Query psy18207
Match_columns 293
No_of_seqs 240 out of 1279
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 16:29:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18207.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18207hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4367|consensus 100.0 1.2E-28 2.5E-33 233.2 13.9 170 115-286 519-699 (699)
2 KOG4367|consensus 99.8 1.5E-21 3.2E-26 185.2 8.0 81 9-89 604-698 (699)
3 smart00449 SPRY Domain in SPla 99.8 2.5E-20 5.5E-25 150.7 13.7 108 170-281 1-121 (122)
4 PF00622 SPRY: SPRY domain; I 99.8 1.2E-18 2.6E-23 140.6 10.7 109 170-282 1-123 (124)
5 KOG3953|consensus 99.4 1.6E-12 3.4E-17 115.7 12.5 145 132-278 27-195 (242)
6 KOG4030|consensus 98.9 2.6E-08 5.7E-13 83.9 13.7 138 131-279 28-176 (197)
7 KOG2626|consensus 98.9 1.1E-08 2.4E-13 100.4 9.9 146 133-281 294-493 (544)
8 smart00449 SPRY Domain in SPla 98.8 7.2E-09 1.6E-13 83.4 6.7 67 7-76 29-98 (122)
9 KOG0349|consensus 98.7 5.3E-08 1.1E-12 94.2 9.2 143 132-282 89-244 (725)
10 PF13765 PRY: SPRY-associated 98.6 4E-08 8.6E-13 67.9 4.2 37 132-168 1-49 (49)
11 PF00622 SPRY: SPRY domain; I 98.6 9.9E-08 2.1E-12 76.5 5.5 66 8-76 31-99 (124)
12 smart00589 PRY associated with 98.0 5.3E-06 1.1E-10 57.1 3.9 38 131-168 3-52 (52)
13 KOG3953|consensus 97.9 1.9E-05 4.2E-10 70.8 5.2 68 6-76 101-175 (242)
14 KOG4030|consensus 97.8 2.4E-05 5.2E-10 66.2 4.1 64 9-77 92-158 (197)
15 KOG2243|consensus 97.1 0.0017 3.7E-08 70.0 8.4 113 165-281 1100-1226(5019)
16 KOG2177|consensus 96.7 0.0096 2.1E-07 53.3 8.8 135 132-271 207-365 (386)
17 PF07177 Neuralized: Neuralize 82.3 6.4 0.00014 28.9 6.3 61 133-194 3-66 (69)
18 KOG0349|consensus 75.3 3.1 6.6E-05 41.5 3.5 31 43-73 185-216 (725)
19 KOG2243|consensus 68.5 6.6 0.00014 44.1 4.4 55 9-68 1133-1188(5019)
20 smart00560 LamGL LamG-like jel 61.8 23 0.00049 28.7 5.6 26 46-71 63-88 (133)
21 PF13385 Laminin_G_3: Concanav 56.6 28 0.00062 27.4 5.3 57 13-71 47-110 (157)
22 cd00152 PTX Pentraxins are pla 45.0 72 0.0016 27.8 6.4 23 48-70 94-116 (201)
23 KOG1477|consensus 40.5 35 0.00075 34.4 4.1 116 170-287 78-208 (469)
24 PF15409 PH_8: Pleckstrin homo 39.1 25 0.00054 27.3 2.2 18 51-68 19-36 (89)
25 PF10665 Minor_capsid_1: Minor 36.2 90 0.002 25.2 5.1 48 131-179 63-113 (114)
26 PF06373 CART: Cocaine and amp 32.4 22 0.00047 26.4 0.8 19 42-60 46-64 (73)
27 PF07545 Vg_Tdu: Vestigial/Ton 28.9 10 0.00022 23.9 -1.1 13 1-14 20-32 (33)
28 PF14832 Tautomerase_3: Putati 28.2 77 0.0017 26.4 3.6 28 48-77 39-66 (136)
29 PF06674 DUF1176: Protein of u 27.6 1.4E+02 0.0029 28.7 5.7 66 10-75 10-89 (340)
30 PF11393 IcmL: Macrophage kill 26.1 67 0.0014 25.5 2.8 19 161-179 86-104 (108)
31 PRK10708 hypothetical protein; 22.2 2.3E+02 0.0049 20.3 4.4 29 48-76 17-50 (62)
32 smart00159 PTX Pentraxin / C-r 21.5 3.2E+02 0.007 23.8 6.5 22 48-69 94-115 (206)
33 PRK00802 3-methyladenine DNA g 21.2 67 0.0014 28.4 2.0 56 7-68 129-185 (188)
No 1
>KOG4367|consensus
Probab=99.96 E-value=1.2e-28 Score=233.17 Aligned_cols=170 Identities=32% Similarity=0.563 Sum_probs=155.5
Q ss_pred CchhhHHHHHhhcceeeeEeCCCCCCCCeEEeCCCcEEEEcccCceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEe
Q psy18207 115 FGIARLDVARDEMLVAWFTMDPGRSAPDLFFSPEHTTVTCDGYEHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIAR 194 (293)
Q Consensus 115 ~~~~~~~~~l~~~~~~~~tlDp~ta~~~L~lS~d~~tv~~~~~~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~ 194 (293)
++|+. ..+|++.+++||.|+|..++..++||+++.+++..+.+++.|||+.+|+.|.|||||.+++.++..+..+|||.
T Consensus 519 s~ys~-tl~lqts~vawfqlt~spsqrdmilsnecatlsgssleyrtilgsiafskgvhywevtidrhdgnsdivigvaq 597 (699)
T KOG4367|consen 519 SPYSK-TLVLQTSEVAWFQLTPSPSQRDMILSNECATLSGSSLEYRTILGSIAFSKGVHYWEVTIDRHDGNSDIVIGVAQ 597 (699)
T ss_pred Ccccc-eeEeeecceeeeeccCCchhhceeeecccceecccccchheeeeecccccceeEEEEEEeccCCCCCceEEecc
Confidence 45555 56789999999999999999999999999999999889999999999999999999999999888999999999
Q ss_pred ccccccccccCCCcEEEEEEcCCc---------CccccCCCCCe--EEEEEeCCCCCEEEEEeeCCCCCceEEcCCCCcE
Q psy18207 195 LDVARDEMLVKHRDLFAVLATCSR---------YSRLVRGIPDL--FAVFATCSRYSRLVRGIPDLFAGPIAFHNLYGVF 263 (293)
Q Consensus 195 ~s~~r~~~lg~~~~sW~l~~~~~~---------~~~~~~~~~~~--IGV~LD~e~~G~LSFY~n~~~~g~~tF~~f~g~l 263 (293)
..++|+..+|.+...|++|.++.+ +++..+++..+ |||.|||++ |++.|+.|+...+.++|++..|-+
T Consensus 598 pavnrnvmlgkdlhgwsmyvdgerswylhnethhnrvlggvtrgtvigvrldcdr-gtmeytvndrqddsmaftnmrgly 676 (699)
T KOG4367|consen 598 PAVNRNVMLGKDLHGWSMYVDGERSWYLHNETHHNRVLGGVTRGTVIGVRLDCDR-GTMEYTVNDRQDDSMAFTNMRGLY 676 (699)
T ss_pred hhhhhceeecccccceeEEEcCcceeEEeccccccccccccccccEEEEEEeccC-CceEEEeccccCCceeeeccccee
Confidence 999999999999999999998876 55666677666 999999999 999999988777779999999999
Q ss_pred EEEEEcCCCCeEEEEcCCCCChh
Q psy18207 264 YPAVSLNRGVTVTLHTGLEVPPE 286 (293)
Q Consensus 264 yP~Fsl~~g~~ltL~~g~~~P~~ 286 (293)
||||+++...+||+++|++.|+.
T Consensus 677 ypafsvnanssitvhtglsspss 699 (699)
T KOG4367|consen 677 YPAFSVNANSSITVHTGLSSPSS 699 (699)
T ss_pred eeeeEeccCceEEEecCCCCCCC
Confidence 99999999999999999999973
No 2
>KOG4367|consensus
Probab=99.85 E-value=1.5e-21 Score=185.23 Aligned_cols=81 Identities=37% Similarity=0.700 Sum_probs=75.5
Q ss_pred hhcCCCCCceEEEEcCCceeeeecCccccccccccccCCEEEEEEecCCCeeEEEEcCcCCc--eeeee-----------
Q psy18207 9 HEAGKDDKAWSMYIDKQRSWFMHASIHDQRTEGGISQGSTVGVLLDLDRHLLRFFVNDEPQP--NFYNI----------- 75 (293)
Q Consensus 9 ~~lg~~~~~W~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~vGV~ld~~~g~lsfy~~~~~~~--~~~~~----------- 75 (293)
-|||||.++|+||.|++|+||+||+.|+||+.||+.+|.+|||+||+++|++.|+|||++++ ||+|.
T Consensus 604 vmlgkdlhgwsmyvdgerswylhnethhnrvlggvtrgtvigvrldcdrgtmeytvndrqddsmaftnmrglyypafsvn 683 (699)
T KOG4367|consen 604 VMLGKDLHGWSMYVDGERSWYLHNETHHNRVLGGVTRGTVIGVRLDCDRGTMEYTVNDRQDDSMAFTNMRGLYYPAFSVN 683 (699)
T ss_pred eeecccccceeEEEcCcceeEEeccccccccccccccccEEEEEEeccCCceEEEeccccCCceeeecccceeeeeeEec
Confidence 48999999999999999999999999999999999999999999999999999999999997 88773
Q ss_pred -cceeeeeecccccc
Q psy18207 76 -SNRLVAHTVPDILL 89 (293)
Q Consensus 76 -~~~~~~~~~~~~~~ 89 (293)
.+.+++||++..|.
T Consensus 684 anssitvhtglssps 698 (699)
T KOG4367|consen 684 ANSSITVHTGLSSPS 698 (699)
T ss_pred cCceEEEecCCCCCC
Confidence 36679999998875
No 3
>smart00449 SPRY Domain in SPla and the RYanodine Receptor. Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.
Probab=99.84 E-value=2.5e-20 Score=150.65 Aligned_cols=108 Identities=23% Similarity=0.315 Sum_probs=83.4
Q ss_pred cCeEEEEEEEeeeCCCCCeEEEEEeccccc--cccccCCCcEEEEEEcCCc--Cccc--c--CCC---CCeEEEEEeCCC
Q psy18207 170 KGAHYWEFVIDRYDSDTDPSFGIARLDVAR--DEMLVKHRDLFAVLATCSR--YSRL--V--RGI---PDLFAVFATCSR 238 (293)
Q Consensus 170 sGrHYWEVeV~~~~~~~~w~vGVa~~s~~r--~~~lg~~~~sW~l~~~~~~--~~~~--~--~~~---~~~IGV~LD~e~ 238 (293)
+|+|||||+|. .++.|.||||+++++| ...+|.+..+|++...+.. +... . ... +..|||+||++.
T Consensus 1 sG~~YwEV~v~---~~~~~~vGv~~~~~~r~~~~~~G~~~~sw~~~~~~g~~~~~~~~~~~~~~~~~~gd~iGv~lD~~~ 77 (122)
T smart00449 1 SGRHYFEVEIF---DGGHWRVGVATKSVPRGYFALLGEDKGSWGYDGDGGKKYHNSTGPEYGLPLQEPGDVIGCFLDLEA 77 (122)
T ss_pred CCcEEEEEEEc---CCCeEEEEEEcCccCCCccccCCCCCCEEEEEcCCCcEEeCCCCCccCccccCCCCEEEEEEECCC
Confidence 69999999998 3568999999999986 4668888999999875522 1111 1 111 223999999999
Q ss_pred CCEEEEEeeCCCCCceEEc--CCCCcEEEEEEcCCCCeEEEEcCC
Q psy18207 239 YSRLVRGIPDLFAGPIAFH--NLYGVFYPAVSLNRGVTVTLHTGL 281 (293)
Q Consensus 239 ~G~LSFY~n~~~~g~~tF~--~f~g~lyP~Fsl~~g~~ltL~~g~ 281 (293)
|+|+||+|+...+.++|. +|.+++||+|++..+..++++.|.
T Consensus 78 -g~l~F~~ng~~~~~~~f~~~~~~~~l~P~~~~~~~~~~~~n~g~ 121 (122)
T smart00449 78 -GTISFYKNGKYLHGLAFFDVKFSGPLYPAVSLGSGCSVRLNFGP 121 (122)
T ss_pred -CEEEEEECCCEeeeEEEeccCCCCcEeeEEEcCCCCEEEEEecC
Confidence 999999888766336785 478999999999877788888764
No 4
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin []. Ca2+-release from the sarcoplasmic or endoplasmic reticulum, the intracellular Ca2+ store, is mediated by the ryanodine receptor (RyR) and/or the inositol trisphosphate receptor (IP3R).; GO: 0005515 protein binding; PDB: 2V24_A 3EK9_A 2AFJ_A 2IWG_E 3EMW_A 2WL1_A 3TOJ_B 2VOK_A 2VOL_B 2FNJ_A ....
Probab=99.78 E-value=1.2e-18 Score=140.55 Aligned_cols=109 Identities=23% Similarity=0.292 Sum_probs=81.4
Q ss_pred cCeEEEEEEEeeeCCCCCeEEEEEeccc---cccccccCCCcEEEEEEcC-Cc-Cc--ccc--C--CC-CCeEEEEEeCC
Q psy18207 170 KGAHYWEFVIDRYDSDTDPSFGIARLDV---ARDEMLVKHRDLFAVLATC-SR-YS--RLV--R--GI-PDLFAVFATCS 237 (293)
Q Consensus 170 sGrHYWEVeV~~~~~~~~w~vGVa~~s~---~r~~~lg~~~~sW~l~~~~-~~-~~--~~~--~--~~-~~~IGV~LD~e 237 (293)
||+|||||+|.. ...|.||||+++. .....++.+..+|++...+ .. +. ... . .. +..|||+||++
T Consensus 1 sG~~YwEV~v~~---~~~~~iGv~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dvIG~~lD~~ 77 (124)
T PF00622_consen 1 SGKHYWEVEVDS---GGSISIGVATSSASVSGDENLSGYDPFSWGFHGDGGKKYHGGTSEETGSPFQEPGDVIGCGLDLD 77 (124)
T ss_dssp SSEEEEEEEETG---GCTEEEEEEETTSEESSSTS-TTSSTTEEEEETTTTTEEESTSSSECSCTSSTTTSEEEEEEETT
T ss_pred CcCEEEEEEEec---CcCEEEEEeECccccCCccccCCccccceeeeccccccceeecccccccccccCCcEEEEEEeec
Confidence 699999999984 3459999999998 3334566677999997654 22 11 111 1 11 23399999999
Q ss_pred CCCEEEEEeeCCCCCceEEc--CCCCcEEEEEEcCCCCeEEEEcCCC
Q psy18207 238 RYSRLVRGIPDLFAGPIAFH--NLYGVFYPAVSLNRGVTVTLHTGLE 282 (293)
Q Consensus 238 ~~G~LSFY~n~~~~g~~tF~--~f~g~lyP~Fsl~~g~~ltL~~g~~ 282 (293)
. |+|+||+|+...+.++|+ ++.++|||+|++..+++++++.|..
T Consensus 78 ~-g~l~F~~ng~~~~~~~f~~~~~~~~l~P~v~~~~~~~~~~n~g~~ 123 (124)
T PF00622_consen 78 N-GELSFYKNGKFLGIYAFTDIDFSEPLYPAVSLGGGQSVELNFGQR 123 (124)
T ss_dssp T-TEEEEEETTEEEEEEEEESCTTSSSBEEEEEEESTSEEEEEEEC-
T ss_pred c-cEEEEEECCccceeEEEECCCCCCcEEEEEEecCCCEEEEEeCCC
Confidence 9 999999888765435887 3678999999998889999998875
No 5
>KOG3953|consensus
Probab=99.43 E-value=1.6e-12 Score=115.67 Aligned_cols=145 Identities=21% Similarity=0.249 Sum_probs=108.6
Q ss_pred eEeCCCCCCCCeEEeCCC-cEEEEccc--CceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEecccccc-----ccc
Q psy18207 132 FTMDPGRSAPDLFFSPEH-TTVTCDGY--EHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVARD-----EML 203 (293)
Q Consensus 132 ~tlDp~ta~~~L~lS~d~-~tv~~~~~--~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~r~-----~~l 203 (293)
..|+|+..+.++.+-.++ .++..... ....+.|..+|+.|+|+|||.+....-.+...||||++..+.. ..+
T Consensus 27 ~~w~~~drs~nv~vk~~~~~tfhrhpvaqstd~~rGk~g~~~g~h~w~i~w~~r~~GT~avVGIaTk~Aplha~gy~aLl 106 (242)
T KOG3953|consen 27 HGWSPSDRSLNVFVKLPDGLTFHRHPVAQSTDGIRGKRGYSRGRHAWEIAWPNRQRGTHAVVGIATKVAPLHAVGYTALL 106 (242)
T ss_pred hccCcccccceeEEecCCcceEEecCCccccccccceeeeccCceEEEEEecCCccCCcceEEEEcccCchhhhHHHHHh
Confidence 368899888888776555 77776532 2457999999999999999999864456789999999988875 357
Q ss_pred cCCCcEEEEEEcCCc--Cccc------------cCCCCCeEEEEEeCCCCCEEEEEeeCCCCCceEEcCC-CCcEEEEEE
Q psy18207 204 VKHRDLFAVLATCSR--YSRL------------VRGIPDLFAVFATCSRYSRLVRGIPDLFAGPIAFHNL-YGVFYPAVS 268 (293)
Q Consensus 204 g~~~~sW~l~~~~~~--~~~~------------~~~~~~~IGV~LD~e~~G~LSFY~n~~~~g~~tF~~f-~g~lyP~Fs 268 (293)
|.++.+|++.+..+. |+.. ...+|.+|+|.|||+. |+++|+.+++..| ++|..+ ..++||++|
T Consensus 107 Gs~~qswGw~l~~~~l~H~g~~~~~yp~~~~~p~~~vp~ri~viLDm~e-gtl~F~~~~e~LG-vAFRgL~~~~LYP~Vs 184 (242)
T KOG3953|consen 107 GSNSQSWGWDLGRNVLYHDGQVAGLYPALNRQPKYNVPDRILVILDMIE-GTLSFAADGEYLG-VAFRGLKDKKLYPAVS 184 (242)
T ss_pred CCCCCccceecccceeeecCccccccccccCCchhcCCceEEEEEeecc-ceEEEEECCeEEe-eeecCCCCCcceeeee
Confidence 999999998664432 2210 0123445999999999 9999998888777 799876 457999998
Q ss_pred cCCC-CeEEEE
Q psy18207 269 LNRG-VTVTLH 278 (293)
Q Consensus 269 l~~g-~~ltL~ 278 (293)
-..| ..+|+.
T Consensus 185 av~g~~Evtm~ 195 (242)
T KOG3953|consen 185 AVWGHCEVTMK 195 (242)
T ss_pred ehhcceeEEEE
Confidence 7444 455554
No 6
>KOG4030|consensus
Probab=98.94 E-value=2.6e-08 Score=83.86 Aligned_cols=138 Identities=15% Similarity=0.127 Sum_probs=103.5
Q ss_pred eeEeCCCCCCCCeEEeCCCcEEEEcccCceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEecccccc-ccccCCCcE
Q psy18207 131 WFTMDPGRSAPDLFFSPEHTTVTCDGYEHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVARD-EMLVKHRDL 209 (293)
Q Consensus 131 ~~tlDp~ta~~~L~lS~d~~tv~~~~~~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~r~-~~lg~~~~s 209 (293)
.+.||.....+.++|-..+.++.-.+ .+|++..+..-+-|+||.+. ..+.|.||++.+..+.+ ...|.+..|
T Consensus 28 ~V~LD~~hMG~dVvilk~g~RicGtG----G~lAtaPlvQnKsYFevkiQ---~tG~WgiGlat~q~~l~~~p~g~d~~s 100 (197)
T KOG4030|consen 28 TVRLDVGHMGKDVVILKEGERICGTG----GALATAPLVQNKSYFEVKIQ---QTGTWGIGLATKQSPLDKVPGGCDEKS 100 (197)
T ss_pred cEEeehhccCCcEEEEecCcEEeccC----ceeeeeeeecccceEEEEEe---ecceeeeeeeeccCccccCCCCCccee
Confidence 46899999999988776677666543 48888888889999999997 45679999999887764 456788999
Q ss_pred EEEEEcCCc-Ccccc-C-----CCC-Ce--EEEEEeCCCCCEEEEEeeCCCCCceEEcCCCCcEEEEEEcCCCCeEEEEc
Q psy18207 210 FAVLATCSR-YSRLV-R-----GIP-DL--FAVFATCSRYSRLVRGIPDLFAGPIAFHNLYGVFYPAVSLNRGVTVTLHT 279 (293)
Q Consensus 210 W~l~~~~~~-~~~~~-~-----~~~-~~--IGV~LD~e~~G~LSFY~n~~~~g~~tF~~f~g~lyP~Fsl~~g~~ltL~~ 279 (293)
|++.-++.- |++.. . ..| .+ |||--|. =+|-||.|+.... .-|+...|++||.+.+..++-+-|..
T Consensus 101 w~~r~dga~~hnnee~~r~pa~~~p~EGDvVGvayDH---VELnfY~NGKn~e-~p~~gvRG~vyPvvYVddsAILD~~f 176 (197)
T KOG4030|consen 101 WGIRDDGAIAHNNEEVARMPATVFPEEGDVVGVAYDH---VELNFYVNGKNVE-DPITGVRGPVYPVVYVDDSAILDLKF 176 (197)
T ss_pred EEEccCCchhcccHHHhcCccccCCccCcEEEEEeee---EEEEEEEcCceec-ccccccccceeeEEEeCCceEEEEEe
Confidence 999655542 33221 1 122 23 9998664 4799999987654 46788899999999998887666654
No 7
>KOG2626|consensus
Probab=98.86 E-value=1.1e-08 Score=100.45 Aligned_cols=146 Identities=20% Similarity=0.258 Sum_probs=110.3
Q ss_pred EeCCCCCCCCeEEeCCCcEEEEcccCceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEeccccccccccCCCcEEEE
Q psy18207 133 TMDPGRSAPDLFFSPEHTTVTCDGYEHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVARDEMLVKHRDLFAV 212 (293)
Q Consensus 133 tlDp~ta~~~L~lS~d~~tv~~~~~~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~r~~~lg~~~~sW~l 212 (293)
.+.-....++|.||+|..+++-. .+++.|+++.++..|.+|+||.|++..+....++||...-.+.+..+|.+..++.+
T Consensus 294 ~l~~hdrA~ql~Is~drlt~tge-KGy~MvRAshgv~~G~WYFEI~vd~~pd~~a~RlGwsq~~g~LqApvGYdkfsY~w 372 (544)
T KOG2626|consen 294 NLSWHDRAEQLKISEDRLTATGE-KGYRMVRASHGVLEGAWYFEIKVDEMPDDAAIRLGWSQLYGNLQAPVGYDKFSYGW 372 (544)
T ss_pred hhhhhcccccccccccceeeecc-cceeeeeecccccccceeEEEEeecCCCccceeeeccccccccccccccccccccc
Confidence 34445667899999999999865 37889999999999999999999877777789999999988888889988766665
Q ss_pred EE-cCCc-Ccccc----CCCCCe--EEEEEeC--------------------------------------------CCCC
Q psy18207 213 LA-TCSR-YSRLV----RGIPDL--FAVFATC--------------------------------------------SRYS 240 (293)
Q Consensus 213 ~~-~~~~-~~~~~----~~~~~~--IGV~LD~--------------------------------------------e~~G 240 (293)
.- .|.+ |.... .+..++ ||.+++. .. .
T Consensus 373 Rdk~GtKfh~s~gk~Y~~gf~qGDvLGf~I~LP~~~~~~~~lp~~~kdk~lI~yK~~lyfe~~d~v~k~~k~l~~~pg-S 451 (544)
T KOG2626|consen 373 RDKKGTKFHESLGKHYSDGFGQGDVLGFYINLPKDLSPEKYLPLTHKDKFLIKYKGHLYFEDPDNVAKIEKTLKIKPG-S 451 (544)
T ss_pred cccCCcchhhhhhhhhhhhccCCceEEEEEecCCcccccccCCccccccceeeeeeeeEEEccchhhhhhhccccCCC-c
Confidence 32 2221 11100 011122 5555442 33 5
Q ss_pred EEEEEeeCCCCCceEEcC-C-CCcEEEEEEcCCCCeEEEEcCC
Q psy18207 241 RLVRGIPDLFAGPIAFHN-L-YGVFYPAVSLNRGVTVTLHTGL 281 (293)
Q Consensus 241 ~LSFY~n~~~~g~~tF~~-f-~g~lyP~Fsl~~g~~ltL~~g~ 281 (293)
.|.||.||..+| .+|.+ + .|..||++|+..++.++++.|.
T Consensus 452 ~I~f~KNG~~qG-~Ay~ni~~~G~YyPaIS~yks~tv~~nfGP 493 (544)
T KOG2626|consen 452 EIEFFKNGVSQG-VAYENIYKAGAYYPAISIYKSCTVKFNFGP 493 (544)
T ss_pred eEEEeecccchh-hhhhhhhccccccceeeecccceEEEeccc
Confidence 789999999888 69997 5 4899999999999999999887
No 8
>smart00449 SPRY Domain in SPla and the RYanodine Receptor. Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.
Probab=98.84 E-value=7.2e-09 Score=83.42 Aligned_cols=67 Identities=18% Similarity=0.368 Sum_probs=51.8
Q ss_pred hhhhcCCCCCceEEEEcCCceeeeecCcccccccccccc-CCEEEEEEecCCCeeEEEEcCcCC-c-eeeeec
Q psy18207 7 LKHEAGKDDKAWSMYIDKQRSWFMHASIHDQRTEGGISQ-GSTVGVLLDLDRHLLRFFVNDEPQ-P-NFYNIS 76 (293)
Q Consensus 7 ~~~~lg~~~~~W~~~~~~~~~~~~h~~~~~~~~~~~~~~-~~~vGV~ld~~~g~lsfy~~~~~~-~-~~~~~~ 76 (293)
..+++|.|..||++..++...|..+...+ ....... +++|||+||+++|+|+||.||+.+ + +|.+..
T Consensus 29 ~~~~~G~~~~sw~~~~~~g~~~~~~~~~~---~~~~~~~~gd~iGv~lD~~~g~l~F~~ng~~~~~~~f~~~~ 98 (122)
T smart00449 29 YFALLGEDKGSWGYDGDGGKKYHNSTGPE---YGLPLQEPGDVIGCFLDLEAGTISFYKNGKYLHGLAFFDVK 98 (122)
T ss_pred ccccCCCCCCEEEEEcCCCcEEeCCCCCc---cCccccCCCCEEEEEEECCCCEEEEEECCCEeeeEEEeccC
Confidence 35789999999999998876654444322 3345554 999999999999999999999998 5 775543
No 9
>KOG0349|consensus
Probab=98.71 E-value=5.3e-08 Score=94.23 Aligned_cols=143 Identities=18% Similarity=0.203 Sum_probs=100.4
Q ss_pred eEeCCCCCCCCeEEeCCCcEEEEccc-CceeEEeeeccC-cCeEEEEEEEeeeCCCCCeEEEEEeccccccccccCCCcE
Q psy18207 132 FTMDPGRSAPDLFFSPEHTTVTCDGY-EHRVALSVVGFS-KGAHYWEFVIDRYDSDTDPSFGIARLDVARDEMLVKHRDL 209 (293)
Q Consensus 132 ~tlDp~ta~~~L~lS~d~~tv~~~~~-~~~~VLg~~~fs-sGrHYWEVeV~~~~~~~~w~vGVa~~s~~r~~~lg~~~~s 209 (293)
-++++-.....|.|.+|+.....+.. ++...+++.++. .|+||+||.+. +++-.+||++.-..+.+ +|....+
T Consensus 89 w~mn~~Drg~alaI~~dGL~CqSre~KeWhGcRaT~Gl~gkGK~YyEvtit---d~GLCRVGWsT~qasLd--lGt~~~g 163 (725)
T KOG0349|consen 89 WKMNKQDRGLALAIDEDGLACQSREKKEWHGCRATAGLYGKGKYYYEVTIT---DKGLCRVGWSTLQASLD--LGTGLDG 163 (725)
T ss_pred cccCccccCceeeEcCCccccchhHHhhhhccccccccccCceEEEEEEec---cCceeeechhhcccccc--cCccccc
Confidence 36777777788899998876555432 455567777776 79999999997 56778999987544433 4555455
Q ss_pred EEEEEcCCcCccc---cCCCCCe----EEEEEeCCCCCEEEEEeeCCCCCceEEc-C--C-CCcEEEEEEcCCCCeEEEE
Q psy18207 210 FAVLATCSRYSRL---VRGIPDL----FAVFATCSRYSRLVRGIPDLFAGPIAFH-N--L-YGVFYPAVSLNRGVTVTLH 278 (293)
Q Consensus 210 W~l~~~~~~~~~~---~~~~~~~----IGV~LD~e~~G~LSFY~n~~~~g~~tF~-~--f-~g~lyP~Fsl~~g~~ltL~ 278 (293)
+++...|.++.+. ..+.+.. ||+|||.+. ++|+|.+|+...+ .+|+ + . .+.||||+-+- .+.++++
T Consensus 164 FGfGGTGkKS~nkqFDdYGe~Ft~~DvIGCyLDld~-~~v~fsKNG~~lg-~AF~ip~~~kn~~lfPAvvlk-Nael~fN 240 (725)
T KOG0349|consen 164 FGFGGTGKKSTNKQFDDYGEPFTLNDVIGCYLDLDS-RTVWFSKNGEQLG-AAFSIPVKYKNSNLFPAVVLK-NAELSFN 240 (725)
T ss_pred cccCccCccccccccccccCcccccceeeEEEeccC-ceEEEecCccccc-eeEEcChhhcccccchheeec-cceEEEe
Confidence 5554444432211 1233322 999999999 9999999999887 6896 2 2 57799998763 5678888
Q ss_pred cCCC
Q psy18207 279 TGLE 282 (293)
Q Consensus 279 ~g~~ 282 (293)
.|.+
T Consensus 241 FG~~ 244 (725)
T KOG0349|consen 241 FGSQ 244 (725)
T ss_pred cCCC
Confidence 7763
No 10
>PF13765 PRY: SPRY-associated domain; PDB: 3KB5_A 2VOK_A 2VOL_B 2FBE_B 2WL1_A 2IWG_E.
Probab=98.63 E-value=4e-08 Score=67.88 Aligned_cols=37 Identities=27% Similarity=0.469 Sum_probs=27.2
Q ss_pred eEeCCCCCCCCeEEeCCCcEEEEccc------------CceeEEeeecc
Q psy18207 132 FTMDPGRSAPDLFFSPEHTTVTCDGY------------EHRVALSVVGF 168 (293)
Q Consensus 132 ~tlDp~ta~~~L~lS~d~~tv~~~~~------------~~~~VLg~~~f 168 (293)
+||||+|||++|+||+|+++|++... .+.+|||+++|
T Consensus 1 ltlDp~TAh~~L~lS~d~k~v~~~~~~~~~p~~peRF~~~~~VLg~~~F 49 (49)
T PF13765_consen 1 LTLDPNTAHPSLVLSEDGKSVRYSEQPQNYPDNPERFDHWPQVLGSEGF 49 (49)
T ss_dssp -EB-TTTS-TTEEEETTSSEEEE-SST-S--S-TTS-SSSSEEEBS--B
T ss_pred CEECcccCCCCeEECCCCeEEEEccCCccCCCCCCccCCcCeEEECCCC
Confidence 58999999999999999999999652 14689999987
No 11
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin []. Ca2+-release from the sarcoplasmic or endoplasmic reticulum, the intracellular Ca2+ store, is mediated by the ryanodine receptor (RyR) and/or the inositol trisphosphate receptor (IP3R).; GO: 0005515 protein binding; PDB: 2V24_A 3EK9_A 2AFJ_A 2IWG_E 3EMW_A 2WL1_A 3TOJ_B 2VOK_A 2VOL_B 2FNJ_A ....
Probab=98.56 E-value=9.9e-08 Score=76.53 Aligned_cols=66 Identities=26% Similarity=0.378 Sum_probs=51.3
Q ss_pred hhhcCCCCCceEEEEcCCceeeeecCcccccccccccc-CCEEEEEEecCCCeeEEEEcCcCCc--eeeeec
Q psy18207 8 KHEAGKDDKAWSMYIDKQRSWFMHASIHDQRTEGGISQ-GSTVGVLLDLDRHLLRFFVNDEPQP--NFYNIS 76 (293)
Q Consensus 8 ~~~lg~~~~~W~~~~~~~~~~~~h~~~~~~~~~~~~~~-~~~vGV~ld~~~g~lsfy~~~~~~~--~~~~~~ 76 (293)
...+|.+..+|++..++...|..++..+ +...... +++|||+||+++|+|+||+||+.++ +|.+.+
T Consensus 31 ~~~~g~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~dvIG~~lD~~~g~l~F~~ng~~~~~~~f~~~~ 99 (124)
T PF00622_consen 31 ENLSGYDPFSWGFHGDGGKKYHGGTSEE---TGSPFQEPGDVIGCGLDLDNGELSFYKNGKFLGIYAFTDID 99 (124)
T ss_dssp TS-TTSSTTEEEEETTTTTEEESTSSSE---CSCTSSTTTSEEEEEEETTTTEEEEEETTEEEEEEEEESCT
T ss_pred cccCCccccceeeeccccccceeecccc---cccccccCCcEEEEEEeecccEEEEEECCccceeEEEECCC
Confidence 4578888899999988867666666533 4445555 9999999999999999999999977 665444
No 12
>smart00589 PRY associated with SPRY domains.
Probab=98.05 E-value=5.3e-06 Score=57.05 Aligned_cols=38 Identities=26% Similarity=0.417 Sum_probs=31.0
Q ss_pred eeEeCCCCCCCCeEEeCCCcEEEEccc------------CceeEEeeecc
Q psy18207 131 WFTMDPGRSAPDLFFSPEHTTVTCDGY------------EHRVALSVVGF 168 (293)
Q Consensus 131 ~~tlDp~ta~~~L~lS~d~~tv~~~~~------------~~~~VLg~~~f 168 (293)
.++|||+|||++|.||+|+++|++... .+.+|||.++|
T Consensus 3 ~vtld~~tA~~~l~lS~d~~~v~~~~~~~~~~~~~~rF~~~~~VL~~~~f 52 (52)
T smart00589 3 DVTLDPDTAHPYLLLSEDRRSVRYGDLKQSLPDNPERFDSYPCVLGSQGF 52 (52)
T ss_pred CCEECcccCCCCeEECCCCCEEEECCCCCCCCCCcccccCCCeEecCCcC
Confidence 569999999999999999999998632 12468888876
No 13
>KOG3953|consensus
Probab=97.87 E-value=1.9e-05 Score=70.80 Aligned_cols=68 Identities=16% Similarity=0.244 Sum_probs=54.5
Q ss_pred chhhhcCCCCCceEEEEcCCceeeeecCcc------ccccccccccCCEEEEEEecCCCeeEEEEcCcCCc-eeeeec
Q psy18207 6 HLKHEAGKDDKAWSMYIDKQRSWFMHASIH------DQRTEGGISQGSTVGVLLDLDRHLLRFFVNDEPQP-NFYNIS 76 (293)
Q Consensus 6 ~~~~~lg~~~~~W~~~~~~~~~~~~h~~~~------~~~~~~~~~~~~~vGV~ld~~~g~lsfy~~~~~~~-~~~~~~ 76 (293)
++..+||.|+.||..-+-+++ -+||+.- .+| .-....+.+|.|.||++.|||+|+.|++--| ||.+++
T Consensus 101 gy~aLlGs~~qswGw~l~~~~--l~H~g~~~~~yp~~~~-~p~~~vp~ri~viLDm~egtl~F~~~~e~LGvAFRgL~ 175 (242)
T KOG3953|consen 101 GYTALLGSNSQSWGWDLGRNV--LYHDGQVAGLYPALNR-QPKYNVPDRILVILDMIEGTLSFAADGEYLGVAFRGLK 175 (242)
T ss_pred HHHHHhCCCCCccceecccce--eeecCccccccccccC-CchhcCCceEEEEEeeccceEEEEECCeEEeeeecCCC
Confidence 467899999999999887766 5688622 122 1234568899999999999999999999999 998765
No 14
>KOG4030|consensus
Probab=97.79 E-value=2.4e-05 Score=66.19 Aligned_cols=64 Identities=25% Similarity=0.409 Sum_probs=51.7
Q ss_pred hhcCCCCCceEEEEcCCceeeeecCcccccccccc--ccCCEEEEEEecCCCeeEEEEcCcCCc-eeeeecc
Q psy18207 9 HEAGKDDKAWSMYIDKQRSWFMHASIHDQRTEGGI--SQGSTVGVLLDLDRHLLRFFVNDEPQP-NFYNISN 77 (293)
Q Consensus 9 ~~lg~~~~~W~~~~~~~~~~~~h~~~~~~~~~~~~--~~~~~vGV~ld~~~g~lsfy~~~~~~~-~~~~~~~ 77 (293)
--+|.|++||+|.-|+. -.||++..+|-+-.+ ..|++|||..|+- .|.||+||+..- -|++.|.
T Consensus 92 ~p~g~d~~sw~~r~dga---~~hnnee~~r~pa~~~p~EGDvVGvayDHV--ELnfY~NGKn~e~p~~gvRG 158 (197)
T KOG4030|consen 92 VPGGCDEKSWGIRDDGA---IAHNNEEVARMPATVFPEEGDVVGVAYDHV--ELNFYVNGKNVEDPITGVRG 158 (197)
T ss_pred CCCCCcceeEEEccCCc---hhcccHHHhcCccccCCccCcEEEEEeeeE--EEEEEEcCceeccccccccc
Confidence 35799999999986665 589999998866544 7799999999984 299999999864 5666665
No 15
>KOG2243|consensus
Probab=97.11 E-value=0.0017 Score=70.05 Aligned_cols=113 Identities=18% Similarity=0.176 Sum_probs=77.7
Q ss_pred eeccCcCeEEEEEEEeeeCCCCCeEEEEEeccccccccccCCCcEEEEEE-cCCc-Ccccc-C--CCCCe--EEEEEeCC
Q psy18207 165 VVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVARDEMLVKHRDLFAVLA-TCSR-YSRLV-R--GIPDL--FAVFATCS 237 (293)
Q Consensus 165 ~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~r~~~lg~~~~sW~l~~-~~~~-~~~~~-~--~~~~~--IGV~LD~e 237 (293)
+....+|++|+|.|+- ..+++.||+++..+..+..+|.++..+++.. .+++ |+... . ....+ ||+++|++
T Consensus 1100 syavkagkwyfefe~v---t~gdmrvgwarpgc~pd~elgadd~af~fdg~k~qrwhqg~~~~grswq~gdvvgcmi~l~ 1176 (5019)
T KOG2243|consen 1100 SYAVKAGKWYFEFETV---TAGDMRVGWARPGCQPDQELGADDQAFAFDGFKAQRWHQGNEHFGRSWQAGDVVGCMIDLD 1176 (5019)
T ss_pred hheeeccceEEEEEEe---eccceeecccCCCCCcchhhCCccceeeeccchhhhhhccccccccccCCCCeEEEEEecc
Confidence 3456789999999986 4568999999999999999999988888732 1222 22111 1 12234 99999999
Q ss_pred CCCEEEEEeeCC----CCC-ceEEcCC--CCcEEEEEEcCCCCeEEEEcCC
Q psy18207 238 RYSRLVRGIPDL----FAG-PIAFHNL--YGVFYPAVSLNRGVTVTLHTGL 281 (293)
Q Consensus 238 ~~G~LSFY~n~~----~~g-~~tF~~f--~g~lyP~Fsl~~g~~ltL~~g~ 281 (293)
. .+..|-.|++ +.| .++|.+| ..-+.|..+++-.+--+.+.|.
T Consensus 1177 d-~sm~ftlngeili~~~gselaf~d~di~~gfipic~lg~aqigrmn~g~ 1226 (5019)
T KOG2243|consen 1177 D-ASMIFTLNGEILIDDKGSELAFADFDIEDGFIPICCLGLAQIGRMNFGK 1226 (5019)
T ss_pred c-ceEEEEEcCeEEEcCCCCeeeeccccccCCceeeeehhhHhhcccccCC
Confidence 9 9999998875 333 5689865 4457788877543323333343
No 16
>KOG2177|consensus
Probab=96.68 E-value=0.0096 Score=53.31 Aligned_cols=135 Identities=17% Similarity=0.195 Sum_probs=83.6
Q ss_pred eEeCCCCCC----CCeEEeCCCcEEEEccc------------CceeEEeeeccCcCeEEE-EEEEeeeCCCCCeEEEEEe
Q psy18207 132 FTMDPGRSA----PDLFFSPEHTTVTCDGY------------EHRVALSVVGFSKGAHYW-EFVIDRYDSDTDPSFGIAR 194 (293)
Q Consensus 132 ~tlDp~ta~----~~L~lS~d~~tv~~~~~------------~~~~VLg~~~fssGrHYW-EVeV~~~~~~~~w~vGVa~ 194 (293)
+++++.+++ ..+.++++.+.+..... ....+++.+.|++|+||| ||++... ....|.+|++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 285 (386)
T KOG2177|consen 207 VTLDPDTANRQLEEFLLLSEDLRSVRSGALRQLEPDSPERFRLLPCVLGSQVFTSGRHYWEEVEVGLK-GKEEWDLGVCL 285 (386)
T ss_pred eecCccccccccccceeeccccceeecCCcCCCCCCCCCceeEEeEecccCccCccccceeEEeccCc-cCcchhhhhhh
Confidence 478999888 78889988888877531 023566679999999999 7777632 23579999999
Q ss_pred ccccc-cccccCCCcEEEEEEcCCc-CccccCCCCCe-EEEEEeCCCCC--EEEEEeeCCCCCceEEc--CCCCcEEEEE
Q psy18207 195 LDVAR-DEMLVKHRDLFAVLATCSR-YSRLVRGIPDL-FAVFATCSRYS--RLVRGIPDLFAGPIAFH--NLYGVFYPAV 267 (293)
Q Consensus 195 ~s~~r-~~~lg~~~~sW~l~~~~~~-~~~~~~~~~~~-IGV~LD~e~~G--~LSFY~n~~~~g~~tF~--~f~g~lyP~F 267 (293)
++... ........+.|........ ........+.. ..+.||++. + ..+|+ | .....+|. .|.+++.|.|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e~-~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~ 361 (386)
T KOG2177|consen 286 ESARKLLEPLSPESGFWLLGLLKSQSGKKYAASTPPLTQLVLLDYEA-GSLSISFY-N--GSLIYTFPKDSFSEPLRPVF 361 (386)
T ss_pred hccccccccccCcCceEEEeeecCCCCcceEEecCCccccccccccc-ceeEEEEe-C--CceeeeccccccCCCcCcee
Confidence 87222 2334455667877432200 00000001111 222299999 9 55566 3 12223554 3799999999
Q ss_pred EcCC
Q psy18207 268 SLNR 271 (293)
Q Consensus 268 sl~~ 271 (293)
++..
T Consensus 362 ~~~~ 365 (386)
T KOG2177|consen 362 SPGT 365 (386)
T ss_pred ecCc
Confidence 9854
No 17
>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i.e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.
Probab=82.25 E-value=6.4 Score=28.92 Aligned_cols=61 Identities=15% Similarity=0.270 Sum_probs=34.8
Q ss_pred EeCCCCCCCCeEEeCCCcEEEEcc-cCceeEEeeeccCcCeEEEEEEEeeeC--CCCCeEEEEEe
Q psy18207 133 TMDPGRSAPDLFFSPEHTTVTCDG-YEHRVALSVVGFSKGAHYWEFVIDRYD--SDTDPSFGIAR 194 (293)
Q Consensus 133 tlDp~ta~~~L~lS~d~~tv~~~~-~~~~~VLg~~~fssGrHYWEVeV~~~~--~~~~w~vGVa~ 194 (293)
.+-+++...++.|++|+++++... +....|..+..+..|.-+ +|++++.. -.+...+||..
T Consensus 3 ~FH~~~~G~nV~L~~~~~~A~R~~sf~~giVFS~rPl~~~E~~-~v~I~~~~~~wsG~L~~GvT~ 66 (69)
T PF07177_consen 3 RFHPNVHGKNVRLSNDGTVARRVSSFNNGIVFSSRPLRIGEKF-EVRIDEVEPSWSGSLRIGVTS 66 (69)
T ss_dssp -EEC-EE-TTEEE-SSS-EEEEST-SSS-EEEESS-B-TT-EE-EEEEEEE-SSSSS--EEEEES
T ss_pred cccCcccCCCEEEcCCCeEEEecccCCceEEEecCCccCCCEE-EEEEEecCCCceeEEEEeeEc
Confidence 456666788999999999998843 333468888888777554 78887642 22357788874
No 18
>KOG0349|consensus
Probab=75.30 E-value=3.1 Score=41.49 Aligned_cols=31 Identities=29% Similarity=0.427 Sum_probs=27.3
Q ss_pred cccCCEEEEEEecCCCeeEEEEcCcCCc-eee
Q psy18207 43 ISQGSTVGVLLDLDRHLLRFFVNDEPQP-NFY 73 (293)
Q Consensus 43 ~~~~~~vGV~ld~~~g~lsfy~~~~~~~-~~~ 73 (293)
....++||-|||++.++++|.-||++-| ||.
T Consensus 185 Ft~~DvIGCyLDld~~~v~fsKNG~~lg~AF~ 216 (725)
T KOG0349|consen 185 FTLNDVIGCYLDLDSRTVWFSKNGEQLGAAFS 216 (725)
T ss_pred ccccceeeEEEeccCceEEEecCccccceeEE
Confidence 3445799999999999999999999999 773
No 19
>KOG2243|consensus
Probab=68.55 E-value=6.6 Score=44.13 Aligned_cols=55 Identities=31% Similarity=0.467 Sum_probs=42.6
Q ss_pred hhcCCCCCceEEEEcCCceeeeecCcccccccc-ccccCCEEEEEEecCCCeeEEEEcCcC
Q psy18207 9 HEAGKDDKAWSMYIDKQRSWFMHASIHDQRTEG-GISQGSTVGVLLDLDRHLLRFFVNDEP 68 (293)
Q Consensus 9 ~~lg~~~~~W~~~~~~~~~~~~h~~~~~~~~~~-~~~~~~~vGV~ld~~~g~lsfy~~~~~ 68 (293)
+.||.|+...+. ++.+---||.+.. .-| .++.|++||-.+|++..++-|.+||+-
T Consensus 1133 ~elgadd~af~f--dg~k~qrwhqg~~---~~grswq~gdvvgcmi~l~d~sm~ftlngei 1188 (5019)
T KOG2243|consen 1133 QELGADDQAFAF--DGFKAQRWHQGNE---HFGRSWQAGDVVGCMIDLDDASMIFTLNGEI 1188 (5019)
T ss_pred hhhCCccceeee--ccchhhhhhcccc---ccccccCCCCeEEEEEecccceEEEEEcCeE
Confidence 568999988877 3333334785444 223 789999999999999999999999985
No 20
>smart00560 LamGL LamG-like jellyroll fold domain.
Probab=61.81 E-value=23 Score=28.70 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=22.0
Q ss_pred CCEEEEEEecCCCeeEEEEcCcCCce
Q psy18207 46 GSTVGVLLDLDRHLLRFFVNDEPQPN 71 (293)
Q Consensus 46 ~~~vGV~ld~~~g~lsfy~~~~~~~~ 71 (293)
=..|-+-.|-+.|+|.+||||++++.
T Consensus 63 W~hva~v~d~~~g~~~lYvnG~~~~~ 88 (133)
T smart00560 63 WVHLAGVYDGGAGKLSLYVNGVEVAT 88 (133)
T ss_pred EEEEEEEEECCCCeEEEEECCEEccc
Confidence 34788888999999999999998763
No 21
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A ....
Probab=56.58 E-value=28 Score=27.36 Aligned_cols=57 Identities=9% Similarity=0.213 Sum_probs=34.7
Q ss_pred CCCCceEEEEcCCceeeeecCccc-----cccccccccCC--EEEEEEecCCCeeEEEEcCcCCce
Q psy18207 13 KDDKAWSMYIDKQRSWFMHASIHD-----QRTEGGISQGS--TVGVLLDLDRHLLRFFVNDEPQPN 71 (293)
Q Consensus 13 ~~~~~W~~~~~~~~~~~~h~~~~~-----~~~~~~~~~~~--~vGV~ld~~~g~lsfy~~~~~~~~ 71 (293)
.+..+|.+++...+.+.+.-.... -.....+..+. .|.+-.| .+++.+||||+.++.
T Consensus 47 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~~~--~~~~~lyvnG~~~~~ 110 (157)
T PF13385_consen 47 SGSGGFGLFINNNGRLRFYIGNGGGGNYSFSSDSNLPDNKWHHLALTYD--GSTVTLYVNGELVGS 110 (157)
T ss_dssp SSSEEEEEEEETTSEEEEEETTSEEESS-EE-BS---TT-EEEEEEEEE--TTEEEEEETTEEETT
T ss_pred CCCCEEEEEEECCCEEEEEEeCCCceeEEEecCcccCCCCEEEEEEEEE--CCeEEEEECCEEEEe
Confidence 344589999887777755522221 00112233333 7888888 788999999998763
No 22
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity. CRP binds to ligands containing phosphocholine, SAP binds to amyloid fibrils, DNA, chromatin, fibronectin, C4-binding proteins and glycosaminoglycans. "Long" pentraxins have N-terminal extensions to the common pentraxin domain; one group, the neuronal pentraxins, may be involved in synapse formation and remodeling, and they may also be able to form heteromultimers.
Probab=44.98 E-value=72 Score=27.78 Aligned_cols=23 Identities=13% Similarity=0.196 Sum_probs=20.3
Q ss_pred EEEEEEecCCCeeEEEEcCcCCc
Q psy18207 48 TVGVLLDLDRHLLRFFVNDEPQP 70 (293)
Q Consensus 48 ~vGV~ld~~~g~lsfy~~~~~~~ 70 (293)
.|-|-.|-..|.+.+||||++++
T Consensus 94 hv~~t~d~~~g~~~lyvnG~~~~ 116 (201)
T cd00152 94 HICVTWESTSGIAELWVNGKLSV 116 (201)
T ss_pred EEEEEEECCCCcEEEEECCEEec
Confidence 67788888999999999999875
No 23
>KOG1477|consensus
Probab=40.55 E-value=35 Score=34.37 Aligned_cols=116 Identities=12% Similarity=-0.002 Sum_probs=65.4
Q ss_pred cCeEEEEEEEeeeCCCCCeEEEEEeccccccccccCCCcEEEEEEcCC-cCc-ccc------CCCCCe--EEEEEeCCCC
Q psy18207 170 KGAHYWEFVIDRYDSDTDPSFGIARLDVARDEMLVKHRDLFAVLATCS-RYS-RLV------RGIPDL--FAVFATCSRY 239 (293)
Q Consensus 170 sGrHYWEVeV~~~~~~~~w~vGVa~~s~~r~~~lg~~~~sW~l~~~~~-~~~-~~~------~~~~~~--IGV~LD~e~~ 239 (293)
.|.||+|+.+.+.--.+..+||-+..+++-....|....+|....+.. .++ ... ...... ||+=.+.-.
T Consensus 78 ~~~~~Fe~~i~d~g~~~~i~i~~~~~~~~~~~~~g~~~~s~~y~g~~g~l~~~~~~~~~~~~~~~~~~D~ig~~~~~~~- 156 (469)
T KOG1477|consen 78 FGIYYFEFDILDYGIEGRIKIGFLIDSFSIIESEGYTMNSLGYHGNSGLLDNGGAELGEEFGPTFTTGDEIGCGINEIT- 156 (469)
T ss_pred cccceeeeeHHHhhhhhceEEEEEecccccccccchhhhhhcccCCchhhhhhhhhhchhhcCCCCccceeeeccchhh-
Confidence 479999999875433344666666666665554554333555432111 111 111 011222 777777778
Q ss_pred CEEEEEeeCCCCCceEEcCCCCcEEEE-----EEcCCCCeEEEEcCCCCChhh
Q psy18207 240 SRLVRGIPDLFAGPIAFHNLYGVFYPA-----VSLNRGVTVTLHTGLEVPPEY 287 (293)
Q Consensus 240 G~LSFY~n~~~~g~~tF~~f~g~lyP~-----Fsl~~g~~ltL~~g~~~P~~~ 287 (293)
.++-|+.|+...+ .++..+...++|- +-+-++..|.++.|++.+-.|
T Consensus 157 q~i~~t~~g~~~~-~~~~~~~~~~~~~~~n~~~~~s~~~~I~~~~g~~~~~~f 208 (469)
T KOG1477|consen 157 QEIFFTKNGTEVG-EIIKPLSPDLLEENGNLAWLFSPNEEVEVNFGLEEEFRF 208 (469)
T ss_pred heeeeccCccccc-cccccccccccccccceeeEeccCceeeeeecCCCceee
Confidence 8998887765544 3666554444443 333456778888887655444
No 24
>PF15409 PH_8: Pleckstrin homology domain
Probab=39.11 E-value=25 Score=27.25 Aligned_cols=18 Identities=22% Similarity=0.617 Sum_probs=15.3
Q ss_pred EEEecCCCeeEEEEcCcC
Q psy18207 51 VLLDLDRHLLRFFVNDEP 68 (293)
Q Consensus 51 V~ld~~~g~lsfy~~~~~ 68 (293)
..||++.|+||+|.|...
T Consensus 19 FvL~~~~G~LsYy~~~~~ 36 (89)
T PF15409_consen 19 FVLDFEKGTLSYYRNQNS 36 (89)
T ss_pred EEEEcCCcEEEEEecCCC
Confidence 468999999999997654
No 25
>PF10665 Minor_capsid_1: Minor capsid protein; InterPro: IPR019612 This entry is represented by Bacteriophage A118, Gp9. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry represents a putative tail-knob protein from Listeria phage A118.
Probab=36.19 E-value=90 Score=25.21 Aligned_cols=48 Identities=25% Similarity=0.277 Sum_probs=32.4
Q ss_pred eeEeCCCCCCCCeEEeCCCcEEEEcccCce---eEEeeeccCcCeEEEEEEE
Q psy18207 131 WFTMDPGRSAPDLFFSPEHTTVTCDGYEHR---VALSVVGFSKGAHYWEFVI 179 (293)
Q Consensus 131 ~~tlDp~ta~~~L~lS~d~~tv~~~~~~~~---~VLg~~~fssGrHYWEVeV 179 (293)
-+-+|+..+.|-+.+++ +-++.+.+.++. +.-..+.|+..-|-|||+|
T Consensus 63 vlFida~~S~p~~~~~~-~skI~fdG~ey~V~~v~~~y~~~~n~v~~yEveV 113 (114)
T PF10665_consen 63 VLFIDAVNSNPFPDFTE-GSKIVFDGKEYTVTKVNPNYEPFSNKVHHYEVEV 113 (114)
T ss_pred EEEEecCcCccccccCC-CCEEEECCceEEEEEEEecccCCCCCcEEEEEEE
Confidence 35688888888888887 444666654432 2333446776779999997
No 26
>PF06373 CART: Cocaine and amphetamine regulated transcript protein (CART); InterPro: IPR009106 The cocaine and amphetamine regulated transcript (CART) is a brain-localised peptide that acts as a satiety factor in appetite regulation. CART was found to inhibit both normal and starvation-induced feeding, and completely blocks the feeding response induced by neuropeptide Y. CART is regulated by leptin in the hypothalamus, and can be transcriptionally induced after cocaine or amphetamine administration []. Posttranslational processing of CART produces an N-terminal CART peptide and a C-terminal CART peptide. The C-terminal CART peptide has been isolated from the hypothalamus, nucleus accumbens, and the anterior pituitary lobe in rats. C-terminal CART is the biologically active part of the molecule affecting food intake. The structure of C-terminal CART consists of a disulphide-bound fold containing a beta-hairpin and two adjacent disulphide bridges [].; GO: 0000186 activation of MAPKK activity, 0001678 cellular glucose homeostasis, 0007186 G-protein coupled receptor protein signaling pathway, 0008343 adult feeding behavior, 0009267 cellular response to starvation, 0032099 negative regulation of appetite, 0005615 extracellular space; PDB: 1HY9_A.
Probab=32.38 E-value=22 Score=26.40 Aligned_cols=19 Identities=26% Similarity=0.433 Sum_probs=10.8
Q ss_pred ccccCCEEEEEEecCCCee
Q psy18207 42 GISQGSTVGVLLDLDRHLL 60 (293)
Q Consensus 42 ~~~~~~~vGV~ld~~~g~l 60 (293)
.+.+|+|||=+.|+.+|+.
T Consensus 46 AvrkG~RIGklCdC~rG~~ 64 (73)
T PF06373_consen 46 AVRKGPRIGKLCDCPRGTS 64 (73)
T ss_dssp EEE-SSSEEE--B--TT--
T ss_pred hhccccccccccCCCCCCc
Confidence 5688999999999999974
No 27
>PF07545 Vg_Tdu: Vestigial/Tondu family; InterPro: IPR011520 The mammalian TEF and the Drosophila scalloped genes belong to a conserved family of transcriptional factors that possesses a TEA/ATTS DNA-binding domain. Transcriptional activation by these proteins likely requires interactions with specific coactivators. In Drosophila, Scalloped (Sd) interacts with Vestigial (Vg) to form a complex, which binds DNA through the Sd TEA/ATTS domain. The Sd-Vg heterodimer is a key regulator of wing development, which directly controls several target genes and is able to induce wing outgrowth when ectopically expressed. This short conserved region is needed for interaction with Sd [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 4EAZ_C.
Probab=28.89 E-value=10 Score=23.86 Aligned_cols=13 Identities=38% Similarity=0.680 Sum_probs=7.4
Q ss_pred CccccchhhhcCCC
Q psy18207 1 MVDELHLKHEAGKD 14 (293)
Q Consensus 1 ~~~~~~~~~~lg~~ 14 (293)
|||| ||.|.|.++
T Consensus 20 ~VDe-HFsRAL~~~ 32 (33)
T PF07545_consen 20 VVDE-HFSRALSHD 32 (33)
T ss_dssp HHHH-HHHCCS---
T ss_pred HHHH-HHHHHhccC
Confidence 3554 899998764
No 28
>PF14832 Tautomerase_3: Putative oxalocrotonate tautomerase enzyme; PDB: 3C6V_C 3N4D_I 3N4G_C 3N4H_A 2FLZ_C 3MF8_A 3MF7_A 2FLT_A.
Probab=28.18 E-value=77 Score=26.42 Aligned_cols=28 Identities=25% Similarity=0.432 Sum_probs=20.1
Q ss_pred EEEEEEecCCCeeEEEEcCcCCceeeeecc
Q psy18207 48 TVGVLLDLDRHLLRFFVNDEPQPNFYNISN 77 (293)
Q Consensus 48 ~vGV~ld~~~g~lsfy~~~~~~~~~~~~~~ 77 (293)
++=+|.|.+.+ +|||.|+|...|..+..
T Consensus 39 V~V~F~~~~~~--~~fvGG~~~~~fvrI~i 66 (136)
T PF14832_consen 39 VNVRFIEVPPG--DFFVGGKPRDNFVRIVI 66 (136)
T ss_dssp -EEEEEEE-TT--SEEETTEE-SSCEEEEE
T ss_pred EEEEEEEcCCC--CeEECCcCcCceEEEEE
Confidence 66678888888 89999999998755543
No 29
>PF06674 DUF1176: Protein of unknown function (DUF1176); InterPro: IPR009560 This family consists of several hypothetical bacterial proteins of around 340 residues in length. Members of this family contain six highly conserved cysteine residues. The function of this family is unknown.
Probab=27.58 E-value=1.4e+02 Score=28.68 Aligned_cols=66 Identities=11% Similarity=0.070 Sum_probs=39.1
Q ss_pred hcCCCCCceEEEEcCCcee-eeecCcccc--ccccccc----cCCEEEEEEec--C-----CCeeEEEEcCcCCceeeee
Q psy18207 10 EAGKDDKAWSMYIDKQRSW-FMHASIHDQ--RTEGGIS----QGSTVGVLLDL--D-----RHLLRFFVNDEPQPNFYNI 75 (293)
Q Consensus 10 ~lg~~~~~W~~~~~~~~~~-~~h~~~~~~--~~~~~~~----~~~~vGV~ld~--~-----~g~lsfy~~~~~~~~~~~~ 75 (293)
-+-..-+-|.+.||+.+.= ..-...+.+ +..+.+. ..+.|-+.|.+ . .+.+.++|||++.|.+...
T Consensus 10 ~~~~~~kDW~v~CDNt~tC~Aagy~~~~~~~~~sl~ltR~AG~~~~v~~~l~~~~~~~~~~~~~~~l~ldg~~lg~~~~~ 89 (340)
T PF06674_consen 10 GLSFSFKDWQVACDNTGTCRAAGYQDEGGGWPVSLLLTRDAGADAPVSARLTLAEPDEDDPPGKIELLLDGKPLGPLPAE 89 (340)
T ss_pred cccceeCCeEEeCCCCCcEeEeeccCCCCCceEEEEEEEccCCCCCEEEEEEeCCccccCCCCceEEEECCeECCCcccc
Confidence 4556678899999987643 332222211 1222222 23455555555 2 5899999999999976443
No 30
>PF11393 IcmL: Macrophage killing protein with similarity to conjugation protein; InterPro: IPR021055 IcmL contains two amphipathic beta-sheet regions, required for the pore-forming ability which may be related to the transfer of this protein into a host cell membrane []. The icmL gene shows significant similarity to plasmid genes involved in conjugation however IcmL is thought to be required for macrophage killing. It is unknown whether conjugation plays a role in macrophage killing [].
Probab=26.08 E-value=67 Score=25.45 Aligned_cols=19 Identities=16% Similarity=0.424 Sum_probs=15.4
Q ss_pred eEEeeeccCcCeEEEEEEE
Q psy18207 161 VALSVVGFSKGAHYWEFVI 179 (293)
Q Consensus 161 ~VLg~~~fssGrHYWEVeV 179 (293)
.++-.++...|+++|+|++
T Consensus 86 ~vi~~~g~~~G~~~W~vq~ 104 (108)
T PF11393_consen 86 PVIVEEGVNNGVYAWKVQV 104 (108)
T ss_pred cEEEEEeccCCeEEEEEEe
Confidence 4566677779999999987
No 31
>PRK10708 hypothetical protein; Provisional
Probab=22.23 E-value=2.3e+02 Score=20.25 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=18.8
Q ss_pred EEEEEE---ecCCCeeE-EEEcCcCCc-eeeeec
Q psy18207 48 TVGVLL---DLDRHLLR-FFVNDEPQP-NFYNIS 76 (293)
Q Consensus 48 ~vGV~l---d~~~g~ls-fy~~~~~~~-~~~~~~ 76 (293)
|.|+-| .+++|++= .-+.|-|+| +|-|-.
T Consensus 17 R~G~iLavE~F~EG~MyLvaL~dYP~GiWFFNE~ 50 (62)
T PRK10708 17 RPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEA 50 (62)
T ss_pred ccceEEEEeeccCcEEEEEEcCcCCCceEEEecc
Confidence 455544 45888872 224888999 887743
No 32
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family. This family form a doscoid pentameric structure. Human serum amyloid P demonstrates calcium-mediated ligand-binding.
Probab=21.49 E-value=3.2e+02 Score=23.81 Aligned_cols=22 Identities=9% Similarity=0.296 Sum_probs=18.6
Q ss_pred EEEEEEecCCCeeEEEEcCcCC
Q psy18207 48 TVGVLLDLDRHLLRFFVNDEPQ 69 (293)
Q Consensus 48 ~vGV~ld~~~g~lsfy~~~~~~ 69 (293)
.|-|--|-..|.+.+|+||+..
T Consensus 94 hvc~tw~~~~g~~~lyvnG~~~ 115 (206)
T smart00159 94 HICTTWESSSGIAELWVDGKPG 115 (206)
T ss_pred EEEEEEECCCCcEEEEECCEEc
Confidence 6777888889999999999874
No 33
>PRK00802 3-methyladenine DNA glycosylase; Reviewed
Probab=21.17 E-value=67 Score=28.39 Aligned_cols=56 Identities=14% Similarity=0.177 Sum_probs=35.3
Q ss_pred hhhhcCCCCCceEEEEc-CCceeeeecCccccccccccccCCEEEEEEecCCCeeEEEEcCcC
Q psy18207 7 LKHEAGKDDKAWSMYID-KQRSWFMHASIHDQRTEGGISQGSTVGVLLDLDRHLLRFFVNDEP 68 (293)
Q Consensus 7 ~~~~lg~~~~~W~~~~~-~~~~~~~h~~~~~~~~~~~~~~~~~vGV~ld~~~g~lsfy~~~~~ 68 (293)
|.+.||=|..-+..-+. ++..|..+.. .+..+..+.||||- ...+--+.|||.|.|
T Consensus 129 L~~AlgI~~~~~g~~l~~~~~l~i~~~~-----~~~~i~~t~RIGI~-~~~~~pwRf~i~~~~ 185 (188)
T PRK00802 129 LCKALGITLADNGADLFDASPLYIEDGK-----EPPEIVAGPRIGIS-KARDLPWRFWIPGSP 185 (188)
T ss_pred HHHHhCCCHHHCCCcccCCCCEEEecCC-----CCCcEEEeCccccC-ccccCCeEEEECCCc
Confidence 56777776665655554 4455554322 12356788899998 333356999999876
Done!