Query psy18207
Match_columns 293
No_of_seqs 240 out of 1279
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 16:29:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18207.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18207hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uv9_A TRIM5alpha, tripartite 100.0 4.2E-38 1.4E-42 274.5 16.0 153 119-281 3-185 (186)
2 3kb5_A Tripartite motif-contai 100.0 5.9E-37 2E-41 268.6 19.5 153 120-278 3-193 (193)
3 2vok_A 52 kDa RO protein; poly 100.0 3.9E-37 1.3E-41 268.8 17.6 146 130-280 9-186 (188)
4 2wl1_A Pyrin, marenostrin; amy 100.0 1.2E-36 4.3E-41 266.2 19.3 145 130-279 13-189 (191)
5 2fbe_A Predicted: similar to R 100.0 1.2E-36 4.1E-41 268.2 17.4 147 130-281 10-187 (201)
6 4b3n_A Maltose-binding peripla 100.0 1.7E-33 6E-38 283.0 18.5 143 130-278 410-602 (602)
7 2afj_A Gene rich cluster, C9 g 100.0 5.5E-32 1.9E-36 242.1 11.9 157 131-289 40-223 (226)
8 3emw_A SPRY domain-containing 100.0 3.7E-31 1.3E-35 235.6 13.7 148 130-279 42-214 (217)
9 2jk9_A SPRY domain-containing 100.0 2.7E-30 9.3E-35 228.7 12.6 146 131-278 32-204 (212)
10 3toj_A SET1/ASH2 histone methy 99.9 2.8E-24 9.6E-29 190.6 13.1 149 131-281 12-176 (213)
11 2yyo_A SPRY domain-containing 99.7 5.1E-17 1.8E-21 139.3 12.6 140 140-281 8-163 (171)
12 3emw_A SPRY domain-containing 99.1 6E-11 2.1E-15 105.1 5.8 67 8-76 119-193 (217)
13 2vok_A 52 kDa RO protein; poly 98.8 4E-09 1.4E-13 91.5 6.5 54 10-67 92-146 (188)
14 2jk9_A SPRY domain-containing 98.8 5.8E-09 2E-13 91.6 5.9 65 9-75 110-183 (212)
15 2afj_A Gene rich cluster, C9 g 98.8 3.3E-09 1.1E-13 94.2 3.6 65 8-74 116-188 (226)
16 3uv9_A TRIM5alpha, tripartite 98.7 1.5E-08 5E-13 87.7 6.5 55 9-63 84-145 (186)
17 2wl1_A Pyrin, marenostrin; amy 98.7 1.7E-08 5.7E-13 87.7 5.6 53 10-66 96-150 (191)
18 2fbe_A Predicted: similar to R 98.6 5.1E-08 1.7E-12 85.3 6.9 54 10-67 93-148 (201)
19 3toj_A SET1/ASH2 histone methy 98.5 7.3E-08 2.5E-12 84.9 5.7 67 6-76 78-154 (213)
20 3kb5_A Tripartite motif-contai 98.5 1.3E-07 4.4E-12 82.2 6.2 52 11-64 97-151 (193)
21 2yyo_A SPRY domain-containing 98.1 2.8E-06 9.4E-11 72.3 4.6 67 7-76 67-140 (171)
22 4b3n_A Maltose-binding peripla 98.0 5.9E-06 2E-10 82.7 6.4 54 10-63 505-565 (602)
23 2e63_A KIAA1787 protein; struc 97.6 0.0035 1.2E-07 53.2 16.4 141 132-277 7-169 (170)
24 2yue_A Protein neuralized; str 96.2 0.09 3.1E-06 44.3 13.0 138 132-279 9-161 (168)
25 2e63_A KIAA1787 protein; struc 91.8 0.15 5E-06 43.1 4.2 54 14-72 89-146 (170)
26 2yue_A Protein neuralized; str 79.4 1.6 5.6E-05 36.4 3.9 34 44-78 107-141 (168)
27 1hy9_A Cocaine and amphetamine 35.5 11 0.00036 24.0 0.6 19 42-60 14-32 (41)
28 3pvn_A C-reactive protein; pen 33.3 79 0.0027 26.4 6.1 24 47-70 94-117 (206)
29 3kqr_A Serum amyloid P-compone 28.3 94 0.0032 26.0 5.7 25 47-71 92-116 (204)
No 1
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}
Probab=100.00 E-value=4.2e-38 Score=274.46 Aligned_cols=153 Identities=15% Similarity=0.142 Sum_probs=118.8
Q ss_pred hHHHHHhhcceeeeEeCCCCCCCCeEEeCCCcEEEEcccCceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEecccc
Q psy18207 119 RLDVARDEMLVAWFTMDPGRSAPDLFFSPEHTTVTCDGYEHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVA 198 (293)
Q Consensus 119 ~~~~~l~~~~~~~~tlDp~ta~~~L~lS~d~~tv~~~~~~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~ 198 (293)
.+.++.+.. ..+||||+|||+ |+||+|+|+|++.. ..+|||+++|++|||||||||+ +++.|.||||++++.
T Consensus 3 el~~~~~y~--v~vTLDp~TA~~-l~lSed~r~Vr~~~--~~~VLG~~~ftsGrHYWEVeV~---~~~~W~vGV~~~~~~ 74 (186)
T 3uv9_A 3 ELTDARRYW--VDVTLATNNISH-AVIAEDKRQVSSRA--GTGVLGSQSITSGKHYWEVDVS---KKSAWILGVCAGFQS 74 (186)
T ss_dssp HHHHHGGGC--CCCCCCCCSSCC-CEECTTSSCEECCC--SSCEECSSCBCSSEEEEEEECT---TCSCEEEEEESCSTT
T ss_pred hHhhhheeE--EEeEeCCCCcCC-ceECCCCCEEeecC--CCcCcCCCCCCCCCEEEEEEEc---CCCcEEEEEEEEEec
Confidence 345554443 578999999996 99999999998763 4689999999999999999997 567899999999887
Q ss_pred cc-------ccccCCCcEEEEEEcCC-c----Cccc----------cC---CCCCeEEEEEeCCCCCEEEEEeeCCCCC-
Q psy18207 199 RD-------EMLVKHRDLFAVLATCS-R----YSRL----------VR---GIPDLFAVFATCSRYSRLVRGIPDLFAG- 252 (293)
Q Consensus 199 r~-------~~lg~~~~sW~l~~~~~-~----~~~~----------~~---~~~~~IGV~LD~e~~G~LSFY~n~~~~g- 252 (293)
|+ ..+++++++|++++... . ++.. .. ..|.+||||||||+ |+|||| |..+.+
T Consensus 75 r~~~~~~~~~~~~~~~g~W~l~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~p~rVGVfLDye~-G~lSFY-nv~d~~~ 152 (186)
T 3uv9_A 75 DAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEA-CTVSFF-NITNHGF 152 (186)
T ss_dssp TTTTTHHHHTCCCGGGTEEEEEEETTTEEEEEECCCTTSTTSCEEEECCCSSCCSEEEEEEETTT-TEEEEE-ETTTTTE
T ss_pred ccccccCCCcccCCCCCEEEEEECCCCEEEEEeCCCccccCCCccCcccccccCCEEEEEeecCC-CEEEEE-eCCCCce
Confidence 74 35788999999986432 2 1110 00 12345999999999 999999 655433
Q ss_pred -ceEEc--CCCCcEEEEEEcCCC-CeEEEEcCC
Q psy18207 253 -PIAFH--NLYGVFYPAVSLNRG-VTVTLHTGL 281 (293)
Q Consensus 253 -~~tF~--~f~g~lyP~Fsl~~g-~~ltL~~g~ 281 (293)
+++|+ .|++||||+|+++.+ .+|+||+..
T Consensus 153 lI~tF~~~~Fs~pL~P~F~~~~~~~plticpp~ 185 (186)
T 3uv9_A 153 LIYKFSQCSFSKPVFPYLNPRKCTVPMTLCSPS 185 (186)
T ss_dssp EEEEECSCCCSSCBEEEEECTTCCSCCEECCC-
T ss_pred EEEEeCCcCCCCCEEeEEECCCCCceEEEeCCC
Confidence 45995 599999999999764 789999753
No 2
>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=268.63 Aligned_cols=153 Identities=19% Similarity=0.230 Sum_probs=118.3
Q ss_pred HHHHHhhcceeeeEeCCCCCCCCeEEeCCCcEEEEcccC-------------ceeEEeeeccCcCeEEEEEEEeeeCCCC
Q psy18207 120 LDVARDEMLVAWFTMDPGRSAPDLFFSPEHTTVTCDGYE-------------HRVALSVVGFSKGAHYWEFVIDRYDSDT 186 (293)
Q Consensus 120 ~~~~l~~~~~~~~tlDp~ta~~~L~lS~d~~tv~~~~~~-------------~~~VLg~~~fssGrHYWEVeV~~~~~~~ 186 (293)
|.+++..+. ..+||||+|||++|+||+|+++|++.... +.+|||.++|++|||||||||+ +++
T Consensus 3 ~~~~~~~~~-~~vtLDp~TA~~~L~lSed~~~v~~~~~~~q~~p~~p~RF~~~~~VLg~~~fssGrhYWEVev~---~~~ 78 (193)
T 3kb5_A 3 MFRALMPAL-EELTFDPSSAHPSLVVSSSGRRVECSEQKAPPAGEDPRQFDKAVAVVAHQQLSEGEHYWEVDVG---DKP 78 (193)
T ss_dssp HHHHHSCSB-CCCCBCTTTSCTTEEEETTTTEEEECCSCCCCCCSCTTSCSSSCEEEBSCCBCSSEEEEEEECT---TCS
T ss_pred hHhhhcccc-ccEEECCCCCCCCEEECCCCCEEEECCcCCCCCCCCccccccccEEccCCcccCCCEEEEEEeC---cCc
Confidence 456666664 57899999999999999999999985421 3589999999999999999997 566
Q ss_pred CeEEEEEecccccccc--ccCCCcEEEEEEcCCc-----Ccc-cc--CC----CCCeEEEEEeCCCCCEEEEEeeCCC--
Q psy18207 187 DPSFGIARLDVARDEM--LVKHRDLFAVLATCSR-----YSR-LV--RG----IPDLFAVFATCSRYSRLVRGIPDLF-- 250 (293)
Q Consensus 187 ~w~vGVa~~s~~r~~~--lg~~~~sW~l~~~~~~-----~~~-~~--~~----~~~~IGV~LD~e~~G~LSFY~n~~~-- 250 (293)
.|.||||++++.|+.. +++++++|++.+.... ++. .. .. .+.+||||||||+ |+|||| |..+
T Consensus 79 ~W~lGV~~~s~~Rkg~~~~~~~~~~W~l~~~~~~~y~~~~~~~~~~~l~~~~~~~~rVGVfLDye~-G~lSFY-~v~~~~ 156 (193)
T 3kb5_A 79 RWALGVIAAEAPRRGRLHAVPSQGLWLLGLREGKILEAHVEAKEPRALRSPERRPTRIGLYLSFGD-GVLSFY-DASDAD 156 (193)
T ss_dssp SEEEEEEETTSCCSSSCCCSGGGTEEEEEEETTTEEEECCSSSSCEECCCCSSCCSEEEEEEETTT-TEEEEE-ECCSTT
T ss_pred eEEEEEeeCCcCcCCCcCCCCCCCEEEEEEeCCCEEEEEeCCCccEEEeecCCCCCEEEEEEEcCC-CEEEEE-eCCCCC
Confidence 8999999999999865 4567899999874332 221 11 11 2334999999999 999999 5554
Q ss_pred -CC-ceEEc-CCCCcEEEEEEcCC------CCeEEEE
Q psy18207 251 -AG-PIAFH-NLYGVFYPAVSLNR------GVTVTLH 278 (293)
Q Consensus 251 -~g-~~tF~-~f~g~lyP~Fsl~~------g~~ltL~ 278 (293)
.. +++|+ .|++||||+|+++. ..+++|+
T Consensus 157 ~~s~I~tF~~~Ft~pl~P~F~~~~~~~g~~~~pl~i~ 193 (193)
T 3kb5_A 157 ALVPLFAFHERLPRPVYPFFDVCWHDKGKNAQPLLLV 193 (193)
T ss_dssp CCEEEEEECSCCCSCEEEEEECCCCTTTTTCCCEEEC
T ss_pred CceEEEEeCCCCCCCeECEEEcccCCCCCccCCeEEC
Confidence 33 45997 59999999999842 2566653
No 3
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*
Probab=100.00 E-value=3.9e-37 Score=268.76 Aligned_cols=146 Identities=16% Similarity=0.185 Sum_probs=117.2
Q ss_pred eeeEeCCCCCCCCeEEeCCCcEEEEccc------------CceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEeccc
Q psy18207 130 AWFTMDPGRSAPDLFFSPEHTTVTCDGY------------EHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDV 197 (293)
Q Consensus 130 ~~~tlDp~ta~~~L~lS~d~~tv~~~~~------------~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~ 197 (293)
..+||||+||||+|+||+|+++|++... .+++|||+++|++|||||||||+ +++.|.||||++++
T Consensus 9 ~~vtLDp~TA~~~L~lSed~~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsSGrHYWEVev~---~~~~w~vGV~~~si 85 (188)
T 2vok_A 9 VHITLDRNTANSWLIISKDRRQVRMGDTHQNVSDNKERFSNYPMVLGAQRFSSGKMYWEVDVT---QKEAWDLGVCRDSV 85 (188)
T ss_dssp CCCCBCGGGSCTTEEECTTSCEEEECSSCCCCCCCTTSCCSSSEEEBSCCBSSSEEEEEEECT---TCSCEEEEEEETTC
T ss_pred cceEECCccCCCCeEECCCCCEEEECCccCCCCCCccceeeeccccccCcccCCCeEEEEEec---CCceEEEEEeeCCc
Confidence 5789999999999999999999998641 13589999999999999999997 56689999999999
Q ss_pred cccc--cccCCCcEEEEEEcCCc----Cccc-c---CCCCCeEEEEEeCCCCCEEEEEeeCCCC-C-ceEEc--CCCCcE
Q psy18207 198 ARDE--MLVKHRDLFAVLATCSR----YSRL-V---RGIPDLFAVFATCSRYSRLVRGIPDLFA-G-PIAFH--NLYGVF 263 (293)
Q Consensus 198 ~r~~--~lg~~~~sW~l~~~~~~----~~~~-~---~~~~~~IGV~LD~e~~G~LSFY~n~~~~-g-~~tF~--~f~g~l 263 (293)
+|+. .+++++++|++++.... ++.. . ...+.+||||||||+ |+|||| |..+. . +++|+ .|++||
T Consensus 86 ~Rkg~~~~~~~~~~W~l~~~~~~y~~~~~~~~~l~~~~~~~rVGVfLDye~-G~lSFY-~v~~~~~~I~tF~~~~Fs~pL 163 (188)
T 2vok_A 86 QRKGQFSLSPENGFWTIWLWQDSYEAGTSPQTTLHIQVPPCQIGIFVDYEA-GVVSFY-NITDHGSLIYTFSECVFAGPL 163 (188)
T ss_dssp CCSSCCCCSTTTTEEEEEEETTEEEECSSSCEEECCSSCCSEEEEEEETTT-TEEEEE-ETTTTTEEEEEECSCCCCSCE
T ss_pred CCCCccccCCCCCEEEEEEECCEEEEEeCCccCEecCCCCCEEEEEEEcCC-CEEEEE-ECCCCCeeeEEecCCCCCCCE
Confidence 9985 46889999999875432 2211 1 112345999999999 999999 55555 3 45997 499999
Q ss_pred EEEEEcCC------CCeEEEEcC
Q psy18207 264 YPAVSLNR------GVTVTLHTG 280 (293)
Q Consensus 264 yP~Fsl~~------g~~ltL~~g 280 (293)
||+|+++. +.+++||+.
T Consensus 164 ~P~F~~~~~~~~~~~~~l~i~~~ 186 (188)
T 2vok_A 164 RPFFNVGFNYSGGNAAPLKLCPL 186 (188)
T ss_dssp EEEEECCCCTTSCCCCCEEECCC
T ss_pred EeEEEecccCCCCCCCCEEEeCC
Confidence 99999963 357998863
No 4
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=266.16 Aligned_cols=145 Identities=17% Similarity=0.232 Sum_probs=116.3
Q ss_pred eeeEeCCCCCCCCeEEeCCCcEEEEccc------------CceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEeccc
Q psy18207 130 AWFTMDPGRSAPDLFFSPEHTTVTCDGY------------EHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDV 197 (293)
Q Consensus 130 ~~~tlDp~ta~~~L~lS~d~~tv~~~~~------------~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~ 197 (293)
..+||||+|||++|+||+|+++|++... .+.+|||+++|++|||||||||+ +++.|.||||++++
T Consensus 13 ~~~tLDp~TA~~~L~lSed~~~v~~~~~~q~~p~~p~RF~~~~~VLg~~~fssGrHYWEVev~---~~~~w~vGV~~~s~ 89 (191)
T 2wl1_A 13 VNVILDAETAYPNLIFSDDLKSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEVEVG---DKTAWILGACKTSI 89 (191)
T ss_dssp CCCEECTTTSCTTEEECTTSCEEEECCTTCCCCCCTTSCSSSCCEEEECCBCSSEEEEEEECT---TCSCEEEEEEETTC
T ss_pred eeeEECCccCCCceEECCCCcEEEECCcCCCCCCCcccccccccccCcccccCCCEEEEEEeC---CCCEEEEEEeeCCc
Confidence 4789999999999999999999998642 13579999999999999999997 56689999999999
Q ss_pred ccccc--ccCCCcEEEEEEc-CCc----Cccc-cC---CCCCeEEEEEeCCCCCEEEEEeeCCCCC-ceEEc--CCCCcE
Q psy18207 198 ARDEM--LVKHRDLFAVLAT-CSR----YSRL-VR---GIPDLFAVFATCSRYSRLVRGIPDLFAG-PIAFH--NLYGVF 263 (293)
Q Consensus 198 ~r~~~--lg~~~~sW~l~~~-~~~----~~~~-~~---~~~~~IGV~LD~e~~G~LSFY~n~~~~g-~~tF~--~f~g~l 263 (293)
.|+.. +++++++|++.+. +.. ++.. .. ..+.+||||||||+ |+|||| |.++.. +++|+ .|++||
T Consensus 90 ~Rkg~~~~~~~~~~W~l~~~~~~~y~~~~~~~~~l~~~~~~~rVGVfLDye~-G~lSFY-~v~~~~~i~tF~~~~Fs~pl 167 (191)
T 2wl1_A 90 SRKGNMTLSPENGYWVVIMMKENEYQASSVPPTRLLIKEPPKRVGIFVDYRV-GSISFY-NVTARSHIYTFASCSFSGPL 167 (191)
T ss_dssp CSSSCCCCCGGGTEEEEEEEETTEEEECCSSCEECCCSSCCSEEEEEEETTT-TEEEEE-ETTTTEEEEEECCCCCCSCE
T ss_pred CCCCccccCCCCCEEEEEEeCCCEEEEEcCCCccCccccCCcEEEEEEEcCC-CEEEEE-ECCCCcceEEeCCCCCCCCE
Confidence 99864 6788999999874 432 2211 11 12344999999999 999999 555444 45997 499999
Q ss_pred EEEEEcCC------CCeEEEEc
Q psy18207 264 YPAVSLNR------GVTVTLHT 279 (293)
Q Consensus 264 yP~Fsl~~------g~~ltL~~ 279 (293)
||+|+++. ..+++||+
T Consensus 168 ~P~F~~~~~~~~~~~~~l~i~~ 189 (191)
T 2wl1_A 168 QPIFSPGTRDGGKNTAPLTICP 189 (191)
T ss_dssp EEEEECCCCGGGTSCSCEEEEC
T ss_pred EeEEEccccCCCCCcCCEEecC
Confidence 99999964 24799986
No 5
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22
Probab=100.00 E-value=1.2e-36 Score=268.23 Aligned_cols=147 Identities=13% Similarity=0.129 Sum_probs=117.4
Q ss_pred eeeEeCCCCCCCCeEEeCCCcEEEEccc------------CceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEeccc
Q psy18207 130 AWFTMDPGRSAPDLFFSPEHTTVTCDGY------------EHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDV 197 (293)
Q Consensus 130 ~~~tlDp~ta~~~L~lS~d~~tv~~~~~------------~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~ 197 (293)
.++||||+|||++|+||+|+++|++... .+.+|||+++|++|||||||||+ +++.|.||||++++
T Consensus 10 ~~~tLDp~TA~~~L~lSed~~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsSGrHYWEVev~---~~~~w~vGV~~~si 86 (201)
T 2fbe_A 10 VDMTFDVDTANNYLIISEDLRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVG---TSQVWDVGVCKESV 86 (201)
T ss_dssp CCCCEETTTCCTTEEECTTSSEEEECSSCCCCCCCTTSCSSSCEEEESCCBSSSEEEEEEECT---TCSEEEEEEEETTS
T ss_pred EeEEECcccCCCceEECCCCcEEEECCccCCCCCCccceeeccceecCccccCCceEEEEEeC---CCCEEEEEEeeCcc
Confidence 5789999999999999999999998641 13589999999999999999997 56689999999999
Q ss_pred ccccc--ccCCCcEEEEEEcC-Cc----Ccc-cc--C-CCCCeEEEEEeCCCCCEEEEEeeCCCCC-ceEEc--CCCCcE
Q psy18207 198 ARDEM--LVKHRDLFAVLATC-SR----YSR-LV--R-GIPDLFAVFATCSRYSRLVRGIPDLFAG-PIAFH--NLYGVF 263 (293)
Q Consensus 198 ~r~~~--lg~~~~sW~l~~~~-~~----~~~-~~--~-~~~~~IGV~LD~e~~G~LSFY~n~~~~g-~~tF~--~f~g~l 263 (293)
.|+.. +++++++|++.+.. .. ++. .. . ..+.+||||||||+ |+|||| |..+.. +++|+ .|++||
T Consensus 87 ~Rkg~~~~~~~~g~W~l~~~~~~~y~~~~~~~~~l~~~~~~~rVGVfLDye~-G~lSFY-~v~~~~~i~tF~~~~Fs~pL 164 (201)
T 2fbe_A 87 NRQGKIELSSEHGFLTVGCREGKVFAASTVPMTPLWVSPQLHRVGIFLDVGM-RSIAFY-NVSDGCHIYTFIEIPVCEPW 164 (201)
T ss_dssp CCSSCCCCCTTTTEEEEEEETTTEEEECSSSCEEECCCTTCCEEEEEEETTT-TEEEEE-ETTTTEEEEEECSCCCSSCE
T ss_pred CCCCcccccCCCCEEEEEEeCCCEEEEEcCCcccCccCCCCCEEEEEEEcCC-CEEEEE-eCCCCceeEEEcCCCCCCCE
Confidence 99865 57889999998753 32 211 11 1 12344999999999 999999 555444 45997 499999
Q ss_pred EEEEEcC-----CCCeEEEEcCC
Q psy18207 264 YPAVSLN-----RGVTVTLHTGL 281 (293)
Q Consensus 264 yP~Fsl~-----~g~~ltL~~g~ 281 (293)
||+|+++ .+.+++||+..
T Consensus 165 ~P~F~~~~~~~~~~~~l~ic~~~ 187 (201)
T 2fbe_A 165 RPFFAHKRGSQDDQSILSICSVI 187 (201)
T ss_dssp EEEEEEECSSSSCCCCEEECCCC
T ss_pred EeEEEecccCCCCCCCEEEeCCC
Confidence 9999985 34589999744
No 6
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A
Probab=100.00 E-value=1.7e-33 Score=283.04 Aligned_cols=143 Identities=14% Similarity=0.140 Sum_probs=111.0
Q ss_pred eeeEeCCCCCCCCeEEeCCCcEEEEccc--------------------CceeEEeeeccCcCeEEEEEEEeeeCCCCCeE
Q psy18207 130 AWFTMDPGRSAPDLFFSPEHTTVTCDGY--------------------EHRVALSVVGFSKGAHYWEFVIDRYDSDTDPS 189 (293)
Q Consensus 130 ~~~tlDp~ta~~~L~lS~d~~tv~~~~~--------------------~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~ 189 (293)
..+||||+|||+ |+||+|+|+|++... .+.+|||+++|+||||||||||+ +++.|.
T Consensus 410 v~vtldp~ta~~-l~~s~d~r~v~~~~~~~~~~~p~~~~~~~~~~rF~~~~~VLg~~~f~sGrhyWEV~v~---~~~~w~ 485 (602)
T 4b3n_A 410 VDVTLATNNISH-AVIAEDKRQVSSRNPQIMYQAPGTLFTFPSLTNFNYCTGVLGSQSITSGKHYWEVDVS---KKSAWI 485 (602)
T ss_dssp CCCCEECCSCCS-CEECTTSSEEECCCC--------------------CCCCEEESSCBSSSEEEEEEECT---TCSCEE
T ss_pred EEEEeCCCCCCc-eeEecCCCEEEECCccccccCCCccCCCCCcccCCCCCEeccCCCCCCEEEEEEEEEC---CCeeEE
Confidence 578999999995 999999999997531 12479999999999999999997 567899
Q ss_pred EEEEecccccc-------ccccCCCcEEEEEEc-CCc----Ccc----------ccC---CCCCeEEEEEeCCCCCEEEE
Q psy18207 190 FGIARLDVARD-------EMLVKHRDLFAVLAT-CSR----YSR----------LVR---GIPDLFAVFATCSRYSRLVR 244 (293)
Q Consensus 190 vGVa~~s~~r~-------~~lg~~~~sW~l~~~-~~~----~~~----------~~~---~~~~~IGV~LD~e~~G~LSF 244 (293)
||||+.++.|+ ..+++++++|++++. +.. ++. ... ..|.+||||||||+ |+|||
T Consensus 486 ~Gv~~~~~~~~~~~~~~~~~~~~~~g~w~~~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~rvgv~ld~~~-g~~sF 564 (602)
T 4b3n_A 486 LGVCAGFQSDAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEA-CTVSF 564 (602)
T ss_dssp EEEECCCCTTTSSTHHHHCCCCGGGTEEEEEEETTTEEEEEECCCSSCCSSCEEEECCCSSCCSEEEEEEETTT-TEEEE
T ss_pred EEEeeccccccccccCCCcccCCCCcEEEEEEecCCeEEEEeCCCcccccCCcccccccCCCCCEEEEEEecCC-CEEEE
Confidence 99998765542 346788999999864 322 111 001 12345999999999 99999
Q ss_pred EeeCCCCC--ceEEc--CCCCcEEEEEEcCCC-CeEEEE
Q psy18207 245 GIPDLFAG--PIAFH--NLYGVFYPAVSLNRG-VTVTLH 278 (293)
Q Consensus 245 Y~n~~~~g--~~tF~--~f~g~lyP~Fsl~~g-~~ltL~ 278 (293)
| |..+.+ +++|+ .|++||||+|+++.+ .+|+||
T Consensus 565 y-~~~~~~~~i~tf~~~~f~~~l~P~f~~~~~~~~l~iC 602 (602)
T 4b3n_A 565 F-NITNHGFLIYKFSQCSFSKPVFPYLNPRKCTVPMTLC 602 (602)
T ss_dssp E-ETTTTTEEEEEECSCCCCSCBEEEEECTTCSSCEEEC
T ss_pred E-eCCCCceeeEeCCCcCCCCCEeCeEECCCCCCceEeC
Confidence 9 655432 46996 599999999999765 689997
No 7
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22
Probab=99.97 E-value=5.5e-32 Score=242.10 Aligned_cols=157 Identities=15% Similarity=0.134 Sum_probs=119.5
Q ss_pred eeEeCCCCCCCCeEEeCCCcEEEEccc--CceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEeccccc-----cccc
Q psy18207 131 WFTMDPGRSAPDLFFSPEHTTVTCDGY--EHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVAR-----DEML 203 (293)
Q Consensus 131 ~~tlDp~ta~~~L~lS~d~~tv~~~~~--~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~r-----~~~l 203 (293)
+++|||+|||++|+||+|+++|++... .+.+|||+++|++|||||||+|.....++.|.||||++++++ ...+
T Consensus 40 ~~tLDp~ta~~~L~lSed~~~v~~~~~~~~~~~Vlg~~~f~sGrhYWEV~V~~~~~~~~w~vGV~~~s~~~~r~~~~~~~ 119 (226)
T 2afj_A 40 HHGWNPKDCSENIDVKEGGLCFERRPVAQSTDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALL 119 (226)
T ss_dssp HHSSCCSSSCCSSEEETTTTEEECSSCTTTSSSEEECCCCCCSEEEEEEECCCCSSSCCCEEEEEESSCCCSSCSSSCCC
T ss_pred ccEEccccCCCCEEEeCCCEEEEECCCCCCcCeEEECCCccCCEEEEEEEEeccCCCCCEEEEecCCccccccccccccc
Confidence 569999999999999999999986431 234899999999999999999974222567999999999963 2457
Q ss_pred cCCCcEEEEEEc-CCc-Ccccc-----C---------CCCCeEEEEEeCCCCCEEEEEeeCCCCCceEEcC-CCCcEEEE
Q psy18207 204 VKHRDLFAVLAT-CSR-YSRLV-----R---------GIPDLFAVFATCSRYSRLVRGIPDLFAGPIAFHN-LYGVFYPA 266 (293)
Q Consensus 204 g~~~~sW~l~~~-~~~-~~~~~-----~---------~~~~~IGV~LD~e~~G~LSFY~n~~~~g~~tF~~-f~g~lyP~ 266 (293)
|.+..+|++.+. +.. |+... . ..+..||||||||+ |+||||+|+...+ ++|+. ++++|||+
T Consensus 120 G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~rIGV~LD~e~-G~lSFy~ng~~l~-~aF~~~~~~~L~P~ 197 (226)
T 2afj_A 120 GSNSESWGWDIGRGKLYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEE-GTLGYSIGGTYLG-PAFRGLKGRTLYPS 197 (226)
T ss_dssp CCSCEEEEEEGGGTSTTSSSSCCSCSSSSCCSGGGGSCCSSCEEEEEETTT-TEEEEESTTCSCS-TTHHHHHHHCCEEE
T ss_pred cCCCCcEEEEcCCCeEEECccccCcccccccccCCcCCCCCEEEEEEECCC-CEEEEEECCeEeE-EEEEcCCCCEEEEE
Confidence 889999999752 221 22110 1 11223999999999 9999997766554 68875 56699999
Q ss_pred EEcCC---CCeEEEEcCCCCChhhhc
Q psy18207 267 VSLNR---GVTVTLHTGLEVPPEYVL 289 (293)
Q Consensus 267 Fsl~~---g~~ltL~~g~~~P~~~~~ 289 (293)
|++.. ..++++++|+++++--+.
T Consensus 198 f~l~~g~~~v~l~~~~g~~~~~l~~~ 223 (226)
T 2afj_A 198 VSAVWGQCQVRIRYMGERRVEETRRI 223 (226)
T ss_dssp EEECCTTSCCEEEEESCCCCSSSCCC
T ss_pred EEcccCCCEEEEEEcCCCChhhhhhh
Confidence 99854 467888899988765443
No 8
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A
Probab=99.97 E-value=3.7e-31 Score=235.64 Aligned_cols=148 Identities=17% Similarity=0.169 Sum_probs=115.7
Q ss_pred eeeEeCCCCCCCCeEEeCCCcEEEEcc--cCceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEeccccc-----ccc
Q psy18207 130 AWFTMDPGRSAPDLFFSPEHTTVTCDG--YEHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVAR-----DEM 202 (293)
Q Consensus 130 ~~~tlDp~ta~~~L~lS~d~~tv~~~~--~~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~r-----~~~ 202 (293)
..+||||+|||++|.||+|+++|++.. ..+.+|||+++|++|||||||+|......+.|.||||+++++| ...
T Consensus 42 ~~~tlDp~ta~~~L~lSed~~~v~~~~~~~~~~~Vl~~~~~~sGrhYWEV~v~~~~~g~~~~vGv~~~~~~r~~~g~~~~ 121 (217)
T 3emw_A 42 RRHGWNPKDCSENIEVKEGGLYFERRPVAQSTDGARGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQTDHYAAL 121 (217)
T ss_dssp HHTSEEEEEECTTEEEEGGGTEEEECCBSSCEEEEEESCCBSSSEEEEEEECCGGGCTTCCEEEEECTTSCCEESSSCCC
T ss_pred cceEeCcccCCCCEEECCCCeEEEECccCCCCCEEEeCCCccCccEEEEEEEcccCCCCceeEEEEcCccccccCCcccc
Confidence 357999999999999999999999864 2356899999999999999999974322257999999999984 346
Q ss_pred ccCCCcEEEEEEcCCc--Cccc-----cCC---------CCCeEEEEEeCCCCCEEEEEeeCCCCCceEEcC-CCCcEEE
Q psy18207 203 LVKHRDLFAVLATCSR--YSRL-----VRG---------IPDLFAVFATCSRYSRLVRGIPDLFAGPIAFHN-LYGVFYP 265 (293)
Q Consensus 203 lg~~~~sW~l~~~~~~--~~~~-----~~~---------~~~~IGV~LD~e~~G~LSFY~n~~~~g~~tF~~-f~g~lyP 265 (293)
+|.++.+|++.+.... ++.. ..+ .+..|||||||++ |+||||.|+...+ +||++ ++++|||
T Consensus 122 lG~~~~SW~l~~~~g~~~h~~~~~~~~~~~~~~~~~~~~~~d~IGV~LD~~~-G~LsFy~ng~~lg-~aF~~~~~~~LyP 199 (217)
T 3emw_A 122 LGSNSESWGWDIGRGKLYHQSKGPGAPQYPAGTQGEQLEVPERLLVVLDMEE-GTLGYAIGGTYLG-PAFRGLKGRTLYP 199 (217)
T ss_dssp TTSSTTEEEEETTTCBEESSCCSSCCCBSSSSSTTCCCCCCSEEEEEEETTT-TEEEEEETTEEEE-EEECCCTTCCBEE
T ss_pred ccCCCCEEEEEeCCCcEEeCCcccCCccccccccccCCCCCCEEEEEEEcCC-CEEEEEECCeEeE-EEEECCCCCEEEE
Confidence 8889999999742221 3221 111 1223999999999 9999998877665 69986 6779999
Q ss_pred EEEcCC-CCeEEEEc
Q psy18207 266 AVSLNR-GVTVTLHT 279 (293)
Q Consensus 266 ~Fsl~~-g~~ltL~~ 279 (293)
+|++.. +..|+|..
T Consensus 200 ~~sl~~g~~~v~l~~ 214 (217)
T 3emw_A 200 AVSAVWGQCQVRIRY 214 (217)
T ss_dssp EEEECSTTCEEEEEE
T ss_pred EEEeccCCcEEEEEe
Confidence 999854 57888763
No 9
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A
Probab=99.97 E-value=2.7e-30 Score=228.69 Aligned_cols=146 Identities=16% Similarity=0.246 Sum_probs=110.0
Q ss_pred eeEeCCCCCCCCeEEeCCCc-EEEEccc--CceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEecccccc-----cc
Q psy18207 131 WFTMDPGRSAPDLFFSPEHT-TVTCDGY--EHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVARD-----EM 202 (293)
Q Consensus 131 ~~tlDp~ta~~~L~lS~d~~-tv~~~~~--~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~r~-----~~ 202 (293)
.++|||+|||++|.||+|++ ++..... .+.+|||+++|++|||||||+|.....++.|.||||+++++|+ ..
T Consensus 32 ~~tldp~ta~~~L~lsed~~~~~~~~~~~~~~~~Vlg~~~f~sGrhYWEV~v~~~~~~~~w~vGV~~~~~~r~~~g~~~~ 111 (212)
T 2jk9_A 32 LHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYTTL 111 (212)
T ss_dssp HTSEEEEEECTTEEEETTEEEEEEECCBTTEEEEEEESCCBCSSEEEEEEECCGGGCTTCCEEEEECTTSCCEEESSCCC
T ss_pred ccccChhhcCCceEEeCCCeEEEEECCCCCccceEEcCCCccCCeEEEEEEEecccCCCcEEEEEEcCCccccccCcccc
Confidence 56999999999999999986 6654322 3568999999999999999999742235689999999999873 34
Q ss_pred ccCCCcEEEEEEcCCc--Cccc-----cC----------CCCCeEEEEEeCCCCCEEEEEeeCCCCCceEEcC-CCCcEE
Q psy18207 203 LVKHRDLFAVLATCSR--YSRL-----VR----------GIPDLFAVFATCSRYSRLVRGIPDLFAGPIAFHN-LYGVFY 264 (293)
Q Consensus 203 lg~~~~sW~l~~~~~~--~~~~-----~~----------~~~~~IGV~LD~e~~G~LSFY~n~~~~g~~tF~~-f~g~ly 264 (293)
+|.++++|++.....+ |+.. .. ..+..||||||||+ |+||||+|+...+ ++|+. +.++||
T Consensus 112 ~G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~IGv~LD~e~-G~lsFy~ng~~l~-~aF~~~~~~~l~ 189 (212)
T 2jk9_A 112 VGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDD-GTLSFIVDGQYMG-VAFRGLKGKKLY 189 (212)
T ss_dssp TTSSTTEEEEETTTTEEEESTTTSCCEESSTTSCTTCCCCCCSEEEEEEETTT-TEEEEEETTEEEE-EEECCCTTCCBE
T ss_pred cccCCCcEeeECCCCcEEECCcccCccccCcccccCCcCCCCCEEEEEEECCC-CEEEEEECCEEeE-EEeccCCCCEEe
Confidence 6889999999652211 2111 01 11234999999999 9999997765444 69986 566999
Q ss_pred EEEEcCC-CCeEEEE
Q psy18207 265 PAVSLNR-GVTVTLH 278 (293)
Q Consensus 265 P~Fsl~~-g~~ltL~ 278 (293)
|+|++.. ++.++|+
T Consensus 190 P~f~l~~g~~~v~l~ 204 (212)
T 2jk9_A 190 PVVSAVWGHCEIRMR 204 (212)
T ss_dssp EEEEECCTTCEEEEE
T ss_pred eEEEEEcCCcEEEEE
Confidence 9999954 4567665
No 10
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}
Probab=99.91 E-value=2.8e-24 Score=190.61 Aligned_cols=149 Identities=19% Similarity=0.274 Sum_probs=122.7
Q ss_pred eeEeCCCCCCCCeEEeCCCcEEEEcccCceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEeccccccccccCCCcEE
Q psy18207 131 WFTMDPGRSAPDLFFSPEHTTVTCDGYEHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVARDEMLVKHRDLF 210 (293)
Q Consensus 131 ~~tlDp~ta~~~L~lS~d~~tv~~~~~~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~r~~~lg~~~~sW 210 (293)
.++|||++++++|.||+|+++|+.. ..+++|+++.++++|+|||||+|.....++.|.||||++..+++..+|.+..||
T Consensus 12 ~v~ld~~d~~~~l~ls~d~l~v~~~-~~~~~vra~~~v~~G~~YfEV~v~~~~~~~~~~iG~a~~~~~~~~~~G~d~~S~ 90 (213)
T 3toj_A 12 RVLLALHDRAPQLKISDDRLTVVGE-KGYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGWSQPLGNLQAPLGYDKFSY 90 (213)
T ss_dssp CCCEEEEEECTTSEECTTSSEEECC-SSCEEEEESCCBSSEEEEEEEEEEECCTTCEEEEEEECTTSCTTSCTTSSTTEE
T ss_pred eEEechhhCCCCEEEcCCCcEEEeC-CceeEEEeCCCccCCeEEEEEEEeecCCCceEEEEeccCCcccccCCCCCCCcE
Confidence 4699999999999999999999973 467899999999999999999998643356899999999999988899999999
Q ss_pred EEEE-cCCc-Cccc--cCC--CCCe--EEEEEeCCCC-------CEEEEEeeCCCCCceEEcCC-CCcEEEEEEcCCCCe
Q psy18207 211 AVLA-TCSR-YSRL--VRG--IPDL--FAVFATCSRY-------SRLVRGIPDLFAGPIAFHNL-YGVFYPAVSLNRGVT 274 (293)
Q Consensus 211 ~l~~-~~~~-~~~~--~~~--~~~~--IGV~LD~e~~-------G~LSFY~n~~~~g~~tF~~f-~g~lyP~Fsl~~g~~ 274 (293)
++.. ++.. |+.. ..+ ...+ |||+||++.- |+|+||+|+...+ ++|+++ .+++||++++..++.
T Consensus 91 gy~~~~G~~~h~~~~~~yg~~~~~GDvIGc~ld~~~~~~~~~~~g~i~Ft~NG~~lg-~aF~~~~~~~lyPavsl~~~~~ 169 (213)
T 3toj_A 91 SWRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINLPEDTISGRGSSEIIFYKNGVNQG-VAYKDIFEGVYFPAISLYKSCT 169 (213)
T ss_dssp EEETTTTCEEETTEEECCSCCCCTTCEEEEEEEECCC-----CCCEEEEEETTEEEE-EEEESCCSSCBEEEEEEESSCE
T ss_pred EEECCCCeEEeCCcCcccCCCCCCCCEEEEEEEcCCCccccCCccEEEEEeCCeeee-eeEEcCCCCcEEEEEEcCCCCE
Confidence 9963 3332 3221 111 1223 9999999971 4899999987766 699874 789999999988999
Q ss_pred EEEEcCC
Q psy18207 275 VTLHTGL 281 (293)
Q Consensus 275 ltL~~g~ 281 (293)
++++.|.
T Consensus 170 v~~NFG~ 176 (213)
T 3toj_A 170 VSINFGP 176 (213)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 9999996
No 11
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}
Probab=99.71 E-value=5.1e-17 Score=139.25 Aligned_cols=140 Identities=14% Similarity=0.079 Sum_probs=108.6
Q ss_pred CCCeEEeCCCcEEEEcccCceeEEeeeccCcCeEEEEEEEeeeCCCCCeEEEEEeccccccccccCCCcEEEEEEc-CCc
Q psy18207 140 APDLFFSPEHTTVTCDGYEHRVALSVVGFSKGAHYWEFVIDRYDSDTDPSFGIARLDVARDEMLVKHRDLFAVLAT-CSR 218 (293)
Q Consensus 140 ~~~L~lS~d~~tv~~~~~~~~~VLg~~~fssGrHYWEVeV~~~~~~~~w~vGVa~~s~~r~~~lg~~~~sW~l~~~-~~~ 218 (293)
.+.|.+++|..+++.....+.+|+++.++.+|+|||||++......+.+.||+|.+..+.+..+|.+..||++..+ +..
T Consensus 8 ~~~l~~~~d~l~~~~~~~~~~~vra~~p~~~g~~YfEv~i~~~~~~~~~~IG~a~~~~~~~~~~G~d~~S~gy~~~dG~~ 87 (171)
T 2yyo_A 8 FKHILVDGDTLSYHGNSGEVGCYVASRPLTKDSNYFEVSIVDSGVRGTIAVGLVPQYYSLDHQPGWLPDSVAYHADDGKL 87 (171)
T ss_dssp EESEEEETTEEEECCCSSCCEEEECSSCCCSSSCEEEEEEEEETTTCCCEEEEECTTCCTTSCTTSSTTCEEEETTTCCE
T ss_pred cceEEEcCCEEEEeCCCCceeEEEECCCCCCCCEEEEEEEEECCCCcEEEEEecCCCCCCccCCCccCCEEEEEcCCCeE
Confidence 4567887774444333235678999999999999999999876445789999999998887788999999999653 333
Q ss_pred -Ccc---ccCCC--CCe--EEEEEeCC-----CCCEEEEEeeCCCCCceEEcCCC-CcEEEEEEcCC-CCeEEEEcCC
Q psy18207 219 -YSR---LVRGI--PDL--FAVFATCS-----RYSRLVRGIPDLFAGPIAFHNLY-GVFYPAVSLNR-GVTVTLHTGL 281 (293)
Q Consensus 219 -~~~---~~~~~--~~~--IGV~LD~e-----~~G~LSFY~n~~~~g~~tF~~f~-g~lyP~Fsl~~-g~~ltL~~g~ 281 (293)
++. ...+. ..+ |||.||++ . ++|.|++|+...+ .+|.++. ++|||++++.. ++.++++.|.
T Consensus 88 ~~~~~~~~~yg~~f~~GDvIGc~id~~~~~~~~-~~i~Ft~NG~~lg-~af~~~~~~~lyPaV~l~~~g~~v~vNFG~ 163 (171)
T 2yyo_A 88 YNGRAKGRQFGSKCNSGDRIGCGIEPVSFDVQT-AQIFFTKNGKRVG-STIMPMSPDGLFPAVGMHSLGEEVRLHLNA 163 (171)
T ss_dssp ESSSSCCBCCSCCCCTTCEEEEEECGGGGSSSC-EEEEEEETTEEEE-EEEESSCSSSCEEEEEECSTTEEEEEETTC
T ss_pred EeCCCCCCcCCCCCCCCCEEEEEEEeccCCCCc-EEEEEEECCEEcC-ceecCCcCCCEEEEEEEecCCCEEEEECCC
Confidence 221 11111 223 99999997 6 8999999998876 6898774 89999999987 8999999997
No 12
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A
Probab=99.10 E-value=6e-11 Score=105.08 Aligned_cols=67 Identities=15% Similarity=0.261 Sum_probs=52.4
Q ss_pred hhhcCCCCCceEEEEcCCceeeeecCcccccccc-------ccccCCEEEEEEecCCCeeEEEEcCcCCc-eeeeec
Q psy18207 8 KHEAGKDDKAWSMYIDKQRSWFMHASIHDQRTEG-------GISQGSTVGVLLDLDRHLLRFFVNDEPQP-NFYNIS 76 (293)
Q Consensus 8 ~~~lg~~~~~W~~~~~~~~~~~~h~~~~~~~~~~-------~~~~~~~vGV~ld~~~g~lsfy~~~~~~~-~~~~~~ 76 (293)
..++|.|+.||+++++++. ++||+........ ....++||||+||+++|+||||.||+++| +|.++.
T Consensus 119 ~~~lG~~~~SW~l~~~~g~--~~h~~~~~~~~~~~~~~~~~~~~~~d~IGV~LD~~~G~LsFy~ng~~lg~aF~~~~ 193 (217)
T 3emw_A 119 AALLGSNSESWGWDIGRGK--LYHQSKGPGAPQYPAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRGLK 193 (217)
T ss_dssp CCCTTSSTTEEEEETTTCB--EESSCCSSCCCBSSSSSTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCCT
T ss_pred cccccCCCCEEEEEeCCCc--EEeCCcccCCccccccccccCCCCCCEEEEEEEcCCCEEEEEECCeEeEEEEECCC
Confidence 4579999999999976665 4598764211112 24778999999999999999999999999 897654
No 13
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*
Probab=98.83 E-value=4e-09 Score=91.47 Aligned_cols=54 Identities=7% Similarity=0.193 Sum_probs=43.6
Q ss_pred hcCCCCCceEEEEcCCceeeeecCcccccccc-ccccCCEEEEEEecCCCeeEEEEcCc
Q psy18207 10 EAGKDDKAWSMYIDKQRSWFMHASIHDQRTEG-GISQGSTVGVLLDLDRHLLRFFVNDE 67 (293)
Q Consensus 10 ~lg~~~~~W~~~~~~~~~~~~h~~~~~~~~~~-~~~~~~~vGV~ld~~~g~lsfy~~~~ 67 (293)
.+|.++++|+|++.+++++++|+... .+ ....+.||||+||||+|+||||=...
T Consensus 92 ~~~~~~~~W~l~~~~~~y~~~~~~~~----~l~~~~~~~rVGVfLDye~G~lSFY~v~~ 146 (188)
T 2vok_A 92 SLSPENGFWTIWLWQDSYEAGTSPQT----TLHIQVPPCQIGIFVDYEAGVVSFYNITD 146 (188)
T ss_dssp CCSTTTTEEEEEEETTEEEECSSSCE----EECCSSCCSEEEEEEETTTTEEEEEETTT
T ss_pred ccCCCCCEEEEEEECCEEEEEeCCcc----CEecCCCCCEEEEEEEcCCCEEEEEECCC
Confidence 68999999999998766889998432 23 33467899999999999999995444
No 14
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A
Probab=98.78 E-value=5.8e-09 Score=91.58 Aligned_cols=65 Identities=20% Similarity=0.377 Sum_probs=49.8
Q ss_pred hhcCCCCCceEEEEcCCceeeeecCcccc-cc-c-----c-ccccCCEEEEEEecCCCeeEEEEcCcCCc-eeeee
Q psy18207 9 HEAGKDDKAWSMYIDKQRSWFMHASIHDQ-RT-E-----G-GISQGSTVGVLLDLDRHLLRFFVNDEPQP-NFYNI 75 (293)
Q Consensus 9 ~~lg~~~~~W~~~~~~~~~~~~h~~~~~~-~~-~-----~-~~~~~~~vGV~ld~~~g~lsfy~~~~~~~-~~~~~ 75 (293)
..+|.|+.+|++...+++ ++||+.+.. .+ + + ....++||||+||+++|+||||.||+..| +|.++
T Consensus 110 ~~~G~~~~sw~~~~~~~~--~~h~~~~~~~~~~~~~~~~~~~~~~~~~IGv~LD~e~G~lsFy~ng~~l~~aF~~~ 183 (212)
T 2jk9_A 110 TLVGNNHESWGWDLGRNR--LYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGL 183 (212)
T ss_dssp CCTTSSTTEEEEETTTTE--EEESTTTSCCEESSTTSCTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCC
T ss_pred cccccCCCcEeeECCCCc--EEECCcccCccccCcccccCCcCCCCCEEEEEEECCCCEEEEEECCEEeEEEeccC
Confidence 468999999999876554 578876531 01 1 1 23578999999999999999999999887 88653
No 15
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22
Probab=98.75 E-value=3.3e-09 Score=94.23 Aligned_cols=65 Identities=17% Similarity=0.272 Sum_probs=50.0
Q ss_pred hhhcCCCCCceEEEEcCCceeeeecCcccc-ccc-----c-ccccCCEEEEEEecCCCeeEEEEcCcCCc-eeee
Q psy18207 8 KHEAGKDDKAWSMYIDKQRSWFMHASIHDQ-RTE-----G-GISQGSTVGVLLDLDRHLLRFFVNDEPQP-NFYN 74 (293)
Q Consensus 8 ~~~lg~~~~~W~~~~~~~~~~~~h~~~~~~-~~~-----~-~~~~~~~vGV~ld~~~g~lsfy~~~~~~~-~~~~ 74 (293)
..++|.|+.+|++.+.+++ ++||+.+.. .+. + ....++||||+|||++|+||||.||+.+| +|..
T Consensus 116 ~~~~G~~~~sw~~~~~~~~--~~h~~~~~~~~~~~~~~~~~~~~~~~rIGV~LD~e~G~lSFy~ng~~l~~aF~~ 188 (226)
T 2afj_A 116 AALLGSNSESWGWDIGRGK--LYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGTYLGPAFRG 188 (226)
T ss_dssp SCCCCCSCEEEEEEGGGTS--TTSSSSCCSCSSSSCCSGGGGSCCSSCEEEEEETTTTEEEEESTTCSCSTTHHH
T ss_pred cccccCCCCcEEEEcCCCe--EEECccccCcccccccccCCcCCCCCEEEEEEECCCCEEEEEECCeEeEEEEEc
Confidence 4568999999999976555 788876421 011 1 24678999999999999999999999987 7754
No 16
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}
Probab=98.72 E-value=1.5e-08 Score=87.70 Aligned_cols=55 Identities=15% Similarity=0.220 Sum_probs=41.5
Q ss_pred hhcCCCCCceEEEEcCCcee-eeecCcccc-----cccc-ccccCCEEEEEEecCCCeeEEE
Q psy18207 9 HEAGKDDKAWSMYIDKQRSW-FMHASIHDQ-----RTEG-GISQGSTVGVLLDLDRHLLRFF 63 (293)
Q Consensus 9 ~~lg~~~~~W~~~~~~~~~~-~~h~~~~~~-----~~~~-~~~~~~~vGV~ld~~~g~lsfy 63 (293)
..+|+++++|+|++.++..| ++||..... .+++ ....+.||||+||||+|+||||
T Consensus 84 ~~~~~~~g~W~l~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~p~rVGVfLDye~G~lSFY 145 (186)
T 3uv9_A 84 ENYQPKYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEACTVSFF 145 (186)
T ss_dssp TCCCGGGTEEEEEEETTTEEEEEECCCTTSTTSCEEEECCCSSCCSEEEEEEETTTTEEEEE
T ss_pred cccCCCCCEEEEEECCCCEEEEEeCCCccccCCCccCcccccccCCEEEEEeecCCCEEEEE
Confidence 46899999999987766554 778765431 1223 2345789999999999999999
No 17
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=98.68 E-value=1.7e-08 Score=87.70 Aligned_cols=53 Identities=9% Similarity=0.121 Sum_probs=42.5
Q ss_pred hcCCCCCceEEEEc-CCceeeeecCcccccccc-ccccCCEEEEEEecCCCeeEEEEcC
Q psy18207 10 EAGKDDKAWSMYID-KQRSWFMHASIHDQRTEG-GISQGSTVGVLLDLDRHLLRFFVND 66 (293)
Q Consensus 10 ~lg~~~~~W~~~~~-~~~~~~~h~~~~~~~~~~-~~~~~~~vGV~ld~~~g~lsfy~~~ 66 (293)
.+|.++++|+|++. +++++++|+... .+ ....+.||||+||||+|+||||=..
T Consensus 96 ~~~~~~~~W~l~~~~~~~y~~~~~~~~----~l~~~~~~~rVGVfLDye~G~lSFY~v~ 150 (191)
T 2wl1_A 96 TLSPENGYWVVIMMKENEYQASSVPPT----RLLIKEPPKRVGIFVDYRVGSISFYNVT 150 (191)
T ss_dssp CCCGGGTEEEEEEEETTEEEECCSSCE----ECCCSSCCSEEEEEEETTTTEEEEEETT
T ss_pred ccCCCCCEEEEEEeCCCEEEEEcCCCc----cCccccCCcEEEEEEEcCCCEEEEEECC
Confidence 58899999999976 677889997533 23 3456889999999999999999543
No 18
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22
Probab=98.61 E-value=5.1e-08 Score=85.34 Aligned_cols=54 Identities=15% Similarity=0.086 Sum_probs=40.8
Q ss_pred hcCCCCCceEEEEcCCc-eeeeecCcccccccc-ccccCCEEEEEEecCCCeeEEEEcCc
Q psy18207 10 EAGKDDKAWSMYIDKQR-SWFMHASIHDQRTEG-GISQGSTVGVLLDLDRHLLRFFVNDE 67 (293)
Q Consensus 10 ~lg~~~~~W~~~~~~~~-~~~~h~~~~~~~~~~-~~~~~~~vGV~ld~~~g~lsfy~~~~ 67 (293)
.++.++.+|+|++.+++ ++++| +.. +.+ ....+.||||+||||+|+||||=...
T Consensus 93 ~~~~~~g~W~l~~~~~~~y~~~~-~~~---~~l~~~~~~~rVGVfLDye~G~lSFY~v~~ 148 (201)
T 2fbe_A 93 ELSSEHGFLTVGCREGKVFAAST-VPM---TPLWVSPQLHRVGIFLDVGMRSIAFYNVSD 148 (201)
T ss_dssp CCCTTTTEEEEEEETTTEEEECS-SSC---EEECCCTTCCEEEEEEETTTTEEEEEETTT
T ss_pred cccCCCCEEEEEEeCCCEEEEEc-CCc---ccCccCCCCCEEEEEEEcCCCEEEEEeCCC
Confidence 37889999999987654 55665 333 444 34567899999999999999995443
No 19
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}
Probab=98.54 E-value=7.3e-08 Score=84.87 Aligned_cols=67 Identities=25% Similarity=0.360 Sum_probs=52.7
Q ss_pred chhhhcCCCCCceEEEEcCCceeeeecCcccccccc-ccccCCEEEEEEecCC--------CeeEEEEcCcCCc-eeeee
Q psy18207 6 HLKHEAGKDDKAWSMYIDKQRSWFMHASIHDQRTEG-GISQGSTVGVLLDLDR--------HLLRFFVNDEPQP-NFYNI 75 (293)
Q Consensus 6 ~~~~~lg~~~~~W~~~~~~~~~~~~h~~~~~~~~~~-~~~~~~~vGV~ld~~~--------g~lsfy~~~~~~~-~~~~~ 75 (293)
.+.+++|.|..||++.-++++ .+||+... .-+ ....|++||++||+++ |+|+||.||+.+| +|.++
T Consensus 78 ~~~~~~G~d~~S~gy~~~~G~--~~h~~~~~--~yg~~~~~GDvIGc~ld~~~~~~~~~~~g~i~Ft~NG~~lg~aF~~~ 153 (213)
T 3toj_A 78 NLQAPLGYDKFSYSWRSKKGT--KFHQSIGK--HYSSGYGQGDVLGFYINLPEDTISGRGSSEIIFYKNGVNQGVAYKDI 153 (213)
T ss_dssp CTTSCTTSSTTEEEEETTTTC--EEETTEEE--CCSCCCCTTCEEEEEEEECCC-----CCCEEEEEETTEEEEEEEESC
T ss_pred ccccCCCCCCCcEEEECCCCe--EEeCCcCc--ccCCCCCCCCEEEEEEEcCCCccccCCccEEEEEeCCeeeeeeEEcC
Confidence 455789999999998754554 35886431 223 6789999999999988 7999999999999 89764
Q ss_pred c
Q psy18207 76 S 76 (293)
Q Consensus 76 ~ 76 (293)
.
T Consensus 154 ~ 154 (213)
T 3toj_A 154 F 154 (213)
T ss_dssp C
T ss_pred C
Confidence 3
No 20
>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens}
Probab=98.50 E-value=1.3e-07 Score=82.16 Aligned_cols=52 Identities=12% Similarity=0.159 Sum_probs=39.2
Q ss_pred cCCCCCceEEEEcCCc-eeeeecCccccccccc--cccCCEEEEEEecCCCeeEEEE
Q psy18207 11 AGKDDKAWSMYIDKQR-SWFMHASIHDQRTEGG--ISQGSTVGVLLDLDRHLLRFFV 64 (293)
Q Consensus 11 lg~~~~~W~~~~~~~~-~~~~h~~~~~~~~~~~--~~~~~~vGV~ld~~~g~lsfy~ 64 (293)
++.++++|+|++.+++ ++++|+.... ..+. ...+.||||+|||++|+||||=
T Consensus 97 ~~~~~~~W~l~~~~~~~y~~~~~~~~~--~~l~~~~~~~~rVGVfLDye~G~lSFY~ 151 (193)
T 3kb5_A 97 AVPSQGLWLLGLREGKILEAHVEAKEP--RALRSPERRPTRIGLYLSFGDGVLSFYD 151 (193)
T ss_dssp CSGGGTEEEEEEETTTEEEECCSSSSC--EECCCCSSCCSEEEEEEETTTTEEEEEE
T ss_pred CCCCCCEEEEEEeCCCEEEEEeCCCcc--EEEeecCCCCCEEEEEEEcCCCEEEEEe
Confidence 5678899999998776 4566665431 1243 3567899999999999999994
No 21
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}
Probab=98.06 E-value=2.8e-06 Score=72.25 Aligned_cols=67 Identities=16% Similarity=0.190 Sum_probs=52.8
Q ss_pred hhhhcCCCCCceEEEEcCCceeeeecCcccccccc-ccccCCEEEEEEecC-----CCeeEEEEcCcCCc-eeeeec
Q psy18207 7 LKHEAGKDDKAWSMYIDKQRSWFMHASIHDQRTEG-GISQGSTVGVLLDLD-----RHLLRFFVNDEPQP-NFYNIS 76 (293)
Q Consensus 7 ~~~~lg~~~~~W~~~~~~~~~~~~h~~~~~~~~~~-~~~~~~~vGV~ld~~-----~g~lsfy~~~~~~~-~~~~~~ 76 (293)
+.+++|.|..||++.-++++. +|+... .+.-+ ....+++||+.||++ .++|.|+.||+.+| ||.++.
T Consensus 67 ~~~~~G~d~~S~gy~~~dG~~--~~~~~~-~~~yg~~f~~GDvIGc~id~~~~~~~~~~i~Ft~NG~~lg~af~~~~ 140 (171)
T 2yyo_A 67 LDHQPGWLPDSVAYHADDGKL--YNGRAK-GRQFGSKCNSGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMS 140 (171)
T ss_dssp TTSCTTSSTTCEEEETTTCCE--ESSSSC-CBCCSCCCCTTCEEEEEECGGGGSSSCEEEEEEETTEEEEEEEESSC
T ss_pred CccCCCccCCEEEEEcCCCeE--EeCCCC-CCcCCCCCCCCCEEEEEEEeccCCCCcEEEEEEECCEEcCceecCCc
Confidence 457899999999998766665 465322 12334 678999999999998 59999999999999 887654
No 22
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A
Probab=98.00 E-value=5.9e-06 Score=82.66 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=41.0
Q ss_pred hcCCCCCceEEEEcC-CceeeeecCcccc-----ccccc-cccCCEEEEEEecCCCeeEEE
Q psy18207 10 EAGKDDKAWSMYIDK-QRSWFMHASIHDQ-----RTEGG-ISQGSTVGVLLDLDRHLLRFF 63 (293)
Q Consensus 10 ~lg~~~~~W~~~~~~-~~~~~~h~~~~~~-----~~~~~-~~~~~~vGV~ld~~~g~lsfy 63 (293)
.+++++.+|+|.+.+ ..++++|+..... ++++. ..++.||||+|||++|+||||
T Consensus 505 ~~~~~~g~w~~~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~rvgv~ld~~~g~~sFy 565 (602)
T 4b3n_A 505 NYQPKYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEACTVSFF 565 (602)
T ss_dssp CCCGGGTEEEEEEETTTEEEEEECCCSSCCSSCEEEECCCSSCCSEEEEEEETTTTEEEEE
T ss_pred ccCCCCcEEEEEEecCCeEEEEeCCCcccccCCcccccccCCCCCEEEEEEecCCCEEEEE
Confidence 467889999998655 4677899876531 23342 345789999999999999999
No 23
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.61 E-value=0.0035 Score=53.17 Aligned_cols=141 Identities=18% Similarity=0.171 Sum_probs=91.5
Q ss_pred eEeCCCCCCCCeEEeCCCcEEEEc----ccCceeEEeeeccCcCeEEEEEEEeeeCC--CCCeEEEEEeccccc----cc
Q psy18207 132 FTMDPGRSAPDLFFSPEHTTVTCD----GYEHRVALSVVGFSKGAHYWEFVIDRYDS--DTDPSFGIARLDVAR----DE 201 (293)
Q Consensus 132 ~tlDp~ta~~~L~lS~d~~tv~~~----~~~~~~VLg~~~fssGrHYWEVeV~~~~~--~~~w~vGVa~~s~~r----~~ 201 (293)
+++-+ ....++.|++++++++.. ++....|..++.+..|.- ++|++++... .+...+||...+=.. ..
T Consensus 7 l~FH~-~hG~nI~L~~~~~~A~R~~~~~~f~~givFS~rPl~~~E~-~~v~I~~~~~~wsG~l~~GvT~~dP~~l~lP~~ 84 (170)
T 2e63_A 7 GELHP-RTGRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRV-FTVRIDRKVNSWSGSIEIGVTALDPSVLDFPSS 84 (170)
T ss_dssp SCCCS-CCCSSEEECSSSCEEEESCTTTCSCSCCEEEEEEECTTCE-EEEEEEEECCSSCCCCEEEEESSCTTSCCCCSS
T ss_pred ccccc-ccCCCeEECCCCeEEEeCCCCcccCceEEEECCCCCCCCE-EEEEEEeecCCcceeEEEEEEccChhhccCCCC
Confidence 35666 567899999999999987 233346888888888875 5788875422 235799999753111 11
Q ss_pred cccCCCcEEEEEE-----cCCc----CccccCCCCCe--EEEEEeCCCCCEEEEEeeCCCCCceEEcCCCCcEEEEEEcC
Q psy18207 202 MLVKHRDLFAVLA-----TCSR----YSRLVRGIPDL--FAVFATCSRYSRLVRGIPDLFAGPIAFHNLYGVFYPAVSLN 270 (293)
Q Consensus 202 ~lg~~~~sW~l~~-----~~~~----~~~~~~~~~~~--IGV~LD~e~~G~LSFY~n~~~~g~~tF~~f~g~lyP~Fsl~ 270 (293)
...-..++|.+.. ++.. ..........+ ||+++|- . |+|.|+.|+.+++ +.++++..|||+.|.+.
T Consensus 85 ~~~L~~~~Wv~~~~~v~~ng~~~~e~~~~~l~~l~~Gd~ig~~~~~-~-G~l~~~iNg~~~g-~~~~~ip~~LwavvDvy 161 (170)
T 2e63_A 85 ATGLKGGSWVVSGCSVLRDGRSVLEEYGQDLDQLGEGDRVGVERTV-A-GELRLWVNGRDCG-VAATGLPPRVWAVVDLY 161 (170)
T ss_dssp GGGCCSSEEEESSSEEEESSCEEEESCSSCGGGCCSSCCEEEEECT-T-SCEEEEESSCEEE-EEECCCCSCEEEEEECC
T ss_pred hhhCCCCeEEEeccccccCCcccchhccccccccCCCCEEEEEEcC-C-cEEEEEECCccce-eeEcCCCCcEEEEEEcc
Confidence 1122358998631 1211 00000001123 9999984 4 8999999998887 56778888999999995
Q ss_pred -CCCeEEE
Q psy18207 271 -RGVTVTL 277 (293)
Q Consensus 271 -~g~~ltL 277 (293)
...+|+|
T Consensus 162 G~t~~V~i 169 (170)
T 2e63_A 162 GKCTQITV 169 (170)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 3355655
No 24
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=96.24 E-value=0.09 Score=44.29 Aligned_cols=138 Identities=9% Similarity=0.138 Sum_probs=89.4
Q ss_pred eEeCCCCCCCCeEEeCCCcEEEEcc-cCceeEEeeeccCcCeEEEEEEEeeeC--CCCCeEEEEEecccc-ccccc----
Q psy18207 132 FTMDPGRSAPDLFFSPEHTTVTCDG-YEHRVALSVVGFSKGAHYWEFVIDRYD--SDTDPSFGIARLDVA-RDEML---- 203 (293)
Q Consensus 132 ~tlDp~ta~~~L~lS~d~~tv~~~~-~~~~~VLg~~~fssGrHYWEVeV~~~~--~~~~w~vGVa~~s~~-r~~~l---- 203 (293)
+++-+ ....++.|++++++++... +....|..+..+..|.- ++|++.+.. -.+...+||..-+=. .+..+
T Consensus 9 l~FH~-~~G~nI~L~~~~~~A~R~~sf~~givFS~RPl~~~E~-~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~lP~~a 86 (168)
T 2yue_A 9 LQFHS-VHGDNIRISRDGTLARRFESFCRAITFSARPVRINER-ICVKFAEISNNWNGGIRFGFTSNDPVTLEGTLPKYA 86 (168)
T ss_dssp CCEEE-EECTTEEECCSSCCEEECSCSSCCEEEESSCCCSSCC-EEEEEEECCSSSSSCCEEEEESSCGGGTTTCCCSSS
T ss_pred ccccc-ccCCCeEECCCCcEEEecccCCceEEEECCCCcCCCE-EEEEEEeecCCcceeEEEeeeecCHHHcCCCCCCcC
Confidence 34554 5678999999999999864 23346888888888865 478876532 123579999974311 11111
Q ss_pred ----cCCCcEEEEEEcCCcCccccCCCCCeEEEEEeCCCCCEEEEEeeCCCCCceEEcC--CCCcEEEEEEcC-CCCeEE
Q psy18207 204 ----VKHRDLFAVLATCSRYSRLVRGIPDLFAVFATCSRYSRLVRGIPDLFAGPIAFHN--LYGVFYPAVSLN-RGVTVT 276 (293)
Q Consensus 204 ----g~~~~sW~l~~~~~~~~~~~~~~~~~IGV~LD~e~~G~LSFY~n~~~~g~~tF~~--f~g~lyP~Fsl~-~g~~lt 276 (293)
-...++|+..+... . ......+++++| .. |+|.|+.|+.+.+ ..++. -+.|||..|.+. ...+|+
T Consensus 87 ~~dL~~~~~~W~~~l~~~-~----~~~g~~l~f~v~-~~-G~l~~~iNg~~~g-~~~~~V~~~~pLwavvDvyG~t~~V~ 158 (168)
T 2yue_A 87 CPDLTNRPGFWAKALHEQ-Y----CEKDNILYYYVN-GA-GDVIYGINNEEKG-VILTGIDTRSLLWTVIDIYGNCTGIE 158 (168)
T ss_dssp SSHHHHSTTBCCEECCST-T----CCSSCEEEEEEC-TT-SEEEEEESSCEEE-EEEECCCCSSCCEEEEECCSSCSEEE
T ss_pred chHHhcCCCEEEEEeccc-c----ccCCCEEEEEEc-CC-CEEEEEECCCccE-EEEcCCCCCCceEEEEEccCCeEEEE
Confidence 12347887643211 0 000112899998 55 8999999988776 45654 367999999994 457888
Q ss_pred EEc
Q psy18207 277 LHT 279 (293)
Q Consensus 277 L~~ 279 (293)
|..
T Consensus 159 il~ 161 (168)
T 2yue_A 159 FLD 161 (168)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
No 25
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.79 E-value=0.15 Score=43.06 Aligned_cols=54 Identities=17% Similarity=0.189 Sum_probs=35.7
Q ss_pred CCCceEEEEcCCceeeeecCccccc---ccc-ccccCCEEEEEEecCCCeeEEEEcCcCCcee
Q psy18207 14 DDKAWSMYIDKQRSWFMHASIHDQR---TEG-GISQGSTVGVLLDLDRHLLRFFVNDEPQPNF 72 (293)
Q Consensus 14 ~~~~W~~~~~~~~~~~~h~~~~~~~---~~~-~~~~~~~vGV~ld~~~g~lsfy~~~~~~~~~ 72 (293)
.+.+|.|+. +..++|...... .++ ....|++||+.++-+ |.|-|+|||+.||-+
T Consensus 89 ~~~~Wv~~~----~~v~~ng~~~~e~~~~~l~~l~~Gd~ig~~~~~~-G~l~~~iNg~~~g~~ 146 (170)
T 2e63_A 89 KGGSWVVSG----CSVLRDGRSVLEEYGQDLDQLGEGDRVGVERTVA-GELRLWVNGRDCGVA 146 (170)
T ss_dssp CSSEEEESS----SEEEESSCEEEESCSSCGGGCCSSCCEEEEECTT-SCEEEEESSCEEEEE
T ss_pred CCCeEEEec----cccccCCcccchhccccccccCCCCEEEEEEcCC-cEEEEEECCccceee
Confidence 347788742 334555432100 011 336899999999955 999999999999955
No 26
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=79.35 E-value=1.6 Score=36.45 Aligned_cols=34 Identities=12% Similarity=0.152 Sum_probs=27.8
Q ss_pred ccCCEEEEEEecCCCeeEEEEcCcCCcee-eeecce
Q psy18207 44 SQGSTVGVLLDLDRHLLRFFVNDEPQPNF-YNISNR 78 (293)
Q Consensus 44 ~~~~~vGV~ld~~~g~lsfy~~~~~~~~~-~~~~~~ 78 (293)
..++++|+.+| ..|.|-|+|||+.+|.| .+.+..
T Consensus 107 ~~g~~l~f~v~-~~G~l~~~iNg~~~g~~~~~V~~~ 141 (168)
T 2yue_A 107 EKDNILYYYVN-GAGDVIYGINNEEKGVILTGIDTR 141 (168)
T ss_dssp CSSCEEEEEEC-TTSEEEEEESSCEEEEEEECCCCS
T ss_pred cCCCEEEEEEc-CCCEEEEEECCCccEEEEcCCCCC
Confidence 45789999998 56999999999999966 466643
No 27
>1hy9_A Cocaine and amphetamine regulated transcript protein; cysteine knot, signaling protein; NMR {Homo sapiens} SCOP: g.3.17.1
Probab=35.50 E-value=11 Score=23.97 Aligned_cols=19 Identities=26% Similarity=0.445 Sum_probs=16.6
Q ss_pred ccccCCEEEEEEecCCCee
Q psy18207 42 GISQGSTVGVLLDLDRHLL 60 (293)
Q Consensus 42 ~~~~~~~vGV~ld~~~g~l 60 (293)
.+.+|+|||=+.|+.+|+.
T Consensus 14 AvRkG~RigklC~C~rg~~ 32 (41)
T 1hy9_A 14 AVRKGARIGKLCDCPRGTS 32 (41)
T ss_dssp EEECSSSEEECCBCCTTCC
T ss_pred hhhcccccchhcCCCCCCc
Confidence 5688999999999999874
No 28
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=33.29 E-value=79 Score=26.42 Aligned_cols=24 Identities=13% Similarity=0.356 Sum_probs=20.5
Q ss_pred CEEEEEEecCCCeeEEEEcCcCCc
Q psy18207 47 STVGVLLDLDRHLLRFFVNDEPQP 70 (293)
Q Consensus 47 ~~vGV~ld~~~g~lsfy~~~~~~~ 70 (293)
..|-|-.|-..|.+.+||||++++
T Consensus 94 ~Hv~~twd~~~G~~~lyvdG~~~~ 117 (206)
T 3pvn_A 94 VHICTSWESASGIVEFWVDGKPRV 117 (206)
T ss_dssp EEEEEEEETTTCEEEEEETTEECC
T ss_pred EEEEEEEECCCCeEEEEECCEEcc
Confidence 378888888889999999999876
No 29
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=28.25 E-value=94 Score=25.96 Aligned_cols=25 Identities=16% Similarity=0.327 Sum_probs=21.3
Q ss_pred CEEEEEEecCCCeeEEEEcCcCCce
Q psy18207 47 STVGVLLDLDRHLLRFFVNDEPQPN 71 (293)
Q Consensus 47 ~~vGV~ld~~~g~lsfy~~~~~~~~ 71 (293)
..|-|--|-..|.+.+||||++++.
T Consensus 92 ~Hv~~twd~~~G~~~lyvdG~~~~~ 116 (204)
T 3kqr_A 92 VHICVSWESSSGIAEFWINGTPLVK 116 (204)
T ss_dssp EEEEEEEETTTCEEEEEETTEECCC
T ss_pred EEEEEEEECCCCeEEEEECCEEeee
Confidence 3788888888999999999998763
Done!