BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18203
(316 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BU8|A Chain A, Rat Pancreatic Lipase Related Protein 2
Length = 452
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 162/309 (52%), Gaps = 60/309 (19%)
Query: 2 VGCFS-------IPRRSVAPFGKKTPQSPEDIDTKFWLLTRENP--------TEPQFLKY 46
+GCFS + +R + F P SPEDIDT+F L T ENP TEP +K+
Sbjct: 8 LGCFSNDKPWAGMLQRPLKIF----PWSPEDIDTRFLLYTNENPNNYQKISATEPDTIKF 63
Query: 47 XXXXXXXXXXHFNVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDK 106
+F + R T+FI HGF G+D W +L K
Sbjct: 64 S---------NFQLDRKTRFIVHGFIDKGED--GW------------------LLDMCKK 94
Query: 107 RAVIEDVNVILVDWEKGAAGPSYALAATNTQIIGRQLALLILDM-VSFGADPQDIHIVGF 165
+E VN I VDW +G+ Y A+ NT+++G ++A L+ + G P+++H++G
Sbjct: 95 MFQVEKVNCICVDWRRGSR-TEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGH 153
Query: 166 SLGAHVAGYAGRGVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDG 225
SLGAHV G AGR ++ +GRITGLDPA P F+ L V L+ DA +VDVIH+D
Sbjct: 154 SLGAHVVGEAGRRLEGH---VGRITGLDPAEPCFQGL--PEEVRLDPSDAMFVDVIHTDS 208
Query: 226 ARHWSE-GLGLFEAIGHSDYFPNGGLDQPGCEHKKNAVLVS---HLEGTMNSSVVCNHIR 281
A G G+ + +GH D+FPNGG + PGC+ + +V EGT N V CNH+R
Sbjct: 209 APIIPYLGFGMSQKVGHLDFFPNGGKEMPGCQKNILSTIVDINGIWEGTQN-FVACNHLR 267
Query: 282 AWKLFYESL 290
++K + S+
Sbjct: 268 SYKYYASSI 276
>pdb|1LPA|B Chain B, Interfacial Activation Of The Lipase-Procolipase Complex
By Mixed Micelles Revealed By X-Ray Crystallography
pdb|1LPB|B Chain B, The 2.46 Angstroms Resolution Structure Of The Pancreatic
Lipase Colipase Complex Inhibited By A C11 Alkyl
Phosphonate
pdb|1N8S|A Chain A, Structure Of The Pancreatic Lipase-Colipase Complex
Length = 449
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 159/302 (52%), Gaps = 45/302 (14%)
Query: 1 KVGCFSIPRRSVAPFGKKT-------PQSPEDIDTKFWLLTRENPTEPQFLKYXXXXXXX 53
++GCFS +P+ T P SP+D++T+F L T ENP F +
Sbjct: 7 RLGCFS----DDSPWSGITERPLHILPWSPKDVNTRFLLYTNENPN--NFQEVAADSSSI 60
Query: 54 XXXHFNVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDKRAVIEDV 113
+F +R T+FI HGF G++ N+ + L ++ E V
Sbjct: 61 SGSNFKTNRKTRFIIHGFIDKGEENWLANVCKNLFKV--------------------ESV 100
Query: 114 NVILVDWEKGAAGPSYALAATNTQIIGRQLALLILDMVS-FGADPQDIHIVGFSLGAHVA 172
N I VDW KG + Y A+ N +I+G ++A + + S FG P ++H++G SLGAH A
Sbjct: 101 NCICVDW-KGGSRTGYTQASQNIRIVGAEVAYFVEFLQSAFGYSPSNVHVIGHSLGAHAA 159
Query: 173 GYAGRGVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHWSE- 231
G AGR IGRITGLDPA P F+ LV L+ DA +VDVIH+DGA
Sbjct: 160 GEAGRRTNGT---IGRITGLDPAEPCFQG--TPELVRLDPSDAKFVDVIHTDGAPIVPNL 214
Query: 232 GLGLFEAIGHSDYFPNGGLDQPGCEHKKNAVLVS---HLEGTMNSSVVCNHIRAWKLFYE 288
G G+ + +GH D+FPNGG++ PGC+ + +V EGT + + CNH+R++K + +
Sbjct: 215 GFGMSQVVGHLDFFPNGGVEMPGCKKNILSQIVDIDGIWEGTRDFA-ACNHLRSYKYYTD 273
Query: 289 SL 290
S+
Sbjct: 274 SI 275
>pdb|1W52|X Chain X, Crystal Structure Of A Proteolyzed Form Of Pancreatic
Lipase Related Protein 2 From Horse
Length = 452
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 163/329 (49%), Gaps = 53/329 (16%)
Query: 2 VGCFSIPRRSVAPFG---KKTPQSPEDIDTKFWLLTRENPTEPQFLKYXXXXXXXXXXHF 58
+GCFS + K P SPE+++T+F L T +NP Q + +F
Sbjct: 8 LGCFSDDKPWAGTLQRPLKSLPWSPEEVNTRFLLYTNKNPDSYQLIT-ARDVATIKSSNF 66
Query: 59 NVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDKRAVIEDVNVILV 118
SR T F+ HGF+ G+D ++ + +L++ E N I V
Sbjct: 67 QSSRKTHFVIHGFRDRGEDSWPSDMCKKILQV--------------------ETTNCISV 106
Query: 119 DWEKGAAGPSYALAATNTQIIGRQLALLILDMVS-FGADPQDIHIVGFSLGAHVAGYAGR 177
DW GA Y A N +I+G + A LI +++ +P+++HI+G SLGAH AG AGR
Sbjct: 107 DWSSGAKA-EYTQAVQNIRIVGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGR 165
Query: 178 GVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHW-SEGLGLF 236
++ + +GR+TGLDPA P F+ A+ V L+ DA +VDVIH+D + S G G+
Sbjct: 166 RLEGR---VGRVTGLDPAEPCFQD--ASEEVRLDPSDAQFVDVIHTDASPMLPSLGFGMS 220
Query: 237 EAIGHSDYFPNGGLDQPGCEHKKNAVLVSHLEGTMNSS---VVCNHIRAWKLFYESLKMS 293
+ +GH D+FPNGG PGC+ + + + G + + CNH+++++ + S+
Sbjct: 221 QKVGHMDFFPNGGKQMPGCKRSSFSTFID-INGIWQGAQDYLACNHLKSFEYYSSSILNP 279
Query: 294 K-------------QEDGCKFFAFHCPGG 309
QE+GC F CP G
Sbjct: 280 DGFLAYPCDSYDKFQENGC----FPCPAG 304
>pdb|1HPL|A Chain A, Horse Pancreatic Lipase. The Crystal Structure At 2.3
Angstroms Resolution
pdb|1HPL|B Chain B, Horse Pancreatic Lipase. The Crystal Structure At 2.3
Angstroms Resolution
Length = 449
Score = 160 bits (406), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 159/302 (52%), Gaps = 45/302 (14%)
Query: 1 KVGCFS-------IPRRSVAPFGKKTPQSPEDIDTKFWLLTRENPTEPQFLKYXXXXXXX 53
++GCFS I R + K P SPE ++T+F L T ENP F +
Sbjct: 7 RLGCFSDDSPWAGIVERPL----KILPWSPEKVNTRFLLYTNENPD--NFQEIVADPSTI 60
Query: 54 XXXHFNVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDKRAVIEDV 113
+FN R T+FI HGF G++ +W +ST M N K +E V
Sbjct: 61 QSSNFNTGRKTRFIIHGFIDKGEE--SW---------LST------MCQNMFK---VESV 100
Query: 114 NVILVDWEKGAAGPSYALAATNTQIIGRQLALLI-LDMVSFGADPQDIHIVGFSLGAHVA 172
N I VDW+ G+ +Y+ A+ N +I+G ++A L+ + SF P ++HI+G SLG+H A
Sbjct: 101 NCICVDWKSGSR-TAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAA 159
Query: 173 GYAGRGVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHWSE- 231
G AGR +GRITGLDPA P F+ LV L+ DA +VDVIH+D A
Sbjct: 160 GEAGRRTNGA---VGRITGLDPAEPCFQG--TPELVRLDPSDAQFVDVIHTDIAPFIPNL 214
Query: 232 GLGLFEAIGHSDYFPNGGLDQPGCEHKKNAVLVSHLEGTMNSS---VVCNHIRAWKLFYE 288
G G+ + GH D+FPNGG + PGC+ + +V ++G + CNH+R++K + +
Sbjct: 215 GFGMSQTAGHLDFFPNGGKEMPGCQKNVLSQIVD-IDGIWQGTRDFAACNHLRSYKYYTD 273
Query: 289 SL 290
S+
Sbjct: 274 SI 275
>pdb|1ETH|A Chain A, Triacylglycerol LipaseCOLIPASE COMPLEX
pdb|1ETH|C Chain C, Triacylglycerol LipaseCOLIPASE COMPLEX
Length = 448
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 153/302 (50%), Gaps = 45/302 (14%)
Query: 1 KVGCFSIPRRSVAPFG-------KKTPQSPEDIDTKFWLLTRENPTEPQFLKYXXXXXXX 53
++GCFS AP+ K P SP+D+DT+F L T +N Q L
Sbjct: 7 RLGCFS----DDAPWAGIVQRPLKILPWSPKDVDTRFLLYTNQNQNNYQEL--VADPSTI 60
Query: 54 XXXHFNVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDKRAVIEDV 113
+F + R T+FI HGF G++ NI + L ++ E V
Sbjct: 61 TNSNFRMDRKTRFIIHGFIDKGEEDWLSNICKNLFKV--------------------ESV 100
Query: 114 NVILVDWEKGAAGPSYALAATNTQIIGRQLALLILDM-VSFGADPQDIHIVGFSLGAHVA 172
N I VDW KG + Y A+ N +I+G ++A + + S G P ++H++G SLG+H A
Sbjct: 101 NCICVDW-KGGSRTGYTQASQNIRIVGAEVAYFVEVLKSSLGYSPSNVHVIGHSLGSHAA 159
Query: 173 GYAGRGVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHWSE- 231
G AGR I RITGLDPA P F+ LV L+ DA +VDVIH+D A
Sbjct: 160 GEAGRRTNGT---IERITGLDPAEPCFQG--TPELVRLDPSDAKFVDVIHTDAAPIIPNL 214
Query: 232 GLGLFEAIGHSDYFPNGGLDQPGCEHKKNAVLVS---HLEGTMNSSVVCNHIRAWKLFYE 288
G G+ + +GH D+FPNGG PGC+ + +V EGT + V CNH+R++K + +
Sbjct: 215 GFGMSQTVGHLDFFPNGGKQMPGCQKNILSQIVDIDGIWEGTRD-FVACNHLRSYKYYAD 273
Query: 289 SL 290
S+
Sbjct: 274 SI 275
>pdb|2PPL|A Chain A, Human Pancreatic Lipase-Related Protein 1
Length = 485
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 162/326 (49%), Gaps = 53/326 (16%)
Query: 2 VGCFSIPRRSVAPFG-------KKTPQSPEDIDTKFWLLTRENPTEPQFLKYXXXXXXXX 54
+GCFS P+G K P SPE I T+F L T ENP Q L
Sbjct: 33 LGCFS----DTEPWGGTAIRPLKILPWSPEKIGTRFLLYTNENPNNFQIL-LLSDPSTIE 87
Query: 55 XXHFNVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDKRAVIEDVN 114
+F + R T+FI HGF G + ++ + L E+ E+VN
Sbjct: 88 ASNFQMDRKTRFIIHGFIDKGDESWVTDMCKKLFEV--------------------EEVN 127
Query: 115 VILVDWEKGAAGPSYALAATNTQIIGRQLA-LLILDMVSFGADPQDIHIVGFSLGAHVAG 173
I VDW+KG+ +Y AA N +++G Q+A +L + + + P +H++G SLGAHVAG
Sbjct: 128 CICVDWKKGSQA-TYTQAANNVRVVGAQVAQMLDILLTEYSYPPSKVHLIGHSLGAHVAG 186
Query: 174 YAGRGVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHWS-EG 232
AG +K + RITGLDP F V L+ DA +VDVIH+D A G
Sbjct: 187 EAG----SKTPGLSRITGLDPVEASFES--TPEEVRLDPSDADFVDVIHTDAAPLIPFLG 240
Query: 233 LGLFEAIGHSDYFPNGGLDQPGCEHKKNAV-LVSHLEGTMNSS---VVCNHIRAWKLFYE 288
G + +GH D+FPNGG PGC KKNA+ + L+G + V CNH+R++K + E
Sbjct: 241 FGTNQQMGHLDFFPNGGESMPGC--KKNALSQIVDLDGIWAGTRDFVACNHLRSYKYYLE 298
Query: 289 SLKMSKQEDGCKFFAFHCPGGLKSFK 314
S+ DG F A+ C KSF+
Sbjct: 299 SI---LNPDG--FAAYPC-TSYKSFE 318
>pdb|1GPL|A Chain A, Rp2 Lipase
Length = 432
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 158/326 (48%), Gaps = 67/326 (20%)
Query: 2 VGCFSIPR----RSVAPFGKKTPQSPEDIDTKFWLLTRENPTEPQFLKYXXXXXXXXXXH 57
+GCFS + S P K P P+ I+T+F L T EN Q + +
Sbjct: 8 LGCFSDEKPWAGTSQRPI-KSLPSDPKKINTRFLLYTNENQNSYQLIT-ATDIATIKASN 65
Query: 58 FNVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDKRAVIEDVNVIL 117
FN++R T+FI HGF SG++ ++ + + ++ E VN I
Sbjct: 66 FNLNRKTRFIIHGFTDSGENSWLSDMCKNMFQV--------------------EKVNCIC 105
Query: 118 VDWEKGAAGPSYALAATNTQIIGRQLALLILDM-VSFGADPQDIHIVGFSLGAHVAGYAG 176
VDW KG + Y+ A+ N +++G ++A L+ + S P+++HI+G SLGAH AG AG
Sbjct: 106 VDW-KGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAG 164
Query: 177 RGVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHW-SEGLGL 235
+ + +GRITGLDPA P F+ V L+ DA +VDVIH+D + S G G+
Sbjct: 165 KRLNGL---VGRITGLDPAEPYFQD--TPEEVRLDPSDAKFVDVIHTDISPILPSLGFGM 219
Query: 236 FEAIGHSDYFPNGGLDQPGCEHKKNAVLVSHLEGTMNSSVVCNHIRAWKLFYESLKMSK- 294
+ +GH D+FPNGG D PGC+ + + CNH R+ + ++ S+ +
Sbjct: 220 SQKVGHMDFFPNGGKDMPGCK----------------TGISCNHHRSIEYYHSSILNPEG 263
Query: 295 ------------QEDGCKFFAFHCPG 308
QE GC F CP
Sbjct: 264 FLGYPCASYDEFQESGC----FPCPA 285
>pdb|1RP1|A Chain A, Dog Pancreatic Lipase Related Protein 1
Length = 450
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 155/300 (51%), Gaps = 41/300 (13%)
Query: 1 KVGCFSIPR----RSVAPFGKKTPQSPEDIDTKFWLLTRENPTEPQFLKYXXXXXXXXXX 56
++GCFS ++ P K P SPE I T+F L T +NP Q L
Sbjct: 7 QIGCFSDAEPWAGTAIRPL-KVLPWSPERIGTRFLLYTNKNPNNFQTL-LPSDPSTIGAS 64
Query: 57 HFNVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDKRAVIEDVNVI 116
+F + T+FI HGF G++ ++ + + ++ E+VN I
Sbjct: 65 NFQTDKKTRFIIHGFIDKGEENWLLDMCKNMFKV--------------------EEVNCI 104
Query: 117 LVDWEKGAAGPSYALAATNTQIIGRQLA-LLILDMVSFGADPQDIHIVGFSLGAHVAGYA 175
VDW+KG+ SY AA N +++G Q+A +L + ++ P + ++G SLGAHVAG A
Sbjct: 105 CVDWKKGSQT-SYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEA 163
Query: 176 GRGVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHWS-EGLG 234
G ++ +GRITGLDP F+ V L+ DA +VDVIH+D A G G
Sbjct: 164 G----SRTPGLGRITGLDPVEASFQG--TPEEVRLDPTDADFVDVIHTDAAPLIPFLGFG 217
Query: 235 LFEAIGHSDYFPNGGLDQPGCEHKKNAV-LVSHLEGTMNSS---VVCNHIRAWKLFYESL 290
+ +GH D+FPNGG + PGC KKNA+ + L+G + V CNH+R++K + ES+
Sbjct: 218 TSQQMGHLDFFPNGGEEMPGC--KKNALSQIVDLDGIWEGTRDFVACNHLRSYKYYSESI 275
>pdb|2OXE|A Chain A, Structure Of The Human Pancreatic Lipase-Related Protein 2
pdb|2OXE|B Chain B, Structure Of The Human Pancreatic Lipase-Related Protein 2
Length = 466
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 38/299 (12%)
Query: 1 KVGCFSIPRRSVAPFGKKT---PQSPEDIDTKFWLLTRENPTEPQFLKYXXXXXXXXXXH 57
++GCFS + + P SPEDIDT+F L T ENP Q + +
Sbjct: 9 QLGCFSDEKPWAGTLQRPVKLLPWSPEDIDTRFLLYTNENPNNFQLIT-GTEPDTIEASN 67
Query: 58 FNVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDKRAVIEDVNVIL 117
F + R T+FI HGF +D ++ + + E+ E VN I
Sbjct: 68 FQLDRKTRFIIHGFLDKAEDSWPSDMCKKMFEV--------------------EKVNCIC 107
Query: 118 VDWEKGAAGPSYALAATNTQIIGRQLALLILDM-VSFGADPQDIHIVGFSLGAHVAGYAG 176
VDW G+ Y A N +++G + A LI + G +D+H++G SLGAH A AG
Sbjct: 108 VDWRHGSRA-MYTQAVQNIRVVGAETAFLIQALSTQLGYSLEDVHVIGHSLGAHTAAEAG 166
Query: 177 RGVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHW-SEGLGL 235
R + + +GRITGLDPA P F+ V L+ DA +VDVIH+D + S G G+
Sbjct: 167 RRLGGR---VGRITGLDPAGPCFQD--EPEEVRLDPSDAVFVDVIHTDSSPIVPSLGFGM 221
Query: 236 FEAIGHSDYFPNGGLDQPGCEHKKNAV-LVSHLEGT---MNSSVVCNHIRAWKLFYESL 290
+ +GH D+FPNGG + PGC KKN + ++ ++G + V CNH+R+++ + S+
Sbjct: 222 SQKVGHLDFFPNGGKEMPGC--KKNVLSTITDIDGIWEGIGGFVSCNHLRSFEYYSSSV 278
>pdb|2PVS|A Chain A, Structure Of Human Pancreatic Lipase Related Protein 2
Mutant N336q
pdb|2PVS|B Chain B, Structure Of Human Pancreatic Lipase Related Protein 2
Mutant N336q
Length = 452
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 38/299 (12%)
Query: 1 KVGCFSIPRRSVAPFGKKT---PQSPEDIDTKFWLLTRENPTEPQFLKYXXXXXXXXXXH 57
++GCFS + + P SPEDIDT+F L T ENP Q + +
Sbjct: 7 QLGCFSDEKPWAGTLQRPVKLLPWSPEDIDTRFLLYTNENPNNFQLIT-GTEPDTIEASN 65
Query: 58 FNVSRPTKFIAHGFKGSGKDRGAWNIVEALLEIVSTDLENFQMLSNYDKRAVIEDVNVIL 117
F + R T+FI HGF +D ++ + + E+ E VN I
Sbjct: 66 FQLDRKTRFIIHGFLDKAEDSWPSDMCKKMFEV--------------------EKVNCIC 105
Query: 118 VDWEKGAAGPSYALAATNTQIIGRQLALLILDM-VSFGADPQDIHIVGFSLGAHVAGYAG 176
VDW G+ Y A N +++G + A LI + G +D+H++G SLGAH A AG
Sbjct: 106 VDWRHGSRA-MYTQAVQNIRVVGAETAFLIQALSTQLGYSLEDVHVIGHSLGAHTAAEAG 164
Query: 177 RGVQNKGFKIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHW-SEGLGL 235
R + + +GRITGLDPA P F+ V L+ DA +VDVIH+D + S G G+
Sbjct: 165 RRLGGR---VGRITGLDPAGPCFQD--EPEEVRLDPSDAVFVDVIHTDSSPIVPSLGFGM 219
Query: 236 FEAIGHSDYFPNGGLDQPGCEHKKNAV-LVSHLEGT---MNSSVVCNHIRAWKLFYESL 290
+ +GH D+FPNGG + PGC KKN + ++ ++G + V CNH+R+++ + S+
Sbjct: 220 SQKVGHLDFFPNGGKEMPGC--KKNVLSTITDIDGIWEGIGGFVSCNHLRSFEYYSSSV 276
>pdb|1F8U|A Chain A, Crystal Structure Of Mutant E202q Of Human
Acetylcholinesterase Complexed With Green Mamba Venom
Peptide Fasciculin-ii
Length = 583
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 101 LSNYDKRAVIEDVNVILV--DWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R +++ +LV ++ GA G P A N ++ ++LAL + ++ +
Sbjct: 130 LDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPGNVGLLDQRLALQWVQENVAA 189
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 190 FGGDPTSVTLFGQSAGAASVG 210
>pdb|4EY4|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY4|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY5|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY5|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY6|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY6|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY7|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY7|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY8|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Fasciculin-2
Length = 542
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 101 LSNYDKRAVIEDVNVILV--DWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R +++ +LV ++ GA G P A N ++ ++LAL + ++ +
Sbjct: 129 LDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPGNVGLLDQRLALQWVQENVAA 188
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 189 FGGDPTSVTLFGESAGAASVG 209
>pdb|3LII|A Chain A, Recombinant Human Acetylcholinesterase
pdb|3LII|B Chain B, Recombinant Human Acetylcholinesterase
Length = 540
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 101 LSNYDKRAVIEDVNVILV--DWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R +++ +LV ++ GA G P A N ++ ++LAL + ++ +
Sbjct: 127 LDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPGNVGLLDQRLALQWVQENVAA 186
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 187 FGGDPTSVTLFGESAGAASVG 207
>pdb|1B41|A Chain A, Human Acetylcholinesterase Complexed With Fasciculin-Ii,
Glycosylated Protein
Length = 539
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 101 LSNYDKRAVIEDVNVILV--DWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R +++ +LV ++ GA G P A N ++ ++LAL + ++ +
Sbjct: 126 LDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPGNVGLLDQRLALQWVQENVAA 185
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 186 FGGDPTSVTLFGESAGAASVG 206
>pdb|2FOK|A Chain A, Structure Of Restriction Endonuclease Foki
pdb|2FOK|B Chain B, Structure Of Restriction Endonuclease Foki
Length = 579
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 217 YVDVIHSDGARHWSEGLGLFEAIGHSDYF 245
Y+D SDG W+ LG E I SD F
Sbjct: 101 YIDNWSSDGFLRWAHALGFIEYINKSDSF 129
>pdb|1FOK|A Chain A, Structure Of Restriction Endonuclease Foki Bound To Dna
Length = 576
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 217 YVDVIHSDGARHWSEGLGLFEAIGHSDYF 245
Y+D SDG W+ LG E I SD F
Sbjct: 98 YIDNWSSDGFLRWAHALGFIEYINKSDSF 126
>pdb|2X8B|A Chain A, Crystal Structure Of Human Acetylcholinesterase Inhibited
By Aged Tabun And Complexed With Fasciculin-Ii
Length = 583
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKRAVIEDVNVILV--DWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R +++ +LV ++ GA G P A N ++ ++LAL + ++ +
Sbjct: 130 LDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPGNVGLLDQRLALQWVQENVAA 189
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G GA G
Sbjct: 190 FGGDPTSVTLFGEXAGAASVG 210
>pdb|3BJR|A Chain A, Crystal Structure Of A Putative Carboxylesterase (Lp_1002)
From Lactobacillus Plantarum Wcfs1 At 2.09 A Resolution
Length = 283
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 139 IGRQLALLILDMVSFGADPQDIHIVGFSLGAHVAG 173
+GR + LL + DPQ I GFS+G H+
Sbjct: 105 LGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVA 139
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 130 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 190 FGGDPMSVTLFGESAGAASVG 210
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 130 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 190 FGGDPMSVTLFGESAGAASVG 210
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 130 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 190 FGGDPMSVTLFGESAGAASVG 210
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 130 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 190 FGGDPMSVTLFGESAGAASVG 210
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 130 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 190 FGGDPMSVTLFGESAGAASVG 210
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 161 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 220
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 221 FGGDPMSVTLFGESAGAASVG 241
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 130 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 190 FGGDPMSVTLFGESAGAASVG 210
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 130 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 190 FGGDPMSVTLFGESAGAASVG 210
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 126 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 185
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 186 FGGDPMSVTLFGESAGAASVG 206
>pdb|2DRH|A Chain A, Crystal Structure Of The Ph0078 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DRH|B Chain B, Crystal Structure Of The Ph0078 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DRH|C Chain C, Crystal Structure Of The Ph0078 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DRH|D Chain D, Crystal Structure Of The Ph0078 Protein From Pyrococcus
Horikoshii Ot3
Length = 361
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Query: 109 VIEDVNVILVDWEKGAAGPSYALAATN-----------TQIIGRQLALLILDMVSFGADP 157
V+E + D+E+GA G ++A +I G++ + L + +FG
Sbjct: 154 VVEAIKRADEDFEEGAVGAGTGMSAFEFKGGIGSASRIVEIEGKKYTVGALVLSNFGRR- 212
Query: 158 QDIHIVGFSLGAHVAGYAGRGVQNKG 183
+D+ I G +G + + GRG + KG
Sbjct: 213 EDLTIAGVPVGLELKNWPGRGGEGKG 238
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 127 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 186
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 187 FGGDPMSVTLFGESAGAASVG 207
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 101 LSNYDKR--AVIEDVNVILVDWEKGAAG----PSYALAATNTQIIGRQLALLIL--DMVS 152
L YD R A +E ++ +++ G G P A N ++ ++LAL + ++ +
Sbjct: 127 LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 186
Query: 153 FGADPQDIHIVGFSLGAHVAG 173
FG DP + + G S GA G
Sbjct: 187 FGGDPMSVTLFGESAGAASVG 207
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,913,965
Number of Sequences: 62578
Number of extensions: 407039
Number of successful extensions: 1000
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 924
Number of HSP's gapped (non-prelim): 33
length of query: 316
length of database: 14,973,337
effective HSP length: 99
effective length of query: 217
effective length of database: 8,778,115
effective search space: 1904850955
effective search space used: 1904850955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)