEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCS
T ss_pred eeeeeeeeeccccceeeeccCCcCceEEEEECCcccccC---ceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCC
Confidence 345566778999999999999999999999999877642 1121111 111222346777999999999999999998
Q ss_pred eeEEEEEEEE
Q psy18191 216 ARSKNATLDV 225 (238)
Q Consensus 216 ~~s~~~~L~V 225 (238)
.. ..+.|.|
T Consensus 201 ~~-~~~t~~v 209 (218)
T 4frw_A 201 QD-QRITHIL 209 (218)
T ss_dssp SC-EEEEEEC
T ss_pred eE-EEEEEEE
Confidence 75 3555554
No 107
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.64 E-value=8e-16 Score=121.77 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=79.6
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc---CCEEEe-CCCceEEeCCCcEEEEEEEee
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR---VPRITE-HPASAVVPRHEPTTLNCKADG 157 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~---~P~i~~-~~~~~~~~~G~~~~L~C~~~g 157 (238)
.|.+.++..+|+|.|+|.+.+......+-. ....+.+.+.. +|.+.. .+....+.+|+.+.|.|.+.|
T Consensus 91 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~--------~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g 162 (250)
T 2fbo_J 91 TLRLTHVHPQDGGRYWCQVAQWSIRTEFGL--------DAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTD 162 (250)
T ss_dssp CEEECSCCGGGCEEEEEEEECTTCCSGGGE--------EEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEES
T ss_pred eEEEeeCChhhCeEEEEEeccCccCCcccc--------cceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecC
Confidence 567778888888888876665322111000 00011111222 344433 345577788999999999999
Q ss_pred eCCCEEEEEeCCEEeeccCCc---------------------cEEE-ecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCc
Q psy18191 158 YPEPRIEWYKDGSLVSAEIGS---------------------HRIL-LPAGSLFFLSLVHGKKDTDSGVYWCVARNELGF 215 (238)
Q Consensus 158 ~P~p~i~W~~~g~~l~~~~~~---------------------~~~~-~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~ 215 (238)
.|.|.+.|++++..+...... .... ...+.|. |..+..+|+|.|+|.|.|.+|.
T Consensus 163 ~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 163 CANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLV----IRAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp CTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEE----ECSCCGGGCEEEEEEEESSSSG
T ss_pred CCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEE----EecCCcccCEEEEEEecCCccc
Confidence 999999999998876532100 1111 1224444 6677999999999999996654
Q ss_pred eeE--EEEEEE
Q psy18191 216 ARS--KNATLD 224 (238)
Q Consensus 216 ~~s--~~~~L~ 224 (238)
..+ ..+.|.
T Consensus 239 ~g~~~~~~~l~ 249 (250)
T 2fbo_J 239 LDADRSSTILK 249 (250)
T ss_dssp GGEEEEEEEEE
T ss_pred cCccceeEEEe
Confidence 422 344444
No 108
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.64 E-value=4.1e-15 Score=115.73 Aligned_cols=134 Identities=16% Similarity=0.246 Sum_probs=79.9
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEE-eeeCC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKA-DGYPE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~-~g~P~ 160 (238)
.|.+.++..+|+|.|+|...+... + .....+. ......+|.+...+ ...+.+|+.+.|.|.+ .|.|.
T Consensus 73 sL~I~~v~~~D~G~Y~C~~~~~~~-~--------~~~~~l~--V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~ 140 (222)
T 4i0k_A 73 SLRLQRVRVTDEGSYTCFVSIQDF-D--------SAAVSLQ--VAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPE 140 (222)
T ss_dssp CEEECSCCGGGCSCEEEEEEECCC-C--------CCCCCCC--CCBCCCCCEEECCC------CCSEEEEEEEEEEEBSC
T ss_pred EEEECCcccccCEEEEEEEEeCCC-c--------eEEEEEE--EEcCCCCCcEEeCC-CceecCCceEEEEEecccccCC
Confidence 366677777777777766543210 0 0111111 01112346776554 3467889999999999 89999
Q ss_pred CEEEEEe-CCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 161 PRIEWYK-DGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 161 p~i~W~~-~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.+.|++ ++..+............++...++ .|..+..+|.|.|+|.|.|..|... ..+.|.|.++|
T Consensus 141 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p 208 (222)
T 4i0k_A 141 AEVFWKDGQGVPLTGNVTTSQMANERGLFDVH-SVLRVVLGANGTYSCLVRNPVLQQD-AHGSVTITGQP 208 (222)
T ss_dssp CEEEEECTTSCBCCSEEEEEEEECTTSCEEEE-EEEEEECCTTCEEEEEEEETTTTEE-EEEEEECCC--
T ss_pred CeEEEEcCCCccCCCCcceeEEcCCCCeEEEE-EEEEEEeCCCCEEEEEEECCCCCCc-eEEEEEEeCCc
Confidence 9999999 555443210111112234442222 1344489999999999999999996 59999998765
No 109
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.64 E-value=3.2e-15 Score=134.21 Aligned_cols=153 Identities=16% Similarity=0.179 Sum_probs=104.8
Q ss_pred CCCccEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCc
Q psy18191 61 YPKPICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPAS 140 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~ 140 (238)
.|.+.+.|++++..+.... .|.+.++...|+|.|+|.+.+...... . .. .+.........+|.+.. +..
T Consensus 408 ~p~~~i~W~~~g~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~--~----s~--~~~v~v~~~~~~p~i~~-~~~ 476 (642)
T 1e07_A 408 NPPAQYSWLIDGNIQQHTQ--ELFISNITEKNSGLYTCQANNSASGHS--R----TT--VKTITVSAELPKPSISS-NNS 476 (642)
T ss_pred cCCCeEEEEECCEEcCCCc--eEEEccCChhhCeEEEEEEEcCCCCCc--c----cc--eEEEEEeccCCCceEec-CCc
Confidence 4577899999988665432 467788899999999988877532111 0 01 11111111224566654 345
Q ss_pred eEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEE
Q psy18191 141 AVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKN 220 (238)
Q Consensus 141 ~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~ 220 (238)
..+.+|+.+.|.|.+.+ |.|.+.|+++|..+... ....+...++.|.+ ..+..+|+|.|+|.|.|..|...+..
T Consensus 477 ~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~-~~~~~~~~~~~L~i----~~v~~~d~G~Y~C~a~n~~g~~~s~~ 550 (642)
T 1e07_A 477 KPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVS-PRLQLSNGNRTLTL----FNVTRNDARAYVCGIQNSVSANRSDP 550 (642)
T ss_pred eeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCC-CcEEEcCCCcEEEE----eecChhcCceEEEEeEcCCCCccCCC
Confidence 77889999999999985 88999999999988743 11122222445554 45599999999999999999876557
Q ss_pred EEEEEccCCC
Q psy18191 221 ATLDVAGKIS 230 (238)
Q Consensus 221 ~~L~V~~~~~ 230 (238)
+.|.|...|.
T Consensus 551 ~~l~V~~~p~ 560 (642)
T 1e07_A 551 VTLDVLYGPD 560 (642)
T ss_pred EEEEEEeCCC
Confidence 8899876554
No 110
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.63 E-value=2.7e-14 Score=125.22 Aligned_cols=156 Identities=17% Similarity=0.133 Sum_probs=102.6
Q ss_pred CccEEEec-cccccccce-E-----EEEEcCCCCCCCCC-ceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEE
Q psy18191 63 KPICLRFQ-DLLPQSKQG-L-----MYLVGSQASPDYPN-RFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRI 134 (238)
Q Consensus 63 ~~~~~w~~-~~~~~~~~g-~-----~~l~~~~~~~~~~g-~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i 134 (238)
.+.+.||+ ++..+.... + ..|.+.++..+|+| .|+|.+.+.. |... .....+. +......+|.+
T Consensus 143 ~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~--~~~~-----s~~~~l~-V~~~~~~~p~i 214 (524)
T 2ec8_A 143 VTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEG--KSVL-----SEKFILK-VRPAFKAVPVV 214 (524)
T ss_dssp CSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC------CCC-----CCCEECC-EECCCCSCCEE
T ss_pred cceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECC--ceEE-----EEEEEEE-EEeCCCCCCcE
Confidence 47899988 666554322 1 14566778888888 8887766531 1110 0011111 11112478999
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeCCCE-EEEEeCCEEe--eccCCccEEEec-C--CcEEEEEeecCCCCCCCeEEEEE
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYPEPR-IEWYKDGSLV--SAEIGSHRILLP-A--GSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P~p~-i~W~~~g~~l--~~~~~~~~~~~~-~--~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
...+....+.+|+.+.|.|.+.|.|.|. +.|++++..+ ... ...... + ........|..+..+|+|.|+|.
T Consensus 215 ~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 291 (524)
T 2ec8_A 215 SVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEK---YNSWHHGDFNYERQATLTISSARVNDSGVFMCY 291 (524)
T ss_dssp ECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEE---EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEE
T ss_pred EecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccc---cccccccCCccceEEEEEECCCCHHHCEEEEEE
Confidence 8888888999999999999999999987 9999999873 221 111111 1 01112223777899999999999
Q ss_pred EEeCCCceeEEEEEEEEccCCC
Q psy18191 209 ARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
|.|..|...+ .+.|.|..++.
T Consensus 292 a~n~~g~~~~-~~~l~V~~~p~ 312 (524)
T 2ec8_A 292 ANNTFGSANV-TTTLEVVDKGF 312 (524)
T ss_dssp EECSSCEEEE-EEEEEEESSCE
T ss_pred EEecCCceEE-EEEEEEeccCc
Confidence 9999999974 99999976643
No 111
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.63 E-value=5.3e-15 Score=119.58 Aligned_cols=151 Identities=14% Similarity=0.122 Sum_probs=103.1
Q ss_pred cEEEec-cccccccce---------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEE
Q psy18191 65 ICLRFQ-DLLPQSKQG---------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRI 134 (238)
Q Consensus 65 ~~~w~~-~~~~~~~~g---------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i 134 (238)
.+.|++ ++..+.... ...|.+.++..+|+|.|+|.+.+.. |... ...+.+.+..+|.+
T Consensus 34 ~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~--g~~~----------~~~~~l~v~~~~~~ 101 (291)
T 2wim_A 34 SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAK--GQTQ----------EATVVLEIYQKLTF 101 (291)
T ss_dssp EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSS--SCEE----------EEEEEEEEECCCBC
T ss_pred ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEeccc--CceE----------EEEEEEEecCCcce
Confidence 689999 555443211 2468888999999999998776632 2111 11112224456777
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+............++.|. |..+..+|+|.|+|.|.|..+
T Consensus 102 ~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~~~n~~~ 177 (291)
T 2wim_A 102 REVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ----ILNINKSDEGIYRCEGRVEAR 177 (291)
T ss_dssp CSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEE----ETTCCGGGCEEEEEEEEETTT
T ss_pred EeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEE----EEecchhhCEEEEEEEEECCC
Confidence 6667778899999999999999999999999999988765333444445566665 566699999999999999985
Q ss_pred c-eeEEEEEEEEccCCCC
Q psy18191 215 F-ARSKNATLDVAGKIST 231 (238)
Q Consensus 215 ~-~~s~~~~L~V~~~~~~ 231 (238)
. ..+..+.|.|..++..
T Consensus 178 ~~~~~~~~~~~v~~~p~~ 195 (291)
T 2wim_A 178 GEIDFRDIIVIVNVPPAI 195 (291)
T ss_dssp TEEEEEEEEEEEEBCCCC
T ss_pred CeeEEeeEEEEeccCCcc
Confidence 4 3334667777666543
No 112
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.63 E-value=1.9e-15 Score=117.53 Aligned_cols=132 Identities=14% Similarity=0.154 Sum_probs=81.8
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPE 160 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~ 160 (238)
..|.+.++..+|+|.|+|.+.+ .|..... +.+.+..+|..........+.+|+.+.|.|.+.|.|.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~---~~~~~~~-----------~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~ 145 (222)
T 3sbw_C 80 AALQITDVKLQDAGVYRCMISY---GGADYKR-----------ITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPK 145 (222)
T ss_dssp EEEEESSCCGGGCEEEEEEEES---SSEEEEE-----------EEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSC
T ss_pred EEEEEcCcccccCeEEEEEEEe---CCCceeE-----------EEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCC
Confidence 4688889999999999977665 1211111 1111223332211111125678999999999999999
Q ss_pred CEEEEEeC-CEEeeccCCccEE-EecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 161 PRIEWYKD-GSLVSAEIGSHRI-LLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 161 p~i~W~~~-g~~l~~~~~~~~~-~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.+.|+++ +..+... ..... ...++.+.+... -.+...|.|.|+|.|.|..|... ..+.|.|.+.+
T Consensus 146 p~i~W~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~-l~v~~~d~g~Y~C~a~n~~g~~~-~~~~l~v~~~p 213 (222)
T 3sbw_C 146 AEVIWTSSDHQVLSGK-TTTTNSKREEKLFNVTST-LRINTTTNEIFYCTFRRLDPEEN-HTAELVIPELP 213 (222)
T ss_dssp CEEEEEETTCCEECCE-EEEEECC----CEEEEEE-EEEECCTTCEEEEEEEETTTTEE-EEEEEECCCC-
T ss_pred CeEEEEECCCceecCc-cceEEEcCCCCCEEEEEE-EEEeccCCcEEEEEEEeCcccee-eEEEEEecCCc
Confidence 99999998 6555421 11111 122343333321 12267899999999999999996 59999987654
No 113
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.63 E-value=1.3e-15 Score=115.14 Aligned_cols=134 Identities=11% Similarity=0.016 Sum_probs=83.3
Q ss_pred CCCccEEEeccccccc----------cce-E-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce
Q psy18191 61 YPKPICLRFQDLLPQS----------KQG-L-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV 124 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~----------~~g-~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~ 124 (238)
.+.+.+.|++++..+. ..+ + ..|.|.++..+|+|.|+|.+.+.. |..... ....+. +
T Consensus 25 ~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~--g~~~~~----~~~~l~-V 97 (176)
T 1hng_A 25 DDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN--GTRILN----KALDLR-I 97 (176)
T ss_dssp TTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT--CCEEEE----EEEEEE-E
T ss_pred cccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC--CCEEEE----EEEEEE-E
Confidence 3466899999874221 011 1 136777888888888887665532 211000 000111 1
Q ss_pred ecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeE
Q psy18191 125 HGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 125 ~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~ 204 (238)
.. ...+|.+. ..+..+.|.|.+.|.|.|.+.|+++|..+... ..+.+..+ ..+|+|.
T Consensus 98 ~~-~~~~p~i~--------~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~----------~~~~i~~~----~~~d~G~ 154 (176)
T 1hng_A 98 LE-MVSKPMIY--------WECSNATLTCEVLEGTDVELKLYQGKEHLRSL----------RQKTMSYQ----WTNLRAP 154 (176)
T ss_dssp EC-CCCCCEEE--------EETTTTEEEEECSSCSSCEEEEEETTEEEEEE----------SSSEEEEE----CSCCSSC
T ss_pred eC-CCCCCEEE--------ecCCcEEEEEEecCCCCcEEEEEECCEECCCC----------CcEEEEEE----EccCCeE
Confidence 10 11223333 23456999999999999999999999888642 11333344 8999999
Q ss_pred EEEEEEeCCCceeEEEEEEEE
Q psy18191 205 YWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V 225 (238)
|+|.|.|.+|...+ .+.|.+
T Consensus 155 Y~C~a~N~~g~~~~-~~~l~~ 174 (176)
T 1hng_A 155 FKCKAVNRVSQESE-MEVVNC 174 (176)
T ss_dssp EEEEEEETTEEEEE-EECCCC
T ss_pred EEEEEEecCCCcee-cccccC
Confidence 99999999999964 666654
No 114
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.63 E-value=4e-15 Score=125.68 Aligned_cols=159 Identities=23% Similarity=0.373 Sum_probs=99.9
Q ss_pred CCCccEEEecccc-ccccce-E-----EEEEcCCCCCCC-CCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 61 YPKPICLRFQDLL-PQSKQG-L-----MYLVGSQASPDY-PNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 61 ~~~~~~~w~~~~~-~~~~~g-~-----~~l~~~~~~~~~-~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.+.|++++. ...... . ..|.+.++...| +|.|+|.+.+... ..........+ .+.........+|
T Consensus 144 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~--~~~~~~~~~~l-~v~~~~~~~~~~p 220 (404)
T 3p3y_A 144 LPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFT--HTIQQKNPFTL-KVLTTRGVAERTP 220 (404)
T ss_dssp SSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTT--CCEEECCCBCE-EEECCSCCCCCCC
T ss_pred CCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccc--cceeccCceeE-EEeccCCccccCC
Confidence 4567888998764 322211 1 135556777777 4788876655322 11111100000 1100001122344
Q ss_pred EEEeCC---CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 133 RITEHP---ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 133 ~i~~~~---~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|+++|..+... .......++.|. |..+..+|+|.|+|.|
T Consensus 221 ~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~--~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a 294 (404)
T 3p3y_A 221 SFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALR----ITNVSEEDSGEYFCLA 294 (404)
T ss_dssp CBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTT--TEEEEGGGTEEE----ESSCCGGGCEEEEEEE
T ss_pred ccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCC--cccccccCceEE----EccCCHhHCEEEEEEE
Confidence 443322 2466889999999999999999999999999887642 233334455555 5666999999999999
Q ss_pred EeCCCceeEEEEEEEEccCC
Q psy18191 210 RNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|..|... ..+.|.|..++
T Consensus 295 ~n~~g~~~-~~~~l~V~~~p 313 (404)
T 3p3y_A 295 SNKMGSIR-HTISVRVKAAP 313 (404)
T ss_dssp ECSSCEEE-EEEEEEEEEEE
T ss_pred EeCCCcEE-EEEEEEEeCCC
Confidence 99999986 58999987654
No 115
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=104.21 Aligned_cols=93 Identities=16% Similarity=0.157 Sum_probs=72.9
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.|...+.++.+.+|+++.|.|.+ .|.|.+.|+|+|..+..+ .+.....++.... +.|..+..+|+|.|+|.|
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~--~r~~i~~~~~~~~-L~I~~v~~~D~G~Y~C~a 80 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQES--DRLKVVQKGRIHK-LVIANALTEDEGDYVFAP 80 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCC--SSEEEEECSSEEE-EEESSCCGGGCSEEEEEE
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCC--CcEEEEEeCCEEE-EEECCCChhhCEEEEEEE
Confidence 46788888889999999999999999 899999999999998753 2322333443322 237888999999999999
Q ss_pred EeCCCceeEEEEEEEEccCCC
Q psy18191 210 RNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~~~~ 230 (238)
.|. ... ..+.|.|..+|.
T Consensus 81 ~N~--~~~-~~a~L~V~~~P~ 98 (100)
T 2yuz_A 81 DAY--NVT-LPAKVHVISGPS 98 (100)
T ss_dssp SSS--CCC-EEEEEEEECCSC
T ss_pred cCC--Cee-EEEEEEEeCCCC
Confidence 998 443 488999988765
No 116
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.63 E-value=3.6e-15 Score=114.54 Aligned_cols=148 Identities=16% Similarity=0.117 Sum_probs=90.3
Q ss_pred ccEEEec-cccccc--------cc----eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc
Q psy18191 64 PICLRFQ-DLLPQS--------KQ----GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR 130 (238)
Q Consensus 64 ~~~~w~~-~~~~~~--------~~----g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~ 130 (238)
+.+.|++ +..... .. +...|.+.++..+|+|.|+|.+.+... .... ...+. ......
T Consensus 37 ~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~--~~~~------~~~l~--V~~~~~ 106 (202)
T 3bp6_B 37 IRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAA--WDYK------YLTVK--VKASYM 106 (202)
T ss_dssp EEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTE--EEEE------EEEEE--EEBCCC
T ss_pred eEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCC--cceE------EEEEE--ecCCCC
Confidence 6799999 332211 11 335788889999999999987655322 1000 11111 000112
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
.|.+.. ..+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ......++.+.++. |..+..+|.|.|+|.|.
T Consensus 107 ~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~----~~~~~~~~~~~~~~-i~~v~~~d~G~Y~C~a~ 177 (202)
T 3bp6_B 107 RIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT----SHIRTPEGLYQVTS-VLRLKPQPSRNFSCMFW 177 (202)
T ss_dssp CEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE----EEEECTTSCEEEEE-EEEECCCTTCCEEEEEE
T ss_pred cccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCccC----ceeeCCCCCEEEEE-EEEEEcCCCCEEEEEEE
Confidence 233321 2446799999999999999999999998865532 12223344443332 33448899999999999
Q ss_pred eCCCceeEEEEEEEEccCCCC
Q psy18191 211 NELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 211 N~~G~~~s~~~~L~V~~~~~~ 231 (238)
|..|... ..+.|.|.++..+
T Consensus 178 N~~g~~~-~~~~l~v~~~~~p 197 (202)
T 3bp6_B 178 NAHMKEL-TSAIIDPLSRMEP 197 (202)
T ss_dssp ETTTTEE-EEEEECC------
T ss_pred cCCcccc-cEEEEEecCcCCC
Confidence 9999996 5888888765443
No 117
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.62 E-value=9.4e-16 Score=106.37 Aligned_cols=94 Identities=24% Similarity=0.412 Sum_probs=74.7
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..+|.|...|.++.+.+|+++.|.|.+.|.|.|.+.|+++|..+... ....+....+... +.|..+..+|+|.|+|.
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~-~~~~~~~~~~~~~--L~I~~v~~~D~G~Y~C~ 88 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTS-ARHQVTTTKYKST--FEISSVQASDEGNYSVV 88 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTC-SSEEEEECSSEEE--EEECCCCSSCCSEEEEC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCC-CCEEEEECCCEEE--EEECcCCchhCEEEEEE
Confidence 46788999999999999999999999999999999999999887642 2222222222222 23677799999999999
Q ss_pred EEeCCCceeEEEEEEEEc
Q psy18191 209 ARNELGFARSKNATLDVA 226 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~ 226 (238)
|.|..|... ..+.|.|.
T Consensus 89 a~N~~G~~~-~~~~l~V~ 105 (106)
T 1nct_A 89 VENSEGKQE-AEFTLTIQ 105 (106)
T ss_dssp CBCSSCBCC-EEEEEEEC
T ss_pred EEeCCCeEE-EEEEEEEE
Confidence 999999986 59999885
No 118
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.62 E-value=2.7e-15 Score=119.36 Aligned_cols=143 Identities=14% Similarity=0.149 Sum_probs=95.0
Q ss_pred CCccEEEeccccccccce-EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCc
Q psy18191 62 PKPICLRFQDLLPQSKQG-LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPAS 140 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~g-~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~ 140 (238)
+.+.+.|++++..+.... ...|.+..+...|+|.|+|.+.+... ..... ..+. ......+|.+...+ .
T Consensus 111 p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~------~~~~~--~~l~--V~~~~~~p~~~~~~-~ 179 (262)
T 3rjd_A 111 LVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHR------YTSAG--ISVT--VKELFPAPVLNASV-T 179 (262)
T ss_dssp CCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEESSSE------EEEEC--EEEE--EECSSCCCEEEESS-C
T ss_pred CCceEEEEECCccccccCCCCeEEEEECChhhCEEEEEEEeCCCC------ccccc--eEEE--eccCCCCCeEeecC-c
Confidence 456899999887654432 23567788888999999987766431 10000 0111 11112466776655 5
Q ss_pred eEEeCCCcEEEEEEEeeeCC-CE----EEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCc
Q psy18191 141 AVVPRHEPTTLNCKADGYPE-PR----IEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGF 215 (238)
Q Consensus 141 ~~~~~G~~~~L~C~~~g~P~-p~----i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~ 215 (238)
..+.+|+.+.|.|.+.|.|. |. +.|++++..+... .....|. |..+..+|+|.|+|.|.|..|.
T Consensus 180 ~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~-------~~~~~L~----i~~v~~~d~G~Y~C~a~n~~G~ 248 (262)
T 3rjd_A 180 SPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR-------NTSSEYQ----ILTARREDSGLYWCEAATEDGN 248 (262)
T ss_dssp SSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE-------ESCCEEE----ESSCCGGGCEEEEEEEEETTSS
T ss_pred eeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc-------CCCceEE----EEEechhhCeEEEEEEEcccCc
Confidence 66889999999999999886 54 7889999877632 1234444 5667999999999999999997
Q ss_pred ee--EEEEEEEEc
Q psy18191 216 AR--SKNATLDVA 226 (238)
Q Consensus 216 ~~--s~~~~L~V~ 226 (238)
.. +..+.|.|+
T Consensus 249 ~~~~s~~~~l~V~ 261 (262)
T 3rjd_A 249 VLKRSPELELQVL 261 (262)
T ss_dssp CEEECCCEEECEE
T ss_pred eEEecCCeEEEEe
Confidence 53 234555554
No 119
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.62 E-value=5.2e-16 Score=124.45 Aligned_cols=139 Identities=24% Similarity=0.325 Sum_probs=92.7
Q ss_pred CCccEEEeccccccccce-EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeC--C
Q psy18191 62 PKPICLRFQDLLPQSKQG-LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEH--P 138 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~g-~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~--~ 138 (238)
+.+.+.| ++.++...+ ...|.+.....+|+|.|+|.+.+.. .|..... ...+.+.+..+|.+... |
T Consensus 124 p~~~i~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~-~g~~~~~--------s~~~~l~V~~~p~~~~~~~p 192 (265)
T 2oz4_A 124 PRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEV-AGQLIHK--------NQTRELRVLYGPRLDERDCP 192 (265)
T ss_dssp TTSEEEE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEEC-SSSEEEE--------EEEEEEEEEEEEECCGGGSC
T ss_pred CCCEEEE--CCEEccCCCCcEEEEEccccccCCceEEEEEEcCC-CCCcccc--------cccEEEEEEeCCccccccCC
Confidence 5677888 555543332 2344455666677777887664321 1211110 01122224566666443 4
Q ss_pred CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeE
Q psy18191 139 ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARS 218 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s 218 (238)
.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+. ..+.+. . ++.+|+|.|+|.|.|..|...
T Consensus 193 ~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~----------~~g~~~--~----v~~~d~G~Y~C~a~N~~G~~~- 255 (265)
T 2oz4_A 193 GNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPL----------PIGESV--T----VTRDLEGTYLCRARSTQGEVT- 255 (265)
T ss_dssp SEEEEETTCEECCCCCCEEESCCEEEEEETTTEEC----------CTTSCE--E----CCGGGCEEEEEEEEETTEEEE-
T ss_pred CccEEcCCCeEEEEeECccCCCCeEEEEECCcccC----------CCCcEE--E----eehhhCeEEEEEEECCCCcEE-
Confidence 56788999999999999999999999999987322 234432 2 388999999999999999996
Q ss_pred EEEEEEEccC
Q psy18191 219 KNATLDVAGK 228 (238)
Q Consensus 219 ~~~~L~V~~~ 228 (238)
..+.|.|..+
T Consensus 256 ~~~~l~V~~p 265 (265)
T 2oz4_A 256 REVTVNVLSP 265 (265)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEecC
Confidence 5999999753
No 120
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.62 E-value=7.6e-16 Score=104.54 Aligned_cols=88 Identities=20% Similarity=0.321 Sum_probs=72.0
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..+|.|...+....+.+|+.+.|.|.+.|.| |.+.|+++|..+... .++...++.|. |..+..+|+|.|+|.
T Consensus 7 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~---~~~~~~~~~L~----i~~~~~~D~G~Y~C~ 78 (95)
T 2ckn_A 7 AQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVES---NRTRITGEEVE----VRDSIPADSGLYACV 78 (95)
T ss_dssp SCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCC---SSEEECSSEEE----ESSCCGGGSEEEEEE
T ss_pred CCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCC---CCEEEeCCEEE----ECCCChHHCEEEEEE
Confidence 3567777778889999999999999999998 899999999888642 23334456665 566699999999999
Q ss_pred EEeCCCceeEEEEEEEE
Q psy18191 209 ARNELGFARSKNATLDV 225 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V 225 (238)
|.|..|... ..+.|.|
T Consensus 79 a~n~~g~~~-~~~~l~V 94 (95)
T 2ckn_A 79 TSSPSGSDT-TYFSVNV 94 (95)
T ss_dssp EEETTEEEE-EEEEEEE
T ss_pred eccCCCcEE-EEEEEEE
Confidence 999999986 5888877
No 121
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.62 E-value=1.8e-15 Score=127.19 Aligned_cols=156 Identities=19% Similarity=0.224 Sum_probs=102.4
Q ss_pred CCCccEEEeccccccc--cce-------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce-ecCCcc
Q psy18191 61 YPKPICLRFQDLLPQS--KQG-------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV-HGDGYR 130 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~--~~g-------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~-~~~v~~ 130 (238)
.+.+.+.|++++.+.. ..+ ...|.+.++...|+|.|+|.+.+....+ ...... ....+... ......
T Consensus 129 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~--~~~~~s-~~~~l~v~~~~~~~~ 205 (382)
T 1cs6_A 129 YPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFI--TKSVFS-KFSQLSLAAEDARQY 205 (382)
T ss_dssp ESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTE--EEEEEC-CCEEEEEESCCCCCE
T ss_pred CCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccc--cceeEc-cceeeccchhhcccC
Confidence 3567899999886432 111 1246677888888899987766532111 111100 00111100 011234
Q ss_pred CCEEEeC-CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 131 VPRITEH-PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 131 ~P~i~~~-~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ......+.|. |..+..+|+|.|+|.|
T Consensus 206 ~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~-----~~~~~~~~L~----i~~~~~~d~G~Y~C~a 276 (382)
T 1cs6_A 206 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS-----KWLSSEPLLH----IQNVDFEDEGTYECEA 276 (382)
T ss_dssp EEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSC-----CCSBSSSEEE----ECSCCGGGCEEEEEEE
T ss_pred CCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCccccc-----EEecCCcEEE----EccCChhhCEEEEEEE
Confidence 6776654 5678899999999999999999999999998876542 1112234454 5666999999999999
Q ss_pred EeCCCceeEEEEEEEEccCC
Q psy18191 210 RNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|..|... ..+.|.|..+|
T Consensus 277 ~n~~g~~~-~~~~l~V~~~p 295 (382)
T 1cs6_A 277 ENIKGRDT-YQGRIIIHAQP 295 (382)
T ss_dssp EETTEEEE-EEEEEEEEEEE
T ss_pred EcCCCeEE-EEEEEEEecCC
Confidence 99999986 58889887654
No 122
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.62 E-value=5.1e-15 Score=122.13 Aligned_cols=96 Identities=18% Similarity=0.244 Sum_probs=62.5
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC--EEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCe
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEP--RIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSG 203 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G 203 (238)
+..+|.+...+.. +.+|+.+.|.|.+.|.|+| .+.|+++|..+............++.+.+ .+.|..+..+|+|
T Consensus 219 v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G 296 (327)
T 2wng_A 219 IRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDV 296 (327)
T ss_dssp BCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CC
T ss_pred cCCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCC
Confidence 5578888765443 6799999999999996544 79999999988753222223334454332 2235666889999
Q ss_pred EEEEEEEeCCCceeEEEEEEEE
Q psy18191 204 VYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
.|+|.|.|..|...++.+.+.+
T Consensus 297 ~Y~C~a~N~~~~~~s~~~~~~~ 318 (327)
T 2wng_A 297 KLTCQVEHDGQPAVSKSHDLKV 318 (327)
T ss_dssp EEEEEEEETTCCCEEEEEECC-
T ss_pred EEEEEEEeCCCCCchhheEEEe
Confidence 9999999999988665655544
No 123
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.62 E-value=2.8e-15 Score=100.85 Aligned_cols=86 Identities=23% Similarity=0.384 Sum_probs=71.3
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.++.+...|....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ..+.|. |..+..+|+|.|+|.|
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~--------~~~~L~----i~~v~~~d~G~Y~C~a 69 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE--------TKKLYM----VPYVDLEHQGTYWCHV 69 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC--------CSSEEE----ESSCCGGGCEEEEEEE
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC--------CCCeEE----ECCCCHHhCEEEEEEE
Confidence 3577888888899999999999999999999999999999887643 123444 5667999999999999
Q ss_pred EeCCCceeEEEEEEEEcc
Q psy18191 210 RNELGFARSKNATLDVAG 227 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~ 227 (238)
.|..|...+..+.|.|.+
T Consensus 70 ~n~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 70 YNDRDSQDSKKVEIIIDE 87 (91)
T ss_dssp ECSSCEEECCCEEEEEC-
T ss_pred EcCCCCEEeeeEEEEEeh
Confidence 999998766678888854
No 124
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.62 E-value=2.7e-15 Score=106.88 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=68.6
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecC----C-cEEEEEeecCCCCCCCeE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPA----G-SLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~----~-~l~~~~vi~~v~~~d~G~ 204 (238)
+||.| .... ...+..+.|.|.+.|.|.|.|+|+|||..|..+ ......... + .....+.|..+...|+|.
T Consensus 3 ~pP~I-~l~~---~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 77 (126)
T 1he7_A 3 MPASV-QLHT---AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNET-SFIFTEFLEPAANETVRHGCLRLNQPTHVNNGN 77 (126)
T ss_dssp CCCCC-CCCC---CCCCCEEEEEEEECCSSCCEEEEEETTEECCCC-SSEEEEEECCCSSCCCEEEEEEEESCCGGGCEE
T ss_pred CCCEE-EccC---CccCccEEEEEEEeeeCCCeEEEEECCEECCCC-CceeEEEeeccccccccceEEEECcCCCCCCEE
Confidence 57776 2222 235678999999999999999999999999753 111111111 1 111222366779999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEccCCCC
Q psy18191 205 YWCVARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
|+|.|.|.+|... .++.|.|...|..
T Consensus 78 YtC~A~N~~G~~~-~t~~l~v~~~P~~ 103 (126)
T 1he7_A 78 YTLLAANPFGQAS-ASIMAAFMDNPFE 103 (126)
T ss_dssp EEEEEEETTEEEE-EEEEECCCSCTTS
T ss_pred EEEEEEECCCeEE-EEEEEEEEcCCCC
Confidence 9999999999996 5999998876654
No 125
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.62 E-value=3.3e-16 Score=134.69 Aligned_cols=139 Identities=22% Similarity=0.283 Sum_probs=87.8
Q ss_pred CCccEEEeccccccccce-EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCC--
Q psy18191 62 PKPICLRFQDLLPQSKQG-LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHP-- 138 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~g-~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~-- 138 (238)
+.+.+.| ++.++...+ ...|.+..+..+|+|.|+|.+.+.. .|.... ....+.+.+..+|.+...+
T Consensus 309 p~p~i~W--~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~-~g~~~~--------~~~~~~l~V~~~P~~~~~~~p 377 (450)
T 1z7z_I 309 PRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEV-AGQLIH--------KNQTRELRVLYGPRLDERDCP 377 (450)
T ss_dssp -----------------CCCCCEEEECCGGGTTCEEEEEEEEEE-TTEEEE--------EEEEEECEEEEEEECCSTTSC
T ss_pred CCCEeEE--CCEEcCCCCceEEEEEecCcccCCceEEEEEEcCC-CCcccc--------cceeEEEEEecCCceeeccCC
Confidence 4667788 555542222 2356677788888888887765421 121110 1112233355778776653
Q ss_pred CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeE
Q psy18191 139 ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARS 218 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s 218 (238)
.+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+.. .|.+. .+ +.+|+|.|+|.|.|.+|...
T Consensus 378 ~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~----------~g~~~--~v----~~~d~G~Y~C~a~N~~G~~~- 440 (450)
T 1z7z_I 378 GNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP----------IGESV--TV----TRDLEGTYLCRARSTQGEVT- 440 (450)
T ss_dssp SEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC----------TTSCE--EC----CGGGCEEEEEEEEETTEEEE-
T ss_pred CceeEcCCCeEEEEEecccCCCCcEEEEECCcccCC----------CCCeE--eE----ehhhCeEEEEEEEeCCCcee-
Confidence 567899999999999999999999999999874432 23322 23 88999999999999999997
Q ss_pred EEEEEEEccC
Q psy18191 219 KNATLDVAGK 228 (238)
Q Consensus 219 ~~~~L~V~~~ 228 (238)
..+.|.|..+
T Consensus 441 ~~~~l~V~~~ 450 (450)
T 1z7z_I 441 REVTVNVLSP 450 (450)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEEcC
Confidence 5999999753
No 126
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.62 E-value=6.5e-15 Score=99.71 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=68.1
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.|...+.++.+.+|+++.|.|.+.+ |.|.+.|+|+|..+..+ ....+ ..++.... +.|..+..+|+|.|+|.|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~-~~~~i-~~~g~~~~-L~I~~v~~~D~G~Y~C~a 79 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAAS-PDCEI-IEDGKKHI-LILHNCQLGMTGEVSFQA 79 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCB-TTEEE-EEETTEEE-EEECSCCGGGCEEEEEEE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCC-CCEEE-EEECCEEE-EEECCCChhhCEEEEEEE
Confidence 5788988899999999999999999976 55889999999998753 22233 23333222 237788999999999999
Q ss_pred EeCCCceeEEEEEEEEcc
Q psy18191 210 RNELGFARSKNATLDVAG 227 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~ 227 (238)
.|. .+ ++.|.|.+
T Consensus 80 ~n~----~~-sa~L~V~~ 92 (93)
T 1waa_A 80 ANT----KS-AANLKVKE 92 (93)
T ss_dssp TTE----EE-EEEEEEEC
T ss_pred CCC----cE-EEEEEEEc
Confidence 884 23 77888865
No 127
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.61 E-value=1.7e-16 Score=132.01 Aligned_cols=161 Identities=14% Similarity=0.032 Sum_probs=75.0
Q ss_pred CCCccEEEeccccccccc-eE----EEEEcCCCCCCCCCceEEEeCCCcccCCc-eEEeCCCCcceecceec-CCccCCE
Q psy18191 61 YPKPICLRFQDLLPQSKQ-GL----MYLVGSQASPDYPNRFSLCNNKTWQKGLP-LKKYHPPSLPLFPGVHG-DGYRVPR 133 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~-g~----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y-~c~~~~~~~~~~~~~~~-~v~~~P~ 133 (238)
.|.+.+.|++++.++... .+ ..|.+.++..+|+|.|+|.+.+... |.. ... ....+..... ....+|.
T Consensus 152 ~p~~~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~-g~~~~~~----~~~~l~v~~~~~~~~~p~ 226 (349)
T 4dep_C 152 SVKPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPEN-GRTFHLT----RTLTVKVVGSPKNAVPPV 226 (349)
T ss_dssp TSCCEEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEET-TEEEEEE----EEEEEEEECCGGGCCSCE
T ss_pred CCCceEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeC-CEEEEEE----EEEEEEEEccCCCCCCCe
Confidence 567889999998865431 11 2577788889999999987766321 211 000 0111110000 0011677
Q ss_pred EEeCCCce--EEeCCCcEEEEEEEe----eeCCCEEEEEeCCEEeeccCCccE----EE-ecCCcE--EEEEeecCCCCC
Q psy18191 134 ITEHPASA--VVPRHEPTTLNCKAD----GYPEPRIEWYKDGSLVSAEIGSHR----IL-LPAGSL--FFLSLVHGKKDT 200 (238)
Q Consensus 134 i~~~~~~~--~~~~G~~~~L~C~~~----g~P~p~i~W~~~g~~l~~~~~~~~----~~-~~~~~l--~~~~vi~~v~~~ 200 (238)
+...+... .+.+|+.+.|.|.+. |.|.|.+.|+++|..+........ .. ...+.. ...+.|..+..+
T Consensus 227 i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 306 (349)
T 4dep_C 227 IHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSE 306 (349)
T ss_dssp EC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC--------
T ss_pred EecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHH
Confidence 76654432 788999999999998 578999999999988764111100 00 011111 111225666999
Q ss_pred CC-eEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 201 DS-GVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 201 d~-G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
|+ |.|+|.|.|..|... ..+.|.|..
T Consensus 307 d~~G~Y~C~a~N~~G~~~-~~~~l~v~~ 333 (349)
T 4dep_C 307 DLKRSYVCHARSAKGEVA-KAAKVKQKV 333 (349)
T ss_dssp -----CEEEEECSSCEEE-EECC-----
T ss_pred HcCCcEEEEEEcCCCcEE-EEEEEeeec
Confidence 99 999999999999997 588998865
No 128
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.61 E-value=4.4e-14 Score=130.11 Aligned_cols=155 Identities=18% Similarity=0.285 Sum_probs=112.1
Q ss_pred CCccEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCce
Q psy18191 62 PKPICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASA 141 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~ 141 (238)
|.+.+.|++++..+.... ..|.+.++..+|+|.|+|.+.+.. |.... .. .+. ......+|.+...+...
T Consensus 371 p~~~v~W~k~g~~~~~~~-~~L~i~~v~~~d~G~Y~C~a~n~~--g~~~~----~~--~l~--v~~~~~~p~i~~~~~~~ 439 (816)
T 3dmk_A 371 PIKTVSWMKDGKAIGHSE-SVLRIESVKKEDKGMYQCFVRNDR--ESAEA----SA--ELK--LGGRFDPPVIRQAFQEE 439 (816)
T ss_dssp CCCEEEEEETTEECSCCS-SEEEESSCCGGGCEEEEEEEECSS--CEEEE----CC--EEE--CCCSSCCCEEEEECCCE
T ss_pred CCCEEEEEECCEECCCCC-CEEEEcCCCHHHCEEEEEEEECCC--CcEEE----EE--EEE--EccccCCCceEecCcce
Confidence 467899999988665432 246788899999999998776642 21111 00 111 11124678888877888
Q ss_pred EEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEE---EecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeE
Q psy18191 142 VVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRI---LLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARS 218 (238)
Q Consensus 142 ~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~---~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s 218 (238)
.+.+|+.+.|.|.+.|.|.|.+.|+++|..+... ..... ...++.......|..+..+|+|.|+|.|.|..|...
T Consensus 440 ~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~- 517 (816)
T 3dmk_A 440 TMEPGPSVFLKCVAGGNPTPEISWELDGKKIANN-DRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAE- 517 (816)
T ss_dssp EECSSSCEEEEEEEECSSCCEEEEEETTEECCSC-TTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEE-
T ss_pred EEcCCCCEEEEEEEecCCCCEEEEEECCEECCCC-CCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEE-
Confidence 9999999999999999999999999999988653 11111 123444333344788899999999999999999986
Q ss_pred EEEEEEEccCC
Q psy18191 219 KNATLDVAGKI 229 (238)
Q Consensus 219 ~~~~L~V~~~~ 229 (238)
..+.|.|..++
T Consensus 518 ~~~~l~V~~~p 528 (816)
T 3dmk_A 518 HSAKLNVYGLP 528 (816)
T ss_dssp EEEEEEECSSC
T ss_pred EEEEEEEecCC
Confidence 59999998765
No 129
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=3e-15 Score=109.00 Aligned_cols=86 Identities=27% Similarity=0.403 Sum_probs=65.3
Q ss_pred CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC----------------------------EEeeccCCccEEEecCCcEE
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPEPRIEWYKDG----------------------------SLVSAEIGSHRILLPAGSLF 189 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g----------------------------~~l~~~~~~~~~~~~~~~l~ 189 (238)
|.++.+.+|+++.|.|.+.|.|.|.++|+|++ ..+........+...+...
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s- 103 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRS- 103 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEE-
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEE-
Confidence 56789999999999999999999999999998 3432221222222222211
Q ss_pred EEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 190 FLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 190 ~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
.+.|..+..+|+|.|+|.|.|.+|... ..+.|.|.
T Consensus 104 -~L~I~~v~~~DsG~Y~C~A~N~~G~~~-~~~~L~V~ 138 (139)
T 1gxe_A 104 -IFTVEGAEKEDEGVYTVTVKNPVGEDQ-VNLTVKVI 138 (139)
T ss_dssp -EEECSCCCTTTCEEEEEEEECSSCEEE-EEEEEEEC
T ss_pred -EEEECCCCcccCEEEEEEEEeCCceEE-EEEEEEEE
Confidence 223788899999999999999999996 59999885
No 130
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.61 E-value=6.8e-15 Score=102.24 Aligned_cols=96 Identities=17% Similarity=0.260 Sum_probs=69.3
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCC---CEEEEEeCCEEeeccCCccEEEec------CCcEEEEEeecCCCCC
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPE---PRIEWYKDGSLVSAEIGSHRILLP------AGSLFFLSLVHGKKDT 200 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~---p~i~W~~~g~~l~~~~~~~~~~~~------~~~l~~~~vi~~v~~~ 200 (238)
..|.|...|.++.+.+|+++.|.|.+.|.|. |.+.|+|++..........++... .......+.|..++.+
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 3567777788899999999999999999998 999999987322211111111110 1111223347888999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
|+|.|.|.|.|..|... ..+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~-~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDC-SNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEE-EEEEEEEE
T ss_pred cCEEEEEEEecCCCceE-EEEEEEEe
Confidence 99999999999999996 59999985
No 131
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.61 E-value=2.1e-14 Score=125.83 Aligned_cols=151 Identities=13% Similarity=0.107 Sum_probs=95.2
Q ss_pred ccEEEeccccccccc-----------eE----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCC
Q psy18191 64 PICLRFQDLLPQSKQ-----------GL----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDG 128 (238)
Q Consensus 64 ~~~~w~~~~~~~~~~-----------g~----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v 128 (238)
+.+.|++++.++... +. ..|.+..+..+|+|.|+|.+.+.. |...... ... ....+
T Consensus 146 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~--~~~~~~~------~~~-~~~~~ 216 (523)
T 2rcj_C 146 VTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEG--STVEKTV------APT-ECSAS 216 (523)
T ss_pred eEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecC--cccccce------eee-ecCCC
Confidence 389999998755321 11 246777888888999998776642 2111110 000 11123
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeee-CCC-EEEEEeCCEEeeccCCccEEEecCCcE--EEEEeecCCCCCCCeE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGY-PEP-RIEWYKDGSLVSAEIGSHRILLPAGSL--FFLSLVHGKKDTDSGV 204 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l--~~~~vi~~v~~~d~G~ 204 (238)
..+|.+...+....+.+|+.+.|.|.+.|. |.| .++|+++|..+..... ......++.. ...+.|..+..+| |.
T Consensus 217 ~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~-~~~~~~~g~~~~~s~L~i~~~~~~d-G~ 294 (523)
T 2rcj_C 217 TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTF-PAVLQSSGLYSLSSVVTVPSSSLGT-QT 294 (523)
T ss_pred CcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeC-CcEecCCCcEEEEEEEEechhhcCC-ce
Confidence 467777644444566899999999999887 878 8999999987543211 1122223321 1122356668899 99
Q ss_pred EEEEEEeCCCceeEEEEEEEEc
Q psy18191 205 YWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
|+|.|.|..|... ..+.|.|.
T Consensus 295 Y~C~a~n~~g~~~-~~~~l~v~ 315 (523)
T 2rcj_C 295 YICNVNHKPSNTK-VDKRVEPL 315 (523)
T ss_pred EEEEEEeCCCCcc-eEEecCCC
Confidence 9999999999875 36666553
No 132
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.61 E-value=9.1e-15 Score=120.12 Aligned_cols=157 Identities=11% Similarity=0.080 Sum_probs=89.1
Q ss_pred CccEEEeccccccccc----------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 63 KPICLRFQDLLPQSKQ----------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~~----------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.|++++...... ....|.+.++..+|+|.|+|.+.+.... .... .......+. ......+|
T Consensus 146 ~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~--~~~s-~~s~~~~l~--V~~~~~~p 220 (316)
T 3vh8_G 146 FEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTP--YQLS-APSDPLDIV--VTGPYEKP 220 (316)
T ss_dssp CSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCT--TBCC-CCCCCEEEE--EECSSCCC
T ss_pred CcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCC--cccc-CCCCCEEEE--ecCCCCCC
Confidence 5678999988744221 1245778889999999999887764321 0000 001111111 11123567
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
.+...+.. .+.+|+.+.|.|.+. .|.+.+.|+++|..+... ........+.......|..++ |+|.|+|.|.|.
T Consensus 221 ~i~~~~~~-~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~ 294 (316)
T 3vh8_G 221 SLSAQPGP-KVQAGESVTLSCSSR-SSYDMYHLSREGGAHERR--LPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFR 294 (316)
T ss_dssp EEEEESCS-CCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEE--EECEECTTSCEEEEEECC-------CEEEEEEEBT
T ss_pred eEEeCCCC-eecCCCcEEEEEECC-CCCcEEEEEECCCcCCCc--eeceeccCCceeEEEEcCCcC--CCEEEEEEeecC
Confidence 77766543 568999999999997 477999999999766531 111112222221222355657 999999999998
Q ss_pred CCc----eeEEEEEEEEccCCC
Q psy18191 213 LGF----ARSKNATLDVAGKIS 230 (238)
Q Consensus 213 ~G~----~~s~~~~L~V~~~~~ 230 (238)
.+. ..|..+.|.|.++|+
T Consensus 295 ~~~~~~s~~S~~~~l~V~g~p~ 316 (316)
T 3vh8_G 295 HSPYEWSDPSDPLLVSVTGNPS 316 (316)
T ss_dssp TBTTEECCCCCCEEC-------
T ss_pred CCchhccCCCCcEEEEEeCCCC
Confidence 764 345688899987763
No 133
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.61 E-value=2.9e-15 Score=102.32 Aligned_cols=91 Identities=30% Similarity=0.471 Sum_probs=70.2
Q ss_pred cCCEEEeCC----CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCc--cEEEecCCcEEEEEeecCCCCCCCe
Q psy18191 130 RVPRITEHP----ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGS--HRILLPAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 130 ~~P~i~~~~----~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~--~~~~~~~~~l~~~~vi~~v~~~d~G 203 (238)
.+|.|...+ ..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+...... .......+.|. |..+..+|+|
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~D~G 78 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLI----MESVVPSDKG 78 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEE----ECSCCGGGCE
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEE----EccCCcCCCE
Confidence 456666443 3577899999999999999999999999999988754221 12222334555 5666999999
Q ss_pred EEEEEEEeCCCceeEEEEEEEE
Q psy18191 204 VYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
.|+|.|.|..|... ..+.|.|
T Consensus 79 ~Y~C~a~N~~g~~~-~~~~l~V 99 (100)
T 3caf_A 79 NYTCVVENEYGSIN-HTYHLDV 99 (100)
T ss_dssp EEEEEEEETTEEEE-EEEEEEE
T ss_pred EEEEEEEeCCCEEE-EEEEEEE
Confidence 99999999999986 5888887
No 134
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.60 E-value=7.9e-15 Score=112.91 Aligned_cols=149 Identities=13% Similarity=0.093 Sum_probs=89.9
Q ss_pred CccEEEecccccccc----------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 63 KPICLRFQDLLPQSK----------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~----------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.|||++..... .....|.+.++...|+|.|+|.+.+...... .........+. ......+|
T Consensus 35 ~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~---~~~~s~~~~l~--V~~~~~~p 109 (201)
T 1nkr_A 35 FEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQ---VSAPSDPLDIV--IIGLYEKP 109 (201)
T ss_dssp CSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTC---CCCCCCCEEEE--EECSSCCC
T ss_pred CCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCcc---ccCCCCCEEEE--eeccCCCC
Confidence 467999999874421 1234577889999999999987643211000 00001111111 11123467
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEec---CCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLP---AGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~---~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+...+. ..+.+|+.++|.|.+.+ |.+.+.|+|+|..+.... ....... .+.|.+ ..++ |+|.|+|.|
T Consensus 110 ~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-~~~~~~~~~~~~~L~i----~~v~--d~G~Y~C~a 180 (201)
T 1nkr_A 110 SLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRL-PAGPKVNGTFQADFPL----GPAT--HGGTYRCFG 180 (201)
T ss_dssp EEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEE-ECEEEETTEEEEEEEE----EECC--SCEEEEEEE
T ss_pred ceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCccc-ccccccCCceEEEEEe----CCcC--CCeeEEEEE
Confidence 8876655 57899999999999986 568999999997665320 0111111 234444 4446 999999999
Q ss_pred EeCC----CceeEEEEEEEE
Q psy18191 210 RNEL----GFARSKNATLDV 225 (238)
Q Consensus 210 ~N~~----G~~~s~~~~L~V 225 (238)
.+.. .+..|..+.|.|
T Consensus 181 ~~~~~~~~~s~~S~~~~l~V 200 (201)
T 1nkr_A 181 SFHDSPYEWSKSSDPLLVSV 200 (201)
T ss_dssp EETTEEEEECCCCCCEEEEE
T ss_pred EcCCCCCcCCCCCCCEEEEe
Confidence 9753 222344666665
No 135
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.60 E-value=1.3e-15 Score=126.12 Aligned_cols=151 Identities=13% Similarity=0.013 Sum_probs=99.7
Q ss_pred CCCccEEEeccccccccc----eEEEEEcCCCCCCCCC-ceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEE
Q psy18191 61 YPKPICLRFQDLLPQSKQ----GLMYLVGSQASPDYPN-RFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRIT 135 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~----g~~~l~~~~~~~~~~g-~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~ 135 (238)
.+.+.+.||+++...... ....|.+..+..+|+| .|+|.+.+.. |. +... ... .+ +..+|.+.
T Consensus 65 ~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~--g~--~~~~----~~~-~v---~~~~p~~~ 132 (329)
T 3oq3_B 65 DKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKN--GD--CVQG----IVR-SH---IRKPPSCI 132 (329)
T ss_dssp CTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTT--SC--EEEE----EEE-EE---ECCCCSCE
T ss_pred CCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCC--Cc--eeeE----EEE-EE---EcCCCcEe
Confidence 356789999998744321 1235677888999999 8998777642 21 1100 000 11 12344443
Q ss_pred eCCCceEEeCCCcEEEEEEEeeeC-CCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC--
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGYP-EPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE-- 212 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~P-~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~-- 212 (238)
..+....+.+|+.+.|.|.+.|.| .|.+.|++++..+... ..++...++.|. |..+..+|+|.|+|.|.|.
T Consensus 133 ~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~--~~~~~~~~~~L~----I~~v~~~D~G~Y~C~a~n~~~ 206 (329)
T 3oq3_B 133 PETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIID--GTKYSQSGQNLI----IHNPELEDSGRYDCYVHYDDV 206 (329)
T ss_dssp EEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCS--SSSEEEETTEEE----ECSCCGGGCEEEEEEEEECCT
T ss_pred ccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCC--CceEecCCCEEE----EeecChhhCEEEEEEEEeccc
Confidence 332233356799999999999999 9999999999988643 222223356665 5666999999999999997
Q ss_pred CCceeE---EEEEEEEccCC
Q psy18191 213 LGFARS---KNATLDVAGKI 229 (238)
Q Consensus 213 ~G~~~s---~~~~L~V~~~~ 229 (238)
.|.... ..+.|.|..++
T Consensus 207 ~g~~~~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 207 RIKNDIVVSRCKILTVIPSQ 226 (329)
T ss_dssp TSSSCEEEEEEEEEEEECCC
T ss_pred CCCceeEEEeeEEEEEECCC
Confidence 655432 23778887665
No 136
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.60 E-value=8.7e-15 Score=112.31 Aligned_cols=150 Identities=15% Similarity=0.210 Sum_probs=87.4
Q ss_pred CCccEEEeccccccc--------------------cceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCccee
Q psy18191 62 PKPICLRFQDLLPQS--------------------KQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLF 121 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~--------------------~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~ 121 (238)
+.+.+.|++++..+. ..+...|.+.++..+|+|.|+|.+.+.. |....... ...+
T Consensus 26 ~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--g~~~~~~~---~~~~ 100 (201)
T 1dr9_A 26 AQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYE--KDAFKREH---LAEV 100 (201)
T ss_dssp HHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEEEEECC--TTSCEEEE---EEEE
T ss_pred cccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEEEEcCC--CCcccccc---ccEE
Confidence 567889999876431 0111357777888888888887766532 11110000 0011
Q ss_pred cceecCCccCCEEEeCCCceEEeCCCcEEEEEEE-eeeCCCEEEEEeCCEEeeccCCccEEEe-cCCcEEEEEeecCCCC
Q psy18191 122 PGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKA-DGYPEPRIEWYKDGSLVSAEIGSHRILL-PAGSLFFLSLVHGKKD 199 (238)
Q Consensus 122 ~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~~l~~~~vi~~v~~ 199 (238)
.........+|.+... ....|+.+.|.|.+ .|.|.|.++|+++|..+... ...... .++.+.....+..+..
T Consensus 101 ~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~--~~~~~~~~~~~~~~~~~~~~v~~ 174 (201)
T 1dr9_A 101 TLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAI--NTTVSQDPETELYAVSSKLDFNM 174 (201)
T ss_dssp EEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCS--EEEEEECTTTCCEEEEEEEEEET
T ss_pred EEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECccc--cceEEecCCCcEEEEEEEEEEEe
Confidence 1111101123544331 12458899999999 59999999999999888742 222222 2323322211222367
Q ss_pred CCCeEEEEEEEeCCCceeEEEEEE
Q psy18191 200 TDSGVYWCVARNELGFARSKNATL 223 (238)
Q Consensus 200 ~d~G~Y~C~a~N~~G~~~s~~~~L 223 (238)
.|.|.|+|.|.|..|... ..+.+
T Consensus 175 ~d~g~Y~C~a~n~~~~~s-~~~~~ 197 (201)
T 1dr9_A 175 TTNHSFMCLIKYGHLRVN-QTFNW 197 (201)
T ss_dssp TSCEEEEEEEEETTCCEE-EEEEE
T ss_pred cCCCEEEEEEecCcceee-eEEec
Confidence 899999999999999984 35543
No 137
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=1.5e-14 Score=103.08 Aligned_cols=101 Identities=22% Similarity=0.260 Sum_probs=71.3
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeee---CCCEEEEEeCCEEeeccCCccEEEe----c--CCcEEEEEeecCCCCCCC
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGY---PEPRIEWYKDGSLVSAEIGSHRILL----P--AGSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~---P~p~i~W~~~g~~l~~~~~~~~~~~----~--~~~l~~~~vi~~v~~~d~ 202 (238)
|.|...|.++.+.+|+++.|.|.+.|. |.|.|.|||+...........++.+ . .........|..++..|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 456677889999999999999999875 8999999997421100000111111 1 111123334788899999
Q ss_pred eEEEEEEEeCCCceeEEEEEEEEcc-CCCCCC
Q psy18191 203 GVYWCVARNELGFARSKNATLDVAG-KISTAT 233 (238)
Q Consensus 203 G~Y~C~a~N~~G~~~s~~~~L~V~~-~~~~~~ 233 (238)
|.|+|.|.|..|... ..+.|.|.. ++..|.
T Consensus 88 G~Y~Cevsn~~g~~~-~~~~L~V~~~~~~~p~ 118 (126)
T 2dav_A 88 GNYRCEVTYKDKFDS-CSFDLEVHESTGTTPN 118 (126)
T ss_dssp EEEEEEEECSSCEEE-ECCEEEEECCCCSCCC
T ss_pred EEEEEEEEeCCCcEE-EEEEEEEEecCCCCCe
Confidence 999999999999986 599999998 555544
No 138
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.59 E-value=1.5e-14 Score=111.73 Aligned_cols=156 Identities=13% Similarity=0.042 Sum_probs=92.5
Q ss_pred CCCccEEEecccc-cccc-----ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCE-
Q psy18191 61 YPKPICLRFQDLL-PQSK-----QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPR- 133 (238)
Q Consensus 61 ~~~~~~~w~~~~~-~~~~-----~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~- 133 (238)
.|.|.+.|++... +... .....|.+.++...|+|.|+|.+.+.. |.. ...+.+.|..+|.
T Consensus 28 ~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~--~~~-----------~~~~~l~V~~~p~~ 94 (202)
T 1vca_A 28 CESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCES--RKL-----------EKGIQVEIYSFPKD 94 (202)
T ss_dssp CSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETT--EEE-----------EEEEEEEEEBCCSC
T ss_pred CCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECC--ceE-----------eeEEEEEEEeCCCC
Confidence 3457799998431 2211 112347888999999999998876632 210 0111122333332
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCC---CEEEEEeCCEEeeccCCccEEEec-CCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPE---PRIEWYKDGSLVSAEIGSHRILLP-AGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~---p~i~W~~~g~~l~~~~~~~~~~~~-~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
+...+. ..+.+|+.+.|.|.+.|.++ +.+.|++++..+............ .....+...|..+..+|.|.|+|.|
T Consensus 95 ~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A 173 (202)
T 1vca_A 95 PEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRA 173 (202)
T ss_dssp CEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEE
T ss_pred CEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEE
Confidence 222222 56789999999999988654 379999999987642100000000 0111122225556777899999999
Q ss_pred EeCCCce------eEEEEEEEEccCCC
Q psy18191 210 RNELGFA------RSKNATLDVAGKIS 230 (238)
Q Consensus 210 ~N~~G~~------~s~~~~L~V~~~~~ 230 (238)
.|.+|.. ...++.|.|..+|.
T Consensus 174 ~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 174 KLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp EECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred EccccCCCCcceeEeeEEEEEEecCCC
Confidence 9998862 23478888887664
No 139
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.59 E-value=1.3e-15 Score=125.90 Aligned_cols=158 Identities=25% Similarity=0.270 Sum_probs=68.6
Q ss_pred CCCccEEEeccccccccce-----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee----------
Q psy18191 61 YPKPICLRFQDLLPQSKQG-----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH---------- 125 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g-----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~---------- 125 (238)
.|.+.+.|++++..+...+ ...|.+.++..+|+|.|+|.+.+. |.....+... +.....
T Consensus 36 ~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~---~~~~~~~~l~---V~~~~~~~~~~~~~~~ 109 (334)
T 1ry7_B 36 GPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT---QRVLCHFSVR---VTDAPSSGDDEDGEDE 109 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC---CeEEEEEEEE---EeccCccccccccccc
Confidence 3567899999987654322 235677888999999999877664 3222211100 000000
Q ss_pred ----cCCccCCEEEeC----CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEe--cCCcEEEEEeec
Q psy18191 126 ----GDGYRVPRITEH----PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILL--PAGSLFFLSLVH 195 (238)
Q Consensus 126 ----~~v~~~P~i~~~----~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~--~~~~l~~~~vi~ 195 (238)
.....+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++..+........... ....|. |.
T Consensus 110 ~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~----i~ 185 (334)
T 1ry7_B 110 AEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLV----ME 185 (334)
T ss_dssp ---------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEE----EC
T ss_pred cccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEE----EC
Confidence 000124444322 1236788999999999999999999999999988764311111111 223444 56
Q ss_pred CCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 196 GKKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.+..+|+|.|+|.|.|..|... ..+.|.|...+
T Consensus 186 ~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~~ 218 (334)
T 1ry7_B 186 SVVPSDRGNYTCVVENKFGSIR-QTYTLDVLERS 218 (334)
T ss_dssp SCCGGGCCCEEEEEEETTEEEE-EEEEEEEECCC
T ss_pred CCCcccCEEEEEEEEeCCCCEE-EEEEEEEecCC
Confidence 6799999999999999999986 58999997643
No 140
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.59 E-value=1.9e-14 Score=107.33 Aligned_cols=136 Identities=14% Similarity=0.136 Sum_probs=94.0
Q ss_pred CccEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceE
Q psy18191 63 KPICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAV 142 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~ 142 (238)
.+.+.|++++..+..... .+.+.++...|+|.|+|...+... ... +.+.+..+|.+...+ ...
T Consensus 34 ~~~~~W~~~g~~~~~~~~-~~~~~~~~~~d~G~Y~C~~~~~~~----------s~~-----~~l~v~~~~~~~~~~-~~~ 96 (170)
T 3ry4_A 34 SDSIQWFHNGNLIPTHTQ-PSYRFKANNNDSGEYTCQTGQTSL----------SDP-----VHLTVLFEWLVLQTP-HLE 96 (170)
T ss_dssp SSCEEEEETTEECTTCCS-SEEEEECCGGGCEEEEEEETTSBC----------CCC-----EEEEEECCSEEEECS-CSE
T ss_pred cceEEEEECCeEcccCcc-ceEEEecccccCeEEEEEEeCCCc----------eEe-----EEEEEECCceEecCC-Cce
Confidence 567999999886654321 123346778888999977765311 011 111233455555443 567
Q ss_pred EeCCCcEEEEEEE-eeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEE
Q psy18191 143 VPRHEPTTLNCKA-DGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNA 221 (238)
Q Consensus 143 ~~~G~~~~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~ 221 (238)
+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... ..++.|. |..+..+|+|.|+|.|.|..|...+..+
T Consensus 97 ~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-------~~~~~L~----i~~v~~~d~G~Y~C~a~n~~g~~~s~~~ 165 (170)
T 3ry4_A 97 FQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS-------HLDPTFS----IPQANHSHSGDYHCTGNIGYTLFSSKPV 165 (170)
T ss_dssp ECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE-------SSCCEEE----ESSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred eecCCeEEEEEECCCCCCCceEEEEECCeEcccc-------CCCCeEE----EEeccccCCEEEEEEEEeCcCccccccE
Confidence 8899999999999 45577999999999887632 1234444 5666999999999999999998656677
Q ss_pred EEEEc
Q psy18191 222 TLDVA 226 (238)
Q Consensus 222 ~L~V~ 226 (238)
.|.|+
T Consensus 166 ~l~V~ 170 (170)
T 3ry4_A 166 TITVQ 170 (170)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88774
No 141
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.58 E-value=6.4e-15 Score=117.18 Aligned_cols=154 Identities=14% Similarity=0.105 Sum_probs=94.3
Q ss_pred CccEEEeccccccc--------cceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEE
Q psy18191 63 KPICLRFQDLLPQS--------KQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRI 134 (238)
Q Consensus 63 ~~~~~w~~~~~~~~--------~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i 134 (238)
...+.|||++.... ......|.+.++...|+|.|+|...+... .........+. +.....+|.+
T Consensus 34 ~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~------~s~~S~~~~L~--V~~~~~~P~i 105 (242)
T 1p6f_A 34 AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGEL------WSEPSNLLDLV--VTEMYDTPTL 105 (242)
T ss_dssp CCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTE------ECCCCCCEEEE--EECCSCCCEE
T ss_pred CcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCc------cccCCcceEEE--eecccCCCce
Confidence 35789999886332 11234577888889999999987643211 11111111111 1112246777
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCC-
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNEL- 213 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~- 213 (238)
...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+... ......++.|. |..++.+|+|.|+|.|.|..
T Consensus 106 ~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~---~~~~~~~~~l~----I~~v~~~d~G~Y~C~a~n~~~ 176 (242)
T 1p6f_A 106 SVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ---RGYGKVQAEFP----LGPVTTAHRGTYRCFGSYNNH 176 (242)
T ss_dssp EEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEE---EEECSSEEEEE----EEECCGGGCEEEEEEEEEETT
T ss_pred EccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCcc---ccCCCceEEEE----eCCCccccCEEEEEEEECCCC
Confidence 7655 3568899999999998764 4699999999766531 11111233455 44559999999999999974
Q ss_pred -CceeEEEEEEEEccCCCCCC
Q psy18191 214 -GFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 214 -G~~~s~~~~L~V~~~~~~~~ 233 (238)
....+..+.|.|.+.++.|.
T Consensus 177 ~~s~~S~~~~l~V~~~~~~P~ 197 (242)
T 1p6f_A 177 AWSFPSEPVKLLVTGDIENTS 197 (242)
T ss_dssp EECCCCCCEEEEEEC------
T ss_pred cccCCCCCEEEEEeccCCCCc
Confidence 33345688999988765553
No 142
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=127.92 Aligned_cols=150 Identities=15% Similarity=0.141 Sum_probs=84.5
Q ss_pred CCCccEEEeccccccccce-----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEE
Q psy18191 61 YPKPICLRFQDLLPQSKQG-----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRIT 135 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g-----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~ 135 (238)
.|.|.+.|++++.++.... ...|.+.++..+|+|.|+|.+.|... . ....+.+.+..+|.|.
T Consensus 353 ~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g--~-----------~~~~~~L~V~~~P~i~ 419 (527)
T 3qs9_E 353 YPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDA--Q-----------FTKMFTLNIRRKPQVL 419 (527)
T ss_dssp ESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTE--E-----------EEEEEEEC--CCCEEE
T ss_pred cCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCC--c-----------EEEEEEEEEecCCeEE
Confidence 3578899999987554321 23466778888888998887776432 1 1112334467899987
Q ss_pred eCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCcc---EE-----EecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSH---RI-----LLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~---~~-----~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
..+. | ..|.|.+.|.|.|.+.|++++.......... .. ....+.......|.....+|+|.|+|
T Consensus 420 ~~~~------~--~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C 491 (527)
T 3qs9_E 420 AEAS------A--SQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKC 491 (527)
T ss_dssp ECCC------C--E---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEE
T ss_pred EeCC------C--CEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEE
Confidence 7642 2 3579999999999999998765442110000 00 01111111222244445679999999
Q ss_pred EEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 208 VARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
.|.|.+|... ..+.|.|.++.+..
T Consensus 492 ~A~N~~G~~~-~~~~L~V~~p~~~~ 515 (527)
T 3qs9_E 492 CAYNSLGTSC-ETILLNSPGPFPFI 515 (527)
T ss_dssp EEECSSCEEE-EEEEC---------
T ss_pred EEEeCCCCce-eEEEEecCCCceec
Confidence 9999999997 59999998876554
No 143
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.58 E-value=3e-16 Score=129.96 Aligned_cols=162 Identities=12% Similarity=0.106 Sum_probs=103.9
Q ss_pred CCCccEEEeccccccccce--------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 61 YPKPICLRFQDLLPQSKQG--------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g--------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.+.|++++..+.... ...|.+.++...|+|.|+|.+.+......+... ....+.........+|
T Consensus 152 ~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~----~~~~l~V~~~~~~~~P 227 (339)
T 3o4o_C 152 KTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNIT----RSIELRIKKKKEETIP 227 (339)
T ss_dssp SSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEE----EEEEEEEECCCCCCCC
T ss_pred CCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEE----EEEEEEEEcCCCCCCC
Confidence 4577899999887654331 125777888888899999877664321111110 0111111111122477
Q ss_pred EEEeCCCceEEeCCCcEEEEEEE---eeeC-CCEEEEEeCCEEeeccC-------CccEEEecCCcEE--EEEeecCCCC
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKA---DGYP-EPRIEWYKDGSLVSAEI-------GSHRILLPAGSLF--FLSLVHGKKD 199 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~---~g~P-~p~i~W~~~g~~l~~~~-------~~~~~~~~~~~l~--~~~vi~~v~~ 199 (238)
.+...+....+.+|+.+.|.|.+ .|.| .|.+.|+++|..+.... ........++... ..+.|..+..
T Consensus 228 ~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~ 307 (339)
T 3o4o_C 228 VIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTR 307 (339)
T ss_dssp EECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCC
T ss_pred EEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEech
Confidence 88777777888999999999999 8999 89999999997764221 1112222234211 1223677799
Q ss_pred CCC-eEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 200 TDS-GVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 200 ~d~-G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
+|+ |.|+|.|.|.+|... ..+.|.+..
T Consensus 308 ~d~~G~Y~C~a~N~~G~~~-~~~~~~~~~ 335 (339)
T 3o4o_C 308 EDLHMDFKCVVHNTLSFQT-LRTTVKEHH 335 (339)
T ss_dssp CSCCCCCEEEEEETTEEEC-CBCCCCC--
T ss_pred hhcCccEEEEEEeccCceE-EEEEhhHhc
Confidence 998 999999999999996 477666543
No 144
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.58 E-value=3.4e-14 Score=115.84 Aligned_cols=144 Identities=10% Similarity=0.077 Sum_probs=96.2
Q ss_pred CCCccEEEeccccccccc---------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecC----
Q psy18191 61 YPKPICLRFQDLLPQSKQ---------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGD---- 127 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~---------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~---- 127 (238)
.|.+.+.|++++.++... +...|.+.++..+|+|.|+|.+.+.. |..... .+......
T Consensus 29 ~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~--g~~~s~-------~l~v~~~~~~~~ 99 (312)
T 2y23_A 29 TPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTD--GIASSY-------LIDEEELKRLLA 99 (312)
T ss_dssp CTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSC--CCCEEE-------EECHHHHHHHHH
T ss_pred CCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCC--CcEEEE-------EEEEeeeeeeec
Confidence 567899999998865432 13578888999999999998877642 211110 11100000
Q ss_pred ---CccCCEEEeCC-CceEEeCCCcEEEEEEEe-eeCCCEEEEEeCCEEeeccCCccEEEec--CCcEEEEEeecCCCCC
Q psy18191 128 ---GYRVPRITEHP-ASAVVPRHEPTTLNCKAD-GYPEPRIEWYKDGSLVSAEIGSHRILLP--AGSLFFLSLVHGKKDT 200 (238)
Q Consensus 128 ---v~~~P~i~~~~-~~~~~~~G~~~~L~C~~~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~--~~~l~~~~vi~~v~~~ 200 (238)
...+|.+...+ ....+.+|+.+.|.|.+. +.|.|.+.|++++..+... ....+... .+. ....|..+..+
T Consensus 100 ~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~-~~~~~~~~~~~~~--~~L~i~~~~~~ 176 (312)
T 2y23_A 100 LSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG-PKYKMHIDRNTGI--IEMFMEKLQDE 176 (312)
T ss_dssp HHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSS-SSCEEEEETTTTE--EEEEESCCCGG
T ss_pred ccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeC-CcEEEEEccCCCE--EEEEEccCCcc
Confidence 00145544433 367889999999999998 8999999999999998753 22233222 233 22237788999
Q ss_pred CCeEEEEEEEeCCCce
Q psy18191 201 DSGVYWCVARNELGFA 216 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~ 216 (238)
|+|.|+|.|.|..+..
T Consensus 177 d~G~Y~C~~~~~~~~~ 192 (312)
T 2y23_A 177 DEGTYTFQLQDGKATN 192 (312)
T ss_dssp GCEEEEEEEESSSCEE
T ss_pred cCEeEEEEEEeCCceE
Confidence 9999999998866555
No 145
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.57 E-value=1.3e-15 Score=108.12 Aligned_cols=104 Identities=15% Similarity=0.224 Sum_probs=79.7
Q ss_pred ecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCE-EEEEeCCEEeeccCCcc-EE--EecCCcEEEEEeecCCCCC
Q psy18191 125 HGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPR-IEWYKDGSLVSAEIGSH-RI--LLPAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 125 ~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~-i~W~~~g~~l~~~~~~~-~~--~~~~~~l~~~~vi~~v~~~ 200 (238)
.+.+..+|.|.. +....+.+|+.+.|.|.+.|.|.|. +.|++++..+......+ .+ ...++.....+.|..+..+
T Consensus 8 ~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 86 (122)
T 2cry_A 8 TLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRA 86 (122)
T ss_dssp CCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHH
T ss_pred EEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChh
Confidence 344778999988 7888899999999999999999997 99999998887421122 22 1113322233347888999
Q ss_pred CC-eEEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 201 DS-GVYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 201 d~-G~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
|. |.|+|.|.|.+|... ..+.|.|.++..
T Consensus 87 D~~G~Y~C~a~N~~G~~~-~~~~l~V~~~~~ 116 (122)
T 2cry_A 87 DFQTIYNCTAWNSFGSDT-EIIRLKEQGSEM 116 (122)
T ss_dssp HHHSCEEEEEECSSCEEE-EEECCCCSCSSC
T ss_pred hCCceEEEEEECCCCeEE-EEEEEEECCCCC
Confidence 99 999999999999997 599999987543
No 146
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.57 E-value=1.6e-14 Score=95.89 Aligned_cols=82 Identities=21% Similarity=0.373 Sum_probs=61.3
Q ss_pred CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
..++.+.+|+++.|.|.+.| |.|.+.|+|||..|..+ ....+...++...+ .|..+..+|+|.|+|.|.| ..
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~-~~~~~~~~~~~~~L--~I~~~~~~D~G~Y~C~a~n----~~ 74 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQ-GRVQLEQAGARQVL--RVQGARSGDAGEYLCDAPQ----DS 74 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCC-SSEEEEECSSCEEE--EESSCSSTTCEEEEEECTT----TC
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEcccc-ccEEEeecCCeEEE--EecCCCCcccEEEEEEECC----EE
Confidence 45788999999999999866 88999999999999763 22333333332222 3788899999999998854 43
Q ss_pred EEEEEEEEccC
Q psy18191 218 SKNATLDVAGK 228 (238)
Q Consensus 218 s~~~~L~V~~~ 228 (238)
..+.|.|..|
T Consensus 75 -~~a~l~V~eP 84 (84)
T 2lu7_A 75 -RIFLVSVEEP 84 (84)
T ss_dssp -EEEEEEECCC
T ss_pred -EEEEEEEECC
Confidence 4888888754
No 147
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.56 E-value=2.4e-15 Score=123.00 Aligned_cols=148 Identities=11% Similarity=0.144 Sum_probs=97.1
Q ss_pred CCccEEEeccccccccc-------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEE
Q psy18191 62 PKPICLRFQDLLPQSKQ-------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRI 134 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~~-------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i 134 (238)
+.+.+.|++++..+... +...|.+.++..+|+|.|+|.+.+.. |..... +.+.+..+|.+
T Consensus 35 p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~--g~~~~~-----------~~l~v~~~~~~ 101 (317)
T 2y25_A 35 KETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDR--GKDKSR-----------LKLVDEAFKEL 101 (317)
T ss_dssp TTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSS--CEEEEE-----------ECCSTHHHHHH
T ss_pred CCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCC--CcEEEE-----------EEEEEecCccc
Confidence 56789999998755432 23578888999999999998776632 211111 11112333333
Q ss_pred EeCCCceEEeCCCcEEEEEEEee----------eCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeE
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADG----------YPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g----------~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~ 204 (238)
...+....+..|+.+.|.|.+.| .|.|.+.|+++|..+... ........++...+ .|..+..+|+|.
T Consensus 102 ~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~~~~~L--~i~~~~~~d~G~ 178 (317)
T 2y25_A 102 MMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS-DRVKTGVTGEQIWL--QINEPTPNDKGK 178 (317)
T ss_dssp HHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCC-SSEEEEECSSEEEE--EEESCCGGGCEE
T ss_pred cccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCC-CCeEEeccCCEEEE--EECcCCcccCee
Confidence 32233344567777888887766 789999999999888743 22222223332222 266779999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEc
Q psy18191 205 YWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
|+|.|.|..|... ..+.|.|.
T Consensus 179 Y~C~a~n~~g~~~-~~~~l~v~ 199 (317)
T 2y25_A 179 YVMELFDGKTGHQ-KTVDLSGQ 199 (317)
T ss_dssp EEEEEECSSCEEE-EEEEECHH
T ss_pred EEEEEEeCCceEE-EEEEEeee
Confidence 9999999999986 47777653
No 148
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.56 E-value=2.6e-14 Score=111.68 Aligned_cols=134 Identities=16% Similarity=0.263 Sum_probs=80.0
Q ss_pred EEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcE-EEEEEE-eeeCC
Q psy18191 83 LVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPT-TLNCKA-DGYPE 160 (238)
Q Consensus 83 l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~-~L~C~~-~g~P~ 160 (238)
|.+.++..+|+|.|+|.+.+.. .|..... ..+. .......|.+...+....+.+|+.+ .|.|.+ .|.|.
T Consensus 79 L~i~~v~~~D~G~Y~C~~~~~~-~~~~~~~------~~l~--V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~ 149 (231)
T 2pet_A 79 LVLAEAQVGDERDYVCVVRAGA-AGTAEAT------ARLN--VFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPA 149 (231)
T ss_dssp EEESSCCGGGCEEEEEEEECGG-GCEEEEE------EEEE--EEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSC
T ss_pred EEEcccCcccCceEEEEEEecC-CCceEEE------EEEE--EEecCCCcEEecCCcceeecCCCceEEEEEEeECcccC
Confidence 6667777788888887655532 1211111 0111 1111233677766667777889988 999999 89999
Q ss_pred CEEEEEeCCEEeeccC---CccEEE-----ecCCcEEE--EEeecCCCCCCCeEEEEEEEe-----CCCceeEEEEEEEE
Q psy18191 161 PRIEWYKDGSLVSAEI---GSHRIL-----LPAGSLFF--LSLVHGKKDTDSGVYWCVARN-----ELGFARSKNATLDV 225 (238)
Q Consensus 161 p~i~W~~~g~~l~~~~---~~~~~~-----~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N-----~~G~~~s~~~~L~V 225 (238)
|.+.|++++..+.... ....+. ..++...+ ...|......|.|.|+|.|.| ..|...+..+.|.|
T Consensus 150 p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 150 PKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp CEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred CEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 9999999999887542 111111 11222221 122444455569999999999 45552234555554
No 149
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=2.3e-14 Score=98.46 Aligned_cols=96 Identities=20% Similarity=0.336 Sum_probs=74.7
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..||.|...+.+..+.+|+++.|.|.+.+ |.|.+.|++++..+... .......++... .+.|..+..+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~--~~~~~~~~~~~~-~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKS--QKYDVVCEGTMA-MLVIRGASLKDAGEYTCE 81 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCS--SSEEEEEETTEE-EEEESSCCTTTCSEEEEE
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCC--CCEEEEECCCEE-EEEECCCCcccCEEEEEE
Confidence 36788888888999999999999999988 88899999999888653 222222334322 223788899999999999
Q ss_pred EEeCCCceeEEEEEEEEccCCCCCC
Q psy18191 209 ARNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
|.| .. ..+.|.|..++..+.
T Consensus 82 a~n----~~-~~~~l~V~~~p~~~~ 101 (103)
T 2edf_A 82 VEA----SK-STASLHVEEKASGPS 101 (103)
T ss_dssp CSS----CE-EEEEEEECCCSSSSC
T ss_pred Ecc----CC-cEEEEEEeCCCCCCC
Confidence 999 23 588999998887764
No 150
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=7.5e-15 Score=100.38 Aligned_cols=88 Identities=20% Similarity=0.378 Sum_probs=70.1
Q ss_pred CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
|..+.+.+|+.+.|.|.+.|.| |.+.|++++..+... . ++...++.|. |..+..+|+|.|+|.|.|..|...
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~--~-~~~~~~~~L~----i~~v~~~D~G~Y~C~a~n~~g~~~ 81 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAES--N-RTRITGEEVE----VQDSVPADSGLYACVTSSPSGSDT 81 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCC--S-SEEECSSEEE----ETTCCTTTCEEEEEEEEETTEEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCC--C-cEEEECCEEE----EccCCHHHCEEEEEEEEeCCceEE
Confidence 3456678999999999999987 799999999887642 2 2333355554 677799999999999999999986
Q ss_pred EEEEEEEEccCCCCCCC
Q psy18191 218 SKNATLDVAGKISTATD 234 (238)
Q Consensus 218 s~~~~L~V~~~~~~~~~ 234 (238)
..+.|.|...++.+.+
T Consensus 82 -~~~~l~V~~~~~s~~~ 97 (99)
T 2cr3_A 82 -TYFSVNVSDALPSGPS 97 (99)
T ss_dssp -EEEEECBCSCCSCCCC
T ss_pred -EEEEEEEecCCCCccc
Confidence 5999999888776654
No 151
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.56 E-value=2.1e-14 Score=120.83 Aligned_cols=157 Identities=19% Similarity=0.271 Sum_probs=92.8
Q ss_pred ccEEEecccccccc-----ce-E-----EEEEcCCCCCCCC-CceEEEeCCCcccCCceEEeCCCCcceecceecCCccC
Q psy18191 64 PICLRFQDLLPQSK-----QG-L-----MYLVGSQASPDYP-NRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRV 131 (238)
Q Consensus 64 ~~~~w~~~~~~~~~-----~g-~-----~~l~~~~~~~~~~-g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~ 131 (238)
+.+.|++++..... .+ . ..|.+.++..+|+ |.|+|.+.+.. .|..........+ .+. ......+
T Consensus 136 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~-~~~~~~~~~~~~l-~v~--~~~~~~~ 211 (388)
T 2v5m_A 136 EVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRL-TGETRLSATKGRL-VIT--EPISSSA 211 (388)
T ss_dssp EEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETT-TCCEEECSSCBCE-EEE--CCCSCEE
T ss_pred ceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCC-CCceeeccccceE-EEe--cCCcCCC
Confidence 67899998763311 01 1 1356667777777 88887665432 1111111000000 110 0000111
Q ss_pred CEEEe-CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeecc---CCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 132 PRITE-HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAE---IGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 132 P~i~~-~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~---~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
|.+.. ......+.+|+.+.|.|.+.|.|.|.+.|++++..+... ....+....++.|. |..+..+|+|.|+|
T Consensus 212 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C 287 (388)
T 2v5m_A 212 PRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLI----IKDAVVEDSGKYLC 287 (388)
T ss_dssp EECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEE----ESSCCGGGCEEEEE
T ss_pred CcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEE----ECcCCHHHCeEEEE
Confidence 22211 123466789999999999999999999999975322110 01122223355555 56679999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCC
Q psy18191 208 VARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|.|..|... ..+.|.|..++
T Consensus 288 ~a~n~~g~~~-~~~~l~V~~~p 308 (388)
T 2v5m_A 288 VVNNSVGGES-VETVLTVTAPL 308 (388)
T ss_dssp EEECSSCEEE-EEEEEEEEEEE
T ss_pred EEecCCCcee-EEEEEEEeCCC
Confidence 9999999985 58889887654
No 152
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.56 E-value=4.1e-14 Score=116.22 Aligned_cols=159 Identities=13% Similarity=0.015 Sum_probs=96.5
Q ss_pred CccEEEeccccccccc-----eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeC
Q psy18191 63 KPICLRFQDLLPQSKQ-----GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEH 137 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~~-----g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~ 137 (238)
.+.+.|+|++...... ....|.+.++..+|+|.|+|.+.+...... .........+. ......+|.+...
T Consensus 51 ~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~---~~~~s~~~~l~--V~~~~~~p~~~~~ 125 (316)
T 3vh8_G 51 FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTG---WSAPSNPVVIM--VTGNHRKPSLLAH 125 (316)
T ss_dssp CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSS---BCCCCCCEEEE--EECSSCCCEEEEE
T ss_pred CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcc---eecCCCcEEEE--EecCCCCCeEEec
Confidence 5689999998754321 123567788999999999987654211000 00001111111 1112346777766
Q ss_pred CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCce-
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFA- 216 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~- 216 (238)
+... +.+|+.+.|.|.+. .+.+.+.|++++..+... ................|..++.+|+|.|+|.|.|..|..
T Consensus 126 ~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 201 (316)
T 3vh8_G 126 PGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPS--RLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQ 201 (316)
T ss_dssp SCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCE--EEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTB
T ss_pred CCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccc--eeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCcc
Confidence 6554 88999999999994 466789999999776421 001111111111122367779999999999999998852
Q ss_pred ---eEEEEEEEEccCCC
Q psy18191 217 ---RSKNATLDVAGKIS 230 (238)
Q Consensus 217 ---~s~~~~L~V~~~~~ 230 (238)
.+..+.|.|...+.
T Consensus 202 ~s~~s~~~~l~V~~~~~ 218 (316)
T 3vh8_G 202 LSAPSDPLDIVVTGPYE 218 (316)
T ss_dssp CCCCCCCEEEEEECSSC
T ss_pred ccCCCCCEEEEecCCCC
Confidence 13467788766443
No 153
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.55 E-value=1.6e-14 Score=115.98 Aligned_cols=154 Identities=13% Similarity=0.061 Sum_probs=95.2
Q ss_pred CccEEEecccccccc----------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC
Q psy18191 63 KPICLRFQDLLPQSK----------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP 132 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~----------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P 132 (238)
.+.+.|||++..... .....|.+..+..+|+|.|+|.+.+...... .........+. +.....+|
T Consensus 34 ~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~---~s~~S~~~~L~--V~~~~~~P 108 (257)
T 1b6u_A 34 FQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQ---LSAPSDPLDIV--ITGLYEKP 108 (257)
T ss_dssp CSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTS---CCCCCCCEEEE--EECSSCCC
T ss_pred CcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCcc---ccccCCCEEEe--cccCCCCc
Confidence 457999999874321 1234577889999999999987654211000 00001111111 11123567
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEe----cCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILL----PAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~----~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+...+. ..+.+|++++|.|.+.+.| +.+.|+|+|..+.... ..... .++.|.+. .++ |+|.|+|.
T Consensus 109 ~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~--~~~~~~~~~~~~~l~I~----~v~--D~G~Y~C~ 178 (257)
T 1b6u_A 109 SLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRF--SAGPKVNGTFQADFPLG----PAT--HGGTYRCF 178 (257)
T ss_dssp EEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECC--BCBCCSSSCCBEEEEEE----ECC--SCEEEEEE
T ss_pred ceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCccc--ccccccCCceeEEEEec----ccc--cCEEEEEE
Confidence 8876655 3578999999999998764 7999999998765421 11111 12345544 346 99999999
Q ss_pred EEeCC----CceeEEEEEEEEccCCCC
Q psy18191 209 ARNEL----GFARSKNATLDVAGKIST 231 (238)
Q Consensus 209 a~N~~----G~~~s~~~~L~V~~~~~~ 231 (238)
|.|.. ....+..+.|.|.+++..
T Consensus 179 a~~~~~p~~~s~~S~pl~L~V~g~p~~ 205 (257)
T 1b6u_A 179 GSFRDSPYEWSNSSDPLLVSVTGNPSN 205 (257)
T ss_dssp EECSSCTTBBCCCCCCEEECCBCCC--
T ss_pred EEcCCCCcccccCCCCEEEEEeccCCC
Confidence 99753 333456789999887643
No 154
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.55 E-value=8.7e-15 Score=113.26 Aligned_cols=134 Identities=15% Similarity=0.179 Sum_probs=83.3
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-C
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-P 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P 159 (238)
..|.|.++.++|+|.|+|.+.+.. |..... . ....+. +......+|.+...+....+.+|+.+.|.|.+.|. |
T Consensus 70 ~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~-~--~~~~l~-V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p 143 (213)
T 3mj8_L 70 ATLTISKAQAGDEADYYCQSWDGT--NSAWVF-G--SGTKVT-VLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYP 143 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETT--TTEEEE-B--CCEEEE-EECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred EEEEECCCChhhCEEEEEEeccCC--cceeEE-c--CceEEE-EeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeC
Confidence 457888899999999997765531 100000 0 111111 11112367888776655555689999999999986 3
Q ss_pred C-CEEEEEeCCEEeeccCC-ccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCceeEEEEE
Q psy18191 160 E-PRIEWYKDGSLVSAEIG-SHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFARSKNAT 222 (238)
Q Consensus 160 ~-p~i~W~~~g~~l~~~~~-~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~ 222 (238)
+ +.+.|+++|..+..... ..... .++...+ .+.|..+..+|.|.|+|.|.|..+... +.+.
T Consensus 144 ~~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~-~~~~ 208 (213)
T 3mj8_L 144 ADVAVTWEADGTPITQGVKTTQPSK-SDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVE-KSLS 208 (213)
T ss_dssp SCCEEEEEETTEEECTTEEECCCEE-ETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEE-EEEC
T ss_pred CCeEEEEEcCCcccCCCcccCCcCc-cCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEE-eeec
Confidence 3 39999999998864210 00111 2333322 123566688899999999999997765 3443
No 155
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=1.9e-14 Score=99.02 Aligned_cols=94 Identities=19% Similarity=0.262 Sum_probs=70.3
Q ss_pred cCCEEEeCCCc---eEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEE
Q psy18191 130 RVPRITEHPAS---AVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 130 ~~P~i~~~~~~---~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
.+|.+...|.. +.+.+|+++.|.|.+.|.|.| +.|++++..+... ....+...+....+ .|..+..+|+|.|+
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~-~~~~~~~~~~~~~L--~I~~~~~~D~G~Y~ 81 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEES-ELLVVKMDGRKHRL--ILPEAKVQDSGEFE 81 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCB-TTBEEEEETTEEEE--EESSCCTTTCEEEE
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCC-CCEEEEeCCCEEEE--EECCCChhhCEEEE
Confidence 46666666666 788999999999999999999 9999999988753 22333322322222 37788999999999
Q ss_pred EEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 207 CVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
|.|.|..+ .+.|.|..++.++
T Consensus 82 C~a~n~~~-----~~~l~V~~~P~pp 102 (104)
T 2e6p_A 82 CRTEGVSA-----FFGVTVQDPSGPS 102 (104)
T ss_dssp EECSSCCC-----CEEEEEECCCCSS
T ss_pred EEECCceE-----EEEEEEcCCCCCc
Confidence 99999743 6678888777655
No 156
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.55 E-value=7.9e-14 Score=110.42 Aligned_cols=138 Identities=18% Similarity=0.307 Sum_probs=84.8
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecC-----------CccCCEEEeCCCceEEeCCCcE
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGD-----------GYRVPRITEHPASAVVPRHEPT 149 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~-----------v~~~P~i~~~~~~~~~~~G~~~ 149 (238)
..|.|.++.++|+|.|.|.+.+....+ .+... ..+. +... ...+|.+...+..+.+.+|+++
T Consensus 81 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~----~~~~~--~~l~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v 153 (247)
T 2ghw_B 81 LYLQMNSLRAEDTAVYYCARDRSYYLD----YWGQG--TLVT-VSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERA 153 (247)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEE----EECCC--EEEE-ECSCC------------CCCCEEEECSEEEECTTSCE
T ss_pred EEEEECcCCHHHCEEEEEeeeccCCcc----ccCCc--eEEE-EecccccccccccCCCCcceEEEccCCEEEecCCCcE
Confidence 358888999999999997766531100 11000 1111 0000 1235566666777889999999
Q ss_pred EEEEEEeeeCCCEEEEEe--CCEEeec----------cCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 150 TLNCKADGYPEPRIEWYK--DGSLVSA----------EIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 150 ~L~C~~~g~P~p~i~W~~--~g~~l~~----------~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
.|.|.+.+.|.|.+.|++ ++..+.. ....+......+.. ..+.|..+..+|+|.|.|.|.|..+...
T Consensus 154 ~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~~~~~~~~ 232 (247)
T 2ghw_B 154 TLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTD-FTLTISRLEPEDFAVYYCQQRSNWPPTF 232 (247)
T ss_dssp EEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSE-EEEEECSCCGGGCEEEEEEECSSSSCEE
T ss_pred EEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCe-EEEEECcCCHHHCEEEEEEEccCCCceE
Confidence 999999999999999999 5543310 00111111112211 1223788899999999999999655443
Q ss_pred EEEEEEEEc
Q psy18191 218 SKNATLDVA 226 (238)
Q Consensus 218 s~~~~L~V~ 226 (238)
.....|.|.
T Consensus 233 g~~t~l~V~ 241 (247)
T 2ghw_B 233 GQGTKVEVK 241 (247)
T ss_dssp CCCEEEEEC
T ss_pred cCCEEEEEC
Confidence 345677876
No 157
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=1.7e-14 Score=101.78 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=69.1
Q ss_pred CCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEe-cCC-cEEEEEeecCCCCCCCeE
Q psy18191 127 DGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILL-PAG-SLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 127 ~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~-~l~~~~vi~~v~~~d~G~ 204 (238)
.+..+|.+...... . ..+...|.|.+.|.|.|.+.|+++|..+.... ...... ..+ .....+.|..+..+|+|.
T Consensus 4 ~V~~pP~i~~~~~~-~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 79 (118)
T 1wwc_A 4 TVYYPPRVVSLEEP-E--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESK-IIHVEYYQEGEISEGCLLFNKPTHYNNGN 79 (118)
T ss_dssp CCCCCCCCCCCCCC-C--CCCEEEEEEEEECSSCCEEEEEETTEECCCSS-SEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred EEecCCceeccCCC-e--eccceEEEEEeeeeCCCeEEEEECCEECCCCC-ceeEEEeccCccccEEEEECCCChhcCEE
Confidence 35678887554222 1 23567899999999999999999999887542 122221 111 011122366779999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEccCCCC
Q psy18191 205 YWCVARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
|+|.|.|..|... ..+.|.|...|..
T Consensus 80 Y~C~a~N~~G~~~-~~~~l~v~~~P~~ 105 (118)
T 1wwc_A 80 YTLIAKNPLGTAN-QTINGHFLKEPFP 105 (118)
T ss_dssp EEEEEEETTEEEE-EEEEECCSCCCCC
T ss_pred EEEEEECCCCeEe-eEEEEEEccCCCc
Confidence 9999999999997 4999888776543
No 158
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.54 E-value=1.5e-14 Score=120.19 Aligned_cols=147 Identities=12% Similarity=0.103 Sum_probs=96.2
Q ss_pred CCccEEEecccc------ccc----cceE----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecC
Q psy18191 62 PKPICLRFQDLL------PQS----KQGL----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGD 127 (238)
Q Consensus 62 ~~~~~~w~~~~~------~~~----~~g~----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~ 127 (238)
+.+.+.|++++. ++. ...+ ..|.+.++..+|+|.|+|.+.+.. |..... ..+.
T Consensus 46 ~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~--~~~~~~------~~l~----- 112 (349)
T 4dep_C 46 AGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTT--YCSKVA------FPLE----- 112 (349)
T ss_dssp TTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEEEEECSS--CEEEEE------EEEE-----
T ss_pred CCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEEEEecCC--ceEEEE------EEEE-----
Confidence 468999999883 121 1111 257788899999999998776632 211111 0111
Q ss_pred CccCCEE----EeCCCceEEeCCCcEEEEEEE-----eeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCC
Q psy18191 128 GYRVPRI----TEHPASAVVPRHEPTTLNCKA-----DGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKK 198 (238)
Q Consensus 128 v~~~P~i----~~~~~~~~~~~G~~~~L~C~~-----~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~ 198 (238)
+..+|.+ ...+....+.+|+.+.|.|.+ .|.|.|.+.|++++..+.. ...+...+..|. |..+.
T Consensus 113 V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~---~~~~~~~~~~L~----i~~v~ 185 (349)
T 4dep_C 113 VVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQN---FNNVIPEGMNLS----FLIAL 185 (349)
T ss_dssp EECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCS---CSSEEEETTEEE----EESCC
T ss_pred EecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCC---ccceeecCCEEE----Eeeee
Confidence 1122211 122345677899999999985 7889999999999998863 223333445565 45569
Q ss_pred CCCCeEEEEEEEeCC-Cce--eEEEEEEEEccC
Q psy18191 199 DTDSGVYWCVARNEL-GFA--RSKNATLDVAGK 228 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~~-G~~--~s~~~~L~V~~~ 228 (238)
.+|+|.|+|.|.|.. |.. .+..+.|.|..+
T Consensus 186 ~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~ 218 (349)
T 4dep_C 186 ISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGS 218 (349)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred ecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEcc
Confidence 999999999999998 554 245778888654
No 159
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.54 E-value=2.9e-14 Score=116.74 Aligned_cols=150 Identities=15% Similarity=0.102 Sum_probs=97.1
Q ss_pred ccCCCccEEEeccccc--ccc---ce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 59 GFYPKPICLRFQDLLP--QSK---QG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 59 ~~~~~~~~~w~~~~~~--~~~---~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
+..+.+.+.|++++.. ... .. -..|.+.++..+|+|.|+|.+.+.. |..... +.... ..
T Consensus 31 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~--g~~~~~--------~~v~v--~~ 98 (315)
T 1itb_B 31 PNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS--YCLRIK--------ISAKF--VE 98 (315)
T ss_dssp SCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSS--CCCCEE--------CCCEE--EC
T ss_pred CcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCc--eEEEEE--------EEEEE--eC
Confidence 3334678999998752 111 11 1257788899999999998776642 221111 11000 11
Q ss_pred cCCEEEeCC---CceEEeCCCcEEEEEEE------eeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCC
Q psy18191 130 RVPRITEHP---ASAVVPRHEPTTLNCKA------DGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 130 ~~P~i~~~~---~~~~~~~G~~~~L~C~~------~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~ 200 (238)
.+|.+...+ ....+..|+++.|.|.+ .|.|.|.+.|++++..+... ..+....++.|. |..+..+
T Consensus 99 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~--~~~~~~~~~~L~----i~~v~~~ 172 (315)
T 1itb_B 99 NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLD--NIHFSGVKDRLI----VMNVAEK 172 (315)
T ss_dssp CCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCC--SSSEEEETTEEE----ESSCCGG
T ss_pred CCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCc--cceEeecCceEE----EEeceeh
Confidence 233332221 23567899999999998 89999999999999998653 223344466665 5666999
Q ss_pred CCeEEEEEEE-eCCCceeE--EEEEEEEc
Q psy18191 201 DSGVYWCVAR-NELGFARS--KNATLDVA 226 (238)
Q Consensus 201 d~G~Y~C~a~-N~~G~~~s--~~~~L~V~ 226 (238)
|+|.|+|.|. |..|...+ ..+.|.+.
T Consensus 173 d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~ 201 (315)
T 1itb_B 173 HRGNYTCHASYTYLGKQYPITRVIEFITL 201 (315)
T ss_dssp GCEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred hCcEEEEEEEcCCCCcEEEEEEEEEEEEe
Confidence 9999999999 88898732 24444443
No 160
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.54 E-value=1.3e-13 Score=106.88 Aligned_cols=103 Identities=22% Similarity=0.380 Sum_probs=79.3
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
...+|.| ..+.++.+.+|+.+.|.|.+.|.|.|.+.|+++|..+.............+.... +.|..+..+|+|.|+|
T Consensus 16 ~~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~-L~i~~~~~~d~G~Y~C 93 (215)
T 3mtr_A 16 HMYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASY-LEVTPDSENDFGNYNC 93 (215)
T ss_dssp CCEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEE-EEECCCSGGGCEEEEE
T ss_pred eecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeE-EEEecCChhhCeEEEE
Confidence 3467888 4667789999999999999999999999999999988754222222222111111 2267779999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCCCCCC
Q psy18191 208 VARNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
.|.|..|... ..+.|.|..++.+|.
T Consensus 94 ~a~n~~g~~~-~~~~l~v~~~P~~p~ 118 (215)
T 3mtr_A 94 TAVNRIGQES-LEFILVQADTPSSPS 118 (215)
T ss_dssp EEECSSCEEE-EEEEEEECCCCCCCE
T ss_pred EEEECCCceE-EEEEEEECCCCCCCc
Confidence 9999999996 599999988887764
No 161
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.53 E-value=8.5e-14 Score=96.36 Aligned_cols=99 Identities=20% Similarity=0.311 Sum_probs=71.2
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeee--CCCEEEEEeCCEEeeccCCccEEEe--cCC-c--EEEEEeecCCCCC
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGY--PEPRIEWYKDGSLVSAEIGSHRILL--PAG-S--LFFLSLVHGKKDT 200 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~g~~l~~~~~~~~~~~--~~~-~--l~~~~vi~~v~~~ 200 (238)
...+|.|...|....+.+|+++.|.|.+.|. |.|.+.|++++..+........... .++ . ....+.|..+..+
T Consensus 7 ~~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 86 (112)
T 3so5_A 7 DFPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFT 86 (112)
T ss_dssp -CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGG
T ss_pred CCCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccc
Confidence 3468999998889999999999999999865 4689999999988764210001111 110 0 0112236778999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
|+|.|+|.|.|..|...+..+.|.|.
T Consensus 87 D~G~Y~C~a~n~~g~~~s~~~~l~V~ 112 (112)
T 3so5_A 87 SEGXYQCVISNHFGSSYSVXAXLTIN 112 (112)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred cCCeEEEEEEeCCCcEEEeEEEEEeC
Confidence 99999999999999954468888773
No 162
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=3.6e-14 Score=97.57 Aligned_cols=92 Identities=18% Similarity=0.309 Sum_probs=68.8
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCC-ccEEEecC--CcEEEEEeecCCCCCCCeEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIG-SHRILLPA--GSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~~~~--~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
|+.|...+.++.+.+|+++.|.|.+.+ |.|.+.|++++..+..... ...+...+ ..|.+ ..+..+|+|.|+|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I----~~~~~~D~G~Y~C 81 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILII----EGATKADAAEYSV 81 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEE----EEECTTTCSEEEE
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEE----CCCCcccCEEEEE
Confidence 444667778899999999999999987 7799999999998875421 12333222 23444 4559999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 208 VARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
.|.| .. ..+.|.|..++.++
T Consensus 82 ~a~n----~~-~~~~l~V~~~p~p~ 101 (103)
T 1x44_A 82 MTTG----GQ-SSAKLSVDLKSGPS 101 (103)
T ss_dssp EETT----EE-EEEEEEEECCCSCC
T ss_pred EECC----Cc-EEEEEEEeCCCCCC
Confidence 9988 33 48899998877654
No 163
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.53 E-value=2.2e-14 Score=116.16 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=96.9
Q ss_pred cEEEecccccc---ccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCce
Q psy18191 65 ICLRFQDLLPQ---SKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASA 141 (238)
Q Consensus 65 ~~~w~~~~~~~---~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~ 141 (238)
.+.|++++..+ ...+ ..|.+.++..+|+|.|+|.+.+ |. . ..+.+.+..+|.+...+...
T Consensus 39 ~i~W~~~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~~~n----g~-~-----------~~~~l~V~~~~~~~~~~~~~ 101 (290)
T 2o26_X 39 FVRWTFKTYFNEMVENKK-NEWIQEKAEATRTGTYTCSNSN----GL-T-----------SSIYVFVRDPAKLFLVGLPL 101 (290)
T ss_dssp EEEEEEECSSSCEEEECS-SEEEETTCCGGGCEEEEEEESS----SC-E-----------EEEEEEEECSSCCBCCCCCE
T ss_pred cEEEecCCcceeeecCCC-ceEEEeccCHHhCeEEEEEeeC----Cc-c-----------EEEEEEEeCCCcccccccce
Confidence 78999998755 1122 4677788888899999977766 21 1 11111133455544556678
Q ss_pred EEeCCCcEEEEEEEeeeCC-CEEEE-EeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCe-EEEEEEEeCCCceeE
Q psy18191 142 VVPRHEPTTLNCKADGYPE-PRIEW-YKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSG-VYWCVARNELGFARS 218 (238)
Q Consensus 142 ~~~~G~~~~L~C~~~g~P~-p~i~W-~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G-~Y~C~a~N~~G~~~s 218 (238)
.+.+|+.+.|.|.+.+ |. |.+.| +++|..+.. .........+.|. |..+..+|+| .|+|.|.|..|...+
T Consensus 102 ~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~--~~~~~~~~~~~L~----i~~v~~~d~G~~Y~C~a~n~~~~~~s 174 (290)
T 2o26_X 102 FGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPT--DLTFVPNPKAGIT----IKNVKRAYHRLCVRCAAQRDGTWLHS 174 (290)
T ss_dssp EEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCT--TCEEEEETTTEEE----EESCCGGGTTCEEEEEEEETTEEEEC
T ss_pred EEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCC--CCceeeCCCCCEE----EecccHHHCCCEEEEEEEECCceEEe
Confidence 8899999999999986 77 99999 568877753 2222333455665 5566999999 999999999777554
Q ss_pred EEEEEEEcc
Q psy18191 219 KNATLDVAG 227 (238)
Q Consensus 219 ~~~~L~V~~ 227 (238)
..+.|.|..
T Consensus 175 ~~~~l~V~~ 183 (290)
T 2o26_X 175 DKFTLKVRE 183 (290)
T ss_dssp CCEEEEEEC
T ss_pred EEEEEEEEe
Confidence 468888863
No 164
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.53 E-value=3.1e-14 Score=119.18 Aligned_cols=145 Identities=11% Similarity=-0.059 Sum_probs=96.6
Q ss_pred CCCccEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCc
Q psy18191 61 YPKPICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPAS 140 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~ 140 (238)
.|.+.+.|++++..... +...|.+.++..+|+|.|+|.+.+.. + ... . .+...+..+|.. +..
T Consensus 123 ~p~~~v~W~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~~~~--~----~~~------~-~~~l~v~~~p~~---~~~ 185 (363)
T 1wio_A 123 GSSPSVQCRSPRGKNIQ-GGKTLSVSQLELQDSGTWTCTVLQNQ--K----KVE------F-KIDIVVLAFQKA---SSI 185 (363)
T ss_dssp TCCCCEEEECSSSCEEE-ESSEEEECSBCGGGCEECEEEEEETT--E----EEE------E-CCEECEECCSCS---EEE
T ss_pred CCCCeEEEEcCCCcccc-cceEEEEeeCChhcCCEEEEEEecCC--C----eEE------E-EEEEEEecCCCC---CCc
Confidence 45778999998764322 23457788899999999998776531 1 100 0 011112233332 145
Q ss_pred eEEeCCCcEEEEEEEee-----eCCCEEEEEeCCEEeecc-------CCccEEEe----------cCC--cEEEEEeecC
Q psy18191 141 AVVPRHEPTTLNCKADG-----YPEPRIEWYKDGSLVSAE-------IGSHRILL----------PAG--SLFFLSLVHG 196 (238)
Q Consensus 141 ~~~~~G~~~~L~C~~~g-----~P~p~i~W~~~g~~l~~~-------~~~~~~~~----------~~~--~l~~~~vi~~ 196 (238)
..+.+|+.+.|.|.+.| .|.|.+.|+++|..+... .....+.. .++ .|. |..
T Consensus 186 ~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~ 261 (363)
T 1wio_A 186 VYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLT----LPQ 261 (363)
T ss_dssp EEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEE----ESS
T ss_pred eEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEE----Ecc
Confidence 67889999999998877 889999999999877641 11111111 222 333 667
Q ss_pred CCCCCCeEEEEEEEeC--CCceeEEEEEEEEcc
Q psy18191 197 KKDTDSGVYWCVARNE--LGFARSKNATLDVAG 227 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~--~G~~~s~~~~L~V~~ 227 (238)
+..+|+|.|+|.|.|. .|... ..+.|.|..
T Consensus 262 v~~~d~G~Y~C~a~n~~~~g~~~-~~~~l~V~~ 293 (363)
T 1wio_A 262 ALPQYAGSGNLTLALEAKTGKLH-QEVNLVVMR 293 (363)
T ss_dssp BCGGGCEEEEEEECBTTTTCCEE-EEEEEEEEE
T ss_pred CCcCcCcEEEEEEEEhhhcCeEE-EEEeEEEEE
Confidence 7999999999999999 99885 588888753
No 165
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=120.95 Aligned_cols=148 Identities=15% Similarity=0.112 Sum_probs=92.1
Q ss_pred CCc-cEEEecccccccc---------ce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecC
Q psy18191 62 PKP-ICLRFQDLLPQSK---------QG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGD 127 (238)
Q Consensus 62 ~~~-~~~w~~~~~~~~~---------~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~ 127 (238)
|.| .+.|++++..... .| ...|.+..+..+| |.|+|.+.+... .... . ....
T Consensus 248 P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g--~~~~--------~---~~l~ 313 (523)
T 2rcj_C 248 PQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS--NTKV--------D---KRVE 313 (523)
T ss_pred CCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCC--Ccce--------E---EecC
Confidence 456 7999999864321 12 1256777777788 888887776432 1111 0 1111
Q ss_pred CccCCEE-EeCCCceE-EeCCCcEEEEEEEeeeCC----CEEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCC
Q psy18191 128 GYRVPRI-TEHPASAV-VPRHEPTTLNCKADGYPE----PRIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKD 199 (238)
Q Consensus 128 v~~~P~i-~~~~~~~~-~~~G~~~~L~C~~~g~P~----p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~ 199 (238)
+..+|.+ ...|.... +.+|+.+.|.|.+.|.|+ +.++|+|+|..+............++.+.. .+.|..+..
T Consensus 314 v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~ 393 (523)
T 2rcj_C 314 PLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNW 393 (523)
T ss_pred CCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHh
Confidence 2234554 33444343 788999999999998754 489999999988753211122233444332 123566688
Q ss_pred CCCeEEEEEEEeCCCceeEEEEEEE
Q psy18191 200 TDSGVYWCVARNELGFARSKNATLD 224 (238)
Q Consensus 200 ~d~G~Y~C~a~N~~G~~~s~~~~L~ 224 (238)
+|+|.|+|.|.|..|... ....|.
T Consensus 394 ~d~G~Y~C~a~n~~~~~~-~~~~~~ 417 (523)
T 2rcj_C 394 LDGKEYKCKVSNKALPAP-IEKTIS 417 (523)
T ss_pred cCCCeEEEEEeCCCCCCc-eeEEEE
Confidence 999999999999887764 244444
No 166
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.52 E-value=4.3e-14 Score=95.69 Aligned_cols=85 Identities=26% Similarity=0.418 Sum_probs=66.4
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
.|....+.+|+++.|.|.+.| .|.+.|+++|..+... .+....++.|. |..+..+|+|.|+|.|.|..|..
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~---~~~~~~~~~L~----i~~~~~~D~G~Y~C~a~n~~g~~ 77 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPN---NRTVLIGEYLQ----IKGATPRDSGLYACTAARTVDSE 77 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCC---SSEEEETTEEE----ECSCCGGGCEEEEEEEECSSCEE
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCC---ceEEEeCCEEE----ECcCCcccCEEEEEEEccCCCcE
Confidence 456678899999999999987 5799999999988642 23334456665 56669999999999999999988
Q ss_pred eEEEEEEEEccCCCC
Q psy18191 217 RSKNATLDVAGKIST 231 (238)
Q Consensus 217 ~s~~~~L~V~~~~~~ 231 (238)
. ..+.|.|..+++.
T Consensus 78 ~-~~~~l~V~~~~~~ 91 (95)
T 4hwu_A 78 T-WIFMVNVTDAAEN 91 (95)
T ss_dssp E-EEEEEEECCC---
T ss_pred E-EEEEEEEeCCccc
Confidence 6 5999999877654
No 167
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.52 E-value=3.7e-14 Score=95.54 Aligned_cols=87 Identities=21% Similarity=0.315 Sum_probs=61.7
Q ss_pred cCCEEEeCCCceE--EeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 130 RVPRITEHPASAV--VPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 130 ~~P~i~~~~~~~~--~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
.||.|..++.+.. +.+|+++.|.|.+.+ |.|.+.|+|||..|..+ ....+...++... +.|..+..+|+|.|+|
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~-~~~~i~~~~~~~~--L~I~~v~~~D~G~Y~C 78 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEES-DFVVLENEGPHRR--LVLPATQPSDGGEFQC 78 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCC-SSCEEEEETTEEE--EEESSCCGGGCSEEEE
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeee-eeeeEEecCCeEE--EEeCCCChhhcEEEEE
Confidence 4666766555544 468999999999865 88999999999998764 3333433333222 2378889999999999
Q ss_pred EEEeCCCceeEEEEEEEE
Q psy18191 208 VARNELGFARSKNATLDV 225 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V 225 (238)
.|.|. . ..+.|.|
T Consensus 79 ~a~n~----~-~~~~ltV 91 (91)
T 2lvc_A 79 VAGDE----C-AYFTVTI 91 (91)
T ss_dssp ECSSC----E-EEEEEEC
T ss_pred EEcce----E-EEEEEEC
Confidence 98664 2 3666654
No 168
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.51 E-value=1.7e-13 Score=121.51 Aligned_cols=135 Identities=21% Similarity=0.184 Sum_probs=90.6
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-C
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-P 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P 159 (238)
..|.+.++..+|+|.|+|.+.+.. |.. ...+.+.+..+|.+...+....+.+|+.+.|.|.+.+. |
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~~~n~~--~~~-----------~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~ 141 (585)
T 2ocw_A 75 FVVNIAQLSQDDSGRYKCGLGINS--RGL-----------SFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENA 141 (585)
T ss_pred EEEEECCCCcccCEEEEEEcccCC--CCc-----------eEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCC
Confidence 357788888888899887665532 111 11122335678888877888999999999999999865 4
Q ss_pred CCEEEEEeCCEEee----cc-------CCccEEEecCCc--EEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 160 EPRIEWYKDGSLVS----AE-------IGSHRILLPAGS--LFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 160 ~p~i~W~~~g~~l~----~~-------~~~~~~~~~~~~--l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
.+.+.|++++..+. .. ...+.....++. ....+.|..+..+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 142 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~ 220 (585)
T 2ocw_A 142 QKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNK-KNADLQVL 220 (585)
T ss_pred CccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCcccc-ceEEEEEc
Confidence 57899999875321 10 011111122221 011122566699999999999999999986 59999997
Q ss_pred cCC
Q psy18191 227 GKI 229 (238)
Q Consensus 227 ~~~ 229 (238)
.++
T Consensus 221 ~~~ 223 (585)
T 2ocw_A 221 KPE 223 (585)
T ss_pred cCC
Confidence 654
No 169
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.51 E-value=6.3e-14 Score=95.33 Aligned_cols=87 Identities=23% Similarity=0.289 Sum_probs=66.6
Q ss_pred CCEEEe-CCCceEEeCCCcEEEEEEEe-eeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 131 VPRITE-HPASAVVPRHEPTTLNCKAD-GYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 131 ~P~i~~-~~~~~~~~~G~~~~L~C~~~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
+|.+.. .+....+.+|+++.|.|.+. |.|.|.+.|++++..... .. ....++.|. |..+..+|+|.|.|.
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~---~~-~~~~~~~L~----i~~v~~~D~G~Y~C~ 80 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP---SR-AMDFNGILT----IRNVQPSDAGTYVCT 80 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCC---TT-EEEETTEEE----ECSCCGGGCEEEEEE
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCC---ce-eecCCCEEE----EeCCChhhCEEEEEE
Confidence 444444 35677899999999999998 689999999997543332 12 223456665 566699999999999
Q ss_pred EEeCCCceeEEEEEEEEc
Q psy18191 209 ARNELGFARSKNATLDVA 226 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~ 226 (238)
|.|..|... ..+.|.|.
T Consensus 81 a~n~~g~~~-~~~~l~V~ 97 (98)
T 1gl4_B 81 GSNMFAMDQ-GTATLHVQ 97 (98)
T ss_dssp EECSSCEEE-EEEEEEEC
T ss_pred ecCCCCccc-cEEEEEEe
Confidence 999999986 58899885
No 170
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.50 E-value=2.4e-13 Score=92.90 Aligned_cols=90 Identities=18% Similarity=0.220 Sum_probs=68.6
Q ss_pred cCCEEEeCCCc-eEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCC--cEEEEEeecCCCCCCCeEEE
Q psy18191 130 RVPRITEHPAS-AVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAG--SLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 130 ~~P~i~~~~~~-~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~--~l~~~~vi~~v~~~d~G~Y~ 206 (238)
.+|.|...+.+ ..+.+|+++.|.|.+. .|.|.+.|+++|..+... ....+...+. .|. |..+..+|+|.|+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~-~~~~~~~~~~~~~L~----I~~~~~~D~G~Y~ 79 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPS-TKYIFEHKGCQRILF----INNCQMTDDSEYY 79 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCB-TTEEEEEETTEEEEE----EEEECTTTCCEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCC-CCEEEEecCCEEEEE----EcCCCcCcCEEEE
Confidence 57888887776 6889999999999998 799999999999888653 2222322222 244 4455999999999
Q ss_pred EEEEeCCCceeEEEEEEEEccCCC
Q psy18191 207 CVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
|.| |... ..+.|.|..+|.
T Consensus 80 C~a----g~~~-~~~~l~V~~~P~ 98 (100)
T 2yuv_A 80 VTA----GDEK-CSTELFVRSGPS 98 (100)
T ss_dssp EEE----TTEE-EEEEEEECCSCC
T ss_pred EEE----CCce-EEEEEEEecCCC
Confidence 999 7775 489999988763
No 171
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.50 E-value=1.4e-13 Score=113.48 Aligned_cols=146 Identities=12% Similarity=0.139 Sum_probs=87.7
Q ss_pred CCccEEEecccccccc-----------------------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCc
Q psy18191 62 PKPICLRFQDLLPQSK-----------------------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSL 118 (238)
Q Consensus 62 ~~~~~~w~~~~~~~~~-----------------------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~ 118 (238)
|.+.+.||+++.+... .+...|.+.++..+|+|.|+|.+.+. .|..... .....
T Consensus 32 p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~~~~~~-~~~~~ 108 (327)
T 2wng_A 32 PVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRK--GSPDTEF-KSGAG 108 (327)
T ss_dssp SCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEES--STTCEEE-EECCC
T ss_pred CCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecC--CCcceeE-eecCc
Confidence 5678999998753210 11235778888888999999776553 1211110 00011
Q ss_pred ceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC--EEEEEeCCEEeeccCCccEEEe--cCCcEEE--EE
Q psy18191 119 PLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEP--RIEWYKDGSLVSAEIGSHRILL--PAGSLFF--LS 192 (238)
Q Consensus 119 ~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~--~~~~l~~--~~ 192 (238)
..+. +.....+|.+. .+ ...+.+|+.+.|.|.+.|.|+| .+.|+++|..+... ...... .++.+.+ .+
T Consensus 109 ~~l~--V~~~p~~p~i~-~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~--~~~~~~~~~~~~~~~~s~L 182 (327)
T 2wng_A 109 TELS--VRAKPSAPVVS-GP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDF--QTNVDPVGESVSYSIHSTA 182 (327)
T ss_dssp EEEE--EEBCCCCCEEE-CC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCE--EEEEECSSCCSCEEEEEEE
T ss_pred EEEE--EEecCCCceee-cc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccc--ccccccccCCCceEEEEEE
Confidence 1111 11122344554 33 3667899999999999999876 89999999988743 111111 2233332 22
Q ss_pred eecCCCCCCCeEEEEEEEeCCCce
Q psy18191 193 LVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 193 vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
.|.....+|.|.|+|.|.|..|..
T Consensus 183 ~i~~~~~d~~g~Y~C~a~n~~~~~ 206 (327)
T 2wng_A 183 KVVLTREDVHSQVICEVAHVTLQG 206 (327)
T ss_dssp EEECCTTGGGCEEEEEEECTTSCS
T ss_pred EEechhcCcCceEEEEEeccccCC
Confidence 244556666899999999998763
No 172
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.50 E-value=2.1e-13 Score=108.74 Aligned_cols=145 Identities=12% Similarity=0.175 Sum_probs=84.9
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceec------------CCccCCEEEeCCCceEEeCCCcE
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHG------------DGYRVPRITEHPASAVVPRHEPT 149 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~------------~v~~~P~i~~~~~~~~~~~G~~~ 149 (238)
.|.|.++.++|+|.|.|.+.+....+.. .... ...+. +.. ....+|.+...|....+.+|+++
T Consensus 82 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~--~~~~--~~~L~-V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v 156 (256)
T 3umt_A 82 YLELRSLTSEDSAVYYCARDDRYPAWFA--YWGQ--GTTVT-VSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERV 156 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCSTTCCSC--EECC--CEEEE-ECC---------------CCCCEEEECSEEEECTTCCE
T ss_pred EEEECCCCcccCEEEEEEEccCCCcccc--EECC--CEEEE-EcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCE
Confidence 4788888899999999776653110000 0000 00111 000 00126777777888999999999
Q ss_pred EEEEEEeeeCCCEEEEEeC--CEEee---cc-------CCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 150 TLNCKADGYPEPRIEWYKD--GSLVS---AE-------IGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 150 ~L~C~~~g~P~p~i~W~~~--g~~l~---~~-------~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
.|.|.+.+.|.|.+.|+++ +..+. .. ...+......+.. ..+.|..++.+|+|.|.|.|.|..+...
T Consensus 157 ~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~~~~~~~~f 235 (256)
T 3umt_A 157 SITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSD-YSLTISSLESEDFVDYYCLQYASSPPTF 235 (256)
T ss_dssp EEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTE-EEEEECSCCGGGCSEEEEEECSSSSCEE
T ss_pred EEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCE-EEEEECCCChhHCEEEEEEEeeCCCcEE
Confidence 9999999999999999984 22211 00 0111111111221 1123778899999999999999766554
Q ss_pred EEEEEEEEccCCCCC
Q psy18191 218 SKNATLDVAGKISTA 232 (238)
Q Consensus 218 s~~~~L~V~~~~~~~ 232 (238)
.....|.|.+.+...
T Consensus 236 g~gt~L~V~~~~~~~ 250 (256)
T 3umt_A 236 GGGTKLEIKRAAALE 250 (256)
T ss_dssp CCCEEEEEC------
T ss_pred CCCEEEEEECCCccc
Confidence 456788887765443
No 173
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=3.3e-14 Score=100.15 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=69.7
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeee---CCCEEEEEeCCE-EeeccC-CccEEE--ecC--CcEEEEEeecCCCCC
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGY---PEPRIEWYKDGS-LVSAEI-GSHRIL--LPA--GSLFFLSLVHGKKDT 200 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~---P~p~i~W~~~g~-~l~~~~-~~~~~~--~~~--~~l~~~~vi~~v~~~ 200 (238)
..+.|...|.++.+.+|+++.|.|.+.|. |.|.|.|+|+.. .+.... ....+. ... ......+.|..++..
T Consensus 11 ~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 90 (118)
T 2edn_A 11 PTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLG 90 (118)
T ss_dssp CSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTT
T ss_pred CcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChh
Confidence 34567777889999999999999999875 789999999742 111110 111111 111 111233348888999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|+|.|+|.|.|..|... ..+.|.|..+
T Consensus 91 D~G~Y~Cevsn~~g~~s-~~~~L~V~~~ 117 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDS-CGFNIDVEAP 117 (118)
T ss_dssp TCSCEEEEEECSSCEEE-EEECCEEECC
T ss_pred hCEEEEEEEEEcCCcEE-EEEEEEEEcC
Confidence 99999999999999985 5999999874
No 174
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.50 E-value=2.8e-13 Score=108.25 Aligned_cols=139 Identities=14% Similarity=0.215 Sum_probs=85.7
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCC-ceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGL-PLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYP 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~-y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P 159 (238)
..|.|.++.++|+|.|.|.+.+.. |. +.... ...+.+.+..+|.+...|..+.+.+|+++.|.|.+.+.|
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~n~~--g~~~~~~~-------~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 149 (256)
T 1nqb_A 79 AYMQLSSLTSEDSAVYYCARYDYY--GSSYFDYW-------GQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSI 149 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCTT--SSSSCSEE-------CCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCC
T ss_pred EEEEECcCChhhCEEEEEEEeecc--CccceeEE-------cCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcc
Confidence 357788888888888887776631 21 00000 011112244567777777788899999999999999988
Q ss_pred CC-----EEEEEe--CCEEeec----------cCCccEEE-ecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEE
Q psy18191 160 EP-----RIEWYK--DGSLVSA----------EIGSHRIL-LPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNA 221 (238)
Q Consensus 160 ~p-----~i~W~~--~g~~l~~----------~~~~~~~~-~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~ 221 (238)
.| .+.|+| +|..+.. ....+... ...... .+.|..++.+|+|.|.|.|.|..+.......
T Consensus 150 ~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt 227 (256)
T 1nqb_A 150 VHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDF--TLKISRVEAEDLGVYYCFQGSHVPYTFGGGT 227 (256)
T ss_dssp BCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEE--EEEESSCCGGGCEEEEEEECSSSSCEECCCE
T ss_pred cccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEE--EEEECCCChHHCEEEEEEEccCCceEECCCE
Confidence 76 999999 5654320 00111111 111211 2237888999999999999996544333455
Q ss_pred EEEEccCCC
Q psy18191 222 TLDVAGKIS 230 (238)
Q Consensus 222 ~L~V~~~~~ 230 (238)
.|.|.++..
T Consensus 228 ~l~V~~~~~ 236 (256)
T 1nqb_A 228 KLEIKRAAA 236 (256)
T ss_dssp EEEECC---
T ss_pred EEEEECCCC
Confidence 788865543
No 175
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.50 E-value=4.6e-14 Score=112.88 Aligned_cols=126 Identities=18% Similarity=0.177 Sum_probs=77.5
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEE---eee
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKA---DGY 158 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~---~g~ 158 (238)
.|.+.++..+|+|.|+|.+.+....+ . ....+.+.+ .| ..|....+.+|+.+.|.|.+ .+.
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~--~---------~~~~~~l~V--~~---~~p~~~~v~~G~~v~L~C~~~~~~~~ 148 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESM--V---------MKKPVELWV--LP---EEPRDLRVRVGDTTQMRCSIQSTEEK 148 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCC--E---------EEEEEEEEE--EC---CCCSEEEEETTCCEEECCBCEESSSS
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcc--e---------EEEEEEEEE--ec---cCCCccccccCCcEEEEEEecCCCCC
Confidence 36667777777777776654421111 0 001111101 11 23456788999999999999 677
Q ss_pred CCCEEEEEeC-CEEee------c------------cCC-ccEEE-----ecCCcEEEEEeecCCCCCCCeEEEEEEEeCC
Q psy18191 159 PEPRIEWYKD-GSLVS------A------------EIG-SHRIL-----LPAGSLFFLSLVHGKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 159 P~p~i~W~~~-g~~l~------~------------~~~-~~~~~-----~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~ 213 (238)
|.|.+.|+++ +..+. . ... .+... ...+.|. |..+..+|+|.|+|.|.|..
T Consensus 149 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~----i~~v~~~D~G~Y~C~a~n~~ 224 (268)
T 3mj6_A 149 RVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIK----LQTVKESDQGIYTCSIYVGK 224 (268)
T ss_dssp CCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEE----ECSCCGGGCEEEEEEEEETT
T ss_pred CccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEE----ECcCChhhCeEEEEEEEcCC
Confidence 9999999984 32110 0 000 01111 1234454 66679999999999999999
Q ss_pred CceeEEEEEEEEccC
Q psy18191 214 GFARSKNATLDVAGK 228 (238)
Q Consensus 214 G~~~s~~~~L~V~~~ 228 (238)
|... ..+.|.|...
T Consensus 225 g~~~-~~~~l~V~~~ 238 (268)
T 3mj6_A 225 LESR-KTIVLHVVQD 238 (268)
T ss_dssp EEEE-EEEEEEEECC
T ss_pred ceEE-EEEEEEEEcC
Confidence 9986 5999998443
No 176
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.50 E-value=2.6e-14 Score=110.52 Aligned_cols=126 Identities=12% Similarity=0.171 Sum_probs=78.2
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEee-eC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADG-YP 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g-~P 159 (238)
..|.|.++..+|+|.|+|.+.+.. |. ..... ..+. ......+|.+...+.......|+.+.|.|.+.| .|
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~~~~--~~---~~~~~--~~l~--V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p 141 (213)
T 3d9a_L 71 FTLSINSVETEDFGMYFCQQSNSW--PY---TFGGG--TKLE--IKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYP 141 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSS--SC---EECCC--EEEE--ECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBS
T ss_pred EEEEECCCChhhCEEEEEeeecCC--cc---eeCCC--EEEE--EecCCCCceeEeECCChhhcCCCcEEEEEEEeeecC
Confidence 368888999999999998776632 11 00000 0111 111234787776444433457899999999988 56
Q ss_pred CC-EEEEEeCCEEeeccCCccEE---EecCCcE--EEEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 160 EP-RIEWYKDGSLVSAEIGSHRI---LLPAGSL--FFLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 160 ~p-~i~W~~~g~~l~~~~~~~~~---~~~~~~l--~~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
.| .+.|+++|..+.... .... ...++.. ...+.|..+..+|.|.|+|.|.|.....
T Consensus 142 ~~~~v~W~k~g~~~~~~~-~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 142 KDINVKWKIDGSERQNGV-LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp SCCEEEEEETTEEECTTE-EEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CceEEEEEcCCCcCccee-eecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 65 899999999886420 0101 0122221 1122355668899999999999987665
No 177
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=5.5e-14 Score=97.05 Aligned_cols=95 Identities=17% Similarity=0.204 Sum_probs=70.6
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCC-CEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPE-PRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.|...+.+..+.+|+++.|.|.+.+.|. +.+.|+|+|..+..+ ....+.. ++.... +.|..+..+|+|.|+|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~-~r~~~~~-~~~~~~-L~I~~v~~~D~G~Y~C~ 83 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSS-SRFQATR-QGRKYI-LVVREAAPSDAGEVVFS 83 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBC-SSCEEEE-ETTEEE-EEECSCCTTTCSCEEEE
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCC-CCEEEEE-cCCEEE-EEECCCCHHHCEEEEEE
Confidence 3556777788999999999999999998875 489999999988753 2233332 332221 23788899999999998
Q ss_pred EEeCCCceeEEEEEEEEccCCCCC
Q psy18191 209 ARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
|.| .. ..+.|.|..+|..+
T Consensus 84 a~~----~~-~~a~L~V~~~p~~~ 102 (104)
T 2eny_A 84 VRG----LT-SKASLIVRERSGPS 102 (104)
T ss_dssp ETT----EE-EEECEEEECCCSSC
T ss_pred ECC----ee-EEEEEEEeCCCcCC
Confidence 854 44 48899998877544
No 178
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.50 E-value=1.1e-13 Score=95.53 Aligned_cols=92 Identities=18% Similarity=0.216 Sum_probs=69.1
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..+|.|...+.++.+.+|+++.|.|.+.+.|.| +.|++++..+... ....+.. ++.... +.|..+..+|+|.|+|.
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~-~~~~~~~-~~~~~~-L~I~~v~~~D~G~Y~C~ 81 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPS-KRITISH-VGRFHK-LVIDDVRPEDEGDYTFV 81 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCC-SSCEEEE-ETTEEE-EEESSCCTTTCSCEEEE
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCC-CCEEEEE-eCCEEE-EEECCCCcCCCEEEEEE
Confidence 357889988999999999999999999999888 9999999888653 2223322 332211 23788899999999999
Q ss_pred EEeCCCceeEEEEEEEEcc
Q psy18191 209 ARNELGFARSKNATLDVAG 227 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~ 227 (238)
|.|..+. ..+.|.|..
T Consensus 82 a~n~~~~---~~~~l~V~~ 97 (106)
T 2dlt_A 82 PDGYALS---LSAKLNFLE 97 (106)
T ss_dssp EETSCCC---CCBCEEEEC
T ss_pred EccCCce---EEEEEEEEE
Confidence 9998333 256666654
No 179
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.50 E-value=1.7e-12 Score=100.28 Aligned_cols=99 Identities=30% Similarity=0.446 Sum_probs=77.7
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEe-cCCcEEEEEeecCCCC-CCCeEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILL-PAGSLFFLSLVHGKKD-TDSGVYWC 207 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~~l~~~~vi~~v~~-~d~G~Y~C 207 (238)
.+|.|...|.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+........... .++...+ .|..+.. +|+|.|+|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L--~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISIL--RIEPVRAGRDDAPYEC 82 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEE--EESSCCTTTTCSEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEE--EEEecCCCCcCceEEE
Confidence 689999999999999999999999999999999999999998874322222222 2332222 2677798 99999999
Q ss_pred EEEeCCCceeEEEEEEEEccCCC
Q psy18191 208 VARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
.|.|..|...+..+.|.|...+.
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~~~~ 105 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYEGDK 105 (212)
T ss_dssp EEECSSSCEEEEEEEEEEECTTC
T ss_pred EEEeCCCCeEEeeEEEEEecccC
Confidence 99999999434688999977643
No 180
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.9e-14 Score=98.59 Aligned_cols=92 Identities=16% Similarity=0.171 Sum_probs=69.8
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCC---ccEEEecCCcEEEEEeecCCCCCCCeEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIG---SHRILLPAGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~---~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
.+|.|...+.+..+.+|+++.|.|.+.+.| |.+.|+++|..+..... ...+. .++.... +.|..+..+|+|.|+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~-~~~~~~~-L~I~~~~~~D~G~Y~ 83 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFK-KDGKRHI-LIFSDVVQEDRGRYQ 83 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEE-ECSSEEE-EECSSCCGGGCSBEE
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEE-ECCCEEE-EEECCCChhhCEEEE
Confidence 567888888889999999999999999999 99999999998875421 12333 3333222 237888999999999
Q ss_pred EEEEeCCCceeEEEEEEEEccCC
Q psy18191 207 CVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.|.| .. ..+.|.|.++|
T Consensus 84 C~a~n----~~-~~~~l~V~~~P 101 (101)
T 2edk_A 84 VITNG----GQ-CEAELIVEEKQ 101 (101)
T ss_dssp EECSS----CE-ECCBEEEECCC
T ss_pred EEEcC----Cc-EEEEEEEeCCC
Confidence 99988 22 36778887654
No 181
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.49 E-value=1.3e-12 Score=112.24 Aligned_cols=154 Identities=12% Similarity=0.072 Sum_probs=100.8
Q ss_pred cEEEeccccccccce------EEEEEcCCCCCCCCCceEEEeCCCcc-cCCceEEeCCCCcceecceecCCccCCEEEeC
Q psy18191 65 ICLRFQDLLPQSKQG------LMYLVGSQASPDYPNRFSLCNNKTWQ-KGLPLKKYHPPSLPLFPGVHGDGYRVPRITEH 137 (238)
Q Consensus 65 ~~~w~~~~~~~~~~g------~~~l~~~~~~~~~~g~y~~~~~~~~~-~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~ 137 (238)
.+.||+++..+.... ...|.+..+..+|+|.|+|.+.+... .+...- ........+. +......+|.+..
T Consensus 120 ~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~-~~~s~~~~l~-v~~~~~~~p~~~~- 196 (450)
T 1z7z_I 120 TVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELF-ENTSAPYQLQ-TFVLPATPPQLVS- 196 (450)
T ss_dssp EEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEE-EEECCCEECE-ECCCCSSCCEEEC-
T ss_pred EEEEeeCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEE-eeccCcccee-eeccCCCCCEecC-
Confidence 889999987554321 24677788889999999988776432 111110 0000111111 1110124566543
Q ss_pred CCceEEeCCCcEEEEEEEeee-C--CCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCe--EEEEEEEeC
Q psy18191 138 PASAVVPRHEPTTLNCKADGY-P--EPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSG--VYWCVARNE 212 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~-P--~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G--~Y~C~a~N~ 212 (238)
...+.+|+.+.|.|.+.|. | .+.+.|++++..+.. ......+.+.+...+ .+..+|+| .|+|.|.|.
T Consensus 197 --~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~-----~~~~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~ 268 (450)
T 1z7z_I 197 --PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP-----TVTYGNDSFSAKASV-SVTAEDEGTQRLTCAVILG 268 (450)
T ss_dssp --CSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC-----EEEEETTEEEEEEEE-ECCGGGCEEEEEEEEEEET
T ss_pred --ceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc-----eEEecCCceeEEEEE-EeEhhhCCcEEEEEEEccC
Confidence 2678999999999999998 7 789999999988763 233333444333222 45899999 999999999
Q ss_pred CCceeEEEEEEEEccCCC
Q psy18191 213 LGFARSKNATLDVAGKIS 230 (238)
Q Consensus 213 ~G~~~s~~~~L~V~~~~~ 230 (238)
.|... ..+.|.|...+.
T Consensus 269 ~g~~~-~~~~l~V~~~~~ 285 (450)
T 1z7z_I 269 NQSQE-TLQTVTIYSFPA 285 (450)
T ss_dssp TEEEE-EEEEEEEECCCC
T ss_pred CccEE-EEEEEEEecCCC
Confidence 99986 488999887443
No 182
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.49 E-value=2.3e-13 Score=108.32 Aligned_cols=143 Identities=17% Similarity=0.199 Sum_probs=84.7
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee----------cCCccCCEEEeCCCceEEeCCCcEEE
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH----------GDGYRVPRITEHPASAVVPRHEPTTL 151 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~----------~~v~~~P~i~~~~~~~~~~~G~~~~L 151 (238)
.|.|.++.++|+|.|.|.+.+... ... . ....+.... ..+..+|.+...|....+.+|+++.|
T Consensus 81 ~L~I~~v~~~DsG~Y~C~~~~~~~--~~~---~--~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L 153 (253)
T 3uzq_A 81 YLHLSSLTSGDTAVYYCSRGWEGF--AYW---G--QGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATI 153 (253)
T ss_dssp EEEECSCCGGGCEEEEEEECSSSC--CEE---C--CCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEE
T ss_pred EEEeCCCCcccCEEEEEEEeeCCc--cEE---C--CCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEE
Confidence 478888899999999977765211 100 0 000111000 01223567777778899999999999
Q ss_pred EEEEeeeCCC----EEEEEeC--CEEee---cc-------CCccEEE-ecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 152 NCKADGYPEP----RIEWYKD--GSLVS---AE-------IGSHRIL-LPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 152 ~C~~~g~P~p----~i~W~~~--g~~l~---~~-------~~~~~~~-~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
.|.+.+.|.| .+.|+++ +..+. .. ...+... ...+.. .+.|..++.+|+|.|.|.|.|..+
T Consensus 154 ~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--~L~I~~v~~~DsG~Y~C~~~n~~~ 231 (253)
T 3uzq_A 154 SCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDF--TLTINPVEADDVATYFCQRSNEVP 231 (253)
T ss_dssp EEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEE--EEEESSCCGGGCEEEEEEECSSSS
T ss_pred EEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEE--EEEECCCCHHHCEEEEEEEccCCC
Confidence 9999998887 8999984 22111 00 0011111 112221 223788899999999999999766
Q ss_pred ceeEEEEEEEEccCCCCCC
Q psy18191 215 FARSKNATLDVAGKISTAT 233 (238)
Q Consensus 215 ~~~s~~~~L~V~~~~~~~~ 233 (238)
.....-..|.|.+.+..+.
T Consensus 232 ~~fg~gt~l~v~~~~~~~~ 250 (253)
T 3uzq_A 232 WTFGGGTKLEIKRPLEHHH 250 (253)
T ss_dssp CCBCCCEEEEECCC-----
T ss_pred cEECCCEEEEEcCCCCCcc
Confidence 5544466788887766554
No 183
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.49 E-value=8.3e-14 Score=108.46 Aligned_cols=135 Identities=14% Similarity=0.087 Sum_probs=80.6
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcE-EEEEEEe-eeC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPT-TLNCKAD-GYP 159 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~-~L~C~~~-g~P 159 (238)
.|.+.++..+|+|.|+|...+.. .|. ....+.+.+..+|.+...+.... .+|+.+ .|.|.+. |.|
T Consensus 79 sL~I~~v~~~D~G~Y~C~~~~~~-~~~-----------~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P 145 (221)
T 3eow_R 79 SLRMFGLRVEDEGSYTCLFVTFP-QGS-----------RSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRP 145 (221)
T ss_dssp EEECCCSSCCCCSCBEEEEEESS-SCS-----------CEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSS
T ss_pred eEEEccCChHHCeEEEEEEEeCC-CCc-----------eEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccC
Confidence 46667777777777776544321 111 11222333566888765433333 678888 4999987 899
Q ss_pred CCEEEEEeCCEEeeccCCccEEE-ecCCc--EEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCCCCCC
Q psy18191 160 EPRIEWYKDGSLVSAEIGSHRIL-LPAGS--LFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKISTATDC 235 (238)
Q Consensus 160 ~p~i~W~~~g~~l~~~~~~~~~~-~~~~~--l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~~~~ 235 (238)
.|.++|++++...... .... ..++. ....+.|..+..+|.|.|+|.|.|..+.. .+.+.|...+..+...
T Consensus 146 ~p~v~W~k~~~~~~~~---~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~---~~~~~v~~~~~~~~~~ 218 (221)
T 3eow_R 146 PAQITWHSDLGGMPQT---SQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEK---PQLLTVSLTVYYPHHH 218 (221)
T ss_dssp CCCEEEECSSSCCCCC---EEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSS---CEEEEECCCCCC----
T ss_pred CCeeEEEeCCCCCCcc---ceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCC---CeEEEEEEEEEccccc
Confidence 9999999875433211 1111 11221 11222367778999999999999999876 4456666666655443
No 184
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.48 E-value=2.9e-13 Score=93.34 Aligned_cols=96 Identities=17% Similarity=0.181 Sum_probs=68.3
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCE-EeeccC-----CccEEEe-c-CCcEEEEEeecCCCCCC
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGS-LVSAEI-----GSHRILL-P-AGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~-~l~~~~-----~~~~~~~-~-~~~l~~~~vi~~v~~~d 201 (238)
.+|.+...+.++.+.+|+++.|.|.+.+.|.|.+.|++++. .+.... ..+.... . .+.. .+.|..++.+|
T Consensus 5 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--~L~I~~v~~~D 82 (108)
T 3m45_A 5 GSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHEL--SISVSDVSLSD 82 (108)
T ss_dssp ---CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEE--EEEECSCCGGG
T ss_pred cCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcE--EEEECCCChhH
Confidence 45666667788999999999999999999999999999875 332210 1122211 1 1122 22377889999
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 202 SGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
+|.|+|.|.| .|... ..+.|.|..+|
T Consensus 83 ~G~Y~C~~~n-~~~~~-~~~~L~V~~~P 108 (108)
T 3m45_A 83 EGQYTCSLFT-MPVKT-SKAYLTVLGVP 108 (108)
T ss_dssp CEEEEEEECS-SSCEE-EEEEEEEECCC
T ss_pred CeEEEEEEEc-CCCcE-EEEEEEEEcCC
Confidence 9999999999 88875 59999998754
No 185
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.9e-14 Score=97.64 Aligned_cols=86 Identities=24% Similarity=0.458 Sum_probs=68.3
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.+...|....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.|. |..+..+|+|.|+|.|
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~--------~~~~L~----i~~v~~~d~G~Y~C~a 76 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP--------PSPVLI----LPEIGPQDQGTYSCVA 76 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC--------CCSEEE----EESCCTTTCEEEECEE
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC--------CCCEEE----ECCCCcccCEEEEEEE
Confidence 5677878888889999999999999999999999999999877642 234455 5566999999999999
Q ss_pred EeCCCc-eeEEEEEEEEcc
Q psy18191 210 RNELGF-ARSKNATLDVAG 227 (238)
Q Consensus 210 ~N~~G~-~~s~~~~L~V~~ 227 (238)
.|..|. ..+..+.|.|.+
T Consensus 77 ~n~~~~~~~s~~~~v~V~~ 95 (96)
T 2ens_A 77 THSSHGPQESRAVSISIIE 95 (96)
T ss_dssp CCSSCCCEECCCEEEEECC
T ss_pred EeCCCCcEEEEEEEEEEeC
Confidence 996544 334567777754
No 186
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.48 E-value=9e-13 Score=100.86 Aligned_cols=110 Identities=14% Similarity=0.134 Sum_probs=66.0
Q ss_pred EEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc---CCEEEeCCCceEEeCCC-cEEEEEEEeee
Q psy18191 83 LVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR---VPRITEHPASAVVPRHE-PTTLNCKADGY 158 (238)
Q Consensus 83 l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~---~P~i~~~~~~~~~~~G~-~~~L~C~~~g~ 158 (238)
|.|.++...|+|.|.|...+.. | .....+.+.|.. +|.+...+ .....|. .+.|.|.+.|.
T Consensus 72 L~I~~v~~~D~G~Y~C~~~~~~--~-----------~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~ 136 (193)
T 2if7_A 72 LQLSNLKMEDTGSYRAQISTKT--S-----------AKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDA 136 (193)
T ss_dssp EEECSCCGGGCEEEEEEEECSS--C-----------EEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESC
T ss_pred EEECCCCcccCceEEEEEEecC--C-----------CeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecC
Confidence 5666777777777776654421 1 111111111222 34554433 2233465 89999999985
Q ss_pred -CCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCC-CCCeEEEEEEEeCCCceeEEEEE
Q psy18191 159 -PEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKD-TDSGVYWCVARNELGFARSKNAT 222 (238)
Q Consensus 159 -P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~-~d~G~Y~C~a~N~~G~~~s~~~~ 222 (238)
|.|.+.|+++|..+.. ++.|.+... .. .|+|.|+|.|.|.+|... ..+.
T Consensus 137 ~p~p~i~W~~~g~~l~~----------~~~l~i~~~----~~~~d~G~Y~C~a~N~~g~~s-~~~~ 187 (193)
T 2if7_A 137 DDNVSFRWEALGNTLSS----------QPNLTVSWD----PRISSEQDYTCIAENAVSNLS-FSVS 187 (193)
T ss_dssp CTTCEEEEEETTEEEES----------SSEEEEEEC----TTTCSCCEEEEEEEETTEEEE-EEEE
T ss_pred CCceEEEEEeCCEEcCC----------CCeEEEEec----cCcCCCCcEEEEEECCCCccc-cccc
Confidence 5899999999987642 233444322 33 489999999999999884 3443
No 187
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.48 E-value=7.4e-13 Score=102.44 Aligned_cols=98 Identities=29% Similarity=0.419 Sum_probs=76.0
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCC-CCCCCeEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGK-KDTDSGVYW 206 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v-~~~d~G~Y~ 206 (238)
+..+|.|...|.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... ........++.... +.|..+ +.+|+|.|+
T Consensus 3 ~~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~-L~i~~v~~~~d~G~Y~ 80 (212)
T 2yd6_A 3 GETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQ-RFEVIEFDDGSGSV-LRIQPLRTPRDEAIYE 80 (212)
T ss_dssp -CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCT-TEEEEEEGGGTEEE-EEECSCCTTTTCEEEE
T ss_pred CCCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCC-ceeEEEEcCCCceE-EEEeccCCCCCCeEEE
Confidence 347899999999999999999999999999999999999999988743 11122222222222 236777 489999999
Q ss_pred EEEEeCCCceeEEEEEEEEccC
Q psy18191 207 CVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|.|.|..|... ..+.|.|...
T Consensus 81 C~a~n~~g~~~-~~~~l~V~~~ 101 (212)
T 2yd6_A 81 CVASNNVGEIS-VSTRLTVLRE 101 (212)
T ss_dssp EEEEETTEEEE-EEEEEEEECG
T ss_pred EEEEcCCCcEE-EEEEEEEecc
Confidence 99999999985 5889999765
No 188
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.48 E-value=1.4e-14 Score=119.83 Aligned_cols=152 Identities=14% Similarity=0.137 Sum_probs=98.8
Q ss_pred cCCCccEEEeccccc--cccc---eE----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc
Q psy18191 60 FYPKPICLRFQDLLP--QSKQ---GL----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR 130 (238)
Q Consensus 60 ~~~~~~~~w~~~~~~--~~~~---g~----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~ 130 (238)
..+.+.+.|++++.. .... .+ ..|.+.++...|+|.|+|.+.+.. |..... +.+.+..
T Consensus 51 ~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~--g~~~~~-----------~~l~V~~ 117 (339)
T 3o4o_C 51 VSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNAS--YCDKMS-----------IELRVFE 117 (339)
T ss_dssp TSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEECCEEETT--EEEEEE-----------EEEEEEC
T ss_pred CCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEEEEECCc--ceEEEE-----------EEEEEEc
Confidence 356778999998874 3221 11 257788899999999998766532 211111 1111222
Q ss_pred CCEEE--eCCCceEEeCCCcEEEEEE-----EeeeCCCEEEEEeCCEEeeccCCccEEEecC-CcEEEEEeecCCCCCCC
Q psy18191 131 VPRIT--EHPASAVVPRHEPTTLNCK-----ADGYPEPRIEWYKDGSLVSAEIGSHRILLPA-GSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 131 ~P~i~--~~~~~~~~~~G~~~~L~C~-----~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~-~~l~~~~vi~~v~~~d~ 202 (238)
+|... .......+.+|+.+.|.|. +.|.|.|.+.|+++|..+... ........+ +.|. |..+..+|+
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~-~~~~~~~~~~~~L~----i~~v~~~d~ 192 (339)
T 3o4o_C 118 NTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKD-NEKFLSVRGTTHLL----VHDVALEDA 192 (339)
T ss_dssp SCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTT-CSSEEECTTSSEEE----ESSCCGGGC
T ss_pred CCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCC-CceeEEcCCcceEE----EcccCHhhC
Confidence 22210 1112346789999999999 889999999999999888753 222332222 3454 566699999
Q ss_pred eEEEEEEEeCCCc---eeEEEEEEEEccCC
Q psy18191 203 GVYWCVARNELGF---ARSKNATLDVAGKI 229 (238)
Q Consensus 203 G~Y~C~a~N~~G~---~~s~~~~L~V~~~~ 229 (238)
|.|+|.|.|..|. ..+..+.|.|...+
T Consensus 193 G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~ 222 (339)
T 3o4o_C 193 GYYRCVLTFAHEGQQYNITRSIELRIKKKK 222 (339)
T ss_dssp EEEEEEEECCBTTBCCEEEEEEEEEEECCC
T ss_pred eEEEEEEEECCCCeEEEEEEEEEEEEEcCC
Confidence 9999999999884 22358888887543
No 189
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.48 E-value=5e-13 Score=106.18 Aligned_cols=137 Identities=13% Similarity=0.099 Sum_probs=98.8
Q ss_pred cEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEe
Q psy18191 65 ICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVP 144 (238)
Q Consensus 65 ~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~ 144 (238)
.+.|++++..+...+ ..|.+.++..+|+|.|+|.+.+... ..... +.+..+|.+. .+....+.
T Consensus 33 ~~~W~~~g~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~----------s~~~~-----l~v~~~~~~~-~~~~~~~~ 95 (262)
T 3rjd_A 33 STQWFLNGTATQTST-PSYRITSASVNDSGEYRCQRGLSGR----------SDPIQ-----LEIHRGWLLL-QVSSRVFT 95 (262)
T ss_dssp CEEEEETTEECSCCS-SEEEESSCCGGGCEEEEEEESSSCC----------CCCEE-----EEEECSSEEE-EESCSEEE
T ss_pred eEEEEECCEEeeccC-CeEEEecCCcccCeEEEEEEecCCc----------cccEE-----EEEeccceEe-cCCCeEEe
Confidence 899999998665432 2456788899999999987765321 01111 1123444433 34557788
Q ss_pred CCCcEEEEEEE-eeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEE
Q psy18191 145 RHEPTTLNCKA-DGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATL 223 (238)
Q Consensus 145 ~G~~~~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L 223 (238)
+|+.+.|.|.+ .+.|.+.+.|++++..+... ...+.|. |..+..+|+|.|+|.|.|..|... ..+.|
T Consensus 96 ~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-------~~~~~l~----i~~~~~~d~G~Y~C~~~n~~~~~~-~~~~l 163 (262)
T 3rjd_A 96 EGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-------HWNSNLT----ILKTNISHNGTYHCSGMGKHRYTS-AGISV 163 (262)
T ss_dssp TTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-------EECCCEE----ESSCCGGGCEEEEEEEESSSEEEE-ECEEE
T ss_pred cCCeEEEEEEccCCCCCceEEEEECCcccccc-------CCCCeEE----EEECChhhCEEEEEEEeCCCCccc-cceEE
Confidence 99999999999 78888999999999887632 2245555 566699999999999999998775 58899
Q ss_pred EEccCCC
Q psy18191 224 DVAGKIS 230 (238)
Q Consensus 224 ~V~~~~~ 230 (238)
.|...+.
T Consensus 164 ~V~~~~~ 170 (262)
T 3rjd_A 164 TVKELFP 170 (262)
T ss_dssp EEECSSC
T ss_pred EeccCCC
Confidence 9986543
No 190
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.48 E-value=5.2e-14 Score=108.76 Aligned_cols=130 Identities=15% Similarity=0.095 Sum_probs=80.0
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeC-
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYP- 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P- 159 (238)
..|.|.++.++|+|.|+|.+.+.. |. . .. .....+. +......+|.+...+....+.+|+.+.|.|.+.|.+
T Consensus 68 ~~L~I~~v~~~D~G~Y~C~~~~~~--~~-~-~~--~~~~~l~-V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p 140 (211)
T 3tv3_L 68 ASLTVSGLQTDDEAVYYCGSLVGN--WD-V-IF--GGGTKLT-VLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYP 140 (211)
T ss_dssp EEEEEESCCGGGCEEEEEEEEETT--TE-E-EE--CCCEEEE-ECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBS
T ss_pred EEEEECCCChhHCEEEEEEEecCC--Cc-e-eE--CCCceEE-EeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecC
Confidence 357788888889999987765531 10 0 00 0111111 111123678887766555555799999999999863
Q ss_pred -CCEEEEEeCCEEeeccCC-ccEEEecCCcEEEE--EeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 160 -EPRIEWYKDGSLVSAEIG-SHRILLPAGSLFFL--SLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 160 -~p~i~W~~~g~~l~~~~~-~~~~~~~~~~l~~~--~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
.+.+.|+++|..+..... .......++..... +.|..+..+|.|.|+|.|.|..|...
T Consensus 141 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~ 202 (211)
T 3tv3_L 141 GAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 202 (211)
T ss_dssp SCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEE
T ss_pred CCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEE
Confidence 588999999998864200 11112233433221 22444466789999999999987764
No 191
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.48 E-value=1.5e-12 Score=90.81 Aligned_cols=93 Identities=22% Similarity=0.327 Sum_probs=70.3
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.||.|...+.+..+.+|+++.|.|.+.+. |.+.|++++..+... .+.....++... .+.|..+..+|+|.|+|.|
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~--~~~~~~~~~~~~-~L~I~~v~~~D~G~Y~C~a 92 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDG--DRHSLRQDGARC-ELQIRGLVAEDAGEYLCMC 92 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCS--SSEEEEEETTEE-EEEECSCCSTTCEEEEEEE
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCC--CcEEEEECCCEE-EEEECCCChhhCEEEEEEe
Confidence 45688888888999999999999999774 789999999888643 222223334221 1236788999999999999
Q ss_pred EeCCCceeEEEEEEEEccCCCCC
Q psy18191 210 RNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
|... ..+.|.|..+|...
T Consensus 93 ----~~~~-~~~~l~V~~~p~~~ 110 (113)
T 2edh_A 93 ----GKER-TSAMLTVRAMPSGP 110 (113)
T ss_dssp ----TTEE-EEEEEEECCCCCSS
T ss_pred ----CCCC-EEEEEEEeCCCCCc
Confidence 6665 58999998877554
No 192
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.48 E-value=7.3e-13 Score=100.59 Aligned_cols=99 Identities=24% Similarity=0.401 Sum_probs=77.2
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
+..+|.+...+.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+... .......++.... ..|..+..+|+|.|+|
T Consensus 4 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~-L~i~~~~~~d~G~Y~C 80 (197)
T 3lcy_A 4 SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQS--RKYKMSSDGRTHT-LTVMTEEQEDEGVYTC 80 (197)
T ss_dssp CCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCC--SSEEEEESSSEEE-EEEECCSGGGCEEEEE
T ss_pred cCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCC--ccEEEEeCCCEEE-EEEecCCccCCEEEEE
Confidence 346899999899999999999999999999999999999999988643 2222233332111 1256679999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCCC
Q psy18191 208 VARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
.|.|..|... ..+.|.|...+.
T Consensus 81 ~~~n~~~~~~-~~~~l~v~~~p~ 102 (197)
T 3lcy_A 81 IATNEVGEVE-TSSKLLLQATPQ 102 (197)
T ss_dssp EEECSSCEEE-EEEEEEEEEEEE
T ss_pred EEECCCCcee-EEEEEEEEcCCC
Confidence 9999999986 488888866543
No 193
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=2.7e-13 Score=93.04 Aligned_cols=95 Identities=22% Similarity=0.293 Sum_probs=72.9
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.|...+.++.+.+|+++.|.|. .+.|.|.+.|++++..+... .......++.... +.|..+..+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~--~~~~~~~~~~~~~-L~I~~v~~~D~G~Y~C~- 81 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRAS--GKHQPSQEGLTLR-LTISALEKADSDTYTCD- 81 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSS--SSEEEEEETTEEE-EEEESCCTTTCSEEEEE-
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCC--CeEEEEeCCCEEE-EEECCCCcccCEEEEEE-
Confidence 5677877788899999999999999 58899999999999888753 2222223342111 12677799999999998
Q ss_pred EeCCCceeEEEEEEEEccCCCCCC
Q psy18191 210 RNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
.|... ..+.|.|...+.+|.
T Consensus 82 ---~g~~~-~~~~l~V~~~p~~p~ 101 (103)
T 2dku_A 82 ---IGQAQ-SRAQLLVQGRRSGPS 101 (103)
T ss_dssp ---CSSCB-CCEEEEEECSCCCCS
T ss_pred ---eCCce-EEEEEEEeCccCCCC
Confidence 77776 489999999887765
No 194
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.48 E-value=9e-13 Score=100.38 Aligned_cols=97 Identities=28% Similarity=0.402 Sum_probs=77.2
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEe-cCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILL-PAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.|...+.+..+.+|+++.|.|.+.|.|.|.+.|++++..+........... .++...+ .|..+..+|+|.|+|.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L--~i~~~~~~d~G~Y~C~ 80 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQL--IIASVTDDDATVYQVR 80 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEE--EECSCCGGGCSEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEE--EECcCCHHhCEEEEEE
Confidence 579999888999999999999999999999999999999998875422333332 2332222 2677899999999999
Q ss_pred EEeCCCceeEEEEEEEEccCC
Q psy18191 209 ARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.|..|... ..+.|.|..++
T Consensus 81 ~~n~~g~~~-~~~~l~V~~~p 100 (197)
T 2j8h_A 81 ATNQGGSVS-GTASLEVEVPA 100 (197)
T ss_dssp EEETTEEEE-EEEEEEEEEEE
T ss_pred EEECCCcee-EEEEEEEcCCC
Confidence 999999985 58888886654
No 195
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.4e-13 Score=96.66 Aligned_cols=91 Identities=23% Similarity=0.273 Sum_probs=70.3
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCC---cEEEEEeecCCCCCCCeEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAG---SLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~---~l~~~~vi~~v~~~d~G~Y~C 207 (238)
++.|...+.++.+.+|+++.|.|.+.|.|.|.+.|+++|..+..+ ....+...++ .|. |..+..+|+|.|+|
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~-~~~~~~~~~~~~~~L~----I~~v~~~D~G~Y~C 87 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHAN-ELNEIDAQPGGYHVLT----LRQLALKDSGTIYF 87 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCS-SSCCBCCBTTTBCCBE----ECSCCTTTCEEEEE
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCC-CcEEEEEcCCCEEEEE----EcCCChhhCEEEEE
Confidence 347888888999999999999999999999999999999988753 1112211222 343 67779999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCCCC
Q psy18191 208 VARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
. +|... ..+.|.|..++..
T Consensus 88 ~----~g~~~-~~~~L~V~~~p~~ 106 (115)
T 2cr6_A 88 E----AGDQR-ASAALRVTEKPSV 106 (115)
T ss_dssp E----ETTEE-CCEEEEEECCSSC
T ss_pred E----ECCee-EEEEEEEECCCce
Confidence 9 56775 4889999887654
No 196
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.47 E-value=3.9e-13 Score=90.96 Aligned_cols=87 Identities=22% Similarity=0.349 Sum_probs=66.0
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
.|.|...+.++.+.+|+++.|.|.+ +.|.|.+.|++++..+..+ ....+. .++.... +.|..+..+|+|.|+|.|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~-~~~~~~-~~~~~~~-L~I~~v~~~D~G~Y~C~a- 82 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISAS-NKYGLA-TEGTRHT-LTVREVGPADQGSYAVIA- 82 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSS-TTCEEE-EETTEEE-EEESSCCTTCCSEEEEEE-
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCC-CcEEEE-EcCCEEE-EEEcCCCcccCEEEEEEE-
Confidence 4666677788999999999999999 8899999999999988753 222332 2333222 237888999999999999
Q ss_pred eCCCceeEEEEEEEEc
Q psy18191 211 NELGFARSKNATLDVA 226 (238)
Q Consensus 211 N~~G~~~s~~~~L~V~ 226 (238)
|... ..+.|.|.
T Consensus 83 ---g~~~-~~~~l~V~ 94 (95)
T 2k1m_A 83 ---GSSK-VKFDLKVI 94 (95)
T ss_dssp ---TTEE-EEEEEEEE
T ss_pred ---CCce-EEEEEEEe
Confidence 6665 47888885
No 197
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.47 E-value=4.9e-13 Score=114.27 Aligned_cols=153 Identities=12% Similarity=0.162 Sum_probs=86.9
Q ss_pred CCCc-cEEEeccccccccce----------------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecc
Q psy18191 61 YPKP-ICLRFQDLLPQSKQG----------------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPG 123 (238)
Q Consensus 61 ~~~~-~~~w~~~~~~~~~~g----------------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~ 123 (238)
.|.+ .+.|++++.++.... ...|.+..+..+|+|.|+|.+.+... .. .....
T Consensus 144 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~--~~--------~~~~~- 212 (438)
T 1qgc_4 144 YPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS--TS--------PIVKS- 212 (438)
T ss_dssp BSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC--SS--------CEEEE-
T ss_pred cCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEeccc--CC--------ceecc-
Confidence 3455 799999887554331 12455556666667777766554211 10 00111
Q ss_pred eecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeC--CCEEEEEeC--CEEeec---------------cCCccEEEe-
Q psy18191 124 VHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYP--EPRIEWYKD--GSLVSA---------------EIGSHRILL- 183 (238)
Q Consensus 124 ~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~--g~~l~~---------------~~~~~~~~~- 183 (238)
+.. ...++. ...+....+.+|+++.|.|.+.|.| .+.+.|+++ +..+.. ....+....
T Consensus 213 ~~~-~~~~~~-~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 290 (438)
T 1qgc_4 213 FNR-NECEVM-LVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISR 290 (438)
T ss_dssp EET-TC-CCE-EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEE
T ss_pred ccc-ccceeE-EecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEe
Confidence 111 112233 3345677899999999999999988 679999996 543321 001121111
Q ss_pred cCCcEEEEEeecCCCCCCCeEEEEEEEeCCC-----ceeEEEEEEEEcc
Q psy18191 184 PAGSLFFLSLVHGKKDTDSGVYWCVARNELG-----FARSKNATLDVAG 227 (238)
Q Consensus 184 ~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G-----~~~s~~~~L~V~~ 227 (238)
........+.|..++.+|+|.|+|.|.|..| ... ..+.|.|..
T Consensus 291 ~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~-~~~~l~V~~ 338 (438)
T 1qgc_4 291 DNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWG-QGTVVTVSA 338 (438)
T ss_dssp ETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBC-CCEEEEECS
T ss_pred ecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeC-CCEEEEEec
Confidence 1111111223788899999999999999544 221 245677764
No 198
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.47 E-value=1.6e-13 Score=106.01 Aligned_cols=125 Identities=10% Similarity=0.111 Sum_probs=76.5
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~ 160 (238)
.|.|.++..+|+|.|.|.+.+.. |... . ....+. ......+|.+...+....+..|+.+.|.|.+.|. |.
T Consensus 71 ~L~I~~v~~~D~G~Y~C~~~~~~--~~~~----~-~~~~l~--V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~ 141 (210)
T 1lk3_L 71 TLTIDPVEADDTAIYFCQQSWNG--PLTF----G-AGTKLE--LKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPR 141 (210)
T ss_dssp EEEESSCCGGGCEEEEEEECSSS--SCEE----C-CCEEEE--ECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSS
T ss_pred EEEECCCCHHHCeEEEEEEEcCC--Ccee----C-CCEEEE--EcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCC
Confidence 68888899999999998776532 1100 0 000111 1112246777765443334589999999999875 55
Q ss_pred C-EEEEEeCCEEeeccCCccEE---EecCCcEE--EEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 161 P-RIEWYKDGSLVSAEIGSHRI---LLPAGSLF--FLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~~~~~~~---~~~~~~l~--~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
| .+.|+++|..+.... .... ...++... ..+.|..+..+|+|.|+|.|.|.....
T Consensus 142 ~~~v~W~k~g~~~~~~~-~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 142 DISVKWKIDGTERRDGV-LDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CCEEEEEETTEECCTTE-EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred ceEEEEEeCCccCCCCc-eEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 4 899999999876420 0110 11233321 122255568899999999999987644
No 199
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.46 E-value=2.8e-13 Score=104.68 Aligned_cols=127 Identities=12% Similarity=0.108 Sum_probs=79.3
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPE 160 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~ 160 (238)
..|.|.++..+|+|.|+|.+.+.. |. .... ...+. ......+|.+...+.......|+.+.|.|.+.|.|+
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~~~~--~~---~~~~--~~~l~--V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p 141 (213)
T 3r06_A 71 SSFTISSLESEDIGSYYCQQYYNY--PW---TFGP--GTKLE--IKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYP 141 (213)
T ss_dssp EEEEESSCCGGGCSEEEEEECSSS--SC---EECC--CEEEE--ECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred EEEEECCCCcccCEEEEEecccCC--ce---EEcC--CceEE--EeccCCCceeeeeCCCceecCCCCcEEEEEEeeecC
Confidence 368888999999999998776532 10 0000 01111 122357888877666666667888999999998765
Q ss_pred C--EEEEEeCCEEeeccCCccE--EEecCCcEEEE--EeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 161 P--RIEWYKDGSLVSAEIGSHR--ILLPAGSLFFL--SLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 161 p--~i~W~~~g~~l~~~~~~~~--~~~~~~~l~~~--~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
| .+.|+++|..+........ ....++.+.+. ..|..+..+|.|.|+|.|.|.....
T Consensus 142 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 142 KDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp SCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred CceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 3 8999999998864200001 11123433322 2244446678999999999987543
No 200
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.46 E-value=9.7e-14 Score=107.60 Aligned_cols=133 Identities=14% Similarity=0.173 Sum_probs=76.0
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEee-eC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADG-YP 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g-~P 159 (238)
..|.|.++..+|+|.|.|.+.+.. |....... .....+. +......+|.+...+.......|+.+.|.|.+.| .|
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~~-~~~~~l~-V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p 150 (218)
T 3s96_B 75 RYLSISNIQPEDEAIYICGVGDTI--KEQFVYVF-GGGTKVT-VLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSP 150 (218)
T ss_dssp EEEEESSCCGGGCEEEEEEEEEEE--TTEEEEEE-CCCEEEE-EESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBS
T ss_pred EEEEEccCCcccCEEEEEEEecCC--CCceeEEE-cCcEEEE-EecCCCCCceEEeeCCCcccccCCcEEEEEEECcccC
Confidence 347888899999999997765521 10000000 0111111 1111236777776544455556789999999988 57
Q ss_pred CC-EEEEEeCCEEeeccCCccEEEecCCcEEEE--EeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 160 EP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFL--SLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 160 ~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~--~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
.| .+.|+++|..+............++.+.+. ..|..+..+|.|.|+|.|.|..|...
T Consensus 151 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 211 (218)
T 3s96_B 151 SGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVE 211 (218)
T ss_dssp SCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEE
T ss_pred CCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccc
Confidence 77 899999999886421111111124444331 12444466679999999999987764
No 201
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.46 E-value=6.4e-13 Score=100.85 Aligned_cols=95 Identities=26% Similarity=0.433 Sum_probs=76.5
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCC-ccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIG-SHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.|...+.+..+.+|+++.|.|.+.|.|.|.+.|+++|..+..... .......++...+. |..++.+|+|.|+|.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~--i~~~~~~d~G~Y~C~ 81 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLT--IPAVTKANSGRYSLK 81 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEE--ESSCCGGGCEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEE--ECCCCcccCEEEEEE
Confidence 578898888899999999999999999999999999999988875421 23333444433332 678899999999999
Q ss_pred EEeCCCceeEEEEEEEEcc
Q psy18191 209 ARNELGFARSKNATLDVAG 227 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~ 227 (238)
|.|..|... ..+.|.|..
T Consensus 82 ~~n~~~~~~-~~~~l~v~~ 99 (194)
T 2a38_A 82 ATNGSGQAT-STAELLVKA 99 (194)
T ss_dssp EEETTEEEE-EEEEEEEEC
T ss_pred EEcCCceEe-EEEEEEEcc
Confidence 999999886 488888874
No 202
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.46 E-value=7.4e-13 Score=104.10 Aligned_cols=127 Identities=17% Similarity=0.213 Sum_probs=73.3
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc--------cCCEEEeCCCceEEeCCCcEEEEE
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY--------RVPRITEHPASAVVPRHEPTTLNC 153 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~--------~~P~i~~~~~~~~~~~G~~~~L~C 153 (238)
.|.|.++.++|+|.|.|.+.+..... ..-... ....+. +..... ..+.+...|..+.+.+|+++.|.|
T Consensus 74 ~L~I~~v~~~DsG~Y~C~~~~~~g~~-~~~~~~--~~~~l~-V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C 149 (238)
T 2p1y_A 74 SLILELATPSQTSVYFCASGDLGQTN-ERLFFG--HGTKLS-VLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNC 149 (238)
T ss_dssp EEEESSCCGGGCEEEEEEEEC-------CEEEC--CCEEEE-EECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEE
T ss_pred EEEEecCCcccCeeEEEEEEeCCCcc-ccceeC--CCeEEE-EeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEE
Confidence 57788888889999987766531100 000000 001111 100000 012556667778899999999999
Q ss_pred EEeeeCCCEEEEEeCC-----EEeecc-C------CccEEEe--cCCcEEEEEeecCCCCCCCeEEEEEEEeCC
Q psy18191 154 KADGYPEPRIEWYKDG-----SLVSAE-I------GSHRILL--PAGSLFFLSLVHGKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 154 ~~~g~P~p~i~W~~~g-----~~l~~~-~------~~~~~~~--~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~ 213 (238)
.+.|.|.|.+.|++++ ..+... . ..+.... ..+.. ..+.|..+..+|+|.|+|.|.|..
T Consensus 150 ~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 150 SYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKK-LSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp ECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTE-EEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCe-EEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9999999999999964 111100 0 0111111 11111 123478889999999999999983
No 203
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.46 E-value=6.7e-13 Score=105.09 Aligned_cols=129 Identities=18% Similarity=0.145 Sum_probs=73.6
Q ss_pred EEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEee-eCCC
Q psy18191 83 LVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADG-YPEP 161 (238)
Q Consensus 83 l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g-~P~p 161 (238)
|.|.++..+|+|.|+|...+.. | .....+.+.+..+|.+...+.. ....|+.+.|.|.+.| .|.|
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~--~-----------~~~~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~p 149 (248)
T 3pv7_A 84 LRLPGIQLEEAGEYRCEVVVTP--L-----------KAQGTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEA 149 (248)
T ss_dssp EEESSCCGGGCEEEEEEEEETT--E-----------EEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSC
T ss_pred EEeCCCCHHHCeEEEEEEEeCC--c-----------cceeEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCC
Confidence 7777888888888887654421 1 1111222335568888766553 3456778889999998 7999
Q ss_pred -EEEEEeCCEEeecc----CC---ccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCce-eEEEEEEEE
Q psy18191 162 -RIEWYKDGSLVSAE----IG---SHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFA-RSKNATLDV 225 (238)
Q Consensus 162 -~i~W~~~g~~l~~~----~~---~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~-~s~~~~L~V 225 (238)
.+.|+++|..+... .. .......++...+ ...|..+..+|.|.|+|.|.|..+.. .+..+.|.|
T Consensus 150 i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 150 INITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred eEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 99999998643211 00 0111223344332 22355667888999999999998863 234777777
No 204
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.46 E-value=7.3e-13 Score=95.75 Aligned_cols=89 Identities=20% Similarity=0.255 Sum_probs=63.7
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccC--------CccEEEe--cCCcEEEEEeecCC
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEI--------GSHRILL--PAGSLFFLSLVHGK 197 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~--------~~~~~~~--~~~~l~~~~vi~~v 197 (238)
...+|.|...|.+..+.+|+++.|.|.+.|.|.|.+.|++++..+.... ....... ........+.|..+
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 4479999999999999999999999999999999999999776543210 0011110 01111122237778
Q ss_pred CCCCCeEEEEEEEeCCCce
Q psy18191 198 KDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G~~ 216 (238)
..+|+|.|+|.|.|..|..
T Consensus 98 ~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 98 VEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CGGGCEEEEEEEECCTTSS
T ss_pred CcccCEEEEEEEEecCCcc
Confidence 9999999999999999986
No 205
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.46 E-value=2e-13 Score=105.46 Aligned_cols=128 Identities=16% Similarity=0.161 Sum_probs=78.6
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPE 160 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~ 160 (238)
..|.+.++..+|+|.|.|.+.+.. |. ..... ..+. +......+|.+...+.......|+.+.|.|.+.|.++
T Consensus 73 ~~L~I~~v~~~D~G~Y~C~~~~~~--~~---~~~~~--~~l~-V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p 144 (212)
T 1q0x_L 73 AALTITGAQTEDEAIYFCALWSNN--KL---VFGGG--TKLT-VLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYP 144 (212)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSS--CE---EECCC--EEEE-ECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred EEEEECCCCccCCEEEEEEEecCc--hh---hcCCC--eEEE-EecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeC
Confidence 367888899999999998776532 10 11011 1111 1111235788876544444457899999999998654
Q ss_pred C--EEEEEeCCEEeeccCCc-cEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 161 P--RIEWYKDGSLVSAEIGS-HRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 161 p--~i~W~~~g~~l~~~~~~-~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
+ .+.|+++|..+...... ......++.... .+.|..+..+|.|.|+|.|.|.....
T Consensus 145 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (212)
T 1q0x_L 145 GVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSS 205 (212)
T ss_dssp SCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEE
T ss_pred CCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcce
Confidence 4 89999999988642100 011122333221 22245557789999999999987654
No 206
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.46 E-value=2.3e-13 Score=105.22 Aligned_cols=143 Identities=15% Similarity=0.143 Sum_probs=84.0
Q ss_pred ccEEEeccccccccc----------e----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 64 PICLRFQDLLPQSKQ----------G----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 64 ~~~~w~~~~~~~~~~----------g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
..+.|++++...... + ...|.+..+..+|+|.|+|.+.+... ..... ..+.. ...+.
T Consensus 37 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~--~~~~~------~~v~~-~~~~~ 107 (207)
T 2vol_A 37 VQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAF--PAPIE------KTISK-TKGRP 107 (207)
T ss_dssp CEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTC--SSCEE------EEECC-CCCCC
T ss_pred eEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCC--CCceE------EEecc-CCCCC
Confidence 479999987643211 1 12466667777778888876665321 10000 01110 01355
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeee-CC-CEEEEEeCCEEeeccCCccEEEecCCcEEEEEe--ecCCCCCCCeEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGY-PE-PRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSL--VHGKKDTDSGVY 205 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~v--i~~v~~~d~G~Y 205 (238)
.+|.+...+.......|+.+.|.|.+.|. |. +.++|+++|..+............+|.+.+... |.....+|.|.|
T Consensus 108 ~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~y 187 (207)
T 2vol_A 108 KAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTF 187 (207)
T ss_dssp BCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEE
T ss_pred cCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEE
Confidence 78888655433323469999999999985 44 389999999987532111112234566554322 222334579999
Q ss_pred EEEEEeCCCc
Q psy18191 206 WCVARNELGF 215 (238)
Q Consensus 206 ~C~a~N~~G~ 215 (238)
+|.|.|....
T Consensus 188 tC~a~n~~l~ 197 (207)
T 2vol_A 188 TCSVLHEGLH 197 (207)
T ss_dssp EEEEECTTSG
T ss_pred EEEEECCCCC
Confidence 9999998754
No 207
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.45 E-value=5.8e-13 Score=103.09 Aligned_cols=100 Identities=52% Similarity=0.976 Sum_probs=81.7
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccC-CccEEEecCCcEEEEEeecCCCCCCCeEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEI-GSHRILLPAGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~-~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
...+|.|...|..+.+.+|+++.|.|.+.|.|.|.+.|+++|..+.... ...+....++.+.+...|..++.+|+|.|+
T Consensus 6 ~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 6 QYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEE
T ss_pred ccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEE
Confidence 3478999999999999999999999999999999999999999887532 134555667777665557888999999999
Q ss_pred EEEEeCCCceeEEEEEEEEcc
Q psy18191 207 CVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~~ 227 (238)
|.|.|..|...+..+.|.|..
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~ 106 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAV 106 (217)
T ss_dssp EEEEETTEEEECCCEEEEECE
T ss_pred EEEecCCCccccccceEEEEE
Confidence 999999998754466777654
No 208
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.45 E-value=3.2e-13 Score=107.88 Aligned_cols=147 Identities=15% Similarity=0.212 Sum_probs=84.3
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcc--cCC-ceEEeCCCCcceecceecC-----------CccCCEEEeCCCceEEeCC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQ--KGL-PLKKYHPPSLPLFPGVHGD-----------GYRVPRITEHPASAVVPRH 146 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~--~G~-y~c~~~~~~~~~~~~~~~~-----------v~~~P~i~~~~~~~~~~~G 146 (238)
..|.|.++.++|+|.|.|.+.+... .+. ..-.+.. ...+. +... ...++.+...+..+.+.+|
T Consensus 78 ~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~--~~~l~-V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G 154 (257)
T 1f3r_B 78 VFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGP--GTMVT-VSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVG 154 (257)
T ss_dssp EEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECC--CEEEE-ECSSCCSSCCSSSCCCCCEECSCEETSEECCCTT
T ss_pred EEEEECCCCcccCEEEEEEEcccccCccccccccccCC--ceEEE-EEeCCccccccccCCCccceEEEccCCEEEEcCC
Confidence 3678889999999999987665311 000 0000000 00111 0000 0012233344566778899
Q ss_pred CcEEEEEEEeeeCCCEEEEEe--CCEEeec---c-------CCccEEEe-cCCcEEEEEeecCCCCCCCeEEEEEEEeCC
Q psy18191 147 EPTTLNCKADGYPEPRIEWYK--DGSLVSA---E-------IGSHRILL-PAGSLFFLSLVHGKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 147 ~~~~L~C~~~g~P~p~i~W~~--~g~~l~~---~-------~~~~~~~~-~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~ 213 (238)
+++.|.|.+.+.|.|.+.|++ +|..+.. . ...+.... .++.. .+.|..+..+|+|.|.|.|.|..
T Consensus 155 ~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 155 DRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDY--TLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp CCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEE--EEEECSCCGGGCSEEEEEEESSS
T ss_pred CCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEE--EEEECCCChhhCEEEEEEEeCCC
Confidence 999999999999999999999 5543310 0 01111111 12222 22377889999999999999975
Q ss_pred CceeEEEEEEEEccCCCCCC
Q psy18191 214 GFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 214 G~~~s~~~~L~V~~~~~~~~ 233 (238)
........|.|.+....+.
T Consensus 233 -~~~g~gt~l~V~~~~~~~~ 251 (257)
T 1f3r_B 233 -YTFGAGTKLELKAAEQKLI 251 (257)
T ss_dssp -EEECCCCEECCSSSCCCCC
T ss_pred -CeECCCEEEEEeCCCcCCc
Confidence 2222355788877655443
No 209
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=1.3e-12 Score=91.11 Aligned_cols=95 Identities=21% Similarity=0.265 Sum_probs=67.6
Q ss_pred ccCCEEEeCCCc---eEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEE
Q psy18191 129 YRVPRITEHPAS---AVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 129 ~~~P~i~~~~~~---~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
..+|.+...|.. +.+.+|+++.|.|.+. .|.|.+.|+++|..+... ....+ ..++.... +.|..+..+|+|.|
T Consensus 8 ~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~-~~~~~-~~~~~~~~-L~I~~v~~~D~G~Y 83 (113)
T 2cpc_A 8 TDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVES-PALLL-QKEDTVRR-LVLPAVQLEDSGEY 83 (113)
T ss_dssp CSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCB-TTBEE-EECSSEEE-EEESSCCTTTCEEE
T ss_pred ccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccC-CCEEE-EECCCEEE-EEECCCCcccCEEE
Confidence 345555444444 6788999999999995 889999999999988753 22222 22332222 23778899999999
Q ss_pred EEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 206 WCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 206 ~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
+|.|.| . +..+.|.|..++...
T Consensus 84 ~C~a~n----~-~~~~~l~V~~~p~~~ 105 (113)
T 2cpc_A 84 LCEIDD----E-SASFTVTVTEPPVRI 105 (113)
T ss_dssp EEESSS----C-EEEEEEEEECCCCCC
T ss_pred EEEEec----C-cEEEEEEEecCCchh
Confidence 999999 3 358889998776443
No 210
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.45 E-value=3.8e-14 Score=109.64 Aligned_cols=129 Identities=15% Similarity=0.177 Sum_probs=79.1
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-C
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-P 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P 159 (238)
..|.|.++..+|+|.|+|.+.+... +. . .... ...+. +......+|.+...+....+.+|+.+.|.|.+.|. |
T Consensus 69 ~~L~I~~v~~~D~G~Y~C~~~n~~~-~~-~-~~~~--~~~l~-V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p 142 (212)
T 1nfd_E 69 ATLTISGAQPEDEAAYYCLSSYGDN-ND-L-VFGS--GTQLT-VLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYP 142 (212)
T ss_dssp EEEEETTCCGGGCSEEEEEEEETTT-TE-E-EECC--CEEEE-EECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBS
T ss_pred EEEEECcCCcccCEEEEEEEEcccC-cc-c-ccCC--ceEEE-EccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeEC
Confidence 3688889999999999987663111 00 0 1111 11111 11112367888765544445679999999999987 5
Q ss_pred C-CEEEEEeCCEEeeccCCccEEE-ecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 160 E-PRIEWYKDGSLVSAEIGSHRIL-LPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 160 ~-p~i~W~~~g~~l~~~~~~~~~~-~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
+ |.+.|+++|..+.......... ..++ ... .+.|..+..+|+|.|+|.|.|..+..
T Consensus 143 ~~~~v~W~k~g~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 143 GSATVTWKANGATINDGVKTTKPSKQGQN-YMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp SCCEEEEEETTEEECSSCBCCCCBCSSSC-EEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred CccEEEEEECCeEcCCCeecCCceecCCC-ceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 5 7999999999886431100000 1111 111 11245558899999999999998765
No 211
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=1.4e-12 Score=91.02 Aligned_cols=95 Identities=15% Similarity=0.164 Sum_probs=70.5
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCcc-------EEEe-cCCcEEEEEeecCCCCCC
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSH-------RILL-PAGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~-------~~~~-~~~~l~~~~vi~~v~~~d 201 (238)
.+|.|...+.+..+.+|+++.|.|.+.+ .|.+.|++||..|..+.... ++.+ .+|... .++|+.+..+|
T Consensus 7 p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~-~L~I~~v~~~D 83 (112)
T 2e6q_A 7 GTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQH-RLILHAVKHQD 83 (112)
T ss_dssp SCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEE-EEEEESCCSTT
T ss_pred CCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEE-EEEECCCCHHH
Confidence 4578888899999999999999999987 77899999999998642111 4333 344322 33478889999
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEEccCCCC
Q psy18191 202 SGVYWCVARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
+|.|+|...+ ...+ ++.|.|.++|-.
T Consensus 84 ~G~Y~~~~~~---~~~s-sA~L~V~~~p~~ 109 (112)
T 2e6q_A 84 SGALVGFSCP---GVQD-SAALTIQESSGP 109 (112)
T ss_dssp CSEEEEEEET---TEEE-EEEEEEECSSCS
T ss_pred CccEEEEEEC---CeeE-EEEEEEeCCCcc
Confidence 9999875443 3444 899999887643
No 212
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.45 E-value=1.6e-13 Score=106.60 Aligned_cols=129 Identities=13% Similarity=0.177 Sum_probs=74.8
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEee-eC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADG-YP 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g-~P 159 (238)
..|.|.++..+|+|.|.|.+.+....+ ...... ...+. +......+|.+...+....+.+|+.+.|.|.+.| .|
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~--~~~~~~--~~~l~-V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 153 (219)
T 1c1e_H 79 AYLQINNLKNEDMATYFCARGTTIVRA--MDYWGQ--GTSLT-VSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFP 153 (219)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTTTE--EEEECC--CEEEE-ECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBS
T ss_pred EEEEECCCCcccCEEEEEEEeccCccc--ceeecC--ceEEE-EecCCCCCCeEEEecCccccccCCeEEEEEEcccccC
Confidence 467888888999999997765532100 001100 11111 1111224577665433344578999999999998 89
Q ss_pred CC-EEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 160 EP-RIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 160 ~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
.| .+.|+++|..+........ . ..+.... ...|.. ...|.|.|+|.|.|..|...
T Consensus 154 ~p~~v~W~~~g~~~~~~~~~~~-~-~~~~~~~~s~L~i~~-~~~d~g~Y~C~a~n~~~~~~ 211 (219)
T 1c1e_H 154 EPVTVTWNSGSLSSGVHTFPAV-L-QSDLYTLSSSVTVPS-SPRPSETVTCNVAHPASSTK 211 (219)
T ss_dssp SCCEEEEGGGTBCTTEEECCCE-E-SSSCEEEEEEEEEES-SSTTTSCCEEEEEEGGGTEE
T ss_pred CCeEEEEEeCCcccceEecCCc-c-cCCeEEEEEEEEEec-ccCCCCEEEEEEEeCCCCcc
Confidence 99 9999999876432101111 1 1232211 112333 33466999999999988764
No 213
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.45 E-value=2.1e-12 Score=102.90 Aligned_cols=93 Identities=15% Similarity=0.300 Sum_probs=61.6
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCC-CEEEEEeC--CEEee---cc-------CCccEE-EecCCcEEEEEeecC
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPE-PRIEWYKD--GSLVS---AE-------IGSHRI-LLPAGSLFFLSLVHG 196 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~-p~i~W~~~--g~~l~---~~-------~~~~~~-~~~~~~l~~~~vi~~ 196 (238)
+|.+...+....+.+|+++.|.|.+.+.|. |.+.|++. +..+. .. ...+.. ........ +.|..
T Consensus 149 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~ 226 (256)
T 3juy_B 149 EIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFT--LTITR 226 (256)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEESS
T ss_pred eeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEE--EEECC
Confidence 456777788899999999999999999886 89999983 22211 00 011111 11222222 23788
Q ss_pred CCCCCCeEEEEEEEeCCCceeEEEEEEEE
Q psy18191 197 KKDTDSGVYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
++.+|+|.|.|.|.|..+........|.|
T Consensus 227 v~~~DsG~Y~C~~~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 227 VEPEDFALYYCQVYGASSYTFGQGTKLER 255 (256)
T ss_dssp CCGGGCSEEEEEECCSSCCEECCCEEEEE
T ss_pred CCHhHCEEEEEEEeeCCCceEcCCEEEEE
Confidence 89999999999999966544334555655
No 214
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.45 E-value=1.8e-13 Score=105.74 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=76.5
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEee-eC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADG-YP 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g-~P 159 (238)
..|.|.++..+|+|.|+|.+.+... ...... ....+. +.. ...+|.+...+....+.+|+.+.|.|.+.| .|
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~~~~~--~~~~~~---~~~~l~-V~~-~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P 143 (213)
T 3nl4_L 71 FTLTISDLECADAATYYCQSTYENP--TYVSFG---GGTEVG-VKG-DPVAPTVLIFPPSADLVATGTVTIVCVANKYFP 143 (213)
T ss_dssp EEEEECSCCGGGCEEEEEEECCSST--TTCEEC---CCEEEE-EEC-CCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBS
T ss_pred EEEEECCCChHHCEEEEEecCCCCc--eeEEeC---CCeEEE-EeC-CCcCCeEEEeCCchhhccCCcEeEEEEEecccC
Confidence 3688889999999999987765321 000000 011111 111 356788776555555677999999999988 89
Q ss_pred CCEEEEEeCCEEeeccCCccE--EEecCCcEE--EEEeecCCCCCCCeEEEEEEE
Q psy18191 160 EPRIEWYKDGSLVSAEIGSHR--ILLPAGSLF--FLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 160 ~p~i~W~~~g~~l~~~~~~~~--~~~~~~~l~--~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
.|.+.|+++|..+........ ....++... ..+.|..+..+|.|.|+|.|.
T Consensus 144 ~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 144 DVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 999999999998863200000 001223322 112255558899999999999
No 215
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.44 E-value=1.6e-13 Score=107.02 Aligned_cols=145 Identities=17% Similarity=0.126 Sum_probs=84.7
Q ss_pred CccEEEeccccccccc--------------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCC
Q psy18191 63 KPICLRFQDLLPQSKQ--------------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDG 128 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~~--------------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v 128 (238)
.+.+.|||++..+... ....|.+..+..+|+|.|+|.+.+. .+...-. ..+. ....+
T Consensus 44 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~--~~~~~~~------~~v~-~~~~~ 114 (218)
T 2rgs_A 44 DVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNK--DLPSPIE------RTIS-KIKGL 114 (218)
T ss_dssp CEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEET--TCSSCEE------EEEC-CCCCC
T ss_pred ceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECC--cCCCcce------EEEe-ecCCC
Confidence 3689999988643211 1124666677777778887665542 1111000 0000 01135
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEee-eCCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEe--ecCCCCCCCeE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADG-YPEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSL--VHGKKDTDSGV 204 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g-~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~v--i~~v~~~d~G~ 204 (238)
..+|.+...+.......|+.+.|.|.+.| .|.| .++|+++|..+............+|.+.+... +.....+|.|.
T Consensus 115 ~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~ 194 (218)
T 2rgs_A 115 VRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDS 194 (218)
T ss_dssp CBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSC
T ss_pred CCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCe
Confidence 57888765543332236999999999998 5666 89999999987532111112234565554332 22222335899
Q ss_pred EEEEEEeCCCce
Q psy18191 205 YWCVARNELGFA 216 (238)
Q Consensus 205 Y~C~a~N~~G~~ 216 (238)
|+|.|.|.....
T Consensus 195 YtC~a~n~~l~~ 206 (218)
T 2rgs_A 195 FSCNVRHEGLKN 206 (218)
T ss_dssp EEEEEECTTSGG
T ss_pred EEEEEEcCCCCC
Confidence 999999987654
No 216
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.44 E-value=1.2e-13 Score=115.50 Aligned_cols=115 Identities=10% Similarity=0.024 Sum_probs=80.2
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEP 161 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p 161 (238)
.|.+.++..+|+|.|+|.+.+.. + ...+. +.. +...|. ..+.+|+++.|.|.+.|.|.|
T Consensus 68 ~L~I~~v~~~D~G~Y~C~~~n~~--~----------~~~l~-----V~~---~~~~~~-~~v~~G~~v~l~C~~~~~p~~ 126 (363)
T 1wio_A 68 PLIIKNLKIEDSDTYICEVEDQK--E----------EVQLL-----VFG---LTANSD-THLLQGQSLTLTLESPPGSSP 126 (363)
T ss_dssp CEEECSCCGGGCEEEEEEETTEE--E----------EEEEE-----EEE---EEESSC-SSEESBSCEEEEEECCTTCCC
T ss_pred EEEECCCCHHHCEEEEEEEEECC--C----------cEEEE-----EEe---CCCCCc-eEEecCCCEEEEEEcCCCCCC
Confidence 47777888888888887766631 1 00111 111 223332 456899999999999999999
Q ss_pred EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCC
Q psy18191 162 RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 162 ~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
.+.|++++..+. ...+.|. |..+..+|+|.|+|.|.|..+... ..+.|.|...+..
T Consensus 127 ~v~W~~~~~~~~---------~~~~~L~----i~~v~~~d~G~Y~C~a~~~~~~~~-~~~~l~v~~~p~~ 182 (363)
T 1wio_A 127 SVQCRSPRGKNI---------QGGKTLS----VSQLELQDSGTWTCTVLQNQKKVE-FKIDIVVLAFQKA 182 (363)
T ss_dssp CEEEECSSSCEE---------EESSEEE----ECSBCGGGCEECEEEEEETTEEEE-ECCEECEECCSCS
T ss_pred eEEEEcCCCccc---------ccceEEE----EeeCChhcCCEEEEEEecCCCeEE-EEEEEEEecCCCC
Confidence 999999975442 2345555 555699999999999999877775 4778888765543
No 217
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.44 E-value=1e-12 Score=92.89 Aligned_cols=94 Identities=17% Similarity=0.180 Sum_probs=65.3
Q ss_pred CCCceEEeCCCcEEEEEEEeee--CCCEEEEEeCCEEeecc---CCccEEEecCC--cEEEEEeecCCCCCCCeEEEEEE
Q psy18191 137 HPASAVVPRHEPTTLNCKADGY--PEPRIEWYKDGSLVSAE---IGSHRILLPAG--SLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~g~~l~~~---~~~~~~~~~~~--~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+..+.+.+|+++.|.|.+.|. |.+.+.|++++..+... ........... .....+.|..++.+|+|.|+|.|
T Consensus 14 p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 93 (122)
T 3s35_X 14 PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAA 93 (122)
T ss_dssp SCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEE
Confidence 3445688999999999999994 45789999988744310 01111111111 01112237788999999999999
Q ss_pred EeCCCceeEEEEEEEEccCCCC
Q psy18191 210 RNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
.|..|... ..+.|.|.++|..
T Consensus 94 ~n~~g~~~-~~~~l~V~~~p~i 114 (122)
T 3s35_X 94 SSGLMTKK-NSTFVRVHEKPFV 114 (122)
T ss_dssp ECSSCEEE-EEEEEEEEEEECC
T ss_pred ccCCCceE-EEEEEEEeccCeE
Confidence 99999997 5999999887654
No 218
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.44 E-value=4.3e-12 Score=115.82 Aligned_cols=160 Identities=18% Similarity=0.092 Sum_probs=104.0
Q ss_pred CCCccEEEeccccccccceEEEEEcCCC-CCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCC
Q psy18191 61 YPKPICLRFQDLLPQSKQGLMYLVGSQA-SPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPA 139 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g~~~l~~~~~-~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~ 139 (238)
.|.|.+.|.+++.....-...-+.+... .....+.|.|.+.+ ..|.+.|... .........+|.|. .+.
T Consensus 103 ~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~--~~G~~~~~~v-------~~~~~~~~~~p~~~-~~~ 172 (731)
T 2v5y_A 103 GPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSG--HQGYLAIDEV-------KVLGHPCTRTPHFL-RIQ 172 (731)
T ss_dssp CCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECS--SCCEEEECCB-------EEESSCCSSSCEEC-CCC
T ss_pred CCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecC--CceEEEEeeE-------Eeeecccccccccc-ccc
Confidence 4678899999987543322222333322 22223567764433 5777776321 11111244678887 566
Q ss_pred ceEEeCCCcEEEEEEEeeeCCCEEE-EE--eCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 140 SAVVPRHEPTTLNCKADGYPEPRIE-WY--KDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~P~p~i~-W~--~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
+..+..|+++.|.|.+.|.|.|.+. |+ ++|..+... ...............|..+...|+|.|+|.|.|..|..
T Consensus 173 ~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~---~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~ 249 (731)
T 2v5y_A 173 NVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLK---EIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVG 249 (731)
T ss_dssp CEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEE---EEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEE
T ss_pred ceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCcccccc---ceEEeccccceEEEEEcccccccCeEEEEEEECCCCCc
Confidence 8999999999999999999999987 88 788776532 11222222122223367779999999999999999983
Q ss_pred eEEEEEEEEccCCCCCC
Q psy18191 217 RSKNATLDVAGKISTAT 233 (238)
Q Consensus 217 ~s~~~~L~V~~~~~~~~ 233 (238)
.+..+.|.|..++.++.
T Consensus 250 ~s~~~~l~V~~~P~~~~ 266 (731)
T 2v5y_A 250 ISNYAELVVKEPPVPIA 266 (731)
T ss_dssp ECCCEEEEEECCCCBSS
T ss_pred ceeeEEEEEecCCCCCC
Confidence 34578899988776554
No 219
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.44 E-value=1e-12 Score=104.77 Aligned_cols=148 Identities=16% Similarity=0.239 Sum_probs=84.0
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce-------ecCCccCCEEEeCCCceEEeCCCcEEEEEE
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV-------HGDGYRVPRITEHPASAVVPRHEPTTLNCK 154 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~-------~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~ 154 (238)
.|.|.++.++|+|.|.|.+.+.. +...........+.+... ...+..+|.+...+....+.+|+++.|.|.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~n~~--~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 164 (257)
T 3gkz_A 87 YLQLKSVSSEDTATYYCSYFDSD--DYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCS 164 (257)
T ss_dssp EEEECSCCGGGCEEEEEEEECTT--CTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCC--CcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEE
Confidence 57888888899999997776531 111111111000011000 000123467777777889999999999999
Q ss_pred EeeeCCC-EEEEEeC--CEEee---cc-------CCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEE
Q psy18191 155 ADGYPEP-RIEWYKD--GSLVS---AE-------IGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNA 221 (238)
Q Consensus 155 ~~g~P~p-~i~W~~~--g~~l~---~~-------~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~ 221 (238)
+.+.|.| .+.|+++ +..+. .. ...+......+.. ..+.|..++.+|+|.|.|.|.|........-.
T Consensus 165 ~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt 243 (257)
T 3gkz_A 165 ASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTS-YSLTISSMEAEDAASYFCHQWSSFPFTFGSGT 243 (257)
T ss_dssp ESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEECSSSSCEECCCE
T ss_pred EccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCE-EEEEECCCChHHCEEEEEEEccCCceEEcCCE
Confidence 9998887 8999983 32211 00 0011111111111 12237888999999999999985544433345
Q ss_pred EEEEccCCCCC
Q psy18191 222 TLDVAGKISTA 232 (238)
Q Consensus 222 ~L~V~~~~~~~ 232 (238)
.|.|...+..|
T Consensus 244 ~l~v~~~~~~~ 254 (257)
T 3gkz_A 244 KLEIKRAPHHH 254 (257)
T ss_dssp EEEECCC----
T ss_pred EEEEEeCCCCC
Confidence 67776655444
No 220
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.43 E-value=4.1e-13 Score=101.75 Aligned_cols=98 Identities=27% Similarity=0.368 Sum_probs=75.1
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
+..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+............+..|. |..++.+|+|.|+|
T Consensus 4 ~~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~----i~~~~~~d~G~Y~C 79 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLT----ILSVEDSDDGIYCC 79 (192)
T ss_dssp CCEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEE----ESSCCGGGCEEEEE
T ss_pred cCCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEE----EcCCCcccCeEEEE
Confidence 44678888878888999999999999999999999999999998875322222222233344 66779999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCC
Q psy18191 208 VARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.+.|..|...+..+.|.|..++
T Consensus 80 ~~~~~~~~~~~~~~~l~v~~~p 101 (192)
T 2iep_A 80 TANNGVGGAVESCGALQVKMKP 101 (192)
T ss_dssp EEECSSSCCEEEEEEEEEEEEE
T ss_pred EEEcCCCceeEeEEEEEEEeCC
Confidence 9999998854456777776543
No 221
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.43 E-value=7e-13 Score=91.46 Aligned_cols=90 Identities=14% Similarity=0.185 Sum_probs=64.7
Q ss_pred ccCCEEEeCCCc-eEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 129 YRVPRITEHPAS-AVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 129 ~~~P~i~~~~~~-~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
..+|.|...+.+ ..+.+|+++.|.|.+ +.|.|.+.|+++|..+..+.....+. .++... .+.|..+..+|+|.|+|
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~-~~~~~~-~L~I~~v~~~D~G~Y~C 89 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFE-SIGAKR-TLTISQCSLADDAAYQC 89 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEE-EETTEE-EEEECSCSSSSCEEEEE
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEE-ecCCEE-EEEECCCCcccCEEEEE
Confidence 356777666555 889999999999999 78999999999999887531222332 234221 22377889999999999
Q ss_pred EEEeCCCceeEEEEEEEEc
Q psy18191 208 VARNELGFARSKNATLDVA 226 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~ 226 (238)
.| |... ..+.|.|.
T Consensus 90 ~a----~~~~-~~~~l~V~ 103 (104)
T 1pd6_A 90 VV----GGEK-CSTELFVK 103 (104)
T ss_dssp EE----TTEE-ECCEEEEE
T ss_pred EE----CCCc-EEEEEEEe
Confidence 99 3343 36677775
No 222
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.43 E-value=4.8e-13 Score=101.75 Aligned_cols=133 Identities=15% Similarity=0.154 Sum_probs=79.0
Q ss_pred CCccEEEec--cccccc----------cce-E-----EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecc
Q psy18191 62 PKPICLRFQ--DLLPQS----------KQG-L-----MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPG 123 (238)
Q Consensus 62 ~~~~~~w~~--~~~~~~----------~~g-~-----~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~ 123 (238)
+.+.+.|++ ++..+. ..+ . ..|.|.++...|+|.|+|.+.+.. |..... ..+.+.
T Consensus 29 ~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~~--g~~~~~----~~~~L~- 101 (182)
T 1hnf_A 29 DIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTK--GKNVLE----KIFDLK- 101 (182)
T ss_dssp SEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEETT--SCEEEE----EEEEEE-
T ss_pred cCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEeCC--CceeEE----EEEEEE-
Confidence 456899999 765431 111 1 145666777777777776554421 110000 000111
Q ss_pred eecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCe
Q psy18191 124 VHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 124 ~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G 203 (238)
+. ....+|.+.. .+..+.|.|.+.+.|.|.+.|+++|..+.. ....+.+ .. ..+|+|
T Consensus 102 V~-~~~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l~~---------~~~~i~~-~~----~~~d~G 158 (182)
T 1hnf_A 102 IQ-ERVSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHLKL---------SQRVITH-KW----TTSLSA 158 (182)
T ss_dssp EE-CCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEEEE---------ESSCEEE-EC----CSCEEE
T ss_pred Ec-CcCCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEECCC---------CCcEEEE-ec----ccCCCc
Confidence 11 1123455543 234789999999999999999999988721 1223321 11 478999
Q ss_pred EEEEEEEeCCCceeEEEEEEEE
Q psy18191 204 VYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
.|+|.|.|.+|...+ ...+..
T Consensus 159 ~Y~C~a~N~~~~~~s-~~~~~c 179 (182)
T 1hnf_A 159 KFKCTAGNKVSKESS-VEPVSC 179 (182)
T ss_dssp EEEEEEECSSCEEEE-EEEEEE
T ss_pred EEEEEEEeCCCCcEE-cceecC
Confidence 999999999999864 655544
No 223
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.43 E-value=4.7e-13 Score=91.83 Aligned_cols=93 Identities=24% Similarity=0.341 Sum_probs=71.4
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.|...+.++.+.+|+++.|.|.+.+.|.| +.|++++..+... .......++.... +.|..++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~--~~~~~~~~~~~~~-L~I~~v~~~D~G~Y~C~- 81 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPG--DKYSLRQEGAMLE-LVVRNLRPQDSGRYSCS- 81 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCS--SSEEEEECSSEEE-EEECSCCTTTCCCEEEE-
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCC--CcEEEEEcCCEEE-EEEccCCcccCEEEEEE-
Confidence 57778777888999999999999999999999 9999999887642 2333334444222 23678899999999998
Q ss_pred EeCCCceeEEEEEEEEccCCCC
Q psy18191 210 RNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
.|... ..+.|.|..++..
T Consensus 82 ---~g~~~-~~~~l~V~~~p~~ 99 (103)
T 2e7b_A 82 ---FGDQT-TSATLTVTALPSG 99 (103)
T ss_dssp ---CSSCB-CCBCEEEECCCCC
T ss_pred ---ECCcE-EEEEEEEEecccc
Confidence 66665 4888999887654
No 224
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.43 E-value=6.6e-13 Score=107.09 Aligned_cols=144 Identities=13% Similarity=0.022 Sum_probs=95.1
Q ss_pred cEEEecccccccc----ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCE-EEeCCC
Q psy18191 65 ICLRFQDLLPQSK----QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPR-ITEHPA 139 (238)
Q Consensus 65 ~~~w~~~~~~~~~----~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~-i~~~~~ 139 (238)
.+.|++++..... .+...|.+.++...|+|.|+|.+.+... .. . .. +.+.+..+|. +...+.
T Consensus 31 ~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--~~------~--~~---~~l~V~~~~~~~~~~~~ 97 (289)
T 3ejj_X 31 SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPM--AG------S--TT---IHLYVKDPAHSWNLLAQ 97 (289)
T ss_dssp CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-------------C--EE---EEEEECCSSCSEEESCS
T ss_pred cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCC--cc------e--eE---EEEEEeCCCcceecccc
Confidence 4899987653211 2235678889999999999987665322 10 0 11 1111333443 555667
Q ss_pred ceEEeCCCcEEEEEEEeeeCCCE-EEEEe-CCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC-CCce
Q psy18191 140 SAVVPRHEPTTLNCKADGYPEPR-IEWYK-DGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE-LGFA 216 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~P~p~-i~W~~-~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~-~G~~ 216 (238)
...+.+|+++.|.|.+.+.|.+. +.|++ ++..+.. ........++.|. |..+..+|+|.|+|.|.|. .+..
T Consensus 98 ~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~--~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~~~~~~~~ 171 (289)
T 3ejj_X 98 EVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLR--KTVYFFSPWRGFI----IRKAKVLDSNTYVCKTMVNGREST 171 (289)
T ss_dssp EEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCT--TCCEEEETTTEEE----ESSCCGGGCEEEEEEEEETTEEEE
T ss_pred eEEEecCCceEeEEEccCCCcceEEEEEecCCeecCC--CccEEECCCCCEE----EeecccccCEEEEEEEEeCCCccc
Confidence 88899999999999999887775 99986 6666543 2333334456665 5666999999999999954 4444
Q ss_pred eEEEEEEEEccC
Q psy18191 217 RSKNATLDVAGK 228 (238)
Q Consensus 217 ~s~~~~L~V~~~ 228 (238)
+..+.|.|...
T Consensus 172 -~~~~~l~V~~~ 182 (289)
T 3ejj_X 172 -STGIWLKVNRV 182 (289)
T ss_dssp -CCCEEEEEESS
T ss_pred -cccEEEEEEEC
Confidence 45888888753
No 225
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.43 E-value=7.8e-13 Score=99.53 Aligned_cols=98 Identities=26% Similarity=0.452 Sum_probs=71.3
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
+|.|...|.+..+.+|+++.|.|.+.|.|.|.+.|++++..+... .................|..++.+|+|.|+|.|.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNL-DQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSS-EEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCC-CceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 467777788899999999999999999999999999999988753 1222222232222233377889999999999999
Q ss_pred eCCCceeEEEEEEEEccCC
Q psy18191 211 NELGFARSKNATLDVAGKI 229 (238)
Q Consensus 211 N~~G~~~s~~~~L~V~~~~ 229 (238)
|..|...+..+.|.|..+|
T Consensus 81 ~~~~~~~~~~~~l~V~~~p 99 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEGVP 99 (182)
T ss_dssp SCTTCEECCCEEEEEECSC
T ss_pred cCCCcEEEEEEEEEEecCC
Confidence 9988755568888887655
No 226
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.42 E-value=3.8e-13 Score=105.45 Aligned_cols=127 Identities=13% Similarity=0.151 Sum_probs=78.5
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-C
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-P 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P 159 (238)
..|.+.++..+|+|.|+|...+.. +. .... ...+. +.. ...+|.+...+....+.+|+.+.|.|.+.|. |
T Consensus 94 ~~L~I~~v~~~D~G~Y~C~~~~~~--~~---~~~~--~~~l~-V~~-~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p 164 (237)
T 3sob_L 94 FTLTISSLQPEDFATYYCQQSYTT--PP---TFGQ--GTKVE-IKR-TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYP 164 (237)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSS--SC---EECC--CEEEE-EEC-CCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBS
T ss_pred EEEEECCCChhhCeEEEEeeccCC--ce---EEcC--cEEEE-Eec-CCCCCceEEeCCChhhccCCceEEEEEEcccCC
Confidence 457888899999999997765532 10 0000 01111 111 3567888765554445568899999999885 4
Q ss_pred -CCEEEEEeCCEEeeccC--CccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 160 -EPRIEWYKDGSLVSAEI--GSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 160 -~p~i~W~~~g~~l~~~~--~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
.|.+.|+++|..+.... ........++...+ ...|..+..+|.|.|+|.|.|.....
T Consensus 165 ~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 165 REAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp SCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred CceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 48999999999886420 00001112343322 12245557788999999999998654
No 227
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.42 E-value=2.3e-12 Score=102.74 Aligned_cols=144 Identities=13% Similarity=0.146 Sum_probs=81.0
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee---------------cCCccCCEEEeCCCceEEeC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH---------------GDGYRVPRITEHPASAVVPR 145 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~---------------~~v~~~P~i~~~~~~~~~~~ 145 (238)
..|.|.++.++|+|.|.|.+.+... .+.-..... ..+.+.. .....+|.+...|....+.+
T Consensus 76 ~sL~I~~v~~~DsG~Y~C~~~~~~~--~~~~~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~ 151 (256)
T 3tf7_C 76 FHLRKASVHRSDSAVYFCAVSAKGT--GSKLSFGKG--AKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVT 151 (256)
T ss_dssp EEEEESSCCGGGCSEEEEEEECTTC--TTCEEECCC--EEEEEEC---------------------CCEEESCSEEEEET
T ss_pred EEEEECCCCcccCEEEEEEEecCCC--ccceEECCC--eEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeC
Confidence 3578888899999999977655321 110111100 0111000 00234677888888888999
Q ss_pred CCcEEEEEEEeeeCCCEEEEEeCC--EEe---ec--cC--------CccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 146 HEPTTLNCKADGYPEPRIEWYKDG--SLV---SA--EI--------GSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 146 G~~~~L~C~~~g~P~p~i~W~~~g--~~l---~~--~~--------~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
|+++.|.|.+.+. .|.+.|++.. ..+ .. .. ..+............+.|..++.+|+|.|.|.|.
T Consensus 152 G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 230 (256)
T 3tf7_C 152 GENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASS 230 (256)
T ss_dssp TCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEE
T ss_pred CCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEec
Confidence 9999999999887 7899999832 111 10 00 0010011011001112377889999999999999
Q ss_pred eCCCceeE-EEEEEEEccCC
Q psy18191 211 NELGFARS-KNATLDVAGKI 229 (238)
Q Consensus 211 N~~G~~~s-~~~~L~V~~~~ 229 (238)
|..|.... .-..|.|....
T Consensus 231 n~~g~~~fG~gt~l~v~~~~ 250 (256)
T 3tf7_C 231 DAPGQLYFGEGSKLTVLELE 250 (256)
T ss_dssp EETTEEEECCCEEEEEECGG
T ss_pred CCCCccEECCCeEEEEEccc
Confidence 98765421 13356665544
No 228
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.42 E-value=2.5e-12 Score=104.51 Aligned_cols=97 Identities=28% Similarity=0.402 Sum_probs=77.5
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEe-cCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILL-PAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.|...|.++.+.+|+++.|.|.+.|.|.|.+.|++++..+........+.. .++...+ .|..++.+|+|.|+|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L--~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQL--IIASVTDDDATVYQVR 80 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEE--EESSCCGGGCSEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEE--EEccCChhhCeEEEEE
Confidence 589999999999999999999999999999999999999998875422233322 3332222 2677899999999999
Q ss_pred EEeCCCceeEEEEEEEEccCC
Q psy18191 209 ARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.|..|... ..+.|.|..++
T Consensus 81 a~n~~g~~~-~~~~l~V~~~p 100 (305)
T 2nzi_A 81 ATNQGGSVS-GTASLEVEVPA 100 (305)
T ss_dssp EEETTEEEE-EEEEEEECEEE
T ss_pred EEcCCCCcc-ceEEEEEecCC
Confidence 999999885 58899987654
No 229
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.42 E-value=1.9e-12 Score=98.54 Aligned_cols=99 Identities=16% Similarity=0.250 Sum_probs=75.2
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEe-eeCCCEEEEEeCCEEeeccCC-ccEEEecCC---cE--EEEEeecCCCCCCCe
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKAD-GYPEPRIEWYKDGSLVSAEIG-SHRILLPAG---SL--FFLSLVHGKKDTDSG 203 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~-g~P~p~i~W~~~g~~l~~~~~-~~~~~~~~~---~l--~~~~vi~~v~~~d~G 203 (238)
+|.|...|.+..+.+|+++.|.|.+. |.|.|.+.|+++|..+..... ..++....+ .. ...+.|..++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 67888889999999999999999999 999999999999998875311 112222221 11 122237788999999
Q ss_pred EEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 204 VYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|+|.|.|..|...+..+.|.|..+|
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~p 107 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGLP 107 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCSC
T ss_pred EEEEEEEeCCCceecccEEEEEecCC
Confidence 99999999988876555888887665
No 230
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.41 E-value=7.8e-13 Score=102.13 Aligned_cols=126 Identities=13% Similarity=0.126 Sum_probs=71.7
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee---
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY--- 158 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~--- 158 (238)
.|.|.++...|+|.|.|...+.. + ...........+.+ .....+|.+.. +.. +.+|+.+.|.|.+.|.
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~--~--~~~~~~~~~~~l~V--~~~~~~p~i~~-~~~--~~~G~~v~L~C~~~~~~~~ 153 (214)
T 2zg1_A 83 SLSIGDARMEDTGSYFFRVERGR--D--VKYSYQQNKLNLEV--TALIEKPDIHF-LEP--LESGRPTRLSCSLPGSCEA 153 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETT--T--EEEECCSSCEEEEE--ECCCCCCEEC---CC--CCTTCCEEEEEECTTCCSC
T ss_pred EEEEccCCHhhCceEEEEEEcCC--C--ceeeecCCceEEEE--ecCCCCCceec-Ccc--ccCCCeEEEEEEeccCCCC
Confidence 46777788888888886654421 0 00000111111221 11223566644 222 5789999999999764
Q ss_pred -CCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCcee-EEEEEEEE
Q psy18191 159 -PEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFAR-SKNATLDV 225 (238)
Q Consensus 159 -P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~-s~~~~L~V 225 (238)
|.|.+.|++++..+.. .. ....+.|. |..+..+|.|.|+|.|.|..|... +..+.|.|
T Consensus 154 ~p~p~v~W~~~~~~~~~---~~--~~~~~~L~----i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 154 GPPLTFSWTGNALSPLD---PE--TTRSSELT----LTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp SSCCEEEEESSTTSSSC---SS--CCCSSEEE----ECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred CCCceEEEeCCCCccCC---CC--ceeEEEEE----EecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 8999999999865321 11 12234454 455588899999999999875432 23555544
No 231
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.41 E-value=4e-13 Score=104.16 Aligned_cols=126 Identities=10% Similarity=0.092 Sum_probs=76.1
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~ 160 (238)
.|.|.++..+|+|.|.|.+.+.. | .. ..... ..+. ......+|.+...+.......|+.+.|.|.+.|. |.
T Consensus 73 ~L~I~~v~~~D~G~Y~C~~~~~~--~-~~-~~~~~--~~l~--V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~ 144 (216)
T 2xzc_L 73 TLGITGLQTGDEADYYCGTWDSS--L-NP-VFGGG--TKLE--IKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPR 144 (216)
T ss_dssp EEEECSCCGGGCEEEEEEEECTT--S-CE-EEBCC--EEEE--ECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSS
T ss_pred EEEECCCCcccCEEEEEEEEeCC--C-cc-eECCC--EEEE--EcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCC
Confidence 67888888999999998776532 1 00 00000 1111 1112357877664333223468899999999884 55
Q ss_pred C-EEEEEeCCEEeeccCCccEE---EecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 161 P-RIEWYKDGSLVSAEIGSHRI---LLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~~~~~~~---~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
| .+.|+++|..+.... .... ...++.... .+.|..+..+|.|.|+|.|.|.....
T Consensus 145 ~~~v~W~k~g~~~~~~~-~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 145 EAKVQWKVDNALQSGNS-QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp CCEEEEEETTEECCSSE-EEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred ceEEEEEECCeecCCCe-eEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 4 899999999876320 0111 112333221 22255558889999999999987654
No 232
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.41 E-value=5.5e-13 Score=107.71 Aligned_cols=142 Identities=15% Similarity=0.032 Sum_probs=94.3
Q ss_pred EEEecccccc---cc-ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCE-EEeCCCc
Q psy18191 66 CLRFQDLLPQ---SK-QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPR-ITEHPAS 140 (238)
Q Consensus 66 ~~w~~~~~~~---~~-~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~-i~~~~~~ 140 (238)
+.|+++..+- .. .....|.+.++...|+|.|+|.+.+... .... .+.+.+..+|. +...+..
T Consensus 32 v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~--~~~~-----------~~~l~V~~~~~~~~~~~~~ 98 (292)
T 4dkd_C 32 VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPL--GGSA-----------AIHLYVKDPARPWNVLAQE 98 (292)
T ss_dssp CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC------CCE-----------EECCEECCSSCCEEESCSE
T ss_pred eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCC--Ccce-----------EEEEEEcCccccccccCCe
Confidence 7788765421 11 1235788899999999999987665321 1111 11112334444 3455677
Q ss_pred eEEeCCCcEEEEEEEeeeCC--CEEEEEeC-CEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 141 AVVPRHEPTTLNCKADGYPE--PRIEWYKD-GSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 141 ~~~~~G~~~~L~C~~~g~P~--p~i~W~~~-g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
..+.+|+.+.|.|.+.+ |. |.+.|+++ +..+.. ........++.|. |..+..+|+|.|+|.|.|..|...
T Consensus 99 ~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~--~~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a~n~~~~~~ 171 (292)
T 4dkd_C 99 VVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMR--HTNYSFSPWHGFT----IHRAKFIQSQDYQCSALMGGRKVM 171 (292)
T ss_dssp EEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCS--SCCEECCSSSCCE----ETTCCGGGCSEEEEEECSTTSCEE
T ss_pred EEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCcccc--CCcccccCCceEE----ECCCCHHHCeEEEEEEEeCCCcee
Confidence 88999999999999987 54 78999997 444432 2222233344554 667799999999999999988775
Q ss_pred EEEEEEEEcc
Q psy18191 218 SKNATLDVAG 227 (238)
Q Consensus 218 s~~~~L~V~~ 227 (238)
+..+.|.|..
T Consensus 172 s~~~~l~V~~ 181 (292)
T 4dkd_C 172 SISIRLKVQK 181 (292)
T ss_dssp CCCEEEEEEC
T ss_pred EEEEEEEEeC
Confidence 5588888876
No 233
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.41 E-value=6e-13 Score=102.79 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=75.7
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~ 160 (238)
.|.|.++..+|+|.|.|.+.+....| ....+. +......+|.+...+....+.+|+.+.|.|.+.|. |.
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~~~~---------~~~~l~-V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~ 148 (210)
T 3d9a_H 79 YLDLNSVTTEDTATYYCANWDGDYWG---------QGTLVT-VSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPE 148 (210)
T ss_dssp EEEECSCCGGGCEEEEEEETTSSCBC---------CCEEEE-ECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSS
T ss_pred EEEECCCCcccCEEEEEEEecCcccc---------cceEEE-eccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecC
Confidence 67788888888888887776532111 011111 11112346776654433446789999999999987 88
Q ss_pred C-EEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 161 P-RIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
| .+.|++++..+........ . .++.... ...|..+..+| |.|+|.|.|..|...
T Consensus 149 p~~v~W~~~~~~~~~~~~~~~-~-~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 205 (210)
T 3d9a_H 149 PVTVTWNSGSLSSGVHTFPAV-L-QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTK 205 (210)
T ss_dssp CCEEEEGGGTBCTTEEECCCE-E-ETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEE
T ss_pred CcEEEEeeCCcccceEEcCCc-c-CCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 8 9999999875422111111 1 1232211 12245556656 999999999998864
No 234
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.41 E-value=2.9e-12 Score=105.38 Aligned_cols=132 Identities=12% Similarity=0.094 Sum_probs=84.3
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEe--CCCceEEeCC---CcEEEEEE-E
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITE--HPASAVVPRH---EPTTLNCK-A 155 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~--~~~~~~~~~G---~~~~L~C~-~ 155 (238)
.|.+.++...|+|.|+|..... ..| .....+.+.+..+|.+.. .+....+.+| +.+.|.|. +
T Consensus 93 ~L~I~~v~~~D~G~Y~C~~~~~-~~~-----------~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~ 160 (331)
T 3u83_A 93 TIRLSRLELEDEGVYICEFATF-PTG-----------NRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSA 160 (331)
T ss_dssp CEEECSCCGGGCEEEEEEEEEE-TTE-----------EEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEE
T ss_pred eEEEcccCcccCcEEEEEEEec-CCC-----------ccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEec
Confidence 3666677777777777652211 111 111122233456776633 4566788888 77999998 8
Q ss_pred eeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEE--EeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 156 DGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFL--SLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 156 ~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~--~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|.|.|.+.|++++..... .......++.+.+. ..|..+..+|+|.|+|.|.|..|... ..+.|.|..+|
T Consensus 161 ~~~p~~~i~W~~~~~~~~~---~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~-~~~~l~V~~~P 232 (331)
T 3u83_A 161 NGKPPSVVSWETRLKGEAE---YQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFK-ESLTLNVQYEP 232 (331)
T ss_dssp EEBSCCEEEEEESSCCEEE---EEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEE-EEEECCEEEEE
T ss_pred CCcCCceEEEEcCCCCccc---cceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcce-eeEEEEEecCC
Confidence 8999999999996322221 11222334444332 23667789999999999999999875 58888875443
No 235
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.41 E-value=4.8e-13 Score=106.29 Aligned_cols=125 Identities=10% Similarity=0.096 Sum_probs=75.6
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeC-C
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYP-E 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P-~ 160 (238)
.|.+.++..+|+|.|+|.+.+... . ..... ..........+|.+...+.......|+.+.|.|.+.|.+ +
T Consensus 114 ~L~I~~v~~~D~G~Y~C~a~n~~~--~---~~~~~----~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~ 184 (254)
T 2c1o_A 114 TLKISRVEAEDLGIYYCVQGSHFP--P---TFGAG----TKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK 184 (254)
T ss_dssp EEEESSCCGGGCSEEEEEECSSSS--C---EEBCC----EEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSS
T ss_pred EEEECcCCcccCEEEEEEEEcCcc--e---EecCC----EEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCC
Confidence 678888888999999977765311 0 00000 011111133578777644433334688999999998854 4
Q ss_pred -CEEEEEeCCEEeeccCCccEEE---ecCCcE--EEEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 161 -PRIEWYKDGSLVSAEIGSHRIL---LPAGSL--FFLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 161 -p~i~W~~~g~~l~~~~~~~~~~---~~~~~l--~~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
+.++|+++|..+.... ..... ..++.. ...+.|..+..+|+|.|+|.|.|.....
T Consensus 185 ~~~v~W~k~g~~l~~~~-~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 185 DINVKWKIDGSERQNGV-LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp CCEEEEEESSSEECTTE-EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CcEEEEEECCCcccCcc-eeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 4699999998876420 01111 112221 1122355668899999999999988654
No 236
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.40 E-value=8.6e-13 Score=107.62 Aligned_cols=132 Identities=13% Similarity=0.089 Sum_probs=80.0
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCE--EEeCCCceEEeCCCcEEEEEEE-eee
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPR--ITEHPASAVVPRHEPTTLNCKA-DGY 158 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~--i~~~~~~~~~~~G~~~~L~C~~-~g~ 158 (238)
.|.|.++..+|+|.|+|.+.+. ..|.... .....+..+|. +...+.......|+.+.|.|.+ .|.
T Consensus 75 sL~I~~v~~~D~G~Y~C~a~n~-~~~~~~~-----------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~ 142 (308)
T 4fom_A 75 TITLHNIGFSDSGKYICKAVTF-PLGNAQS-----------STTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGK 142 (308)
T ss_dssp CEEECSCCGGGCEEEEEEEEET-TTEEEEE-----------EEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEB
T ss_pred EEEEccCCHHHCEEEEEEEeeC-CCcceee-----------eeEEEeeeccccccccccceeEEcCCceEEEEEEecCCc
Confidence 3677788888888888655432 1111111 11111223333 2334555556678899999985 789
Q ss_pred CCCEEEEEeCCEEeeccCCccEEEecCCcE--EEEEeecCCCCCCCeEEEEEEEeCCCcee-EEEEEEEEccCC
Q psy18191 159 PEPRIEWYKDGSLVSAEIGSHRILLPAGSL--FFLSLVHGKKDTDSGVYWCVARNELGFAR-SKNATLDVAGKI 229 (238)
Q Consensus 159 P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l--~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~-s~~~~L~V~~~~ 229 (238)
|.|.++|++++..+... ......+.. .....|..+...|.|.|+|.|.|..|... ...+.|.|..+|
T Consensus 143 P~~~i~W~~~~~~~~~~----~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P 212 (308)
T 4fom_A 143 PVAHIDWEGDLGEMEST----TTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAP 212 (308)
T ss_dssp SCCEEEECCCSSBCCEE----EEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEE
T ss_pred CCceEEEEECCcccccc----cceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCC
Confidence 99999999999877532 112222222 11233677799999999999999887653 235556555443
No 237
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.40 E-value=4.1e-12 Score=102.88 Aligned_cols=142 Identities=15% Similarity=0.199 Sum_probs=82.2
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCC-ceEEeCCCCcceecceecC----------CccCCEEEeCCCceEEeCCCcE
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGL-PLKKYHPPSLPLFPGVHGD----------GYRVPRITEHPASAVVPRHEPT 149 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~-y~c~~~~~~~~~~~~~~~~----------v~~~P~i~~~~~~~~~~~G~~~ 149 (238)
..|.|.++.++|+|.|.|...+.. |. +.-.+.. ...+.+.... ...+|.+...|..+.+.+|+++
T Consensus 105 ~sL~I~~v~~~DsG~Y~C~~~n~~--g~~~~~~~~~--~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v 180 (282)
T 1qok_A 105 AYLQLSSLTSEDTAVYYCNEGTPT--GPYYFDYWGQ--GTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKV 180 (282)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSS--SSCCCEEECC--CEEEEEEC---------------CCCEEEECSEEEECTTCCE
T ss_pred EEEEECcCChhhCEEEEEEeccCC--CccceeeeCC--CEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcE
Confidence 457888888899999987766532 10 0000000 0011100000 0124556666777889999999
Q ss_pred EEEEEEeeeCCCEEEEEe--CCEEeec---c-------CCccEEE-ecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 150 TLNCKADGYPEPRIEWYK--DGSLVSA---E-------IGSHRIL-LPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 150 ~L~C~~~g~P~p~i~W~~--~g~~l~~---~-------~~~~~~~-~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
+|.|.+.+.| |.+.|+| +|..+.. . ...+... ....... +.|..+..+|+|.|.|.|.|..+..
T Consensus 181 ~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v~~~DsG~Y~C~a~~~~~~~ 257 (282)
T 1qok_A 181 TITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYS--LTISRMEAEDAATYYCQQRSSYPLT 257 (282)
T ss_dssp EEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSCCGGGCEEEEEEECSSSSCE
T ss_pred EEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEE--EEEccCChhHCEEEEEEEeeCCCce
Confidence 9999999999 9999999 5544310 0 0111111 1122222 2378889999999999999865433
Q ss_pred eEEEEEEEEccCC
Q psy18191 217 RSKNATLDVAGKI 229 (238)
Q Consensus 217 ~s~~~~L~V~~~~ 229 (238)
......|.|.+..
T Consensus 258 fg~gt~l~V~~~~ 270 (282)
T 1qok_A 258 FGAGTKLELKRAA 270 (282)
T ss_dssp ECCCEEEEEC---
T ss_pred EeCCEEEEEeccc
Confidence 3345677776543
No 238
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.39 E-value=5.5e-12 Score=101.74 Aligned_cols=142 Identities=13% Similarity=0.149 Sum_probs=77.0
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecC---------CccCCEEEeCCCceEEeCCCcEEEE
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGD---------GYRVPRITEHPASAVVPRHEPTTLN 152 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~---------v~~~P~i~~~~~~~~~~~G~~~~L~ 152 (238)
.|.|.++.++|+|.|.|.+.+... ... .....+.+.... ...++.+...|....+.+|+++.|.
T Consensus 83 ~L~I~~v~~~DsG~Y~C~~~n~~~--~~~-----~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~ 155 (276)
T 3auv_A 83 TLTISSLQPEDFATYYCQQHYTTP--PTF-----GCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLS 155 (276)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSS--CCC-----CCCEEEEC-----------------CCEEEEECCEEECTTCCEEEE
T ss_pred EEEEccCChhhCEEEEEEEecCCc--ccc-----cCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEE
Confidence 678888899999999977765321 000 000111100000 0012223334567889999999999
Q ss_pred EEEeeeC--CCEEEEEeCC--EEe---e---c---------cCCccEEEecC-CcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 153 CKADGYP--EPRIEWYKDG--SLV---S---A---------EIGSHRILLPA-GSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 153 C~~~g~P--~p~i~W~~~g--~~l---~---~---------~~~~~~~~~~~-~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
|.+.|.| .|.+.|++++ ..+ . . ....+.....+ ......+.|..++.+|+|.|.|.|.|.
T Consensus 156 C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 156 CAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 9999876 5899999963 211 1 0 00112111111 001112237788999999999999998
Q ss_pred C---Cc-eeEEEEEEEEccCCC
Q psy18191 213 L---GF-ARSKNATLDVAGKIS 230 (238)
Q Consensus 213 ~---G~-~~s~~~~L~V~~~~~ 230 (238)
. +. .......|.|.+.+.
T Consensus 236 ~~~~~~~~fg~gt~l~V~~~~~ 257 (276)
T 3auv_A 236 FLPYAMDYWGQGTLVTVSSASA 257 (276)
T ss_dssp STTCSCCCBCCCEEEEEC----
T ss_pred cCCcCceEECCCEEEEEccccc
Confidence 3 21 111245777765443
No 239
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.38 E-value=2.8e-13 Score=123.62 Aligned_cols=148 Identities=16% Similarity=0.113 Sum_probs=31.5
Q ss_pred CccEEEecccccccc-----------------ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee
Q psy18191 63 KPICLRFQDLLPQSK-----------------QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH 125 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~-----------------~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~ 125 (238)
.+.+.|++++..... .....|.+..+..+|+|.|+|.+.+.. |. ....+.
T Consensus 255 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~--~~-----------~~~~~~ 321 (772)
T 3v2a_R 255 GIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL--MT-----------KKNSTF 321 (772)
T ss_dssp CCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSS--CE-----------EEEEEE
T ss_pred ceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCC--cc-----------eeEEEE
Confidence 457999998764221 112467788899999999998776532 21 111111
Q ss_pred cCCccCCEEEeCC---CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCC
Q psy18191 126 GDGYRVPRITEHP---ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 126 ~~v~~~P~i~~~~---~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~ 202 (238)
+.+..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|+++|..+... ..+ ...+.|.+ ..+..+|+
T Consensus 322 l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~---~~~-~~~~~L~i----~~v~~~d~ 393 (772)
T 3v2a_R 322 VRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESN---HTI-KAGHVLTI----MEVSERDT 393 (772)
T ss_dssp EEEECCCC------------------------------------------------------------------------
T ss_pred EEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCC---ceE-ccceeEEE----ecCChhcC
Confidence 2244566654332 3567889999999999999999999999999887642 111 12355554 44599999
Q ss_pred eEEEEEEEeCCCcee-EEEEEEEEccCCCC
Q psy18191 203 GVYWCVARNELGFAR-SKNATLDVAGKIST 231 (238)
Q Consensus 203 G~Y~C~a~N~~G~~~-s~~~~L~V~~~~~~ 231 (238)
|.|+|.|.|..|... +..+.|.|..+|..
T Consensus 394 G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~ 423 (772)
T 3v2a_R 394 GNYTVILTNPISKEKQSHVVSLVVYVPPQI 423 (772)
T ss_dssp ------------------------------
T ss_pred ceEEEEEEECCcCeEEEEEEEEEEecCCcc
Confidence 999999999998753 24667777666544
No 240
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.38 E-value=3.1e-12 Score=98.31 Aligned_cols=100 Identities=55% Similarity=0.888 Sum_probs=78.7
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCC---ccEEEecCCcEEEEE-eecCCCCCCCeE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIG---SHRILLPAGSLFFLS-LVHGKKDTDSGV 204 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~---~~~~~~~~~~l~~~~-vi~~v~~~d~G~ 204 (238)
..+|.|...|.++.+.+|+++.|.|.+.|.|.|.+.|++++..+..... ..+....++.+.+.. .|..+..+|+|.
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 4688999989999999999999999999999999999999998865321 234455566665432 245678999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEccC
Q psy18191 205 YWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|+|.|.|..|...+..+.|.|...
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~ 110 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAIL 110 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEE
T ss_pred EEEEEECCCCceeecceEEEEEec
Confidence 999999999887445777877653
No 241
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.37 E-value=3e-12 Score=88.51 Aligned_cols=91 Identities=22% Similarity=0.331 Sum_probs=67.0
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.|...+.+..+.+|+++.|.|.+.+. |.+.|++++..+... ....+ ..++.... +.|..++.+|+|.|+|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~-~~~~~-~~~~~~~~-L~I~~v~~~D~G~Y~C~a 81 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDG-GRYSL-KQDGTRCE-LQIHDLSVADAGEYSCMC 81 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSS-SSCEE-EEETTEEE-EEESSCCTTTCSEEEEEE
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCC-CCEEE-EecCCEEE-EEECCCCcccCEEEEEEE
Confidence 67888877888999999999999999765 789999999887642 22222 23343221 237788999999999999
Q ss_pred EeCCCceeEEEEEEEEccCCC
Q psy18191 210 RNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 210 ~N~~G~~~s~~~~L~V~~~~~ 230 (238)
.| .. ..+.|.|..++.
T Consensus 82 ~n----~~-~~~~l~V~~~p~ 97 (108)
T 2dm7_A 82 GQ----ER-TSATLTVRALPA 97 (108)
T ss_dssp TT----EE-EEEECEEECCCS
T ss_pred cC----CE-EEEEEEEecCCH
Confidence 44 43 488888877543
No 242
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.37 E-value=1.4e-12 Score=92.72 Aligned_cols=91 Identities=20% Similarity=0.307 Sum_probs=63.9
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeec------cCCcc-EEE-ecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSA------EIGSH-RIL-LPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~------~~~~~-~~~-~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+.. ....+ ... ...+... +.|..++.+|+|.|.|.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~--L~I~~v~~~DsG~Y~C~ 84 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLS--ITVPNVTLQDEGVYKCL 84 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEE--EEESSCCGGGCEEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEE--EEECCCChHHCEEEEEE
Confidence 34568889999999999999999999999986543321 00111 111 1112222 23788899999999999
Q ss_pred EEeCCCceeEEEEEEEEccCCCC
Q psy18191 209 ARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
|.|. |... ..+.|.|..+|..
T Consensus 85 a~n~-g~~~-~~~~l~V~~~P~~ 105 (124)
T 3rbg_A 85 HYSD-SVST-KEVKVIVLATMKG 105 (124)
T ss_dssp EESS-SEEE-EEEEEEEECC---
T ss_pred EEcC-CCCc-EEEEEEEEeCCCC
Confidence 9999 8886 5999999887654
No 243
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.37 E-value=3.3e-12 Score=98.56 Aligned_cols=132 Identities=12% Similarity=0.006 Sum_probs=80.1
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEE-eeeCC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKA-DGYPE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~-~g~P~ 160 (238)
.|.|.++..+|+|.|+|.+.+.. |... .......+..+|.+...+.......++.+.+.|.+ .+.|+
T Consensus 84 sL~I~~v~~~D~G~Y~C~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~ 151 (225)
T 4fmk_A 84 TLAFRGLRVEDEGNYTCEFATFP--NGTR----------RGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPP 151 (225)
T ss_dssp CEEECSCCGGGCEEEEEEEEEET--TEEE----------EEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSC
T ss_pred EEEEccCCHHHCcceEEEEEeCC--Ccce----------eeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCC
Confidence 36777888888888887654421 1100 01111113345555555455556677777777765 67788
Q ss_pred CEEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCcee-EEEEEEEEcc
Q psy18191 161 PRIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFAR-SKNATLDVAG 227 (238)
Q Consensus 161 p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~-s~~~~L~V~~ 227 (238)
|.+.|++++..+... .......++.... .+.|..+..+|.|.|+|.|.|..|... +.+++|.|+.
T Consensus 152 ~~~~w~~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 152 ARITWISSLGGEAKD--TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp CEEEEECSSCCEEEE--EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred CEEEEEECCccccCC--cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 999999987665431 1222233444322 233677799999999999999988763 2355565544
No 244
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.36 E-value=5.3e-12 Score=103.29 Aligned_cols=131 Identities=14% Similarity=0.065 Sum_probs=84.2
Q ss_pred EEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEE-eeeCCC
Q psy18191 83 LVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKA-DGYPEP 161 (238)
Q Consensus 83 l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~-~g~P~p 161 (238)
|.|.++..+|+|.|+|..... ..|. ....+.+.+..+|.+...+....+..|+.+.|.|.+ .|.|.|
T Consensus 81 L~I~~v~~~D~G~Y~C~v~~~-~~~~-----------~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~ 148 (313)
T 4fqp_A 81 LRMFGLRVEDEGNYTCLFVTF-PQGS-----------RSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPA 148 (313)
T ss_dssp EEECSCCGGGCEEEEEEEECS-SSCE-----------EEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCC
T ss_pred EEECcCChhhCEEEEEEEeec-cCcc-----------eeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCc
Confidence 667777777888887654321 1121 111222335677887776666777788899999986 478999
Q ss_pred EEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCcee-EEEEEEEEcc
Q psy18191 162 RIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFAR-SKNATLDVAG 227 (238)
Q Consensus 162 ~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~-s~~~~L~V~~ 227 (238)
.+.|++++..+... .......++...+ ...|..+...|.|.|+|.|.|..+... +..+.|.|..
T Consensus 149 ~i~W~~~~~~~~~~--~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~ 215 (313)
T 4fqp_A 149 QITWHSDLGGMPNT--SQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYY 215 (313)
T ss_dssp EEEEEETTCCEEEE--EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCE
T ss_pred EEEeecCCcccccc--ceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeeccccc
Confidence 99999999877642 1122223444332 233566788899999999999886642 2345555543
No 245
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.36 E-value=7.7e-13 Score=103.70 Aligned_cols=124 Identities=9% Similarity=0.085 Sum_probs=64.2
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCC-
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPE- 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~- 160 (238)
.|.|.++..+|+|.|.|.+.+.. +... . ....+. ......+|.+...+.......|+.+.|.|.+.|.++
T Consensus 94 ~L~I~~v~~~D~G~Y~C~~~~~~--~~~~----~-~~~~l~--V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~ 164 (233)
T 3bqu_C 94 VFTIENMLSEDVADYYCLQSDNL--PYTF----G-GGTNLE--IKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK 164 (233)
T ss_dssp EEC-----CCCCSEEEEEECSSS--SCCB----C-CCCBC-----CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSS
T ss_pred EEEECCCCHHHCEEEEEEEecCC--ceee----c-CCEEEE--EeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCC
Confidence 68888999999999998776532 1000 0 000111 111224777766444333447999999999998644
Q ss_pred C-EEEEEeCCEEeeccCCccEE---EecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCc
Q psy18191 161 P-RIEWYKDGSLVSAEIGSHRI---LLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGF 215 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~~~~~~~---~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~ 215 (238)
| .+.|+++|..+.... .... ...++.... ...|..+..+|.|.|+|.|.|....
T Consensus 165 ~~~v~W~k~g~~~~~~~-~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 165 DINVKWKIDGSERQNGV-LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp CEEEEEEEC-----CCE-EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred ceEEEEEECCeeCCCCc-eEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 3 799999998775320 0111 012333221 2224555778999999999997644
No 246
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.36 E-value=7.7e-12 Score=94.32 Aligned_cols=95 Identities=17% Similarity=0.276 Sum_probs=69.9
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
+|.|...+.+..+.+|+++.|.|.+.+.|.|.+.|++++..+............++.|. |..++.+|+|.|+|.+.
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~----i~~~~~~d~G~Y~C~~~ 77 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ----ILNINKSDEGIYRCEGR 77 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEE----ETTCCGGGCEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEE----EeeCCHhHCcEEEEEEE
Confidence 67888888899999999999999999999999999999988765434444555566665 56679999999999999
Q ss_pred eCCCce-eEEEEEEEEccCC
Q psy18191 211 NELGFA-RSKNATLDVAGKI 229 (238)
Q Consensus 211 N~~G~~-~s~~~~L~V~~~~ 229 (238)
|..+.. ....+.|.|..++
T Consensus 78 ~~~~~~~~~~~~~l~v~~~p 97 (189)
T 2v5t_A 78 VEARGEIDFRDIIVIVNVPP 97 (189)
T ss_dssp ETTTTEEEEEEEEEEEEEEE
T ss_pred EcCCCceEEEEEEEEecCCC
Confidence 998543 2235566665443
No 247
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.36 E-value=2.8e-12 Score=99.82 Aligned_cols=97 Identities=28% Similarity=0.438 Sum_probs=74.8
Q ss_pred ccCCEEEeCC----CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCcc--EEEecCCcEEEEEeecCCCCCCC
Q psy18191 129 YRVPRITEHP----ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSH--RILLPAGSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 129 ~~~P~i~~~~----~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~--~~~~~~~~l~~~~vi~~v~~~d~ 202 (238)
..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+....... ........|. |..++.+|+
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~~~~~d~ 88 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLI----MESVVPSDK 88 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEE----ECSCCGGGC
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEE----EecCCcccC
Confidence 3567776554 67889999999999999999999999999999887542211 2223334454 566699999
Q ss_pred eEEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 203 GVYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 203 G~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
|.|+|.|.|..|... ..+.|.|...+.
T Consensus 89 G~Y~C~~~n~~~~~~-~~~~l~V~~~~~ 115 (231)
T 3ojm_B 89 GNYTCVVENEYGSIN-HTYHLDVVERSR 115 (231)
T ss_dssp EEEEEEEEETTEEEE-EEEEEEEECCCC
T ss_pred EEEEEEEecccCccc-ccEEEEEEcCCC
Confidence 999999999999986 588999876543
No 248
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.36 E-value=1.4e-12 Score=101.60 Aligned_cols=129 Identities=13% Similarity=0.153 Sum_probs=76.8
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~ 160 (238)
.|.|.++..+|+|.|.|...+.. |..... .......+. +......+|.+...+....+.+|+.+.|.|.+.|. |.
T Consensus 82 ~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~-~~~~~~~l~-V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 157 (222)
T 1q9r_B 82 YLQMNTLRAEDSATYYCARDHDG--YYERFS-YWGQGTLVT-VSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPE 157 (222)
T ss_dssp EEEECSCCGGGCEEEEEEECCCS--SCCSCC-CBCCCEEEE-ECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSS
T ss_pred EEEECcCCcccCeEEEEEEeccC--Ccccce-EeCCceEEE-eccCCCCCCeEEEccccccccCCCcEEEEEEEccEECC
Confidence 57788888888888887665531 100000 000011111 11112346776654333345689999999999986 88
Q ss_pred C-EEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 161 P-RIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
| .+.|+++|..+... .......++...+ .+.|..+...| |.|+|.|.|..|...
T Consensus 158 p~~v~W~~~g~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~ 214 (222)
T 1q9r_B 158 PVTVTWNSGSLSSGVH--TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTK 214 (222)
T ss_dssp CCEEEEGGGTBCTTEE--EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred CCEEEEecCCeEcceE--eccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCc
Confidence 8 99999998765321 1111112332221 22366678889 999999999998864
No 249
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.36 E-value=3.9e-12 Score=109.23 Aligned_cols=154 Identities=10% Similarity=0.008 Sum_probs=87.3
Q ss_pred CCc-cEEEecccccccc--------ce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCc--ce---ecc
Q psy18191 62 PKP-ICLRFQDLLPQSK--------QG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSL--PL---FPG 123 (238)
Q Consensus 62 ~~~-~~~w~~~~~~~~~--------~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~--~~---~~~ 123 (238)
|.+ .+.|++++..... .+ ...|.+..+..+| |.|+|.+.+................ .. ...
T Consensus 152 P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~ 230 (444)
T 1igt_B 152 PEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKC 230 (444)
T ss_dssp SSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSC
T ss_pred CCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCcccc
Confidence 455 8999998764211 12 1246666777677 8888776653221000001000000 00 000
Q ss_pred eecCCccCCEE-EeCCCceE-EeCCCcEEEEEEEeeeC----CCEEEEEeCCEEeeccCCccEEEecCCcE--EEEEeec
Q psy18191 124 VHGDGYRVPRI-TEHPASAV-VPRHEPTTLNCKADGYP----EPRIEWYKDGSLVSAEIGSHRILLPAGSL--FFLSLVH 195 (238)
Q Consensus 124 ~~~~v~~~P~i-~~~~~~~~-~~~G~~~~L~C~~~g~P----~p~i~W~~~g~~l~~~~~~~~~~~~~~~l--~~~~vi~ 195 (238)
....+..+|.+ ...|.... +.+|+++.|.|.+.|.| .+.++|++++..+............++.. ...+.|.
T Consensus 231 ~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 310 (444)
T 1igt_B 231 PAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQ 310 (444)
T ss_dssp CCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECC
T ss_pred CCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEc
Confidence 00112346776 44443333 58899999999999984 36999999998875431111122223321 1122366
Q ss_pred CCCCCCCeEEEEEEEeCCCce
Q psy18191 196 GKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
.+..+|.|.|+|.|.|..|..
T Consensus 311 ~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 311 HQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp HHHHHTTCEEEEEEECTTCSS
T ss_pred HHHhccCCcEEEEEEcCCCCC
Confidence 668999999999999999876
No 250
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.35 E-value=1.1e-11 Score=104.16 Aligned_cols=94 Identities=27% Similarity=0.373 Sum_probs=71.7
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEEeeccC---CccEEEecC---CcEEEEEeecCCCCCCC
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSLVSAEI---GSHRILLPA---GSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~l~~~~---~~~~~~~~~---~~l~~~~vi~~v~~~d~ 202 (238)
+|.|.. +.+..+.+|+++.|.|.+.|.|.|.+.|+++ |..+.... ..+...... +.|. |..+..+|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~D~ 75 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLH----IKDVKLSDS 75 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEE----EESCCGGGC
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEE----EcccChhhC
Confidence 577776 5667888899999999999999999999999 88876421 122222211 2333 667799999
Q ss_pred eEEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 203 GVYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 203 G~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
|.|+|.|.|..|... ..+.|.|..+|.
T Consensus 76 G~Y~C~a~n~~g~~~-~~~~l~V~~~P~ 102 (389)
T 2jll_A 76 GRYDCEAASRIGGHQ-KSMYLDIEYAPK 102 (389)
T ss_dssp EEEEEEEECSSCEEE-EEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCCcc-eEEEEEEEeCCE
Confidence 999999999999985 699999976553
No 251
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.35 E-value=7.3e-12 Score=107.75 Aligned_cols=99 Identities=24% Similarity=0.400 Sum_probs=74.3
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC-EEeeccCC-ccEEEecCCcEEEEEeecCCCCCCCeEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG-SLVSAEIG-SHRILLPAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g-~~l~~~~~-~~~~~~~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
...+|.+...+....+.+|+++.|.|.+ +.|.|.+.|++++ ..+..... .+.....+++|. |..++.+|+|.|
T Consensus 338 ~C~~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~----I~~v~~~D~G~Y 412 (440)
T 3zyj_A 338 TCYAPVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLN----FTNVTVQDTGMY 412 (440)
T ss_dssp CCCCCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTCCEE----ESSCCSTTCEEE
T ss_pred cCCCCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCCeEE----EccCChhhCEEE
Confidence 3457888888889999999999999999 6799999999954 44433211 233445677776 566699999999
Q ss_pred EEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 206 WCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 206 ~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
+|.|.|..|... .++.+.|.+.+.++
T Consensus 413 ~C~a~N~~G~~~-~~~~~~v~~~~~~~ 438 (440)
T 3zyj_A 413 TCMVSNSVGNTT-ASATLNVTGTHHHH 438 (440)
T ss_dssp EEEEECSSCEEE-EEEEEEEC------
T ss_pred EEEEEcCCCcEE-EEEEEEEecccccc
Confidence 999999999997 59999999888765
No 252
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.35 E-value=4.2e-12 Score=96.02 Aligned_cols=93 Identities=31% Similarity=0.513 Sum_probs=71.5
Q ss_pred CCEEEeCCC--ceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 131 VPRITEHPA--SAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 131 ~P~i~~~~~--~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
||.|...+. +..+.+|+.+.|.|.+.|.|.|.+.|++++..+... ........+..|. |..++.+|+|.|+|.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~L~----i~~~~~~d~G~Y~C~ 76 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-EKYILKGSNTELT----VRNIINSDGGPYVCR 76 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCS-SSEEEETTTTEEE----ECSCCGGGCEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCC-ccEEEeCCeeEEE----EecCChhcCcEEEEE
Confidence 677776544 467789999999999999999999999999988753 2222222233454 566699999999999
Q ss_pred EEeCCCceeEEEEEEEEccCC
Q psy18191 209 ARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~ 229 (238)
+.|..|... ..+.|.|..++
T Consensus 77 ~~~~~~~~~-~~~~l~V~~~p 96 (192)
T 2va4_A 77 ATNKAGEDE-KQAFLQVFVQP 96 (192)
T ss_dssp EEETTEEEE-EEEEEEEEEEE
T ss_pred EEccccccc-eEEEEEEEccC
Confidence 999999886 58888886554
No 253
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.34 E-value=2.7e-12 Score=109.63 Aligned_cols=127 Identities=13% Similarity=0.160 Sum_probs=79.1
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEee-eC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADG-YP 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g-~P 159 (238)
..|.|.++..+|+|.|+|.+.+... .. . .....+. ......+|.+...+......+|+.+.|.|.+.| .|
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~a~n~~~--~~---~--~~~~~l~--V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p 145 (438)
T 1qgc_4 75 FTLTIDPVEADDVATYYCQQSNEVP--LT---F--GAGTKLD--LKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYP 145 (438)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSTT--CC---B--CCCEEEE--ECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBS
T ss_pred EEEEeCCCcCcCCeeEEEEEecCCC--cc---c--cCceeEE--ecCCCCCCEEEecCCChhhccCCceEEEEEEccccC
Confidence 4688889999999999987776421 00 0 0001111 111234777766443333346889999999987 67
Q ss_pred CC-EEEEEeCCEEeeccC-CccEEE-ecCCcEE--EEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 160 EP-RIEWYKDGSLVSAEI-GSHRIL-LPAGSLF--FLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 160 ~p-~i~W~~~g~~l~~~~-~~~~~~-~~~~~l~--~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
.| .+.|+++|..+.... ...... ..++... ..+.|..+..+|+|.|+|.|.|..|..
T Consensus 146 ~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 207 (438)
T 1qgc_4 146 KDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 207 (438)
T ss_dssp SCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred CCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC
Confidence 77 899999999886420 000111 1223221 122355668899999999999998875
No 254
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.34 E-value=4.9e-12 Score=100.20 Aligned_cols=146 Identities=14% Similarity=0.079 Sum_probs=82.5
Q ss_pred CCc-cEEEeccccccccc--------------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceec
Q psy18191 62 PKP-ICLRFQDLLPQSKQ--------------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHG 126 (238)
Q Consensus 62 ~~~-~~~w~~~~~~~~~~--------------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~ 126 (238)
|.+ .+.||+++...... +...|.+..+..+|+|.|+|.+.+......... .+. ...
T Consensus 48 P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~--------~v~-~~~ 118 (239)
T 1i1c_A 48 DPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPAPIEK--------SIS-KPE 118 (239)
T ss_dssp CCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSSCEEE--------EEC-CCS
T ss_pred CCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCCCcEE--------EEe-cCC
Confidence 434 79999987533210 112455666666677777766554321100000 000 001
Q ss_pred CCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC-CEEEEEeCCEEeeccCCccEEEecCCcEEEEEe--ecCCCCCCC
Q psy18191 127 DGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE-PRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSL--VHGKKDTDS 202 (238)
Q Consensus 127 ~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~v--i~~v~~~d~ 202 (238)
.+..+|.+...+.......|+.+.|.|.+.|. |. ..+.|+++|..+............+|++.+... +......|.
T Consensus 119 ~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~ 198 (239)
T 1i1c_A 119 GTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQG 198 (239)
T ss_dssp SCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTT
T ss_pred CCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCC
Confidence 35578887665443322358899999999985 44 389999999987532111112234566655432 211123468
Q ss_pred eEEEEEEEeCCCce
Q psy18191 203 GVYWCVARNELGFA 216 (238)
Q Consensus 203 G~Y~C~a~N~~G~~ 216 (238)
|.|+|.|.|.....
T Consensus 199 g~YtC~v~n~~l~~ 212 (239)
T 1i1c_A 199 NTFTCSVLHEGLEN 212 (239)
T ss_dssp CCEEEEEECTTSGG
T ss_pred CEEEEEEECCCCCC
Confidence 99999999987554
No 255
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.34 E-value=1.6e-12 Score=103.36 Aligned_cols=126 Identities=12% Similarity=0.121 Sum_probs=75.5
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~ 160 (238)
.|.|.++..+|+|.|.|.+.+.. +. ... ....+. +.....+|.+...+....+.+|+.+.|.|.+.|. |.
T Consensus 110 ~L~I~~v~~~D~G~Y~C~~~~~~--~~---~~~--~~~~l~--V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~ 180 (252)
T 3bkj_L 110 TLRISRVEAEDLGVYYCFQASLV--PL---TFG--AGTKLE--LKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK 180 (252)
T ss_dssp EEEESSCCGGGCEEEEEEECSBS--SC---EEC--CCEEEE--ECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSS
T ss_pred EEEECCCCcccCEEEEEEEEcCC--cc---EEC--CCEEEE--EeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCC
Confidence 67888888899999997766531 10 000 001111 1112346777664443334478999999999885 44
Q ss_pred C-EEEEEeCCEEeecc-CC-ccEEEecCCcEE--EEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 161 P-RIEWYKDGSLVSAE-IG-SHRILLPAGSLF--FLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~-~~-~~~~~~~~~~l~--~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
| .+.|+++|..+... .. .......++... ....|..+..+|+|.|+|.|.|.....
T Consensus 181 ~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 181 DINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp CCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 4 79999999987632 00 000111233321 112255557889999999999987654
No 256
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.33 E-value=7.8e-13 Score=103.64 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=75.8
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCC-
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPE- 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~- 160 (238)
.|.+.++..+|+|.|.|.+.+.. |... ..... ..+. +......+|.+...+.......|+.+.|.|.+.|.++
T Consensus 92 ~L~I~~v~~~D~G~Y~C~~~~~~--~~~~-~~~~~--~~l~-V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~ 165 (234)
T 2j6e_L 92 SLAISGLRSEDEADYYCATWDDS--LSAV-IFGGG--TKLT-VLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPG 165 (234)
T ss_dssp EEEEESCCSTTCSEEEEEEEETT--TTEE-EECCC--BCCC-BCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSC
T ss_pred EEEECCCCHHHCEEEEEEEEcCC--ccee-EecCC--EEEE-EecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCC
Confidence 67888899999999997766531 1100 00000 1111 1011124566654333333346889999999988644
Q ss_pred -CEEEEEeCCEEeeccCCcc-EEEecCCcE--EEEEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 161 -PRIEWYKDGSLVSAEIGSH-RILLPAGSL--FFLSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 161 -p~i~W~~~g~~l~~~~~~~-~~~~~~~~l--~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
+.++|+++|..+....... .....++.. .....|..+..+|.|.|+|.|.|..+...
T Consensus 166 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 226 (234)
T 2j6e_L 166 AVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 226 (234)
T ss_dssp CCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCC
T ss_pred ceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceE
Confidence 3899999999886420000 001122221 11222566688899999999999987764
No 257
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.33 E-value=4.4e-12 Score=100.24 Aligned_cols=129 Identities=13% Similarity=0.144 Sum_probs=77.0
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce-ecCCccCCEEEe-CCCceEEeCCCcEEEEEEEeee
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV-HGDGYRVPRITE-HPASAVVPRHEPTTLNCKADGY 158 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~-~~~v~~~P~i~~-~~~~~~~~~G~~~~L~C~~~g~ 158 (238)
..|.|.++.++|+|.|.|.+.+... .+.-..... ..+... ......+|.+.. .+....+.+|+.+.|.|.+.|.
T Consensus 77 ~~L~I~~v~~~D~G~Y~C~~~~~~~--~~~~~~~~~--~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~ 152 (246)
T 4dzb_B 77 STLTVTSAHPEDSSFYICSARTSGD--FGEQFFGPG--TRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF 152 (246)
T ss_dssp EEEEECSCCGGGCEEEEEEECCSSG--GGCCEECCC--EEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE
T ss_pred EEEEECCCCHHHCEEEEEEEecCCC--CcceEEcCC--EEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccC
Confidence 3688889999999999977664211 000011000 111100 000224666643 4555556679999999999998
Q ss_pred CCC--EEEEEeCCEEeeccCCccEEEe---------cCCcEEEE--EeecCCCCCC-CeEEEEEEEeCCCce
Q psy18191 159 PEP--RIEWYKDGSLVSAEIGSHRILL---------PAGSLFFL--SLVHGKKDTD-SGVYWCVARNELGFA 216 (238)
Q Consensus 159 P~p--~i~W~~~g~~l~~~~~~~~~~~---------~~~~l~~~--~vi~~v~~~d-~G~Y~C~a~N~~G~~ 216 (238)
|+| .+.|+++|..+... ..... .++.+.+. ..|.....+| .|.|+|.|.|.....
T Consensus 153 ~p~~~~v~W~k~g~~l~~~---~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~ 221 (246)
T 4dzb_B 153 YPDHVELSWWVNGKEVHSG---VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 221 (246)
T ss_dssp BSSCEEEEEEETTEEECTT---EEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred cCCceEEEEEECCEECCCC---cccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCC
Confidence 765 89999999988642 11110 24444321 2244445667 999999999987654
No 258
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.33 E-value=4.8e-12 Score=97.72 Aligned_cols=147 Identities=17% Similarity=0.229 Sum_probs=78.2
Q ss_pred ccEEEeccccccccceEEEEEcCCCCCCCCCceEEEeC---CCcc---cCCceEEeCCCCcce-ec-ceec--CCccCCE
Q psy18191 64 PICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNN---KTWQ---KGLPLKKYHPPSLPL-FP-GVHG--DGYRVPR 133 (238)
Q Consensus 64 ~~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~---~~~~---~G~y~c~~~~~~~~~-~~-~~~~--~v~~~P~ 133 (238)
..+.||+++.++.... . ........|.|.+... ...+ .|.|.|.+.+..... .. .+.. .+..+|.
T Consensus 37 ~~v~W~k~~~~~~~~~-~----~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~ 111 (207)
T 1l6x_A 37 VKFNWYVDGVEVHNAK-T----KPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQ 111 (207)
T ss_dssp CEEEEEETTEEECCCE-E----CCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCE
T ss_pred eEEEEEECCccccCcc-c----CCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcceEEEeccCCCCCcCCE
Confidence 4899999987543211 0 0000112344443211 1112 566666555443321 11 1111 3456788
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeee-CC-CEEEEEeCCEEeeccCCccEEEecCCcEEEEEe--ecCCCCCCCeEEEEEE
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGY-PE-PRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSL--VHGKKDTDSGVYWCVA 209 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~v--i~~v~~~d~G~Y~C~a 209 (238)
+...+.......|+.+.|.|.+.|. |. +.+.|+++|..+............+|.+.+... +......|.|.|+|.|
T Consensus 112 v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a 191 (207)
T 1l6x_A 112 VYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSV 191 (207)
T ss_dssp EEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEE
T ss_pred EEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEE
Confidence 7654332222346669999999986 44 389999999987632111112234566554432 2222335799999999
Q ss_pred EeCCCc
Q psy18191 210 RNELGF 215 (238)
Q Consensus 210 ~N~~G~ 215 (238)
.|....
T Consensus 192 ~n~~l~ 197 (207)
T 1l6x_A 192 MHEALH 197 (207)
T ss_dssp ECTTSG
T ss_pred EcCCcC
Confidence 998754
No 259
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.33 E-value=4.6e-12 Score=98.22 Aligned_cols=135 Identities=11% Similarity=0.100 Sum_probs=74.8
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPE 160 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~ 160 (238)
..|.|.++.++|+|.|.|...+.. +...-... ....+. +......+|.+...+....+..|+.+.|.|.+.|.|+
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~~--~~~~l~-V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p 149 (215)
T 3nl4_H 75 VDLKITSPTTEDTATYFCVRKYGS--EWGGDLWG--PGTLVT-VSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLP 149 (215)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSS--SSCEEEEC--CCEEEE-ECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBS
T ss_pred EEEEECCCCcccCEEEEEEEecCC--CccceEEc--CCEEEE-EeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeC
Confidence 357788888888888887665531 10000011 111111 1112335777764433345567999999999998754
Q ss_pred C--EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEE
Q psy18191 161 P--RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLD 224 (238)
Q Consensus 161 p--~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~ 224 (238)
+ .+.|+++|..+... ........++.+.+...+ .+...| |.|+|.|.|..|... ....|.
T Consensus 150 ~~~~v~W~~~g~~~~~~-~~~~~~~~~g~~~~~s~l-~v~~~d-g~ytC~v~~~~~~~~-~~~~l~ 211 (215)
T 3nl4_H 150 EPVTVTWNSGTLTNGVR-TFPSVRQSSGLYSLSSVV-SVTSSS-QPVTCNVAHPATNTK-VDKTVA 211 (215)
T ss_dssp SCCEEEEGGGTBCTTEE-ECCCEECTTSCEEEEEEE-EECC----CCEEEEEEGGGTEE-EEEECC
T ss_pred CCeEEEEeeCCEECCeE-ecCceECCCCCEEEEEEE-EEeccC-CEEEEEEEeCCCCcc-eEEecC
Confidence 3 57799998754322 111223345666652211 126777 999999999998774 355554
No 260
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.33 E-value=1.7e-11 Score=92.72 Aligned_cols=97 Identities=19% Similarity=0.362 Sum_probs=71.2
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeC-CCEEEEEe-CCEEeeccCCccEEEec-CCcEEEEEeecCCCCCCCeEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYP-EPRIEWYK-DGSLVSAEIGSHRILLP-AGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P-~p~i~W~~-~g~~l~~~~~~~~~~~~-~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
++.+...|.+..+.+|+++.|.|.+.+.| .+.+.|++ +|..+............ .+...+ .|..+..+|+|.|+|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L--~i~~~~~~d~G~Y~C 79 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTL--TIYNANIDDAGIYKC 79 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEE--EECSCCGGGCEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEE--EEccCCcccCEEEEE
Confidence 45677778889999999999999999987 89999999 88887743222222211 222222 267779999999999
Q ss_pred EEEeCCCceeEEEEEEEEccCC
Q psy18191 208 VARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|.|..|...+..+.|.|..++
T Consensus 80 ~~~~~~~~~~~~~~~l~v~~~p 101 (191)
T 1epf_A 80 VVTAEDGTQSEATVNVKIFQKL 101 (191)
T ss_dssp EEEETTTEEEEEEEEEEEECCS
T ss_pred EEEcCCCcceEEEEEEEeecCc
Confidence 9999995544568888887654
No 261
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.32 E-value=1.1e-12 Score=100.27 Aligned_cols=93 Identities=19% Similarity=0.283 Sum_probs=68.9
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEe---cCCcEEEEEeecCCCCCCCeEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILL---PAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~---~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
..+|.|...|.. .+.+|+++.|.|.+.+ |.+.+.|+|+|..+... ..... ..+.|. |..++.+|+|.|
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~---~~~~~~~~~~~~L~----i~~v~~~D~G~Y 73 (196)
T 3p2t_A 3 LPKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWD---RQNPLEPKNKARFS----IPSMTEDYAGRY 73 (196)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSE---EECCCSSSSEEEEE----ESSCCGGGCEEE
T ss_pred CCCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccc---ccccccCCceEEEE----eccCCcccCceE
Confidence 357888887777 8899999999999988 77899999999876531 11111 112232 677899999999
Q ss_pred EEEEEeCCCc-eeEEEEEEEEccCCC
Q psy18191 206 WCVARNELGF-ARSKNATLDVAGKIS 230 (238)
Q Consensus 206 ~C~a~N~~G~-~~s~~~~L~V~~~~~ 230 (238)
+|.|.|..|. ..+..+.|.|...+.
T Consensus 74 ~C~a~n~~g~~~~s~~~~l~V~~~~~ 99 (196)
T 3p2t_A 74 RCYYRSPVGWSQPSDPLELVMTGAYS 99 (196)
T ss_dssp EEEEEETTEEBCCCCCEEEEEECSSC
T ss_pred EEEEeCCCcccCCCccEEEEecCCCC
Confidence 9999999983 334578888875543
No 262
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.31 E-value=9.2e-12 Score=90.85 Aligned_cols=91 Identities=13% Similarity=0.215 Sum_probs=65.1
Q ss_pred eCCCceEEeCCCcEEEEEEEeeeCCCEEEEEe---------CCEEeeccCCccEEEe--cCCcEEEEEeecCCCCCCCeE
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGYPEPRIEWYK---------DGSLVSAEIGSHRILL--PAGSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~---------~g~~l~~~~~~~~~~~--~~~~l~~~~vi~~v~~~d~G~ 204 (238)
..|..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+. ..+.... ..+.. .+.|..++.+|+|.
T Consensus 43 ~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~---~~r~~~~~~~~~~~--~L~I~~v~~~DsG~ 117 (145)
T 1z9m_A 43 PWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR---DNRIQLVTSTPHEL--SISISNVALADEGE 117 (145)
T ss_dssp CBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC---CTTEEEEEECSSEE--EEEECSCCGGGCEE
T ss_pred cCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc---cCCEEEecCCCCeE--EEEECCCChhhCEE
Confidence 34677899999999999999999999999994 332222 1222111 11122 22378889999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEccCCCCCC
Q psy18191 205 YWCVARNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
|+|.|.|. |... ..+.|.|..+|.+|.
T Consensus 118 Y~C~~~n~-~~~~-~~~~L~V~~~P~~P~ 144 (145)
T 1z9m_A 118 YTCSIFTM-PVRT-AKSLVTVLGIPQKPI 144 (145)
T ss_dssp EEEEECSS-SCEE-EEEEEEEECCCC---
T ss_pred EEEEEEcC-CCce-EEEEEEEEeCCCCCc
Confidence 99999999 8875 599999998877653
No 263
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.31 E-value=4e-12 Score=109.14 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=84.9
Q ss_pred CccEEEeccccccccc--------------eEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceec--
Q psy18191 63 KPICLRFQDLLPQSKQ--------------GLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHG-- 126 (238)
Q Consensus 63 ~~~~~w~~~~~~~~~~--------------g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~-- 126 (238)
.+.+.|++++..+... ....|.+..+..+|+|.|+|.+.+... .... . ..+..
T Consensus 273 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~--~~~~--------~-~~v~~~~ 341 (444)
T 1igt_B 273 DVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDL--PAPI--------E-RTISKPK 341 (444)
T ss_dssp CCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTC--SSCE--------E-EEEECCC
T ss_pred CeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCC--CCce--------E-EEEeccC
Confidence 3589999988644221 123577777888888888887766322 1100 0 11111
Q ss_pred CCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEe--ecCCCCCCC
Q psy18191 127 DGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSL--VHGKKDTDS 202 (238)
Q Consensus 127 ~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~v--i~~v~~~d~ 202 (238)
.+..+|.+...+.......++.+.|.|.+.|. |.| .++|+++|..+............+|.+.+... +.....+|.
T Consensus 342 ~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~ 421 (444)
T 1igt_B 342 GSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVER 421 (444)
T ss_dssp CCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTC
T ss_pred CCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCC
Confidence 35578887654432212234459999999985 555 89999999987432111112234565544322 333345569
Q ss_pred eEEEEEEEeCCCc
Q psy18191 203 GVYWCVARNELGF 215 (238)
Q Consensus 203 G~Y~C~a~N~~G~ 215 (238)
|.|+|.|.|..-.
T Consensus 422 g~YtC~a~n~~l~ 434 (444)
T 1igt_B 422 NSYSCSVVHEGLH 434 (444)
T ss_dssp CCEEEEEECTTSG
T ss_pred CeEEEEEECCCcC
Confidence 9999999997643
No 264
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.31 E-value=1.4e-11 Score=97.95 Aligned_cols=74 Identities=15% Similarity=0.347 Sum_probs=48.1
Q ss_pred CceEEeCCCcEEEEEEEeeeC--CCEEEEEeC--CEEeec----c-----------CCccEEEe-cCCcEEEEEeecCCC
Q psy18191 139 ASAVVPRHEPTTLNCKADGYP--EPRIEWYKD--GSLVSA----E-----------IGSHRILL-PAGSLFFLSLVHGKK 198 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~--g~~l~~----~-----------~~~~~~~~-~~~~l~~~~vi~~v~ 198 (238)
....+.+|+++.|.|.+.+.| .+.+.|+++ +..+.. . ...+.... ........+.|..++
T Consensus 142 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 221 (256)
T 3ux9_B 142 GGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLR 221 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCC
Confidence 446689999999999999877 789999986 322210 0 00111111 111111122378889
Q ss_pred CCCCeEEEEEEEeC
Q psy18191 199 DTDSGVYWCVARNE 212 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~ 212 (238)
.+|+|.|.|.|.|.
T Consensus 222 ~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 222 AEDTAVYYCARYID 235 (256)
T ss_dssp GGGCEEEEEEEEET
T ss_pred hhhCEEEEEEEEcC
Confidence 99999999999996
No 265
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.31 E-value=2.8e-11 Score=107.54 Aligned_cols=95 Identities=19% Similarity=0.264 Sum_probs=77.7
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
....|.+...+.+..+.+|+.+.|.|.+.|.|.|.++|++++..|..+ ....+...++. .. +.|..+..+|+|.|+|
T Consensus 479 ~~~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s-~~~~i~~~~~~-~~-L~I~~~~~~D~G~Yt~ 555 (573)
T 3uto_A 479 SEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQS-VKYMKRYNGND-YG-LTINRVKGDDKGEYTV 555 (573)
T ss_dssp GGGSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSS-SSEEEEEETTE-EE-EEECSCCGGGCEEEEE
T ss_pred cccCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccC-CcEEEEEcCCE-EE-EEEcCCCcccCcEEEE
Confidence 446788888888999999999999999999999999999999999753 22333333443 32 2478889999999999
Q ss_pred EEEeCCCceeEEEEEEEEc
Q psy18191 208 VARNELGFARSKNATLDVA 226 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~ 226 (238)
.|.|..|+.+ ..+.|.|.
T Consensus 556 ~A~N~~G~~~-~~v~l~Vt 573 (573)
T 3uto_A 556 RAKNSYGTKE-EIVFLNVT 573 (573)
T ss_dssp EEEETTEEEE-EEEEEEEC
T ss_pred EEEeCCCcEE-EEEEEEEC
Confidence 9999999997 59999873
No 266
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.31 E-value=2e-11 Score=96.60 Aligned_cols=125 Identities=15% Similarity=0.175 Sum_probs=69.6
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee------------cCCccCCEEEeCCCceEEeCCCcE
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH------------GDGYRVPRITEHPASAVVPRHEPT 149 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~------------~~v~~~P~i~~~~~~~~~~~G~~~ 149 (238)
.|.|.++..+|+|.|.|.+.+... . .......+.+.... .....++.+...+....+.+|+++
T Consensus 75 ~L~I~~v~~~D~G~Y~C~~~n~~~--~---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v 149 (250)
T 3esu_F 75 SLTISNLEQEDIGTYFCQQGNTLP--W---TFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASV 149 (250)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSS--C---EECCCEEEEEC------------------------CEECCCEEECTTCCE
T ss_pred EEEEccCChhhCEEEEEEEeeCCC--c---eECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceE
Confidence 688889999999999987765321 0 00000000000000 000012333344566789999999
Q ss_pred EEEEEEeeeC--CCEEEEEeC--CEEeecc---------------CCccEEEecCC-cEEEEEeecCCCCCCCeEEEEEE
Q psy18191 150 TLNCKADGYP--EPRIEWYKD--GSLVSAE---------------IGSHRILLPAG-SLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 150 ~L~C~~~g~P--~p~i~W~~~--g~~l~~~---------------~~~~~~~~~~~-~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.|.|.+.+.| .|.+.|+++ +..+..- ...+.....++ .....+.|..++.+|+|.|.|.|
T Consensus 150 ~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 229 (250)
T 3esu_F 150 KISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCAR 229 (250)
T ss_dssp EEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEE
Confidence 9999998877 789999997 4332110 00111111110 11112337888999999999999
Q ss_pred Ee
Q psy18191 210 RN 211 (238)
Q Consensus 210 ~N 211 (238)
.|
T Consensus 230 ~~ 231 (250)
T 3esu_F 230 SG 231 (250)
T ss_dssp EC
T ss_pred ec
Confidence 98
No 267
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.31 E-value=4.5e-12 Score=99.37 Aligned_cols=140 Identities=14% Similarity=0.186 Sum_probs=75.2
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-C
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-P 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P 159 (238)
..|.|.++..+|+|.|.|...+... -.+. ....+. +......+|.+...+....+..|+.+.|.|.+.|. |
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~-----~~~~--~~~~L~-V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P 150 (227)
T 1mju_H 79 AYMQLSSLTSDDSAVYYCANKLGWF-----PYWG--QGTLVT-VSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFP 150 (227)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTE-----EEEC--CCEEEE-ECSSCCBCCEEEEECCCC------CEEEEEEEEEEBS
T ss_pred EEEEECCCCcccCEEEEEEECCCCc-----eEEc--CcEEEE-EcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeC
Confidence 3577778888888888866554210 0000 011111 11111245666543323456789999999999986 7
Q ss_pred CC-EEEEEeCCEEeeccCCccEEEecCCcEE--EEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 160 EP-RIEWYKDGSLVSAEIGSHRILLPAGSLF--FLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 160 ~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~--~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
.| .+.|++++..+......... .++... ....|..+..+| |.|+|.|.|..+... ....+.+.++|..+
T Consensus 151 ~p~~v~W~~~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~-~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 151 EPVTLTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK-VDKKIEPRGPTIKP 222 (227)
T ss_dssp SCCEEEEGGGTBCTTEEECCCEE--ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEE-EEEECCCCCC----
T ss_pred CCeEEEEecCCCcCCcEECCcee--cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcc-eEEEeCCCCCCCCC
Confidence 77 99999998764321111111 123222 122356667677 999999999877664 46677776666543
No 268
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.30 E-value=1.1e-11 Score=93.96 Aligned_cols=87 Identities=24% Similarity=0.306 Sum_probs=67.1
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
+..+|.|...|.. .+.+|+++.|.|.+.+ |.+.+.|+|+|... ...++.|. |..++.+|+|.|+|
T Consensus 5 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~---------~~~~~~L~----i~~v~~~D~G~Y~C 69 (184)
T 2gi7_A 5 PLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR---------YQDQAVLF----IPAMKRSLAGRYRC 69 (184)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC---------EESSSEEE----ESSCCGGGCEEEEE
T ss_pred CCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc---------cCcccEEE----ECcCChhhCceEEE
Confidence 4568888887765 7899999999999988 88999999998641 12345554 66779999999999
Q ss_pred EEEeCCCc-eeEEEEEEEEccCC
Q psy18191 208 VARNELGF-ARSKNATLDVAGKI 229 (238)
Q Consensus 208 ~a~N~~G~-~~s~~~~L~V~~~~ 229 (238)
.|.|..|. ..+..+.|.|.+..
T Consensus 70 ~a~n~~g~~~~s~~~~l~V~~~~ 92 (184)
T 2gi7_A 70 SYQNGSLWSLPSDQLELVATGVF 92 (184)
T ss_dssp EEEETTEEBCCCCCEEEEEESSS
T ss_pred EEEcCCCccCCCCCEEEEecCcC
Confidence 99998874 22346788886543
No 269
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.30 E-value=3.5e-11 Score=91.09 Aligned_cols=62 Identities=15% Similarity=0.273 Sum_probs=45.9
Q ss_pred CCCcEEEEEEE-eeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEE
Q psy18191 145 RHEPTTLNCKA-DGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNAT 222 (238)
Q Consensus 145 ~G~~~~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~ 222 (238)
.++.+.|.|.+ .| |.|.+.|++++..+.. ..+..+. +. ..+|+|.|+|.|.|.+|...+ .+.
T Consensus 114 ~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~--------~~~~~l~----~~--~~~d~g~Y~C~a~N~~~~~~~-~~~ 176 (180)
T 2dru_A 114 ECSNATLTCEVLEG-TDVELKLYQGKEHLRS--------LRQKTMS----YQ--WTNLRAPFKCKAVNRVSQESE-MEV 176 (180)
T ss_dssp EGGGTEEEEECSSC-TTCEEEEEETTEEEEE--------ESSSEEE----EE--CSCCSSCEEEEEEETTEEEEE-EEC
T ss_pred cCCCEEEEEEeCCC-CCCEEEEEECCeECcC--------CCCCEEE----EE--EhhcCccEEEEEecCcCcccc-cee
Confidence 34679999999 66 9999999999988751 1122332 21 378999999999999998753 443
No 270
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.30 E-value=4.2e-11 Score=94.63 Aligned_cols=124 Identities=10% Similarity=0.111 Sum_probs=71.0
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCC-------------EEEeCCCceEEeCCC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVP-------------RITEHPASAVVPRHE 147 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P-------------~i~~~~~~~~~~~G~ 147 (238)
..|.|.++.++|+|.|.|.+.+... .. .. ....+. +..+| .+...+....+.+|+
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~n~~~--~~---~~--~~~~L~-----V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 138 (242)
T 2znx_A 71 FTLSINSVETEDFGMYFCQQSNSXP--YT---FG--GGTKLE-----ITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQ 138 (242)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSS--CE---EC--CCEEEE-----EC---------------CCEEEEECCSEECTTS
T ss_pred EEEEECCCChHHCEEEEEeEecCCc--eE---EC--CCEEEE-----EcCCCCCCcccccccccceeeecCCcceecCCC
Confidence 3578888888999999977665321 00 00 000111 11222 222333345689999
Q ss_pred cEEEEEEEeeeC--CCEEEEEeC--CEEee---c---cC-------CccEEEec--CCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 148 PTTLNCKADGYP--EPRIEWYKD--GSLVS---A---EI-------GSHRILLP--AGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 148 ~~~L~C~~~g~P--~p~i~W~~~--g~~l~---~---~~-------~~~~~~~~--~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
++.|.|.+.|.| .|.+.|+++ +..+. . .. ...++... .......+.|..++.+|+|.|.|.
T Consensus 139 ~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 218 (242)
T 2znx_A 139 TLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCA 218 (242)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred eEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEe
Confidence 999999999876 588999984 32221 0 00 01122111 111111223778899999999999
Q ss_pred EEeC--CCce
Q psy18191 209 ARNE--LGFA 216 (238)
Q Consensus 209 a~N~--~G~~ 216 (238)
|.|. +|..
T Consensus 219 a~~~~~fG~g 228 (242)
T 2znx_A 219 NXDGDYXGQG 228 (242)
T ss_dssp ETTSSCBCCC
T ss_pred ccCCcccCCC
Confidence 9984 5665
No 271
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.30 E-value=6.2e-12 Score=104.49 Aligned_cols=125 Identities=14% Similarity=0.191 Sum_probs=74.9
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-C
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-P 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P 159 (238)
..|.|.++..+|+|.|.|.+.+.. + ..... ..+. +......+|.+...+....+.+|+.+.|.|.+.|. |
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~n~~--~----~~~~~--~~l~-V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 149 (344)
T 1za6_B 79 AYVELSSLRSEDTAVYFCTRSLNM--A----YWGQG--TLVT-VSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 149 (344)
T ss_dssp EEEEECSCCGGGCEEEEEEETTTT--C----EECCC--EEEE-ECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBS
T ss_pred EEEEECCCCcccCEEEEEEEecCc--c----eecCc--EEEE-EecCCCCCCeEEEccccccccCCCcEEEEEEEeeEEC
Confidence 357788888888888887766521 1 11000 1111 11112246666544333445789999999999987 6
Q ss_pred C-CEEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 160 E-PRIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 160 ~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
. |.+.|+++|..+....... ....++.... .+.|..+..+| |.|+|.|.|..|..
T Consensus 150 ~~~~v~W~k~g~~~~~~~~~~-~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 150 EPVTVSWNSGALTSGVHTFPA-VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 207 (344)
T ss_dssp SCCCEEETTTTBCTTEEECCC-EECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTE
T ss_pred CCeEEEEecCCccCceeECCC-eECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 4 7999999987642110111 1122332221 22356666677 99999999999875
No 272
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.29 E-value=5.7e-11 Score=89.74 Aligned_cols=94 Identities=21% Similarity=0.412 Sum_probs=70.2
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEe-CCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYK-DGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~-~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
.+...+.+..+.+|+++.|.|.+.|.|. .+.|++ ++..+... .......++... ...|..+..+|+|.|+|.|.|
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~--~~~~~~~~~~~~-~L~i~~~~~~d~G~Y~C~~~~ 79 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST--QRVVVQKEGVRS-RLTIYNANIEDAGIYRCQATD 79 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCC--SSEEEEEETTEE-EEEECSCCGGGCEEEEEEEEC
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCC--ceEEEECCCCeE-EEEEccCCcccCeEEEEEEEe
Confidence 4566778889999999999999999887 999999 77766532 222222223111 123677899999999999999
Q ss_pred CCCceeEEEEEEEEccCCC
Q psy18191 212 ELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 212 ~~G~~~s~~~~L~V~~~~~ 230 (238)
..|...+..+.|.|..++.
T Consensus 80 ~~g~~~~~~~~l~v~~~p~ 98 (189)
T 2v44_A 80 AKGQTQEATVVLEIYQKLT 98 (189)
T ss_dssp TTSCEEEEEEEEEEECCCE
T ss_pred CCCCcEEEEEEEEEecCCc
Confidence 9998755688898877653
No 273
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.29 E-value=7.7e-11 Score=92.58 Aligned_cols=122 Identities=13% Similarity=0.202 Sum_probs=71.1
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc--cCCEEEeCCCceEEeCCCcEEEEEEEeeeC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY--RVPRITEHPASAVVPRHEPTTLNCKADGYP 159 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~--~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P 159 (238)
.|.|.++.++|+|.|+|.+.+... .. . .....+. +..... .++.+...+....+.+|+++.|.|.+.|.|
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~n~~~--~~---~--~~~~~l~-V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p 147 (240)
T 1moe_A 76 TLIIDPVEADDVATYYCQQTNEDP--YT---F--GGGTKLE-IKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFN 147 (240)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSS--CC---B--CCCEEEE-ECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSC
T ss_pred EEEEcCCChhhCEEEEEEEccCCc--ee---e--cCCEEEE-EecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCcc
Confidence 688889999999999987766321 10 0 0011111 111000 122344456778899999999999999887
Q ss_pred C--CEEEEEeC--CEEeec-------c--------CCccEEEe-cCCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 160 E--PRIEWYKD--GSLVSA-------E--------IGSHRILL-PAGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 160 ~--p~i~W~~~--g~~l~~-------~--------~~~~~~~~-~~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
. +.+.|+++ +..+.. . ...+.... ........+.|..++.+|+|.|.|.|.+
T Consensus 148 ~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 148 IKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp GGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 4 68999995 222110 0 01111111 1111111233788899999999999984
No 274
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.28 E-value=9.2e-12 Score=102.53 Aligned_cols=140 Identities=11% Similarity=0.087 Sum_probs=81.4
Q ss_pred cEEEeccc-ccccc---------ce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceec--CC
Q psy18191 65 ICLRFQDL-LPQSK---------QG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHG--DG 128 (238)
Q Consensus 65 ~~~w~~~~-~~~~~---------~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~--~v 128 (238)
.+.||+++ ..... .+ ...|.+..+..+|+|.|+|.+.+... +. ..... +.. .+
T Consensus 148 ~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~-~~---------~~~~~-v~~~~~~ 216 (323)
T 2wqr_A 148 QLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHL-PR---------ALMRS-TTKTSGP 216 (323)
T ss_dssp EEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTS-SS---------CEEEE-ECCCCSC
T ss_pred EEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCC-CC---------CeeeE-EEccCCC
Confidence 89999964 33221 11 12466777777788888876655321 10 00111 111 13
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeee-CCC-EEEEEeCCEEeeccCC--ccEEEecCCcEEE--EEeecCCCCCCC
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGY-PEP-RIEWYKDGSLVSAEIG--SHRILLPAGSLFF--LSLVHGKKDTDS 202 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~p-~i~W~~~g~~l~~~~~--~~~~~~~~~~l~~--~~vi~~v~~~d~ 202 (238)
..+|.+...+.......|+.+.|.|.+.|. |.+ .+.|+++|..+..... .......++...+ .+.|..+..+|.
T Consensus 217 ~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~ 296 (323)
T 2wqr_A 217 RAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQK 296 (323)
T ss_dssp CBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHC
T ss_pred CCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCC
Confidence 367776553222222339999999999985 443 7999999998864200 0011122333221 222455578899
Q ss_pred eEEEEEEEeCCCc
Q psy18191 203 GVYWCVARNELGF 215 (238)
Q Consensus 203 G~Y~C~a~N~~G~ 215 (238)
|.|+|.|.|..+.
T Consensus 297 g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 297 DEFICRAVHEAAS 309 (323)
T ss_dssp CCEEEEEECTTST
T ss_pred CEEEEEEEeCCCC
Confidence 9999999999877
No 275
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.28 E-value=2.3e-11 Score=94.78 Aligned_cols=129 Identities=15% Similarity=0.214 Sum_probs=76.7
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-C
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-P 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P 159 (238)
..|.|.++..+|+|.|.|...+.. + +.-.+. ....+. +......+|.+...+ ...+..|+.+.|.|.+.|. |
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~~~--~-~~~~~~--~~~~L~-V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P 151 (220)
T 2fbj_H 79 LYLQMSKVRSEDTALYYCARLHYY--G-YNAYWG--QGTLVT-VSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFP 151 (220)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETT--T-EEEEEC--CCEEEE-ECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBS
T ss_pred EEEEECCCChhhCEEEEEEEeccc--c-ccceec--CCEEEE-ecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEEC
Confidence 357777777788888876554321 1 000000 011111 111122467776544 3345789999999999887 7
Q ss_pred C--CEEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 160 E--PRIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 160 ~--p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
. +.+.|++++..+...... .....++...+ ...|..+...|.|.|+|.|.|..|..+
T Consensus 152 ~~~~~v~W~~~~~~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 152 SGTMNVTWGKSGKDITTVNFP-PALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CCCEEEEESCCCSSCEEEECC-CEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCcEEEEEecCCEecceEecC-ceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 6 799999998765321011 11223444332 223556677889999999999999985
No 276
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.28 E-value=6.1e-12 Score=97.79 Aligned_cols=131 Identities=15% Similarity=0.172 Sum_probs=75.6
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~ 160 (238)
.|.|.++...|+|.|.|...+.. |. .-.+. ....+. +......+|.+...+....+.+|+.+.|.|.+.|. |.
T Consensus 82 ~L~I~~v~~~D~G~Y~C~~~~~~--~~-~~~~~--~~~~l~-V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 155 (220)
T 1pz5_B 82 YLQMNNLRAEDTGIYYCTRGGAV--GA-MDYWG--QGTSVT-VSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPE 155 (220)
T ss_dssp EEEECSCCGGGCEEEEEEEECTT--SS-EEEEC--CCEEEE-ECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSS
T ss_pred EEEEccCCHHHCEEEEEEEecCC--cc-cceEC--CCEEEE-EccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCC
Confidence 67788888888888887665531 10 00000 011111 11112356776654434446789999999999988 88
Q ss_pred C-EEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCceeEEEEE
Q psy18191 161 P-RIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFARSKNAT 222 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~ 222 (238)
| .+.|++++..+......... . .+.... ...|..+..+| |.|+|.|.|..|... +++.
T Consensus 156 p~~v~W~~~~~~~~~~~~~~~~-~-~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~-~~~~ 216 (220)
T 1pz5_B 156 PVTVKWNYGALSSGVRTVSSVL-Q-SGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVD-LIKE 216 (220)
T ss_dssp CCEEEEGGGTCCTTEEECCCEE-E-TTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEE-EEEE
T ss_pred CeEEEEecCCcccceEEcCCcc-c-CCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEe-eeec
Confidence 9 99999988631100011111 1 122211 12245556555 999999999999875 3443
No 277
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.28 E-value=1.5e-11 Score=93.15 Aligned_cols=89 Identities=24% Similarity=0.367 Sum_probs=68.0
Q ss_pred cCCEEEeCCCceEEeC-CCcEEEEEEEeeeCC--CEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEE
Q psy18191 130 RVPRITEHPASAVVPR-HEPTTLNCKADGYPE--PRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~-G~~~~L~C~~~g~P~--p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
.||.|... ....+.+ |+++.|.|.+.+.|. +.+.|++++..+... ... ..++.|. |..+..+|+|.|+
T Consensus 2 ~~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~---~~~-~~~~~L~----i~~~~~~d~G~Y~ 72 (190)
T 2wv3_A 2 NEPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTAT---RKN-ASNMEYR----INKPRAEDSGEYH 72 (190)
T ss_dssp -CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTC---CBC-CSEEEEE----ESSCCGGGCEEEE
T ss_pred CCCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECccc---ceE-eccEEEE----EecCCcccCEEEE
Confidence 47888774 4566666 999999999999987 889999999988642 111 1223333 6777999999999
Q ss_pred EEEEeCCCceeEEEEEEEEccCC
Q psy18191 207 CVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|.|.|. |... ..+.|.|..+|
T Consensus 73 C~~~n~-~~~~-~~~~l~V~~~p 93 (190)
T 2wv3_A 73 CVYHFV-SAPK-ANATIEVKAAP 93 (190)
T ss_dssp EEEEET-TEEE-EEEEEEEECCC
T ss_pred EEEEeC-Cccc-ccEEEEEecCC
Confidence 999999 8775 58999987765
No 278
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.28 E-value=4e-12 Score=97.19 Aligned_cols=95 Identities=18% Similarity=0.244 Sum_probs=67.4
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..+|.|...|.. .+.+|+++.|.|.+.+.|. .+.|+|+|..+............++.|. |..++.+|+|.|+|.
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~----i~~v~~~D~G~Y~C~ 76 (196)
T 2d3v_A 3 LSKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFS----IPSMTEHHAGRYRCY 76 (196)
T ss_dssp CCBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEE----ESSCCGGGCEEEEEE
T ss_pred CCCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEE----eccCChhHCeEEEEE
Confidence 357888887764 7899999999999988765 9999999987642100000001112232 677899999999999
Q ss_pred EEeCCCce-eEEEEEEEEccCC
Q psy18191 209 ARNELGFA-RSKNATLDVAGKI 229 (238)
Q Consensus 209 a~N~~G~~-~s~~~~L~V~~~~ 229 (238)
|.|..|.. .+..+.|.|...+
T Consensus 77 a~n~~g~~~~s~~~~l~V~~~~ 98 (196)
T 2d3v_A 77 YYSPAGWSEPSDPLELVVTGFY 98 (196)
T ss_dssp EEETTEECBCCCCEEEEEECSS
T ss_pred EeCCCCcCCcCccEEEEecCCC
Confidence 99998753 2346788887743
No 279
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.27 E-value=5.1e-12 Score=98.64 Aligned_cols=94 Identities=18% Similarity=0.192 Sum_probs=67.9
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEE--ecCC--cEEEEEeecCCCCCCCe
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRIL--LPAG--SLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~--~~~~--~l~~~~vi~~v~~~d~G 203 (238)
+..+|.|...|. ..+.+|++++|.|.+.+ |.+.+.|+|+|..+... ..... ...+ .|. |..++.+|+|
T Consensus 6 ~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~--~~~~~~~~~~~~~~L~----I~~v~~~D~G 77 (218)
T 1uct_A 6 DFPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYRE--IGRRLKFWNETDPEFV----IDHMDANKAG 77 (218)
T ss_dssp GSCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEE--CSEECC----CCCEEE----ECSCCGGGCE
T ss_pred CCCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccc--ccccCCCCcceeeEEE----EcccccccCE
Confidence 456888988776 57899999999999987 78899999998766432 11111 1123 444 6677999999
Q ss_pred EEEEEEEeCCCce-eEEEEEEEEccCC
Q psy18191 204 VYWCVARNELGFA-RSKNATLDVAGKI 229 (238)
Q Consensus 204 ~Y~C~a~N~~G~~-~s~~~~L~V~~~~ 229 (238)
.|+|.|.|..|.. .+..+.|.|.+.+
T Consensus 78 ~Y~C~a~n~~~~~~~s~~~~l~V~~~~ 104 (218)
T 1uct_A 78 RYQCQYRIGHYRFRYSDTLELVVTGLY 104 (218)
T ss_dssp EEEEEEEETTTEEEECCCEEEEEECSS
T ss_pred EEEEEEEcCCCceeecCCEEEEEcCcc
Confidence 9999999987643 2346788887644
No 280
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.27 E-value=1.6e-11 Score=96.37 Aligned_cols=95 Identities=29% Similarity=0.459 Sum_probs=72.5
Q ss_pred cCCEEEeC----CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCc--cEEEecCCcEEEEEeecCCCCCCCe
Q psy18191 130 RVPRITEH----PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGS--HRILLPAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 130 ~~P~i~~~----~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~--~~~~~~~~~l~~~~vi~~v~~~d~G 203 (238)
.+|.+... +..+.+.+|+++.|.|.+.|.|.|.+.|++++..+...... .......+.|. |..++.+|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G 85 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLV----MESVVPSDRG 85 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEE----ECSCCGGGCE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEE----EEeCCcccCE
Confidence 46766543 34678899999999999999999999999999988754221 12333344554 5666999999
Q ss_pred EEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 204 VYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|+|.|.|..|... ..+.|.|...+
T Consensus 86 ~Y~C~~~~~~~~~~-~~~~l~V~~~~ 110 (241)
T 3grw_A 86 NYTCVVENKFGSIR-QTYTLDVLERS 110 (241)
T ss_dssp EEEEEEEETTEEEE-EEEEEEEECCC
T ss_pred EEEEEEeecCCceE-EEEEEEEeccC
Confidence 99999999999886 58899887643
No 281
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.27 E-value=1.4e-11 Score=92.48 Aligned_cols=60 Identities=12% Similarity=0.155 Sum_probs=45.8
Q ss_pred EEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEE
Q psy18191 150 TLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLD 224 (238)
Q Consensus 150 ~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~ 224 (238)
.|.|.+.|.|.|.++|+++|..+... ....+ ... ...|+|.|+|.|.|.+|...+ .+.|.
T Consensus 109 ~L~C~~~~~p~p~i~W~~~~~~l~~~--------~~~~l--~~~----~~~~~g~Y~C~a~N~~~~~~~-~~~l~ 168 (171)
T 1ccz_A 109 TLTCEVLEGTDVELKLYQGKEHLRSL--------RQKTM--SYQ----WTNLRAPFKCKAVNRVSQESE-MEVVN 168 (171)
T ss_dssp EEEEECSSCSSCEEEEEETTEEEEEE--------SSSEE--EEE----CSCCSSCEEEEEEETTEEEEE-EECCC
T ss_pred EEEEEeCCCCCcEEEEEECCEECcCC--------cceEE--EEe----ccCCCceEEEEEEcccCcccc-eeEEe
Confidence 79999999999999999999887632 11122 222 578899999999999999853 66554
No 282
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.5e-11 Score=84.05 Aligned_cols=81 Identities=25% Similarity=0.418 Sum_probs=59.1
Q ss_pred CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeE
Q psy18191 139 ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARS 218 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s 218 (238)
.++.+.+|+++.|.|.+. .|.|.+.|+|+|..+... .......++.... +.|..+..+|+|.|+|.|.| ..
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~--~~~~~~~~~~~~~-L~I~~~~~~D~G~Y~C~a~~----~~- 89 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSS--SKVRVEAVGCTRR-LVVQQAGQAEAGEYSCEAGG----QQ- 89 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCC--SSEEEEEETTEEE-EEETTCCTTTCSCEEEEETT----EE-
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCC--CCEEEEEcCCEEE-EEECCCCcccCEEEEEEcCC----Cc-
Confidence 346889999999999998 889999999999988753 2222222332221 23788899999999999954 33
Q ss_pred EEEEEEEccC
Q psy18191 219 KNATLDVAGK 228 (238)
Q Consensus 219 ~~~~L~V~~~ 228 (238)
..+.|.|..+
T Consensus 90 ~~~~l~V~~p 99 (102)
T 2eo1_A 90 LSFRLQVAGQ 99 (102)
T ss_dssp CCEEEEEESC
T ss_pred EEEEEEEeCC
Confidence 3778888765
No 283
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.27 E-value=8.3e-12 Score=108.30 Aligned_cols=92 Identities=27% Similarity=0.455 Sum_probs=70.0
Q ss_pred CCEEEe-CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCC-ccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 131 VPRITE-HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIG-SHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 131 ~P~i~~-~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
+|.+.. .+....+.+|+++.|.|.+.|.|.|.++|++++..+..... .+.....++.+. |..++.+|+|.|+|.
T Consensus 384 ~P~i~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~ 459 (477)
T 2id5_A 384 RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLE----VRYAQVQDNGTYLCI 459 (477)
T ss_dssp EEEESCCSCEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTTSCEE----ESSCCSTTCEEEEEE
T ss_pred cccccccccccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCCCEEE----EeeCChHHCEEEEEE
Confidence 444443 35678899999999999999999999999999877653211 222334467765 666799999999999
Q ss_pred EEeCCCceeEEEEEEEEcc
Q psy18191 209 ARNELGFARSKNATLDVAG 227 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~ 227 (238)
|.|..|... ..++|.|.+
T Consensus 460 a~N~~g~~~-~~~~l~V~~ 477 (477)
T 2id5_A 460 AANAGGNDS-MPAHLHVRS 477 (477)
T ss_dssp EEETTEEEE-EEEEEEEEC
T ss_pred EEeCCCcEE-EEEEEEEeC
Confidence 999999996 599998863
No 284
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.26 E-value=2e-11 Score=96.82 Aligned_cols=122 Identities=14% Similarity=0.198 Sum_probs=63.9
Q ss_pred CCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeC-----CCE
Q psy18191 88 ASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYP-----EPR 162 (238)
Q Consensus 88 ~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P-----~p~ 162 (238)
+.+.|+|.|+|.+.+... .. ....+..+|.+...|..+.+.+|+++.|.|.+.|.| .|.
T Consensus 11 v~~~dsg~Y~C~a~g~~~-----~~-----------~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~ 74 (254)
T 2c1o_A 11 VRPGTSVKLSCKASGYSF-----TN-----------YWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTY 74 (254)
T ss_dssp -------------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBC
T ss_pred ecCCccEEEEEcCchhhh-----hh-----------hhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCc
Confidence 567888888876653111 00 001122367777778889999999999999999988 489
Q ss_pred EEEEeC--CEEee----------ccCCccEEEe-cCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 163 IEWYKD--GSLVS----------AEIGSHRILL-PAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 163 i~W~~~--g~~l~----------~~~~~~~~~~-~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
+.|+++ +..+. .....+.... ..+... +.|..++.+|+|.|.|.|.|..+........|.|..
T Consensus 75 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~ 150 (254)
T 2c1o_A 75 LNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFT--LKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR 150 (254)
T ss_dssp EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECC
T ss_pred eEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEE--EEECcCCcccCEEEEEEEEcCcceEecCCEEEEECC
Confidence 999974 32221 0001122111 222222 237888999999999999998765433345677754
No 285
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.25 E-value=1.9e-11 Score=93.70 Aligned_cols=97 Identities=22% Similarity=0.383 Sum_probs=71.4
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeec---------cCCccEEEecCCcEEEEEeecCCCCCC
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSA---------EIGSHRILLPAGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~---------~~~~~~~~~~~~~l~~~~vi~~v~~~d 201 (238)
|+.+...+..+.+.+|+++.|.|.+.|.|.+.+.|++++..+.. .....+....++.|. |..++.+|
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~----i~~v~~~D 76 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGIT----FSSVTRKD 76 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEE----ESCCCGGG
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEE----EcccCccc
Confidence 34566777888999999999999999999999999998755311 001122333345555 56669999
Q ss_pred CeEEEEEEEeCCC--ceeEEEEEEEEccCCCCC
Q psy18191 202 SGVYWCVARNELG--FARSKNATLDVAGKISTA 232 (238)
Q Consensus 202 ~G~Y~C~a~N~~G--~~~s~~~~L~V~~~~~~~ 232 (238)
+|.|+|.|.|..| ... ..+.|.|..++..+
T Consensus 77 ~G~Y~C~~~~~~g~~~~~-~~~~l~V~~~p~~~ 108 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGE-VSIHLTVLVPPSKP 108 (212)
T ss_dssp CEEEEEEEEETTSSSEEE-EEEEEEEEBCCCCC
T ss_pred CeEEEEEEEccCCCcccE-EEEEEEEEcCCCCc
Confidence 9999999999987 343 58888888776554
No 286
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.25 E-value=3.1e-11 Score=103.98 Aligned_cols=149 Identities=15% Similarity=0.093 Sum_probs=84.7
Q ss_pred ccEEEecccccccc---------ce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEE--eCCCC---cceecc-e
Q psy18191 64 PICLRFQDLLPQSK---------QG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKK--YHPPS---LPLFPG-V 124 (238)
Q Consensus 64 ~~~~w~~~~~~~~~---------~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~--~~~~~---~~~~~~-~ 124 (238)
+.+.|++++..+.. .+ ...|.+..+..+| |.|+|.+.+.. |..... +.... .+.... .
T Consensus 164 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~--~~~~~~~~v~~~~~~~~~~~~~~~ 240 (457)
T 1hzh_H 164 VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKP--SNTKVDKKAEPKSCDKTHTCPPCP 240 (457)
T ss_dssp CEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGG--GTEEEEEECCCCCSCSSCSCCSCC
T ss_pred eEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCC--CCcceeEEecccCCCcccccCCCC
Confidence 67999999854321 11 1245666666667 88887665522 111110 00000 000000 0
Q ss_pred ecCCccCCEE-EeCCCceE-EeCCCcEEEEEEEeeeCCC----EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCC
Q psy18191 125 HGDGYRVPRI-TEHPASAV-VPRHEPTTLNCKADGYPEP----RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKK 198 (238)
Q Consensus 125 ~~~v~~~P~i-~~~~~~~~-~~~G~~~~L~C~~~g~P~p----~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~ 198 (238)
...+..+|.+ ...|.... +.+|+++.|.|.+.|.|++ .+.|++++..+............++.+.+...+. +.
T Consensus 241 ~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~-i~ 319 (457)
T 1hzh_H 241 APELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLT-VL 319 (457)
T ss_dssp CCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEEC-CC
T ss_pred CccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEE-EC
Confidence 0012236665 44443332 5789999999999998653 9999999988763211122334567776655432 35
Q ss_pred CCC---CeEEEEEEEeCCCce
Q psy18191 199 DTD---SGVYWCVARNELGFA 216 (238)
Q Consensus 199 ~~d---~G~Y~C~a~N~~G~~ 216 (238)
..| .|.|+|.|.|..+..
T Consensus 320 ~~d~~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 320 HQDWLNGKEYKCKVSNKALPA 340 (457)
T ss_dssp HHHHHHTCCEEEEEECTTSSS
T ss_pred HHHccCCCcEEEEEeCCCCCC
Confidence 566 999999999876654
No 287
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.25 E-value=1.2e-11 Score=106.85 Aligned_cols=98 Identities=22% Similarity=0.384 Sum_probs=71.2
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC-CEEeeccCC-ccEEEecCCcEEEEEeecCCCCCCCeEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD-GSLVSAEIG-SHRILLPAGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~-g~~l~~~~~-~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
..+|.+...+....+.+|+++.|.|.+. |.|.+.|+++ +..+..... .+.....+|+|. |..++.+|+|.|+
T Consensus 350 C~~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~----i~~v~~~D~G~Y~ 423 (452)
T 3zyi_A 350 CSAPFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDGTLN----FSHVLLSDTGVYT 423 (452)
T ss_dssp CCCCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTTSCEE----CSSCCTTCCEEEE
T ss_pred ccCcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCCCeEE----EeecCHHHCEEEE
Confidence 4578887778889999999999999987 9999999995 444432211 223344567776 6677999999999
Q ss_pred EEEEeCCCceeEEEEEEEEccCCCCCC
Q psy18191 207 CVARNELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 207 C~a~N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
|.|.|..|... .++.|.|.+.+.++.
T Consensus 424 C~a~N~~G~~~-~~~~l~v~~~~~~~~ 449 (452)
T 3zyi_A 424 CMVTNVAGNSN-ASAYLNVSTAGTHHH 449 (452)
T ss_dssp EEEECSSCEEE-EEEEEEC--------
T ss_pred EEEEcCCCcEE-EEEEEEEEcccccCC
Confidence 99999999997 599999988776654
No 288
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.25 E-value=5.3e-11 Score=91.65 Aligned_cols=88 Identities=15% Similarity=0.214 Sum_probs=62.6
Q ss_pred eCCCce-EEeCCCcEEEEEEEeeeCCCEEEEEeCC-EEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCC
Q psy18191 136 EHPASA-VVPRHEPTTLNCKADGYPEPRIEWYKDG-SLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 136 ~~~~~~-~~~~G~~~~L~C~~~g~P~p~i~W~~~g-~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~ 213 (238)
..|.+. .+.+|+++.|.|.+.|.|.|.+.|+++. ..+. ........... ..|..++.+|+|.|.|.|.|..
T Consensus 5 i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~-----~~~~~~~~~~~--L~I~~v~~~D~G~Y~C~a~n~~ 77 (202)
T 1vca_A 5 TTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN-----GKVTNEGTTST--LTMNPVSFGNEHSYLCTATCES 77 (202)
T ss_dssp EESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS-----SEEEEETTEEE--EEESSCCGGGCSEEEEEEEETT
T ss_pred ECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc-----ceEEEcCCccE--EEECcCCHHHCEEEEEEEEECC
Confidence 334444 4459999999999999999999999843 2211 11111122111 2377889999999999999999
Q ss_pred CceeEEEEEEEEccCCCC
Q psy18191 214 GFARSKNATLDVAGKIST 231 (238)
Q Consensus 214 G~~~s~~~~L~V~~~~~~ 231 (238)
|... ..+.|.|..++..
T Consensus 78 ~~~~-~~~~l~V~~~p~~ 94 (202)
T 1vca_A 78 RKLE-KGIQVEIYSFPKD 94 (202)
T ss_dssp EEEE-EEEEEEEEBCCSC
T ss_pred ceEe-eEEEEEEEeCCCC
Confidence 8875 6999999876654
No 289
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.24 E-value=4.1e-11 Score=92.73 Aligned_cols=87 Identities=10% Similarity=0.147 Sum_probs=60.9
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEe-eeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKAD-GYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
|.|... .+..+.+|+.+.|.|.+. +.|.|.++|++||..+..+ ...++......-...++|..+..+|+|.|+|.|.
T Consensus 4 p~~~~~-~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~-~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 4 PFTKSE-LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG-PKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp --CCEE-EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSS-SSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CeeecC-CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccC-CCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 455443 367889999999999986 5799999999999999754 3334444331112223478889999999999999
Q ss_pred eCCCceeEEEEEE
Q psy18191 211 NELGFARSKNATL 223 (238)
Q Consensus 211 N~~G~~~s~~~~L 223 (238)
| |.... .+.+
T Consensus 82 N--g~a~~-~~~~ 91 (207)
T 3rbs_A 82 D--GKATN-HSTV 91 (207)
T ss_dssp E--TTEEE-EEEE
T ss_pred C--CCeEE-EEEE
Confidence 9 55532 4444
No 290
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.24 E-value=4.4e-11 Score=95.25 Aligned_cols=136 Identities=12% Similarity=0.128 Sum_probs=75.4
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEee-eCC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADG-YPE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g-~P~ 160 (238)
.|.|.++..+|+|.|.|...+... + +.-.+. ....+. +......+|.+...+....+..|+.+.|.|.+.| .|.
T Consensus 80 sL~I~~v~~~DsG~Y~C~~~~~~~-~-~~~~~~--~~~~l~-V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 154 (253)
T 3liz_H 80 FLQMSSLKSEDTAMYYCTRDPAGR-A-WFAYWG--QGTLVT-VSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPE 154 (253)
T ss_dssp EEEECSCCGGGCEEEEEEECCBTT-T-BCCEEC--CCEEEE-ECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSS
T ss_pred EEEECCCChhhCEEEEEEEecCCc-c-eeeEEC--CCEEEE-EeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCC
Confidence 477777778888888866554210 0 000000 001111 1112346777765444455667999999999988 676
Q ss_pred C-EEEEEeCCEEeeccCCccEEEecCCcEE--EEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 161 P-RIEWYKDGSLVSAEIGSHRILLPAGSLF--FLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~--~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
| .+.|++++..+........ .. .+... ....|..+...| |.|+|.|.|..+... ....|.+.
T Consensus 155 ~~~v~W~~~~~~~~~~~~~~~-~~-~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~-~~~~~~~~ 219 (253)
T 3liz_H 155 PVTVTWNSGSLSSGVHTFPAV-LQ-SDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTK-VDKKIVPR 219 (253)
T ss_dssp CCEEEEGGGTBCTTEEECCCE-EE-TTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEE-EEEECCCC
T ss_pred CeEEEEEeCCeecceEeCCcc-cc-CCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcc-eEEEecCc
Confidence 7 8999999864321101111 11 13222 122356668888 999999999998775 36666654
No 291
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.24 E-value=1.1e-11 Score=102.09 Aligned_cols=85 Identities=14% Similarity=0.172 Sum_probs=54.6
Q ss_pred cCCEE-EeCCCceEEeCCCcEEEEEEEeee-CCC---EEEEEeCC-EEeeccCCccEEE-ecCCcEE--EEEeecCCCCC
Q psy18191 130 RVPRI-TEHPASAVVPRHEPTTLNCKADGY-PEP---RIEWYKDG-SLVSAEIGSHRIL-LPAGSLF--FLSLVHGKKDT 200 (238)
Q Consensus 130 ~~P~i-~~~~~~~~~~~G~~~~L~C~~~g~-P~p---~i~W~~~g-~~l~~~~~~~~~~-~~~~~l~--~~~vi~~v~~~ 200 (238)
.+|.+ ...|....+.+|+++.|.|.+.|. |.| .+.|++++ ..+... ..... ..++... ..+.|..+..+
T Consensus 111 ~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~--~~~~~~~~~g~~~~~~~L~I~~~~~~ 188 (323)
T 2wqr_A 111 RGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHS--TRKEEKQRNGTLTVTSTLPVGTRDWI 188 (323)
T ss_dssp GGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCC--CCEEEECTTSCEEEEEEEECCHHHHH
T ss_pred CCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccc--cCCCccCCCCCEEEEEEEEECHHHcc
Confidence 34544 444555667899999999999886 566 89999975 443321 11111 1223211 12236666899
Q ss_pred CCeEEEEEEEeCCCce
Q psy18191 201 DSGVYWCVARNELGFA 216 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~ 216 (238)
|.|.|+|.|.|..+..
T Consensus 189 D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 189 EGETYQCRVTHPHLPR 204 (323)
T ss_dssp TTCCEEEEEECTTSSS
T ss_pred CCCCEEEEEECCCCCC
Confidence 9999999999987543
No 292
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.24 E-value=2.2e-11 Score=97.53 Aligned_cols=127 Identities=13% Similarity=0.105 Sum_probs=72.5
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce-ecCCccCCEEEe-CCCceEEeCCCcEEEEEEEeee
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV-HGDGYRVPRITE-HPASAVVPRHEPTTLNCKADGY 158 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~-~~~v~~~P~i~~-~~~~~~~~~G~~~~L~C~~~g~ 158 (238)
..|.|.++..+|+|.|.|...+....+ ... ....+... ......+|.+.. .+....+.+|+.+.|.|.+.|.
T Consensus 100 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~----~~~--~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~ 173 (268)
T 3pl6_D 100 STLKIQRTERGDSAVYLCATSALGDTQ----YFG--PGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF 173 (268)
T ss_dssp EEEEECSCCGGGCEEEEEEEESSSSSC----EEC--CCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEEEecCCCce----eeC--CcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcc
Confidence 346677777777777776655321000 000 01111100 001223676544 3555556679999999999987
Q ss_pred CCC--EEEEEeCCEEeeccCCccEEE---------ecCCcEEEEE--eecCCCCCC-CeEEEEEEEeCCCce
Q psy18191 159 PEP--RIEWYKDGSLVSAEIGSHRIL---------LPAGSLFFLS--LVHGKKDTD-SGVYWCVARNELGFA 216 (238)
Q Consensus 159 P~p--~i~W~~~g~~l~~~~~~~~~~---------~~~~~l~~~~--vi~~v~~~d-~G~Y~C~a~N~~G~~ 216 (238)
|++ .++|+++|..+... .... ..++...+.. .|.....+| .|.|+|.|.|.....
T Consensus 174 ~p~~~~v~W~~~g~~l~~~---~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 174 YPDHVELSWWVNGKEVHSG---VCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp BSSCEEEEEEESSSEECTT---EEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred cCCCeEEEEEECCEECCCC---eEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 665 89999999888642 1111 0234443321 233334555 999999999986553
No 293
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.24 E-value=4.6e-11 Score=92.76 Aligned_cols=88 Identities=27% Similarity=0.429 Sum_probs=71.5
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
...+.|...|.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+... ..+.|. |..+..+|+|.|+|.
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~--------~~~~L~----i~~v~~~d~G~Y~C~ 83 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG--------NTSELI----FNAVHVKDAGFYVCR 83 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC--------CSSEEE----ETTCCGGGCEEEEEE
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC--------CCCEEE----EccCChhhCeEeEEE
Confidence 35678888899999999999999999999999999999999887642 123444 667799999999999
Q ss_pred EEeCCCceeEEEEEEEEccC
Q psy18191 209 ARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~ 228 (238)
|.|..|...+..+.|.|...
T Consensus 84 ~~n~~~~~~s~~~~l~V~~~ 103 (218)
T 3k0w_A 84 VNNNFTFEFSQWSQLDVCDI 103 (218)
T ss_dssp EECTTCCEECCCEEEEEECC
T ss_pred EEcCCCCceeeEEEEEEEcc
Confidence 99999876555788888665
No 294
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.23 E-value=1.3e-11 Score=98.61 Aligned_cols=137 Identities=12% Similarity=0.091 Sum_probs=82.0
Q ss_pred cEEEeccccccccc-----eEEEEEc-CCCCCCCCC--ceEEEeCCCcccCCceEEeCCCCcceecceecCCcc--CCEE
Q psy18191 65 ICLRFQDLLPQSKQ-----GLMYLVG-SQASPDYPN--RFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR--VPRI 134 (238)
Q Consensus 65 ~~~w~~~~~~~~~~-----g~~~l~~-~~~~~~~~g--~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~--~P~i 134 (238)
.+.|++++..+... +..++.. ..+...|.| .|+|.+.+... . ......+.+.. +|.+
T Consensus 37 ~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~--~-----------~~~~~~l~V~~~p~p~~ 103 (265)
T 2oz4_A 37 QVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQ--S-----------QETLQTVTIYSFPAPNV 103 (265)
T ss_dssp EEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTE--E-----------EEEEEEEEEECCCCCEE
T ss_pred EEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCC--C-----------cEEEEEEEEeCCCCcee
Confidence 89999998765431 1111111 122455666 47766554321 1 11111111222 4555
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCC-
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNEL- 213 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~- 213 (238)
.. ....+.+|+.+.|.|.+. |.|.+.| +|..+... .. .+.|. |..+...|.|.|+|.|.|..
T Consensus 104 ~~--~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~--~~-----~~~l~----i~~~~~~~~g~Y~C~a~n~~~ 166 (265)
T 2oz4_A 104 IL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL--GP-----RAQLL----LKATPEDNGRSFSCSATLEVA 166 (265)
T ss_dssp EE--SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC--SS-----EECCE----EECCGGGTTEEEEEEEEEECS
T ss_pred ec--CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC--CC-----cEEEE----EccccccCCceEEEEEEcCCC
Confidence 53 456688899999999998 9999999 87776421 11 12233 45558889999999998654
Q ss_pred Ccee--EEEEEEEEccCCCC
Q psy18191 214 GFAR--SKNATLDVAGKIST 231 (238)
Q Consensus 214 G~~~--s~~~~L~V~~~~~~ 231 (238)
|... +..+.|.|..++..
T Consensus 167 g~~~~~s~~~~l~V~~~p~~ 186 (265)
T 2oz4_A 167 GQLIHKNQTRELRVLYGPRL 186 (265)
T ss_dssp SSEEEEEEEEEEEEEEEEEC
T ss_pred CCcccccccEEEEEEeCCcc
Confidence 7653 24677888765543
No 295
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.23 E-value=1.2e-10 Score=94.69 Aligned_cols=145 Identities=13% Similarity=0.169 Sum_probs=81.4
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee-----------cCCccCCEEEeCCCceEEeCCCcE
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH-----------GDGYRVPRITEHPASAVVPRHEPT 149 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~-----------~~v~~~P~i~~~~~~~~~~~G~~~ 149 (238)
..|.|.++.++|+|.|.|...+.. .|.+.-.+... ..+.+.. .....++.+...|..+.+.+|+++
T Consensus 101 ~sL~I~~v~~~DsG~Y~C~~~~~~-~g~~~~~~~~~--~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v 177 (291)
T 2gki_A 101 AYMELSSLTSEDSAVYYCARGAYK-RGYAMDYWGQG--TSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKV 177 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECGG-GTTCEEEECCC--EEEEECC----------------CCCEECSCSEEEEETTSCE
T ss_pred EEEEECcCCHHHCEEEEEEEeccc-cccccceeCCC--cEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcE
Confidence 468888999999999997766532 12111111110 0111000 001124556666777889999999
Q ss_pred EEEEEEeeeCCC------EEEEEeCC--EE---eeccC-------CccEEE-ecCCcEEEEEeecCCCCCCCeEEEEEEE
Q psy18191 150 TLNCKADGYPEP------RIEWYKDG--SL---VSAEI-------GSHRIL-LPAGSLFFLSLVHGKKDTDSGVYWCVAR 210 (238)
Q Consensus 150 ~L~C~~~g~P~p------~i~W~~~g--~~---l~~~~-------~~~~~~-~~~~~l~~~~vi~~v~~~d~G~Y~C~a~ 210 (238)
.|.|.+.+.|.+ .+.|+++. .. +.... ..+... ...... .+.|..++.+|+|.|.|.|.
T Consensus 178 ~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~--~L~I~~v~~~DsG~Y~C~a~ 255 (291)
T 2gki_A 178 TMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDF--TLTISSVQAEDLAVYYCKQS 255 (291)
T ss_dssp EEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEE--EEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEE--EEEECCCCHHHCEEEEEEEc
Confidence 999999988876 89999962 21 11100 111111 112211 22378889999999999999
Q ss_pred eCCCceeEEEEEEEEccCCC
Q psy18191 211 NELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 211 N~~G~~~s~~~~L~V~~~~~ 230 (238)
|.....-..-..|.|.+.+.
T Consensus 256 ~~~~~~fg~gt~l~v~~~~~ 275 (291)
T 2gki_A 256 YYHMYTFGSGTKLEIKHHHH 275 (291)
T ss_dssp ETTEEEECCCEEEEEECC--
T ss_pred cCCceEEcCCEEEEEEeeEc
Confidence 95432222233566655543
No 296
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.23 E-value=1.9e-11 Score=94.49 Aligned_cols=87 Identities=22% Similarity=0.248 Sum_probs=61.9
Q ss_pred ceEEeCCCcEEEEEE---EeeeCCCEEEEEeCCEEeecc----------------CCccEEEecCCcEEEEEeecCCCCC
Q psy18191 140 SAVVPRHEPTTLNCK---ADGYPEPRIEWYKDGSLVSAE----------------IGSHRILLPAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~---~~g~P~p~i~W~~~g~~l~~~----------------~~~~~~~~~~~~l~~~~vi~~v~~~ 200 (238)
++++..|+++.|.|. +.+.|.|.++|+|+|..+... ..........+... +.|..++.+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--L~I~~v~~~ 79 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFF--LVVTAANIS 79 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEE--EEESSCCGG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEE--EEEccCCHH
Confidence 578899999999994 578899999999986432110 00001111222222 247888999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
|+|.|+|.|.|..|... ..+.|.|..++
T Consensus 80 D~G~Y~C~a~n~~g~~~-~~~~l~V~~p~ 107 (203)
T 4fa8_A 80 HDGNYLCRMKLGETEVT-KQEHLSVVKPL 107 (203)
T ss_dssp GCEEEEEEEEETTEEEE-EEEEEEEEEEE
T ss_pred HCeEEEEEEEcCCCcEE-EEEEEEecCCc
Confidence 99999999999999996 48899987654
No 297
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.23 E-value=9.4e-12 Score=95.20 Aligned_cols=95 Identities=19% Similarity=0.306 Sum_probs=68.5
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..+|.|...|. ..+.+|+++.|.|.+.+.|. .+.|+|+|..+.............+.|. |..++.+|+|.|+|.
T Consensus 3 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~----i~~v~~~D~G~Y~C~ 76 (198)
T 1ugn_A 3 LPKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFP----IPSITWEHTGRYRCY 76 (198)
T ss_dssp CCCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEE----ESSCCGGGCEEEEEE
T ss_pred CCCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEE----ECCCCHHHCeEEEEE
Confidence 35788887776 47899999999999998875 6999999987642111111112345555 566799999999999
Q ss_pred EEeCC-Cc-eeEEEEEEEEccCC
Q psy18191 209 ARNEL-GF-ARSKNATLDVAGKI 229 (238)
Q Consensus 209 a~N~~-G~-~~s~~~~L~V~~~~ 229 (238)
|.|.. |. ..+..+.|.|...+
T Consensus 77 a~n~~~g~~~~s~~~~l~V~~~~ 99 (198)
T 1ugn_A 77 YGSDTAGRSESSDPLELVVTGAY 99 (198)
T ss_dssp EEETTTEECCCCCCEEEEEECSS
T ss_pred EECCCCCcccCCccEEEEEcccc
Confidence 99988 62 22357888887744
No 298
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.22 E-value=9.6e-11 Score=89.57 Aligned_cols=95 Identities=21% Similarity=0.233 Sum_probs=65.9
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCC-----CEEEEEeCCEEeeccCCccEEEecC----CcEEEEEeecCCCCCCCeE
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPE-----PRIEWYKDGSLVSAEIGSHRILLPA----GSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~-----p~i~W~~~g~~l~~~~~~~~~~~~~----~~l~~~~vi~~v~~~d~G~ 204 (238)
+...+..+.+.+|+++.|.|.+.+.|. +.+.|++++..+... ..+.....+ +...+ .|..++.+|+|.
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~-~~r~~~~~~~~~~~~~~L--~I~~v~~~D~G~ 81 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQ-SERATLLEEQLPLGKALF--HIPSVQVRDSGQ 81 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCB-CSSCEECGGGGGGTEEEE--EECSCCGGGCEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCccccc-CCceEEeeccccCCeeEE--EECCCCHHHCcE
Confidence 334445678899999999999999886 899999944333322 122222221 22222 277889999999
Q ss_pred EEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 205 YWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 205 Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
|+|.|.|..|... ..+.|.|..++..+
T Consensus 82 Y~C~~~~~~~~~~-~~~~l~V~~~~~~p 108 (202)
T 3bp6_B 82 YRCLVICGAAWDY-KYLTVKVKASYMRI 108 (202)
T ss_dssp EEEEEEETTEEEE-EEEEEEEEBCCCCE
T ss_pred EEEEEEeCCCcce-EEEEEEecCCCCcc
Confidence 9999999999875 59999998765443
No 299
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.22 E-value=3.1e-11 Score=91.66 Aligned_cols=94 Identities=18% Similarity=0.235 Sum_probs=65.8
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.|...|.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+............++.|. |..++.+|+|.|+|.|
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~----I~~v~~~D~G~Y~C~~ 76 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFY----IPDMNSRMAGQYSCIY 76 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEE----ESSCCGGGCEEEEEEE
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEE----eCcCCcccCeEEEEEe
Confidence 47888887776 7899999999999876 4578999999987753101100001122232 6778999999999999
Q ss_pred EeCCCce-eEEEEEEEEccCC
Q psy18191 210 RNELGFA-RSKNATLDVAGKI 229 (238)
Q Consensus 210 ~N~~G~~-~s~~~~L~V~~~~ 229 (238)
.|..|.. .+..+.|.|.+..
T Consensus 77 ~~~~~~~~~s~~~~l~V~~~~ 97 (188)
T 1oll_A 77 RVGELWSEPSNLLDLVVTEMY 97 (188)
T ss_dssp EETTEECCCCCCEEEEEESCS
T ss_pred cCCCCCCCCCCceEEEecccC
Confidence 9976532 2357788887543
No 300
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.22 E-value=1.2e-11 Score=102.86 Aligned_cols=89 Identities=21% Similarity=0.326 Sum_probs=55.0
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCC--CEEEEEeCCEEeeccCCccEEEecCCcEEEEEe--ecCCCCCCCe
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPE--PRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSL--VHGKKDTDSG 203 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~--p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~v--i~~v~~~d~G 203 (238)
...+|.+...+.......|+.+.|.|.+.|.++ +.+.|+++|..+............+|++.+... |.....+|.|
T Consensus 239 ~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g 318 (344)
T 1za6_B 239 QPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGN 318 (344)
T ss_dssp CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTC
T ss_pred CCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCC
Confidence 346777765433222235777999999999633 689999999877532111112234555544332 2222345699
Q ss_pred EEEEEEEeCCCce
Q psy18191 204 VYWCVARNELGFA 216 (238)
Q Consensus 204 ~Y~C~a~N~~G~~ 216 (238)
.|+|.|.|.....
T Consensus 319 ~YtC~a~~~~l~~ 331 (344)
T 1za6_B 319 VFSCSVMHEALHN 331 (344)
T ss_dssp EEEEEEECTTSTT
T ss_pred eEEEEEEcCCCCC
Confidence 9999999977554
No 301
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.22 E-value=9.7e-11 Score=92.53 Aligned_cols=124 Identities=14% Similarity=0.205 Sum_probs=68.8
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCC--------ccCCEEEeCCCceEEeCCCcEEEE
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDG--------YRVPRITEHPASAVVPRHEPTTLN 152 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v--------~~~P~i~~~~~~~~~~~G~~~~L~ 152 (238)
..|.|.++.++|+|.|.|.+.+... . .+.. ...+.+..... ..++.....+....+.+|+++.|.
T Consensus 76 ~~L~I~~v~~~D~G~Y~C~~~n~~~--~---~~~~--~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~ 148 (247)
T 1svz_A 76 FTLKISRVEAEDLGIYYCFQGSHFP--P---TFGG--GTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKIS 148 (247)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSS--C---EECC--CEEEEEC---------------CCEEEECCCEEECTTCCEEEE
T ss_pred EEEEECCCCHHHCEEEEEEEccCCc--c---EECC--CEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEE
Confidence 3678888889999999977665311 0 0000 01111000000 002222333344568999999999
Q ss_pred EEEeeeC--CCEEEEEeCC--EEee----cc-----------CCccEEEec--CCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 153 CKADGYP--EPRIEWYKDG--SLVS----AE-----------IGSHRILLP--AGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 153 C~~~g~P--~p~i~W~~~g--~~l~----~~-----------~~~~~~~~~--~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
|.+.+.| .+.+.|++++ ..+. .. ...+..... .+. ...+.|..++.+|+|.|.|.|.|
T Consensus 149 C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~L~I~~v~~~DsG~Y~C~a~n 227 (247)
T 1svz_A 149 CKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTS-TAFLQINNLKNEDTATYFCVRDR 227 (247)
T ss_dssp EEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGT-EEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCC-EEEEEECCCChhHCEEEEEEEec
Confidence 9999875 5789999963 2110 00 011111111 111 11223788899999999999999
Q ss_pred C
Q psy18191 212 E 212 (238)
Q Consensus 212 ~ 212 (238)
.
T Consensus 228 ~ 228 (247)
T 1svz_A 228 H 228 (247)
T ss_dssp G
T ss_pred c
Confidence 5
No 302
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.21 E-value=4.9e-11 Score=100.05 Aligned_cols=86 Identities=17% Similarity=0.197 Sum_probs=67.5
Q ss_pred CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccC-CccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEI-GSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~-~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
+..+.+.+|+++.|.|.+.| |.|.+.|++++..+.... ...++...++.|. |..++.+|+|.|+|.|.|..|..
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~~~~~L~----I~~v~~~D~G~Y~C~a~N~~g~~ 327 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSVRNGDLF----FKKVQVEDGGVYTCYAMGETFNE 327 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEEETTEEE----ESSCCTTSCEEEEEEEECSSCEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEeecCeEE----EeecCcccCEEEEEEEecCCCcc
Confidence 45678999999999999999 999999999776544321 1112223667765 66779999999999999999999
Q ss_pred eEEEEEEEEccCC
Q psy18191 217 RSKNATLDVAGKI 229 (238)
Q Consensus 217 ~s~~~~L~V~~~~ 229 (238)
. ..+.|.|...+
T Consensus 328 ~-~~~~l~V~~~~ 339 (361)
T 2xot_A 328 T-LSVELKVYNFT 339 (361)
T ss_dssp E-EEEEEEEESSC
T ss_pred E-EEEEEEEEeee
Confidence 6 59999997654
No 303
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.21 E-value=2.3e-11 Score=83.93 Aligned_cols=91 Identities=16% Similarity=0.179 Sum_probs=62.9
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+|.|...|.. .+.+|++++|.|.+.+. .+.+.|+|+|..+... +......... ..|..++.+|+|.|.|.+
T Consensus 4 ~kP~i~~~p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~----~~~~~~~~~~--l~I~~v~~~dsG~Y~C~~ 75 (105)
T 2vsd_A 4 PQPSLSLHPSQ-GVSLGDTVTLRCHLPRM-AAWVQLWLNGTLRFDK----EKDKEQDAAE--FSFAVTNLEDAGTYQCRY 75 (105)
T ss_dssp CCCEEEEESCS-SCCTTCEEEEEEECCSS-CEEEEEEETTEEEEEE----EECTTCSEEE--EEEECCSGGGCEEEEEEE
T ss_pred CCCEEEeCCCC-CcCcCCCEEEEEEcCCC-CcEEEEEECCccceee----eccCCCCEEE--EEECCCCHHHCeEEEEEE
Confidence 57888877765 68899999999998765 4678999999766421 1111111111 126677999999999999
Q ss_pred EeCC---CceeEEEEEEEEccC
Q psy18191 210 RNEL---GFARSKNATLDVAGK 228 (238)
Q Consensus 210 ~N~~---G~~~s~~~~L~V~~~ 228 (238)
.|.. .+..|..+.|.|.+.
T Consensus 76 ~n~~~~~~s~~Sdpl~L~V~~~ 97 (105)
T 2vsd_A 76 QVSEPLWTSNQSDPVELVLTIE 97 (105)
T ss_dssp EEETTEEECCCCCCEEECCC--
T ss_pred EcCCCCcccCCCCCEEEEEEEe
Confidence 9964 334456788887654
No 304
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.21 E-value=4.1e-11 Score=94.20 Aligned_cols=140 Identities=19% Similarity=0.120 Sum_probs=78.0
Q ss_pred cEEEecccccc-cc---------ce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecC--C
Q psy18191 65 ICLRFQDLLPQ-SK---------QG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGD--G 128 (238)
Q Consensus 65 ~~~w~~~~~~~-~~---------~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~--v 128 (238)
.+.|++++..+ .. .| ...|.+..+..+|+|.|+|.+.+... . ...... +... .
T Consensus 47 ~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~--~--------~~~~~~-v~~~~~~ 115 (231)
T 2w59_A 47 SVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEEL--P--------LPLSKS-VYRNTGP 115 (231)
T ss_dssp EEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTC--S--------SCEEEE-ECCCCSC
T ss_pred EEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCC--C--------CceEEE-EecCCCC
Confidence 89999988755 21 11 12355555556667777765554211 0 001111 1110 2
Q ss_pred ccCCEEEeC-CCceEEeCCCcEEEEEEEeee-C-CCEEEEEeCCEEeeccCCcc--EEEe--------cC-CcEEEEE--
Q psy18191 129 YRVPRITEH-PASAVVPRHEPTTLNCKADGY-P-EPRIEWYKDGSLVSAEIGSH--RILL--------PA-GSLFFLS-- 192 (238)
Q Consensus 129 ~~~P~i~~~-~~~~~~~~G~~~~L~C~~~g~-P-~p~i~W~~~g~~l~~~~~~~--~~~~--------~~-~~l~~~~-- 192 (238)
..+|.+... +.... ..|+.+.|.|.+.|. | .+.|.|+++|..+....... .... .+ +++.+..
T Consensus 116 ~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L 194 (231)
T 2w59_A 116 TTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKM 194 (231)
T ss_dssp CBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEE
T ss_pred CcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEE
Confidence 256766543 33222 235679999999986 4 37899999999986531000 0111 23 5543322
Q ss_pred eecCCCCCCCeEEEEEEEeCCCce
Q psy18191 193 LVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 193 vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
.|......|.|.|+|.|.|.....
T Consensus 195 ~i~~~~~~~~g~YtC~v~n~~l~~ 218 (231)
T 2w59_A 195 SVETAKWNGGTVFACMAVHEALPM 218 (231)
T ss_dssp EEEHHHHHTTCCEEEEEECTTSTT
T ss_pred EEeHHHcCCCCcEEEEEEcCCCCC
Confidence 233345567999999999988654
No 305
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.21 E-value=1.5e-10 Score=78.52 Aligned_cols=89 Identities=15% Similarity=0.162 Sum_probs=63.2
Q ss_pred ceEEeCCCcEEEEEEEee-eCCCEEEEEeCC----EEeeccCCcc-EEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCC
Q psy18191 140 SAVVPRHEPTTLNCKADG-YPEPRIEWYKDG----SLVSAEIGSH-RILLPAGSLFFLSLVHGKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g-~P~p~i~W~~~g----~~l~~~~~~~-~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~ 213 (238)
..++..|+.+.|.|.+.+ .|.|+|+|.|.+ .++......+ .+...+....+...|..+...|+|.|.|.|.|..
T Consensus 23 ~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~ 102 (122)
T 1xau_A 23 KHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNS 102 (122)
T ss_dssp EEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred cEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCC
Confidence 467899999999999955 689999999865 3332210101 1222233233333478889999999999999999
Q ss_pred CceeEEEEEEEEccC
Q psy18191 214 GFARSKNATLDVAGK 228 (238)
Q Consensus 214 G~~~s~~~~L~V~~~ 228 (238)
|..+++..+|.|.+.
T Consensus 103 g~ieSHs~ti~V~~~ 117 (122)
T 1xau_A 103 QVINSHSVTIHVRER 117 (122)
T ss_dssp EEEECCCEEEEEC--
T ss_pred CceeeeEEEEEEEee
Confidence 999888889998763
No 306
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.21 E-value=2.1e-10 Score=89.53 Aligned_cols=133 Identities=14% Similarity=0.207 Sum_probs=74.2
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-C
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-P 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P 159 (238)
..|.|.++..+|+|.|.|...+....+.+.-.+. ....+. +......+|.+...+....+.+|+.+.|.|.+.|. |
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~--~~~~L~-V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 155 (223)
T 1dee_B 79 LYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWG--QGTLVT-VSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLP 155 (223)
T ss_dssp EEEEECSCCGGGCEEEEEEEESSSSTTCCEEEEC--CCEEEE-ECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBS
T ss_pred EEEEECCCCHHHCEEEEEEEeccccCcccceeec--CcEEEE-EccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeC
Confidence 3577778888888888876554210000000110 011111 11112246666542222235789999999999887 7
Q ss_pred CC-EEEEEe-CCEEeeccCCccEEEecCCcEEE--EEeecCCCC--CCCeEEEEEEEeCCCcee
Q psy18191 160 EP-RIEWYK-DGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKD--TDSGVYWCVARNELGFAR 217 (238)
Q Consensus 160 ~p-~i~W~~-~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~--~d~G~Y~C~a~N~~G~~~ 217 (238)
.| .+.|++ +|..+... ........++.... ...|..... .|.|.|+|.|.|..|...
T Consensus 156 ~p~~v~W~~~~g~~l~~~-~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~ 218 (223)
T 1dee_B 156 DSITFSWKYKNNSDISST-RGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKE 218 (223)
T ss_dssp SCCEEEEEETTSCBCSCE-EECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEE
T ss_pred CCeEEEeEccCCCcccee-EECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCc
Confidence 77 999999 88776420 00000011233222 122444454 678999999999998874
No 307
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.21 E-value=6.4e-11 Score=93.41 Aligned_cols=129 Identities=12% Similarity=0.121 Sum_probs=72.9
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce-ecCCccCCEEEe-CCCceEEeCCCcEEEEEEEeee
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV-HGDGYRVPRITE-HPASAVVPRHEPTTLNCKADGY 158 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~-~~~v~~~P~i~~-~~~~~~~~~G~~~~L~C~~~g~ 158 (238)
..|.|.++..+|+|.|.|...+...... -..... ..+... ......+|.+.. .+....+.+|+.+.|.|.+.|.
T Consensus 76 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~--~~~~~~--~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~ 151 (245)
T 4ei6_B 76 FTLKIQPTALEDSAVYFCASSFWGAYAE--QFFGPG--TRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF 151 (245)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSTTCC--CEECCC--EEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE
T ss_pred EEEEECCCCHhHCEEEEEEEccCCCcce--EEEcCC--cEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeE
Confidence 3677778888888888876553110000 000000 111100 000124666543 4555556679999999999885
Q ss_pred -CCC-EEEEEeCCEEeeccCCccEEEe---------cCCcEEEE--EeecCCCCCC-CeEEEEEEEeCCCce
Q psy18191 159 -PEP-RIEWYKDGSLVSAEIGSHRILL---------PAGSLFFL--SLVHGKKDTD-SGVYWCVARNELGFA 216 (238)
Q Consensus 159 -P~p-~i~W~~~g~~l~~~~~~~~~~~---------~~~~l~~~--~vi~~v~~~d-~G~Y~C~a~N~~G~~ 216 (238)
|.| .+.|+++|..+... ..... .++...+. ..|.....+| .|.|+|.|.|.....
T Consensus 152 ~p~~~~v~W~~~g~~l~~~---~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~ 220 (245)
T 4ei6_B 152 YPDHVELSWWVNGKEVHSG---VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp BSSCEEEEEEETTEEECTT---EEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred eCCCeEEEEEECCEECCCC---cccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCCC
Confidence 445 89999999988642 11110 24443321 1233445667 899999999976443
No 308
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.20 E-value=9e-11 Score=88.37 Aligned_cols=89 Identities=18% Similarity=0.174 Sum_probs=65.0
Q ss_pred ceEEeCCCcEEEEEEEee--eCCCEEEEEeCCEEeec--------cCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEE
Q psy18191 140 SAVVPRHEPTTLNCKADG--YPEPRIEWYKDGSLVSA--------EIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVA 209 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g--~P~p~i~W~~~g~~l~~--------~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a 209 (238)
.+.+.+|+++.|.|...+ .|.|.|.|+|++..+.. ....+.....++.|. |..++.+|+|.|+|.|
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~----I~~v~~~D~G~Y~C~~ 80 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLK----IKNLTRDDSGTYNVTV 80 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEE----ESSCCGGGCEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEE----EcccccccCEEEEEEE
Confidence 356789999999996433 56789999999976531 012233334566665 6677999999999999
Q ss_pred EeCCCce-eEEEEEEEEccCCCCC
Q psy18191 210 RNELGFA-RSKNATLDVAGKISTA 232 (238)
Q Consensus 210 ~N~~G~~-~s~~~~L~V~~~~~~~ 232 (238)
.|..|.. .+..+.|.|..++..|
T Consensus 81 ~n~~g~~~~~~~~~l~V~~~~~~p 104 (176)
T 1hng_A 81 YSTNGTRILNKALDLRILEMVSKP 104 (176)
T ss_dssp EETTCCEEEEEEEEEEEECCCCCC
T ss_pred EeCCCCEEEEEEEEEEEeCCCCCC
Confidence 9999986 3357889998765543
No 309
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.20 E-value=1.8e-10 Score=91.81 Aligned_cols=141 Identities=14% Similarity=0.109 Sum_probs=77.2
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceec------------CCccCCEEEeCCCceEEeCCCcE
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHG------------DGYRVPRITEHPASAVVPRHEPT 149 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~------------~v~~~P~i~~~~~~~~~~~G~~~ 149 (238)
.|.|.++.++|+|.|.|...+.. |... ... ....+.+... .....|.+...+..+.+.+|+++
T Consensus 80 ~L~I~~v~~~DsG~Y~C~~~~~~--~~~~-~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v 154 (259)
T 3omz_A 80 RMILRNLIENDSGVYYCATWDQN--YYKK-LFG--SGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAV 154 (259)
T ss_dssp EEEESSCCGGGCEEEEEEEECTT--SSCE-EEC--CCEEEEEEC------------------CEEECCCCCEEEETTCCE
T ss_pred EEEECCCCcccCEEEEEEEeeCC--cccc-EEC--CCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCE
Confidence 47788888889999987765531 1000 000 0011110000 00114677777888999999999
Q ss_pred EEEEEEeee-CCCEEEEEeCC--EEee---cc-------CCccEEEe--c---CCcEEEEEeecCCCCCCCeEEEEEEEe
Q psy18191 150 TLNCKADGY-PEPRIEWYKDG--SLVS---AE-------IGSHRILL--P---AGSLFFLSLVHGKKDTDSGVYWCVARN 211 (238)
Q Consensus 150 ~L~C~~~g~-P~p~i~W~~~g--~~l~---~~-------~~~~~~~~--~---~~~l~~~~vi~~v~~~d~G~Y~C~a~N 211 (238)
.|.|.+.+. |.+.+.|++++ ..+. .. ...+.... . ...|. |..++.+|+|.|.|.+.+
T Consensus 155 ~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~----I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 155 TLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALT----ISALQLEDSAKYFCALGE 230 (259)
T ss_dssp EECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEE----ESSCCGGGCSEEEEEEES
T ss_pred EEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEE----ECCCChhHCEEEEEEEeC
Confidence 999998875 88999999843 1111 00 00111111 0 12243 677799999999999985
Q ss_pred CCCc---e-eEEEEEEEEccCCCC
Q psy18191 212 ELGF---A-RSKNATLDVAGKIST 231 (238)
Q Consensus 212 ~~G~---~-~s~~~~L~V~~~~~~ 231 (238)
..+. . ...-..|.|.+....
T Consensus 231 ~~~~~~~~~fg~GT~l~v~~~~~~ 254 (259)
T 3omz_A 231 SLTRADKLIFGKGTRVTVEPRSQH 254 (259)
T ss_dssp CSSTTCCCEECCCEEEEEEC----
T ss_pred ccCCCCceEECCCCEEEEeeCccc
Confidence 3211 0 111336777665543
No 310
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.19 E-value=5.7e-11 Score=93.47 Aligned_cols=130 Identities=13% Similarity=0.188 Sum_probs=73.6
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce-ecCCccCCEEEe-CCCceEEeCCCcEEEEEEEee-
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV-HGDGYRVPRITE-HPASAVVPRHEPTTLNCKADG- 157 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~-~~~v~~~P~i~~-~~~~~~~~~G~~~~L~C~~~g- 157 (238)
..|.|.++..+|+|.|.|.......... ... ....+... ......+|.+.. .+....+.+|+.+.|.|.+.|
T Consensus 75 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~---~~~--~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~ 149 (240)
T 3q5y_A 75 SEMNMSALELEDSAMYFCASSLRWGDEQ---YFG--PGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGF 149 (240)
T ss_dssp EEEEECSCCGGGCEEEEEEEESSTTBCC---EEC--CCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE
T ss_pred EEEEECcCChhHCEEEEEEEccCCCcce---EEc--CCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeE
Confidence 3577778888888888876641100000 000 01111100 001225666654 345555667999999999988
Q ss_pred eCCC-EEEEEeCCEEeeccCCc--cEEEecCCcEEEE--EeecCCCCCC-CeEEEEEEEeCCCc
Q psy18191 158 YPEP-RIEWYKDGSLVSAEIGS--HRILLPAGSLFFL--SLVHGKKDTD-SGVYWCVARNELGF 215 (238)
Q Consensus 158 ~P~p-~i~W~~~g~~l~~~~~~--~~~~~~~~~l~~~--~vi~~v~~~d-~G~Y~C~a~N~~G~ 215 (238)
.|.| .+.|+++|..+...... ......++...+. +.|..+...| .|.|+|.|.|....
T Consensus 150 ~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 150 FPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp BSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 5656 79999999988642100 0112234443321 2244446677 67999999997654
No 311
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.17 E-value=4.5e-10 Score=97.30 Aligned_cols=92 Identities=16% Similarity=0.146 Sum_probs=56.2
Q ss_pred cCCEE-EeCCCceEEeCCCcEEEEEEEeeeCC---CEEEEEeCCEEeeccCCccEEEecCCcE--EEEEeecCCCCCCCe
Q psy18191 130 RVPRI-TEHPASAVVPRHEPTTLNCKADGYPE---PRIEWYKDGSLVSAEIGSHRILLPAGSL--FFLSLVHGKKDTDSG 203 (238)
Q Consensus 130 ~~P~i-~~~~~~~~~~~G~~~~L~C~~~g~P~---p~i~W~~~g~~l~~~~~~~~~~~~~~~l--~~~~vi~~v~~~d~G 203 (238)
.+|.+ ...|....+.+|+++.|.|.+.|.++ +.+.| ++..+............+|.. ...+.|..+..+|.|
T Consensus 245 ~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G 322 (475)
T 1iga_A 245 CHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGK 322 (475)
T ss_pred CCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCC
Confidence 35655 33344444689999999999998754 68999 444333210111111112221 112236667999999
Q ss_pred EEEEEEEeCCCceeEEEEEEE
Q psy18191 204 VYWCVARNELGFARSKNATLD 224 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~ 224 (238)
.|+|.|.|..|... ....|.
T Consensus 323 ~Y~C~a~n~~~~~~-~~~~v~ 342 (475)
T 1iga_A 323 TFTCTAAYPESKTP-LTATLS 342 (475)
T ss_pred cEEEEEEcCCCCCc-eEEEee
Confidence 99999999999864 244553
No 312
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.17 E-value=2.5e-10 Score=96.30 Aligned_cols=142 Identities=13% Similarity=0.094 Sum_probs=84.1
Q ss_pred cEEEecccccccc----------ce----EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCcc
Q psy18191 65 ICLRFQDLLPQSK----------QG----LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYR 130 (238)
Q Consensus 65 ~~~w~~~~~~~~~----------~g----~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~ 130 (238)
.+.||+++..+.. .+ ...|.+..+..+|+|.|+|.+.+...... ....+. ....+..
T Consensus 203 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~--------~~~~v~-~~~~~~~ 273 (376)
T 2aty_A 203 QFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAP--------IEKTIS-KTKGRPK 273 (376)
T ss_pred EEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCCc--------eEEEEc-CCCCCCc
Confidence 5899998753211 01 12456666667777788766655321000 000111 1113557
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCCEEeeccCCccEEEecCCcEEEEEe--ecCCCCCCCeEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYP--EPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSL--VHGKKDTDSGVYW 206 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~v--i~~v~~~d~G~Y~ 206 (238)
+|.+...+.......|+.+.|.|.+.|.+ .+.|+|+++|..+............+++..+... |......|.|.|+
T Consensus 274 ~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~Yt 353 (376)
T 2aty_A 274 APQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFT 353 (376)
T ss_pred CCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEE
Confidence 88888776655555689999999999863 4589999999887532111112234555443322 3333455789999
Q ss_pred EEEEeCCCc
Q psy18191 207 CVARNELGF 215 (238)
Q Consensus 207 C~a~N~~G~ 215 (238)
|.|.|..-.
T Consensus 354 C~v~h~~l~ 362 (376)
T 2aty_A 354 CSVLHEGLH 362 (376)
T ss_pred EEEEeCCCC
Confidence 999997643
No 313
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.17 E-value=8.9e-11 Score=90.03 Aligned_cols=99 Identities=17% Similarity=0.129 Sum_probs=64.8
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
...+|.|...|. ..+.+|++++|.|.+.+ |.+.+.|+|+|..+.......... .........|..++.+|+|.|+|
T Consensus 5 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~--~~~~~~~l~I~~v~~~D~G~Y~C 80 (201)
T 1nkr_A 5 VHRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHH--DGVSKANFSISRMTQDLAGTYRC 80 (201)
T ss_dssp --CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEE--TTEEEEEEEESSCCGGGCEEEEE
T ss_pred cCCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecC--CCCceEEEEeccCCcccCeEEEE
Confidence 346788887775 77899999999999974 788999999987654210000011 11111112377889999999999
Q ss_pred EEEeCC----CceeEEEEEEEEccCCC
Q psy18191 208 VARNEL----GFARSKNATLDVAGKIS 230 (238)
Q Consensus 208 ~a~N~~----G~~~s~~~~L~V~~~~~ 230 (238)
.|.|.. +...+..+.|.|.+.+.
T Consensus 81 ~a~~~~~~~~~~~~s~~~~l~V~~~~~ 107 (201)
T 1nkr_A 81 YGSVTHSPYQVSAPSDPLDIVIIGLYE 107 (201)
T ss_dssp EEEBTTBTTCCCCCCCCEEEEEECSSC
T ss_pred eEecCCCCccccCCCCCEEEEeeccCC
Confidence 998753 12223467888876543
No 314
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.17 E-value=1.4e-10 Score=89.86 Aligned_cols=127 Identities=15% Similarity=0.226 Sum_probs=72.8
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~ 160 (238)
.|.|.++..+|+|.|.|...+.. |.. .. ......+. +......+|.+...+....+..|+.+.|.|.+.|. |.
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~--~~~--~~-~~~~~~L~-V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 152 (215)
T 1c5d_H 79 FLKMNSLQTEDTAIYFCTREDGW--NYF--DY-WGPGTMVT-VSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPE 152 (215)
T ss_dssp EEEESSCCGGGCEEEEEEECCSS--SCS--CC-BCCCEEEE-ECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSS
T ss_pred EEEECCCCcccCEEEEEEEecCC--ccc--ce-EcCCEEEE-ecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcC
Confidence 67777888888888887665531 100 00 00011111 11112245666543322335789999999999987 88
Q ss_pred C-EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 161 P-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
| .+.|++++..+....... .. .++...+...+......| |.|+|.|.|..|...
T Consensus 153 p~~v~W~~~g~~~~~~~~~~-~~-~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~ 207 (215)
T 1c5d_H 153 PVTVTWNSGALSSDVHTFPA-VL-QSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTK 207 (215)
T ss_dssp CCEEEEGGGTTCCSCCBCCC-EE-ETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEE
T ss_pred CcEEEEccCCccCceEecCc-cc-CCCCEEEEEEEecccCCC-CeEEEEEEeCCCCcc
Confidence 8 999999986543211111 11 235444433333223356 999999999998763
No 315
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.16 E-value=7e-11 Score=81.89 Aligned_cols=90 Identities=23% Similarity=0.424 Sum_probs=61.5
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC-----EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCe
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEP-----RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p-----~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G 203 (238)
..+|.+...|.. .+.+|+.++|.|.+.+.|.+ .+.|+|+|..+.. ......+. |..++.+|+|
T Consensus 6 ~~kP~l~~~p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~-------~~~~~~l~----i~~v~~~dsG 73 (108)
T 4hwn_A 6 FPAPILRAVPSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS-------RGLSSEFQ----IPTASEDHSG 73 (108)
T ss_dssp CCCCEEEEESCS-SCBTTCCEEEEEEC---------CCEEEEEETTEEEEE-------EESCCEEE----ESSCCGGGCE
T ss_pred CCCCEEEecCCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC-------CCcccEEE----eCccCcccCe
Confidence 357888776653 47889999999999776654 4999999987752 12234454 5667999999
Q ss_pred EEEEEEEeCCCc--eeEEEEEEEEccCCC
Q psy18191 204 VYWCVARNELGF--ARSKNATLDVAGKIS 230 (238)
Q Consensus 204 ~Y~C~a~N~~G~--~~s~~~~L~V~~~~~ 230 (238)
.|.|.|.|..|. ..|..+.|.|.+...
T Consensus 74 ~Y~C~~~~~~~~~~~~S~~l~L~V~g~~~ 102 (108)
T 4hwn_A 74 SYWCEAATEDNQVWKQSPQLEIRVQGASA 102 (108)
T ss_dssp EEEEEEECTTSSSEEECCCEEECCBC---
T ss_pred EEEEEEEeCCCceeccCCCEEEEEEecch
Confidence 999999998752 345678888877543
No 316
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.16 E-value=5.7e-11 Score=89.05 Aligned_cols=83 Identities=25% Similarity=0.382 Sum_probs=66.4
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCE-EEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPEPR-IEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
..+|.+...|....+.+|+++.|.|.+.+.|.|. +.|++++..+.. ..+.|. |..++.+|+|.|+|
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~---------~~~~L~----i~~~~~~d~G~Y~C 71 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS---------QASSYF----IDAATVNDSGEYRC 71 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES---------SCSEEE----ESSCCGGGCEEEEE
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC---------CceEEE----EeCCCcccCEEEEE
Confidence 4678888888888999999999999999998877 889999988763 234444 56679999999999
Q ss_pred EEEeCCCceeEEEEEEEEcc
Q psy18191 208 VARNELGFARSKNATLDVAG 227 (238)
Q Consensus 208 ~a~N~~G~~~s~~~~L~V~~ 227 (238)
.|.|..++. .+.|.|..
T Consensus 72 ~~~n~~~s~---~~~l~V~~ 88 (175)
T 1fnl_A 72 QTNLSTLSD---PVQLEVHI 88 (175)
T ss_dssp ECSSSCCCC---CEEEEEEC
T ss_pred EeeCCcccc---cEEEEEeC
Confidence 999966643 56666653
No 317
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.16 E-value=2.8e-10 Score=79.19 Aligned_cols=85 Identities=15% Similarity=0.149 Sum_probs=60.3
Q ss_pred ceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEe-----e------------ccCCccEEEecCCcEEEEEeecCCCCCCC
Q psy18191 140 SAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLV-----S------------AEIGSHRILLPAGSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l-----~------------~~~~~~~~~~~~~~l~~~~vi~~v~~~d~ 202 (238)
+..+.+|+++.|.|.....+.+.+.|+|+.... . ..-.++.....+|+|. |++++.+|+
T Consensus 9 p~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~----I~nvt~~D~ 84 (111)
T 2qsq_A 9 PFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLL----IQNIIQNDA 84 (111)
T ss_dssp SSEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEE----ECSCCGGGC
T ss_pred cceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEE----EccCcccCC
Confidence 357889999999998544445579999975321 1 0012344456788887 556699999
Q ss_pred eEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 203 GVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 203 G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|.|+|.+.|..+......+.|.|..+
T Consensus 85 G~Ytc~v~~~~~~~~~~~~~L~V~~~ 110 (111)
T 2qsq_A 85 GFYTLHVIKSDLVNEEATGQFRVYPE 110 (111)
T ss_dssp EEEEEEEEETTSCCEEEEEEEEEECC
T ss_pred eEEEEEEEeCCCcEEEEEEEEEEecC
Confidence 99999999998753335889988754
No 318
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.16 E-value=4.2e-10 Score=88.36 Aligned_cols=141 Identities=17% Similarity=0.205 Sum_probs=72.0
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCC-CcEEEEEEEeee-C
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRH-EPTTLNCKADGY-P 159 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G-~~~~L~C~~~g~-P 159 (238)
.|.|.++..+|+|.|.|........|.+.-.+. ....+. +......+|.+........+..| +.+.|.|.+.|. |
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~--~~~~L~-V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P 155 (232)
T 1dn0_B 79 SLKLSSVTAADTAVYYCARPPHDTSGHYWNYWG--QGTLVT-VSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLP 155 (232)
T ss_dssp EEEECSCCGGGCEEEEEEECSSTTSCSCCSEEC--CCEEEE-ECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBS
T ss_pred EEEECCCCcccCEEEEEEEecCCcCCchhhhcc--cceEEE-EccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeC
Confidence 567777777788887766542100000000000 001111 11111245666532212234578 999999999886 7
Q ss_pred CC-EEEEEe-CCEEeeccCCccEEEecCCcEEE--EEeecCCCC--CCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 160 EP-RIEWYK-DGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKD--TDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 160 ~p-~i~W~~-~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~--~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
.| .+.|++ +|..+......... ..++.... ...|..+.. .|.|.|+|.|.|..|... ....+.|..
T Consensus 156 ~p~~v~W~~~~g~~l~~~~~~~~~-~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~-~~~~i~~~~ 227 (232)
T 1dn0_B 156 DSITFSWKYKNNSDISSTRGFPSV-LRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKE-KNVPLPVIA 227 (232)
T ss_dssp SCCEEEEEETTSCEECCEEECCCE-EETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEE-EEEECCC--
T ss_pred CCeEEEEEcCCCCceeeEEECCcc-ccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcc-eeEecCCCC
Confidence 77 999999 88877530000000 11233222 223555555 689999999999999874 355555443
No 319
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.16 E-value=3.7e-12 Score=109.08 Aligned_cols=88 Identities=19% Similarity=0.295 Sum_probs=55.0
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC--EEEEEeCCEEeeccCCccEEEecCCcEEEEEe--ecCCCCCCCe
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEP--RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSL--VHGKKDTDSG 203 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~v--i~~v~~~d~G 203 (238)
+..+|.+...+.......|+.+.|.|.+.|.+++ .++|+++|..+............+|.+.+... |.....+|.|
T Consensus 333 ~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g 412 (434)
T 1igy_B 333 KPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGN 412 (434)
T ss_dssp CCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTC
T ss_pred CCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCC
Confidence 4567877654433323467789999999996443 89999999887431000001123455443322 3333456799
Q ss_pred EEEEEEEeCCCc
Q psy18191 204 VYWCVARNELGF 215 (238)
Q Consensus 204 ~Y~C~a~N~~G~ 215 (238)
.|+|.|.|....
T Consensus 413 ~YtC~a~n~~l~ 424 (434)
T 1igy_B 413 TFTCSVLHEGLH 424 (434)
T ss_dssp CEEEEEEETTSG
T ss_pred EEEEEEEcCCCC
Confidence 999999998754
No 320
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.16 E-value=1.2e-10 Score=94.22 Aligned_cols=148 Identities=14% Similarity=0.222 Sum_probs=78.4
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCc-ccCCc--eEEeCCCCcceecc--------eecCCccCCEEEeCCCceEEeCCCcE
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTW-QKGLP--LKKYHPPSLPLFPG--------VHGDGYRVPRITEHPASAVVPRHEPT 149 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~-~~G~y--~c~~~~~~~~~~~~--------~~~~v~~~P~i~~~~~~~~~~~G~~~ 149 (238)
..|.|.++.++|+|.|.|...+.. ..|.+ .-.......+.+.. ....+..+|.+...+. ..+.+|+++
T Consensus 79 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v 157 (280)
T 3fku_X 79 AYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTA 157 (280)
T ss_dssp EEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCE
T ss_pred EEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCE
Confidence 468888999999999997766531 00000 00000000001100 0000122455555555 888999999
Q ss_pred EEEEEEee-eC-CCEEEEEeC--CEEeec---c-------CCccEEE-ecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 150 TLNCKADG-YP-EPRIEWYKD--GSLVSA---E-------IGSHRIL-LPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 150 ~L~C~~~g-~P-~p~i~W~~~--g~~l~~---~-------~~~~~~~-~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
.|.|.+.+ .+ .+.+.|++. +..+.. . ...+... ...... .+.|..++.+|+|.|.|.+.|..+
T Consensus 158 ~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~--~L~I~~v~~~DsG~Y~C~~~~~~~ 235 (280)
T 3fku_X 158 TLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTA--SLTITGLQPEDEADYYCSTWDSSL 235 (280)
T ss_dssp EEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEE--EEEECSCCGGGCSEEEEEEEETTT
T ss_pred EEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEE--EEEECCCCHHHCEEEEEEEecCCC
Confidence 99999987 44 488999973 222210 0 0111111 122222 223788899999999999999872
Q ss_pred c--eeEEEEEEEEccCCCC
Q psy18191 215 F--ARSKNATLDVAGKIST 231 (238)
Q Consensus 215 ~--~~s~~~~L~V~~~~~~ 231 (238)
. .....+.|.|...+..
T Consensus 236 ~~~~~g~~t~l~V~~~~~~ 254 (280)
T 3fku_X 236 SAVVFGGGTKLTVLGQPKA 254 (280)
T ss_dssp TEEEEBCCCEEEEC-----
T ss_pred CceEECCCEEEEECCCCCC
Confidence 2 2223457777655433
No 321
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.15 E-value=6.9e-11 Score=94.78 Aligned_cols=129 Identities=16% Similarity=0.210 Sum_probs=73.9
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce-ecCCccCCEEEe-CCCceEEeCCCcEEEEEEEee-
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV-HGDGYRVPRITE-HPASAVVPRHEPTTLNCKADG- 157 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~-~~~v~~~P~i~~-~~~~~~~~~G~~~~L~C~~~g- 157 (238)
..|.|.++..+|+|.|.|...+... .+.-.+... ..+... ......+|.+.. .+....+..|+.+.|.|.+.|
T Consensus 101 ~sL~I~~v~~~D~G~Y~C~~~~~~~--~~~~~~~~~--~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~ 176 (270)
T 3qib_D 101 CSLEIQSSEAGDSALYLCASSLNWS--QDTQYFGPG--TRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF 176 (270)
T ss_dssp EEEEESSCCGGGCEEEEEEEESCTT--CCCCEECCC--EEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEE
T ss_pred EEEEECCCCHhHCeEEEEEEecCCC--ccceEECCc--EEEEEccccccccCCceEEECCCccccccCCceEEEEEecce
Confidence 4577888888888888876653210 000011000 111100 011223676554 344445566999999999988
Q ss_pred eCCC-EEEEEeCCEEeeccCCccEEE---------ecCCcEEEEE--eecCCCCCC-CeEEEEEEEeCCCce
Q psy18191 158 YPEP-RIEWYKDGSLVSAEIGSHRIL---------LPAGSLFFLS--LVHGKKDTD-SGVYWCVARNELGFA 216 (238)
Q Consensus 158 ~P~p-~i~W~~~g~~l~~~~~~~~~~---------~~~~~l~~~~--vi~~v~~~d-~G~Y~C~a~N~~G~~ 216 (238)
.|.| .+.|+++|..+... .... ..++.+.+.. .|.....+| .|.|+|.|.|.....
T Consensus 177 ~P~~~~v~W~k~g~~l~~~---~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 177 YPDHVELSWWVNGKEVHSG---VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp BSSCEEEEEEETTEEECTT---EEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBCT
T ss_pred eCCCeEEEEEECCEECCCC---cccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCCC
Confidence 5667 89999999988642 1110 0234443321 233334555 999999999987654
No 322
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.15 E-value=1.5e-10 Score=91.31 Aligned_cols=131 Identities=14% Similarity=0.151 Sum_probs=73.6
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecce-ecCCccCCEEEeC-CCceEEeCCCcEEEEEEEeee
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGV-HGDGYRVPRITEH-PASAVVPRHEPTTLNCKADGY 158 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~-~~~v~~~P~i~~~-~~~~~~~~G~~~~L~C~~~g~ 158 (238)
..|.|.++..+|+|.|.|...+....|.+.-.... ...+... ......+|.+... +....+..|+.+.|.|.+.|.
T Consensus 74 ~sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~--~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~ 151 (245)
T 3nfj_J 74 FILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGE--GSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGF 151 (245)
T ss_dssp EEEEESSCCGGGCEEEEEEEECCTTTSSCCCEECC--CEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEeeccCCCceeEEECC--CeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccC
Confidence 35788888888999998776551110000001100 0111100 0012246666543 444445569999999999985
Q ss_pred -CCC-EEEEEeCCEEeeccCCccEEEe---------cCCcEEEE--EeecCCCCCC-CeEEEEEEEeCCCce
Q psy18191 159 -PEP-RIEWYKDGSLVSAEIGSHRILL---------PAGSLFFL--SLVHGKKDTD-SGVYWCVARNELGFA 216 (238)
Q Consensus 159 -P~p-~i~W~~~g~~l~~~~~~~~~~~---------~~~~l~~~--~vi~~v~~~d-~G~Y~C~a~N~~G~~ 216 (238)
|++ .+.|+++|..+... ..... .++...+. ..|......| .|.|+|.|.|.....
T Consensus 152 ~p~~~~v~W~k~g~~l~~~---~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 152 FPDHVELSWWVNGKEVHSG---VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp BSSCEEEEEEETTEEECTT---EEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred cCCCEEEEEEECCEECCCC---cccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 444 68999999988642 11100 23444322 1233335566 669999999987654
No 323
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.15 E-value=6.9e-11 Score=91.15 Aligned_cols=83 Identities=25% Similarity=0.392 Sum_probs=66.2
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCE-EEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPR-IEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.+...|....+.+|+++.|.|.+.+.|.|. +.|+++|..+... .+.|. |..++.+|+|.|+|.
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~---------~~~L~----i~~v~~~D~G~Y~C~ 72 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ---------ASSYF----IDAATVDDSGEYRCQ 72 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC---------SSEEE----ESSCCGGGCEEEEEE
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC---------ccEEE----EecccccCCEEEEEE
Confidence 567888888878999999999999999998876 9999999887642 14454 666799999999999
Q ss_pred EEeCCCceeEEEEEEEEccC
Q psy18191 209 ARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~ 228 (238)
|.|...+ ..+.|.|...
T Consensus 73 a~n~~~s---~~~~l~V~~~ 89 (204)
T 3sgj_C 73 TQLSTLS---DPVQLEVHIG 89 (204)
T ss_dssp ETTSBCC---CCEEEEEECS
T ss_pred eCCCccc---ccEEEEEecC
Confidence 9985433 3667777654
No 324
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.15 E-value=1e-10 Score=89.46 Aligned_cols=100 Identities=21% Similarity=0.361 Sum_probs=71.7
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeec---------cCCccEEEecCCcEEEEEeecCCCCC
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSA---------EIGSHRILLPAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~---------~~~~~~~~~~~~~l~~~~vi~~v~~~ 200 (238)
.++.+...+..+.+.+|+++.|.|.+.|.|.|.+.|++++..+.. .....+....++.|. |..++.+
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~----i~~~~~~ 78 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGIT----FKSVTRE 78 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEE----CSCCCTT
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEE----EeeCCHH
Confidence 356677778888999999999999999999999999998755311 001112222335554 6677999
Q ss_pred CCeEEEEEEEeCCCce-eEEEEEEEEccCCCCCC
Q psy18191 201 DSGVYWCVARNELGFA-RSKNATLDVAGKISTAT 233 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~-~s~~~~L~V~~~~~~~~ 233 (238)
|+|.|+|.|.|..|.. .+..+.|.|..++..+.
T Consensus 79 d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~ 112 (209)
T 1nbq_A 79 DTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPT 112 (209)
T ss_dssp SCSEEEEEEEETTSSCEECCEEECCEEBCCCCCC
T ss_pred HCcEEEEEEecCCCCccceEEEEEEEecCCcCCC
Confidence 9999999999987632 22477888877766543
No 325
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.15 E-value=4.4e-10 Score=87.26 Aligned_cols=127 Identities=12% Similarity=0.127 Sum_probs=74.5
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEE-eCCCceEEeCCCcEEEEEEEee-eC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRIT-EHPASAVVPRHEPTTLNCKADG-YP 159 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~-~~~~~~~~~~G~~~~L~C~~~g-~P 159 (238)
.|.|.++..+|+|.|.|...+... +.+ + .....+. +......+|.+. ..+... .+|+.+.|.|.+.| .|
T Consensus 82 sL~I~~v~~~DsG~Y~C~~~~~~~-~~~---~--~~~~~l~-V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P 152 (221)
T 3m8o_H 82 FLQMNSLKSDDTAMYYCVIRGDVY-NRQ---W--GQGTLVT-VSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFP 152 (221)
T ss_dssp EEEECSCCGGGCEEEEEEEESCTT-CCC---B--BCCEEEE-ECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBS
T ss_pred EEEECCCCHHHCEEEEEEEECCCh-hhe---E--CCCEEEE-EecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeEC
Confidence 477788888888888876554210 000 0 0001111 111133566665 333333 78999999999988 67
Q ss_pred C-C-EEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 160 E-P-RIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 160 ~-p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
. | .+.|+++|..+............++...+ ...|..+...|.|.|+|.|.|..+...
T Consensus 153 ~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 153 QEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp SCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 6 4 89999998766421111111012333322 122556678899999999999987763
No 326
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.14 E-value=3.7e-10 Score=86.94 Aligned_cols=94 Identities=20% Similarity=0.318 Sum_probs=62.8
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--E---Eeecc-------CCccEE-EecCCcEEEEEeecCCC
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--S---LVSAE-------IGSHRI-LLPAGSLFFLSLVHGKK 198 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~---~l~~~-------~~~~~~-~~~~~~l~~~~vi~~v~ 198 (238)
|.+...|..+.+.+|+++.|.|.+.+.|.|.+.|+|+. . .+... ...+.. ....+...+ .|..++
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L--~I~~v~ 79 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTL--TISDLE 79 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE--EECSCC
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEE--EECCCC
Confidence 45666677889999999999999999999999999842 1 11110 011111 112222222 378889
Q ss_pred CCCCeEEEEEEEeCCCc--eeEEEEEEEEcc
Q psy18191 199 DTDSGVYWCVARNELGF--ARSKNATLDVAG 227 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~~G~--~~s~~~~L~V~~ 227 (238)
.+|+|.|.|.|.|..+. .....+.|.|..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 80 CADAATYYCQSTYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp GGGCEEEEEEECCSSTTTCEECCCEEEEEEC
T ss_pred hHHCEEEEEecCCCCceeEEeCCCeEEEEeC
Confidence 99999999999998874 222356677754
No 327
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.14 E-value=1.4e-10 Score=93.47 Aligned_cols=142 Identities=10% Similarity=-0.013 Sum_probs=83.5
Q ss_pred EEEecccccccc------ce--EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeC
Q psy18191 66 CLRFQDLLPQSK------QG--LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEH 137 (238)
Q Consensus 66 ~~w~~~~~~~~~------~g--~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~ 137 (238)
+.|++++..+.. .+ ...|.+..+..+|+|.|+|.+.+.. |.. .. ....+. +.......|.+...
T Consensus 28 v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~--g~~---~~--~~~~~~-v~v~~p~~~~~~~~ 99 (289)
T 3mjg_X 28 VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSR--GLE---TD--ERKRLY-IFVPDPTVGFLPND 99 (289)
T ss_dssp CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-----------C--CCEEEE-EECCCTTCCBCCCC
T ss_pred EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccC--CCC---cC--cEEeEE-EEEECCCcCcccCC
Confidence 899999875421 12 2568888999999999998877643 210 00 000111 11100111222111
Q ss_pred CC--ceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCc
Q psy18191 138 PA--SAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGF 215 (238)
Q Consensus 138 ~~--~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~ 215 (238)
+. ...+.+|+.+.|.|.+. .|.|.+.|++++...... .... .... + + ...|+|.|+|.|.|..+.
T Consensus 100 ~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~---~~~~--~~~~-~--~----~~~d~G~Y~C~a~n~~~~ 166 (289)
T 3mjg_X 100 AEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP---VPYD--HQRG-F--S----GIFEDRSYICKTTIGDRE 166 (289)
T ss_dssp HHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC---CCEE--TTTE-E--E----ECCCSSEEEEEEEETTEE
T ss_pred CCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc---eeec--CCcC-e--e----eeccCcEEEEEEEeCCce
Confidence 11 16789999999999998 788999999875222110 0111 1111 1 1 357999999999998887
Q ss_pred eeEEEEEEEEccC
Q psy18191 216 ARSKNATLDVAGK 228 (238)
Q Consensus 216 ~~s~~~~L~V~~~ 228 (238)
..+..+.|.|...
T Consensus 167 ~~s~~~~l~v~~~ 179 (289)
T 3mjg_X 167 VDSDAYYVYRLQV 179 (289)
T ss_dssp EECCCEEEEECCC
T ss_pred eeeeeEEEEecCC
Confidence 7655677877663
No 328
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.14 E-value=5.3e-12 Score=105.14 Aligned_cols=115 Identities=18% Similarity=0.163 Sum_probs=82.3
Q ss_pred cCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecC
Q psy18191 106 KGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPA 185 (238)
Q Consensus 106 ~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~ 185 (238)
.|.|.|.... .. ..+...+..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+.... ........
T Consensus 137 ~~~~~C~~~~-~l---~~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~ 211 (347)
T 2ifg_A 137 EQKLQCHGQG-PL---AHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATV-MKSGGLPS 211 (347)
T ss_dssp GGCCCCSSSS-CS---SCCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEE-CCCCCSSE
T ss_pred ccCCCCCCCh-HH---hcCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccc-ccceeccc
Confidence 4667775544 11 1112235678999988888999999999999999999999999999986544220 00011122
Q ss_pred CcEEEEEeecCCCCCCCe-EEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 186 GSLFFLSLVHGKKDTDSG-VYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 186 ~~l~~~~vi~~v~~~d~G-~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
+.|. |..+..+|+| .|+|.|.|..|... ..+.|.|..+|.
T Consensus 212 ~~L~----i~~v~~~D~G~~Y~C~a~n~~g~~~-~~~~l~V~~~P~ 252 (347)
T 2ifg_A 212 LGLT----LANVTSDLNRKNVTCWAENDVGRAE-VSVQVNVSFPAS 252 (347)
T ss_dssp EEEE----EESCCSTTTTCCEEECCEETTEECC-EEECCCCBEEEE
T ss_pred ceEE----EeeCChHHCCCeEEEEEEcCCCCEE-EEEEEEEcCCCe
Confidence 3344 5666999999 99999999999985 588888766554
No 329
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.14 E-value=8.6e-11 Score=91.77 Aligned_cols=131 Identities=14% Similarity=0.183 Sum_probs=72.5
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcc-cCCceEEeCCCCcceecceecCCccCCEEEe-CCCceEEeCCCcEEEEEEEeee
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQ-KGLPLKKYHPPSLPLFPGVHGDGYRVPRITE-HPASAVVPRHEPTTLNCKADGY 158 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~-~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~-~~~~~~~~~G~~~~L~C~~~g~ 158 (238)
..|.|.++..+|+|.|.|...+... .+.+...... ....+. +......+|.+.. .+.. .+.+|+.+.|.|.+.|.
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~-~~~~L~-V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~ 155 (225)
T 1op3_H 79 VYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWG-PGTVVT-VSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDY 155 (225)
T ss_dssp EEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEEC-CCEEEE-EESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEecCCCccccccceeec-CCEEEe-cccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeE
Confidence 3577778888888888876655210 0000000000 011111 1111123566644 3332 34689999999999987
Q ss_pred -CCC-EEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 159 -PEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 159 -P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
|.| .+.|++++..+....... ....++...+ ...|..+...| |.|+|.|.|..+..
T Consensus 156 ~P~p~~v~W~~~~~~~~~~~~~~-~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 156 FPEPVTVSWNSGALTSGVHTFPA-VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (225)
T ss_dssp BSSCCEEECCTTSCCTTCEECCC-EECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTE
T ss_pred ECCCeEEEEecCCCcCCeEecCc-eeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCc
Confidence 777 999999986532110111 1123443322 22355556678 99999999977654
No 330
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.13 E-value=7.2e-10 Score=76.49 Aligned_cols=92 Identities=23% Similarity=0.383 Sum_probs=58.4
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--E---Eeecc-------CCccEEEecCCcEEEEEeecCCCCCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--S---LVSAE-------IGSHRILLPAGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~---~l~~~-------~~~~~~~~~~~~l~~~~vi~~v~~~d 201 (238)
+...|..+.+.+|+++.|.|.+.+.|.|.+.|+++. . .+... ...+......+.. ..+.|..+..+|
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D 82 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTD-FTLTISSLEPED 82 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSE-EEEEECSCCTTC
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCE-EEEEECCCCHHH
Confidence 444566788999999999999999999999999853 1 12110 0112111111111 123378889999
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 202 SGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
+|.|.|.|.|........-..|.|.
T Consensus 83 sG~Y~C~~~n~~~~~fg~gt~L~V~ 107 (108)
T 1jhl_L 83 FAMYICQQHNEYPWTFGGGTKLEIK 107 (108)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEEC
T ss_pred CEEEEEEEccCCccEECCCEEEEEE
Confidence 9999999999743222224456653
No 331
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.13 E-value=4.2e-10 Score=86.61 Aligned_cols=94 Identities=17% Similarity=0.281 Sum_probs=62.9
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC---E--Eeecc-------CCccEEEe-cCCcEEEEEeecCCC
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG---S--LVSAE-------IGSHRILL-PAGSLFFLSLVHGKK 198 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g---~--~l~~~-------~~~~~~~~-~~~~l~~~~vi~~v~ 198 (238)
|.+...|..+.+.+|+++.|.|.+.+.|.+.+.|+++. . .+... ...+.... ..+... +.|..++
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v~ 79 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSS--FTISSLE 79 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSCC
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEE--EEECCCC
Confidence 45666677889999999999999999999999999832 1 11110 01111111 122222 2378889
Q ss_pred CCCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 199 DTDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
.+|+|.|.|.|.|..+......+.|.|..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3r06_A 80 SEDIGSYYCQQYYNYPWTFGPGTKLEIKR 108 (213)
T ss_dssp GGGCSEEEEEECSSSSCEECCCEEEEECC
T ss_pred cccCEEEEEecccCCceEEcCCceEEEec
Confidence 99999999999998765433456777743
No 332
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.13 E-value=1.1e-10 Score=91.24 Aligned_cols=130 Identities=12% Similarity=0.181 Sum_probs=72.0
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccC----CceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEe
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKG----LPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKAD 156 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G----~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~ 156 (238)
..|.|.++..+|+|.|.|...+.. | .+...... ....+. +......+|.+...+....+.+|+.+.|.|.+.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~--g~~~~~~~~~~~~-~~~~L~-V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~ 155 (228)
T 3bae_H 80 VFMKITSVDTADTATYYCARRGFY--GRKYEVNHFDYWG-QGTTLT-VSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVK 155 (228)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEES--TTCTTSEEEEEEC-CCEEEE-ECSCCCBCCEEEEECC-----CCSEEEEEEEEE
T ss_pred EEEEEcCCCcccCEEEEEEEecCC--CccccccceeeeC-CcEEEE-ecCCCCCCCEEEEecccccccCCCCEEEEEEEc
Confidence 467788888888888887665421 1 00000000 011111 111122467766543334467899999999999
Q ss_pred ee-CCC-EEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 157 GY-PEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 157 g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
|. |.| .+.|++++..+... ...... ..+...+ ...|..+...| |.|+|.|.|..|...
T Consensus 156 g~~P~p~~v~W~~~~~~~~~~-~~~~~~-~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~ 217 (228)
T 3bae_H 156 GYFPEPVTLTWNSGSLSSGVH-TFPAVL-QSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTK 217 (228)
T ss_dssp EEBSSCCEEEEGGGTCCTTEE-EEEEEE-ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred cEeCCCEEEEEeeCCcccCce-EcCcee-CCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCC
Confidence 87 878 99999988653211 011111 2232222 22355556655 999999999998764
No 333
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.12 E-value=1.6e-10 Score=99.48 Aligned_cols=138 Identities=11% Similarity=0.114 Sum_probs=79.3
Q ss_pred EEEcCCCCCCCCCceEEEeCCCccc-----CCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEe
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQK-----GLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKAD 156 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~-----G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~ 156 (238)
.|.|.++..+|+|.|+|.+.+.... +.+... .......+. +......+|.+...+....+.+|+.+.|.|.+.
T Consensus 80 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-~~~~~~~l~-V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~ 157 (457)
T 1hzh_H 80 YMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMD-VWGKGTTVI-VSSASTKGPSVFPLAPSSKSTSGGTAALGCLVK 157 (457)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCC-BCCCCEEEE-ECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEecCCccccccccccccc-eECCcEEEE-ecCCCCCCCeEEecCccccccCCCcEEEEEEEe
Confidence 5778888888888888776653110 000000 000111111 111122367665544444568999999999998
Q ss_pred ee-CC-CEEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEE
Q psy18191 157 GY-PE-PRIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFARSKNATLD 224 (238)
Q Consensus 157 g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~ 224 (238)
|. |. |.+.|++++..+... ........++.... .+.|..+..+| |.|+|.|.|..|... ....|.
T Consensus 158 g~~P~~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~-~~~~v~ 226 (457)
T 1hzh_H 158 DYFPEPVTVSWNSGALTSGVH-TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKKAE 226 (457)
T ss_dssp SBBSCCCEEEETTTTBCTTEE-EEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEE-EEEECC
T ss_pred EEeCCCeEEEEEeCCEeccce-EcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcc-eeEEec
Confidence 87 64 899999998654311 01112223343221 22366778889 999999999887764 244444
No 334
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.11 E-value=3.7e-10 Score=86.90 Aligned_cols=93 Identities=18% Similarity=0.338 Sum_probs=62.9
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--EEe----------eccCCccEEEe-cCCcEEEEEeecCCCCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--SLV----------SAEIGSHRILL-PAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~~l----------~~~~~~~~~~~-~~~~l~~~~vi~~v~~~ 200 (238)
+...|..+.+.+|+++.|.|.+.|.|.|.+.|++++ ..+ ......+.... ..+... +.|..++.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v~~~ 81 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFT--LSINSVETE 81 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE--EEESSCCGG
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEE--EEECCCChh
Confidence 444567788999999999999999999999999843 211 00001122111 222222 237888999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|+|.|.|.|.|..|...+..+.|.|...
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 109 (213)
T 3d9a_L 82 DFGMYFCQQSNSWPYTFGGGTKLEIKRA 109 (213)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEECCC
T ss_pred hCEEEEEeeecCCcceeCCCEEEEEecC
Confidence 9999999999998875433557777653
No 335
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.10 E-value=2.6e-10 Score=84.62 Aligned_cols=83 Identities=20% Similarity=0.378 Sum_probs=64.2
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeC-CCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYP-EPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P-~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.+...|....+.+|+.+.|.|.+.+.| .+.+.|+++|..+... .+.+.+..+ +.+|+|.|+|.
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~---------~~~~~~~~~----~~~d~G~Y~C~ 69 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH---------TQPSYRFKA----NNNDSGEYTCQ 69 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC---------CSSEEEEEC----CGGGCEEEEEE
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC---------ccceEEEec----ccccCeEEEEE
Confidence 357777778888899999999999999987 6799999999887642 334444444 99999999999
Q ss_pred EEeCCCceeEEEEEEEEccC
Q psy18191 209 ARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~ 228 (238)
|.|..++. .+.|.|..+
T Consensus 70 ~~~~~~s~---~~~l~v~~~ 86 (170)
T 3ry4_A 70 TGQTSLSD---PVHLTVLFE 86 (170)
T ss_dssp ETTSBCCC---CEEEEEECC
T ss_pred EeCCCceE---eEEEEEECC
Confidence 99865544 556666553
No 336
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.10 E-value=9.1e-10 Score=88.20 Aligned_cols=76 Identities=12% Similarity=0.302 Sum_probs=48.8
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCC--CEEEEEeC--CEEee---c--------------cCCccEEEec-CCcEEEEEee
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPE--PRIEWYKD--GSLVS---A--------------EIGSHRILLP-AGSLFFLSLV 194 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~--p~i~W~~~--g~~l~---~--------------~~~~~~~~~~-~~~l~~~~vi 194 (238)
.+....+.+|+++.|.|.+.|.|. +.+.|+++ +..+. . ....+..... .......+.|
T Consensus 157 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 236 (268)
T 1x9q_A 157 ETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQM 236 (268)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred CCCceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEE
Confidence 345678999999999999988764 89999985 22221 0 0011111111 1100112337
Q ss_pred cCCCCCCCeEEEEEEEeC
Q psy18191 195 HGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 195 ~~v~~~d~G~Y~C~a~N~ 212 (238)
..++.+|+|.|.|.|.|.
T Consensus 237 ~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 237 NNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp CSCCGGGCEEEEEEEEET
T ss_pred CCCCHHHCEEEEEEEccC
Confidence 888999999999999985
No 337
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.10 E-value=4.5e-11 Score=89.64 Aligned_cols=81 Identities=26% Similarity=0.435 Sum_probs=61.9
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+|.+...|....+.+|+++.|.|.+.+.|.| .+.|++++..+... ++.|. |..++.+|+|.|+|.
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~---------~~~L~----i~~v~~~d~G~Y~C~ 69 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET---------NSSLN----IVNAKFEDSGEYKCQ 69 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC---------SSEEE----ECSCCGGGCEEEEEE
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC---------ceEEE----EeccceecCEEEEEE
Confidence 57888888888899999999999999998886 69999999877631 34454 566699999999999
Q ss_pred EEeCCCceeEEEEEEEEc
Q psy18191 209 ARNELGFARSKNATLDVA 226 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~ 226 (238)
|.|..++. .+.|.|.
T Consensus 70 ~~~~~~s~---~~~l~V~ 84 (176)
T 1f2q_A 70 HQQVNESE---PVYLEVF 84 (176)
T ss_dssp CTTSSCCC---CEEEEEE
T ss_pred cCCccccc---cEEEEEe
Confidence 99977654 4556665
No 338
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.08 E-value=9.9e-10 Score=97.35 Aligned_cols=145 Identities=14% Similarity=0.110 Sum_probs=84.5
Q ss_pred CCCccEEEecccccccc------------ce---E---EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceec
Q psy18191 61 YPKPICLRFQDLLPQSK------------QG---L---MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFP 122 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~------------~g---~---~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~ 122 (238)
.+.+.+.||+++..... .+ + ..|.+.+++.+|+|.|+|...+.. |..... ...+.
T Consensus 394 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~--~~~~~~-----~~~l~ 466 (581)
T 3o3u_N 394 KPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMNRN--GKETKS-----NYRVR 466 (581)
T ss_dssp SSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEECTT--SCEEEE-----EEEEE
T ss_pred CCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEcCC--CceeEE-----EEEEE
Confidence 56778999998652100 11 0 147778888888888887766532 211000 00111
Q ss_pred ceecCCccCCEEEeCCCceEEeCCCcE-EEEEEEee-eCCCEEEEEeCCEEeeccCCccEEE----e--cCCcEEE--EE
Q psy18191 123 GVHGDGYRVPRITEHPASAVVPRHEPT-TLNCKADG-YPEPRIEWYKDGSLVSAEIGSHRIL----L--PAGSLFF--LS 192 (238)
Q Consensus 123 ~~~~~v~~~P~i~~~~~~~~~~~G~~~-~L~C~~~g-~P~p~i~W~~~g~~l~~~~~~~~~~----~--~~~~l~~--~~ 192 (238)
+.. ...+|.+... ...+..|+.. .|.|.+.| .|.|.++|+++|..+........+. . ..|.... .+
T Consensus 467 -V~~-~~~~p~i~~~--~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L 542 (581)
T 3o3u_N 467 -VYQ-IPGKPEIVDS--ASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSEL 542 (581)
T ss_dssp -EEB-CCCCCEEESC--CSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEE
T ss_pred -EEc-CCCCCEEEcC--CcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEE
Confidence 111 1234555443 2335566555 56999988 5999999999999987542222111 1 3343332 23
Q ss_pred eecCCCCCC-CeEEEEEEEeCCCce
Q psy18191 193 LVHGKKDTD-SGVYWCVARNELGFA 216 (238)
Q Consensus 193 vi~~v~~~d-~G~Y~C~a~N~~G~~ 216 (238)
.|..+..+| .|.|+|.|.|..+..
T Consensus 543 ~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 543 MVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp EECCCTTSCSCCCEEEEEECSSCSS
T ss_pred EEEeccccCCCceEEEEEeccCCCC
Confidence 356666445 789999999997544
No 339
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.08 E-value=6e-10 Score=80.11 Aligned_cols=96 Identities=19% Similarity=0.362 Sum_probs=60.4
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEE---eeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSL---VSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~---l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
.+...|..+.+.+|+++.|.|.+.+. +.+.|+++ +.. +... ..+.....++.. ..+.|..++.+|+|.|.|
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~-~~r~~~~~~~~~-~~L~I~~~~~~DsG~Y~C 94 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSE-EGRIVQTQNGSV-YTLTIQNIQYEDNGIYFC 94 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCT-TTTEEEEEETTE-EEEEECSCCGGGCEEEEE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEe-CCCEEEEcCCCE-EEEEECCCChHHCEEEEE
Confidence 45666778899999999999999887 89999987 322 2111 222222222322 222378889999999999
Q ss_pred EEEeCCCce---eEEEEEEEEccCCCCC
Q psy18191 208 VARNELGFA---RSKNATLDVAGKISTA 232 (238)
Q Consensus 208 ~a~N~~G~~---~s~~~~L~V~~~~~~~ 232 (238)
.|.|..|.. ....+.|.|.+.+.+.
T Consensus 95 ~a~n~~g~~~~~~g~gt~L~V~~~p~~~ 122 (133)
T 3khq_A 95 KQKCDSANHNVTDSCGTELLVLGFSTLD 122 (133)
T ss_dssp EESSCC-------CCCEEEEEC------
T ss_pred EEEeCCCCcceeECCCEEEEEEecccch
Confidence 999987631 1235788888765443
No 340
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.08 E-value=7.1e-10 Score=85.34 Aligned_cols=92 Identities=20% Similarity=0.385 Sum_probs=61.4
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEE---eecc-------CCccEE-EecCCcEEEEEeecCCCCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSL---VSAE-------IGSHRI-LLPAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~---l~~~-------~~~~~~-~~~~~~l~~~~vi~~v~~~ 200 (238)
+...+ .+.+.+|+++.|.|.+.|.|.+.+.|++. +.. +... ...+.. ....+...+ .|..++.+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L--~I~~v~~~ 80 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATL--TISKAQAG 80 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEE--EESSCCGG
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEE--EECCCChh
Confidence 34445 67889999999999999999999999982 211 1110 011111 112222222 37888999
Q ss_pred CCeEEEEEEEeCCC--ceeEEEEEEEEccC
Q psy18191 201 DSGVYWCVARNELG--FARSKNATLDVAGK 228 (238)
Q Consensus 201 d~G~Y~C~a~N~~G--~~~s~~~~L~V~~~ 228 (238)
|+|.|.|.|.|..| ......+.|.|...
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 110 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQ 110 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEECS
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEeCC
Confidence 99999999999998 23234678888743
No 341
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.08 E-value=2.2e-10 Score=98.06 Aligned_cols=123 Identities=13% Similarity=0.125 Sum_probs=71.4
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~ 160 (238)
.|.|.++..+|+|.|.|.+.+.. +.+ .....+. +......+|.+...+....+.+|+.+.|.|.+.|. |.
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~--~~~------~~~~~l~-V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~ 149 (434)
T 1igy_B 79 NIHLSSLTSDDSAVYYCVREGEV--PYW------GQGTTVT-VSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPE 149 (434)
T ss_dssp CEEECSBCGGGCSEECCCCSSSS--CCC------CCCEECE-ECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSS
T ss_pred EEEECCCChHHCEEEEEEEEccc--ccc------CCceEEE-EccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCC
Confidence 46677777888888886555421 100 0011111 11111235655433323345789999999999987 77
Q ss_pred C-EEEEEeCCEEeeccCCccEEEecCCcEE--EEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 161 P-RIEWYKDGSLVSAEIGSHRILLPAGSLF--FLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 161 p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~--~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
| .+.|++++..+....... . ...+... ..+.|..+..+| |.|+|.|.|..|..
T Consensus 150 p~~v~W~k~~~~~~~~~~~~-~-~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~ 205 (434)
T 1igy_B 150 PVTVTWNSGSLSSGVHTFPA-V-LQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASST 205 (434)
T ss_dssp CCEEEETTTTBCSSEEECCC-E-ECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTC
T ss_pred CeEEEEeeCCcCCCeEecCc-e-ecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCc
Confidence 7 999999987532110000 1 1112222 122356678788 99999999999985
No 342
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.07 E-value=6.3e-10 Score=87.52 Aligned_cols=92 Identities=22% Similarity=0.252 Sum_probs=64.0
Q ss_pred EeCCCceEEeCCCcEEEEEEEee---eCCCEEEEEeCCEEee----cc-----------------------CCccEEEec
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADG---YPEPRIEWYKDGSLVS----AE-----------------------IGSHRILLP 184 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g---~P~p~i~W~~~g~~l~----~~-----------------------~~~~~~~~~ 184 (238)
...+..+.+.+|+++.|.|.+.+ .|.|.+.|++++.... .. ....+..+.
T Consensus 6 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 85 (250)
T 2fbo_J 6 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA 85 (250)
T ss_dssp ECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECS
T ss_pred EcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEec
Confidence 34455788999999999999988 8899999999874320 00 001111111
Q ss_pred ---CCcEEEEEeecCCCCCCCeEEEEEEEeCCCcee----EEEEEEEEccCCC
Q psy18191 185 ---AGSLFFLSLVHGKKDTDSGVYWCVARNELGFAR----SKNATLDVAGKIS 230 (238)
Q Consensus 185 ---~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~----s~~~~L~V~~~~~ 230 (238)
+..|. |..++.+|+|.|+|.|.|..+... +..+.|.|..++.
T Consensus 86 ~~~~~~L~----I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~ 134 (250)
T 2fbo_J 86 NLAAPTLR----LTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTP 134 (250)
T ss_dssp CTTSCCEE----ECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSC
T ss_pred cCCcceEE----EeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCC
Confidence 13444 677799999999999999887531 2488899987643
No 343
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.07 E-value=5.5e-09 Score=75.28 Aligned_cols=94 Identities=16% Similarity=0.230 Sum_probs=62.7
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCC---CEEEEEeCCE--Eee-c-c-----------CCccEEEecC----CcEEEE
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPE---PRIEWYKDGS--LVS-A-E-----------IGSHRILLPA----GSLFFL 191 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~---p~i~W~~~g~--~l~-~-~-----------~~~~~~~~~~----~~l~~~ 191 (238)
+...+..+.+..|+++.|.|.+.+.+. +.+.|++++. .+. . . ..++.....+ +...
T Consensus 9 V~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~s-- 86 (139)
T 1pko_A 9 VIGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVA-- 86 (139)
T ss_dssp EECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEE--
T ss_pred EECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEE--
Confidence 344455788999999999999976543 7899999764 111 0 0 0111111111 2222
Q ss_pred EeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 192 SLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 192 ~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
+.|..++.+|+|.|.|.+.|..|... ..+.|.|..+..
T Consensus 87 L~I~~v~~~D~G~Y~C~v~~~~~~~~-~~~~L~V~~P~~ 124 (139)
T 1pko_A 87 LRIQNVRFSDEGGYTCFFRDHSYQEE-AAVELKVEDPFY 124 (139)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEE-EEEEEEEECTTT
T ss_pred EEEccCCHHHCEEEEEEEEcCCCceE-EEEEEEEecCcC
Confidence 23788899999999999999998775 589999985543
No 344
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.07 E-value=6.1e-10 Score=86.24 Aligned_cols=86 Identities=15% Similarity=0.170 Sum_probs=63.6
Q ss_pred eCCCc-eEEeCCCcEEEEEEEeeeCCC--EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 136 EHPAS-AVVPRHEPTTLNCKADGYPEP--RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 136 ~~~~~-~~~~~G~~~~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
..+.. +.+..|+++.|.|.+ |.|.| .|.|++.+..+. .......+..|. |.+++.+|.|.|.|.|.|.
T Consensus 11 ~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~----~~~~~~~~~~L~----I~~v~~~d~G~Y~C~a~n~ 81 (210)
T 1gsm_A 11 EPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSLG----AVQSDTGRSVLT----VRNASLSAAGTRVCVGSCG 81 (210)
T ss_dssp ESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTC----CEEEESSEEEEE----ECSCCGGGCEEEEEEEEET
T ss_pred eCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeecccccC----cEEecCCccEEE----ECccCcccCceEEEEEEeC
Confidence 34443 688999999999999 99888 999998653331 111111122333 6677999999999999999
Q ss_pred CCceeEEEEEEEEccCCCC
Q psy18191 213 LGFARSKNATLDVAGKIST 231 (238)
Q Consensus 213 ~G~~~s~~~~L~V~~~~~~ 231 (238)
.|... +.+.|.|..+|..
T Consensus 82 ~~~~~-~~~~ltV~~~P~~ 99 (210)
T 1gsm_A 82 GRTFQ-HTVQLLVYAFPNQ 99 (210)
T ss_dssp TEEEE-EEEEEEEEBCCSE
T ss_pred CCceE-EEEEEEEEecCCC
Confidence 98875 6999999887753
No 345
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.07 E-value=1e-09 Score=84.34 Aligned_cols=92 Identities=17% Similarity=0.317 Sum_probs=61.8
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEEe---ec-------cCCccEEEe-cCCcEEEEEeecCCCCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSLV---SA-------EIGSHRILL-PAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~l---~~-------~~~~~~~~~-~~~~l~~~~vi~~v~~~ 200 (238)
+.. |..+.+.+|+++.|.|.+.|.|.|.+.|+++ |..+ .. ....+.... ..+... +.|..++.+
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v~~~ 80 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFT--LTIDPVEAD 80 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSCCGG
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEE--EEECCCCHH
Confidence 344 6778899999999999999999999999984 2221 10 001121111 122222 237888999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|+|.|.|.|.|..|......+.|.|...
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 108 (210)
T 1lk3_L 81 DTAIYFCQQSWNGPLTFGAGTKLELKRA 108 (210)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEECCC
T ss_pred HCeEEEEEEEcCCCceeCCCEEEEEcCC
Confidence 9999999999988765433557777653
No 346
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.07 E-value=3.4e-09 Score=82.00 Aligned_cols=136 Identities=13% Similarity=-0.003 Sum_probs=81.5
Q ss_pred cEEEecccccccc----ceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeC-CC
Q psy18191 65 ICLRFQDLLPQSK----QGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEH-PA 139 (238)
Q Consensus 65 ~~~w~~~~~~~~~----~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~-~~ 139 (238)
.+.|++...++.. .+-..|.+.+++.+|.|.|.|.+.+.. |. ....+.+.+..+|..... +.
T Consensus 39 ~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~--~~-----------~~~~~~ltV~~~P~~~~i~~~ 105 (210)
T 1gsm_A 39 SVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGG--RT-----------FQHTVQLLVYAFPNQLTVSPA 105 (210)
T ss_dssp EEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETT--EE-----------EEEEEEEEEEBCCSEEEEESS
T ss_pred ceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCC--Cc-----------eEEEEEEEEEecCCCcEEccc
Confidence 8999996543311 123457788999999999998776532 11 111222335567765432 32
Q ss_pred ceEEeCCCcEEEEEEEeee-CC----CEEEEEeCCEEeeccCC-ccEEE--------ecCCcEEEEEe--ecCCCCCCCe
Q psy18191 140 SAVVPRHEPTTLNCKADGY-PE----PRIEWYKDGSLVSAEIG-SHRIL--------LPAGSLFFLSL--VHGKKDTDSG 203 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~-P~----p~i~W~~~g~~l~~~~~-~~~~~--------~~~~~l~~~~v--i~~v~~~d~G 203 (238)
....|+.. |.|.+.|. |. +++.|+|++..|..... ..... .......+... +......|.+
T Consensus 106 --~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~ 182 (210)
T 1gsm_A 106 --ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPP 182 (210)
T ss_dssp --SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCS
T ss_pred --eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCc
Confidence 55678888 99999986 64 48999999999864210 11110 01223332222 2233445557
Q ss_pred EEEEEEEeCCCce
Q psy18191 204 VYWCVARNELGFA 216 (238)
Q Consensus 204 ~Y~C~a~N~~G~~ 216 (238)
.|+|.|.+.+-..
T Consensus 183 ~~tC~a~~~L~~~ 195 (210)
T 1gsm_A 183 ALYCQATMRLPGL 195 (210)
T ss_dssp EEEEEEEEEETTE
T ss_pred eEEEEEEeeCCCC
Confidence 9999999987444
No 347
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.06 E-value=1.1e-09 Score=87.80 Aligned_cols=124 Identities=15% Similarity=0.233 Sum_probs=69.1
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecC---------------CccCCEEEeCCCceEEeC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGD---------------GYRVPRITEHPASAVVPR 145 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~---------------v~~~P~i~~~~~~~~~~~ 145 (238)
..|.|.++.++|+|.|.|...+.. +. .+. ....+.+.... ....+.+.. +....+.+
T Consensus 81 ~~L~I~~v~~~DsG~Y~C~~~~~~--~~---~~~--~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 152 (264)
T 2gjj_A 81 FTLTIGSVKAEDLAVYYCQQYSNY--PW---TFG--GGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQ-SGPEVVKT 152 (264)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSS--SC---EEC--CCEEEEEECC-------------------CCEEEE-CCCEEECT
T ss_pred EEEEECCCCHHHCEEEEEEEecCC--cc---Eec--CCEEEEEEcCCcccccccccccccccccCcEEEeC-CCCEEEcC
Confidence 367888888999999997766531 10 000 00011100000 001122333 33457899
Q ss_pred CCcEEEEEEEeeeCC--CEEEEEeCC--EE---eec---cC---------Ccc-EEEecCCcEEEEEeecCCCCCCCeEE
Q psy18191 146 HEPTTLNCKADGYPE--PRIEWYKDG--SL---VSA---EI---------GSH-RILLPAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 146 G~~~~L~C~~~g~P~--p~i~W~~~g--~~---l~~---~~---------~~~-~~~~~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
|+++.|.|.+.+.|. +.+.|+++. .. +.. .. ..+ .+..........+.|..++.+|+|.|
T Consensus 153 G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 232 (264)
T 2gjj_A 153 GASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADY 232 (264)
T ss_dssp TCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEE
Confidence 999999999998874 899999863 21 210 00 111 11111111112233788899999999
Q ss_pred EEEEEeC
Q psy18191 206 WCVARNE 212 (238)
Q Consensus 206 ~C~a~N~ 212 (238)
.|.|.|.
T Consensus 233 ~C~a~n~ 239 (264)
T 2gjj_A 233 YCVRSGN 239 (264)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 9999995
No 348
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.05 E-value=3e-10 Score=90.01 Aligned_cols=96 Identities=18% Similarity=0.226 Sum_probs=66.7
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
...+|.|...|.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+............++.|. |..++.+|+|.|+|
T Consensus 4 ~~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~----I~~v~~~DsG~Y~C 77 (242)
T 1p6f_A 4 TLPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFY----IPDMNSRMAGQYSC 77 (242)
T ss_dssp CCCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEE----ECSCCGGGCEEEEE
T ss_pred CCCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEE----ecCCCcccCeEEEE
Confidence 3468888887776 8899999999999865 4578999999987652100000001112232 67779999999999
Q ss_pred EEEeCCCce-eEEEEEEEEccCC
Q psy18191 208 VARNELGFA-RSKNATLDVAGKI 229 (238)
Q Consensus 208 ~a~N~~G~~-~s~~~~L~V~~~~ 229 (238)
.+.|..+.. .+..+.|.|.+..
T Consensus 78 ~~~~~~~~s~~S~~~~L~V~~~~ 100 (242)
T 1p6f_A 78 IYRVGELWSEPSNLLDLVVTEMY 100 (242)
T ss_dssp EEEETTEECCCCCCEEEEEECCS
T ss_pred EEecCCccccCCcceEEEeeccc
Confidence 999976532 2457888887644
No 349
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.05 E-value=7.9e-10 Score=87.79 Aligned_cols=125 Identities=14% Similarity=0.139 Sum_probs=68.2
Q ss_pred EEcCCCCCCCCCceEEEeCCCcccCC-ceEEeCCCCcceecce-ecCCccCCEEEeC-CCceEEeCCCcEEEEEEEee-e
Q psy18191 83 LVGSQASPDYPNRFSLCNNKTWQKGL-PLKKYHPPSLPLFPGV-HGDGYRVPRITEH-PASAVVPRHEPTTLNCKADG-Y 158 (238)
Q Consensus 83 l~~~~~~~~~~g~y~~~~~~~~~~G~-y~c~~~~~~~~~~~~~-~~~v~~~P~i~~~-~~~~~~~~G~~~~L~C~~~g-~ 158 (238)
|.|.++..+|+|.|.|...+.. .|. +.-.+... ..+... ......+|.+... +....+..|+.+.|.|.+.| .
T Consensus 76 L~I~~v~~~DsG~Y~C~~~~~~-~~~~~~~~~~~~--t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~ 152 (253)
T 3to4_D 76 LRLQVANMSQGRTLYCTSSADH-WTNTGQLYFGEG--SKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFY 152 (253)
T ss_dssp CEEEEESCSSCEEEEEEEECSC-CSTTCCEEECCC--EEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEB
T ss_pred EEEccCChhhCeEEEEEEecCC-CCcccceEECCC--EEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEE
Confidence 5666777777788776554321 000 00011011 111110 1112356766543 33334445789999999988 5
Q ss_pred CCC-EEEEEeCCEEeeccCCccEEEe---------cCCcEEEEEe--ecCCCCCC-CeEEEEEEEeCC
Q psy18191 159 PEP-RIEWYKDGSLVSAEIGSHRILL---------PAGSLFFLSL--VHGKKDTD-SGVYWCVARNEL 213 (238)
Q Consensus 159 P~p-~i~W~~~g~~l~~~~~~~~~~~---------~~~~l~~~~v--i~~v~~~d-~G~Y~C~a~N~~ 213 (238)
|.| .++|+++|..+... ..... .++.+.+... |......| .|.|+|.+.|..
T Consensus 153 P~~i~v~W~k~g~~l~~~---~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 153 PDHVELSWWVNGKEVHSG---VSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp SSCEEEEEEETTEEECTT---EEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CCcEEEEEEECCEECCCc---eecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 667 89999999988642 11100 3454433221 33334455 679999999975
No 350
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.05 E-value=8e-10 Score=84.55 Aligned_cols=90 Identities=17% Similarity=0.190 Sum_probs=63.8
Q ss_pred CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeecc-----------------CCccEEEecCCcEEEEEeecCCCCCC
Q psy18191 139 ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAE-----------------IGSHRILLPAGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~-----------------~~~~~~~~~~~~l~~~~vi~~v~~~d 201 (238)
....+.+|+++.|.|.+.+.|.+.+.|++++...... ...+.....++.|. |..++.+|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~----i~~v~~~D 82 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLL----FQMITMKD 82 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEE----ECSCCGGG
T ss_pred ccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEE----EccccccC
Confidence 4467889999999999889999999999875322110 01122233445665 56669999
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 202 SGVYWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
+|.|+|.+.|..+...+..+.|.|..++..+
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p 113 (208)
T 3r4d_A 83 MGVYTLDMTDENYRRTQATVRFHVHQPVTQP 113 (208)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEECCCCCC
T ss_pred CeEEEEEEEcccCceeEEEEEEEeccCCCCC
Confidence 9999999999964443468889997765443
No 351
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.04 E-value=5.2e-10 Score=85.34 Aligned_cols=89 Identities=16% Similarity=0.079 Sum_probs=64.9
Q ss_pred CCCceEEeCCCcEEEEEEEee-eCCCEEEEEeCCEEeecc---C---------C----ccEEEecCCcEEEEEeecCCCC
Q psy18191 137 HPASAVVPRHEPTTLNCKADG-YPEPRIEWYKDGSLVSAE---I---------G----SHRILLPAGSLFFLSLVHGKKD 199 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g-~P~p~i~W~~~g~~l~~~---~---------~----~~~~~~~~~~l~~~~vi~~v~~ 199 (238)
.|..+.+.+|+++.|.|.+.+ .+.+.+.|++++..+... . . .+.....++.|. |..++.
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~----I~~v~~ 79 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQ----LSNLKM 79 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEE----ECSCCG
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEE----ECCCCc
Confidence 355678899999999999875 556899999998755310 0 0 111222355665 566699
Q ss_pred CCCeEEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 200 TDSGVYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 200 ~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
+|+|.|.|.|.|..|... ..+.|.|..++.
T Consensus 80 ~D~G~Y~C~~~~~~~~~~-~~~~L~V~~~~~ 109 (193)
T 2if7_A 80 EDTGSYRAQISTKTSAKL-SSYTLRILRQLR 109 (193)
T ss_dssp GGCEEEEEEEECSSCEEE-EEEEEEEECCCE
T ss_pred ccCceEEEEEEecCCCeE-EEEEEEEEccCC
Confidence 999999999999999875 488899876543
No 352
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.04 E-value=1.8e-09 Score=76.14 Aligned_cols=99 Identities=15% Similarity=0.265 Sum_probs=59.1
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEEEeecCCCCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~~vi~~v~~~ 200 (238)
+...|..+.+.+|++++|.|.+.+.+.+.+.|++.. . .+... ...+.... ..+... +.|..++.+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~--L~I~~v~~~ 81 (120)
T 1mqk_L 4 LTQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFS--LKINSLLPE 81 (120)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSCCGG
T ss_pred eEecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEE--EEECCCCHH
Confidence 344566788999999999999998888899999843 2 12110 01111111 122222 237888999
Q ss_pred CCeEEEEEEEeCC-CceeEEEEEEEEccCCCCCCC
Q psy18191 201 DSGVYWCVARNEL-GFARSKNATLDVAGKISTATD 234 (238)
Q Consensus 201 d~G~Y~C~a~N~~-G~~~s~~~~L~V~~~~~~~~~ 234 (238)
|+|.|.|.+.|.. ......-..|.|.+....|.+
T Consensus 82 DsG~Y~C~~~~~~~~~~fg~gt~L~V~~~~~~~~~ 116 (120)
T 1mqk_L 82 DFGSYYCQHHYGTPPLTFGGGTKLEIKREQKLISE 116 (120)
T ss_dssp GCEEEEEEECSSSSSCCBCCCEEEEEC--------
T ss_pred HCEEEEEEEEeCCCceEECCCeEEEEecCCCCCch
Confidence 9999999999854 212123557888776655544
No 353
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.04 E-value=1.2e-10 Score=76.18 Aligned_cols=60 Identities=22% Similarity=0.364 Sum_probs=47.8
Q ss_pred CCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCC-CCCCCeEEEEEEEe
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGK-KDTDSGVYWCVARN 211 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v-~~~d~G~Y~C~a~N 211 (238)
|....+..|++++|.|.+.|.|. |+|+|+|..+... .++.|. |..+ ..+|+|.|+|.|.+
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~--------~~~~L~----I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK--------HDKHLV----LQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC--------CSSCCB----CCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC--------CCCEEE----ECccCccCcCEEEEEEEcc
Confidence 44566778999999999999984 9999999988632 345554 5664 67999999999976
No 354
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.04 E-value=8e-10 Score=77.64 Aligned_cols=87 Identities=23% Similarity=0.279 Sum_probs=60.0
Q ss_pred eCCCceEEeCCCcEEEEEEEeeeCC----CEEEEEeCC-------EEeecc------------CCccEEEecC------C
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGYPE----PRIEWYKDG-------SLVSAE------------IGSHRILLPA------G 186 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~P~----p~i~W~~~g-------~~l~~~------------~~~~~~~~~~------~ 186 (238)
..+..+.+.+|+++.|.|.+.+.|. +.+.|++++ ..+... ...+.....+ .
T Consensus 10 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 89 (126)
T 1eaj_A 10 TPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDA 89 (126)
T ss_dssp SSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBC
T ss_pred CCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeE
Confidence 3345678899999999999987765 459999864 222110 0112222221 3
Q ss_pred cEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 187 SLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 187 ~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
+|. |..++.+|+|.|.|.+.|..|... ..+.|.|..
T Consensus 90 sL~----I~~v~~~D~G~Y~C~v~~~~~~~~-~~~~L~V~~ 125 (126)
T 1eaj_A 90 SIN----VTNLQLSDIGTYQCKVKKAPGVAN-KKIHLVVLV 125 (126)
T ss_dssp CEE----ECSCCGGGCEEEEEEEEETTEEEE-EEEEEEEEC
T ss_pred EEE----ECcCChHHCeEEEEEEEcCCccCC-cEEEEEEEc
Confidence 344 677799999999999999988875 589998864
No 355
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.04 E-value=5.7e-10 Score=84.61 Aligned_cols=90 Identities=17% Similarity=0.169 Sum_probs=66.6
Q ss_pred CceEEeCCCcEEEEEEEe--eeCCCEEEEEe--CCEEeec--------cCCccEEEecCCcEEEEEeecCCCCCCCeEEE
Q psy18191 139 ASAVVPRHEPTTLNCKAD--GYPEPRIEWYK--DGSLVSA--------EIGSHRILLPAGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~--g~P~p~i~W~~--~g~~l~~--------~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
..+....|+++.|.|... +.|.|.|.|++ ++..|.. ....+.....+|+|. |..++.+|+|.|+
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~----I~~v~~~DsG~Y~ 82 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLK----IKHLKTDDQDIYK 82 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEE----ECSCCGGGCEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEE----ECCCChhhCEEEE
Confidence 456778999999999643 35678999999 8877631 113445556778887 5566999999999
Q ss_pred EEEEeCCCcee-EEEEEEEEccCCCCC
Q psy18191 207 CVARNELGFAR-SKNATLDVAGKISTA 232 (238)
Q Consensus 207 C~a~N~~G~~~-s~~~~L~V~~~~~~~ 232 (238)
|.|.|..|... ...+.|.|..+.+.|
T Consensus 83 c~~~n~~g~~~~~~~~~L~V~~~~~~P 109 (182)
T 1hnf_A 83 VSIYDTKGKNVLEKIFDLKIQERVSKP 109 (182)
T ss_dssp EEEEETTSCEEEEEEEEEEEECCCCCC
T ss_pred EEEEeCCCceeEEEEEEEEEcCcCCCC
Confidence 99999998863 246788888765444
No 356
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.04 E-value=8.9e-10 Score=84.99 Aligned_cols=95 Identities=16% Similarity=0.231 Sum_probs=61.7
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeee-CCCEEEEEeCC---E--EeeccCC-----------ccEEE-ecCCcEEEEEe
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGY-PEPRIEWYKDG---S--LVSAEIG-----------SHRIL-LPAGSLFFLSL 193 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~p~i~W~~~g---~--~l~~~~~-----------~~~~~-~~~~~l~~~~v 193 (238)
|.+...| .+.+.+|+++.|.|.+.+. |.+.+.|++.. . .+..... .+... ...+... +.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~ 78 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRY--LS 78 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEE--EE
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEE--EE
Confidence 3455556 7889999999999999999 99999999831 1 1110000 11111 1122222 23
Q ss_pred ecCCCCCCCeEEEEEEEeCCCc----eeEEEEEEEEccCC
Q psy18191 194 VHGKKDTDSGVYWCVARNELGF----ARSKNATLDVAGKI 229 (238)
Q Consensus 194 i~~v~~~d~G~Y~C~a~N~~G~----~~s~~~~L~V~~~~ 229 (238)
|..++.+|+|.|.|.|.|..|. .....+.|.|...+
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~ 118 (218)
T 3s96_B 79 ISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQP 118 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCC
T ss_pred EccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCC
Confidence 7888999999999999998871 11235678887543
No 357
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.04 E-value=5.5e-10 Score=89.46 Aligned_cols=127 Identities=12% Similarity=0.089 Sum_probs=71.3
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-C
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-P 159 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P 159 (238)
..|.|.++..+|+|.|.|...+.. +. .-.+.. ...+. +......+|.+...+....+..|+.+.|.|.+.|. |
T Consensus 85 ~sL~I~~v~~~DsG~Y~C~~~~~~--~~-~~~~~~--~~~L~-V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P 158 (261)
T 2xqy_G 85 VYIQLSSLTSEDSAVYYCGRLGYV--YG-FDYWGQ--GTTLT-VSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFP 158 (261)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTT--SS-EEEECC--CEEEE-ECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBS
T ss_pred EEEEEcCCCcccCeEEEEEEecCC--Cc-ceEECC--CEEEE-EccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeC
Confidence 357788888888888887665521 10 000100 11111 11112245666543323345789999999999885 7
Q ss_pred CC-EEEEEeCCEEeeccCCccEEEecCCcEE--EEEeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 160 EP-RIEWYKDGSLVSAEIGSHRILLPAGSLF--FLSLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 160 ~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~--~~~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
.| .+.|++++..+......... . .+... ..+.|..+...| |.|+|.|.|.....
T Consensus 159 ~~i~v~W~k~g~~~~~~~~~~~~-~-~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 159 EPVTLTWNSGSLSSGVHTFPAVL-Q-SDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp SCCEEEEGGGTCCTTEEECCCEE-E-TTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred CCCEEEEecCCCcCceEecCcee-c-CCcEEEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 77 99999998765321111111 1 13222 122355666677 99999999976544
No 358
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.04 E-value=3.3e-09 Score=91.83 Aligned_cols=139 Identities=12% Similarity=0.116 Sum_probs=75.8
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE 160 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~ 160 (238)
.|.|.++.++|+|.|.|...+.. |.+...........+. +......+|.+...+. ..+.+|+.+.|.|.+.|. |.
T Consensus 81 ~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~~~~~~~~l~-V~~~~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~ 156 (475)
T 1iga_A 81 YMGLSSLRPEDTAVYYCARDPYG--GGKSEFDYWGQGTLVT-VSSASPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQ 156 (475)
T ss_pred EEEECCCChhhCEEEEEEEeccC--CCccceeeecCceEEE-eccCCCcCCeEEecCc-cccCCCCeEEEEEEEeeecCC
Confidence 57777888888888887665521 1100000000111111 1101123566654332 223689999999999987 65
Q ss_pred -C-EEEEEeCCEEeeccCCccEEE-ecCCcEEEE--EeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEE
Q psy18191 161 -P-RIEWYKDGSLVSAEIGSHRIL-LPAGSLFFL--SLVHGKKDTDSGVYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 161 -p-~i~W~~~g~~l~~~~~~~~~~-~~~~~l~~~--~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
| .+.|++++...... ...... ..++...+. ..|..+...|.|.|+|.|.|..|......+.|.|
T Consensus 157 ~p~~v~W~~~~~~~~~~-~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V 225 (475)
T 1iga_A 157 EPLSVTWSESGQGVTAR-NFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPV 225 (475)
T ss_pred CceEEEEcCCCcccceE-eCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEeccc
Confidence 5 99999988533211 001111 123333221 2245567789999999999999854323444433
No 359
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.03 E-value=2e-09 Score=75.57 Aligned_cols=91 Identities=14% Similarity=0.222 Sum_probs=61.3
Q ss_pred CCceEEeCCCcEEEEEEEee--eCCCEEEEEeCCEEeeccC-----------CccEEEecCCcEEEEEeecCCCCCCCeE
Q psy18191 138 PASAVVPRHEPTTLNCKADG--YPEPRIEWYKDGSLVSAEI-----------GSHRILLPAGSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g--~P~p~i~W~~~g~~l~~~~-----------~~~~~~~~~~~l~~~~vi~~v~~~d~G~ 204 (238)
+..+.+.+|+++.|.|...+ .+.+.+.|++++..+.... .++.....+..|. |.+++.+|+|.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~----I~~v~~~D~G~ 85 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLT----LQSLTVNDTGE 85 (117)
T ss_dssp SCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEE----ECSCCGGGCEE
T ss_pred cCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEE----EeeCChhhCEE
Confidence 45688999999999999876 3345799999875543210 1122222244554 66779999999
Q ss_pred EEEEEE-eCCCceeEEEEEEEEccCCCCCC
Q psy18191 205 YWCVAR-NELGFARSKNATLDVAGKISTAT 233 (238)
Q Consensus 205 Y~C~a~-N~~G~~~s~~~~L~V~~~~~~~~ 233 (238)
|.|.+. +..|... ..+.|.|..++.+..
T Consensus 86 Y~C~v~~~~~g~~~-~~~~L~V~~pp~~~~ 114 (117)
T 3q0h_A 86 YFCIYHTYPDGTYT-GRIFLEVLESSVAEH 114 (117)
T ss_dssp EEEEEEEETTCCEE-EEEEEEEECC-----
T ss_pred EEEEEEECCCCCeE-EEEEEEEEccCcccc
Confidence 999865 5668775 589999998876653
No 360
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.03 E-value=2.2e-09 Score=83.77 Aligned_cols=97 Identities=13% Similarity=0.252 Sum_probs=64.0
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--E---Eeecc-------CCccEE-EecCCcEEEEEeecC
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--S---LVSAE-------IGSHRI-LLPAGSLFFLSLVHG 196 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~---~l~~~-------~~~~~~-~~~~~~l~~~~vi~~ 196 (238)
..+.+...|..+.+.+|+++.|.|.+.+.|.+.+.|+++. . .+... ...+.. ....+...+ .|..
T Consensus 23 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L--~I~~ 100 (237)
T 3sob_L 23 ADIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTL--TISS 100 (237)
T ss_dssp -CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE--EESS
T ss_pred ccceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEE--EECC
Confidence 3455666677889999999999999999999999999842 1 11100 011111 112222222 3788
Q ss_pred CCCCCCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 197 KKDTDSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
++.+|+|.|.|.+.|..+......+.|.|...
T Consensus 101 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 132 (237)
T 3sob_L 101 LQPEDFATYYCQQSYTTPPTFGQGTKVEIKRT 132 (237)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred CChhhCeEEEEeeccCCceEEcCcEEEEEecC
Confidence 89999999999999987654334556777553
No 361
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.03 E-value=3.2e-10 Score=86.01 Aligned_cols=73 Identities=21% Similarity=0.293 Sum_probs=55.8
Q ss_pred EEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecC-CCCCCCeEEEEEEEeCCCceeEEE
Q psy18191 142 VVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHG-KKDTDSGVYWCVARNELGFARSKN 220 (238)
Q Consensus 142 ~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~-v~~~d~G~Y~C~a~N~~G~~~s~~ 220 (238)
....|+++.|.|.+.| |.+ +.|+|+|..+... .++.|. |.. +..+|+|.|+|.|.|..|... ..
T Consensus 10 v~~~G~~v~L~C~~~~-~~~-i~W~k~g~~l~~~--------~~~~L~----I~~~~~~~D~G~Y~C~a~n~~g~~~-~~ 74 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DEN-LKWEKNGQELPQK--------HDKHLV----LQDFSEVEDSGYYVCYTPASNKNTY-LY 74 (186)
T ss_dssp EEEETTEEEEECSSCC-CTT-CEEEETTEEECSC--------CCSEEE----EESCCTTTSCEEEEEECSSCCCCCC-EE
T ss_pred EEeCCcEEEEEEeCCC-CCc-eEEEECCEECCCC--------CCCEEE----ECCCCccccCEEEEEEEEeCCCcEE-EE
Confidence 3467999999999988 544 9999999988742 234454 555 699999999999999999864 46
Q ss_pred EEEEEccCC
Q psy18191 221 ATLDVAGKI 229 (238)
Q Consensus 221 ~~L~V~~~~ 229 (238)
+.+.|....
T Consensus 75 ~~~~v~~~~ 83 (186)
T 1jbj_A 75 LKARVGSAD 83 (186)
T ss_dssp ECCCCCSCC
T ss_pred EEEEEeccc
Confidence 666665443
No 362
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.02 E-value=6e-09 Score=69.77 Aligned_cols=86 Identities=20% Similarity=0.296 Sum_probs=65.8
Q ss_pred ceEEeCCCcEEEEEEEee-eCCCEEEEEeCC----EEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 140 SAVVPRHEPTTLNCKADG-YPEPRIEWYKDG----SLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g-~P~p~i~W~~~g----~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
..++..|+++.|.|.+.+ .+.|+++|-|-+ .+|... .......+....+.+-+..+...|+|.|.|.|.+..|
T Consensus 20 ~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~--~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg 97 (120)
T 2aw2_A 20 EHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDR--QTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSN 97 (120)
T ss_dssp EEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSS--CEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cceEecCCeEEEEccEEeccCCCceEEEecCCceEEECccc--cccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCC
Confidence 467889999999999988 699999998844 455431 1122233444444444788899999999999999999
Q ss_pred ceeEEEEEEEEcc
Q psy18191 215 FARSKNATLDVAG 227 (238)
Q Consensus 215 ~~~s~~~~L~V~~ 227 (238)
..+|+..+|.|.+
T Consensus 98 ~ieSHsvtI~Vt~ 110 (120)
T 2aw2_A 98 LIESHSTTLYVTD 110 (120)
T ss_dssp EEECCCEEEEEEC
T ss_pred cEEeeEEEEEEEe
Confidence 9999888888865
No 363
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.01 E-value=4.8e-10 Score=88.81 Aligned_cols=87 Identities=22% Similarity=0.383 Sum_probs=54.8
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeee-CCC-EEEEEeCCEEeeccCCccEEEecCCcEEEEEeec--CCCCCCCe
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGY-PEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVH--GKKDTDSG 203 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~--~v~~~d~G 203 (238)
+..+|.+...+.......|+.+.|.|.+.|. |.+ .+.|+++|..+............+|++.+...+. .....|.|
T Consensus 127 ~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~ 206 (240)
T 4acp_A 127 QPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGN 206 (240)
T ss_dssp CCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTC
T ss_pred CCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCC
Confidence 4567887765444333358999999999984 554 7999999988643111111223456655443321 11224689
Q ss_pred EEEEEEEeCCC
Q psy18191 204 VYWCVARNELG 214 (238)
Q Consensus 204 ~Y~C~a~N~~G 214 (238)
.|+|.+.+..-
T Consensus 207 ~ytC~V~h~~l 217 (240)
T 4acp_A 207 VFSCSVMHEAL 217 (240)
T ss_dssp CEEEEEECTTS
T ss_pred EEEEEEEECCC
Confidence 99999999764
No 364
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.01 E-value=1.1e-09 Score=86.19 Aligned_cols=130 Identities=14% Similarity=0.202 Sum_probs=72.8
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCccc-CCceEEeCCCCcceeccee-cCCccCCEEEe-CCCceEEeCCCcEEEEEEEee
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQK-GLPLKKYHPPSLPLFPGVH-GDGYRVPRITE-HPASAVVPRHEPTTLNCKADG 157 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~-G~y~c~~~~~~~~~~~~~~-~~v~~~P~i~~-~~~~~~~~~G~~~~L~C~~~g 157 (238)
..|.|.++..+|+|.|.|...+.... +.. .+. ....+.+.. .....+|.+.. .+....+..|+.+.|.|.+.|
T Consensus 72 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~--~~~--~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g 147 (238)
T 1bec_A 72 FSLILELATPSQTSVYFCASGGGRGSYAEQ--FFG--PGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARG 147 (238)
T ss_dssp EEEEESSCCGGGCEEEEEEEESCTTCGGGC--EEC--CCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEE
T ss_pred EEEEEecCCcccCEEEEEEEecCCCCcccc--ccC--CCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEee
Confidence 35777788888888888765542100 000 000 001111100 00124677654 344455678999999999998
Q ss_pred e-CCC-EEEEEeCCEEeeccCCc--cEEEecCCcEEEEEeecC--CCCCC-CeEEEEEEEeCCC
Q psy18191 158 Y-PEP-RIEWYKDGSLVSAEIGS--HRILLPAGSLFFLSLVHG--KKDTD-SGVYWCVARNELG 214 (238)
Q Consensus 158 ~-P~p-~i~W~~~g~~l~~~~~~--~~~~~~~~~l~~~~vi~~--v~~~d-~G~Y~C~a~N~~G 214 (238)
. |.| .+.|+++|..+...... ......++.+.+...+.. ....| .|.|+|.|.|...
T Consensus 148 ~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 148 FFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred EeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 6 655 89999999988642100 112234565554433221 12223 6789999999753
No 365
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.01 E-value=2e-09 Score=86.72 Aligned_cols=130 Identities=14% Similarity=0.124 Sum_probs=72.9
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee-cCCccCCEEEeC-CCceEEeCCCcEEEEEEEeeeC
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH-GDGYRVPRITEH-PASAVVPRHEPTTLNCKADGYP 159 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~-~~v~~~P~i~~~-~~~~~~~~G~~~~L~C~~~g~P 159 (238)
.|.|.++..+|+|.|.|...+....+.+.-.+. ....+.+.. .....+|.+... +....+.+|+.+.|.|.+.|.+
T Consensus 101 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~--~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~ 178 (279)
T 2wbj_D 101 TLTVTSAHPEDSSFYICSARDLTSGANNEQFFG--PGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFY 178 (279)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTCBTSCCEEEC--CCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEB
T ss_pred EEEEccCCccCCEEEEEEEcccccCCccceeeC--CCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEc
Confidence 577778888888888866554110000000000 011111100 011246777543 4444455799999999999874
Q ss_pred C--CEEEEEeCCEEeeccCCccEEE---------ecCCcEEEEE--eecCCCCCC-CeEEEEEEEeCCCce
Q psy18191 160 E--PRIEWYKDGSLVSAEIGSHRIL---------LPAGSLFFLS--LVHGKKDTD-SGVYWCVARNELGFA 216 (238)
Q Consensus 160 ~--p~i~W~~~g~~l~~~~~~~~~~---------~~~~~l~~~~--vi~~v~~~d-~G~Y~C~a~N~~G~~ 216 (238)
+ |.+.|+++|..+... .... ..++...+.. .|......| .|.|+|.|.|.....
T Consensus 179 P~~~~v~W~k~g~~l~~~---~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 179 PDHVELSWWVNGKEVHSG---VSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp SSCEEEEEEETTEECCTT---EEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred CCCcEEEEEECCEECCCC---cccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 3 699999999988642 1110 1344443322 244444444 678999999987654
No 366
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.01 E-value=1.2e-09 Score=83.67 Aligned_cols=91 Identities=23% Similarity=0.290 Sum_probs=64.6
Q ss_pred CCCceEEeCCCcEEEEEEEeeeC----CCEEEEEe----------------CCEEeec---cCCccEEEec------CCc
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYP----EPRIEWYK----------------DGSLVSA---EIGSHRILLP------AGS 187 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P----~p~i~W~~----------------~g~~l~~---~~~~~~~~~~------~~~ 187 (238)
.+..+.+.+|+++.|.|.+.+.| .+.+.|++ ++..+.. ....+..... +..
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34567889999999999998887 57999998 3333321 0011122211 234
Q ss_pred EEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 188 LFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 188 l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
|. |..++.+|+|.|+|.|.|..|... ..+.|.|..++..+
T Consensus 86 L~----i~~v~~~D~G~Y~C~~~~~~~~~~-~~~~l~V~~~p~~~ 125 (214)
T 3jz7_A 86 IN----VTNLQLSDIGTYQCKVKKAPGVAN-KKFLLTVLVKPSGT 125 (214)
T ss_dssp EE----ECSCCGGGCEEEEEEEEETTEEEE-EEEEEEEECCCBSC
T ss_pred EE----EccCChhhCeEEEEEEEeCCCccc-cEEEEEEEcCCCCc
Confidence 44 667799999999999999999885 59999998776544
No 367
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.00 E-value=1.1e-09 Score=83.92 Aligned_cols=79 Identities=14% Similarity=0.202 Sum_probs=57.7
Q ss_pred eCCCcEEEEEEEeee-CCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeEEEEE
Q psy18191 144 PRHEPTTLNCKADGY-PEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNAT 222 (238)
Q Consensus 144 ~~G~~~~L~C~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~ 222 (238)
-.++.+.|.|.+.+. |.|.+.|+++|..+... ....+...++...+ .|..++.+|+|.|+|.|.|..|... ..+.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~-~~~~~~~~~~~~~L--~i~~v~~~D~G~Y~C~~~n~~~~~~-~~~~ 90 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS-DRVKTGVTGEQIWL--QINEPTPNDKGKYVMELFDGKTGHQ-KTVD 90 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCC-SSEEEEEETTEEEE--EEESCCGGGCEEEEEEEECSSCEEE-EEEE
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCC-CeEEEEEeCCEEEE--EECCCCcccCEEEEEEEecCCcceE-EEEE
Confidence 357778889988875 58999999999988753 22333333333222 2677799999999999999999886 4777
Q ss_pred EEEc
Q psy18191 223 LDVA 226 (238)
Q Consensus 223 L~V~ 226 (238)
|.|.
T Consensus 91 l~v~ 94 (212)
T 2r15_A 91 LSGQ 94 (212)
T ss_dssp ECHH
T ss_pred EEEe
Confidence 7654
No 368
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.00 E-value=8.6e-09 Score=80.11 Aligned_cols=89 Identities=18% Similarity=0.233 Sum_probs=59.2
Q ss_pred CCceEEeCCCcEEEEEEEeeeCCC---EEEEEeCCEEee-----------ccC----CccEEEec----CCcEEEEEeec
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPEP---RIEWYKDGSLVS-----------AEI----GSHRILLP----AGSLFFLSLVH 195 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~p---~i~W~~~g~~l~-----------~~~----~~~~~~~~----~~~l~~~~vi~ 195 (238)
+..+.+.+|+++.|.|.+.+.|.+ .|.|+|++.... ... ..+..... .+...+ .|.
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L--~I~ 88 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAAL--RIH 88 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEE--EES
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEE--EEe
Confidence 345788999999999999877665 699998763221 100 01111111 122222 378
Q ss_pred CCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 196 GKKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.++.+|+|.|+|.|.|..|... ..+.+.+....
T Consensus 89 ~v~~~D~G~Y~C~a~n~~~~~~-~~v~~~~~~~~ 121 (226)
T 4f80_A 89 NVTASDSGKYLCYFQDGDFYEK-ALVELKVAALG 121 (226)
T ss_dssp SCCGGGCEEEEEEEEETTEEEE-EEEEEEEEBCC
T ss_pred eCchHHCeeEEEEEECCCcEEE-EEEEEeeccce
Confidence 8899999999999999998886 36666665544
No 369
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.99 E-value=2.6e-09 Score=84.58 Aligned_cols=97 Identities=15% Similarity=0.263 Sum_probs=63.8
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeC-----CCEEEEEeCC--EE---eec-------cCCccEEEe-cCCcEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYP-----EPRIEWYKDG--SL---VSA-------EIGSHRILL-PAGSLFFL 191 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P-----~p~i~W~~~g--~~---l~~-------~~~~~~~~~-~~~~l~~~ 191 (238)
..+.+...|..+.+.+|+++.|.|.+.+.| .+.+.|++++ .. +.. ....+.... .++...+
T Consensus 33 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L- 111 (252)
T 3bkj_L 33 SDVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTL- 111 (252)
T ss_dssp -CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE-
T ss_pred cccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEE-
Confidence 345566667788999999999999999888 6899999854 11 110 001111111 1222222
Q ss_pred EeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 192 SLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 192 ~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
.|..++.+|+|.|.|.|.|..+......+.|.|...
T Consensus 112 -~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 147 (252)
T 3bkj_L 112 -RISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRA 147 (252)
T ss_dssp -EESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCC
T ss_pred -EECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCC
Confidence 378889999999999999987654323456777653
No 370
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.99 E-value=1.7e-09 Score=75.23 Aligned_cols=87 Identities=22% Similarity=0.238 Sum_probs=57.5
Q ss_pred CCceEEeCCCcEEEEEEE-eeeCCCE----EEEEeCCEEee--c---------cCCccEEEec--------CCcEEEEEe
Q psy18191 138 PASAVVPRHEPTTLNCKA-DGYPEPR----IEWYKDGSLVS--A---------EIGSHRILLP--------AGSLFFLSL 193 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~-~g~P~p~----i~W~~~g~~l~--~---------~~~~~~~~~~--------~~~l~~~~v 193 (238)
|..+.+.+|+++.|.|.+ .+.+.+. +.|++++.... . ....+..... +..|.
T Consensus 7 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~---- 82 (118)
T 3udw_C 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR---- 82 (118)
T ss_dssp CSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEE----
T ss_pred CCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEE----
Confidence 345778999999999998 4555444 99999753210 0 0011111111 23444
Q ss_pred ecCCCCCCCeEEEEEEEe-CCCceeEEEEEEEEccCC
Q psy18191 194 VHGKKDTDSGVYWCVARN-ELGFARSKNATLDVAGKI 229 (238)
Q Consensus 194 i~~v~~~d~G~Y~C~a~N-~~G~~~s~~~~L~V~~~~ 229 (238)
|..++.+|+|.|.|.+.| ..|... ..+.|.|..+|
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~-~~~~L~V~~~P 118 (118)
T 3udw_C 83 MFGLRVEDEGNYTCLFVTFPQGSRS-VDIWLRVLAKP 118 (118)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEE-EEEEEEEEC--
T ss_pred EeecChHHCeEEEEEEEECCCCCcc-ceEEEEEEeCC
Confidence 677799999999999999 777775 58899997654
No 371
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.99 E-value=2.9e-10 Score=88.19 Aligned_cols=87 Identities=17% Similarity=0.256 Sum_probs=56.6
Q ss_pred CccCCEEEeC-CCceEEeCCCcEEEEEEEeee-CC-CEEEEEeCCEEeeccC--CccEEEe---cCCcEEEEEeecCCCC
Q psy18191 128 GYRVPRITEH-PASAVVPRHEPTTLNCKADGY-PE-PRIEWYKDGSLVSAEI--GSHRILL---PAGSLFFLSLVHGKKD 199 (238)
Q Consensus 128 v~~~P~i~~~-~~~~~~~~G~~~~L~C~~~g~-P~-p~i~W~~~g~~l~~~~--~~~~~~~---~~~~l~~~~vi~~v~~ 199 (238)
+..+|.+... +....+..|+.+.|.|.+.|. |. +.|.|+++|..+.... ....... .+|++.+...+. +..
T Consensus 103 ~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~-v~~ 181 (214)
T 1ow0_A 103 NTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILR-VAA 181 (214)
T ss_dssp SCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEE-EEH
T ss_pred CCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEE-ECH
Confidence 5578887543 333345678999999999996 43 4899999999886431 0111223 466665543321 133
Q ss_pred ---CCCeEEEEEEEeCCCc
Q psy18191 200 ---TDSGVYWCVARNELGF 215 (238)
Q Consensus 200 ---~d~G~Y~C~a~N~~G~ 215 (238)
.|.|.|+|.|.|..-.
T Consensus 182 ~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 182 EDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp HHHHHTCCEEEEEECTTCT
T ss_pred HHccCCCEEEEEEECCCCC
Confidence 3478999999998754
No 372
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.99 E-value=5.4e-10 Score=83.73 Aligned_cols=85 Identities=19% Similarity=0.159 Sum_probs=62.5
Q ss_pred ceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCC---------ccEEEe--cCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 140 SAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIG---------SHRILL--PAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~---------~~~~~~--~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
.+.+.+|++++|.|.+.+ |.+.|.|++++..+..... ..+..+ .+++|. |..++.+|+|.|.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~----I~~v~~~DsG~Y~C~ 78 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLT----IYNLTSSDEDEYEME 78 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEE----ECSCCGGGCEEEEEE
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEE----ECCCChhhCceEEEE
Confidence 466789999999999844 8899999998875432100 112222 456666 566699999999999
Q ss_pred EEeCCCceeEEEEEEEEccCCCCC
Q psy18191 209 ARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
|.|..| . ..+.|.|..+++.|
T Consensus 79 ~~n~~~--~-~~~~L~V~~~~~~p 99 (171)
T 1ccz_A 79 SPNITD--T-MKFFLYVLEMVSKP 99 (171)
T ss_dssp CTTCCS--C-EEEEEEEECCCCCC
T ss_pred EeCCCC--c-EEEEEEEECcCCCC
Confidence 999988 3 58899998776544
No 373
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.98 E-value=9e-10 Score=86.27 Aligned_cols=138 Identities=12% Similarity=0.146 Sum_probs=72.2
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCc---eEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLP---LKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY 158 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y---~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~ 158 (238)
.|.|.++.++|+|.|.|...+... +.| .-.+. ....+. +......+|.+...+....+..|+.+.|.|.+.|.
T Consensus 84 sL~I~~v~~~DsG~Y~C~~~~~~~-~~~~~~~~~~~--~~~~l~-V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~ 159 (232)
T 3qhz_H 84 VLTMTNMDPVDTATYYCARTLRVS-GDYVRDFDLWG--RGTLVT-VSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY 159 (232)
T ss_dssp EEEECSCCGGGCEEEEEEEECCC----CCCCCCEEC--CCEEEE-ECSSCCBCCEEEEECC-------CEEEEEEEEEEE
T ss_pred EEEECcCChhhCEEEEEEEeeccC-ccccccceeeC--CCeEEE-EecCCCCCCEEEEecccccccCCCcEEEEEEEeeE
Confidence 467777777788887766543210 000 00000 111111 11123457777644344455679999999999886
Q ss_pred CC--CEEEEEeCCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 159 PE--PRIEWYKDGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 159 P~--p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
++ ..+.|++++..+...... .....++...+ ...|......| |.|+|.|.|..+... ....|.+.
T Consensus 160 ~P~~~~v~W~~~g~~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~-~~~~l~~~ 228 (232)
T 3qhz_H 160 FPEPVTVSWNSGALTSGVHTFP-AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKRVEPK 228 (232)
T ss_dssp BSSCCEEEEGGGTBCTTEEECC-CEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEE-EEEECCCC
T ss_pred eCCCeEEEEEECCEecceeecc-ceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCcc-EEEEeCCC
Confidence 54 357899988643221111 11222343322 12244556678 999999999988775 36666553
No 374
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.98 E-value=3.2e-08 Score=86.62 Aligned_cols=96 Identities=19% Similarity=0.285 Sum_probs=59.4
Q ss_pred cCCEEEeCCCceEEeCCCcEE-EEEEEeeeCCC--EEEEEeCCEEeeccCCc--cEEEecCCc-EEEEEe--ecCCCCCC
Q psy18191 130 RVPRITEHPASAVVPRHEPTT-LNCKADGYPEP--RIEWYKDGSLVSAEIGS--HRILLPAGS-LFFLSL--VHGKKDTD 201 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~-L~C~~~g~P~p--~i~W~~~g~~l~~~~~~--~~~~~~~~~-l~~~~v--i~~v~~~d 201 (238)
.+|.+...+... .|+.+. |.|.+.|.+++ .+.|+|+|..+...... ......++. +.+... +.....+|
T Consensus 402 ~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~ 478 (512)
T 1zvo_C 402 VKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQ 478 (512)
T ss_pred CCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCC
Confidence 567765543322 789999 99999996554 58999999988643111 112233454 433222 33334556
Q ss_pred CeEEEEEEEeCCCce-eEEEEEEEEccC
Q psy18191 202 SGVYWCVARNELGFA-RSKNATLDVAGK 228 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~-~s~~~~L~V~~~ 228 (238)
.|.|+|.|.|..... ......|.|...
T Consensus 479 ~g~YtC~v~h~~l~~~~~~~~~~~v~~~ 506 (512)
T 1zvo_C 479 PATYTCVVSHEDSRTLLNASRSLEVSYV 506 (512)
T ss_pred CCeEEEEEEecCCCCceEEEEEEEeccC
Confidence 999999999987543 223556666543
No 375
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.98 E-value=4.6e-09 Score=81.10 Aligned_cols=91 Identities=21% Similarity=0.219 Sum_probs=62.1
Q ss_pred CCceEEeCCCcEEEEEEEeeeCC-----CEEEEEeCCEEeeccCC-------------ccEEEec----CCcEEEEEeec
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPE-----PRIEWYKDGSLVSAEIG-------------SHRILLP----AGSLFFLSLVH 195 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~-----p~i~W~~~g~~l~~~~~-------------~~~~~~~----~~~l~~~~vi~ 195 (238)
+..+.+.+|+++.|.|.+.|.|. +.+.|++++..+..... .+..... .+... +.|.
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~--L~I~ 85 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAA--LQIT 85 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEE--EEES
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEE--EEEc
Confidence 34567889999999999988774 48999998744422100 1111111 12222 2378
Q ss_pred CCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 196 GKKDTDSGVYWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
.++.+|+|.|+|.|.| .|... ..+.|.|..++..+
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~-~~~~l~V~~~~~~~ 120 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADY-KRITVKVNAPYNKI 120 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEE-EEEEEEEEBCCCCC
T ss_pred CcccccCeEEEEEEEe-CCCce-eEEEEEEECCCCCC
Confidence 8899999999999999 66664 58899998766544
No 376
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.98 E-value=5.9e-09 Score=72.00 Aligned_cols=79 Identities=16% Similarity=0.316 Sum_probs=53.4
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEEEeecCCC
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFLSLVHGKK 198 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~~vi~~v~ 198 (238)
+.+...|..+.+.+|+++.|.|.+.+.+.+.+.|+++. . .+... ...+.... ..+... +.|..++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~--L~I~~v~ 81 (109)
T 2q20_A 4 IQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFT--FTISSLQ 81 (109)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSCC
T ss_pred ccEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEE--EEECCCC
Confidence 34555567788999999999999988888899999853 1 12110 01111111 122222 2378889
Q ss_pred CCCCeEEEEEEEeC
Q psy18191 199 DTDSGVYWCVARNE 212 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~ 212 (238)
.+|+|.|.|.+.|.
T Consensus 82 ~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 82 PEDIATYYCQQYDN 95 (109)
T ss_dssp GGGCEEEEEEECSS
T ss_pred hhhCEEEEEEEeeC
Confidence 99999999999885
No 377
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.97 E-value=1.3e-09 Score=86.08 Aligned_cols=84 Identities=17% Similarity=0.239 Sum_probs=52.3
Q ss_pred CCceEEeCCCcEEEEEEEeee-CC-CEEEEEeCCE-EeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeC
Q psy18191 138 PASAVVPRHEPTTLNCKADGY-PE-PRIEWYKDGS-LVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~-P~-p~i~W~~~g~-~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
+....+.+|+.+.|.|.+.|. |. +.+.|++++. .+....... ....++.... ...|..+.. | |.|+|.|.|.
T Consensus 139 p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~-~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~ 215 (242)
T 1hxm_B 139 PSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGN-TMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHE 215 (242)
T ss_dssp CCGGGGGSSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECC-CEECSSSEEEEEEEEECTGGG-G-SCEEEEEEET
T ss_pred CChhhcccCCCceEEEEEeeEECCCeEEEEEcCCCEeecCccccc-eecCCCcEEEEEEEEEccccC-C-CEEEEEEEeC
Confidence 333445679999999999987 64 7899999986 553210011 1123343322 122443343 4 9999999999
Q ss_pred CCceeEEEEEEEE
Q psy18191 213 LGFARSKNATLDV 225 (238)
Q Consensus 213 ~G~~~s~~~~L~V 225 (238)
.+... ....|.+
T Consensus 216 ~~~~~-~~~~~~~ 227 (242)
T 1hxm_B 216 NNKNG-VDQEIIF 227 (242)
T ss_dssp TSGGG-SCEEEEE
T ss_pred CCCCC-ceeEeec
Confidence 98874 2555555
No 378
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.97 E-value=4.6e-09 Score=82.86 Aligned_cols=95 Identities=16% Similarity=0.254 Sum_probs=63.1
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC-----EEeecc-------CCccEEE-ecCCcEEEEEeecCCC
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG-----SLVSAE-------IGSHRIL-LPAGSLFFLSLVHGKK 198 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g-----~~l~~~-------~~~~~~~-~~~~~l~~~~vi~~v~ 198 (238)
+.+...|..+.+.+|+++.|.|.+.+.|.|.+.|+++. ..+... ...+... ...+... +.|..+.
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v~ 82 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYS--LTISNLE 82 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSCC
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEE--EEEccCC
Confidence 34566677788999999999999999999999999853 111110 0111111 1122212 2378889
Q ss_pred CCCCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 199 DTDSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
.+|+|.|.|.|.|..+........|.|...
T Consensus 83 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 112 (250)
T 3esu_F 83 QEDIGTYFCQQGNTLPWTFGGGTKLEIRRG 112 (250)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred hhhCEEEEEEEeeCCCceECCCEEEEEECC
Confidence 999999999999987765434567777653
No 379
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.95 E-value=3.3e-09 Score=84.79 Aligned_cols=99 Identities=19% Similarity=0.201 Sum_probs=65.1
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEE-EecCCcEEEEEeecCCCCCCCeEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRI-LLPAGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~-~~~~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
...+|.|...|. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+... ... ........-...|..++.+|+|.|+
T Consensus 4 ~~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~---~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 78 (257)
T 1b6u_A 4 VHRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTL---HLIGEHHDGVSKANFSIGPMMQDLAGTYR 78 (257)
T ss_dssp -CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEE---EEECBCCTTCEEEEEEECSCCTTTCEEEE
T ss_pred cCCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcc---eeeeeccCCCceEEEEeecCCcccCEEEE
Confidence 346788877765 67899999999999975 56899999998654321 000 0011111112236778999999999
Q ss_pred EEEEeCCC----ceeEEEEEEEEccCCCC
Q psy18191 207 CVARNELG----FARSKNATLDVAGKIST 231 (238)
Q Consensus 207 C~a~N~~G----~~~s~~~~L~V~~~~~~ 231 (238)
|.|.|..+ ...+..+.|.|.+.+.+
T Consensus 79 C~a~~~~~~~~~s~~S~~~~L~V~~~~~~ 107 (257)
T 1b6u_A 79 CYGSVTHSPYQLSAPSDPLDIVITGLYEK 107 (257)
T ss_dssp EEEECSSCTTSCCCCCCCEEEEEECSSCC
T ss_pred EeEeccCCCccccccCCCEEEecccCCCC
Confidence 99987532 23345788888765433
No 380
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.95 E-value=5e-09 Score=80.54 Aligned_cols=91 Identities=16% Similarity=0.319 Sum_probs=60.3
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeC---CCEEEEEeCC--EEee---c-------cCCccEE-EecCCcEEEEEeecCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYP---EPRIEWYKDG--SLVS---A-------EIGSHRI-LLPAGSLFFLSLVHGK 197 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P---~p~i~W~~~g--~~l~---~-------~~~~~~~-~~~~~~l~~~~vi~~v 197 (238)
+.. |..+.+.+|+++.|.|.+.|.| .|.+.|++++ ..+. . ....+.. ....+... +.|..+
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v 80 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAA--LTITGA 80 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSC
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEE--EEECCC
Confidence 444 6778899999999999999887 4789999852 2221 0 0011211 11222222 237888
Q ss_pred CCCCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 198 KDTDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
+.+|+|.|.|.|.|..|......+.|.|..
T Consensus 81 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 110 (212)
T 1q0x_L 81 QTEDEAIYFCALWSNNKLVFGGGTKLTVLG 110 (212)
T ss_dssp CGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred CccCCEEEEEEEecCchhhcCCCeEEEEec
Confidence 999999999999998875433355677753
No 381
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.95 E-value=2.1e-09 Score=81.46 Aligned_cols=77 Identities=17% Similarity=0.321 Sum_probs=60.0
Q ss_pred CCCceEEeCCCcEEEEEE-EeeeCC-CEEEEEeCCEEeeccCCccEEE-ecCCcEEEEEeecCCCCCCCeEEEEEEEeCC
Q psy18191 137 HPASAVVPRHEPTTLNCK-ADGYPE-PRIEWYKDGSLVSAEIGSHRIL-LPAGSLFFLSLVHGKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~-~~g~P~-p~i~W~~~g~~l~~~~~~~~~~-~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~ 213 (238)
.+..+.+.+|+.+.|.|. +.+.|. +.+.|++++..+.......... ..++.|. |..++.+|+|.|+|.+.|..
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~~~~~~ 89 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLY----IANVEASDKGNYSCFVSSPS 89 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEE----ESSCCGGGCEEEEEEEEEGG
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEE----ECcCCcccCeEEEEEEEecC
Confidence 356788999999999999 899999 9999999998775332333333 3456665 56669999999999999987
Q ss_pred Ccee
Q psy18191 214 GFAR 217 (238)
Q Consensus 214 G~~~ 217 (238)
+...
T Consensus 90 ~~~~ 93 (201)
T 3s97_C 90 ITKS 93 (201)
T ss_dssp GTEE
T ss_pred CCcc
Confidence 6653
No 382
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.95 E-value=5.4e-09 Score=82.38 Aligned_cols=95 Identities=19% Similarity=0.302 Sum_probs=61.8
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEEEeecCCCC
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFLSLVHGKKD 199 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~~vi~~v~~ 199 (238)
.+...|..+.+.+|+++.|.|.+.+.|.|.+.|+++. . .+... ...+.... .++... +.|..++.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v~~ 80 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFT--LSINSVET 80 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE--EEESSCCG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEE--EEECCCCh
Confidence 3555677889999999999999999999999999853 1 11110 01111111 122222 23788899
Q ss_pred CCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 200 TDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 200 ~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
+|+|.|.|.|.|..+...+..+.|.|..++
T Consensus 81 ~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~ 110 (242)
T 2znx_A 81 EDFGMYFCQQSNSXPYTFGGGTKLEITGGG 110 (242)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC---
T ss_pred HHCEEEEEeEecCCceEECCCEEEEEcCCC
Confidence 999999999999866432235677876654
No 383
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.94 E-value=2.5e-09 Score=85.48 Aligned_cols=131 Identities=14% Similarity=0.163 Sum_probs=58.9
Q ss_pred EEEcCCCCCCCCCceEEEeCCCccc------CCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEE
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQK------GLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKA 155 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~------G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~ 155 (238)
.|.|.++..+|+|.|.|...+.... +........ ....+. +......+|.+...+....+..|+.+.|.|.+
T Consensus 80 sL~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~-~~t~L~-V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~ 157 (257)
T 3bn9_D 80 YLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWG-QGTMVT-VSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 157 (257)
T ss_dssp EEEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEEC-CCEEEE-ECSSCCBCCEECCCCC-----------CCCEE
T ss_pred EEEECCCChhhCEEEEEEEecCCCcccccccccceeeeeC-CcEEEE-ecCCCCcCCcEEEecCcccccCCCcEEEEEEE
Confidence 5677777778888887665542100 000000000 001111 11111245776544333345789999999999
Q ss_pred eee-CCC-EEEEEeCCEEeeccCCccEEEecCCcEEEE--EeecCCCCCCCeEEEEEEEeCCCce
Q psy18191 156 DGY-PEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFL--SLVHGKKDTDSGVYWCVARNELGFA 216 (238)
Q Consensus 156 ~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~--~vi~~v~~~d~G~Y~C~a~N~~G~~ 216 (238)
.|. |.| .+.|++++..+...... .....++...+. ..|..+...| |.|+|.|.|.....
T Consensus 158 ~g~~P~pi~v~W~k~g~~~~~~~~~-~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 158 KDYFPEPVTVSWNSGALTSGVHTFP-AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp EEEBSSCCEEEETTTTCCSSCEECC-CEECTTSCEEEEEECCCC--------CEEEEEEEGGGTE
T ss_pred eeEECCCcEEEEeeCCCcCCcEecC-CeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 986 877 99999998764321011 112234443332 2244445567 99999999966443
No 384
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.94 E-value=1.2e-09 Score=84.88 Aligned_cols=91 Identities=24% Similarity=0.372 Sum_probs=65.5
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCC-CEEEEEeCCEE-----eec---cCC--ccEE-----------EecCCcEEEEEee
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPE-PRIEWYKDGSL-----VSA---EIG--SHRI-----------LLPAGSLFFLSLV 194 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~-p~i~W~~~g~~-----l~~---~~~--~~~~-----------~~~~~~l~~~~vi 194 (238)
.|.++.+.+|+++.|.|.+.+.|. +.+.|++++.. +.. ... ..+. ...++.|. |
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~----i 81 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLV----L 81 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEE----E
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEE----E
Confidence 356788899999999999999985 89999975432 110 000 1122 23345544 6
Q ss_pred cCCCCCCCeEEEEEEEeCC-CceeEEEEEEEEccCCCCC
Q psy18191 195 HGKKDTDSGVYWCVARNEL-GFARSKNATLDVAGKISTA 232 (238)
Q Consensus 195 ~~v~~~d~G~Y~C~a~N~~-G~~~s~~~~L~V~~~~~~~ 232 (238)
..++.+|+|.|+|.|.|.. |... ..+.|.|..++..+
T Consensus 82 ~~v~~~D~G~Y~C~~~~~~~~~~~-~~~~l~V~~~p~~~ 119 (231)
T 2pet_A 82 AEAQVGDERDYVCVVRAGAAGTAE-ATARLNVFAKPEAT 119 (231)
T ss_dssp SSCCGGGCEEEEEEEECGGGCEEE-EEEEEEEEBCCCCC
T ss_pred cccCcccCceEEEEEEecCCCceE-EEEEEEEEecCCCc
Confidence 7779999999999999998 7665 68999998776543
No 385
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.93 E-value=2.9e-09 Score=84.54 Aligned_cols=127 Identities=14% Similarity=0.139 Sum_probs=71.1
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceeccee-cCCccCCEEEeC-CCceEEeCCCcEEEEEEEeee-
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVH-GDGYRVPRITEH-PASAVVPRHEPTTLNCKADGY- 158 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~-~~v~~~P~i~~~-~~~~~~~~G~~~~L~C~~~g~- 158 (238)
.|.|.++..+|+|.|.|...+... . .. .+. ....+.+.. .....+|.+... +....+.+|+.+.|.|.+.|.
T Consensus 77 ~L~I~~v~~~D~G~Y~C~~~~~~~-~-~~-~~~--~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~ 151 (252)
T 1oga_E 77 PLTVTSAQKNPTAFYLCASSSRSS-Y-EQ-YFG--PGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFY 151 (252)
T ss_dssp CEEECSCCSCCCEEEEEEEESSTT-S-CC-EEC--CCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEB
T ss_pred EEEECcCChhhCEEEEEEEecCCc-c-ce-eEC--CCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEc
Confidence 466677777777777765544200 0 00 000 001111100 112357777653 444445579999999999986
Q ss_pred CCC-EEEEEeCCEEeeccCCccEEE---------ecCCcEEEEEe--ecCCCC-CCCeEEEEEEEeCCCce
Q psy18191 159 PEP-RIEWYKDGSLVSAEIGSHRIL---------LPAGSLFFLSL--VHGKKD-TDSGVYWCVARNELGFA 216 (238)
Q Consensus 159 P~p-~i~W~~~g~~l~~~~~~~~~~---------~~~~~l~~~~v--i~~v~~-~d~G~Y~C~a~N~~G~~ 216 (238)
|.+ .+.|+++|..+... .... ..++.+.+... |..... .|.|.|+|.+.|.....
T Consensus 152 P~~~~v~W~~~g~~l~~~---~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 219 (252)
T 1oga_E 152 PDHVELSWWVNGKEVHSG---VSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 219 (252)
T ss_dssp SSCEEEEEEETTEEECSS---EEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred CCCcEEEEEECCEECCCC---cccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 654 89999999988642 1110 13444433221 222232 25789999999987554
No 386
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.93 E-value=9.7e-09 Score=72.22 Aligned_cols=78 Identities=21% Similarity=0.344 Sum_probs=52.9
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC-----EEeecc-------CCccEEE-ecCCcEEEEEeecCCCC
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG-----SLVSAE-------IGSHRIL-LPAGSLFFLSLVHGKKD 199 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g-----~~l~~~-------~~~~~~~-~~~~~l~~~~vi~~v~~ 199 (238)
.+...|..+.+.+|++++|.|.+.+.+.+.+.|++.. ..+... ...+... ...+... +.|..++.
T Consensus 5 ~v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~--L~I~~v~~ 82 (119)
T 2e27_L 5 QMTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYS--FSISNLEP 82 (119)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE--EEECSCCG
T ss_pred eeEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEE--EEECCCCh
Confidence 4555567788999999999999998888899999852 112111 0111111 1122222 23788899
Q ss_pred CCCeEEEEEEEeC
Q psy18191 200 TDSGVYWCVARNE 212 (238)
Q Consensus 200 ~d~G~Y~C~a~N~ 212 (238)
+|+|.|.|.+.|.
T Consensus 83 ~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 83 EDAATYYCLQYDN 95 (119)
T ss_dssp GGCEEEEEEECGG
T ss_pred HHCEEEEEEEccC
Confidence 9999999999985
No 387
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.92 E-value=1.4e-09 Score=85.80 Aligned_cols=139 Identities=13% Similarity=0.191 Sum_probs=76.7
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcc---cCCce----EEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEE
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQ---KGLPL----KKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNC 153 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~---~G~y~----c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C 153 (238)
..|.|.++..+|+|.|.|...+... .+.+. -.+. ....+. +......+|.+...+....+..|+.+.|.|
T Consensus 86 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~--~~t~l~-V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C 162 (239)
T 3tv3_H 86 VFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWG--RGTLVT-VSSASTKGPSVFPLAPSSKSTSGGTAALGC 162 (239)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEEC--CCEEEE-ECCCCCBCCEEEEECCCCCC--TTEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEecCccccccccccccceeeeC--CCcEEe-eccCCCcCCEEEEECCChhhccCCcEEEEE
Confidence 3577888888888888876543210 00000 0111 111111 111234567776444444455799999999
Q ss_pred EEeee-CCC-EEEEEeCCEEeeccCCccEEEecCCcEEEE--EeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEE
Q psy18191 154 KADGY-PEP-RIEWYKDGSLVSAEIGSHRILLPAGSLFFL--SLVHGKKDTDSGVYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 154 ~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~--~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
.+.|. |.+ .+.|++++..+...... .....++...+. ..|......| |.|+|.+.|..+... ....|.+
T Consensus 163 ~~~~~~p~~~~v~W~~~g~~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~-~~~~l~~ 235 (239)
T 3tv3_H 163 LVKDYFPEPVTVSWNSGALTSGVHTFP-AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKRVEP 235 (239)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECC-CEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEE-EEEECCC
T ss_pred EEeeEeCCCeEEEEEECCccCceEecC-ceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCce-EEEEecc
Confidence 99884 544 48899988643221111 112234433321 2245556677 999999999987764 3555554
No 388
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.92 E-value=2.3e-09 Score=81.74 Aligned_cols=89 Identities=24% Similarity=0.343 Sum_probs=62.8
Q ss_pred ceEEeCCCcEEEEEEEe----eeCCCEEEEEeCCEEeeccCC----------ccEEE-e-cCCcEEEEEeecCCCCCCCe
Q psy18191 140 SAVVPRHEPTTLNCKAD----GYPEPRIEWYKDGSLVSAEIG----------SHRIL-L-PAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~----g~P~p~i~W~~~g~~l~~~~~----------~~~~~-~-~~~~l~~~~vi~~v~~~d~G 203 (238)
.+.+.+|+++.|.|.+. +.|.+.+.|++++..+..... .+... . .+..|. |..++.+|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~----I~~v~~~D~G 78 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIV----ILALRPSDEG 78 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEE----ECSCCGGGCE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEE----EecccchhCe
Confidence 46788999999999984 557899999999987631100 11111 1 223454 6677999999
Q ss_pred EEEEEEEeCCCcee----EEEEEEEEccCCCCC
Q psy18191 204 VYWCVARNELGFAR----SKNATLDVAGKISTA 232 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~----s~~~~L~V~~~~~~~ 232 (238)
.|.|.|.|..|... ...+.|.|..++..|
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p 111 (201)
T 1dr9_A 79 TYECVVLKYEKDAFKREHLAEVTLSVKADFPTP 111 (201)
T ss_dssp EEEEEEEECCTTSCEEEEEEEEEEEEECCCCCC
T ss_pred EEEEEEEcCCCCccccccccEEEEEEcCCCCCC
Confidence 99999999887653 247788887765443
No 389
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.92 E-value=6.6e-09 Score=81.38 Aligned_cols=94 Identities=19% Similarity=0.309 Sum_probs=63.2
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeC----CCEEEEEeCC--EE---eecc-------CCccEEEe-cCCcEEEEEeecC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYP----EPRIEWYKDG--SL---VSAE-------IGSHRILL-PAGSLFFLSLVHG 196 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P----~p~i~W~~~g--~~---l~~~-------~~~~~~~~-~~~~l~~~~vi~~ 196 (238)
+...|..+.+.+|+++.|.|.+.+.| .|.+.|+++. .. +... ...+.... .++... +.|..
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~ 81 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFT--LIIDP 81 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEESS
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEE--EEEcC
Confidence 45567778899999999999999988 7889999852 21 1110 01111111 122222 23788
Q ss_pred CCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 197 KKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
++.+|+|.|.|.|.|..+...+..+.|.|...+
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~ 114 (240)
T 1moe_A 82 VEADDVATYYCQQTNEDPYTFGGGTKLEIKGGG 114 (240)
T ss_dssp CCGGGCEEEEEEECSSSSCCBCCCEEEEECCCS
T ss_pred CChhhCEEEEEEEccCCceeecCCEEEEEecCC
Confidence 899999999999999877633346678887654
No 390
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.91 E-value=5.8e-09 Score=71.89 Aligned_cols=79 Identities=22% Similarity=0.308 Sum_probs=52.6
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC-----EEeecc------CCccEEEec-CCcEEEEEeecCCCCCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG-----SLVSAE------IGSHRILLP-AGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g-----~~l~~~------~~~~~~~~~-~~~l~~~~vi~~v~~~d 201 (238)
+...|..+.+.+|+++.|.|.+.+.+.+.+.|++.. ..+... ....++... .+. ...+.|..++.+|
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~D 82 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSAT-DFTLTISSVQAED 82 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSS-EEEEEESSCCTTC
T ss_pred EEEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCC-EEEEEECCCChhh
Confidence 344566788999999999999988888899999853 122111 001122221 221 1223378889999
Q ss_pred CeEEEEEEEeCC
Q psy18191 202 SGVYWCVARNEL 213 (238)
Q Consensus 202 ~G~Y~C~a~N~~ 213 (238)
+|.|.|.+.|..
T Consensus 83 sG~Y~C~~~~~~ 94 (108)
T 1qfw_M 83 FADYHCGQTYNH 94 (108)
T ss_dssp CSEEEEEECSSS
T ss_pred CEEEEEEEccCC
Confidence 999999999853
No 391
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.90 E-value=1.2e-08 Score=70.85 Aligned_cols=79 Identities=14% Similarity=0.297 Sum_probs=51.3
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--EE---eec-----cCCccEEEecCC--cEEEEEeecCCCCCCC
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--SL---VSA-----EIGSHRILLPAG--SLFFLSLVHGKKDTDS 202 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~~---l~~-----~~~~~~~~~~~~--~l~~~~vi~~v~~~d~ 202 (238)
...|..+.+.+|+++.|.|.+.+.+ +.+.|+++. .. +.. ....+.....+. .....+.|..++.+|+
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~Ds 83 (113)
T 1h5b_A 5 EQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDS 83 (113)
T ss_dssp EEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGC
T ss_pred EECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhC
Confidence 3446678899999999999998765 789999853 11 110 001112222111 1112233788899999
Q ss_pred eEEEEEEEeCCC
Q psy18191 203 GVYWCVARNELG 214 (238)
Q Consensus 203 G~Y~C~a~N~~G 214 (238)
|.|.|.+.|..|
T Consensus 84 G~Y~C~~~n~~~ 95 (113)
T 1h5b_A 84 GTYFCAAEASSG 95 (113)
T ss_dssp EEEEEEEECSSS
T ss_pred EEEEEEEecCCC
Confidence 999999999876
No 392
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.90 E-value=5.2e-09 Score=84.15 Aligned_cols=97 Identities=14% Similarity=0.236 Sum_probs=63.1
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCE-----Eeecc-------CCccEEEe-cCCcEEEEEeecCC
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGS-----LVSAE-------IGSHRILL-PAGSLFFLSLVHGK 197 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~-----~l~~~-------~~~~~~~~-~~~~l~~~~vi~~v 197 (238)
.+.+...|..+.+.+|+++.|.|.+.+.|.|.+.|++++. .+... ...+.... .++... +.|..+
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v 89 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFT--LTISSL 89 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSC
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEE--EEEccC
Confidence 4556667788899999999999999999999999998541 22110 01111111 122222 237888
Q ss_pred CCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 198 KDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
+.+|+|.|.|.|.|..+...+..+.|.|...+
T Consensus 90 ~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~ 121 (276)
T 3auv_A 90 QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGG 121 (276)
T ss_dssp CGGGCEEEEEEECSSSSCCCCCCEEEEC----
T ss_pred ChhhCEEEEEEEecCCcccccCCEEEEEecCC
Confidence 99999999999999876532234567776543
No 393
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.90 E-value=1.5e-08 Score=70.29 Aligned_cols=78 Identities=23% Similarity=0.354 Sum_probs=51.7
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeee--CCCEEEEEeC--CE---EeeccCCccEE-EecCCcEEEEEeecCCCCCCCeEE
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGY--PEPRIEWYKD--GS---LVSAEIGSHRI-LLPAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~--g~---~l~~~~~~~~~-~~~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
+...|..+.+.+|+++.|.|.+.+. |.+.+.|+++ +. .+... ..+.. ....+.....+.|..++.+|+|.|
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 81 (111)
T 2ywz_A 3 VDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISI-GGRYDETVDKGSKSFSLRISDLRVEDSGTY 81 (111)
T ss_dssp EEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCS-BTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred eEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEe-CCCEEEEEeCCCCEEEEEECCCChhcCEEE
Confidence 4455677889999999999999876 5789999985 22 12111 12221 111111122233788899999999
Q ss_pred EEEEEeC
Q psy18191 206 WCVARNE 212 (238)
Q Consensus 206 ~C~a~N~ 212 (238)
.|.+.|.
T Consensus 82 ~C~~~~~ 88 (111)
T 2ywz_A 82 KCQADYS 88 (111)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999993
No 394
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.90 E-value=1.1e-08 Score=70.40 Aligned_cols=78 Identities=21% Similarity=0.406 Sum_probs=52.2
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEEEeecCCCCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~~vi~~v~~~ 200 (238)
+...|..+.+.+|++++|.|.+.+.+.+.+.|++.. . .+... ...+.... ..+... +.|..++.+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v~~~ 81 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFV--FTIENTLSE 81 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE--EEESSCCGG
T ss_pred eEeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEE--EEECCCCHH
Confidence 344566788899999999999988888899999853 1 12110 01111111 222222 237888999
Q ss_pred CCeEEEEEEEeCC
Q psy18191 201 DSGVYWCVARNEL 213 (238)
Q Consensus 201 d~G~Y~C~a~N~~ 213 (238)
|+|.|.|.+.|..
T Consensus 82 DsG~Y~C~~~~~~ 94 (107)
T 1i8k_A 82 DVGDYYCLQSFNV 94 (107)
T ss_dssp GCEEEEEEECSSS
T ss_pred HCEEEEEEEeeCC
Confidence 9999999998853
No 395
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.89 E-value=1.4e-09 Score=84.01 Aligned_cols=83 Identities=10% Similarity=0.088 Sum_probs=56.8
Q ss_pred CCceEEeCC--CcEEEEEEEeeeCCCEEEEEeC---CEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 138 PASAVVPRH--EPTTLNCKADGYPEPRIEWYKD---GSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 138 ~~~~~~~~G--~~~~L~C~~~g~P~p~i~W~~~---g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
|..+.+.+| +++.|.|.+.+ |.|.+.|+++ +..+... ........+.|. |..++.+|+|.|+|.|.|.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~--~~~~~~~~~~l~----I~~v~~~D~G~Y~C~a~n~ 86 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG--NRISWDSKKGFT----IPSYMISYAGMVFCEAKIN 86 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCS--SSCEEETTTEEE----EEGGGTTTCSEEEEEEC--
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCC--CcccccCCccEE----EccCChhcCceEEEEEEEC
Confidence 467888999 99999999976 7799999884 6555432 222223445565 4555999999999999996
Q ss_pred CCceeEEEEEEEEcc
Q psy18191 213 LGFARSKNATLDVAG 227 (238)
Q Consensus 213 ~G~~~s~~~~L~V~~ 227 (238)
.+...+..+.|.|..
T Consensus 87 ~~~~~s~~~~l~v~~ 101 (213)
T 2x1w_L 87 DESYQSIMYIVVVVG 101 (213)
T ss_dssp --CEECCCEEEEECB
T ss_pred CeeEEEEEEEEEEeC
Confidence 665544347777744
No 396
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.89 E-value=4.9e-09 Score=80.89 Aligned_cols=146 Identities=18% Similarity=0.171 Sum_probs=86.1
Q ss_pred CCCccEEEeccccccccce-----------EEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCc
Q psy18191 61 YPKPICLRFQDLLPQSKQG-----------LMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGY 129 (238)
Q Consensus 61 ~~~~~~~w~~~~~~~~~~g-----------~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~ 129 (238)
.|.+.+.|++++..+.... ...|.+.++...|.|.|+|.+.|... ..... .........
T Consensus 45 ~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g--~~~~~--------~~l~v~~~P 114 (215)
T 3mtr_A 45 YPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIG--QESLE--------FILVQADTP 114 (215)
T ss_dssp ESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSC--EEEEE--------EEEEECCCC
T ss_pred cCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCC--ceEEE--------EEEEECCCC
Confidence 4567899999988554331 34678889999999999988877533 11111 111111122
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEE----eeeCCC--EEEEEeCCEEeeccCCccEEEec----CCcEEEEEeecCCCC
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKA----DGYPEP--RIEWYKDGSLVSAEIGSHRILLP----AGSLFFLSLVHGKKD 199 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~----~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~----~~~l~~~~vi~~v~~ 199 (238)
.+|.... . ...+..+.|.|.. .|.|.+ .+.|.+++..... ....... ...+. |..+..
T Consensus 115 ~~p~~~~----~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~---~~~~~~~~~~~~~~l~----i~~L~~ 182 (215)
T 3mtr_A 115 SSPSIDQ----V-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWH---SKWYDAKEASMEGIVT----IVGLKP 182 (215)
T ss_dssp CCCEEEE----E-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCE---EEEEEHHHHHHHTEEE----EECCCT
T ss_pred CCCcceE----E-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCccc---ccccccccccccccEE----ECCCCC
Confidence 2333221 1 2345678888863 233444 3778887643211 0111111 14455 455599
Q ss_pred CCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 200 TDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 200 ~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.|.|.|.|.|.|.+|.... +..+.|..++
T Consensus 183 ~~~y~~~~~A~N~~G~s~~-S~~~~v~T~p 211 (215)
T 3mtr_A 183 ETTYAVRLAALNGKGLGEI-SAASEFKTQP 211 (215)
T ss_dssp TCEEEEEEEEEESSCBCCC-CCCEEEECCC
T ss_pred CCEEEEEEEEEeCCcccCc-ccceeeEecc
Confidence 9999999999999999863 5666665543
No 397
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.88 E-value=9.7e-09 Score=72.88 Aligned_cols=83 Identities=23% Similarity=0.319 Sum_probs=56.1
Q ss_pred CCceEEeCCCcEEEEEEEeeeCC---CEEEEEeCCEE-----------eeccC----CccEEEecC----C--cEEEEEe
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPE---PRIEWYKDGSL-----------VSAEI----GSHRILLPA----G--SLFFLSL 193 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~---p~i~W~~~g~~-----------l~~~~----~~~~~~~~~----~--~l~~~~v 193 (238)
+..+....|+++.|.|.....+. ..+.|+|++.. ..... ..+.....+ + +|.
T Consensus 12 ~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~---- 87 (125)
T 4gos_A 12 TVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLR---- 87 (125)
T ss_dssp EECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEE----
T ss_pred CceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEE----
Confidence 34577789999999999854433 36999986421 11000 111111111 1 343
Q ss_pred ecCCCCCCCeEEEEEEEeCCCceeEEEEEEEE
Q psy18191 194 VHGKKDTDSGVYWCVARNELGFARSKNATLDV 225 (238)
Q Consensus 194 i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V 225 (238)
|.+++.+|+|.|.|.+.|..|..+ ..+.|.|
T Consensus 88 I~~v~~~D~G~Y~C~v~~~~g~~~-~~v~LkV 118 (125)
T 4gos_A 88 LKNVQLTDAGTYKCYIITSKGKGN-ANLEYKT 118 (125)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEE-EEEEEEE
T ss_pred ECCCChHHCEEEEEEEEeCCCeEE-EEEEEEE
Confidence 778899999999999999999997 5999987
No 398
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.88 E-value=5.5e-09 Score=74.67 Aligned_cols=90 Identities=24% Similarity=0.360 Sum_probs=60.2
Q ss_pred EEeCCCceEEeCCCcEEEEEEEee---eCCCEEEEEeCCEE-----eec------------c---------CC-ccEEEe
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADG---YPEPRIEWYKDGSL-----VSA------------E---------IG-SHRILL 183 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g---~P~p~i~W~~~g~~-----l~~------------~---------~~-~~~~~~ 183 (238)
+...+..+.+.+|+++.|.|.+.+ .+.+.+.|++++.. +.. . .. ..+..+
T Consensus 7 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 86 (135)
T 1xt5_A 7 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 86 (135)
T ss_dssp EECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEE
T ss_pred EeCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEE
Confidence 344556788999999999999753 67889999986432 110 0 00 012222
Q ss_pred c---CCcEEEEEeecCCCCCCCeEEEEEEEeC-----CCceeEEEEEEEEccC
Q psy18191 184 P---AGSLFFLSLVHGKKDTDSGVYWCVARNE-----LGFARSKNATLDVAGK 228 (238)
Q Consensus 184 ~---~~~l~~~~vi~~v~~~d~G~Y~C~a~N~-----~G~~~s~~~~L~V~~~ 228 (238)
. ...|. |..++.+|+|.|.|.+.|. +|... ..+.|.|.+.
T Consensus 87 ~~~~~~sL~----I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~-~~~~L~V~g~ 134 (135)
T 1xt5_A 87 ANLAAPTLR----LTHVHPQDGGRYWCQVAQWSIRTEFGLDA-KSVVLKVTGH 134 (135)
T ss_dssp SCTTSCCEE----ECSCCGGGCEEEEEEEECSSCCSGGGEEE-EEEEEEEETT
T ss_pred ecCCCCeEE----ECCCChhhCcEEEEEEEcCCccccccccc-eeEEEEEecC
Confidence 1 13344 6777999999999999995 45554 5888988764
No 399
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.88 E-value=1.5e-08 Score=79.75 Aligned_cols=89 Identities=18% Similarity=0.252 Sum_probs=61.9
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCCCE-----EEEEeCCEEee------ccCCccEEEec-------------CCcEEEEE
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPEPR-----IEWYKDGSLVS------AEIGSHRILLP-------------AGSLFFLS 192 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~p~-----i~W~~~g~~l~------~~~~~~~~~~~-------------~~~l~~~~ 192 (238)
.|..+.+.+|+++.|.|.+.|.|.+. +.|++++.... ........... +..|.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~--- 85 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLR--- 85 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEE---
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEE---
Confidence 35567889999999999999998886 99998632111 00001111111 11243
Q ss_pred eecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 193 LVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 193 vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
|..++.+|+|.|+|.+.|..|... ..+.|.|..+|.
T Consensus 86 -I~~v~~~D~G~Y~C~~~~~~~~~~-~~~~L~V~~~P~ 121 (248)
T 3pv7_A 86 -LPGIQLEEAGEYRCEVVVTPLKAQ-GTVQLEVVASPA 121 (248)
T ss_dssp -ESSCCGGGCEEEEEEEEETTEEEE-EEEEEEEEBCCE
T ss_pred -eCCCCHHHCeEEEEEEEeCCccce-eEEEEEEecCCc
Confidence 677799999999999999998875 588999877543
No 400
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.87 E-value=7.7e-09 Score=79.37 Aligned_cols=84 Identities=19% Similarity=0.306 Sum_probs=56.0
Q ss_pred ceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEEee---cc-------CCccEE-EecCCcEEEEEeecCCCCCCCeEEE
Q psy18191 140 SAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSLVS---AE-------IGSHRI-LLPAGSLFFLSLVHGKKDTDSGVYW 206 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~l~---~~-------~~~~~~-~~~~~~l~~~~vi~~v~~~d~G~Y~ 206 (238)
.+.+.+|+++.|.|.+. |.+.+.|+++ +..+. .. ...+.. ....+...+ .|..++.+|+|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L--~I~~v~~~D~G~Y~ 84 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASL--TVSGLQTDDEAVYY 84 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEE--EEESCCGGGCEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEE--EECCCChhHCEEEE
Confidence 67889999999999998 8899999984 22211 00 011111 112222222 26777999999999
Q ss_pred EEEEeCCC-ceeEEEEEEEEcc
Q psy18191 207 CVARNELG-FARSKNATLDVAG 227 (238)
Q Consensus 207 C~a~N~~G-~~~s~~~~L~V~~ 227 (238)
|.|.|..| ......+.|.|..
T Consensus 85 C~~~~~~~~~~~~~~~~l~V~~ 106 (211)
T 3tv3_L 85 CGSLVGNWDVIFGGGTKLTVLG 106 (211)
T ss_dssp EEEEETTTEEEECCCEEEEECC
T ss_pred EEEecCCCceeECCCceEEEeC
Confidence 99999998 2323467888874
No 401
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.87 E-value=1.4e-08 Score=88.86 Aligned_cols=87 Identities=11% Similarity=0.025 Sum_probs=55.9
Q ss_pred cCCEEEe-CCCceEEeCCCcEEEEEEEeeeCCC--EEEEEeCCEEeeccCC-ccEEEecCCcEEE--EEeecCCCCCCCe
Q psy18191 130 RVPRITE-HPASAVVPRHEPTTLNCKADGYPEP--RIEWYKDGSLVSAEIG-SHRILLPAGSLFF--LSLVHGKKDTDSG 203 (238)
Q Consensus 130 ~~P~i~~-~~~~~~~~~G~~~~L~C~~~g~P~p--~i~W~~~g~~l~~~~~-~~~~~~~~~~l~~--~~vi~~v~~~d~G 203 (238)
.+|.+.. .|....+.+|+.+.|.|.+.|.+++ .|+|+++|..+..... .......+|+... .+.|..+...|.|
T Consensus 295 ~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g 374 (512)
T 1zvo_C 295 QPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGT 374 (512)
T ss_pred CCCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCC
Confidence 3455543 3444556789999999999887443 8999999987652101 1111122343221 1224555788999
Q ss_pred EEEEEEEeCCCce
Q psy18191 204 VYWCVARNELGFA 216 (238)
Q Consensus 204 ~Y~C~a~N~~G~~ 216 (238)
.|+|.|.|..+..
T Consensus 375 ~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 375 SVTCTLNHPSLPP 387 (512)
T ss_pred eEEEEEEeCCCCC
Confidence 9999999998754
No 402
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.86 E-value=4.1e-09 Score=80.93 Aligned_cols=86 Identities=19% Similarity=0.166 Sum_probs=57.3
Q ss_pred CceEEeCCCcEEEEEEEeeeCCCE---EEEEeCCEEeecc--------------CCccEEE----------ecCCcEEEE
Q psy18191 139 ASAVVPRHEPTTLNCKADGYPEPR---IEWYKDGSLVSAE--------------IGSHRIL----------LPAGSLFFL 191 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P~p~---i~W~~~g~~l~~~--------------~~~~~~~----------~~~~~l~~~ 191 (238)
..+.+..|+++.|.|.+.+.|.+. +.|+|++..+... ....... ..+++|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~-- 86 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLA-- 86 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEE--
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEE--
Confidence 346678999999999999887764 8999976443210 0000000 1123454
Q ss_pred EeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 192 SLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 192 ~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|..++.+|+|.|.|.|.|..|........+.+..+
T Consensus 87 --I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~ 121 (225)
T 4fmk_A 87 --FRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQ 121 (225)
T ss_dssp --ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred --EccCCHHHCcceEEEEEeCCCcceeeeeeeeeecC
Confidence 66779999999999999998877544555555443
No 403
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.86 E-value=8.4e-09 Score=73.22 Aligned_cols=98 Identities=19% Similarity=0.317 Sum_probs=61.1
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeC----CCEEEEEeCC-----EEeecc-------CCccEEE-ecCCcEEEEEeec
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYP----EPRIEWYKDG-----SLVSAE-------IGSHRIL-LPAGSLFFLSLVH 195 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P----~p~i~W~~~g-----~~l~~~-------~~~~~~~-~~~~~l~~~~vi~ 195 (238)
.+...|..+.+.+|++++|.|.+.+.+ .+.+.|++.. ..+... ...+... ...+... +.|.
T Consensus 3 ~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~s--L~I~ 80 (126)
T 4ffy_L 3 VLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFT--LTID 80 (126)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE--EEES
T ss_pred cEEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEE--EEEC
Confidence 355556778899999999999998776 5679999842 112110 0111111 1222222 3378
Q ss_pred CCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 196 GKKDTDSGVYWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
.++.+|+|.|.|.+.|........-..|.|.+..+..
T Consensus 81 ~v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~g~~~ 117 (126)
T 4ffy_L 81 SVETDDAATYYCQQNNEDPYTFGGGTKLEIKGGGGSG 117 (126)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEEC-----
T ss_pred CCCHHHCEEEEEEEecCCCcEECCCEEEEEecCCCCC
Confidence 8899999999999998655443345688887765543
No 404
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.86 E-value=3.9e-09 Score=81.20 Aligned_cols=84 Identities=18% Similarity=0.216 Sum_probs=55.6
Q ss_pred CEEEeCCCceEE--eCCCcEEEEEEEeeeCC----CEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCC---C
Q psy18191 132 PRITEHPASAVV--PRHEPTTLNCKADGYPE----PRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTD---S 202 (238)
Q Consensus 132 P~i~~~~~~~~~--~~G~~~~L~C~~~g~P~----p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d---~ 202 (238)
|.+...+....+ .+|+++.|.|.+.|.|+ +.+.|++++..+............+|.+.+...+. +...| .
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~-i~~~d~~d~ 80 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLT-VLHQDWLNG 80 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEE-CCHHHHHTT
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEE-EEHHHccCC
Confidence 444444333433 78999999999998763 49999999987753211112234456666544322 24455 9
Q ss_pred eEEEEEEEeCCCce
Q psy18191 203 GVYWCVARNELGFA 216 (238)
Q Consensus 203 G~Y~C~a~N~~G~~ 216 (238)
|.|+|.|.|..|..
T Consensus 81 g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 81 KEYKCKVSNKALPA 94 (207)
T ss_dssp CCEEEEEECTTSSS
T ss_pred ceEEEEEEcCcCCc
Confidence 99999999998875
No 405
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.85 E-value=5.8e-09 Score=82.92 Aligned_cols=97 Identities=16% Similarity=0.263 Sum_probs=51.7
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CE---EeeccC------------C-ccEEEe--cCCcEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GS---LVSAEI------------G-SHRILL--PAGSLFF 190 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~---~l~~~~------------~-~~~~~~--~~~~l~~ 190 (238)
+|.+...|..+.+.+|+++.|.|.+.+.|.+.+.|++. +. .+.... . ...... ..+..
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-- 79 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNL-- 79 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCC--
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeE--
Confidence 35666667789999999999999999999999999982 11 111100 0 011111 11111
Q ss_pred EEeecCCCCCCCeEEEEEEEeCCCc--eeEEEEEEEEccCC
Q psy18191 191 LSLVHGKKDTDSGVYWCVARNELGF--ARSKNATLDVAGKI 229 (238)
Q Consensus 191 ~~vi~~v~~~d~G~Y~C~a~N~~G~--~~s~~~~L~V~~~~ 229 (238)
.+.|..++.+|+|.|.|.+.|..|. .....+.|.|....
T Consensus 80 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~ 120 (259)
T 3omz_A 80 RMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQ 120 (259)
T ss_dssp EEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC--
T ss_pred EEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCC
Confidence 1237888999999999999998762 22235677777653
No 406
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.85 E-value=2e-08 Score=75.28 Aligned_cols=76 Identities=22% Similarity=0.329 Sum_probs=55.0
Q ss_pred eEEeCCCcEEEEEEEeeeCCC--EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCceeE
Q psy18191 141 AVVPRHEPTTLNCKADGYPEP--RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARS 218 (238)
Q Consensus 141 ~~~~~G~~~~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s 218 (238)
..+.+|+++.|.|.+.|.|.| .+.|++++..+..... ......+ .|. ..+|+|.|+|.|.|.. .
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~------~~~~~~l--~i~--~~~d~G~Y~C~~~n~~--~-- 73 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDAL------PGQKTEF--KVD--SDDQWGEYSCVFLPEP--M-- 73 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTC------CCSEEEE--EEC--GGGCCEEEEEEEESTT--S--
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccc------cCCcEEE--EEe--chhhCeEEEEEEECCc--C--
Confidence 567889999999999998888 8999999988875311 1122222 133 5889999999999932 2
Q ss_pred EEEEEEEccCCC
Q psy18191 219 KNATLDVAGKIS 230 (238)
Q Consensus 219 ~~~~L~V~~~~~ 230 (238)
..+.|.|..+|.
T Consensus 74 ~~~~l~V~~~P~ 85 (184)
T 3b5h_A 74 GTANIQLHGPPR 85 (184)
T ss_dssp CEEEEEECCSCC
T ss_pred cEEEEEEecCCc
Confidence 367788876554
No 407
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.84 E-value=8.6e-09 Score=81.23 Aligned_cols=94 Identities=14% Similarity=0.269 Sum_probs=60.5
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeC-----CCEEEEEeCC--EE---eecc-------CCccEEE-ecCCcEEEEEeec
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYP-----EPRIEWYKDG--SL---VSAE-------IGSHRIL-LPAGSLFFLSLVH 195 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P-----~p~i~W~~~g--~~---l~~~-------~~~~~~~-~~~~~l~~~~vi~ 195 (238)
+...|..+.+.+|+++.|.|.+.+.| .+.+.|+++. .. +... ...+... ...+... +.|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~ 81 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFT--LKIS 81 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEE--EEES
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEE--EEEC
Confidence 45556778899999999999999888 6899999842 21 1110 0111111 1122222 2378
Q ss_pred CCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 196 GKKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.++.+|+|.|.|.|.|..+...+..+.|.|..++
T Consensus 82 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~ 115 (247)
T 1svz_A 82 RVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGG 115 (247)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC---
T ss_pred CCCHHHCEEEEEEEccCCccEECCCEEEEEECCc
Confidence 8899999999999999876532235678876653
No 408
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.84 E-value=3e-09 Score=86.50 Aligned_cols=153 Identities=10% Similarity=0.034 Sum_probs=28.9
Q ss_pred cEEEeccccccccce------EEEEEcCCCCCCCCCceEEEeCCCccc-CCceEEeCCCCcceecceecCCccCCEEE-e
Q psy18191 65 ICLRFQDLLPQSKQG------LMYLVGSQASPDYPNRFSLCNNKTWQK-GLPLKKYHPPSLPLFPGVHGDGYRVPRIT-E 136 (238)
Q Consensus 65 ~~~w~~~~~~~~~~g------~~~l~~~~~~~~~~g~y~~~~~~~~~~-G~y~c~~~~~~~~~~~~~~~~v~~~P~i~-~ 136 (238)
++.|||++..+.... ...+.+.....++++.|+|.+.+.+.. |...-. ... ....+++..+|... .
T Consensus 120 ~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~-~~s-----~~~~L~V~~~P~~~~~ 193 (291)
T 1mq8_A 120 TVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFE-NTS-----APYQLQTFVLPATPPQ 193 (291)
T ss_dssp EEEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEE-ECC-----CCEECBC---------
T ss_pred EEEEEECCEEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCcccc-ccc-----cceEEEEEecCCCCce
Confidence 589999987554322 123444445556666899877764431 322110 001 11233455664321 1
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCCC---EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCC--CeEEEEEEEe
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPEP---RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTD--SGVYWCVARN 211 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~p---~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d--~G~Y~C~a~N 211 (238)
......+.+|+.+.|.|.+.|.|++ .++|+++|..+... ....++.+.+... ..+..+| .+.|.|.|.|
T Consensus 194 ~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~-----~~~~g~~~~~~~~-~~~~~~~~~~~~~~C~~~~ 267 (291)
T 1mq8_A 194 LVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPT-----VTYGNDSFSAKAS-VSVTAEDEGTQRLTCAVIL 267 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCce-----eeecCCeEEEEEe-cceeEcCCCCEEEEEEEEe
Confidence 1112357899999999999998654 59999999888642 1223344443332 1223333 6678898887
Q ss_pred CCCceeEEEEEEEEccCCC
Q psy18191 212 ELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 212 ~~G~~~s~~~~L~V~~~~~ 230 (238)
...... ....|.|..-+.
T Consensus 268 ~~~~~~-~~~~l~v~~~~~ 285 (291)
T 1mq8_A 268 GNQSQE-TLQTVTIYSFPA 285 (291)
T ss_dssp -------------------
T ss_pred CCcceE-EEEEEEEEcCCC
Confidence 554454 366777766443
No 409
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.83 E-value=2.2e-08 Score=76.38 Aligned_cols=88 Identities=17% Similarity=0.177 Sum_probs=58.6
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCCCE---EEEEeCCEEeecc------CCc---------cEEEe-------cCCcEEEE
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPEPR---IEWYKDGSLVSAE------IGS---------HRILL-------PAGSLFFL 191 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~p~---i~W~~~g~~l~~~------~~~---------~~~~~-------~~~~l~~~ 191 (238)
.|..+++.+|+++.|.|.+.+.|.+. |.|+|++..+... ... .+... .+++|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~-- 82 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVL-- 82 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEE--
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEE--
Confidence 35678899999999999999988764 8999976543211 000 00110 112343
Q ss_pred EeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 192 SLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 192 ~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|..++.+|+|.|.|.+.|..+........+.+..+
T Consensus 83 --I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~ 117 (218)
T 4frw_A 83 --LRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVP 117 (218)
T ss_dssp --ESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred --EeeccHHHCCceeEEEEeccCceeeeEEEEEEeee
Confidence 67779999999999999988766544455555443
No 410
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.83 E-value=1.7e-08 Score=79.36 Aligned_cols=93 Identities=16% Similarity=0.308 Sum_probs=60.1
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEe----------------CCEEeeccCC-ccEEEe--cCCcEEEEEe
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYK----------------DGSLVSAEIG-SHRILL--PAGSLFFLSL 193 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~----------------~g~~l~~~~~-~~~~~~--~~~~l~~~~v 193 (238)
.+...|..+.+.+|+++.|.|.+.+.|.+.+.|+| ++........ .+.... ..+... +.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~--L~ 80 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLST--LT 80 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEE--EE
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEE--EE
Confidence 35556677889999999999999999999999998 2222221100 121111 122222 23
Q ss_pred ecCCCCCCCeEEEEEEEeCCCc---eeEEEEEEEEcc
Q psy18191 194 VHGKKDTDSGVYWCVARNELGF---ARSKNATLDVAG 227 (238)
Q Consensus 194 i~~v~~~d~G~Y~C~a~N~~G~---~~s~~~~L~V~~ 227 (238)
|..++.+|+|.|.|.|.|..+. .....+.|.|..
T Consensus 81 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 117 (246)
T 4dzb_B 81 VTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLE 117 (246)
T ss_dssp ECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEec
Confidence 7888999999999999986541 111245677764
No 411
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=98.83 E-value=6.9e-09 Score=82.39 Aligned_cols=141 Identities=12% Similarity=0.145 Sum_probs=74.2
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCc------------ccCCce---EEeCCCCcceecceecCCccCCEEEeCCCceEEeC
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTW------------QKGLPL---KKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPR 145 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~------------~~G~y~---c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~ 145 (238)
..|.|.++.++|+|.|.|...+.. ..|.+. .... .....+. +......+|.+...+....+..
T Consensus 78 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~t~l~-V~~~~~~~P~v~~~~~~~~~~~ 155 (248)
T 3u2s_H 78 LYLQMNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVW-GKGTTVT-VSSASTKGPSVFPLAPSSKSTS 155 (248)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEE-CCCEEEE-ECSCCCBCCEEEEECCC-----
T ss_pred EEEEECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceee-CCCEEEE-EcccCCCCCEEEEeCCCccccC
Confidence 357788888888888887654310 011110 0001 1111111 1112345677765444445567
Q ss_pred CCcEEEEEEEeee-C-CCEEEEEeCCEEeeccCCccEEEecCCcEEEEE--eecCCCCCCCeEEEEEEEeCCCceeEEEE
Q psy18191 146 HEPTTLNCKADGY-P-EPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLS--LVHGKKDTDSGVYWCVARNELGFARSKNA 221 (238)
Q Consensus 146 G~~~~L~C~~~g~-P-~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~--vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~ 221 (238)
|+.+.|.|.+.|. | .+.+.|++++..+...... .....++...+.. .|......| |.|+|.+.|..+... ...
T Consensus 156 g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~-~~~ 232 (248)
T 3u2s_H 156 GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP-AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDK 232 (248)
T ss_dssp -CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC-CEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEE-EEE
T ss_pred CCcEEEEEEEeeEECCCeEEEEeECCccCceeecC-ceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcc-eEE
Confidence 9999999999874 4 3579999988643221111 1122344433221 244446667 999999999987764 355
Q ss_pred EEEEc
Q psy18191 222 TLDVA 226 (238)
Q Consensus 222 ~L~V~ 226 (238)
.|.+.
T Consensus 233 ~l~~~ 237 (248)
T 3u2s_H 233 KVEPK 237 (248)
T ss_dssp ECCC-
T ss_pred EEccC
Confidence 55443
No 412
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.82 E-value=8e-10 Score=86.29 Aligned_cols=98 Identities=16% Similarity=0.294 Sum_probs=48.7
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--EEe---ecc------CCccEEEecCCcEEEEEeecCCC
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--SLV---SAE------IGSHRILLPAGSLFFLSLVHGKK 198 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~~l---~~~------~~~~~~~~~~~~l~~~~vi~~v~ 198 (238)
..+.+...|..+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+ ... ....++............|..++
T Consensus 22 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 101 (233)
T 3bqu_C 22 AETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENML 101 (233)
T ss_dssp -CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----
T ss_pred cceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCC
Confidence 3455666677888999999999999999988899999853 211 100 00011111100111122366779
Q ss_pred CCCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 199 DTDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
.+|+|.|.|.|.|..+...+....|.|..
T Consensus 102 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 130 (233)
T 3bqu_C 102 SEDVADYYCLQSDNLPYTFGGGTNLEIKR 130 (233)
T ss_dssp CCCCSEEEEEECSSSSCCBCCCCBC---C
T ss_pred HHHCEEEEEEEecCCceeecCCEEEEEeC
Confidence 99999999999998764322234566654
No 413
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.81 E-value=2.3e-08 Score=70.23 Aligned_cols=90 Identities=19% Similarity=0.257 Sum_probs=55.5
Q ss_pred CCCceEEeCCCcEEEEEEEeee----CCCEEEEEeCCE----E--ee-cc----------CCccEEEec------CCcEE
Q psy18191 137 HPASAVVPRHEPTTLNCKADGY----PEPRIEWYKDGS----L--VS-AE----------IGSHRILLP------AGSLF 189 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~----P~p~i~W~~~g~----~--l~-~~----------~~~~~~~~~------~~~l~ 189 (238)
.|..+.+.+|+++.|.|...+. +.+.+.|++++. . +. .. ....+..+. +.+|.
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIV 84 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEE
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEE
Confidence 3456788999999999998543 567899998532 1 11 00 001222221 23443
Q ss_pred EEEeecCCCCCCCeEEEEEEEeCCCce-eEEEEEEEEccCCC
Q psy18191 190 FLSLVHGKKDTDSGVYWCVARNELGFA-RSKNATLDVAGKIS 230 (238)
Q Consensus 190 ~~~vi~~v~~~d~G~Y~C~a~N~~G~~-~s~~~~L~V~~~~~ 230 (238)
|..++.+|+|.|.|.+.|..+.. ....+.|.|..+++
T Consensus 85 ----I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p~ 122 (124)
T 1neu_A 85 ----IHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122 (124)
T ss_dssp ----ECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC---
T ss_pred ----EccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCCC
Confidence 67779999999999999987752 23588999987654
No 414
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.81 E-value=2e-08 Score=78.99 Aligned_cols=92 Identities=23% Similarity=0.375 Sum_probs=58.5
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEEe---ecc----------CCccEEEe-cCCcEEEEEeecCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSLV---SAE----------IGSHRILL-PAGSLFFLSLVHGK 197 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~l---~~~----------~~~~~~~~-~~~~l~~~~vi~~v 197 (238)
+...|..+.+.+|+++.|.|.+.+.|.+.+.|++. +..+ ... ........ ..+... +.|..+
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~s--L~I~~v 81 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFI--LSSKKL 81 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEE--EEESSC
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEE--EEECCC
Confidence 44556778899999999999999999999999982 2111 000 00111111 112222 237888
Q ss_pred CCCCCeEEEEEEEeCCC-----ceeEEEEEEEEcc
Q psy18191 198 KDTDSGVYWCVARNELG-----FARSKNATLDVAG 227 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G-----~~~s~~~~L~V~~ 227 (238)
+.+|+|.|.|.+.|..| ......+.|.|..
T Consensus 82 ~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~ 116 (245)
T 3nfj_J 82 LLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVE 116 (245)
T ss_dssp CGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEES
T ss_pred ChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEc
Confidence 99999999999999332 2212345677765
No 415
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.81 E-value=2.1e-08 Score=69.12 Aligned_cols=77 Identities=23% Similarity=0.318 Sum_probs=50.4
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeee--CCCEEEEEeCC--E---EeeccCCccEE-EecCCcEEEEEeecCCCCCCCeEE
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGY--PEPRIEWYKDG--S---LVSAEIGSHRI-LLPAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~g--~---~l~~~~~~~~~-~~~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
+...|..+.+.+|+++.|.|.+.+. +.+.+.|+++. . .+... .++.. ....+.....+.|..++.+|+|.|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y 81 (108)
T 2coq_A 3 VDQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISI-GGRYSETVDEGSNSASLTIRDLRVEDSGTY 81 (108)
T ss_dssp EEEECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCC-BTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred eEeCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEe-CCceEEEEcCCCCEEEEEECCCCcccCEEE
Confidence 3445677889999999999999765 35789999862 2 12211 12221 111111122233788899999999
Q ss_pred EEEEEe
Q psy18191 206 WCVARN 211 (238)
Q Consensus 206 ~C~a~N 211 (238)
.|.+.|
T Consensus 82 ~C~~~~ 87 (108)
T 2coq_A 82 KCKAYR 87 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999998
No 416
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.81 E-value=3.2e-08 Score=68.47 Aligned_cols=79 Identities=13% Similarity=0.203 Sum_probs=53.2
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC-----EEeecc-------CCccEEEe-cCCcEEEEEeecCCC
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG-----SLVSAE-------IGSHRILL-PAGSLFFLSLVHGKK 198 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g-----~~l~~~-------~~~~~~~~-~~~~l~~~~vi~~v~ 198 (238)
+.+...|..+.+.+|++++|.|.+.+.+.+.+.|++.. ..+... ...+.... ..+... +.|..++
T Consensus 5 ~~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~--L~I~~v~ 82 (111)
T 1i3g_L 5 IVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFT--LTISNVQ 82 (111)
T ss_dssp CCEEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEESSCC
T ss_pred ceEEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEE--EEECCCC
Confidence 34555667788999999999999988888899999853 122110 01111111 122222 2378889
Q ss_pred CCCCeEEEEEEEeC
Q psy18191 199 DTDSGVYWCVARNE 212 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~ 212 (238)
.+|+|.|.|.+.|.
T Consensus 83 ~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 83 SEDLADYFCQQYSS 96 (111)
T ss_dssp GGGCSEEEEEECSS
T ss_pred HHHCEEEEEEEecC
Confidence 99999999999886
No 417
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.81 E-value=3.5e-09 Score=86.76 Aligned_cols=93 Identities=15% Similarity=0.167 Sum_probs=66.6
Q ss_pred CCceEEeCCCcEEEEEEEeee-----CCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 138 PASAVVPRHEPTTLNCKADGY-----PEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~-----P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
|.+..+..|+++.|.|.+.+. |.|.+.|+++|..+.. .......++.....+.|..+...|+|.|+|.|.|.
T Consensus 7 p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~---~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~ 83 (313)
T 2d9q_B 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPG---GRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGN 83 (313)
T ss_dssp ESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTT---CEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSS
T ss_pred CCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCc---cceEEEecCeEEEEEEEeccCCCccceEEeeecCC
Confidence 356778999999999999987 6789999999987742 22222233321111126777999999999999776
Q ss_pred CCceeEEEEEEEEccCCCCCCC
Q psy18191 213 LGFARSKNATLDVAGKISTATD 234 (238)
Q Consensus 213 ~G~~~s~~~~L~V~~~~~~~~~ 234 (238)
.+... ..+.|.|..+|+.|.+
T Consensus 84 ~~~~~-~~~~l~v~~~P~~P~~ 104 (313)
T 2d9q_B 84 SLQIL-DQVELRAGYPPAIPHN 104 (313)
T ss_dssp SEEEE-EEEEEEECCCCCCCEE
T ss_pred CceeE-EEEEEccCCCCCCCcc
Confidence 55553 4788888888877754
No 418
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=3.9e-08 Score=70.58 Aligned_cols=102 Identities=22% Similarity=0.351 Sum_probs=63.6
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeee-CCCEEEEEeCCE----EeeccCCc--cEEEe-----cCCcEEEEEeecCCCC
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGY-PEPRIEWYKDGS----LVSAEIGS--HRILL-----PAGSLFFLSLVHGKKD 199 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~p~i~W~~~g~----~l~~~~~~--~~~~~-----~~~~l~~~~vi~~v~~ 199 (238)
..+...|..+.+.+|++++|.|.+.+. |.+.+.|++++. .+...... .+... ..+.....+.|..++.
T Consensus 9 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 88 (136)
T 2d9c_A 9 LQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITP 88 (136)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCT
T ss_pred eEEEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCH
Confidence 345555667889999999999999775 567899999752 12111000 01110 0000011223778899
Q ss_pred CCCeEEEEEEEeCCCc--ee---EEEEEEEEccCCCCCC
Q psy18191 200 TDSGVYWCVARNELGF--AR---SKNATLDVAGKISTAT 233 (238)
Q Consensus 200 ~d~G~Y~C~a~N~~G~--~~---s~~~~L~V~~~~~~~~ 233 (238)
+|+|.|.|.+.|..+. .. ...+.|.|..+++.|.
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s~P~ 127 (136)
T 2d9c_A 89 ADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPV 127 (136)
T ss_dssp TTCEEEEEEEEECCSSSCEEEEECCCEEEEEECCCCCCC
T ss_pred HHCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCCCCc
Confidence 9999999999986541 11 1257899988776554
No 419
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.80 E-value=3.5e-08 Score=80.29 Aligned_cols=92 Identities=15% Similarity=0.068 Sum_probs=63.7
Q ss_pred eCCCceEEeCCCcEEEEEEEeee-------CCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGY-------PEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~-------P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
..|.+..+..|+++.|.|.+.|. |.|.+.|+++|..+... ...+ ..+.... ..|..+...| |.|+|.
T Consensus 9 i~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~--~~~~-~~~~~~~--L~i~~~~~~~-g~Y~C~ 82 (303)
T 1i1r_A 9 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE--QYTI-INRTASS--VTFTDIASLN-IQLTCN 82 (303)
T ss_dssp EESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG--GCEE-EETTEEE--EEECSCCCSE-EEEEEE
T ss_pred EccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh--heee-eCCcEEE--EEEcCcCCCc-eEEEEe
Confidence 34677889999999999999864 88999999999988642 2222 2222111 2256667764 999999
Q ss_pred EEeCCCcee--EEEEEEEEccCCCCCCC
Q psy18191 209 ARNELGFAR--SKNATLDVAGKISTATD 234 (238)
Q Consensus 209 a~N~~G~~~--s~~~~L~V~~~~~~~~~ 234 (238)
|.|. |... ...+.|.+..+|+.|.+
T Consensus 83 a~~~-g~~~~~~~~~~l~v~~~P~~P~~ 109 (303)
T 1i1r_A 83 ILTF-GQLEQNVYGITIISGLPPEKPKN 109 (303)
T ss_dssp EEET-TTEEEEEEEEEEEEECCCCCCEE
T ss_pred cccC-CCcceEEEEEEEeccCCCCCCee
Confidence 9884 4331 23566778888877754
No 420
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.80 E-value=5e-09 Score=73.95 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=63.7
Q ss_pred ceEEeCCCcEEEEEEE-eeeCCCEEEEEeCCE-Eeecc----------CCccEEEe--cCCcEEEEEeecCCCCCCCeEE
Q psy18191 140 SAVVPRHEPTTLNCKA-DGYPEPRIEWYKDGS-LVSAE----------IGSHRILL--PAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~-~g~P~p~i~W~~~g~-~l~~~----------~~~~~~~~--~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
.+.+.+|++++|.|.. ...+...+.|+++.. .+... ....+..+ .+++|. |.+++.+|+|.|
T Consensus 13 pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~----I~nv~~~DsG~Y 88 (121)
T 2edo_A 13 HMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALY----ISKVQKEDNSTY 88 (121)
T ss_dssp CCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEE----ESSCCGGGCSEE
T ss_pred EEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEE----EeCCCHHHCeEE
Confidence 4678899999999986 444556899998653 22110 00112222 345665 666699999999
Q ss_pred EEEEEeCCCceeEEEEEEEEccCCCCCCCC
Q psy18191 206 WCVARNELGFARSKNATLDVAGKISTATDC 235 (238)
Q Consensus 206 ~C~a~N~~G~~~s~~~~L~V~~~~~~~~~~ 235 (238)
.|.+.|..+......+.|.|..+++.|...
T Consensus 89 ~c~v~~~~~~~~~~~~~L~V~~~~~~P~I~ 118 (121)
T 2edo_A 89 IMRVLKKTGNEQEWKIKLQVLDPVPKPVIK 118 (121)
T ss_dssp EEEEEETTTEEEECCEECEEECCSCCCCCC
T ss_pred EEEEEcCCCcEEEEEEEEEEECCCCCCEEE
Confidence 999998876544468899999988877643
No 421
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.80 E-value=1.8e-08 Score=80.55 Aligned_cols=98 Identities=17% Similarity=0.266 Sum_probs=64.2
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeC------CCEEEEEeC--CEE---eecc-------CCccEEEe-cCCcEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYP------EPRIEWYKD--GSL---VSAE-------IGSHRILL-PAGSLFF 190 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P------~p~i~W~~~--g~~---l~~~-------~~~~~~~~-~~~~l~~ 190 (238)
..+.+...|..+.+.+|+++.|.|.+.+.| .+.+.|+++ +.. +... ...+.... ..+..
T Consensus 4 ~~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~-- 81 (264)
T 2gjj_A 4 ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDF-- 81 (264)
T ss_dssp CCCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEE--
T ss_pred cccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEE--
Confidence 345666677888999999999999998887 688999984 221 1110 01121111 12222
Q ss_pred EEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 191 LSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 191 ~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
.+.|..++.+|+|.|.|.+.|..+......+.|.|..++
T Consensus 82 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~ 120 (264)
T 2gjj_A 82 TLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGG 120 (264)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-
T ss_pred EEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCC
Confidence 223788899999999999999866432235678887653
No 422
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.80 E-value=2.7e-08 Score=76.34 Aligned_cols=92 Identities=22% Similarity=0.304 Sum_probs=61.0
Q ss_pred eCCCceEEeCCCcEEEEEEEeee-------CCCEEEEEeCCEE------eec---------cCCccEEEec-----CCcE
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGY-------PEPRIEWYKDGSL------VSA---------EIGSHRILLP-----AGSL 188 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~-------P~p~i~W~~~g~~------l~~---------~~~~~~~~~~-----~~~l 188 (238)
..|..+.+.+|+++.|.|.+.+. +.+.+.|++++.. +.. ....+..... +.+|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 34667889999999999998754 5788999998652 110 0012222221 1234
Q ss_pred EEEEeecCCCCCCCeEEEEEEEeCCCceeE---EEEEEEEccCCCC
Q psy18191 189 FFLSLVHGKKDTDSGVYWCVARNELGFARS---KNATLDVAGKIST 231 (238)
Q Consensus 189 ~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~s---~~~~L~V~~~~~~ 231 (238)
. |..++.+|+|.|.|.+.|..+...+ ..+.|.|...+..
T Consensus 85 ~----I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~ 126 (214)
T 2zg1_A 85 S----IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEK 126 (214)
T ss_dssp E----ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCC
T ss_pred E----EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCC
Confidence 4 6777999999999999998743321 3677888775443
No 423
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.80 E-value=3.2e-09 Score=82.44 Aligned_cols=87 Identities=9% Similarity=0.067 Sum_probs=57.7
Q ss_pred cCCEEEeCCCceE--EeCCCcEEEEEEEeee---CC-CEEEEEeCCEEeeccCCccEEEecCCcE--EEEEeecCCCCCC
Q psy18191 130 RVPRITEHPASAV--VPRHEPTTLNCKADGY---PE-PRIEWYKDGSLVSAEIGSHRILLPAGSL--FFLSLVHGKKDTD 201 (238)
Q Consensus 130 ~~P~i~~~~~~~~--~~~G~~~~L~C~~~g~---P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l--~~~~vi~~v~~~d 201 (238)
.+|.+...+.... +.+|+++.|.|.+.|. |. +.|.|++++..+............++.. ...+.|..+..+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 5677765555544 7899999999999987 44 7899999998765321000111122221 1122356668899
Q ss_pred CeEEEEEEEeCCCce
Q psy18191 202 SGVYWCVARNELGFA 216 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~ 216 (238)
.|.|+|.|.|..+..
T Consensus 88 ~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPS 102 (218)
T ss_dssp TCCEEEEEEETTCSS
T ss_pred CCeEEEEEECCcCCC
Confidence 999999999998754
No 424
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.79 E-value=4.2e-08 Score=68.10 Aligned_cols=91 Identities=19% Similarity=0.213 Sum_probs=56.8
Q ss_pred CCceEEeCCCcEEEEEEEee-eCCCEEEEEeCCEE--------eeccC------CccEEEe----cCCcEEEEEeecCCC
Q psy18191 138 PASAVVPRHEPTTLNCKADG-YPEPRIEWYKDGSL--------VSAEI------GSHRILL----PAGSLFFLSLVHGKK 198 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g-~P~p~i~W~~~g~~--------l~~~~------~~~~~~~----~~~~l~~~~vi~~v~ 198 (238)
+..+.+.+|+++.|.|...+ .+.+.+.|++.... +.... ...++.. ..+... +.|..++
T Consensus 4 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s--L~I~~v~ 81 (116)
T 2or8_A 4 YVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVS--LTIENSV 81 (116)
T ss_dssp CEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCC--EEESSCC
T ss_pred cceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEE--EEECCCC
Confidence 34678899999999999865 34567999997521 11100 0111111 111111 2277789
Q ss_pred CCCCeEEEEEEEeCCCce-eEEEEEEEEccCCC
Q psy18191 199 DTDSGVYWCVARNELGFA-RSKNATLDVAGKIS 230 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~~G~~-~s~~~~L~V~~~~~ 230 (238)
.+|+|.|.|.+.|..+.. ....+.|.|.+...
T Consensus 82 ~~DsG~Y~C~v~~~~~~~~~~~~~~l~V~p~~~ 114 (116)
T 2or8_A 82 ESDSGLYCCRVEIPGWFNDQKVTFSLQVKPELV 114 (116)
T ss_dssp GGGCEEEEEEECCSSTTCCEEEEEEEEEECSCC
T ss_pred cccCEEEEEEEEcCCcccccEEEEEEEECCccC
Confidence 999999999999976443 13477888865443
No 425
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.79 E-value=2.1e-08 Score=78.34 Aligned_cols=93 Identities=17% Similarity=0.333 Sum_probs=56.2
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEEee-------------ccCCcc-EEEe-cCCcEEEEEeecC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSLVS-------------AEIGSH-RILL-PAGSLFFLSLVHG 196 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~l~-------------~~~~~~-~~~~-~~~~l~~~~vi~~ 196 (238)
+...|..+.+.+|+++.|.|. .+.|.|.+.|+++ +..+. .....+ .... ..+... +.|..
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~--L~I~~ 79 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFS--LILEL 79 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCE--EEESS
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEE--EEEec
Confidence 445567788999999999999 7889999999985 21110 000111 1111 111111 23778
Q ss_pred CCCCCCeEEEEEEEeCCCce----eEEEEEEEEccCC
Q psy18191 197 KKDTDSGVYWCVARNELGFA----RSKNATLDVAGKI 229 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~~----~s~~~~L~V~~~~ 229 (238)
++.+|+|.|.|.|.|..|.. ......|.|...+
T Consensus 80 v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~ 116 (238)
T 2p1y_A 80 ATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSA 116 (238)
T ss_dssp CCGGGCEEEEEEEEC------CEEECCCEEEEEECCC
T ss_pred CCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccC
Confidence 89999999999999987631 1124467775543
No 426
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.79 E-value=1.3e-08 Score=78.07 Aligned_cols=88 Identities=18% Similarity=0.301 Sum_probs=56.3
Q ss_pred CCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEEee---cc-------CCccEE-EecCCcEEEEEeecCCCCCCCeE
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSLVS---AE-------IGSHRI-LLPAGSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~l~---~~-------~~~~~~-~~~~~~l~~~~vi~~v~~~d~G~ 204 (238)
|..+.+.+|+++.|.|.+.+.|.|.+.|+++ |..+. .. ...+.. ....+...+ .|..++.+|+|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L--~I~~v~~~D~G~ 83 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATL--TISGAQPEDEAA 83 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEE--EETTCCGGGCSE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEE--EECcCCcccCEE
Confidence 6678899999999999998988889999984 33221 00 011211 112222222 378889999999
Q ss_pred EEEEEEeCCC-ce-eEEEEEEEEcc
Q psy18191 205 YWCVARNELG-FA-RSKNATLDVAG 227 (238)
Q Consensus 205 Y~C~a~N~~G-~~-~s~~~~L~V~~ 227 (238)
|.|.|.|..+ .. ....+.|.|..
T Consensus 84 Y~C~~~n~~~~~~~~~~~~~l~V~~ 108 (212)
T 1nfd_E 84 YYCLSSYGDNNDLVFGSGTQLTVLR 108 (212)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEEC
T ss_pred EEEEEEcccCcccccCCceEEEEcc
Confidence 9999998332 21 11245666643
No 427
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.79 E-value=5.7e-08 Score=70.81 Aligned_cols=97 Identities=15% Similarity=0.261 Sum_probs=60.3
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC-----EEeeccC-------CccEEEe-cCCcEEEEEeecCC
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG-----SLVSAEI-------GSHRILL-PAGSLFFLSLVHGK 197 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g-----~~l~~~~-------~~~~~~~-~~~~l~~~~vi~~v 197 (238)
.+.+...|..+.+.+|++++|.|.+.+.+.+.+.|++.. ..|.... ..+.... ..+.. .+.|..+
T Consensus 16 ~~~v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~--sL~I~~v 93 (146)
T 2yc1_B 16 EIVLTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDF--TLTISSL 93 (146)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEE--EEEESSC
T ss_pred cceEEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEE--EEEECCC
Confidence 345566677788999999999999988777889999853 1222110 1111111 12222 2337888
Q ss_pred CCCCCeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 198 KDTDSGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
+.+|+|.|.|.+.|........-..|.|..+.
T Consensus 94 ~~~DsG~Y~C~~~~~~~~~fg~GT~L~V~~~~ 125 (146)
T 2yc1_B 94 EPEDFAIYYCQQYRYSPRTFGQGTKVEIKRAA 125 (146)
T ss_dssp CGGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred CHHHCEEEEEEEecCCCCeECCCEEEEEeCCc
Confidence 99999999999988643221124467776543
No 428
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.78 E-value=3.4e-08 Score=74.47 Aligned_cols=88 Identities=16% Similarity=0.132 Sum_probs=60.9
Q ss_pred CceEEeCCCcEEEEEEEee-eCCCEEEEEeC-CEEeec-c---------CC--ccEEE-ecCCcEEEEEeecCCCCCCCe
Q psy18191 139 ASAVVPRHEPTTLNCKADG-YPEPRIEWYKD-GSLVSA-E---------IG--SHRIL-LPAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g-~P~p~i~W~~~-g~~l~~-~---------~~--~~~~~-~~~~~l~~~~vi~~v~~~d~G 203 (238)
..+.+.+|+++.|.|.+.+ .+.+.|.|+++ +..+.. . .. ++... ..+++|. |+.++.+|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~----I~~v~~~D~G 82 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALR----IYNVSKEDRG 82 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEE----ECSCCGGGCE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEE----EcCCCHHHCe
Confidence 4577899999999999744 45789999994 333221 0 00 22222 3456666 5666999999
Q ss_pred EEEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 204 VYWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
.|.|.+.+.. ... ..+.|.|..+++.|
T Consensus 83 ~Y~C~v~~~~-~~~-~~~~L~V~~~~~~P 109 (180)
T 2dru_A 83 DYYMRMLHET-EDQ-WKITMEVYEMVSKP 109 (180)
T ss_dssp EEEEEEESSS-EEE-EEEEEEEECCCCCC
T ss_pred EEEEEEEcCC-eEE-EEEEEEEECCCCCC
Confidence 9999998876 443 58899998776554
No 429
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.78 E-value=6.8e-09 Score=91.92 Aligned_cols=89 Identities=28% Similarity=0.386 Sum_probs=67.1
Q ss_pred ceEEeCCCcEEEEEEE-eeeCCCEEEEEeCCEEeecc----------CCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 140 SAVVPRHEPTTLNCKA-DGYPEPRIEWYKDGSLVSAE----------IGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~-~g~P~p~i~W~~~g~~l~~~----------~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
...+.+|+++.|.|.+ .+.|.|.+.|++++..+... ...+.....+++|. |..++.+|+|.|+|.
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~----i~~v~~~D~G~Y~C~ 450 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLF----LPAVGIQDEGIFRCQ 450 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEE----ESSCCGGGCEEEEEE
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEE----EeccccccCeEEEEE
Confidence 4678999999999998 88999999999986522110 01122334456665 566699999999999
Q ss_pred EEeCCCceeEEEEEEEEccCCCCC
Q psy18191 209 ARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 209 a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
+.|..|......+.|.|..++..|
T Consensus 451 ~~n~~~~~~~~~~~l~V~~~~~~p 474 (581)
T 3o3u_N 451 AMNRNGKETKSNYRVRVYQIPGKP 474 (581)
T ss_dssp EECTTSCEEEEEEEEEEEBCCCCC
T ss_pred EEcCCCceeEEEEEEEEEcCCCCC
Confidence 999999984468999998766654
No 430
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=98.77 E-value=1.5e-08 Score=79.25 Aligned_cols=140 Identities=13% Similarity=0.199 Sum_probs=76.7
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCcc--cCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEeee
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQ--KGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGY 158 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~--~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~ 158 (238)
..|.|.++..+|+|.|.|...+... ...+.-.+. ....+. +......+|.+...+....+..|+.+.|.|.+.+.
T Consensus 79 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~--~~~~l~-V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~ 155 (230)
T 3n9g_H 79 VYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWG--QGTLVT-VSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY 155 (230)
T ss_dssp EEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEEC--CCEEEE-ECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEccCCCCcccccccccC--CCEEEE-EEecCCCCCEEEecCCCccccCCCCEEEEEEEEeE
Confidence 3477778888888888866543210 000000111 111111 11123456777643334445689999999999885
Q ss_pred -C-CCEEEEEeCCEEeeccCC-ccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 159 -P-EPRIEWYKDGSLVSAEIG-SHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 159 -P-~p~i~W~~~g~~l~~~~~-~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
| .+.+.| ++..+..... .......++.... ...|......| |.|+|.+.|..+... ....|.|..
T Consensus 156 ~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~-~~~~~~v~~ 225 (230)
T 3n9g_H 156 FPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKRVEPKS 225 (230)
T ss_dssp BSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEE-EEEECCCCT
T ss_pred ECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcc-eEEEccCCC
Confidence 4 346899 6554432100 0011223343322 22356667788 999999999988764 366666654
No 431
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.77 E-value=1.9e-07 Score=74.14 Aligned_cols=136 Identities=13% Similarity=0.162 Sum_probs=83.8
Q ss_pred ccEEEeccccccccceEEEEEcCCCCCCCCCceEEEeCCCcccCCceEEeCCCCcceecceecCCccCCEEE-eCCCceE
Q psy18191 64 PICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRIT-EHPASAV 142 (238)
Q Consensus 64 ~~~~w~~~~~~~~~~g~~~l~~~~~~~~~~g~y~~~~~~~~~~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~-~~~~~~~ 142 (238)
.++.|||++.++..... .+.+......++|.|+|...+. .|--.+. . ...+. ....+.+. ..|.+..
T Consensus 36 yTYqWyKDG~~IsGaT~-tLti~s~t~sdSG~YqCvVTDa--~Gcs~tS---s-~VtVT-----~~a~l~i~it~P~s~~ 103 (304)
T 3shs_A 36 LTYTWTKDDQPHENNTA-TLTVADATSENAGSYKVTVQDT--DTMTSVE---S-EVFLM-----EEAELIVNITEPQHFY 103 (304)
T ss_dssp EEEEEEETTEECSCCSS-EEEESSCCGGGCEEEEEEEEET--TTCCEEE---C-CCEEE-----CBCCEEEEESSCSEEE
T ss_pred ceEEEEECCccccCCcc-eEEeeeccccCCeEEEEEEEEC--CCCeeee---e-eEEEe-----ccCceeEEecCCCcee
Confidence 47999999987664322 4566777788899999765442 2211111 1 01111 11222332 2366677
Q ss_pred EeCCCcEEEEEEE--e-eeC-----CCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 143 VPRHEPTTLNCKA--D-GYP-----EPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 143 ~~~G~~~~L~C~~--~-g~P-----~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
+..|..+.|.+.+ . |.| ..+++|++++..+.. ...+. +...+..++|.|.|.+.|..|
T Consensus 104 vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg----------Aq~lT----~sS~TateaG~YtV~VTn~~~ 169 (304)
T 3shs_A 104 VSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT----------TQDIT----IQEFTADKNGVYTVKVWGESE 169 (304)
T ss_dssp ECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES----------SSEEE----ECSCCGGGCEEEEEEEESSSG
T ss_pred ccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC----------ccccc----eeeEEecCCeEEEEEEEcCCC
Confidence 7788899999887 3 444 469999999987752 11223 223378899999999999987
Q ss_pred -ceeEEEEEEEE
Q psy18191 215 -FARSKNATLDV 225 (238)
Q Consensus 215 -~~~s~~~~L~V 225 (238)
...+..+.+.+
T Consensus 170 ~c~~s~~~~i~~ 181 (304)
T 3shs_A 170 DSAASASTKIML 181 (304)
T ss_dssp GGCEEEEEEEEE
T ss_pred CcccccceEEEE
Confidence 44444444443
No 432
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.77 E-value=2.7e-08 Score=76.65 Aligned_cols=89 Identities=15% Similarity=0.190 Sum_probs=55.5
Q ss_pred CCceEEeCCCcEEEEEEE-eeeC-CCEEEEEeCC--EEe---ec-------cCCccEEEe-cCCcEEEEEeecCCCCCCC
Q psy18191 138 PASAVVPRHEPTTLNCKA-DGYP-EPRIEWYKDG--SLV---SA-------EIGSHRILL-PAGSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~-~g~P-~p~i~W~~~g--~~l---~~-------~~~~~~~~~-~~~~l~~~~vi~~v~~~d~ 202 (238)
|..+.+.+|+++.|.|.+ .+.+ .+.+.|++++ ..+ .. ....+.... ..+... +.|..++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~v~~~D~ 84 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSAT--LGITGLQTGDE 84 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEE--EEECSCCGGGC
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEE--EEECCCCcccC
Confidence 556788999999999995 4443 5899999853 221 10 001121111 122222 23788899999
Q ss_pred eEEEEEEEeCCC-ceeEEEEEEEEccC
Q psy18191 203 GVYWCVARNELG-FARSKNATLDVAGK 228 (238)
Q Consensus 203 G~Y~C~a~N~~G-~~~s~~~~L~V~~~ 228 (238)
|.|.|.|.|..| ......+.|.|...
T Consensus 85 G~Y~C~~~~~~~~~~~~~~~~l~V~~~ 111 (216)
T 2xzc_L 85 ADYYCGTWDSSLNPVFGGGTKLEIKRT 111 (216)
T ss_dssp EEEEEEEECTTSCEEEBCCEEEEECCC
T ss_pred EEEEEEEEeCCCcceECCCEEEEEcCC
Confidence 999999999887 22223556777543
No 433
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.76 E-value=5.3e-08 Score=69.16 Aligned_cols=81 Identities=25% Similarity=0.347 Sum_probs=53.7
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeee--CCCEEEEEeC--CEE---eeccCCccEE-EecCCcEEEEEeecCCCCCCCeE
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGY--PEPRIEWYKD--GSL---VSAEIGSHRI-LLPAGSLFFLSLVHGKKDTDSGV 204 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~--g~~---l~~~~~~~~~-~~~~~~l~~~~vi~~v~~~d~G~ 204 (238)
.+...|..+.+.+|++++|.|...+. +.+.+.|++. +.. +... .++.. ....+.....+.|..++.+|+|.
T Consensus 2 ~V~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~-~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 80 (126)
T 3moq_A 2 WVDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISI-GGRYVETVNKGSKSFSLRISDLRVEDSGT 80 (126)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCC-BTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred ceEECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEe-CCcEEEEEeCCCCEEEEEECcCChHhCEE
Confidence 45566778899999999999999765 5678999983 321 1111 12221 11111112223478889999999
Q ss_pred EEEEEEeCCC
Q psy18191 205 YWCVARNELG 214 (238)
Q Consensus 205 Y~C~a~N~~G 214 (238)
|.|.+.|..+
T Consensus 81 Y~C~~~~~~~ 90 (126)
T 3moq_A 81 YKCQAFYVFF 90 (126)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEcCC
Confidence 9999998765
No 434
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.76 E-value=8.6e-09 Score=84.98 Aligned_cols=88 Identities=16% Similarity=0.154 Sum_probs=64.6
Q ss_pred eCCCceEEeCCCcEEEEEEEeeeC-CCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCC
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGYP-EPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELG 214 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~P-~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G 214 (238)
..+..+.+..|+++.|.|.+.+.| .+.|.|++++..+.. ...+....++.|. |..+...|+|.|+|. ..|
T Consensus 11 ~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~--~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~---~~g 81 (325)
T 1n26_A 11 VARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGS--HPSRWAGMGRRLL----LRSVQLHDSGNYSCY---RAG 81 (325)
T ss_dssp CCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSC--CCEEEEEESSEEE----ECSCCGGGCEEEEEE---SSS
T ss_pred cCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCc--cccccccccceEE----ecccchhhCeEeEEE---eCC
Confidence 333445557999999999988765 789999998766522 1223334456665 566699999999999 378
Q ss_pred ceeEEEEEEEEccCCCCCC
Q psy18191 215 FARSKNATLDVAGKISTAT 233 (238)
Q Consensus 215 ~~~s~~~~L~V~~~~~~~~ 233 (238)
... ..+.|.|..+|+.|.
T Consensus 82 ~~~-~~~~L~V~~pP~~P~ 99 (325)
T 1n26_A 82 RPA-GTVHLLVDVPPEEPQ 99 (325)
T ss_dssp SCS-CEEEEEECCCCCCCC
T ss_pred EEe-eeEEEEeccCCCCCc
Confidence 876 589999998887765
No 435
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.76 E-value=6.4e-08 Score=74.66 Aligned_cols=88 Identities=19% Similarity=0.382 Sum_probs=57.2
Q ss_pred CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeC--CEEeec----c-----------CCccEEEec---CCcEEEEEeec
Q psy18191 138 PASAVVPRHEPTTLNCKADGYP--EPRIEWYKD--GSLVSA----E-----------IGSHRILLP---AGSLFFLSLVH 195 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~--g~~l~~----~-----------~~~~~~~~~---~~~l~~~~vi~ 195 (238)
|..+.+.+|+++.|.|.+.|.| .+.+.|+++ +..+.. . ...+..... .+.. .+.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~--~L~I~ 84 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTA--YLQIN 84 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEE--EEEEC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEE--EEEEC
Confidence 5567889999999999999875 689999986 332210 0 011111111 1111 22378
Q ss_pred CCCCCCCeEEEEEEEeCCCce---eEEEEEEEEcc
Q psy18191 196 GKKDTDSGVYWCVARNELGFA---RSKNATLDVAG 227 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~---~s~~~~L~V~~ 227 (238)
.++.+|+|.|.|.|.|..|.. ....+.|.|..
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred CCCcccCEEEEEEEeccCcccceeecCceEEEEec
Confidence 889999999999999987421 11256777765
No 436
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.76 E-value=1.7e-08 Score=69.21 Aligned_cols=82 Identities=18% Similarity=0.136 Sum_probs=53.1
Q ss_pred ceEEeCCCcEEEEEEEeeeCCC---EEEEEeCCEE-------e-eccC-------CccEEEec-----CCcEEEEEeecC
Q psy18191 140 SAVVPRHEPTTLNCKADGYPEP---RIEWYKDGSL-------V-SAEI-------GSHRILLP-----AGSLFFLSLVHG 196 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~P~p---~i~W~~~g~~-------l-~~~~-------~~~~~~~~-----~~~l~~~~vi~~ 196 (238)
.+.+.+|+++.|.|.+.+.+.+ .+.|++.... + .... ..+..... ...|. |..
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~----I~~ 78 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLI----IKN 78 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEE----ECS
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEE----Ecc
Confidence 4678899999999998776543 4999986421 1 1110 11111111 12343 677
Q ss_pred CCCCCCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 197 KKDTDSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
++.+|+|.|.|.+.|..+... ..+.|.|.
T Consensus 79 v~~~D~G~Y~C~v~~~~~~~~-~~~~l~V~ 107 (109)
T 2oyp_A 79 VTLDDHGTYCCRIQFPGLMND-KKLELKLD 107 (109)
T ss_dssp CCGGGCEEEEEEECCSSTTCC-EEEEEEEE
T ss_pred CCChhCeEEEEEEEcCCcccc-eEEEEEEE
Confidence 799999999999999876664 36666664
No 437
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.76 E-value=5.5e-08 Score=77.16 Aligned_cols=94 Identities=20% Similarity=0.259 Sum_probs=61.4
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--E---Eeecc---------CCccEEE--ecCCcEEEEEeec
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--S---LVSAE---------IGSHRIL--LPAGSLFFLSLVH 195 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~---~l~~~---------~~~~~~~--~~~~~l~~~~vi~ 195 (238)
..+...|..+.+.+|+++.|.|.+.+.|.|.+.|++.. . .+... ....... ...+.. .+.|.
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~--sL~I~ 81 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSF--HLRKA 81 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEE--EEEES
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEE--EEEEC
Confidence 34666677889999999999999999999999999832 1 11100 0011111 111221 22378
Q ss_pred CCCCCCCeEEEEEEEeCCCce---eEEEEEEEEcc
Q psy18191 196 GKKDTDSGVYWCVARNELGFA---RSKNATLDVAG 227 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~~---~s~~~~L~V~~ 227 (238)
.++.+|+|.|.|.|.|..|.. ....+.|.|..
T Consensus 82 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 82 SVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp SCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred CCCcccCEEEEEEEecCCCccceEECCCeEEEEeC
Confidence 889999999999999987532 11245677765
No 438
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.75 E-value=4.3e-08 Score=77.11 Aligned_cols=88 Identities=15% Similarity=0.368 Sum_probs=56.7
Q ss_pred CceEEeCCCcEEEEEEEeeeC--CCEEEEEeCC--EEee---------------ccCCccEEEec---CCcEEEEEeecC
Q psy18191 139 ASAVVPRHEPTTLNCKADGYP--EPRIEWYKDG--SLVS---------------AEIGSHRILLP---AGSLFFLSLVHG 196 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g--~~l~---------------~~~~~~~~~~~---~~~l~~~~vi~~ 196 (238)
..+.+.+|+++.|.|.+.|.| .+.+.|+++. ..+. .....+..... .+... +.|..
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~--L~I~~ 87 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLY--LQMNS 87 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEE--EEECS
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEE--EEECc
Confidence 458899999999999999987 6889999842 1110 00011222111 12222 23788
Q ss_pred CCCCCCeEEEEEEEeCCCce-eEEEEEEEEccC
Q psy18191 197 KKDTDSGVYWCVARNELGFA-RSKNATLDVAGK 228 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~~-~s~~~~L~V~~~ 228 (238)
++.+|+|.|.|.|.|..+.. ....+.|.|...
T Consensus 88 v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~ 120 (247)
T 2ghw_B 88 LRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSG 120 (247)
T ss_dssp CCGGGCEEEEEEEEETTEEEEECCCEEEEECSC
T ss_pred CCHHHCEEEEEeeeccCCccccCCceEEEEecc
Confidence 89999999999999984332 112457888765
No 439
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.74 E-value=1.6e-07 Score=64.94 Aligned_cols=89 Identities=11% Similarity=0.134 Sum_probs=57.9
Q ss_pred CCceEEeCCCcEEEEEEEeeeCC-CEEEEEeCCE-----EeeccC-------CccEEEe---cCCcEEEEEeecCCCCCC
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPE-PRIEWYKDGS-----LVSAEI-------GSHRILL---PAGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~-p~i~W~~~g~-----~l~~~~-------~~~~~~~---~~~~l~~~~vi~~v~~~d 201 (238)
|..+.+.+|+++.|.|...+.+. ..+.|++... .+.... .++.... ..+... +.|..++.+|
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~s--L~I~~~~~~D 85 (113)
T 1zox_A 8 PEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFT--VTMEDLRMSD 85 (113)
T ss_dssp CSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEE--EEECSCCGGG
T ss_pred CCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEE--EEEccCCHHH
Confidence 45678899999999999876543 4699998642 121110 0111111 122222 2378889999
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEEccCC
Q psy18191 202 SGVYWCVARNELGFARSKNATLDVAGKI 229 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V~~~~ 229 (238)
+|.|.|.+.+...... ..+.|.|...|
T Consensus 86 sG~Y~C~v~~~~~~~~-~~v~L~V~~~p 112 (113)
T 1zox_A 86 AGIYWCGITKGGLDPM-FKVTVNIGPVP 112 (113)
T ss_dssp CEEEEEEECCSSSCCE-EEEEEEEECC-
T ss_pred CEEEEEeeEcCCCCcc-EEEEEEEEcCC
Confidence 9999999998754443 68899997654
No 440
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.74 E-value=7.6e-08 Score=66.86 Aligned_cols=78 Identities=21% Similarity=0.310 Sum_probs=51.0
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCC------CEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEEEee
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPE------PRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFLSLV 194 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~------p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~~vi 194 (238)
+...|..+.+.+|+++.|.|.+.+.+. +.+.|++.. . .+... ...+.... ..+... +.|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~--L~I 81 (114)
T 1eeq_A 4 LTQSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFT--LTI 81 (114)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEE
T ss_pred eEecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEE--EEE
Confidence 344566788999999999999987763 679999853 1 12110 01111111 122222 237
Q ss_pred cCCCCCCCeEEEEEEEeCC
Q psy18191 195 HGKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 195 ~~v~~~d~G~Y~C~a~N~~ 213 (238)
..++.+|+|.|.|.+.|..
T Consensus 82 ~~v~~~DsG~Y~C~~~~~~ 100 (114)
T 1eeq_A 82 SSLQAEDVAVYYCQQYYSH 100 (114)
T ss_dssp SSCCGGGCEEEEEEECSSS
T ss_pred CCCCcccCEEEEEEEeeCC
Confidence 8889999999999999853
No 441
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=98.74 E-value=1.8e-07 Score=70.76 Aligned_cols=81 Identities=19% Similarity=0.288 Sum_probs=52.9
Q ss_pred CccCC-EEEeCCCceEEeCCCcEEEEEEEeee-CCC--EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCe
Q psy18191 128 GYRVP-RITEHPASAVVPRHEPTTLNCKADGY-PEP--RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 128 v~~~P-~i~~~~~~~~~~~G~~~~L~C~~~g~-P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G 203 (238)
+..+| .+...+....+.+|+.++|.|.+.|. |.+ .|+|++++..+.... .........+. +. +..+|.|
T Consensus 82 V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~----~~~~~~~~tl~--~~-~~reD~g 154 (185)
T 1iam_A 82 VYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREP----AVGEPAEVTTT--VL-VRRDHHG 154 (185)
T ss_dssp EEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE----CCTTTEEEEEE--EE-CCSSCSS
T ss_pred EeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccccc----CCCccccEEEE--Ee-ceeccCC
Confidence 44444 34455555678999999999999885 543 489999999886421 01112222222 22 3666766
Q ss_pred -EEEEEEEeCCCc
Q psy18191 204 -VYWCVARNELGF 215 (238)
Q Consensus 204 -~Y~C~a~N~~G~ 215 (238)
.|+|.|.|.++.
T Consensus 155 ~~~sC~A~~~l~~ 167 (185)
T 1iam_A 155 AQFSCRTELDLRP 167 (185)
T ss_dssp CEEEEEEEEECGG
T ss_pred CeEEEEEEecCcc
Confidence 999999999873
No 442
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.74 E-value=2.5e-08 Score=79.28 Aligned_cols=92 Identities=23% Similarity=0.307 Sum_probs=57.7
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEe---eeCCCEEEEEeCCEEeecc-------CC--------ccEEEec------CC
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKAD---GYPEPRIEWYKDGSLVSAE-------IG--------SHRILLP------AG 186 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~---g~P~p~i~W~~~g~~l~~~-------~~--------~~~~~~~------~~ 186 (238)
.+.+...+..+.+.+|+++.|.|.+. +.|.+.+.|++++...... .. ..+..+. ++
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 44566667778899999999999987 7788899999965321100 00 0111111 14
Q ss_pred cEEEEEeecCCCCCCCeEEEEEEEeCCCce-eEEEEEEEEc
Q psy18191 187 SLFFLSLVHGKKDTDSGVYWCVARNELGFA-RSKNATLDVA 226 (238)
Q Consensus 187 ~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~-~s~~~~L~V~ 226 (238)
.|. |..++.+|+|.|+|.|.|..+.. .+..+.|.|.
T Consensus 85 ~L~----I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 85 SLL----LQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp CEE----ECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred EEE----ECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 444 67779999999999999986554 2346667665
No 443
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.74 E-value=4.9e-08 Score=77.53 Aligned_cols=90 Identities=18% Similarity=0.389 Sum_probs=57.3
Q ss_pred CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeC--CE---Eeecc-----------CCccEEEec---CCcEEEEEeecC
Q psy18191 138 PASAVVPRHEPTTLNCKADGYP--EPRIEWYKD--GS---LVSAE-----------IGSHRILLP---AGSLFFLSLVHG 196 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~--g~---~l~~~-----------~~~~~~~~~---~~~l~~~~vi~~ 196 (238)
|....+.+|+++.|.|.+.|.| .|.+.|+++ +. .+... ...+..... .+... +.|..
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~--L~I~~ 84 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVF--LKMNS 84 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEE--EEEES
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEE--EEECC
Confidence 3456789999999999999885 689999985 22 11100 011221111 22222 23777
Q ss_pred CCCCCCeEEEEEEEeCCC-------ce-eEEEEEEEEccCC
Q psy18191 197 KKDTDSGVYWCVARNELG-------FA-RSKNATLDVAGKI 229 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G-------~~-~s~~~~L~V~~~~ 229 (238)
++.+|+|.|.|.|.|..| .. ....+.|.|...+
T Consensus 85 v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~ 125 (257)
T 1f3r_B 85 LQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGG 125 (257)
T ss_dssp CCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSC
T ss_pred CCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCC
Confidence 899999999999999865 11 1124578887653
No 444
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.72 E-value=4.6e-08 Score=67.43 Aligned_cols=85 Identities=20% Similarity=0.221 Sum_probs=57.9
Q ss_pred CCceEEeCCCcEEEEEEE-eeeCCCEEEEEeCC-EEeec---c--------CCccEEEe--cCCcEEEEEeecCCCCCCC
Q psy18191 138 PASAVVPRHEPTTLNCKA-DGYPEPRIEWYKDG-SLVSA---E--------IGSHRILL--PAGSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~-~g~P~p~i~W~~~g-~~l~~---~--------~~~~~~~~--~~~~l~~~~vi~~v~~~d~ 202 (238)
+..+.+.+|++++|.|.. .+.+.+.+.|++.. ..+.. . ....+... ..+.|. |..++.+|+
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~----I~~v~~~Ds 85 (110)
T 2ptt_A 10 IPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALH----ISNVRKEDK 85 (110)
T ss_dssp CCSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEE----ESSCCGGGC
T ss_pred CCCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEE----ECCCCcccC
Confidence 345788999999999998 77788899999842 22210 0 00112222 234454 677799999
Q ss_pred eEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 203 GVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 203 G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
|.|.|.+.+.. ... ..+.|.|..+
T Consensus 86 G~Y~C~v~~~~-~~~-~~~~L~V~dp 109 (110)
T 2ptt_A 86 GTYYMRVLRET-ENE-LKITLEVFDP 109 (110)
T ss_dssp EEEEEEEESSS-BCC-EEEEEEEECC
T ss_pred eEEEEEEEcCC-CcE-EEEEEEEEcc
Confidence 99999998876 333 4788888653
No 445
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.72 E-value=7.2e-09 Score=79.73 Aligned_cols=82 Identities=10% Similarity=0.033 Sum_probs=53.5
Q ss_pred EeCCCceE-EeCCCcEEEEEEEeeeC---C-CEEEEEeCCEEeeccCCccEEEecCCcEE--EEEeecCCCCCCCeEEEE
Q psy18191 135 TEHPASAV-VPRHEPTTLNCKADGYP---E-PRIEWYKDGSLVSAEIGSHRILLPAGSLF--FLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 135 ~~~~~~~~-~~~G~~~~L~C~~~g~P---~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l~--~~~vi~~v~~~d~G~Y~C 207 (238)
+..|.... +.+|+++.|.|.+.|.| . +.+.|++++..+............++... ..+.|..+..+|+|.|+|
T Consensus 6 ~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 85 (207)
T 2vol_A 6 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKC 85 (207)
T ss_dssp EECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEE
T ss_pred EeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEE
Confidence 33444444 78999999999999885 2 48999999977642100000011222211 122356668899999999
Q ss_pred EEEeCCCce
Q psy18191 208 VARNELGFA 216 (238)
Q Consensus 208 ~a~N~~G~~ 216 (238)
.|.|..|..
T Consensus 86 ~a~~~~~~~ 94 (207)
T 2vol_A 86 RVNSAAFPA 94 (207)
T ss_dssp EEECTTCSS
T ss_pred EEEccCCCC
Confidence 999998864
No 446
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.72 E-value=7e-08 Score=76.45 Aligned_cols=98 Identities=13% Similarity=0.249 Sum_probs=62.6
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEee--eCCCEEEEEeCC--E---Eeecc------------CCccEEEe--cCCcE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADG--YPEPRIEWYKDG--S---LVSAE------------IGSHRILL--PAGSL 188 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g--~P~p~i~W~~~g--~---~l~~~------------~~~~~~~~--~~~~l 188 (238)
.+|.+...+..+.+.+|+++.|.|.+.+ .|.+.+.|++.. . .+... ...+.... ..+..
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 4566777788899999999999999988 367899999732 1 11100 01111111 11111
Q ss_pred EEEEeecCCCCCCCeEEEEEEEeC------------CCceeEEEEEEEEccCC
Q psy18191 189 FFLSLVHGKKDTDSGVYWCVARNE------------LGFARSKNATLDVAGKI 229 (238)
Q Consensus 189 ~~~~vi~~v~~~d~G~Y~C~a~N~------------~G~~~s~~~~L~V~~~~ 229 (238)
..+.|..++.+|+|.|.|.|.|. .+... ..+.|.|...+
T Consensus 85 -~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~-~~~~l~V~~~~ 135 (256)
T 3juy_B 85 -AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWG-KGTTVIVSSGG 135 (256)
T ss_dssp -EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEEC-CCEEEEECSCC
T ss_pred -EEEEECCCCcccCEEEEEeEEeccccccccccccceeEEC-CceEEeecCCc
Confidence 12337888999999999999997 33332 36678887653
No 447
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=98.72 E-value=9.2e-08 Score=65.71 Aligned_cols=98 Identities=13% Similarity=0.144 Sum_probs=64.1
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEE
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWC 207 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C 207 (238)
...+|.+...|.. .+..|+.++|.|..... ...+.|+|+|..+........... .........|..++.+|+|.|.|
T Consensus 6 ~~pkPsL~a~P~~-vv~~G~~VtL~C~~~~~-~~~f~l~k~g~~~~~~~~~~~~~~-~~~~~~~f~i~~vt~~~aG~Y~C 82 (106)
T 3kgr_A 6 DLPRPSISAEPGT-VIPLGSHVTFVCRGPVG-VQTFRLERESRSTYNDTEDVSQAS-PSESEARFRIDSVSEGNAGPYRC 82 (106)
T ss_dssp CCCCCEEEEESCS-EEETTCCEEEEEEECTT-CCEEEEEEGGGTEEEEECCCEEEE-TTEEEEEEEESSCCGGGCEEEEE
T ss_pred CCCCCEEEEeCCC-ccCCCCeEEEEEEccCC-CcEEEEEECCCccccccccccccC-CCCcceEEEecCCCcCCCceEEE
Confidence 3467888877665 77899999999997543 357999999865421001111111 11111122367789999999999
Q ss_pred EEEeCCC-ceeEEEEEEEEccC
Q psy18191 208 VARNELG-FARSKNATLDVAGK 228 (238)
Q Consensus 208 ~a~N~~G-~~~s~~~~L~V~~~ 228 (238)
...|..+ +..|+.+.|.|.+.
T Consensus 83 ~~~~~~~~S~~Sdpl~L~Vtg~ 104 (106)
T 3kgr_A 83 IYYKPPKWSEQSDYLELLVKEA 104 (106)
T ss_dssp EEEETTEECCCCCCEEEEEECC
T ss_pred EeeCCCcccCCCCCEEEEEeCC
Confidence 9998653 34467888888753
No 448
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.71 E-value=6.5e-08 Score=66.85 Aligned_cols=77 Identities=22% Similarity=0.371 Sum_probs=50.4
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeC----CCEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEEEeecC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYP----EPRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFLSLVHG 196 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P----~p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~~vi~~ 196 (238)
+...|..+.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+... ...+.... ..+... +.|..
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~--L~I~~ 81 (111)
T 1j05_L 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFT--LIIDP 81 (111)
T ss_dssp EEEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEE--EEESS
T ss_pred EEEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEE--EEECC
Confidence 34446678889999999999998776 4779999852 2 12110 01111111 122222 23788
Q ss_pred CCCCCCeEEEEEEEeC
Q psy18191 197 KKDTDSGVYWCVARNE 212 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~ 212 (238)
++.+|+|.|.|.+.|.
T Consensus 82 v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 82 VEADDVATYYCQQTNE 97 (111)
T ss_dssp CCGGGCEEEEEEECSS
T ss_pred CCcccCEEEEEEEecC
Confidence 8999999999999885
No 449
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.71 E-value=1.2e-07 Score=74.35 Aligned_cols=94 Identities=20% Similarity=0.331 Sum_probs=58.2
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEe--------------CCEEeeccCC--ccEEEecCCcEEEEEeec
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYK--------------DGSLVSAEIG--SHRILLPAGSLFFLSLVH 195 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~--------------~g~~l~~~~~--~~~~~~~~~~l~~~~vi~ 195 (238)
+.++..|..+.+.+|+++.|.| ..+.|.+.+.|+| ++..+..... .+......+.-...+.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 3455566778899999999999 7788899999998 2222211110 222222111111122378
Q ss_pred CCCCCCCeEEEEEEEeCC----CceeEEEEEEEEcc
Q psy18191 196 GKKDTDSGVYWCVARNEL----GFARSKNATLDVAG 227 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~----G~~~s~~~~L~V~~ 227 (238)
.++.+|+|.|.|.+.+.. +.. ...+.|.|..
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~-~~~~~l~V~~ 116 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFF-GPGTRLTVLE 116 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEE-CCCEEEEEES
T ss_pred CCCHhHCEEEEEEEccCCCcceEEE-cCCcEEEEec
Confidence 889999999999999632 222 2355677764
No 450
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.70 E-value=4.1e-08 Score=69.66 Aligned_cols=96 Identities=22% Similarity=0.335 Sum_probs=57.2
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeee-CCCEEEEEeCCE----EeeccCC---ccEEEe--------cCCcEEEEEeecCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGY-PEPRIEWYKDGS----LVSAEIG---SHRILL--------PAGSLFFLSLVHGK 197 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~-P~p~i~W~~~g~----~l~~~~~---~~~~~~--------~~~~l~~~~vi~~v 197 (238)
+...|..+.+.+|++++|.|.+.+. |.+.+.|++++. .+..... .+.... ....|. |..+
T Consensus 6 v~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~----I~~v 81 (127)
T 2jju_A 6 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSIS----ISNI 81 (127)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEE----ECSC
T ss_pred EEeeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEE----ECCC
Confidence 3444567889999999999999765 678899999752 1211100 111110 012333 6777
Q ss_pred CCCCCeEEEEEEEeCCCc--e---eEEEEEEEEccCCCCCC
Q psy18191 198 KDTDSGVYWCVARNELGF--A---RSKNATLDVAGKISTAT 233 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G~--~---~s~~~~L~V~~~~~~~~ 233 (238)
+.+|+|.|.|.+.|..+. . ...-..|.|.+....|.
T Consensus 82 ~~~DsG~Y~C~~~~~~~~~~~~~~fg~GT~L~V~~~~~~~~ 122 (127)
T 2jju_A 82 TPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSTRH 122 (127)
T ss_dssp CGGGCEEEEEEEEECCSSSCEEEEECCCEEEEEEC------
T ss_pred CHHHCEEEEEEEEcCCCCccceEEeCCCeEEEEeecCCCcc
Confidence 999999999999986321 1 11135788877666554
No 451
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.70 E-value=5.5e-08 Score=67.60 Aligned_cols=78 Identities=21% Similarity=0.321 Sum_probs=50.9
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCC--EE---eeccCCccEE-EecCCcEEEEEeecCCCCCCCeEE
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYP--EPRIEWYKDG--SL---VSAEIGSHRI-LLPAGSLFFLSLVHGKKDTDSGVY 205 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g--~~---l~~~~~~~~~-~~~~~~l~~~~vi~~v~~~d~G~Y 205 (238)
+...|..+.+.+|++++|.|.+.+.+ .+.+.|+++. .. +... ..+.. ..........+.|..++.+|+|.|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~-~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y 81 (113)
T 1sq2_N 3 VDQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISK-GGRYVETVNSGSKSFSLRINDLTVEDGGTY 81 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCC-BTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred eEeCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEe-CCCEEEEEeCCCCEEEEEECCCChhhCEEE
Confidence 34456778899999999999998765 5789999852 21 1111 12221 111111122233788899999999
Q ss_pred EEEEEeC
Q psy18191 206 WCVARNE 212 (238)
Q Consensus 206 ~C~a~N~ 212 (238)
.|.+.|.
T Consensus 82 ~C~~~~~ 88 (113)
T 1sq2_N 82 RCGLGVA 88 (113)
T ss_dssp EEEECBT
T ss_pred EEEEEeC
Confidence 9999983
No 452
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.70 E-value=4.5e-08 Score=76.54 Aligned_cols=76 Identities=18% Similarity=0.313 Sum_probs=47.1
Q ss_pred CCceEEeCCCcEEEEEEEeee-CC-CEEEEEe-CCEEeeccCCccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeC
Q psy18191 138 PASAVVPRHEPTTLNCKADGY-PE-PRIEWYK-DGSLVSAEIGSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~-P~-p~i~W~~-~g~~l~~~~~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
|....+..|+.+.|.|.+.|. |. +.+.|++ +|..+....... ....++.... ...|..+.. | |.|+|.+.|.
T Consensus 137 p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~-~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~ 213 (230)
T 1ypz_F 137 PSVAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGD-TLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHE 213 (230)
T ss_dssp CCHHHHHHHSCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECC-CEEETTEEEEEEEEEECGGGT-T-SCEEEEEECS
T ss_pred CCchhhccCCcceEEEEEeeecCCCeEEEEEccCCeEccccccce-eecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEEC
Confidence 344445568999999999887 75 5999999 887664211111 1123443322 122333333 4 9999999998
Q ss_pred CCce
Q psy18191 213 LGFA 216 (238)
Q Consensus 213 ~G~~ 216 (238)
.+..
T Consensus 214 ~~~~ 217 (230)
T 1ypz_F 214 NNKG 217 (230)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 8754
No 453
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.70 E-value=2.3e-08 Score=79.92 Aligned_cols=97 Identities=13% Similarity=0.287 Sum_probs=60.8
Q ss_pred cCCEEEeCCCceEEeCCCcEEEEEEEeeeC-----CCEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEE
Q psy18191 130 RVPRITEHPASAVVPRHEPTTLNCKADGYP-----EPRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFL 191 (238)
Q Consensus 130 ~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P-----~p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~ 191 (238)
..+.+...|..+.+.+|+++.|.|.+.+.| .+.+.|+++. . .+... ...+.... .++...
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~-- 91 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFT-- 91 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE--
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEE--
Confidence 445666667778899999999999998887 4889999853 2 11110 01111111 122222
Q ss_pred EeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEccC
Q psy18191 192 SLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGK 228 (238)
Q Consensus 192 ~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~ 228 (238)
+.|..++.+|+|.|.|.+.|..+......+.|.|...
T Consensus 92 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 128 (268)
T 1x9q_A 92 LKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSS 128 (268)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEC----
T ss_pred EEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccC
Confidence 2378889999999999999986543223456777654
No 454
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.69 E-value=6.8e-08 Score=68.35 Aligned_cols=83 Identities=22% Similarity=0.244 Sum_probs=55.0
Q ss_pred CCceEEeCCCcEEEEEEEeeeCCC----EEEEEeCC----------------EEeecc-CCccEEE-ecCC---------
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPEP----RIEWYKDG----------------SLVSAE-IGSHRIL-LPAG--------- 186 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~p----~i~W~~~g----------------~~l~~~-~~~~~~~-~~~~--------- 186 (238)
|..+.+.+|+++.|.|...+.+.+ .+.|+++. ..+... ....+.. ..++
T Consensus 9 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~ 88 (128)
T 3r0n_A 9 LPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEA 88 (128)
T ss_dssp CSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCC
T ss_pred CCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEecccccccccccc
Confidence 456778899999999999887666 79999962 111110 0111222 2221
Q ss_pred -----cEEEEEeecCCCCCCCeEEEEEEEe-CCCceeEEEEEEEE
Q psy18191 187 -----SLFFLSLVHGKKDTDSGVYWCVARN-ELGFARSKNATLDV 225 (238)
Q Consensus 187 -----~l~~~~vi~~v~~~d~G~Y~C~a~N-~~G~~~s~~~~L~V 225 (238)
.|. |.+++.+|+|.|.|.+.+ ..|... ..+.|.|
T Consensus 89 ~~~~~sL~----I~~v~~~D~G~Y~C~v~~~~~g~~~-~~~~L~V 128 (128)
T 3r0n_A 89 ELQDATLA----LHGLTVEDEGNYTCEFATFPKGSVR-GMTWLRV 128 (128)
T ss_dssp BCSBCCEE----ECSCCGGGCEEEEEEEEEETTEEEE-EEEEEEC
T ss_pred CCCCeEEE----EccCCchhCeEEEEEEEeCCCCCcc-cEEEEEC
Confidence 444 677799999999997655 667775 5777765
No 455
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.69 E-value=9.8e-08 Score=75.85 Aligned_cols=90 Identities=23% Similarity=0.419 Sum_probs=58.2
Q ss_pred CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeC--CEEee---cc------------CCccEEEec---CCcEEEEEeec
Q psy18191 138 PASAVVPRHEPTTLNCKADGYP--EPRIEWYKD--GSLVS---AE------------IGSHRILLP---AGSLFFLSLVH 195 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~--g~~l~---~~------------~~~~~~~~~---~~~l~~~~vi~ 195 (238)
|..+.+.+|+++.|.|.+.|.| .+.+.|+++ +..+. .. ...+..... .+... +.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~--L~I~ 84 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAY--MQLS 84 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEE--EEEC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEE--EEEC
Confidence 5568899999999999998875 689999984 22221 00 011221111 12222 2378
Q ss_pred CCCCCCCeEEEEEEEeCCCc----eeEEEEEEEEccCC
Q psy18191 196 GKKDTDSGVYWCVARNELGF----ARSKNATLDVAGKI 229 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G~----~~s~~~~L~V~~~~ 229 (238)
.++.+|+|.|.|.|.|..|. .....+.|.|..++
T Consensus 85 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~ 122 (256)
T 1nqb_A 85 SLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDI 122 (256)
T ss_dssp SCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCC
T ss_pred cCChhhCEEEEEEEeeccCccceeEEcCceeeeecccc
Confidence 88999999999999999773 11124677776544
No 456
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.69 E-value=7.1e-08 Score=75.55 Aligned_cols=92 Identities=13% Similarity=0.156 Sum_probs=56.2
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--------------CEEeeccC-CccEEEec--CCcEEEEEeec
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--------------GSLVSAEI-GSHRILLP--AGSLFFLSLVH 195 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--------------g~~l~~~~-~~~~~~~~--~~~l~~~~vi~ 195 (238)
.+...|..+.+.+|+++.|.|.+.+ |.+.+.|+|. +....... ..+..... .+... +.|.
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s--L~I~ 80 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSE--MNMS 80 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEE--EEEC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEE--EEEC
Confidence 3445567788999999999999876 8889999982 11111110 11222221 12222 2378
Q ss_pred CCCCCCCeEEEEEEEeC--CCceeEEEEEEEEcc
Q psy18191 196 GKKDTDSGVYWCVARNE--LGFARSKNATLDVAG 227 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~--~G~~~s~~~~L~V~~ 227 (238)
.++.+|+|.|.|.+.+. ........+.|.|..
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 114 (240)
T 3q5y_A 81 ALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLE 114 (240)
T ss_dssp SCCGGGCEEEEEEEESSTTBCCEECCCEEEEEES
T ss_pred cCChhHCEEEEEEEccCCCcceEEcCCEEEEEec
Confidence 88999999999999832 212212345677754
No 457
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.69 E-value=1.3e-07 Score=76.19 Aligned_cols=93 Identities=15% Similarity=0.342 Sum_probs=58.3
Q ss_pred eCCCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCC--EEe---ec------------cCCccEEEec--CCcEEEEEee
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGYP--EPRIEWYKDG--SLV---SA------------EIGSHRILLP--AGSLFFLSLV 194 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g--~~l---~~------------~~~~~~~~~~--~~~l~~~~vi 194 (238)
..|..+.+.+|+++.|.|.+.|.| .+.+.|++++ ..+ .. ....+..... .+.. ..+.|
T Consensus 31 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~-~sL~I 109 (282)
T 1qok_A 31 QQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNT-AYLQL 109 (282)
T ss_dssp EECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTE-EEEEE
T ss_pred ECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCe-EEEEE
Confidence 346678899999999999998875 6899999853 111 10 0011111111 1111 12237
Q ss_pred cCCCCCCCeEEEEEEEeCCCc---e-eEEEEEEEEccCC
Q psy18191 195 HGKKDTDSGVYWCVARNELGF---A-RSKNATLDVAGKI 229 (238)
Q Consensus 195 ~~v~~~d~G~Y~C~a~N~~G~---~-~s~~~~L~V~~~~ 229 (238)
..++.+|+|.|.|.+.|..|. . ....+.|.|...+
T Consensus 110 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~ 148 (282)
T 1qok_A 110 SSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGG 148 (282)
T ss_dssp CSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC--
T ss_pred CcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCC
Confidence 888999999999999999872 1 1124578887654
No 458
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.69 E-value=1.6e-07 Score=68.11 Aligned_cols=96 Identities=18% Similarity=0.336 Sum_probs=57.8
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC-----EEeecc-------CCccEEE-ecCCcEEEEEeecCCCCC
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG-----SLVSAE-------IGSHRIL-LPAGSLFFLSLVHGKKDT 200 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g-----~~l~~~-------~~~~~~~-~~~~~l~~~~vi~~v~~~ 200 (238)
++..|..+.+.+|++++|.|.+.+.+.+.+.|++.. ..+... ...+... ....... +.|..++.+
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~s--L~I~~l~~~ 80 (143)
T 3u6r_L 3 LTQSPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFT--LTISNLEPE 80 (143)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEECSCCGG
T ss_pred EEECCCEEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEE--EEEccCccc
Confidence 445566788999999999999987777789999842 222111 0111111 1222222 337888999
Q ss_pred CCeEEEEEEEeCCCceeEEEEEEEEccCCCCC
Q psy18191 201 DSGVYWCVARNELGFARSKNATLDVAGKISTA 232 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~ 232 (238)
|+|.|.|.+.+.. .....-..|.|.+....|
T Consensus 81 DsG~Y~C~~~~~~-~~fg~gt~L~V~~~~~~p 111 (143)
T 3u6r_L 81 DFAVYYCQQRSDW-VTFGGGTKVEIKAAADDD 111 (143)
T ss_dssp GCEEEEEEECSSB-CEECCCEEEEEC------
T ss_pred CCEEEEEEEecCC-CEECCCEEEEECCCCCCC
Confidence 9999999998764 221224577776654333
No 459
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.68 E-value=1.6e-08 Score=75.97 Aligned_cols=72 Identities=17% Similarity=0.240 Sum_probs=51.1
Q ss_pred ceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeecc--C---------CccEEEe-----cCCc--EEEEEeecCCCCCC
Q psy18191 140 SAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAE--I---------GSHRILL-----PAGS--LFFLSLVHGKKDTD 201 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~--~---------~~~~~~~-----~~~~--l~~~~vi~~v~~~d 201 (238)
.+.+.+|+++.|.|.+.+.|.+.+.|++++..+... . ...+... .++. |. |..++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~----i~~v~~~D 79 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLI----IKNLKIED 79 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEE----ECSCCGGG
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEE----EecCCHHH
Confidence 467889999999999999999999999998632110 0 0111111 2223 44 66779999
Q ss_pred CeEEEEEEEeCCCc
Q psy18191 202 SGVYWCVARNELGF 215 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~ 215 (238)
+|.|+|.+.|..|.
T Consensus 80 ~G~Y~C~~~~~~~~ 93 (184)
T 2ny1_B 80 SDTYICEVEDQKEE 93 (184)
T ss_dssp CEEEEEEETTEEEE
T ss_pred CEEEEEEEEcCCCc
Confidence 99999999988653
No 460
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.68 E-value=5e-08 Score=77.19 Aligned_cols=93 Identities=16% Similarity=0.263 Sum_probs=59.4
Q ss_pred EeCCCceEEeCCCcEEEEEEEeeeC--CCEEEEEeC--CEEee---------------ccCCccEEEe-cCCcEEEEEee
Q psy18191 135 TEHPASAVVPRHEPTTLNCKADGYP--EPRIEWYKD--GSLVS---------------AEIGSHRILL-PAGSLFFLSLV 194 (238)
Q Consensus 135 ~~~~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~--g~~l~---------------~~~~~~~~~~-~~~~l~~~~vi 194 (238)
+..|..+.+.+|+++.|.|.+.|.+ .+.+.|++. +..+. .....+.... ....-...+.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 3445678899999999999998854 789999982 21110 0001111111 11111111237
Q ss_pred cCCCCCCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 195 HGKKDTDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 195 ~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
..++.+|+|.|.|.|.|..+......+.|.|..
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~ 117 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSA 117 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECS
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEec
Confidence 888999999999999997766533466788875
No 461
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=98.67 E-value=3.3e-07 Score=62.51 Aligned_cols=89 Identities=19% Similarity=0.182 Sum_probs=61.1
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCC----CEEEEEeCCEEeeccCCccEEEe-cCCcEEEEEeecCCCCCCCe
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPE----PRIEWYKDGSLVSAEIGSHRILL-PAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~----p~i~W~~~g~~l~~~~~~~~~~~-~~~~l~~~~vi~~v~~~d~G 203 (238)
..+|.+...|. ..+..|+.++|.| ... .. -.+.|+|+|..... .... ....-.+ .|..++..|+|
T Consensus 7 lpkPsL~a~p~-~~v~~G~~VTL~C-~~~-~~~~~~~~f~l~k~g~~~~~-----~~~~~~~~~a~f--~i~~vt~~~aG 76 (102)
T 4esk_A 7 LPDITIFPNSS-LMISQGTFVTVVC-SYS-DKHDLYNMVRLEKDGSTFME-----KSTEPYKTEDEF--EIGPVNETITG 76 (102)
T ss_dssp CCEEEEECCSE-EEEETTCCEEEEE-ECT-TTGGGCCEEEEEETTEEEEE-----EECCSSCSEEEE--EECSCCGGGCE
T ss_pred CCCCEEEEeCC-CcccCCCcEEEEE-CCC-cCCCcccEEEEEECCccccc-----cccCCCCcceEE--EeCcCCcccCe
Confidence 35677766654 5678999999999 632 33 57999999975431 1111 1122222 26778999999
Q ss_pred EEEEEEEeCCC-ceeEEEEEEEEcc
Q psy18191 204 VYWCVARNELG-FARSKNATLDVAG 227 (238)
Q Consensus 204 ~Y~C~a~N~~G-~~~s~~~~L~V~~ 227 (238)
.|.|...+..+ +..|+.+.|.|.+
T Consensus 77 ~Y~C~~~~~~~~S~~Sdpl~L~VtG 101 (102)
T 4esk_A 77 HYSCIYSKGITWSERSKTLELKVIK 101 (102)
T ss_dssp EEEEEEEETTTEEEECCCEEEEEEC
T ss_pred eEEEEEeCCCccccCcCCEEEEEEe
Confidence 99999999876 4456788888865
No 462
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.67 E-value=7.1e-08 Score=66.49 Aligned_cols=85 Identities=13% Similarity=0.241 Sum_probs=53.0
Q ss_pred CceEEeCCCcEEEEEEEeeeC-CCEEEEEeCCE--E---eec-cC-----CccEEEe---cCCcEEEEEeecCCCCCCCe
Q psy18191 139 ASAVVPRHEPTTLNCKADGYP-EPRIEWYKDGS--L---VSA-EI-----GSHRILL---PAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P-~p~i~W~~~g~--~---l~~-~~-----~~~~~~~---~~~~l~~~~vi~~v~~~d~G 203 (238)
..+.+.+|++++|.|...+.. .+.+.|++... . +.. .. .++.... ..+... +.|..++.+|+|
T Consensus 4 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~--L~I~~~~~~DsG 81 (110)
T 2q87_A 4 RTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFT--VTLENLTEEDAG 81 (110)
T ss_dssp EEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEE--EEESSCCGGGCE
T ss_pred cEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEE--EEEccCCHHHCE
Confidence 457789999999999986654 47899998642 1 110 00 0111111 122222 337888999999
Q ss_pred EEEEEEEeCC-C--ceeEEEEEEEE
Q psy18191 204 VYWCVARNEL-G--FARSKNATLDV 225 (238)
Q Consensus 204 ~Y~C~a~N~~-G--~~~s~~~~L~V 225 (238)
.|.|.+.+.. | ......+.|.|
T Consensus 82 ~Y~C~~~~~~~g~~~~~~~~v~v~V 106 (110)
T 2q87_A 82 TYWCGVDTPWLQDFHDPVVEVEVSV 106 (110)
T ss_dssp EEEEEEECTTSCCBCCCSEEEEEEE
T ss_pred EEEEEEecCccCccCCccEEEEEEE
Confidence 9999999986 5 33223555555
No 463
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.67 E-value=6.9e-08 Score=66.52 Aligned_cols=74 Identities=19% Similarity=0.324 Sum_probs=48.4
Q ss_pred CCceEEeCCCcEEEEEE-EeeeC-CCEEEEEeCCEEe---ecc-------CCccEEEe--cCCcEEEEEeecCCCCCCCe
Q psy18191 138 PASAVVPRHEPTTLNCK-ADGYP-EPRIEWYKDGSLV---SAE-------IGSHRILL--PAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~-~~g~P-~p~i~W~~~g~~l---~~~-------~~~~~~~~--~~~~l~~~~vi~~v~~~d~G 203 (238)
|..+.+.+|++++|.|. +.+.+ .+.+.|++....+ ... ...+.... ..+. ...+.|..++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~-~~~L~I~~v~~~DsG 85 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSN-SASLTISGLKTEDEA 85 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTT-EEEEEECSCCGGGCE
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCC-EEEEEECCCChhhCE
Confidence 56788999999999999 77665 4789999876211 110 01122211 1221 122337888999999
Q ss_pred EEEEEEEeC
Q psy18191 204 VYWCVARNE 212 (238)
Q Consensus 204 ~Y~C~a~N~ 212 (238)
.|.|.+.|.
T Consensus 86 ~Y~C~~~~~ 94 (109)
T 1pew_A 86 DYYCQSYDA 94 (109)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEEeC
Confidence 999999985
No 464
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.67 E-value=1.8e-07 Score=74.06 Aligned_cols=95 Identities=13% Similarity=0.230 Sum_probs=56.5
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeee--CCCEEEEEeCC--E--Eee----c--------cCCccEEEec-CCcEEEEEee
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGY--PEPRIEWYKDG--S--LVS----A--------EIGSHRILLP-AGSLFFLSLV 194 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~g--~--~l~----~--------~~~~~~~~~~-~~~l~~~~vi 194 (238)
.+..|..+.+.+|+++.|.|.+.+. |.+.+.|++.. . .+. . ....+..... .......+.|
T Consensus 11 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 90 (257)
T 3gkz_A 11 QLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQL 90 (257)
T ss_dssp EEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred EEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEE
Confidence 3444667789999999999999884 57899999832 1 111 0 0011111111 1101112237
Q ss_pred cCCCCCCCeEEEEEEEeCCCce---eEEEEEEEEccC
Q psy18191 195 HGKKDTDSGVYWCVARNELGFA---RSKNATLDVAGK 228 (238)
Q Consensus 195 ~~v~~~d~G~Y~C~a~N~~G~~---~s~~~~L~V~~~ 228 (238)
..++.+|+|.|.|.|.|..+.. ....+.|.|..+
T Consensus 91 ~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~ 127 (257)
T 3gkz_A 91 KSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGG 127 (257)
T ss_dssp CSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC--
T ss_pred CCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCc
Confidence 8889999999999999973211 123557777765
No 465
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.66 E-value=2.4e-07 Score=71.46 Aligned_cols=88 Identities=17% Similarity=0.436 Sum_probs=56.5
Q ss_pred CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCC--EE---eec-cC-------------CccEEEe---cCCcEEEEEe
Q psy18191 138 PASAVVPRHEPTTLNCKADGYP--EPRIEWYKDG--SL---VSA-EI-------------GSHRILL---PAGSLFFLSL 193 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g--~~---l~~-~~-------------~~~~~~~---~~~~l~~~~v 193 (238)
|..+.+.+|+++.|.|.+.+.| .+.+.|++++ .. +.. .. ..+.... ..+... +.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~--L~ 84 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVY--LQ 84 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEE--EE
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEE--EE
Confidence 4567889999999999998876 7899999853 21 110 00 1122111 122222 23
Q ss_pred ecCCCCCCCeEEEEEEEeCCCce--eEEEEEEEEcc
Q psy18191 194 VHGKKDTDSGVYWCVARNELGFA--RSKNATLDVAG 227 (238)
Q Consensus 194 i~~v~~~d~G~Y~C~a~N~~G~~--~s~~~~L~V~~ 227 (238)
|..++.+|+|.|.|.+.|..|.. ....+.|.|..
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 120 (220)
T 1pz5_B 85 MNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS 120 (220)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred EccCCHHHCEEEEEEEecCCcccceECCCEEEEEcc
Confidence 78889999999999999986532 11245777763
No 466
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.66 E-value=2.7e-07 Score=63.90 Aligned_cols=78 Identities=17% Similarity=0.341 Sum_probs=50.6
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeC-----CCEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEEEeec
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYP-----EPRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFLSLVH 195 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P-----~p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~~vi~ 195 (238)
+...|..+.+.+|++++|.|.+.+.+ .+.+.|++.. . .+... ...+.... ..+... +.|.
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~--L~I~ 81 (113)
T 1dlf_L 4 MTQTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFT--LKIS 81 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE--EEEC
T ss_pred EEEeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEE--EEEC
Confidence 34446678899999999999997765 4789999842 1 12110 01111111 122222 2378
Q ss_pred CCCCCCCeEEEEEEEeCC
Q psy18191 196 GKKDTDSGVYWCVARNEL 213 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~ 213 (238)
.++.+|+|.|.|.+.|..
T Consensus 82 ~v~~~DsG~Y~C~~~~~~ 99 (113)
T 1dlf_L 82 RVEAEDLGVYFCSQSTHV 99 (113)
T ss_dssp SCCGGGCEEEEEEECSSS
T ss_pred CCChHHCEEEEEEEecCC
Confidence 889999999999998763
No 467
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.66 E-value=8.2e-08 Score=68.39 Aligned_cols=94 Identities=23% Similarity=0.279 Sum_probs=59.9
Q ss_pred eCCCceEEeCCCcEEEEEEEeeeC-CCEEEEEeC--CE---Eeec-cC------CccEEEec--CCcEEEEEeecCCCCC
Q psy18191 136 EHPASAVVPRHEPTTLNCKADGYP-EPRIEWYKD--GS---LVSA-EI------GSHRILLP--AGSLFFLSLVHGKKDT 200 (238)
Q Consensus 136 ~~~~~~~~~~G~~~~L~C~~~g~P-~p~i~W~~~--g~---~l~~-~~------~~~~~~~~--~~~l~~~~vi~~v~~~ 200 (238)
..|..+.+.+|++++|.|...+.+ ...+.|++. +. .+.. .. ...++... .......+.|..++.+
T Consensus 6 Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~ 85 (129)
T 3rrq_A 6 FSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRN 85 (129)
T ss_dssp EECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGG
T ss_pred ECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChh
Confidence 346678899999999999987764 467999973 21 1111 00 01122221 1111222337888999
Q ss_pred CCeEEEEEEEeCCCce---eEEEEEEEEccCC
Q psy18191 201 DSGVYWCVARNELGFA---RSKNATLDVAGKI 229 (238)
Q Consensus 201 d~G~Y~C~a~N~~G~~---~s~~~~L~V~~~~ 229 (238)
|+|.|.|.+.|..+.. .+..+.|.|...+
T Consensus 86 Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~ 117 (129)
T 3rrq_A 86 DSGTYLCGAISLAPKLQIKESLRAELRVTERR 117 (129)
T ss_dssp GCEEEEEEEEECGGGCEEEECCCEEEEEECCC
T ss_pred HCEEEEEEEEecCCCceeeEeceEEEEEecCc
Confidence 9999999999987765 1236788887654
No 468
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.66 E-value=2.3e-08 Score=77.87 Aligned_cols=93 Identities=17% Similarity=0.234 Sum_probs=57.6
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCC-C-EEEEEeCC--EEe---ec-------cCCccEEE-ecCCcEEEEEeecC
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPE-P-RIEWYKDG--SLV---SA-------EIGSHRIL-LPAGSLFFLSLVHG 196 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~-p-~i~W~~~g--~~l---~~-------~~~~~~~~-~~~~~l~~~~vi~~ 196 (238)
+.+.. |..+.+.+|+++.|.|.+.+.+. + .+.|++++ ..+ .. ....+... ...+... ..|..
T Consensus 21 ~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--L~I~~ 97 (234)
T 2j6e_L 21 SVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSAS--LAISG 97 (234)
T ss_dssp CCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEE--EEEES
T ss_pred cEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEE--EEECC
Confidence 33334 66778899999999999988654 4 79999863 221 10 00111111 1122222 23677
Q ss_pred CCCCCCeEEEEEEEeCCCc--eeEEEEEEEEcc
Q psy18191 197 KKDTDSGVYWCVARNELGF--ARSKNATLDVAG 227 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~--~~s~~~~L~V~~ 227 (238)
++.+|+|.|.|.|.|..|. .....+.|.|..
T Consensus 98 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 130 (234)
T 2j6e_L 98 LRSEDEADYYCATWDDSLSAVIFGGGTKLTVLG 130 (234)
T ss_dssp CCSTTCSEEEEEEEETTTTEEEECCCBCCCBCC
T ss_pred CCHHHCEEEEEEEEcCCcceeEecCCEEEEEec
Confidence 7999999999999999882 212245677743
No 469
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.66 E-value=2.6e-07 Score=71.93 Aligned_cols=89 Identities=20% Similarity=0.358 Sum_probs=56.9
Q ss_pred CCCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCC--EEee----cc-----------CCccEEEec---CCcEEEEEee
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYP--EPRIEWYKDG--SLVS----AE-----------IGSHRILLP---AGSLFFLSLV 194 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g--~~l~----~~-----------~~~~~~~~~---~~~l~~~~vi 194 (238)
.|..+.+.+|+++.|.|.+.+.| .+.+.|++++ ..+. .. ...+..... .+... +.|
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s--L~I 83 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAY--MQL 83 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEE--EEE
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEE--EEE
Confidence 35567889999999999999877 6889999853 2111 00 011221111 12222 237
Q ss_pred cCCCCCCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 195 HGKKDTDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 195 ~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
..++.+|+|.|.|.+.|..+......+.|.|..
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~ 116 (227)
T 1mju_H 84 SSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSA 116 (227)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEECCCEEEEECS
T ss_pred CCCCcccCEEEEEEECCCCceEEcCcEEEEEcC
Confidence 888999999999999996432211245777765
No 470
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.65 E-value=6.9e-08 Score=76.38 Aligned_cols=90 Identities=18% Similarity=0.275 Sum_probs=56.3
Q ss_pred CCceEEeCCCcEEEEEEEeee--CCCEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEEEeecCCCCCCC
Q psy18191 138 PASAVVPRHEPTTLNCKADGY--PEPRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFLSLVHGKKDTDS 202 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~~vi~~v~~~d~ 202 (238)
|..+.+.+|+++.|.|.+.+. |.+.+.|+|+. . .+... ...+.... .++.. .+.|..++.+|+
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--~L~I~~v~~~Ds 86 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSA--SLAITGLQSEDE 86 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEE--EEEECSCCGGGC
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEE--EEEECCCChhhC
Confidence 345788999999999999887 78899999842 1 11110 01111111 12221 223788899999
Q ss_pred eEEEEEEEeCCCce--eEEEEEEEEccCC
Q psy18191 203 GVYWCVARNELGFA--RSKNATLDVAGKI 229 (238)
Q Consensus 203 G~Y~C~a~N~~G~~--~s~~~~L~V~~~~ 229 (238)
|.|.|.|.|..|.. ....+.|.|...+
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~ 115 (256)
T 3ux9_B 87 ADYYCQVRDNNENEWVFGGGTKLTVLGSG 115 (256)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEC---
T ss_pred EEEEEEEEECCCCceEECCCEEEEEECCC
Confidence 99999999976532 1135678887654
No 471
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.64 E-value=1.3e-07 Score=66.73 Aligned_cols=86 Identities=19% Similarity=0.280 Sum_probs=54.3
Q ss_pred CCceEEeCCCcEEEEEEEeeeCC---CEEEEEeCCEE-----ee--ccCC--------ccEEEec-------CCcEEEEE
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPE---PRIEWYKDGSL-----VS--AEIG--------SHRILLP-------AGSLFFLS 192 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~---p~i~W~~~g~~-----l~--~~~~--------~~~~~~~-------~~~l~~~~ 192 (238)
|..+++..|+++.|.|.+.+.+. +.+.|+|.... +. .... ..+..+. +.+|.
T Consensus 7 p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~--- 83 (123)
T 4gjt_B 7 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVL--- 83 (123)
T ss_dssp CSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEE---
T ss_pred CCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEE---
Confidence 45677889999999999876654 35889985321 10 0000 0112111 12344
Q ss_pred eecCCCCCCCeEEEEEEEe-CCCceeEEEEEEEEccC
Q psy18191 193 LVHGKKDTDSGVYWCVARN-ELGFARSKNATLDVAGK 228 (238)
Q Consensus 193 vi~~v~~~d~G~Y~C~a~N-~~G~~~s~~~~L~V~~~ 228 (238)
|.+++.+|+|.|.|.+.+ ..|... ..+.|.|.+.
T Consensus 84 -I~~v~~~DsG~Y~C~v~t~~~g~~~-~~~~L~VlE~ 118 (123)
T 4gjt_B 84 -LRNAVQADEGEYECRVSTFPAGSFQ-ARLRLRVLEH 118 (123)
T ss_dssp -EESCCSSSCSEEEEEEEESSSCEEE-EEEEEEC---
T ss_pred -ECCCChHHCEEEEEEEEECCCCeEE-eEEEEEEEEC
Confidence 666799999999998876 567775 5889998664
No 472
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=98.63 E-value=1.3e-07 Score=75.05 Aligned_cols=138 Identities=12% Similarity=0.223 Sum_probs=72.1
Q ss_pred EEEcCCCCCCCCCceEEEeCCCcc-----cCCceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEe
Q psy18191 82 YLVGSQASPDYPNRFSLCNNKTWQ-----KGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKAD 156 (238)
Q Consensus 82 ~l~~~~~~~~~~g~y~~~~~~~~~-----~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~ 156 (238)
.|.|.+++++|+|.|.|...+... .+.+.-.+.. ...+. +......+|.+...+....+.+|+.+.|.|.+.
T Consensus 103 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~--~~~l~-V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~ 179 (256)
T 3sob_H 103 YLQMNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQ--GTLVT-VSSASTKGPSVFPLAPSSKSTSGGTAALGCLVK 179 (256)
T ss_dssp EEEECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECC--CEEEE-ECSSCCBCCEEEEECCC-----TTEEEEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEecCCCccccccccceeEECC--CEEEE-EecCCCCCCEEEEECCCcccccCCcEEEEEEEE
Confidence 477778888888888866543110 0000111111 11111 111234567776433344567899999999998
Q ss_pred ee-C-CCEEEEEeCCEEeeccC-CccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCceeEEEEEEEEc
Q psy18191 157 GY-P-EPRIEWYKDGSLVSAEI-GSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVA 226 (238)
Q Consensus 157 g~-P-~p~i~W~~~g~~l~~~~-~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~ 226 (238)
+. | .+.+.| ++..+.... ........++...+ ...|......| |.|+|.+.|..+... ....|.+.
T Consensus 180 ~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~-~~~~~~~~ 250 (256)
T 3sob_H 180 DYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKKVEPK 250 (256)
T ss_dssp EEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEE-EEEECCCC
T ss_pred EEECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcc-eEEEeccc
Confidence 74 4 356999 554443210 00111223343332 22245557788 999999999987764 35555544
No 473
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.62 E-value=1.4e-07 Score=64.84 Aligned_cols=74 Identities=16% Similarity=0.216 Sum_probs=49.6
Q ss_pred ceEEeCCCcEEEEEEEeeeCCC-----EEEEEeCCEE-e-e-cc----------CCccEEEe--cCCcEEEEEeecCCCC
Q psy18191 140 SAVVPRHEPTTLNCKADGYPEP-----RIEWYKDGSL-V-S-AE----------IGSHRILL--PAGSLFFLSLVHGKKD 199 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~P~p-----~i~W~~~g~~-l-~-~~----------~~~~~~~~--~~~~l~~~~vi~~v~~ 199 (238)
.+.+.+|+++.|.|.+.+.|.+ .+.|++++.. + . .. ....+... .+..|. |.+++.
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~----I~~v~~ 78 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLR----LHNLQI 78 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEE----ECSCCG
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEE----EcCCCh
Confidence 3677899999999998766544 4999997642 1 0 00 00112221 233444 677799
Q ss_pred CCCeEEEEEEEeCCCcee
Q psy18191 200 TDSGVYWCVARNELGFAR 217 (238)
Q Consensus 200 ~d~G~Y~C~a~N~~G~~~ 217 (238)
+|+|.|.|.+.|..|...
T Consensus 79 ~D~G~Y~C~v~~~~~~~~ 96 (110)
T 1ncn_A 79 KDKGLYQCIIHHKKPTGM 96 (110)
T ss_dssp GGCEEEEEEEEEECSSSE
T ss_pred HHCEEEEEEEEcCCCCce
Confidence 999999999999887753
No 474
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.62 E-value=2.2e-07 Score=74.10 Aligned_cols=93 Identities=13% Similarity=0.197 Sum_probs=57.0
Q ss_pred CEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC--CEE---eeccCC----------c-cEEEec--CCcEEEEEe
Q psy18191 132 PRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD--GSL---VSAEIG----------S-HRILLP--AGSLFFLSL 193 (238)
Q Consensus 132 P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~--g~~---l~~~~~----------~-~~~~~~--~~~l~~~~v 193 (238)
+.+...|..+.+.+|+++.|.|.+.+ +.+.+.|+|. +.. +..... . +..... .+...+ .
T Consensus 28 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL--~ 104 (270)
T 3qib_D 28 MKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSL--E 104 (270)
T ss_dssp CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEE--E
T ss_pred eeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEE--E
Confidence 34555667788999999999999865 7789999982 211 100000 0 111111 122222 3
Q ss_pred ecCCCCCCCeEEEEEEEeCCCc---eeEEEEEEEEcc
Q psy18191 194 VHGKKDTDSGVYWCVARNELGF---ARSKNATLDVAG 227 (238)
Q Consensus 194 i~~v~~~d~G~Y~C~a~N~~G~---~~s~~~~L~V~~ 227 (238)
|..++.+|+|.|.|.+.|..+. .....+.|.|..
T Consensus 105 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 141 (270)
T 3qib_D 105 IQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLE 141 (270)
T ss_dssp ESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEES
T ss_pred ECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcc
Confidence 7888999999999999974321 111345677765
No 475
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.61 E-value=1.9e-07 Score=75.09 Aligned_cols=97 Identities=15% Similarity=0.254 Sum_probs=61.5
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCC--EE---eec-c-----------CCccEEEecCCcEEEEEe
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDG--SL---VSA-E-----------IGSHRILLPAGSLFFLSL 193 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g--~~---l~~-~-----------~~~~~~~~~~~~l~~~~v 193 (238)
.+.+...|..+.+.+|+++.|.|.+.+.|.+.+.|++++ .. +.. . ...+.....+..-...+.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 456677778899999999999999988888999999863 11 100 0 011222221111111223
Q ss_pred ecCCCCCCCeEEEEEEEeCCCc-----eeEEEEEEEEcc
Q psy18191 194 VHGKKDTDSGVYWCVARNELGF-----ARSKNATLDVAG 227 (238)
Q Consensus 194 i~~v~~~d~G~Y~C~a~N~~G~-----~~s~~~~L~V~~ 227 (238)
|..++.+|+|.|.|.+.|..|. .....+.|.|..
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~ 142 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTE 142 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEES
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEec
Confidence 7888999999999999995320 111235677765
No 476
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.61 E-value=1.8e-07 Score=65.57 Aligned_cols=89 Identities=13% Similarity=0.217 Sum_probs=54.4
Q ss_pred ceEEeCCCcEEEEEEEeeeC---CCEEEEEeCC--E---Eeecc-------CCccEEEe-cCCcEEEEEeecCCCCCCCe
Q psy18191 140 SAVVPRHEPTTLNCKADGYP---EPRIEWYKDG--S---LVSAE-------IGSHRILL-PAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 140 ~~~~~~G~~~~L~C~~~g~P---~p~i~W~~~g--~---~l~~~-------~~~~~~~~-~~~~l~~~~vi~~v~~~d~G 203 (238)
.+.+.+|++++|.|...+.+ .+.+.|++.. . .+... ...+.... .++.. .+.|..++.+|+|
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~--~L~I~~~~~~DsG 86 (120)
T 1oaq_L 9 ALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKA--ALTITGAQTEDEA 86 (120)
T ss_dssp EEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEE--EEEEESCCGGGCE
T ss_pred cEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeE--EEEECCCChhhCe
Confidence 47889999999999997765 5779999842 1 12110 01111111 22222 2237888999999
Q ss_pred EEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 204 VYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 204 ~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
.|.|.+.+..+.....-..|.|.+.+.
T Consensus 87 ~Y~C~~~~~~~~~fg~gt~L~V~~~~~ 113 (120)
T 1oaq_L 87 IYFCALWYSNHLVFGGGTKLTVLGQPK 113 (120)
T ss_dssp EEEEEEEETTEEEECCCEEEEECC---
T ss_pred EEEEEEccCCCcEECCCEEEEEcCCCC
Confidence 999999986432222245788877654
No 477
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.61 E-value=4.2e-07 Score=65.20 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=59.3
Q ss_pred EEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEeC---CEEeec--cCCccEEEecCCcEEEEEeecCCCCCCCeEEEEE
Q psy18191 134 ITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKD---GSLVSA--EIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCV 208 (238)
Q Consensus 134 i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~---g~~l~~--~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~ 208 (238)
+...|..+.+.+|++++|.|.+.+. .+.+.|++. |..+.. ...++.....++.. ..+.|..++.+|+|.|.|.
T Consensus 21 v~Q~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~-~~L~I~~~~~~Dsg~Y~C~ 98 (134)
T 3kg5_A 21 IWQSPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNESL-ATLTIQGIRFEDNGIYFCQ 98 (134)
T ss_dssp CEEECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECSSE-EEEEECSCCTTTCEEEEEE
T ss_pred EEEeCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEccCCE-EEEEECCCCcCcCEEEEEE
Confidence 4455667889999999999998765 578999987 332211 11122222222222 2233788899999999999
Q ss_pred EEeCCC-c-eeEEEEEEEEccCCCCCC
Q psy18191 209 ARNELG-F-ARSKNATLDVAGKISTAT 233 (238)
Q Consensus 209 a~N~~G-~-~~s~~~~L~V~~~~~~~~ 233 (238)
+.+..+ . ....-..|.|.+.+++.+
T Consensus 99 ~~~~~~~~~~fg~GT~L~V~~~p~~~~ 125 (134)
T 3kg5_A 99 QKCNNTSEVYQGCGTELRVMGFSTLAQ 125 (134)
T ss_dssp EECTTTCCEEECCCEEEEEECC-----
T ss_pred EEcCCCCceEECCCEEEEEecCCCHHH
Confidence 998632 1 111245788887766543
No 478
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.60 E-value=2.5e-07 Score=71.91 Aligned_cols=88 Identities=11% Similarity=0.277 Sum_probs=56.6
Q ss_pred CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCC--EEee---c------------cCCccEEEec---CCcEEEEEeec
Q psy18191 138 PASAVVPRHEPTTLNCKADGYP--EPRIEWYKDG--SLVS---A------------EIGSHRILLP---AGSLFFLSLVH 195 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g--~~l~---~------------~~~~~~~~~~---~~~l~~~~vi~ 195 (238)
|..+.+.+|+++.|.|.+.+.| .+.+.|+++. ..+. . ....+..... .+... +.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s--L~I~ 84 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVY--LQMH 84 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEE--EEEC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEE--EEEC
Confidence 4467889999999999998876 6889999852 2111 0 0011222111 12222 2378
Q ss_pred CCCCCCCeEEEEEEEeCCC-----c--eeEEEEEEEEcc
Q psy18191 196 GKKDTDSGVYWCVARNELG-----F--ARSKNATLDVAG 227 (238)
Q Consensus 196 ~v~~~d~G~Y~C~a~N~~G-----~--~~s~~~~L~V~~ 227 (238)
.++.+|+|.|.|.+.|..| . .....+.|.|..
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (225)
T 1op3_H 85 KMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSP 123 (225)
T ss_dssp SCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEES
T ss_pred CCChhhCEEEEEEEecCCCccccccceeecCCEEEeccc
Confidence 8899999999999999875 2 111245777765
No 479
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.60 E-value=1.3e-07 Score=72.47 Aligned_cols=86 Identities=13% Similarity=0.300 Sum_probs=54.4
Q ss_pred CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeC--CEEee---c-----------cCCccEEEec---CCcEEEEEeecC
Q psy18191 138 PASAVVPRHEPTTLNCKADGYP--EPRIEWYKD--GSLVS---A-----------EIGSHRILLP---AGSLFFLSLVHG 196 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~--g~~l~---~-----------~~~~~~~~~~---~~~l~~~~vi~~ 196 (238)
|..+.+.+|+++.|.|.+.|.| .+.+.|+|+ +..+. . ....+..... .+.. .+.|..
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~--~L~I~~ 84 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQY--YLDLNS 84 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEE--EEEECS
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEE--EEEECC
Confidence 4567889999999999999875 489999985 32211 0 0011222111 1211 223788
Q ss_pred CCCCCCeEEEEEEEeCCCceeEEEEEEEEcc
Q psy18191 197 KKDTDSGVYWCVARNELGFARSKNATLDVAG 227 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~ 227 (238)
++.+|+|.|.|.|.|..... ..+.|.|..
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~--~~~~l~V~~ 113 (210)
T 3d9a_H 85 VTTEDTATYYCANWDGDYWG--QGTLVTVSA 113 (210)
T ss_dssp CCGGGCEEEEEEETTSSCBC--CCEEEEECC
T ss_pred CCcccCEEEEEEEecCcccc--cceEEEecc
Confidence 89999999999999964211 235666653
No 480
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=98.60 E-value=1.1e-06 Score=61.54 Aligned_cols=90 Identities=19% Similarity=0.176 Sum_probs=59.5
Q ss_pred ccCCEEEeCCCceEEeCCCcEEEEEEEeeeCC----CEEEEEeCCEEeeccCCccEEEe-cCCcEEEEEeecCCCCCCCe
Q psy18191 129 YRVPRITEHPASAVVPRHEPTTLNCKADGYPE----PRIEWYKDGSLVSAEIGSHRILL-PAGSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 129 ~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~----p~i~W~~~g~~l~~~~~~~~~~~-~~~~l~~~~vi~~v~~~d~G 203 (238)
..+|.+...|. ..+..|+.++|.| .. .+. -.+.|+|+|..+.. .... ....-.+ .|..++.+|+|
T Consensus 7 lpkPsL~a~P~-~vV~~G~~VTL~C-~~-~~~~~~~~~f~L~k~g~~~~~-----~~~~~~~~~a~f--~i~~vt~~daG 76 (118)
T 4ety_A 7 LPDITIFPNSS-LMISQGTFVTVVC-SY-SDKHDLYNMVRLEKDGSTFME-----KSTEPYKTEDEF--EIGPVNETITG 76 (118)
T ss_dssp CCEEEEECCSE-EEEETTCCEEEEE-EC-TTTGGGCCEEEEEETTEEEEE-----EECCSSSSEEEE--EECSCCGGGCE
T ss_pred CCCCEEEEeCC-CcccCCCcEEEEE-CC-CCCCcccCEEEEEECCcCccc-----cccCCCCcceEE--EeCccCccCCe
Confidence 35677766554 5678999999999 63 233 57999999976531 1111 1111222 26777999999
Q ss_pred EEEEEEEeCCC-ceeEEEEEEEEccC
Q psy18191 204 VYWCVARNELG-FARSKNATLDVAGK 228 (238)
Q Consensus 204 ~Y~C~a~N~~G-~~~s~~~~L~V~~~ 228 (238)
.|.|...+..+ +..|+.+.|.|.+.
T Consensus 77 ~Y~C~y~~~~~wS~~Sdpl~L~Vtg~ 102 (118)
T 4ety_A 77 HYSCIYSKGITWSERSKTLELKVIKE 102 (118)
T ss_dssp EEEEEEEC----CEECCCEEEEEECC
T ss_pred EEEEEeeCCCccccccCCEEEEEEEe
Confidence 99999998776 34467889999876
No 481
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.59 E-value=1.1e-08 Score=79.10 Aligned_cols=87 Identities=23% Similarity=0.326 Sum_probs=57.2
Q ss_pred CceEEeCCCcEEEEEEEeeeCC-----CEEEEEeCCEEee-----------ccCCccEEEec------CCcEEEEEeecC
Q psy18191 139 ASAVVPRHEPTTLNCKADGYPE-----PRIEWYKDGSLVS-----------AEIGSHRILLP------AGSLFFLSLVHG 196 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P~-----p~i~W~~~g~~l~-----------~~~~~~~~~~~------~~~l~~~~vi~~ 196 (238)
..+.+.+|+++.|.|.+.+.|. +.+.|++++.... .....+..... +..|. |..
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~----I~~ 78 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLR----LQR 78 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEE----ECS
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEE----ECC
Confidence 3466789999999999988764 7899999764321 00011111111 33454 667
Q ss_pred CCCCCCeEEEEEEEeCCCceeEEEEEEEEccCCCC
Q psy18191 197 KKDTDSGVYWCVARNELGFARSKNATLDVAGKIST 231 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~ 231 (238)
++.+|+|.|+|.+.|.. ... ..+.|.|..++..
T Consensus 79 v~~~D~G~Y~C~~~~~~-~~~-~~~~l~V~~~~~~ 111 (222)
T 4i0k_A 79 VRVTDEGSYTCFVSIQD-FDS-AAVSLQVAAPYSK 111 (222)
T ss_dssp CCGGGCSCEEEEEEECC-CCC-CCCCCCCCBCCCC
T ss_pred cccccCEEEEEEEEeCC-Cce-EEEEEEEEcCCCC
Confidence 79999999999999863 332 4667777665443
No 482
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.59 E-value=1.5e-07 Score=72.40 Aligned_cols=64 Identities=16% Similarity=0.264 Sum_probs=43.7
Q ss_pred EEEEEEEeee-CC-CEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 149 TTLNCKADGY-PE-PRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 149 ~~L~C~~~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
+.|.|.+.|. |. |.+.|+++ ..+... ........++.+.+... ....|.|.|+|.+.|..+...
T Consensus 135 ~~l~C~~~g~~P~~~~v~W~~~-~~l~~~-~~~~~~~~~g~y~~~~~---~~~~~~~~ytC~v~~~~~~~~ 200 (207)
T 1ypz_E 135 TNVACLVKDFYPKEVTISLRSS-KKIVEF-DPAIVISPSGKYSAVKL---GQYGDSNSVTCSVQHNSETVH 200 (207)
T ss_dssp TEEEEEEEEESSSCCEEEEECS-SEEEEC-CCEEEECTTSSEEEEEC---EEESSTTTCEEEEEETTEEEE
T ss_pred CeEEEEEeeEeCCCeEEEEecC-CcccCC-ccceEEcCCCcEEEEEe---ecccCCCcEEEEEEECCccEe
Confidence 6899999876 44 79999999 666532 12222244566665433 233678999999999887653
No 483
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.58 E-value=2.2e-07 Score=71.81 Aligned_cols=87 Identities=13% Similarity=0.313 Sum_probs=55.3
Q ss_pred CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCC--EE---eec---c-----------CCccEEEec---CCcEEEEEe
Q psy18191 138 PASAVVPRHEPTTLNCKADGYP--EPRIEWYKDG--SL---VSA---E-----------IGSHRILLP---AGSLFFLSL 193 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g--~~---l~~---~-----------~~~~~~~~~---~~~l~~~~v 193 (238)
|..+.+.+|+++.|.|.+.+.| .+.+.|+++. .. +.. . ...+..... .+.. .+.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~--~L~ 84 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSIL--YLQ 84 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEE--EEE
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeE--EEE
Confidence 4457889999999999998865 6889999842 21 100 0 011121111 1222 223
Q ss_pred ecCCCCCCCeEEEEEEEeCCC-----ceeEEEEEEEEcc
Q psy18191 194 VHGKKDTDSGVYWCVARNELG-----FARSKNATLDVAG 227 (238)
Q Consensus 194 i~~v~~~d~G~Y~C~a~N~~G-----~~~s~~~~L~V~~ 227 (238)
|..++.+|+|.|.|.+.|..| ... ..+.|.|..
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~-~~~~l~V~~ 122 (222)
T 1q9r_B 85 MNTLRAEDSATYYCARDHDGYYERFSYWG-QGTLVTVSA 122 (222)
T ss_dssp ECSCCGGGCEEEEEEECCCSSCCSCCCBC-CCEEEEECS
T ss_pred ECcCCcccCeEEEEEEeccCCcccceEeC-CceEEEecc
Confidence 788899999999999999765 221 245677764
No 484
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.58 E-value=8.4e-07 Score=69.71 Aligned_cols=96 Identities=13% Similarity=0.254 Sum_probs=59.1
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeee--CCCEEEEEeCC--E---Eeec-c-----------CCccEEEe-cCCcEEEEE
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGY--PEPRIEWYKDG--S---LVSA-E-----------IGSHRILL-PAGSLFFLS 192 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~g--~---~l~~-~-----------~~~~~~~~-~~~~l~~~~ 192 (238)
.+...|..+.+.+|+++.|.|.+.+. +.+.+.|+|+. . .+.. . ...+.... ..+.-...+
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTL 82 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEE
Confidence 45555677889999999999999875 67889999842 2 1110 0 01111111 111011122
Q ss_pred eecCCCCCCCeEEEEEEEeCCC-c-----eeEEEEEEEEccC
Q psy18191 193 LVHGKKDTDSGVYWCVARNELG-F-----ARSKNATLDVAGK 228 (238)
Q Consensus 193 vi~~v~~~d~G~Y~C~a~N~~G-~-----~~s~~~~L~V~~~ 228 (238)
.|..++.+|+|.|.|.+.|..+ . .....+.|.|...
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~ 124 (242)
T 1hxm_B 83 TIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDK 124 (242)
T ss_dssp EECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESS
T ss_pred EECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEccc
Confidence 3788899999999999998631 1 1112457888763
No 485
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.58 E-value=5.4e-08 Score=74.79 Aligned_cols=56 Identities=21% Similarity=0.400 Sum_probs=44.8
Q ss_pred eCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeC
Q psy18191 144 PRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNE 212 (238)
Q Consensus 144 ~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~ 212 (238)
.+|+++.|.|.+ |.|.+.|+|+|..+... ...++.|.+..+ +.+|+|.|+|.|.|.
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~------~~~~~~L~i~~v----~~~DsG~Y~C~~~~~ 71 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFKDGKMIGFL------TEDKKKWNLGSN----AKDPRGMYQCKGSQN 71 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEETTEEEEEE------ESSCCCEEEEEG----GGCCEEEEEEESSSS
T ss_pred cCCCeEEEEEcC---CCCEEEEEECCEECCCC------CCCCCeEEeCCC----CcCCCEEEEEEecCC
Confidence 579999999998 88999999999888632 123566776555 999999999997653
No 486
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.58 E-value=3.2e-07 Score=63.64 Aligned_cols=90 Identities=19% Similarity=0.209 Sum_probs=56.3
Q ss_pred CCceEEeCCCcEEEEEEEeee--CCCEEEEEeCC-------EEeeccCC-------ccEEEec----CCcEEEEEeecCC
Q psy18191 138 PASAVVPRHEPTTLNCKADGY--PEPRIEWYKDG-------SLVSAEIG-------SHRILLP----AGSLFFLSLVHGK 197 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~g-------~~l~~~~~-------~~~~~~~----~~~l~~~~vi~~v 197 (238)
|..+.+.+|++++|.|..... ....+.|++.. ..+..... ..++.+. .+...+ .|.++
T Consensus 4 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL--~I~~v 81 (115)
T 2or7_A 4 HTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSL--TIENT 81 (115)
T ss_dssp --CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCE--EESSC
T ss_pred ccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEE--EEccC
Confidence 567888999999999997643 34679999974 22211101 1112111 122222 27788
Q ss_pred CCCCCeEEEEEEEeCCCceeEEEEEEEEccCCC
Q psy18191 198 KDTDSGVYWCVARNELGFARSKNATLDVAGKIS 230 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~ 230 (238)
+.+|+|.|.|.+.+...... ..+.|.|.+.+.
T Consensus 82 ~~~DsG~Y~C~v~~~~~~~~-~~v~L~V~~~~~ 113 (115)
T 2or7_A 82 VVGDGGPYCCVVEIPGAFHF-VDYMLEVKPELV 113 (115)
T ss_dssp CGGGCEEEEEEECCTTSCEE-EEEEEEEESCC-
T ss_pred CHHHCEEEEEEEECCCceeE-EEEEEEEcCCCC
Confidence 99999999999987655443 588888866543
No 487
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.57 E-value=1.3e-07 Score=76.85 Aligned_cols=82 Identities=13% Similarity=0.107 Sum_probs=49.8
Q ss_pred eEEeCCCcEEEEEEEeeeCC-C--EEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCC-CeEEEEEEEeCCCc-
Q psy18191 141 AVVPRHEPTTLNCKADGYPE-P--RIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTD-SGVYWCVARNELGF- 215 (238)
Q Consensus 141 ~~~~~G~~~~L~C~~~g~P~-p--~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d-~G~Y~C~a~N~~G~- 215 (238)
..+.+|+.++|.|.+.|.++ + .|+|+|++..+.... .........+ .+. +..+| .+.|+|.|.|.++.
T Consensus 96 ~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~----~~~~~~~~~l--~~~-~~~~D~g~~~~C~A~~~l~~~ 168 (291)
T 1mq8_A 96 SWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP----AVGEPAEVTT--TVL-VRRDHHGANFSCRTELDLRPQ 168 (291)
T ss_dssp SBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEE----CCBTTEEEEE--ECC-CSSSCSSCEEEEEEEEECGGG
T ss_pred ccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeeccc----CCCCCceEEE--Eee-eeeccCCceEEEEEEecCCcc
Confidence 44788999999999977544 3 589999998876421 0011111111 122 34555 45999999998763
Q ss_pred ------eeEEEEEEEEccCC
Q psy18191 216 ------ARSKNATLDVAGKI 229 (238)
Q Consensus 216 ------~~s~~~~L~V~~~~ 229 (238)
..+....|.|..+|
T Consensus 169 g~~l~~~~s~~~~L~V~~~P 188 (291)
T 1mq8_A 169 GLELFENTSAPYQLQTFVLP 188 (291)
T ss_dssp TSCEEEECCCCEECBC----
T ss_pred CCccccccccceEEEEEecC
Confidence 12346778887664
No 488
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.57 E-value=4e-08 Score=88.22 Aligned_cols=87 Identities=18% Similarity=0.306 Sum_probs=62.4
Q ss_pred CceEEeCCCcEEEEEEEeeeCCCEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCCCCeEEEEEEEeCCCc---
Q psy18191 139 ASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGF--- 215 (238)
Q Consensus 139 ~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~d~G~Y~C~a~N~~G~--- 215 (238)
..+.+.+|+++.|.|.+.| |.|.+.|++++..+... ...++...++.|. |..++..|+|.|.|.|.|..+.
T Consensus 541 ~~v~v~~g~~~~L~C~~~s-p~a~v~W~~~~~~l~~~-~~~~~~~~~~~Ll----I~~v~~~DsG~Y~C~A~e~~~~~~~ 614 (663)
T 1olz_A 541 RQHFFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAE-SPKYGLMGRKNLL----IFNLSEGDSGVYQCLSEERVKNKTV 614 (663)
T ss_dssp EEEEEETTSCEEECCCCSC-TTCEEEEEESSSBCCCC-SSSBCCTTTTCEE----ECSCCGGGCEEEEEEEEEECSSSEE
T ss_pred eEEEEecCCcEEEEccCCC-CCCcEEEEECCeecccc-CcceEEecCCeEE----EEecCcccCeEEEEEEEECccCCCc
Confidence 3567889999999999999 99999999999877643 2233334466776 4555999999999999998522
Q ss_pred --eeEEEEEEEEccCCCCC
Q psy18191 216 --ARSKNATLDVAGKISTA 232 (238)
Q Consensus 216 --~~s~~~~L~V~~~~~~~ 232 (238)
.. ..+.|.|..+|...
T Consensus 615 ~~~~-~~~~l~V~v~P~~~ 632 (663)
T 1olz_A 615 FQVV-AKHVLEVKVVPKPV 632 (663)
T ss_dssp EEEE-EEEEEEEEC-----
T ss_pred eEEE-EEEEEEEEeCCccC
Confidence 32 47778887765443
No 489
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=97.99 E-value=6.5e-09 Score=71.93 Aligned_cols=76 Identities=20% Similarity=0.270 Sum_probs=49.0
Q ss_pred CCCceEEeCCCcEEEEEEEeeeCCCEEEEEeCCE--Eee---c------cCCccEEEecC--CcEEEEEeecCCCCCCCe
Q psy18191 137 HPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGS--LVS---A------EIGSHRILLPA--GSLFFLSLVHGKKDTDSG 203 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~~g~--~l~---~------~~~~~~~~~~~--~~l~~~~vi~~v~~~d~G 203 (238)
.|..+.+.+|++++|.|.+.+.+.+.+.|++... .+. . .....++.... ......+.|..++.+|+|
T Consensus 5 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG 84 (110)
T 1u3h_A 5 SPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSA 84 (110)
Confidence 4567788999999999999888888999998632 111 0 00111222211 111111226666999999
Q ss_pred EEEEEEEeC
Q psy18191 204 VYWCVARNE 212 (238)
Q Consensus 204 ~Y~C~a~N~ 212 (238)
.|.|.+.|.
T Consensus 85 ~Y~C~~~~~ 93 (110)
T 1u3h_A 85 TYFCAASAN 93 (110)
Confidence 999999985
No 490
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.57 E-value=8.1e-07 Score=62.71 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=58.4
Q ss_pred CCceEEeCCCcEEEEEEEeeeCC-CEEEEEeCCE-----EeeccCC-------ccEEEe---cCCcEEEEEeecCCCCCC
Q psy18191 138 PASAVVPRHEPTTLNCKADGYPE-PRIEWYKDGS-----LVSAEIG-------SHRILL---PAGSLFFLSLVHGKKDTD 201 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P~-p~i~W~~~g~-----~l~~~~~-------~~~~~~---~~~~l~~~~vi~~v~~~d 201 (238)
|..+.+.+|++++|.|...+... ..+.|++... .+..... ++.... ..+... +.|..++.+|
T Consensus 9 p~~v~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~s--L~I~~l~~~D 86 (124)
T 2nms_A 9 PTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFT--VTMEDLMKTD 86 (124)
T ss_dssp CSEEEEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEE--EEECSCCGGG
T ss_pred ccEEEEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEE--EEEeCCCHHH
Confidence 45678899999999999865432 4699998532 1211100 111111 122233 2378889999
Q ss_pred CeEEEEEEEeCCCceeEEEEEEEEccCCCCCCCCCC
Q psy18191 202 SGVYWCVARNELGFARSKNATLDVAGKISTATDCSF 237 (238)
Q Consensus 202 ~G~Y~C~a~N~~G~~~s~~~~L~V~~~~~~~~~~~~ 237 (238)
+|.|.|...+..... ...+.|.|...+.++.+.++
T Consensus 87 sg~Y~C~~~~~~~~~-~~~v~L~V~~~~~~~~~~~~ 121 (124)
T 2nms_A 87 ADTYWCGIEKTGNDL-GVTVQVTIDPAPVTQEETSS 121 (124)
T ss_dssp CEEEEEEEEETTEEE-EEEEEEEEECCC--------
T ss_pred CEEEEEEEEcCCCCc-cEEEEEEEeCCCcCCCCccc
Confidence 999999998764333 35789999999888877654
No 491
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.57 E-value=6.3e-07 Score=69.37 Aligned_cols=91 Identities=13% Similarity=0.347 Sum_probs=57.2
Q ss_pred CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCC--E---Eeecc------------CCccEEEecC-CcEEEEEeecCC
Q psy18191 138 PASAVVPRHEPTTLNCKADGYP--EPRIEWYKDG--S---LVSAE------------IGSHRILLPA-GSLFFLSLVHGK 197 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g--~---~l~~~------------~~~~~~~~~~-~~l~~~~vi~~v 197 (238)
|..+.+.+|+++.|.|.+.+.| .+.+.|+++. . .+... ...+.....+ ..-...+.|..+
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 3468889999999999998876 6789999842 1 11110 0112222211 111112237888
Q ss_pred CCCCCeEEEEEEEeCCCce--eEEEEEEEEccC
Q psy18191 198 KDTDSGVYWCVARNELGFA--RSKNATLDVAGK 228 (238)
Q Consensus 198 ~~~d~G~Y~C~a~N~~G~~--~s~~~~L~V~~~ 228 (238)
+.+|+|.|.|.+.|..+.. ....+.|.|...
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~ 119 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAE 119 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCC
Confidence 9999999999999986531 112457888753
No 492
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=98.56 E-value=6.9e-07 Score=78.95 Aligned_cols=87 Identities=18% Similarity=0.340 Sum_probs=54.6
Q ss_pred CccCCEEEeCCCceEEeCCCcEEEEEEEeee-CC-CEEEEEeCCEEeeccCCccEEEecCCcEEEEEeecCCCCC---CC
Q psy18191 128 GYRVPRITEHPASAVVPRHEPTTLNCKADGY-PE-PRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDT---DS 202 (238)
Q Consensus 128 v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~l~~~~vi~~v~~~---d~ 202 (238)
...+|.+...+.......|+.+.|.|.+.|. |. ..|+|+++|..+............++++.+...+.. ... +.
T Consensus 446 ~~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~l~v-~~~~~~~~ 524 (551)
T 1ntl_A 446 RPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNGSYFVYSKLNV-QKSNWEAG 524 (551)
T ss_pred CCcCCceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEccCceeccceeCCCCCEEEEEEEEE-cHHHcCCC
Confidence 3467776554333334578999999999985 43 479999999987521111222234566665332221 333 47
Q ss_pred eEEEEEEEeCCCc
Q psy18191 203 GVYWCVARNELGF 215 (238)
Q Consensus 203 G~Y~C~a~N~~G~ 215 (238)
+.|+|.+.+..-.
T Consensus 525 ~~ytC~V~h~~l~ 537 (551)
T 1ntl_A 525 NTFTCSVLHEGLH 537 (551)
T ss_pred CeEEEEEEECCCC
Confidence 8999999987643
No 493
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.56 E-value=5.8e-08 Score=76.03 Aligned_cols=86 Identities=10% Similarity=0.044 Sum_probs=58.2
Q ss_pred cCCEEE-eCCCceEEeCCCcEEEEEEEeee-CC-C-EEEEEeCCEEe-eccCCccEEEecCCcEE--EEEeecCCCCCCC
Q psy18191 130 RVPRIT-EHPASAVVPRHEPTTLNCKADGY-PE-P-RIEWYKDGSLV-SAEIGSHRILLPAGSLF--FLSLVHGKKDTDS 202 (238)
Q Consensus 130 ~~P~i~-~~~~~~~~~~G~~~~L~C~~~g~-P~-p-~i~W~~~g~~l-~~~~~~~~~~~~~~~l~--~~~vi~~v~~~d~ 202 (238)
.+|.+. ..|....+.+|+.+.|.|.+.|. |. | .+.|+++|..+ ... ........+|... ..+.|..+..+|.
T Consensus 11 ~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~-~~~~~~~~~g~~~~~s~L~I~~~~~~D~ 89 (231)
T 2w59_A 11 SPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPD-PMVLQEHFNGTYSASSAVPVSTQDWLSG 89 (231)
T ss_dssp -CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCC-CCEEEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccc-cccceECCCCcEEEEEEEEecchhccCC
Confidence 466654 45666777899999999999986 64 5 99999999877 321 1111122334322 1223566678899
Q ss_pred eEEEEEEEeCCCce
Q psy18191 203 GVYWCVARNELGFA 216 (238)
Q Consensus 203 G~Y~C~a~N~~G~~ 216 (238)
|.|+|.|.|..+..
T Consensus 90 g~Y~C~~~~~~~~~ 103 (231)
T 2w59_A 90 ERFTCTVQHEELPL 103 (231)
T ss_dssp CCEEEEEECTTCSS
T ss_pred CEEEEEEEcCCCCC
Confidence 99999999988654
No 494
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.56 E-value=3.8e-07 Score=72.62 Aligned_cols=93 Identities=15% Similarity=0.244 Sum_probs=57.9
Q ss_pred CCEEEeCCCceEEeCCCcEEEEEEEeeeCCCEEEEEe--CCEEe------------eccC-C-ccEEEec--CCcEEEEE
Q psy18191 131 VPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYK--DGSLV------------SAEI-G-SHRILLP--AGSLFFLS 192 (238)
Q Consensus 131 ~P~i~~~~~~~~~~~G~~~~L~C~~~g~P~p~i~W~~--~g~~l------------~~~~-~-~~~~~~~--~~~l~~~~ 192 (238)
.+.+...|..+.+.+|+++.|.|.+. .+.+.+.|+| .+..+ .... . ++..... .+...+
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL-- 102 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTL-- 102 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEE--
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEE--
Confidence 34455566778899999999999986 5788999998 22111 1000 0 1222221 112222
Q ss_pred eecCCCCCCCeEEEEEEEeC--CCceeEEEEEEEEcc
Q psy18191 193 LVHGKKDTDSGVYWCVARNE--LGFARSKNATLDVAG 227 (238)
Q Consensus 193 vi~~v~~~d~G~Y~C~a~N~--~G~~~s~~~~L~V~~ 227 (238)
.|..++.+|+|.|.|.+.|. .+... ....|.|..
T Consensus 103 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~-~~~~l~V~~ 138 (268)
T 3pl6_D 103 KIQRTERGDSAVYLCATSALGDTQYFG-PGTRLTVLE 138 (268)
T ss_dssp EECSCCGGGCEEEEEEEESSSSSCEEC-CCEEEEEES
T ss_pred EECCCCcccCEEEEEEEecCCCceeeC-CcEEEEEec
Confidence 37788999999999999984 33332 355677765
No 495
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.56 E-value=6.6e-07 Score=68.81 Aligned_cols=89 Identities=13% Similarity=0.289 Sum_probs=55.1
Q ss_pred CCCceEEeCCCcEEEEEEEeee--CCCEEEEEeCC--EEee----cc----------CCccEEEecCCcEEEEEeecCCC
Q psy18191 137 HPASAVVPRHEPTTLNCKADGY--PEPRIEWYKDG--SLVS----AE----------IGSHRILLPAGSLFFLSLVHGKK 198 (238)
Q Consensus 137 ~~~~~~~~~G~~~~L~C~~~g~--P~p~i~W~~~g--~~l~----~~----------~~~~~~~~~~~~l~~~~vi~~v~ 198 (238)
.|..+.+.+|+++.|.|.+.+. +.+.+.|++.. ..+. .. ...+......+.. ..+.|..++
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~ 83 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTT-VDLKITSPT 83 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSE-EEEEESSCC
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCE-EEEEECCCC
Confidence 3456888999999999999774 36789999732 1110 00 0111111112221 112378889
Q ss_pred CCCCeEEEEEEEeCCCc---eeEEEEEEEEc
Q psy18191 199 DTDSGVYWCVARNELGF---ARSKNATLDVA 226 (238)
Q Consensus 199 ~~d~G~Y~C~a~N~~G~---~~s~~~~L~V~ 226 (238)
.+|+|.|.|.+.|..+. .....+.|.|.
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 114 (215)
T 3nl4_H 84 TEDTATYFCVRKYGSEWGGDLWGPGTLVTVS 114 (215)
T ss_dssp GGGCEEEEEEEECSSSSCEEEECCCEEEEEC
T ss_pred cccCEEEEEEEecCCCccceEEcCCEEEEEe
Confidence 99999999999998653 11234567776
No 496
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=98.55 E-value=6.4e-07 Score=75.48 Aligned_cols=108 Identities=22% Similarity=0.296 Sum_probs=61.0
Q ss_pred cCCceEEeCCCCcceecceecCCccCCEEEeCCCceE-EeCCC-cEEEEEEEeee-CC--CEEEEE-eCC---EEeeccC
Q psy18191 106 KGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAV-VPRHE-PTTLNCKADGY-PE--PRIEWY-KDG---SLVSAEI 176 (238)
Q Consensus 106 ~G~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~-~~~G~-~~~L~C~~~g~-P~--p~i~W~-~~g---~~l~~~~ 176 (238)
.|.|.|.+..........+.+.+..+|.+...+.... +..|+ .+.|.|.+.|. |. +.++|+ +++ ..+....
T Consensus 266 ~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~~~~VtW~~rdg~~g~~~~~~~ 345 (401)
T 3f8u_B 266 EGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEVEWELRGGPGGRSQKAEG 345 (401)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSSTTCEEEEEEESSSSCSCEECCS
T ss_pred CceEEEEEEecccceeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcCCCCcEEEEEecCCCCCceecccc
Confidence 5555554443322222233344567888876655544 45676 89999999886 55 689995 775 2222110
Q ss_pred ---CccEEEecCCcEEEEEeecCCC--CCCC-eEEEEEEEeCC
Q psy18191 177 ---GSHRILLPAGSLFFLSLVHGKK--DTDS-GVYWCVARNEL 213 (238)
Q Consensus 177 ---~~~~~~~~~~~l~~~~vi~~v~--~~d~-G~Y~C~a~N~~ 213 (238)
........+|...+...+.... .++. +.|+|.+.|..
T Consensus 346 ~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 346 QRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp EEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred cccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 0111223456666554432222 1244 59999999987
No 497
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.55 E-value=3.1e-08 Score=78.14 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=54.4
Q ss_pred CCEE-EeCCCceE-EeCCCcEEEEEEEeee---CCC-EEEEEeCCEEeeccCCccEEEecCCcEE--EEEeecCCCCCCC
Q psy18191 131 VPRI-TEHPASAV-VPRHEPTTLNCKADGY---PEP-RIEWYKDGSLVSAEIGSHRILLPAGSLF--FLSLVHGKKDTDS 202 (238)
Q Consensus 131 ~P~i-~~~~~~~~-~~~G~~~~L~C~~~g~---P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~l~--~~~vi~~v~~~d~ 202 (238)
+|.+ ...+.... +.+|+++.|.|.+.|. |.| .+.|++++..+............++... ..+.|..+..+|.
T Consensus 15 ~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~ 94 (239)
T 1i1c_A 15 VSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNG 94 (239)
T ss_dssp --CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCC
Confidence 3444 34343333 6799999999999887 777 8999999866542100001111222211 1223566688899
Q ss_pred eEEEEEEEeCCCce
Q psy18191 203 GVYWCVARNELGFA 216 (238)
Q Consensus 203 G~Y~C~a~N~~G~~ 216 (238)
|.|.|.|.|..|..
T Consensus 95 g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 95 KTFKCKVNSGAFPA 108 (239)
T ss_dssp CCEEEEEECSSSSS
T ss_pred CeEEEEEecccCCC
Confidence 99999999998864
No 498
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=98.54 E-value=9.8e-08 Score=74.40 Aligned_cols=131 Identities=11% Similarity=0.205 Sum_probs=69.6
Q ss_pred EEEEcCCCCCCCCCceEEEeCCCccc-C--CceEEeCCCCcceecceecCCccCCEEEeCCCceEEeCCCcEEEEEEEee
Q psy18191 81 MYLVGSQASPDYPNRFSLCNNKTWQK-G--LPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADG 157 (238)
Q Consensus 81 ~~l~~~~~~~~~~g~y~~~~~~~~~~-G--~y~c~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~G~~~~L~C~~~g 157 (238)
..|.|.++.++|+|.|.|...+.... . .+.-.+. ....+. +......+|.+...+....+..|+.+.|.|.+.+
T Consensus 79 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~--~~t~l~-V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~ 155 (226)
T 3mlr_H 79 AYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWG--QGTMIL-VSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKD 155 (226)
T ss_dssp EEEEESSCCGGGCEEEEEEEEEEEESSSEEEEEEEEC--CCEEEE-ECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEeEccCCCcccccchhhhhC--CccEEe-eccCCCCCCcEEEecCcccccCCCCEEEEEEEEE
Confidence 45778888888888888665431000 0 0000110 111111 1112345677764333333468999999999987
Q ss_pred e-C-CCEEEEEeCCEEeeccC-CccEEEecCCcEEE--EEeecCCCCCCCeEEEEEEEeCCCcee
Q psy18191 158 Y-P-EPRIEWYKDGSLVSAEI-GSHRILLPAGSLFF--LSLVHGKKDTDSGVYWCVARNELGFAR 217 (238)
Q Consensus 158 ~-P-~p~i~W~~~g~~l~~~~-~~~~~~~~~~~l~~--~~vi~~v~~~d~G~Y~C~a~N~~G~~~ 217 (238)
. | .+.+.| ++..+.... ........++...+ ...|......| |.|+|.+.|..+...
T Consensus 156 ~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~ 217 (226)
T 3mlr_H 156 YFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 217 (226)
T ss_dssp EBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEE
T ss_pred EECCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcC
Confidence 5 4 357999 443332110 00111223343332 22245556778 999999999887753
No 499
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.53 E-value=2.5e-07 Score=64.70 Aligned_cols=77 Identities=25% Similarity=0.417 Sum_probs=51.0
Q ss_pred EEEeCCCceEEeCCCcEEEEEEEeee-CCCEEEEEeCCE----EeeccCC------ccEEE---ecC--CcEEEEEeecC
Q psy18191 133 RITEHPASAVVPRHEPTTLNCKADGY-PEPRIEWYKDGS----LVSAEIG------SHRIL---LPA--GSLFFLSLVHG 196 (238)
Q Consensus 133 ~i~~~~~~~~~~~G~~~~L~C~~~g~-P~p~i~W~~~g~----~l~~~~~------~~~~~---~~~--~~l~~~~vi~~ 196 (238)
.+...|..+.+.+|++++|.|.+.+. |.+.+.|++++. .+..... ..... ... ..|. |..
T Consensus 9 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~----I~~ 84 (120)
T 2yz1_A 9 KVTQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIR----ISN 84 (120)
T ss_dssp CEECCSSEEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEE----ECS
T ss_pred EEECCCceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEE----ECC
Confidence 34555667889999999999998765 668899999751 1211000 00100 011 2333 677
Q ss_pred CCCCCCeEEEEEEEeCC
Q psy18191 197 KKDTDSGVYWCVARNEL 213 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~ 213 (238)
++.+|+|.|.|.+.|..
T Consensus 85 v~~~DsG~Y~C~~~~~~ 101 (120)
T 2yz1_A 85 VTPEDAGTYYCVKFQKG 101 (120)
T ss_dssp CCGGGCEEEEEEEEECC
T ss_pred CCHHHCEEEEEEEEcCC
Confidence 79999999999999864
No 500
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.51 E-value=3.1e-07 Score=70.80 Aligned_cols=88 Identities=15% Similarity=0.406 Sum_probs=55.5
Q ss_pred CCceEEeCCCcEEEEEEEeeeC--CCEEEEEeCC--EEe---ecc-----------CCccEEEec---CCcEEEEEeecC
Q psy18191 138 PASAVVPRHEPTTLNCKADGYP--EPRIEWYKDG--SLV---SAE-----------IGSHRILLP---AGSLFFLSLVHG 196 (238)
Q Consensus 138 ~~~~~~~~G~~~~L~C~~~g~P--~p~i~W~~~g--~~l---~~~-----------~~~~~~~~~---~~~l~~~~vi~~ 196 (238)
|..+.+.+|+++.|.|.+.+.| .+.+.|+++. ..+ ... ...+..... .+... +.|..
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~--L~I~~ 84 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVF--LKMNS 84 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEE--EEESS
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEE--EEECC
Confidence 4567889999999999998865 5789999852 211 100 011222221 12222 23788
Q ss_pred CCCCCCeEEEEEEEeCCCc--eeEEEEEEEEcc
Q psy18191 197 KKDTDSGVYWCVARNELGF--ARSKNATLDVAG 227 (238)
Q Consensus 197 v~~~d~G~Y~C~a~N~~G~--~~s~~~~L~V~~ 227 (238)
++.+|+|.|.|.+.|..|. .....+.|.|..
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~ 117 (215)
T 1c5d_H 85 LQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSS 117 (215)
T ss_dssp CCGGGCEEEEEEECCSSSCSCCBCCCEEEEECS
T ss_pred CCcccCEEEEEEEecCCcccceEcCCEEEEecC
Confidence 8999999999999997532 111245777764
Done!