BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18211
(127 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193613019|ref|XP_001952820.1| PREDICTED: uncharacterized protein C4orf14 homolog [Acyrthosiphon
pisum]
Length = 689
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+ GDVYL+GCTNVGKST+FN LQSD CK+KA DL+ RATTSPWPGTTLNLLK
Sbjct: 339 TKGDVYLIGCTNVGKSTMFNTLLQSDYCKVKAVDLVQRATTSPWPGTTLNLLK 391
>gi|157117918|ref|XP_001653100.1| hypothetical protein AaeL_AAEL008086 [Aedes aegypti]
gi|108875941|gb|EAT40166.1| AAEL008086-PA [Aedes aegypti]
Length = 697
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 48/56 (85%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
V + GDVYLVGCTNVGKS+LFNA L+SDLCK+KASDL+ RAT PWPGTTL +LK
Sbjct: 347 VWGTRGDVYLVGCTNVGKSSLFNALLRSDLCKVKASDLVQRATACPWPGTTLKMLK 402
>gi|307177178|gb|EFN66411.1| Uncharacterized protein C4orf14 [Camponotus floridanus]
Length = 697
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 46/51 (90%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY++GCTNVGKS+LFNA LQSD CK++A DLI RAT SPWPGTTLNLLK
Sbjct: 344 GDVYVIGCTNVGKSSLFNALLQSDYCKVQAVDLIQRATISPWPGTTLNLLK 394
>gi|157117920|ref|XP_001653101.1| hypothetical protein AaeL_AAEL008095 [Aedes aegypti]
gi|108875942|gb|EAT40167.1| AAEL008095-PA [Aedes aegypti]
Length = 689
Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/56 (75%), Positives = 48/56 (85%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
V + GDVYLVGCTNVGKS+LFNA L+SDLCK+KASDL+ RAT PWPGTTL +LK
Sbjct: 347 VWGTRGDVYLVGCTNVGKSSLFNALLRSDLCKVKASDLVQRATACPWPGTTLKMLK 402
>gi|332024512|gb|EGI64710.1| Uncharacterized protein C4orf14-like protein [Acromyrmex
echinatior]
Length = 532
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 46/51 (90%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY++GCTNVGKS+LFNA LQSD CK++A DLI RAT SPWPGTTLNLLK
Sbjct: 201 GDVYIIGCTNVGKSSLFNALLQSDYCKVQAVDLIQRATISPWPGTTLNLLK 251
>gi|170033577|ref|XP_001844653.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874621|gb|EDS38004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 687
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 47/56 (83%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
V S GDVYLVGCTNVGKSTLFNA L SDLCK++A+DL+ RAT PWPGTTL +LK
Sbjct: 344 VWGSRGDVYLVGCTNVGKSTLFNALLASDLCKVQATDLVQRATACPWPGTTLRMLK 399
>gi|322799594|gb|EFZ20872.1| hypothetical protein SINV_10706 [Solenopsis invicta]
Length = 778
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 46/51 (90%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY++GCTNVGKS+LFNA LQSD CK++A DL+ RAT SPWPGTTLNLLK
Sbjct: 442 GDVYVIGCTNVGKSSLFNALLQSDYCKVQAVDLVQRATISPWPGTTLNLLK 492
>gi|158299358|ref|XP_319462.4| AGAP010271-PA [Anopheles gambiae str. PEST]
gi|157014326|gb|EAA13944.4| AGAP010271-PA [Anopheles gambiae str. PEST]
Length = 596
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 49/56 (87%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
V + GDVYLVGCTNVGKSTLFNA L+SDLCK++A+DLI +AT SPWPGTT+ +LK
Sbjct: 253 VWGTRGDVYLVGCTNVGKSTLFNALLRSDLCKVQATDLIQKATASPWPGTTIRMLK 308
>gi|307196380|gb|EFN77969.1| Uncharacterized protein C4orf14-like protein [Harpegnathos
saltator]
Length = 621
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 46/51 (90%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY++GCTNVGKS+LFN LQSD CK++A+DLI RAT SPWPGTTLNLLK
Sbjct: 284 GDVYVIGCTNVGKSSLFNVLLQSDYCKVQAADLIQRATISPWPGTTLNLLK 334
>gi|170576186|ref|XP_001893531.1| RE23670p [Brugia malayi]
gi|158600406|gb|EDP37634.1| RE23670p, putative [Brugia malayi]
Length = 931
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 7/95 (7%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
D+YLVGCTN GKSTLFNA LQSDLCK++A DL+ RA T+PWPGTT++LLK + +
Sbjct: 560 NDMYLVGCTNAGKSTLFNALLQSDLCKVRAVDLVERAATTPWPGTTISLLKFPVMNPSPH 619
Query: 93 KVKELGKKILLSQVKGKNMSKTEKKPLQPQYSLIK 127
K++ +++L++Q +KK + +Y+L K
Sbjct: 620 KLEIRRRRLLMNQA-------WQKKENRARYNLYK 647
>gi|383849691|ref|XP_003700478.1| PREDICTED: nitric oxide-associated protein 1-like [Megachile
rotundata]
Length = 739
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 45/54 (83%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S GDVYLVGCTNVGKSTLFN L SD CK++A DLI R+T SPWPGTTLNLLK
Sbjct: 399 SVRGDVYLVGCTNVGKSTLFNVLLNSDYCKVQAIDLIPRSTVSPWPGTTLNLLK 452
>gi|402593995|gb|EJW87922.1| hypothetical protein WUBG_01170 [Wuchereria bancrofti]
Length = 797
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 66/94 (70%), Gaps = 7/94 (7%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCK 93
D+YLVGCTN GKSTLFNA LQSDLCK++A DL+ RA T+PWPGTT++LLK + + K
Sbjct: 427 DMYLVGCTNAGKSTLFNALLQSDLCKVRAVDLVERAATTPWPGTTISLLKFPVMNPSPHK 486
Query: 94 VKELGKKILLSQVKGKNMSKTEKKPLQPQYSLIK 127
++ +++L++Q +KK + +Y+L K
Sbjct: 487 LEIRRRRLLMNQA-------WQKKENRVRYNLYK 513
>gi|345478814|ref|XP_001599126.2| PREDICTED: uncharacterized protein C4orf14 homolog [Nasonia
vitripennis]
Length = 761
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 43/51 (84%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTN GKSTLFN LQSD CK +A DLI RATTSPWPGTTLNLLK
Sbjct: 415 SDVYIVGCTNAGKSTLFNTLLQSDFCKSQAVDLIQRATTSPWPGTTLNLLK 465
>gi|91090296|ref|XP_971651.1| PREDICTED: similar to CG10914 CG10914-PA [Tribolium castaneum]
gi|270013800|gb|EFA10248.1| hypothetical protein TcasGA2_TC012448 [Tribolium castaneum]
Length = 709
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 47/55 (85%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
GDVY+VGCTNVGKS+LFNA +QSD CK +A DLI RATTS WPGTTLNLLK IK
Sbjct: 372 GDVYIVGCTNVGKSSLFNALIQSDYCKTQAIDLIQRATTSVWPGTTLNLLKFPIK 426
>gi|312379364|gb|EFR25662.1| hypothetical protein AND_08807 [Anopheles darlingi]
Length = 691
Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 40/56 (71%), Positives = 48/56 (85%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
V + GDVYLVGCTNVGKSTLFNA L+SDLCK++A+DL+ +AT SPWPGTT+ LK
Sbjct: 362 VWGTRGDVYLVGCTNVGKSTLFNALLRSDLCKVQATDLVQKATASPWPGTTIRTLK 417
>gi|341892310|gb|EGT48245.1| hypothetical protein CAEBREN_18443 [Caenorhabditis brenneri]
Length = 496
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 47/55 (85%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L GD++LVGCTN GKST+FNA LQSDLCK++A DLI RATTS WPGTT++LLK
Sbjct: 121 LGMRGDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLIDRATTSIWPGTTISLLK 175
>gi|393906591|gb|EJD74330.1| hypothetical protein LOAG_18344 [Loa loa]
Length = 791
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 7/94 (7%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCK 93
D+YLVGCTN GKSTLFNA LQSDLCK++A DL+ RA T+PWPGTT++LLK + + K
Sbjct: 415 DMYLVGCTNAGKSTLFNALLQSDLCKVRAVDLVERAATTPWPGTTISLLKFPVMNPSPHK 474
Query: 94 VKELGKKILLSQVKGKNMSKTEKKPLQPQYSLIK 127
++ +++L +Q +KK + +Y+L K
Sbjct: 475 LEIRRRRLLANQA-------WQKKEDRMRYNLYK 501
>gi|312084638|ref|XP_003144356.1| hypothetical protein LOAG_08778 [Loa loa]
Length = 637
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 45/50 (90%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+YLVGCTN GKSTLFNA LQSDLCK++A DL+ RA T+PWPGTT++LLK
Sbjct: 415 DMYLVGCTNAGKSTLFNALLQSDLCKVRAVDLVERAATTPWPGTTISLLK 464
>gi|341899488|gb|EGT55423.1| hypothetical protein CAEBREN_16192 [Caenorhabditis brenneri]
Length = 927
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 47/55 (85%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L GD++LVGCTN GKST+FNA LQSDLCK++A DLI RATTS WPGTT++LLK
Sbjct: 552 LGMRGDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLIDRATTSIWPGTTISLLK 606
>gi|268532912|ref|XP_002631584.1| Hypothetical protein CBG20762 [Caenorhabditis briggsae]
Length = 871
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 47/55 (85%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L GD++LVGCTN GKST+FNA LQSDLCK++A DL+ RATTS WPGTT++LLK
Sbjct: 502 LGMRGDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLVDRATTSIWPGTTISLLK 556
>gi|17537249|ref|NP_496845.1| Protein Y48E1B.2, isoform a [Caenorhabditis elegans]
gi|15718314|emb|CAB07689.2| Protein Y48E1B.2, isoform a [Caenorhabditis elegans]
Length = 890
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 47/55 (85%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L GD++LVGCTN GKST+FNA LQSDLCK++A DL+ RATTS WPGTT++LLK
Sbjct: 501 LGMRGDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLVDRATTSIWPGTTISLLK 555
>gi|321475687|gb|EFX86649.1| hypothetical protein DAPPUDRAFT_313052 [Daphnia pulex]
Length = 710
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+ GDVYL+GCTNVGKS+LFNA + SD CK +ASDL+ RAT S WPGTTLNLLK
Sbjct: 372 ARGDVYLLGCTNVGKSSLFNALISSDFCKTQASDLLERATVSAWPGTTLNLLK 424
>gi|324501284|gb|ADY40574.1| Unknown [Ascaris suum]
Length = 380
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+YLVGCTN GKSTLFN LQSDLCK++A DL+ RATTS WPGTT++LLK
Sbjct: 218 NDIYLVGCTNAGKSTLFNTLLQSDLCKVRAVDLVQRATTSIWPGTTISLLK 268
>gi|449270675|gb|EMC81332.1| hypothetical protein A306_10846, partial [Columba livia]
Length = 390
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
AGDVYL+G TN GKSTLFNA L+SD CK +A+D ++RAT SPWPGTTLNLLK I T
Sbjct: 29 AGDVYLLGATNSGKSTLFNALLRSDYCKSRATDAVNRATVSPWPGTTLNLLKFPIINPTC 88
Query: 92 CKVKELGKKILLSQVKGKN-MSKTEKKPLQ 120
++ +++ K ++ +S EKK L+
Sbjct: 89 DRIFRRQERLKEEATKTEDELSSGEKKYLK 118
>gi|17537247|ref|NP_496846.1| Protein Y48E1B.2, isoform b [Caenorhabditis elegans]
gi|15718315|emb|CAB54438.2| Protein Y48E1B.2, isoform b [Caenorhabditis elegans]
Length = 388
Score = 88.6 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GD++LVGCTN GKST+FNA LQSDLCK++A DL+ RATTS WPGTT++LLK
Sbjct: 3 GDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLVDRATTSIWPGTTISLLK 53
>gi|380014450|ref|XP_003691245.1| PREDICTED: nitric oxide-associated protein 1-like [Apis florea]
Length = 419
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 43/51 (84%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVGCTNVGKS+LFN L SD CK++A DL+ RAT S WPGTTLNLLK
Sbjct: 319 GDVYLVGCTNVGKSSLFNTLLNSDYCKVQAVDLVQRATVSAWPGTTLNLLK 369
>gi|340722480|ref|XP_003399633.1| PREDICTED: uncharacterized protein C4orf14 homolog [Bombus
terrestris]
Length = 753
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 43/51 (84%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVGCTNVGKS+LFN L SD CK++A DL+ RAT S WPGTTLNLLK
Sbjct: 414 GDVYLVGCTNVGKSSLFNTLLNSDYCKVQAIDLVQRATVSAWPGTTLNLLK 464
>gi|350418813|ref|XP_003491975.1| PREDICTED: uncharacterized protein C4orf14 homolog [Bombus
impatiens]
Length = 751
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 43/51 (84%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVGCTNVGKS+LFN L SD CK++A DL+ RAT S WPGTTLNLLK
Sbjct: 412 GDVYLVGCTNVGKSSLFNTLLNSDYCKVQAIDLVQRATVSAWPGTTLNLLK 462
>gi|224049407|ref|XP_002192151.1| PREDICTED: nitric oxide-associated protein 1 [Taeniopygia guttata]
Length = 457
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 57/86 (66%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
AGDVYL+G TN GKSTLFN L+SD CK +A D+I RAT SPWPGTTLNLLK I T
Sbjct: 99 AGDVYLLGATNSGKSTLFNTLLRSDYCKSRAPDIIDRATVSPWPGTTLNLLKFPIINPTC 158
Query: 92 CKVKELGKKILLSQVKGKNMSKTEKK 117
++ +++ K ++ +E+K
Sbjct: 159 DRIFRRQERLKEEAAKTEDQLSSEEK 184
>gi|242021419|ref|XP_002431142.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516391|gb|EEB18404.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 528
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 66/100 (66%), Gaps = 9/100 (9%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
V + GD+YLVGCTNVGKSTLFN L+SDLC+I+A + + RAT S WPGTTLNLLK IK
Sbjct: 175 VWGTKGDMYLVGCTNVGKSTLFNILLKSDLCRIEADNKLHRATISSWPGTTLNLLKFPIK 234
Query: 88 IQTVCKVKELGK--KILLSQVKGKNMSKTEKKPLQPQYSL 125
+ GK ++ +++ KN+ K++K + SL
Sbjct: 235 -------RLYGKLNRVRFNRLMNKNILKSKKNKENTEKSL 267
>gi|324501468|gb|ADY40655.1| Unknown [Ascaris suum]
Length = 802
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+YLVGCTN GKSTLFN LQSDLCK++A DL+ RATTS WPGTT++LLK
Sbjct: 420 DIYLVGCTNAGKSTLFNTLLQSDLCKVRAVDLVQRATTSIWPGTTISLLK 469
>gi|324501529|gb|ADY40678.1| Unknown [Ascaris suum]
Length = 809
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+YLVGCTN GKSTLFN LQSDLCK++A DL+ RATTS WPGTT++LLK
Sbjct: 427 DIYLVGCTNAGKSTLFNTLLQSDLCKVRAVDLVQRATTSIWPGTTISLLK 476
>gi|357620128|gb|EHJ72434.1| hypothetical protein KGM_09361 [Danaus plexippus]
Length = 701
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 52/70 (74%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDV+LVG TNVGKS+LFNA LQSD CK+ A D++ RAT S WPGTTLNLLK I +
Sbjct: 368 GDVFLVGSTNVGKSSLFNALLQSDYCKVHAVDIVKRATVSRWPGTTLNLLKFPINRPSGW 427
Query: 93 KVKELGKKIL 102
K+++ ++L
Sbjct: 428 KIRQRSHRLL 437
>gi|195150909|ref|XP_002016392.1| GL11551 [Drosophila persimilis]
gi|194110239|gb|EDW32282.1| GL11551 [Drosophila persimilis]
Length = 623
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
S GDVYL+GCTNVGKSTLFN L SD C+ +AS+L+ +ATT PWPGTTL LL+ I
Sbjct: 274 SYKGDVYLLGCTNVGKSTLFNILLNSDYCRPEASELVRKATTCPWPGTTLELLRFPIFRP 333
Query: 90 TVCKVKELGKKILLSQVKGKNMSKTEKKPLQ 120
+ +V + K++ +V+ ++ K ++ Q
Sbjct: 334 SDSRVYQRFKRLFSERVERASLDKLRREQAQ 364
>gi|125808464|ref|XP_001360762.1| GA10638 [Drosophila pseudoobscura pseudoobscura]
gi|54635934|gb|EAL25337.1| GA10638 [Drosophila pseudoobscura pseudoobscura]
Length = 623
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
S GDVYL+GCTNVGKSTLFN L SD C+ +AS+L+ +ATT PWPGTTL LL+ I
Sbjct: 274 SYKGDVYLLGCTNVGKSTLFNILLNSDYCRPEASELVRKATTCPWPGTTLELLRFPIFRP 333
Query: 90 TVCKVKELGKKILLSQVKGKNMSKTEKKPLQ 120
+ +V + K++ +V+ ++ K ++ Q
Sbjct: 334 SDSRVYQRFKRLFSERVERASLDKLRREQAQ 364
>gi|327279942|ref|XP_003224714.1| PREDICTED: uncharacterized protein C4orf14 homolog [Anolis
carolinensis]
Length = 630
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 41/51 (80%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFNA L SD CK +AS I RAT SPWPGTTLNLLK
Sbjct: 271 GDVYLVGATNTGKSTLFNALLHSDYCKSRASQAIHRATISPWPGTTLNLLK 321
>gi|126331705|ref|XP_001369899.1| PREDICTED: uncharacterized protein C4orf14 homolog [Monodelphis
domestica]
Length = 685
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN LQSD C K +D I RAT SPWPGTTLNLLK I T
Sbjct: 330 GDVYLVGSTNAGKSTLFNTLLQSDYCIAKGADAIDRATISPWPGTTLNLLKFPISSPTPY 389
Query: 93 KVKELGKKILLSQVKGK-NMSKTEKKPLQ 120
++ E +++ K + ++S+ E+K L+
Sbjct: 390 RLFERNRRLQQEAAKSEDDLSEQEQKHLK 418
>gi|28573544|ref|NP_611297.3| CG10914 [Drosophila melanogaster]
gi|17945519|gb|AAL48812.1| RE23670p [Drosophila melanogaster]
gi|28380737|gb|AAF57738.2| CG10914 [Drosophila melanogaster]
Length = 624
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 57/84 (67%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVGCTNVGKS+LFN L SD C+ +ASDL+ +ATT PWPGTTL LL+ I +
Sbjct: 277 GDVYLVGCTNVGKSSLFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLRFPILRPSND 336
Query: 93 KVKELGKKILLSQVKGKNMSKTEK 116
+V + K+++ + + M K +
Sbjct: 337 RVYQRFKRLVSERSEKAEMEKERR 360
>gi|195429551|ref|XP_002062821.1| GK19491 [Drosophila willistoni]
gi|194158906|gb|EDW73807.1| GK19491 [Drosophila willistoni]
Length = 644
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 44/51 (86%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYL+GCTNVGKSTLFN L SD C+ +ASDL+++ATT PWPGTTL LL+
Sbjct: 295 GDVYLLGCTNVGKSTLFNILLNSDYCRPEASDLVAKATTCPWPGTTLKLLR 345
>gi|390354295|ref|XP_782008.3| PREDICTED: nitric oxide-associated protein 1-like
[Strongylocentrotus purpuratus]
Length = 924
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 43/51 (84%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYL+G NVGKSTLFN FL+SDLCK KAS L+ RAT S WPGTTLNLL+
Sbjct: 577 GDVYLLGTANVGKSTLFNRFLESDLCKAKASSLMGRATISQWPGTTLNLLR 627
>gi|195335495|ref|XP_002034399.1| GM21850 [Drosophila sechellia]
gi|194126369|gb|EDW48412.1| GM21850 [Drosophila sechellia]
Length = 624
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVGCTNVGKS+LFN L SD C+ +ASDL+ +ATT PWPGTTL LL+
Sbjct: 277 GDVYLVGCTNVGKSSLFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLR 327
>gi|195487584|ref|XP_002091970.1| GE11927 [Drosophila yakuba]
gi|194178071|gb|EDW91682.1| GE11927 [Drosophila yakuba]
Length = 623
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 57/84 (67%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYL+GCTNVGKS+LFN L SD C+ +ASDL+ +ATT PWPGTTL LL+ I +
Sbjct: 277 GDVYLLGCTNVGKSSLFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLRFPILRPSND 336
Query: 93 KVKELGKKILLSQVKGKNMSKTEK 116
+V + K++L + + M K +
Sbjct: 337 RVYQRFKRLLAERSEKAAMEKERR 360
>gi|345312871|ref|XP_003429311.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf14
homolog [Ornithorhynchus anatinus]
Length = 711
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN LQSD C K ++ I RAT SPWPGTTLNLLK I T
Sbjct: 340 GDVYLVGATNAGKSTLFNTLLQSDYCTAKGAEAIDRATISPWPGTTLNLLKFPISNPTPY 399
Query: 93 KVKELGKKILLSQVKG-KNMSKTEKKPL 119
++ + K++ K +++SK E+K L
Sbjct: 400 RMFKRHKRLKEDAAKAEEDLSKQEQKHL 427
>gi|291223758|ref|XP_002731875.1| PREDICTED: GI18656-like [Saccoglossus kowalevskii]
Length = 765
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 43/51 (84%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVGCTNVGKSTLFN L+SD CK K S+++ +AT S WPGTTLNLLK
Sbjct: 505 GDVYLVGCTNVGKSTLFNRLLESDYCKTKVSNILHKATISLWPGTTLNLLK 555
>gi|195584491|ref|XP_002082038.1| GD11344 [Drosophila simulans]
gi|194194047|gb|EDX07623.1| GD11344 [Drosophila simulans]
Length = 499
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVGCTNVGKS+LFN L SD C+ +ASDL+ +ATT PWPGTTL LL+
Sbjct: 152 GDVYLVGCTNVGKSSLFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLR 202
>gi|328776445|ref|XP_396974.4| PREDICTED: uncharacterized protein C4orf14-like [Apis mellifera]
Length = 546
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 42/51 (82%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVGCTNVGKS+LFN L SD CK+KA DL+ AT S WPGTTLNLLK
Sbjct: 319 GDVYLVGCTNVGKSSLFNTLLNSDYCKVKAIDLVQCATVSTWPGTTLNLLK 369
>gi|301616297|ref|XP_002937599.1| PREDICTED: uncharacterized protein C4orf14-like [Xenopus (Silurana)
tropicalis]
Length = 710
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 42/51 (82%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN LQSD CK KAS++I AT SPWPGTTL+LLK
Sbjct: 341 GDVYLVGATNAGKSTLFNTLLQSDYCKEKASEIIKEATISPWPGTTLDLLK 391
>gi|326918771|ref|XP_003205661.1| PREDICTED: uncharacterized protein C4orf14-like [Meleagris
gallopavo]
Length = 381
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 9/95 (9%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------- 83
AGDVYL+G TN GKSTLFNA L SD CK +A D++ RAT S WPGTTLNLLK
Sbjct: 52 AGDVYLLGATNSGKSTLFNALLLSDYCKSRAPDVVGRATVSAWPGTTLNLLKFPIINPTC 111
Query: 84 -EIIKIQTVCKVKELGKKILLSQVKGKNMSKTEKK 117
I + Q K + L + LS + K++++ +K+
Sbjct: 112 DRIFRRQERLKEEALKTEDQLSDEEKKHLNRLKKR 146
>gi|13543019|gb|AAH05689.1| 2610024G14Rik protein, partial [Mus musculus]
Length = 387
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 35 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 85
>gi|432111608|gb|ELK34710.1| hypothetical protein MDA_GLEAN10015808 [Myotis davidii]
Length = 602
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT S WPGTTLNLLK I T
Sbjct: 246 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISSWPGTTLNLLKFPICNPTPY 305
Query: 93 KVKELGKKILLSQVKG-KNMSKTEKKPL 119
++ E GK++ + +++S+ EKK L
Sbjct: 306 RMFERGKRLKKYATEAEEDLSQLEKKQL 333
>gi|344247351|gb|EGW03455.1| Uncharacterized protein C4orf14-like [Cricetulus griseus]
Length = 474
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 121 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 171
>gi|348571722|ref|XP_003471644.1| PREDICTED: uncharacterized protein C4orf14-like [Cavia porcellus]
Length = 685
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN LQSD C K ++ I RAT SPWPGTTLNLLK I T
Sbjct: 332 GDVYLVGATNTGKSTLFNTLLQSDYCTAKGAEAIDRATISPWPGTTLNLLKFPICNPTPY 391
Query: 93 KVKELGKKILLSQVKGKNMSKTEKKPLQPQ 122
++ E K++ KN S ++ L Q
Sbjct: 392 RMFERQKRL-------KNDSSKSEEDLNEQ 414
>gi|348511900|ref|XP_003443481.1| PREDICTED: uncharacterized protein C4orf14 homolog [Oreochromis
niloticus]
Length = 630
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/89 (53%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-EIIKIQTV 91
GDVYLVG N GKSTLFN L+SD CK +AS++I +AT SPWPGTTLNLLK II
Sbjct: 264 GDVYLVGSANAGKSTLFNTLLESDYCKSRASNVIHKATISPWPGTTLNLLKFPIINPTPY 323
Query: 92 CKVKELGKKILLSQVKGKNMSKTEKKPLQ 120
K + SQ K +S E K LQ
Sbjct: 324 RMFKRQERLKEASQQKESELSPEELKRLQ 352
>gi|432961268|ref|XP_004086582.1| PREDICTED: nitric oxide-associated protein 1-like [Oryzias latipes]
Length = 645
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 42/51 (82%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG N GKSTLFN L+SD CK +ASD+I +AT SPWPGTTLNLLK
Sbjct: 283 GDVYLVGSANAGKSTLFNTLLESDYCKSRASDVIHKATISPWPGTTLNLLK 333
>gi|194753380|ref|XP_001958990.1| GF12654 [Drosophila ananassae]
gi|190620288|gb|EDV35812.1| GF12654 [Drosophila ananassae]
Length = 566
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYL+GCTNVGKS+LFN L SD C+ +ASDL+ +ATT PWPGTTL LL+
Sbjct: 220 GDVYLLGCTNVGKSSLFNILLNSDYCRPEASDLVRQATTCPWPGTTLKLLR 270
>gi|402869723|ref|XP_003898897.1| PREDICTED: nitric oxide-associated protein 1 [Papio anubis]
Length = 698
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
>gi|109074713|ref|XP_001082521.1| PREDICTED: uncharacterized protein C4orf14 isoform 4 [Macaca
mulatta]
gi|355687403|gb|EHH25987.1| hypothetical protein EGK_15861 [Macaca mulatta]
Length = 698
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
>gi|380790571|gb|AFE67161.1| nitric oxide-associated protein 1 [Macaca mulatta]
Length = 698
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
>gi|383422155|gb|AFH34291.1| mitochondrial nitric oxide synthase [Macaca mulatta]
Length = 698
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
>gi|410931221|ref|XP_003978994.1| PREDICTED: LOW QUALITY PROTEIN: nitric oxide-associated protein
1-like [Takifugu rubripes]
Length = 696
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 57/88 (64%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG N GKSTLFN L+SD CK +ASD++ +AT SPWPGTTLN LK I T
Sbjct: 332 GDVYLVGLANAGKSTLFNTLLESDYCKSRASDVVHKATISPWPGTTLNXLKFPIMNPTPH 391
Query: 93 KVKELGKKILLSQVKGKNMSKTEKKPLQ 120
++ +++ ++ + + E+K LQ
Sbjct: 392 RMFRRQRRLDAARRTEAELPQDERKRLQ 419
>gi|26374633|dbj|BAC25338.1| unnamed protein product [Mus musculus]
Length = 633
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 281 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 331
>gi|22760732|dbj|BAC11311.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
>gi|332819696|ref|XP_001136575.2| PREDICTED: nitric oxide-associated protein 1 isoform 2 [Pan
troglodytes]
Length = 721
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 362 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 412
>gi|193785926|dbj|BAG54713.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
>gi|14150078|ref|NP_115689.1| nitric oxide-associated protein 1 [Homo sapiens]
gi|93204549|sp|Q8NC60.2|NOA1_HUMAN RecName: Full=Nitric oxide-associated protein 1
gi|13436155|gb|AAH04894.1| Chromosome 4 open reading frame 14 [Homo sapiens]
gi|119625923|gb|EAX05518.1| chromosome 4 open reading frame 14 [Homo sapiens]
gi|123981912|gb|ABM82785.1| chromosome 4 open reading frame 14 [synthetic construct]
gi|123996745|gb|ABM85974.1| chromosome 4 open reading frame 14 [synthetic construct]
Length = 698
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
>gi|167555073|ref|NP_001107900.1| nitric oxide-associated protein 1 [Danio rerio]
gi|161611968|gb|AAI55838.1| Zgc:175125 protein [Danio rerio]
Length = 702
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYL+G N GKSTLFN L+SD CK A+D I RAT SPWPGTTLNLLK
Sbjct: 343 GDVYLIGMANAGKSTLFNTLLESDYCKSTAADAIHRATISPWPGTTLNLLK 393
>gi|332238539|ref|XP_003268458.1| PREDICTED: nitric oxide-associated protein 1 [Nomascus leucogenys]
Length = 720
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 361 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 411
>gi|397469835|ref|XP_003806545.1| PREDICTED: nitric oxide-associated protein 1 [Pan paniscus]
Length = 698
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
>gi|410249398|gb|JAA12666.1| chromosome 4 open reading frame 14 [Pan troglodytes]
gi|410304802|gb|JAA31001.1| chromosome 4 open reading frame 14 [Pan troglodytes]
gi|410331893|gb|JAA34893.1| chromosome 4 open reading frame 14 [Pan troglodytes]
Length = 698
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
>gi|90085443|dbj|BAE91462.1| unnamed protein product [Macaca fascicularis]
Length = 631
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 272 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 322
>gi|302565204|ref|NP_001180617.1| nitric oxide-associated protein 1 [Macaca mulatta]
Length = 631
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 272 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 322
>gi|363733412|ref|XP_420579.3| PREDICTED: uncharacterized protein C4orf14 [Gallus gallus]
Length = 581
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 9/95 (9%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------- 83
AGDVYL+G TN GKSTLFNA L SD CK +A D+++RAT S WPGTTLNLLK
Sbjct: 227 AGDVYLLGATNSGKSTLFNALLLSDYCKSRAPDVVNRATVSSWPGTTLNLLKFPIINPTC 286
Query: 84 -EIIKIQTVCKVKELGKKILLSQVKGKNMSKTEKK 117
I + Q K + L + LS + K++++ +K+
Sbjct: 287 DRIFRRQERLKEEALKTEDQLSDKEKKHLNRLKKQ 321
>gi|354498862|ref|XP_003511531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf14
homolog [Cricetulus griseus]
Length = 691
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 338 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 388
>gi|21758184|dbj|BAC05262.1| unnamed protein product [Homo sapiens]
Length = 623
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 264 GDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 314
>gi|149035170|gb|EDL89874.1| MMR_HSR1 domain containing protein RGD1359460, isoform CRA_b
[Rattus norvegicus]
Length = 529
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 341 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 391
>gi|74196806|dbj|BAE43128.1| unnamed protein product [Mus musculus]
Length = 435
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 334 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 384
>gi|9790049|ref|NP_062810.1| nitric oxide-associated protein 1 [Mus musculus]
gi|81906657|sp|Q9JJG9.1|NOA1_MOUSE RecName: Full=Nitric oxide-associated protein 1
gi|7670340|dbj|BAA95022.1| unnamed protein product [Mus musculus]
gi|12857220|dbj|BAB30935.1| unnamed protein product [Mus musculus]
gi|16877845|gb|AAH17154.1| RIKEN cDNA 2610024G14 gene [Mus musculus]
gi|148705986|gb|EDL37933.1| RIKEN cDNA 2610024G14, isoform CRA_a [Mus musculus]
Length = 693
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 341 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 391
>gi|55741504|ref|NP_001006960.1| nitric oxide-associated protein 1 [Rattus norvegicus]
gi|53733609|gb|AAH83902.1| MMR_HSR1 domain containing protein RGD1359460 [Rattus norvegicus]
Length = 594
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 341 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 391
>gi|74178704|dbj|BAE34011.1| unnamed protein product [Mus musculus]
Length = 693
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 341 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 391
>gi|403284581|ref|XP_003933641.1| PREDICTED: nitric oxide-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 704
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT SPWPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTLLESDYCTAKGAEAIDRATISPWPGTTLNLLK 389
>gi|297673511|ref|XP_002814799.1| PREDICTED: nitric oxide-associated protein 1 [Pongo abelii]
Length = 698
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN FL+SD C K S+ I RAT S WPGTTLNLLK
Sbjct: 339 GDVYLVGATNAGKSTLFNTFLESDYCTAKGSEAIDRATISSWPGTTLNLLK 389
>gi|149035169|gb|EDL89873.1| MMR_HSR1 domain containing protein RGD1359460, isoform CRA_a
[Rattus norvegicus]
Length = 694
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K S+ I RAT SPWPGTTLNLLK
Sbjct: 341 GDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 391
>gi|296196477|ref|XP_002745854.1| PREDICTED: nitric oxide-associated protein 1 [Callithrix jacchus]
Length = 696
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT SPWPGTTLNLLK
Sbjct: 331 GDVYLVGATNAGKSTLFNTLLESDYCTAKGAEAIDRATISPWPGTTLNLLK 381
>gi|355737025|gb|AES12187.1| hypothetical protein [Mustela putorius furo]
Length = 445
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT SPWPGTTLNLLK I T
Sbjct: 84 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISPWPGTTLNLLKFPICNPTPY 143
Query: 93 KVKELGKKILLSQVKG-KNMSKTEKKPL 119
++ E K++ + + +++S+ E+ L
Sbjct: 144 RMFERQKRLEKTAAEAEEDLSQQEQHQL 171
>gi|194880981|ref|XP_001974627.1| GG21848 [Drosophila erecta]
gi|190657814|gb|EDV55027.1| GG21848 [Drosophila erecta]
Length = 623
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYL+GCTNVGKS+LFN L SD C+ +A+DL+ +AT PWPGTTL LL+
Sbjct: 277 GDVYLLGCTNVGKSSLFNILLNSDYCRPEATDLVRKATACPWPGTTLKLLR 327
>gi|47197602|emb|CAF88049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 360
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG N GKSTLFN L+SD CK +AS++ +AT SPWPGTTLNLL+
Sbjct: 151 GDVYLVGVANAGKSTLFNTLLESDYCKSRASEVTRKATISPWPGTTLNLLR 201
>gi|195123554|ref|XP_002006270.1| GI18656 [Drosophila mojavensis]
gi|193911338|gb|EDW10205.1| GI18656 [Drosophila mojavensis]
Length = 547
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
V + GDVYLVGCTNVGKS+LFN L SD C+ +AS+L+ +ATT WPGTTL +LK I
Sbjct: 198 VWAYKGDVYLVGCTNVGKSSLFNILLNSDYCRPEASELVRKATTCAWPGTTLQMLKFPIL 257
Query: 88 IQTVCKVKELGKKILLSQVKGKNMSKTEKK 117
+ ++ + K++ + + + K ++
Sbjct: 258 RPSDIRIYQRYKRLFAEREQRAALEKMRRE 287
>gi|431893876|gb|ELK03693.1| hypothetical protein PAL_GLEAN10016134 [Pteropus alecto]
Length = 696
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/96 (51%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT SPWPGTTLNLLK I T
Sbjct: 341 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISPWPGTTLNLLKFPICNPTPY 400
Query: 93 KVKELGKKILLSQVKGKNMSKTEKKPL-QPQYSLIK 127
++ E K++ K N ++ + L Q Q SL+K
Sbjct: 401 RMFERQKRL----KKDANEAEEDLSQLEQNQLSLLK 432
>gi|349604286|gb|AEP99881.1| Uncharacterized protein C4orf14-like protein-like protein,
partial [Equus caballus]
Length = 402
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I +AT SPWPGTTLNLLK
Sbjct: 44 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDKATISPWPGTTLNLLK 94
>gi|296486559|tpg|DAA28672.1| TPA: hypothetical protein LOC539773 [Bos taurus]
gi|440903359|gb|ELR54030.1| hypothetical protein M91_21392 [Bos grunniens mutus]
Length = 694
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT SPWPGTTLNLLK
Sbjct: 340 GDVYLVGSTNAGKSTLFNTLLESDYCIAKGAEAIDRATISPWPGTTLNLLK 390
>gi|281352498|gb|EFB28082.1| hypothetical protein PANDA_006562 [Ailuropoda melanoleuca]
Length = 687
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT SPWPGTTLNLLK
Sbjct: 333 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISPWPGTTLNLLK 383
>gi|301765480|ref|XP_002918164.1| PREDICTED: uncharacterized protein C4orf14-like [Ailuropoda
melanoleuca]
Length = 688
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT SPWPGTTLNLLK
Sbjct: 333 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISPWPGTTLNLLK 383
>gi|47212015|emb|CAF95421.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG N GKSTLFN L+SD CK +AS++ +AT SPWPGTTLNLL+
Sbjct: 222 GDVYLVGVANAGKSTLFNTLLESDYCKSRASEVTRKATISPWPGTTLNLLR 272
>gi|84000349|ref|NP_001033277.1| nitric oxide-associated protein 1 [Bos taurus]
gi|93204548|sp|Q32LB9.1|NOA1_BOVIN RecName: Full=Nitric oxide-associated protein 1
gi|81673530|gb|AAI09655.1| Chromosome 4 open reading frame 14 ortholog [Bos taurus]
Length = 694
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT SPWPGTTLNLLK
Sbjct: 340 GDVYLVGSTNAGKSTLFNTLLESDYCIAKGAEAIDRATISPWPGTTLNLLK 390
>gi|73975317|ref|XP_854207.1| PREDICTED: uncharacterized protein C4orf14 [Canis lupus familiaris]
Length = 700
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN L SD C K ++ I RAT SPWPGTTLNLLK I T
Sbjct: 336 GDVYLVGATNAGKSTLFNTLLGSDYCIAKGAEAIDRATISPWPGTTLNLLKFPICNPTPY 395
Query: 93 KVKELGKKILLSQVKG-KNMSKTEKKPLQ 120
++ E K++ + +N+S E+ L+
Sbjct: 396 RMFERQKRLKKDAAEAEENLSPQEQNQLK 424
>gi|47200956|emb|CAF87804.1| unnamed protein product [Tetraodon nigroviridis]
Length = 379
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG N GKSTLFN L+SD CK +AS++ +AT SPWPGTTLNLL+
Sbjct: 217 GDVYLVGVANAGKSTLFNTLLESDYCKSRASEVTRKATISPWPGTTLNLLR 267
>gi|291401759|ref|XP_002717113.1| PREDICTED: mitochondrial nitric oxide synthase-like [Oryctolagus
cuniculus]
Length = 671
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN L+SD C K ++ I +AT SPWPGTTLNLLK I T
Sbjct: 316 GDVYLVGATNAGKSTLFNTLLESDYCTAKGAEAIDKATISPWPGTTLNLLKFPICNPTPY 375
Query: 93 KVKELGKKILLSQVKG-KNMSKTEKKPLQ 120
++ E K++ K + +S+ E+ L+
Sbjct: 376 RMFERQKRLKEDAAKAEEELSEQEQNRLR 404
>gi|338723448|ref|XP_001916840.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf14
homolog [Equus caballus]
Length = 698
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 40/51 (78%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I +AT SPWPGTTLNLLK
Sbjct: 340 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDKATISPWPGTTLNLLK 390
>gi|308480621|ref|XP_003102517.1| hypothetical protein CRE_04085 [Caenorhabditis remanei]
gi|308261249|gb|EFP05202.1| hypothetical protein CRE_04085 [Caenorhabditis remanei]
Length = 978
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 16/74 (21%)
Query: 26 DLVLSSAGDVYLVGCTNVGKS----------------TLFNAFLQSDLCKIKASDLISRA 69
++ L GD++LVGCTN GKS T+FNA LQSDLCK++A DL+ RA
Sbjct: 564 NVRLGMRGDIFLVGCTNAGKSYVAVFLRKDVDNFIYRTMFNALLQSDLCKVRAVDLVDRA 623
Query: 70 TTSPWPGTTLNLLK 83
TTS WPGTT++LLK
Sbjct: 624 TTSIWPGTTISLLK 637
>gi|195381701|ref|XP_002049584.1| GJ21673 [Drosophila virilis]
gi|194144381|gb|EDW60777.1| GJ21673 [Drosophila virilis]
Length = 647
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYL+GCTNVGKS+LFN L SD C+ +AS+L+ +ATT WPGTTL +LK
Sbjct: 303 GDVYLLGCTNVGKSSLFNILLNSDYCRPEASELVRKATTCAWPGTTLQMLK 353
>gi|410957583|ref|XP_003985405.1| PREDICTED: nitric oxide-associated protein 1 [Felis catus]
Length = 696
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/96 (48%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT S WPGTTLNLLK I T
Sbjct: 340 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISSWPGTTLNLLKFPICNPTPY 399
Query: 93 KVKELGKKILLSQVKG-KNMSKTEKKPLQPQYSLIK 127
++ E K++ K +++S+ E Q Q +L+K
Sbjct: 400 RMFERQKRLKKDATKAEEDLSQQE----QHQLNLLK 431
>gi|260828333|ref|XP_002609118.1| hypothetical protein BRAFLDRAFT_115313 [Branchiostoma floridae]
gi|229294472|gb|EEN65128.1| hypothetical protein BRAFLDRAFT_115313 [Branchiostoma floridae]
Length = 395
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYL+G TNVGKSTLFN L+SD C+ KA ++ RAT S WPGTTLNLL+
Sbjct: 157 GDVYLLGNTNVGKSTLFNRLLESDFCQQKAEEVFQRATISQWPGTTLNLLR 207
>gi|195024484|ref|XP_001985881.1| GH21055 [Drosophila grimshawi]
gi|193901881|gb|EDW00748.1| GH21055 [Drosophila grimshawi]
Length = 649
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYL+GCTNVGKS+LFN L SD C+ +A++L+ +ATT WPGTTL +LK
Sbjct: 305 GDVYLLGCTNVGKSSLFNILLNSDYCRPEATELVRKATTCAWPGTTLQMLK 355
>gi|335293563|ref|XP_003356996.1| PREDICTED: uncharacterized protein C4orf14 homolog [Sus scrofa]
Length = 809
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT S WPGTTLNLLK I T
Sbjct: 344 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISAWPGTTLNLLKFPICNPTPY 403
Query: 93 KVKELGKKILLSQVKG-KNMSKTEKKPLQPQYSLIK 127
++ + K++ V+ +++S+ E Q Q +L+K
Sbjct: 404 RMFQRQKRLKRDAVEAEEDLSQQE----QNQLNLLK 435
>gi|395851373|ref|XP_003798235.1| PREDICTED: nitric oxide-associated protein 1 [Otolemur garnettii]
Length = 688
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 39/51 (76%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT S WPGTTLNLLK
Sbjct: 333 GDVYLVGATNAGKSTLFNTLLKSDYCTAKGAEAIDRATISSWPGTTLNLLK 383
>gi|344288412|ref|XP_003415944.1| PREDICTED: uncharacterized protein C4orf14-like [Loxodonta
africana]
Length = 700
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 39/51 (76%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT S WPGTTLNLLK
Sbjct: 341 GDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISTWPGTTLNLLK 391
>gi|1261908|emb|CAA65719.1| br-1 protein [Helix pomatia]
Length = 433
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 37/50 (74%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV++VG N GKS+LFN L SD CK A DLI RAT S WPGTTLNLLK
Sbjct: 347 DVFIVGTANAGKSSLFNTLLASDYCKNSARDLIQRATISAWPGTTLNLLK 396
>gi|325296863|ref|NP_001191463.1| nitric oxide synthase-like protein [Aplysia californica]
gi|124357861|gb|ABN05382.1| nitric oxide synthase-like protein [Aplysia californica]
Length = 715
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 37/50 (74%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG N GKS+LFN L SD CK A DLI RAT S WPGTTLNLLK
Sbjct: 347 DVYIVGTANSGKSSLFNILLSSDYCKHTARDLIQRATVSEWPGTTLNLLK 396
>gi|444516264|gb|ELV11095.1| hypothetical protein TREES_T100016525 [Tupaia chinensis]
Length = 598
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 33/44 (75%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPG 76
GDVYLVG TN GKSTLFN L+SD C K ++ I RAT SPWPG
Sbjct: 336 GDVYLVGATNAGKSTLFNTLLESDYCTAKGAEAIDRATISPWPG 379
>gi|226479004|emb|CAX72997.1| hypothetical protein [Schistosoma japonicum]
Length = 719
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 26 DLVLS----SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
D +LS S +YL+G TNVGKS+LFN L SDLCK +A + I RAT S WPGTT L
Sbjct: 274 DFLLSKRFHSKSPIYLIGSTNVGKSSLFNRLLLSDLCKSEAKESIHRATISTWPGTTSGL 333
Query: 82 L 82
L
Sbjct: 334 L 334
>gi|358342766|dbj|GAA30889.2| hypothetical protein CLF_104251 [Clonorchis sinensis]
Length = 516
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+ A +Y++G TNVGKS++FN L SD+CK +A + I RAT S WPGTT LLK
Sbjct: 99 FNCAAPIYILGSTNVGKSSIFNRLLLSDVCKSEARETIHRATISDWPGTTAGLLK 153
>gi|405977813|gb|EKC42247.1| Uncharacterized protein C4orf14-like protein [Crassostrea gigas]
Length = 820
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+GDVY++G N GKSTL+N+ L SD C D++ +AT S PGTT+N LK
Sbjct: 454 SGDVYMIGTANSGKSTLYNSLLNSDYCNYHVRDIVPQATVSELPGTTMNTLK 505
>gi|156372752|ref|XP_001629200.1| predicted protein [Nematostella vectensis]
gi|156216194|gb|EDO37137.1| predicted protein [Nematostella vectensis]
Length = 500
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 9/81 (11%)
Query: 10 REVILVARPE----PNIVSADLV-LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKI--KA 62
++V LV+ E P +V LV GD+Y++GC+N GK+TLFN F+ DL + +
Sbjct: 145 KDVCLVSAKEGFGVPQLVQKILVHWDHDGDIYMLGCSNSGKTTLFNTFM--DLLNVHKRR 202
Query: 63 SDLISRATTSPWPGTTLNLLK 83
+++ R+T S WPGTT++L++
Sbjct: 203 GNMLQRSTVSKWPGTTMSLMR 223
>gi|395243805|ref|ZP_10420784.1| Ribosome biogenesis GTPase YqeH [Lactobacillus hominis CRBIP
24.179]
gi|394483855|emb|CCI81792.1| Ribosome biogenesis GTPase YqeH [Lactobacillus hominis CRBIP
24.179]
Length = 370
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCK 93
D+Y VG TNVGKSTL NA L + SDL TTS +PGTTL+ +K I +
Sbjct: 169 DIYFVGTTNVGKSTLINAILS------ERSDLKDLITTSKFPGTTLDEIK--IPLDNGHY 220
Query: 94 VKE----LGKKILLSQVKGKNMSKTE-KKPLQPQ-YSLI 126
+ + L KK L S + GK + E KKPL+P Y L+
Sbjct: 221 LIDTPGILSKKQLASHLTGKELEVVEPKKPLKPATYQLL 259
>gi|196013785|ref|XP_002116753.1| hypothetical protein TRIADDRAFT_60700 [Trichoplax adhaerens]
gi|190580731|gb|EDV20812.1| hypothetical protein TRIADDRAFT_60700 [Trichoplax adhaerens]
Length = 659
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
GD++L+GCTNVGKS+LF + L L K L+ T S WPGTT+ LL+ I+
Sbjct: 321 GDIFLLGCTNVGKSSLFKSLLDY-LYDGKPKTLMRYPTISVWPGTTIGLLRYPIRK---- 375
Query: 93 KVKELGKK 100
K+ LG++
Sbjct: 376 KINNLGRR 383
>gi|340370800|ref|XP_003383934.1| PREDICTED: uncharacterized protein C4orf14 homolog [Amphimedon
queenslandica]
Length = 583
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 8/58 (13%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLIS-------RATTSPWPGTTLNLLK 83
G+VYL+GCTNVGKS+LF LQS LC ++ L + T S WPGTT+ L+K
Sbjct: 240 GNVYLLGCTNVGKSSLFKLLLQS-LCGVQPGQLKTVNEISAPSPTISHWPGTTIGLIK 296
>gi|403379144|ref|ZP_10921201.1| hypothetical protein PJC66_04878 [Paenibacillus sp. JC66]
Length = 369
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TN GKSTL N ++ SDL S TTS +PGTTLN+++
Sbjct: 157 LRQGRDVYVVGATNAGKSTLINRLIKD------YSDLESELTTSHYPGTTLNMVR 205
>gi|385826308|ref|YP_005862650.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|417837997|ref|ZP_12484235.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus johnsonii pf01]
gi|329667752|gb|AEB93700.1| hypothetical protein LJP_1378c [Lactobacillus johnsonii DPC 6026]
gi|338761540|gb|EGP12809.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus johnsonii pf01]
Length = 369
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------EII 86
D+Y VG TNVGKSTL NA + + SDL TTS +PGTTL+ +K +I
Sbjct: 168 DIYFVGTTNVGKSTLINAIINMN------SDLKDVITTSKFPGTTLDEIKIPLSNGHYLI 221
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTE-KKPLQP 121
+ +L S + GK + E KKPL+P
Sbjct: 222 DTPGILNANQLA-----SHLSGKELEVVEPKKPLKP 252
>gi|282851350|ref|ZP_06260715.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|282557318|gb|EFB62915.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
Length = 213
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------EII 86
D+Y VG TNVGKSTL NA + + SDL TTS +PGTTL+ +K +I
Sbjct: 12 DIYFVGTTNVGKSTLINAIINMN------SDLKDVITTSKFPGTTLDEIKIPLSNGHYLI 65
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTE-KKPLQP 121
+ +L S + GK + E KKPL+P
Sbjct: 66 DTPGILNANQLA-----SHLSGKELEVVEPKKPLKP 96
>gi|42519513|ref|NP_965443.1| GTP-binding protein YqeH [Lactobacillus johnsonii NCC 533]
gi|41583801|gb|AAS09409.1| hypothetical protein LJ_1637 [Lactobacillus johnsonii NCC 533]
Length = 369
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------EII 86
D+Y VG TNVGKSTL NA + + SDL TTS +PGTTL+ +K +I
Sbjct: 168 DIYFVGTTNVGKSTLINAIINMN------SDLKDVITTSKFPGTTLDEIKIPLSNGHYLI 221
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTE-KKPLQP 121
+ +L S + GK + E KKPL+P
Sbjct: 222 DTPGILNANQLA-----SHLSGKELEVVEPKKPLKP 252
>gi|227889535|ref|ZP_04007340.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
gi|227850013|gb|EEJ60099.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
Length = 369
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------EII 86
D+Y VG TNVGKSTL NA + + SDL TTS +PGTTL+ +K +I
Sbjct: 168 DIYFVGTTNVGKSTLINAIINMN------SDLKDVITTSKFPGTTLDEIKIPLSNGHYLI 221
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTE-KKPLQP 121
+ +L S + GK + E KKPL+P
Sbjct: 222 DTPGILNANQLA-----SHLSGKELEVVEPKKPLKP 252
>gi|300361205|ref|ZP_07057382.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri JV-V03]
gi|300353824|gb|EFJ69695.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri JV-V03]
Length = 369
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------EII 86
D+Y VG TNVGKSTL NA + + SDL TTS +PGTTL+ +K +I
Sbjct: 168 DIYFVGTTNVGKSTLINAIINMN------SDLKDVITTSKFPGTTLDEIKIPLSNGHYLI 221
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTE-KKPLQP 121
+ +L S + GK + E KKPL+P
Sbjct: 222 DTPGILNANQLA-----SHLSGKELEVVEPKKPLKP 252
>gi|268319902|ref|YP_003293558.1| hypothetical protein FI9785_1431 [Lactobacillus johnsonii FI9785]
gi|262398277|emb|CAX67291.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 369
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------EII 86
D+Y VG TNVGKSTL NA + + SDL TTS +PGTTL+ +K +I
Sbjct: 168 DIYFVGTTNVGKSTLINAIINMN------SDLKDVITTSKFPGTTLDEIKIPLSNGNYLI 221
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTE-KKPLQP 121
+ +L S + GK + E KKPL+P
Sbjct: 222 DTPGILNANQLA-----SHLSGKELEVVEPKKPLKP 252
>gi|116630032|ref|YP_815204.1| GTP-binding protein YqeH [Lactobacillus gasseri ATCC 33323]
gi|311110338|ref|ZP_07711735.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri MV-22]
gi|116095614|gb|ABJ60766.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
gi|311065492|gb|EFQ45832.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri MV-22]
Length = 369
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------EII 86
D+Y VG TNVGKSTL NA + + SDL TTS +PGTTL+ +K +I
Sbjct: 168 DIYFVGTTNVGKSTLINAIINMN------SDLKDVITTSKFPGTTLDEIKIPLSNGHYLI 221
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTE-KKPLQP 121
+ +L S + GK + E KKPL+P
Sbjct: 222 DTPGILNANQLA-----SHLSGKELEVVEPKKPLKP 252
>gi|238853781|ref|ZP_04644147.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri 202-4]
gi|420147894|ref|ZP_14655168.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gasseri CECT 5714]
gi|238833590|gb|EEQ25861.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri 202-4]
gi|398400562|gb|EJN54109.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gasseri CECT 5714]
Length = 369
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------EII 86
D+Y VG TNVGKSTL NA + + SDL TTS +PGTTL+ +K +I
Sbjct: 168 DIYFVGTTNVGKSTLINAIINMN------SDLKDVITTSKFPGTTLDEIKIPLSNGHYLI 221
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTE-KKPLQP 121
+ +L S + GK + E KKPL+P
Sbjct: 222 DTPGILNANQLA-----SHLSGKELEVVEPKKPLKP 252
>gi|392957245|ref|ZP_10322769.1| GTPase YqeH [Bacillus macauensis ZFHKF-1]
gi|391876652|gb|EIT85248.1| GTPase YqeH [Bacillus macauensis ZFHKF-1]
Length = 366
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
L DVY+VGCTNVGKST N ++ + D+I TTS +PGTTLNL+
Sbjct: 157 LREGKDVYVVGCTNVGKSTFINGLIKQ--LGTEQQDII---TTSYFPGTTLNLI 205
>gi|157364503|ref|YP_001471270.1| small GTP-binding protein [Thermotoga lettingae TMO]
gi|166920104|sp|A8F7S2.1|DER_THELT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157315107|gb|ABV34206.1| small GTP-binding protein [Thermotoga lettingae TMO]
Length = 435
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 21/100 (21%)
Query: 27 LVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
L S+ + +VG NVGKS+LFNA L D RAT +P PGTT + + E+I
Sbjct: 172 LFKESSPKIAIVGKPNVGKSSLFNALLNMD-----------RATVTPVPGTTRDPVDEMI 220
Query: 87 KIQTVCKVKELGKKILLSQVKG-KNMSKTEKKPLQPQYSL 125
+I GKK +L G + S+ E+K ++ Q+S+
Sbjct: 221 EIN--------GKKYILVDTAGMRRKSRIERKTIE-QFSI 251
>gi|334137654|ref|ZP_08511083.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF7]
gi|333604818|gb|EGL16203.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF7]
Length = 371
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N + SD SDL S TTS +PGTTL++++
Sbjct: 164 DVYVVGATNVGKSTLINRLI-SDY-----SDLDSELTTSQYPGTTLDMVE 207
>gi|319937329|ref|ZP_08011736.1| hypothetical protein HMPREF9488_02571 [Coprobacillus sp. 29_1]
gi|319807695|gb|EFW04288.1| hypothetical protein HMPREF9488_02571 [Coprobacillus sp. 29_1]
Length = 366
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 21 NIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
+I A + DVY+VG TNVGKST N L+ +++ +LI T S +PGTTLN
Sbjct: 149 DIYDAIMEHRKGRDVYVVGVTNVGKSTFINGLLKH-YAEVEKQNLI---TVSEYPGTTLN 204
Query: 81 LLK 83
L++
Sbjct: 205 LIE 207
>gi|299822864|ref|ZP_07054750.1| ribosome biogenesis GTPase YqeH [Listeria grayi DSM 20601]
gi|299816393|gb|EFI83631.1| ribosome biogenesis GTPase YqeH [Listeria grayi DSM 20601]
Length = 366
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 12/80 (15%)
Query: 6 ALEGREVILVARPEPNIVSADLV-----LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKI 60
L+ ++ +LV+ E N +L+ L DVY+VGCTNVGKSTL N ++
Sbjct: 130 GLQAKDAVLVS-AEKNTGFDELLDTIDDLRGGEDVYIVGCTNVGKSTLINQIIK------ 182
Query: 61 KASDLISRATTSPWPGTTLN 80
+AS + TTS +PGTTL+
Sbjct: 183 RASGESNVVTTSQFPGTTLD 202
>gi|304403895|ref|ZP_07385557.1| ribosome biogenesis GTPase YqeH [Paenibacillus curdlanolyticus YK9]
gi|304346873|gb|EFM12705.1| ribosome biogenesis GTPase YqeH [Paenibacillus curdlanolyticus YK9]
Length = 375
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N +Q SDL + TTS +PGTTL+ +
Sbjct: 168 DVYVVGATNVGKSTLINRIIQD------YSDLDAELTTSRYPGTTLDAVH 211
>gi|224543253|ref|ZP_03683792.1| hypothetical protein CATMIT_02453 [Catenibacterium mitsuokai DSM
15897]
gi|224523786|gb|EEF92891.1| ribosome biogenesis GTPase YqeH [Catenibacterium mitsuokai DSM
15897]
Length = 362
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKST N L++ SD + TTS +PGTTL+L+K
Sbjct: 161 DVYVVGITNVGKSTFINRMLKN------YSDTTNLITTSEFPGTTLDLIK 204
>gi|410456867|ref|ZP_11310718.1| GTPase YqeH [Bacillus bataviensis LMG 21833]
gi|409927249|gb|EKN64392.1| GTPase YqeH [Bacillus bataviensis LMG 21833]
Length = 368
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L + DVY+VGCTNVGKST N ++ +D+I TTS +PGTTL+++K
Sbjct: 158 LRNGKDVYVVGCTNVGKSTFINRIIKE---VTGEADVI---TTSHFPGTTLDIIK 206
>gi|402815729|ref|ZP_10865321.1| ribosome biogenesis GTPase YqeH [Paenibacillus alvei DSM 29]
gi|402506769|gb|EJW17292.1| ribosome biogenesis GTPase YqeH [Paenibacillus alvei DSM 29]
Length = 372
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++ SDL TTS +PGTTL+++
Sbjct: 165 DVYVVGATNVGKSTLINRLIRD------YSDLDGELTTSRYPGTTLDMIH 208
>gi|386726062|ref|YP_006192388.1| hypothetical protein B2K_28655 [Paenibacillus mucilaginosus K02]
gi|384093187|gb|AFH64623.1| hypothetical protein B2K_28655 [Paenibacillus mucilaginosus K02]
Length = 368
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y+VG TNVGKSTL N + SDL + T S +PGTTL+L++
Sbjct: 161 DIYVVGATNVGKSTLINRLIHD------YSDLDAELTVSQYPGTTLDLVR 204
>gi|337748425|ref|YP_004642587.1| hypothetical protein KNP414_04185 [Paenibacillus mucilaginosus
KNP414]
gi|336299614|gb|AEI42717.1| YqeH [Paenibacillus mucilaginosus KNP414]
Length = 368
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y+VG TNVGKSTL N + SDL + T S +PGTTL+L++
Sbjct: 161 DIYVVGATNVGKSTLINRLIHD------YSDLDAELTVSQYPGTTLDLVR 204
>gi|424780547|ref|ZP_18207420.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Catellicoccus marimammalium M35/04/3]
gi|422842949|gb|EKU27396.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Catellicoccus marimammalium M35/04/3]
Length = 371
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL NA +Q+ A S TTS +PGTTL+L++
Sbjct: 168 DVYIVGVTNVGKSTLINAIIQA------AVGEESVITTSQFPGTTLDLIE 211
>gi|357010653|ref|ZP_09075652.1| YqeH [Paenibacillus elgii B69]
Length = 375
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y+VG TNVGKSTL N ++ SDL + T S +PGTTL+L++
Sbjct: 168 DIYVVGATNVGKSTLINRLIRD------YSDLDAELTVSQYPGTTLDLVR 211
>gi|415885594|ref|ZP_11547522.1| GTP-binding protein YqeH [Bacillus methanolicus MGA3]
gi|387591263|gb|EIJ83582.1| GTP-binding protein YqeH [Bacillus methanolicus MGA3]
Length = 368
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 6 ALEGREVILVARPEPNIV----SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
L+ EV LV+ + + + +A DVY+VGCTNVGKST N ++
Sbjct: 131 GLKPEEVFLVSAAKGHFIKETAAAIDEYRQGKDVYVVGCTNVGKSTFINRMIKE---VTG 187
Query: 62 ASDLISRATTSPWPGTTLNLLK 83
DLI TTS +PGTTL+++K
Sbjct: 188 EGDLI---TTSHFPGTTLDIIK 206
>gi|339010606|ref|ZP_08643176.1| GTP binding protein [Brevibacillus laterosporus LMG 15441]
gi|338772761|gb|EGP32294.1| GTP binding protein [Brevibacillus laterosporus LMG 15441]
Length = 379
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 6 ALEGREVILVARPEPNIVSADLVLSSAG------DVYLVGCTNVGKSTLFNAFLQSDLCK 59
L+ EV+LV+ + + D +L+ G DVY+VG TNVGKSTL N L
Sbjct: 140 GLKPNEVVLVSAEKG--IGIDELLARIGEFRKGRDVYIVGVTNVGKSTLINRILHD---- 193
Query: 60 IKASDLISRATTSPWPGTTLN 80
A+D+ TTSP+PGTTL+
Sbjct: 194 YGAADM--EITTSPFPGTTLD 212
>gi|379723335|ref|YP_005315466.1| hypothetical protein PM3016_5625 [Paenibacillus mucilaginosus 3016]
gi|378572007|gb|AFC32317.1| YqeH [Paenibacillus mucilaginosus 3016]
Length = 368
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y+VG TNVGKSTL N + SDL + T S +PGTTL+L++
Sbjct: 161 DIYVVGATNVGKSTLINRLIHD------YSDLDAELTVSQYPGTTLDLVR 204
>gi|294501323|ref|YP_003565023.1| GTP-binding protein [Bacillus megaterium QM B1551]
gi|294351260|gb|ADE71589.1| GTP-binding protein [Bacillus megaterium QM B1551]
Length = 368
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VGCTNVGKST NA ++ D+I TTS +PGTTL+++
Sbjct: 163 DVYVVGCTNVGKSTFINAIIKE---VTGEKDII---TTSQYPGTTLDMI 205
>gi|295706670|ref|YP_003599745.1| GTP-binding protein [Bacillus megaterium DSM 319]
gi|294804329|gb|ADF41395.1| GTP-binding protein [Bacillus megaterium DSM 319]
Length = 368
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VGCTNVGKST NA ++ D+I TTS +PGTTL+++
Sbjct: 163 DVYVVGCTNVGKSTFINAIIKE---VTGEKDII---TTSQYPGTTLDMI 205
>gi|384044834|ref|YP_005492851.1| GTPase family protein [Bacillus megaterium WSH-002]
gi|345442525|gb|AEN87542.1| GTPase family protein [Bacillus megaterium WSH-002]
Length = 368
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VGCTNVGKST NA ++ D+I TTS +PGTTL+++
Sbjct: 163 DVYVVGCTNVGKSTFINAIIKE---VTGEKDII---TTSQYPGTTLDMI 205
>gi|209870498|pdb|3EC1|A Chain A, Structure Of Yqeh Gtpase From Geobacillus
Stearothermophilus (An Atnos1 ATNOA1 ORTHOLOG)
gi|209870499|pdb|3EC1|B Chain B, Structure Of Yqeh Gtpase From Geobacillus
Stearothermophilus (An Atnos1 ATNOA1 ORTHOLOG)
Length = 369
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY+VGCTNVGKST N ++ +A+ + TTS +PGTTL++++
Sbjct: 162 GGDVYVVGCTNVGKSTFINRIIE------EATGKGNVITTSYFPGTTLDMIE 207
>gi|56421060|ref|YP_148378.1| GTP-binding protein YqeH [Geobacillus kaustophilus HTA426]
gi|375009615|ref|YP_004983248.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380902|dbj|BAD76810.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|359288464|gb|AEV20148.1| hypothetical protein GTCCBUS3UF5_28450 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 369
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY+VGCTNVGKST N ++ +A+ + TTS +PGTTL++++
Sbjct: 162 GGDVYVVGCTNVGKSTFINRIIE------EATGKGNVITTSYFPGTTLDMIE 207
>gi|448238803|ref|YP_007402861.1| GTPase [Geobacillus sp. GHH01]
gi|445207645|gb|AGE23110.1| GTPase [Geobacillus sp. GHH01]
Length = 369
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY+VGCTNVGKST N ++ +A+ + TTS +PGTTL++++
Sbjct: 162 GGDVYVVGCTNVGKSTFINRIIE------EATGKGNVITTSYFPGTTLDMIE 207
>gi|261418457|ref|YP_003252139.1| GTP-binding protein YqeH [Geobacillus sp. Y412MC61]
gi|319767582|ref|YP_004133083.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC52]
gi|261374914|gb|ACX77657.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC61]
gi|317112448|gb|ADU94940.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC52]
Length = 369
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY+VGCTNVGKST N ++ +A+ + TTS +PGTTL++++
Sbjct: 162 GGDVYVVGCTNVGKSTFINRIIE------EATGKGNVITTSYFPGTTLDMIE 207
>gi|297529309|ref|YP_003670584.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. C56-T3]
gi|297252561|gb|ADI26007.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. C56-T3]
Length = 369
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY+VGCTNVGKST N ++ +A+ + TTS +PGTTL++++
Sbjct: 162 GGDVYVVGCTNVGKSTFINRIIE------EATGKGNVITTSYFPGTTLDMIE 207
>gi|421873989|ref|ZP_16305598.1| ribosome biogenesis GTPase YqeH [Brevibacillus laterosporus GI-9]
gi|372457100|emb|CCF15147.1| ribosome biogenesis GTPase YqeH [Brevibacillus laterosporus GI-9]
Length = 379
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N L A+D+ TTSP+PGTTL+
Sbjct: 172 DVYIVGVTNVGKSTLINRILHD----YGAADM--EITTSPFPGTTLD 212
>gi|323490035|ref|ZP_08095256.1| GTPase YqeH [Planococcus donghaensis MPA1U2]
gi|323396331|gb|EGA89156.1| GTPase YqeH [Planococcus donghaensis MPA1U2]
Length = 367
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ + SD+I TTS +PGTTL++++
Sbjct: 162 DVYVVGCTNVGKSTFINRVIKQATGQ---SDVI---TTSHFPGTTLDMIE 205
>gi|456011614|gb|EMF45351.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Planococcus halocryophilus Or1]
Length = 367
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ SD+I TTS +PGTTL++++
Sbjct: 162 DVYVVGCTNVGKSTFINRVIKQ---ATGQSDVI---TTSHFPGTTLDMIE 205
>gi|418576003|ref|ZP_13140150.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|418576029|ref|ZP_13140175.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325091|gb|EHY92223.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325751|gb|EHY92882.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 368
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
L+ +VIL++ + ++++A L + DVY+VG TNVGKSTL N ++ + +
Sbjct: 132 GLDAEDVILISAEKNEGIEDLLNAINTLRNNDDVYIVGTTNVGKSTLINKLIERSVGEKN 191
Query: 62 ASDLISRATTSPWPGTTLNLL 82
TTS +PGTTL+++
Sbjct: 192 V------VTTSRFPGTTLDMI 206
>gi|73662470|ref|YP_301251.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494985|dbj|BAE18306.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 368
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
L+ +VIL++ + ++++A L + DVY+VG TNVGKSTL N ++ + +
Sbjct: 132 GLDAEDVILISAEKNEGIEDLLNAINTLRNNDDVYIVGTTNVGKSTLINKLIERSVGEKN 191
Query: 62 ASDLISRATTSPWPGTTLNLL 82
TTS +PGTTL+++
Sbjct: 192 V------VTTSRFPGTTLDMI 206
>gi|352517436|ref|YP_004886753.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
gi|348601543|dbj|BAK94589.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
Length = 369
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q K +D+ TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIVQ------KTADVKELITTSKFPGTTLD 206
>gi|441471183|emb|CCQ20938.1| Uncharacterized protein yqeH [Listeria monocytogenes]
gi|441474312|emb|CCQ24066.1| Uncharacterized protein yqeH [Listeria monocytogenes N53-1]
Length = 306
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|385829792|ref|YP_005867605.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|418037128|ref|ZP_12675517.1| hypothetical protein LLCRE1631_00324 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|326405800|gb|ADZ62871.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|354695007|gb|EHE94635.1| hypothetical protein LLCRE1631_00324 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 401
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++S + D+I TTS +PGTTLN
Sbjct: 202 DVYVVGVTNVGKSTLINAIIKS---ASGSEDVI---TTSRFPGTTLN 242
>gi|406837396|ref|ZP_11096990.1| GTPase YqeH [Lactobacillus vini DSM 20605]
Length = 371
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY VG TNVGKSTL N LQ +A+ + + T S +PGTTL+ +K
Sbjct: 168 DVYFVGVTNVGKSTLINHLLQ------QAAGIKNLITVSRFPGTTLDFIK 211
>gi|239827797|ref|YP_002950421.1| GTP-binding protein YqeH [Geobacillus sp. WCH70]
gi|239808090|gb|ACS25155.1| Nitric-oxide synthase [Geobacillus sp. WCH70]
Length = 370
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N +Q +A+ + TTS +PGTTL++++
Sbjct: 165 DVYVVGCTNVGKSTFINRIIQ------EATGKGNVITTSYFPGTTLDMIE 208
>gi|205374257|ref|ZP_03227056.1| GTP-binding protein YqeH [Bacillus coahuilensis m4-4]
Length = 164
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N +Q + S + TTS +PGTTL++++
Sbjct: 83 DVYIVGCTNVGKSTFINRIIQ------EVSGEKNVITTSHFPGTTLDMIE 126
>gi|384550424|ref|YP_005739676.1| GTPase family protein [Staphylococcus aureus subsp. aureus JKD6159]
gi|302333273|gb|ADL23466.1| GTPase family protein [Staphylococcus aureus subsp. aureus JKD6159]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEAEDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|293374269|ref|ZP_06620597.1| ribosome biogenesis GTPase YqeH [Turicibacter sanguinis PC909]
gi|325844831|ref|ZP_08168283.1| ribosome biogenesis GTPase YqeH [Turicibacter sp. HGF1]
gi|292647102|gb|EFF65084.1| ribosome biogenesis GTPase YqeH [Turicibacter sanguinis PC909]
gi|325489018|gb|EGC91406.1| ribosome biogenesis GTPase YqeH [Turicibacter sp. HGF1]
Length = 369
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKSTL N ++ + D+I TTS +PGTTL++++
Sbjct: 164 DVYIVGCTNVGKSTLVNRIIKR--FTEEREDII---TTSHFPGTTLDIIE 208
>gi|222151493|ref|YP_002560649.1| GTP-binding protein YqeH [Macrococcus caseolyticus JCSC5402]
gi|222120618|dbj|BAH17953.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 396
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
L + DVY+VG TNVGKSTL N +++ + D+I TTS +PGTTL+L+
Sbjct: 188 LRANQDVYVVGTTNVGKSTLINKLIET---SVGEKDVI---TTSHFPGTTLDLI 235
>gi|284801878|ref|YP_003413743.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5578]
gi|284995020|ref|YP_003416788.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5923]
gi|284057440|gb|ADB68381.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5578]
gi|284060487|gb|ADB71426.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5923]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|254827779|ref|ZP_05232466.1| GTP-binding protein YqeH [Listeria monocytogenes FSL N3-165]
gi|258600159|gb|EEW13484.1| GTP-binding protein YqeH [Listeria monocytogenes FSL N3-165]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|422419093|ref|ZP_16496048.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL N1-067]
gi|313633186|gb|EFS00066.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL N1-067]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|418321301|ref|ZP_12932647.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VCU006]
gi|418875536|ref|ZP_13429792.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC93]
gi|421148523|ref|ZP_15608183.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443639852|ref|ZP_21123852.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21196]
gi|365225533|gb|EHM66776.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VCU006]
gi|377769608|gb|EHT93376.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC93]
gi|394331666|gb|EJE57749.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443406127|gb|ELS64711.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21196]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRDNEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|46907719|ref|YP_014108.1| GTP-binding protein YqeH [Listeria monocytogenes serotype 4b str.
F2365]
gi|217964363|ref|YP_002350041.1| GTP-binding protein YqeH [Listeria monocytogenes HCC23]
gi|226224092|ref|YP_002758199.1| hypothetical protein Lm4b_01501b [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|254931426|ref|ZP_05264785.1| GTP-binding protein YqeH [Listeria monocytogenes HPB2262]
gi|290893851|ref|ZP_06556829.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-071]
gi|386008262|ref|YP_005926540.1| GTPase, putative [Listeria monocytogenes L99]
gi|386026863|ref|YP_005947639.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|386732230|ref|YP_006205726.1| GTPase YqeH [Listeria monocytogenes 07PF0776]
gi|404407929|ref|YP_006690644.1| GTPase [Listeria monocytogenes SLCC2376]
gi|405749835|ref|YP_006673301.1| GTPase [Listeria monocytogenes ATCC 19117]
gi|405752711|ref|YP_006676176.1| GTPase [Listeria monocytogenes SLCC2378]
gi|405755649|ref|YP_006679113.1| GTPase [Listeria monocytogenes SLCC2540]
gi|406704264|ref|YP_006754618.1| GTPase, putative [Listeria monocytogenes L312]
gi|417316034|ref|ZP_12102692.1| GTPase YqeH [Listeria monocytogenes J1816]
gi|417317609|ref|ZP_12104221.1| GTPase YqeH [Listeria monocytogenes J1-220]
gi|424823253|ref|ZP_18248266.1| GTP-binding protein [Listeria monocytogenes str. Scott A]
gi|46880988|gb|AAT04285.1| putative GTPase [Listeria monocytogenes serotype 4b str. F2365]
gi|217333633|gb|ACK39427.1| GTPase family protein [Listeria monocytogenes HCC23]
gi|225876554|emb|CAS05263.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|290556568|gb|EFD90104.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-071]
gi|293582976|gb|EFF95008.1| GTP-binding protein YqeH [Listeria monocytogenes HPB2262]
gi|307571072|emb|CAR84251.1| GTPase, putative [Listeria monocytogenes L99]
gi|328465531|gb|EGF36760.1| GTPase YqeH [Listeria monocytogenes J1816]
gi|328474857|gb|EGF45657.1| GTPase YqeH [Listeria monocytogenes J1-220]
gi|332311933|gb|EGJ25028.1| GTP-binding protein [Listeria monocytogenes str. Scott A]
gi|336023444|gb|AEH92581.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|384390988|gb|AFH80058.1| GTPase YqeH [Listeria monocytogenes 07PF0776]
gi|404219035|emb|CBY70399.1| GTPase, putative [Listeria monocytogenes ATCC 19117]
gi|404221911|emb|CBY73274.1| putative GTPase [Listeria monocytogenes SLCC2378]
gi|404224849|emb|CBY76211.1| putative GTPase [Listeria monocytogenes SLCC2540]
gi|404242078|emb|CBY63478.1| putative GTPase [Listeria monocytogenes SLCC2376]
gi|406361294|emb|CBY67567.1| GTPase, putative [Listeria monocytogenes L312]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|49483844|ref|YP_041068.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282904178|ref|ZP_06312066.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C160]
gi|282906005|ref|ZP_06313860.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908916|ref|ZP_06316734.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|283958360|ref|ZP_06375811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295428174|ref|ZP_06820806.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590860|ref|ZP_06949498.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MN8]
gi|415682399|ref|ZP_11447715.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS00]
gi|418564794|ref|ZP_13129215.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21264]
gi|418582523|ref|ZP_13146601.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418597137|ref|ZP_13160670.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21342]
gi|418601018|ref|ZP_13164466.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21345]
gi|418892326|ref|ZP_13446439.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418898231|ref|ZP_13452301.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418901101|ref|ZP_13455157.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418909448|ref|ZP_13463444.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917494|ref|ZP_13471453.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418923278|ref|ZP_13477194.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418982602|ref|ZP_13530310.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418986268|ref|ZP_13533953.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1500]
gi|49241973|emb|CAG40668.1| putative GTPase [Staphylococcus aureus subsp. aureus MRSA252]
gi|282327180|gb|EFB57475.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331297|gb|EFB60811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595796|gb|EFC00760.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C160]
gi|283790509|gb|EFC29326.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295128532|gb|EFG58166.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575746|gb|EFH94462.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MN8]
gi|315195499|gb|EFU25886.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS00]
gi|371975931|gb|EHO93223.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21264]
gi|374395373|gb|EHQ66640.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21342]
gi|374400265|gb|EHQ71384.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21345]
gi|377702498|gb|EHT26820.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704312|gb|EHT28622.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377704883|gb|EHT29192.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377710933|gb|EHT35171.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377730620|gb|EHT54687.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377735237|gb|EHT59273.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377750668|gb|EHT74606.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377752095|gb|EHT76019.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG149]
gi|377761266|gb|EHT85142.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC341D]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
+LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 SLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|16803531|ref|NP_465016.1| GTP-binding protein YqeH [Listeria monocytogenes EGD-e]
gi|386043802|ref|YP_005962607.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes 10403S]
gi|386050467|ref|YP_005968458.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-561]
gi|404283983|ref|YP_006684880.1| GTPase [Listeria monocytogenes SLCC2372]
gi|404410792|ref|YP_006696380.1| GTPase [Listeria monocytogenes SLCC5850]
gi|405758539|ref|YP_006687815.1| GTPase [Listeria monocytogenes SLCC2479]
gi|16410920|emb|CAC99569.1| lmo1491 [Listeria monocytogenes EGD-e]
gi|345537036|gb|AEO06476.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes 10403S]
gi|346424313|gb|AEO25838.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-561]
gi|404230618|emb|CBY52022.1| putative GTPase [Listeria monocytogenes SLCC5850]
gi|404233485|emb|CBY54888.1| putative GTPase [Listeria monocytogenes SLCC2372]
gi|404236421|emb|CBY57823.1| putative GTPase [Listeria monocytogenes SLCC2479]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|418645090|ref|ZP_13207218.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-55]
gi|375023923|gb|EHS17368.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-55]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRDNEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|254824450|ref|ZP_05229451.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-194]
gi|254992210|ref|ZP_05274400.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-064]
gi|255520851|ref|ZP_05388088.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-175]
gi|293593687|gb|EFG01448.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-194]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|254852115|ref|ZP_05241463.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-503]
gi|300764844|ref|ZP_07074834.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|404281049|ref|YP_006681947.1| GTPase [Listeria monocytogenes SLCC2755]
gi|404286913|ref|YP_006693499.1| GTPase [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|258605417|gb|EEW18025.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-503]
gi|300514520|gb|EFK41577.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|404227684|emb|CBY49089.1| putative GTPase [Listeria monocytogenes SLCC2755]
gi|404245842|emb|CBY04067.1| GTPase, putative [Listeria monocytogenes serotype 7 str. SLCC2482]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|422809570|ref|ZP_16857981.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Listeria monocytogenes FSL J1-208]
gi|378753184|gb|EHY63769.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Listeria monocytogenes FSL J1-208]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|422415992|ref|ZP_16492949.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL J1-023]
gi|313623708|gb|EFR93856.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL J1-023]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|89100814|ref|ZP_01173666.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
gi|89084460|gb|EAR63609.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
Length = 367
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N L+ D+I TTS +PGTTL++++
Sbjct: 162 DVYVVGCTNVGKSTFINRILKE---VTGEGDII---TTSHFPGTTLDIIE 205
>gi|47095444|ref|ZP_00233054.1| GTPase, putative [Listeria monocytogenes str. 1/2a F6854]
gi|254912165|ref|ZP_05262177.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254936493|ref|ZP_05268190.1| GTP-binding protein YqeH [Listeria monocytogenes F6900]
gi|386047143|ref|YP_005965475.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes J0161]
gi|47016265|gb|EAL07188.1| GTPase, putative [Listeria monocytogenes serotype 1/2a str. F6854]
gi|258609086|gb|EEW21694.1| GTP-binding protein YqeH [Listeria monocytogenes F6900]
gi|293590137|gb|EFF98471.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345534134|gb|AEO03575.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes J0161]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|422422215|ref|ZP_16499168.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL S4-171]
gi|313637776|gb|EFS03129.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL S4-171]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|289434771|ref|YP_003464643.1| GTPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171015|emb|CBH27557.1| GTPase, putative [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|386053744|ref|YP_005971302.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes Finland
1998]
gi|346646395|gb|AEO39020.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes Finland
1998]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|395242556|ref|ZP_10419553.1| Ribosome biogenesis GTPase YqeH [Lactobacillus pasteurii CRBIP
24.76]
gi|394480288|emb|CCI85793.1| Ribosome biogenesis GTPase YqeH [Lactobacillus pasteurii CRBIP
24.76]
Length = 369
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S+ DVY VG TNVGKSTL NA + K D+ TTS +PGTTL+ ++
Sbjct: 164 STDRDVYFVGTTNVGKSTLINAIID------KMGDIKDLITTSRFPGTTLDRIE 211
>gi|422409721|ref|ZP_16486682.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes FSL F2-208]
gi|313608710|gb|EFR84539.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes FSL F2-208]
Length = 371
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 162 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 207
>gi|47093412|ref|ZP_00231177.1| GTPase, putative [Listeria monocytogenes str. 4b H7858]
gi|424714366|ref|YP_007015081.1| Uncharacterized protein yqeH [Listeria monocytogenes serotype 4b
str. LL195]
gi|47018191|gb|EAL08959.1| GTPase, putative [Listeria monocytogenes str. 4b H7858]
gi|424013550|emb|CCO64090.1| Uncharacterized protein yqeH [Listeria monocytogenes serotype 4b
str. LL195]
Length = 371
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 162 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 207
>gi|404413570|ref|YP_006699157.1| GTPase [Listeria monocytogenes SLCC7179]
gi|404239269|emb|CBY60670.1| putative GTPase [Listeria monocytogenes SLCC7179]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|347548874|ref|YP_004855202.1| hypothetical protein LIV_1447 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981945|emb|CBW85930.1| Putative unknown protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|315282397|ref|ZP_07870817.1| ribosome biogenesis GTPase YqeH [Listeria marthii FSL S4-120]
gi|313613949|gb|EFR87673.1| ribosome biogenesis GTPase YqeH [Listeria marthii FSL S4-120]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|116872920|ref|YP_849701.1| GTP-binding protein YqeH [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741798|emb|CAK20922.1| GTPase family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|433444333|ref|ZP_20409252.1| ribosome biogenesis GTPase YqeH [Anoxybacillus flavithermus
TNO-09.006]
gi|432001625|gb|ELK22498.1| ribosome biogenesis GTPase YqeH [Anoxybacillus flavithermus
TNO-09.006]
Length = 367
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
L+ R+V LV+ + +++A + DVY+VGCTNVGKST N ++ +
Sbjct: 130 GLQPRDVFLVSAHKGYGMKEVMTAIDEYRNGKDVYVVGCTNVGKSTFINRIIK------E 183
Query: 62 ASDLISRATTSPWPGTTLNLLK 83
A+ + TTS +PGTTL++++
Sbjct: 184 ATGKGNVITTSYFPGTTLDMIE 205
>gi|374324962|ref|YP_005078091.1| hypothetical protein HPL003_25760 [Paenibacillus terrae HPL-003]
gi|357203971|gb|AET61868.1| hypothetical protein HPL003_25760 [Paenibacillus terrae HPL-003]
Length = 375
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++ SD+ TTS +PGTTL+++
Sbjct: 168 DVYVVGATNVGKSTLINRLIRD------HSDMEQELTTSRYPGTTLDMVN 211
>gi|315303239|ref|ZP_07873887.1| ribosome biogenesis GTPase YqeH [Listeria ivanovii FSL F6-596]
gi|313628396|gb|EFR96881.1| ribosome biogenesis GTPase YqeH [Listeria ivanovii FSL F6-596]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|418318528|ref|ZP_12929930.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21232]
gi|365242991|gb|EHM83686.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21232]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|288555654|ref|YP_003427589.1| GTPase YqeH [Bacillus pseudofirmus OF4]
gi|288546814|gb|ADC50697.1| GTP-binding protein YqeH putative GTPase [Bacillus pseudofirmus
OF4]
Length = 370
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
L DVY+VGCTNVGKST N + K D TTS +PGTTL+++
Sbjct: 158 LRDGRDVYVVGCTNVGKSTFINRII-----KEFGGDTEQLITTSHFPGTTLDMI 206
>gi|386729298|ref|YP_006195681.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|387602937|ref|YP_005734458.1| GTPase family protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478947|ref|YP_006710377.1| GTPase [Staphylococcus aureus 08BA02176]
gi|418310191|ref|ZP_12921741.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21331]
gi|418978321|ref|ZP_13526122.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|283470875|emb|CAQ50086.1| GTPase family protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237648|gb|EHM78494.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21331]
gi|379993937|gb|EIA15382.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|384230591|gb|AFH69838.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|404440436|gb|AFR73629.1| putative GTPase [Staphylococcus aureus 08BA02176]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|16800594|ref|NP_470862.1| GTP-binding protein YqeH [Listeria innocua Clip11262]
gi|422412980|ref|ZP_16489939.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL S4-378]
gi|423100573|ref|ZP_17088280.1| ribosome biogenesis GTPase YqeH [Listeria innocua ATCC 33091]
gi|16413999|emb|CAC96757.1| lin1526 [Listeria innocua Clip11262]
gi|313618857|gb|EFR90732.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL S4-378]
gi|370792797|gb|EHN60640.1| ribosome biogenesis GTPase YqeH [Listeria innocua ATCC 33091]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VGCTNVGKSTL N ++ +AS + TTS +PGTTL+
Sbjct: 157 LRNGQDVYVVGCTNVGKSTLINRIIK------QASGENNVITTSQFPGTTLD 202
>gi|418994322|ref|ZP_13541957.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG290]
gi|377744119|gb|EHT68097.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG290]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|407476612|ref|YP_006790489.1| ribosome biogenesis protein GTPase YqeH [Exiguobacterium
antarcticum B7]
gi|407060691|gb|AFS69881.1| Ribosome biogenesis protein GTPase YqeH [Exiguobacterium
antarcticum B7]
Length = 368
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCK 93
DVY+VGCTNVGKSTL N + K + + T S +PGTTL+L+ I + C
Sbjct: 161 DVYVVGCTNVGKSTLINQVI-----KRFGEEEEAVITVSHFPGTTLDLID--IPLDDNCN 213
Query: 94 VKE----LGKKILLSQVKGKNMSK-TEKKPLQPQ 122
+ + + + V G+++ T KK ++PQ
Sbjct: 214 LYDTPGIINHHQMAHYVDGRDLKLITPKKEIKPQ 247
>gi|421876418|ref|ZP_16307975.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C10]
gi|372557711|emb|CCF24095.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C10]
Length = 381
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N ++S + +DLI TTS +PGTTL+ ++
Sbjct: 175 LRQGRDVYVVGVTNVGKSTLINQIIKS---RTGVTDLI---TTSRFPGTTLDRIE 223
>gi|282919372|ref|ZP_06327107.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C427]
gi|417887990|ref|ZP_12532109.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21195]
gi|282317182|gb|EFB47556.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C427]
gi|341857019|gb|EGS97846.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21195]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|15924587|ref|NP_372121.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus Mu50]
gi|15927177|ref|NP_374710.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus N315]
gi|148268080|ref|YP_001247023.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus JH9]
gi|150394149|ref|YP_001316824.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus JH1]
gi|156979915|ref|YP_001442174.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus Mu3]
gi|253315366|ref|ZP_04838579.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006382|ref|ZP_05144983.2| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793673|ref|ZP_05642652.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9781]
gi|258411028|ref|ZP_05681308.1| nitric oxide synthase [Staphylococcus aureus A9763]
gi|258420169|ref|ZP_05683124.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9719]
gi|258437428|ref|ZP_05689412.1| nitric-oxide synthase [Staphylococcus aureus A9299]
gi|258443634|ref|ZP_05691973.1| GTP-binding protein YqeH [Staphylococcus aureus A8115]
gi|258446842|ref|ZP_05694996.1| nitric-oxide synthase [Staphylococcus aureus A6300]
gi|258448756|ref|ZP_05696868.1| nitric-oxide synthase [Staphylococcus aureus A6224]
gi|258453573|ref|ZP_05701551.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A5937]
gi|269203224|ref|YP_003282493.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus ED98]
gi|282893098|ref|ZP_06301332.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8117]
gi|282928230|ref|ZP_06335835.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A10102]
gi|295406720|ref|ZP_06816525.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8819]
gi|296276599|ref|ZP_06859106.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus MR1]
gi|297245698|ref|ZP_06929563.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8796]
gi|384864817|ref|YP_005750176.1| GTPase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387150740|ref|YP_005742304.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus aureus 04-02981]
gi|417650984|ref|ZP_12300747.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21172]
gi|417802923|ref|ZP_12449973.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21318]
gi|417894287|ref|ZP_12538306.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21201]
gi|418424745|ref|ZP_12997859.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427739|ref|ZP_13000744.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430582|ref|ZP_13003492.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433724|ref|ZP_13006316.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS4]
gi|418437219|ref|ZP_13009015.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS5]
gi|418440119|ref|ZP_13011820.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS6]
gi|418443137|ref|ZP_13014736.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS7]
gi|418446201|ref|ZP_13017674.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS8]
gi|418449215|ref|ZP_13020600.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS9]
gi|418452026|ref|ZP_13023360.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS10]
gi|418455020|ref|ZP_13026279.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457898|ref|ZP_13029097.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418567012|ref|ZP_13131377.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21272]
gi|418640343|ref|ZP_13202575.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-3]
gi|418652879|ref|ZP_13214842.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-99]
gi|418660818|ref|ZP_13222430.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-122]
gi|418878514|ref|ZP_13432749.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418881280|ref|ZP_13435497.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418884129|ref|ZP_13438322.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886861|ref|ZP_13441009.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418895359|ref|ZP_13449454.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914698|ref|ZP_13468669.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920677|ref|ZP_13474609.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418931901|ref|ZP_13485736.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418991524|ref|ZP_13539185.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419784691|ref|ZP_14310454.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-M]
gi|424768942|ref|ZP_18196179.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CM05]
gi|443637575|ref|ZP_21121650.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21236]
gi|13701395|dbj|BAB42689.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247368|dbj|BAB57759.1| similar to GTPase family protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|147741149|gb|ABQ49447.1| Nitric-oxide synthase [Staphylococcus aureus subsp. aureus JH9]
gi|149946601|gb|ABR52537.1| Nitric-oxide synthase [Staphylococcus aureus subsp. aureus JH1]
gi|156722050|dbj|BAF78467.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257787645|gb|EEV25985.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9781]
gi|257840178|gb|EEV64642.1| nitric oxide synthase [Staphylococcus aureus A9763]
gi|257843880|gb|EEV68274.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9719]
gi|257848633|gb|EEV72621.1| nitric-oxide synthase [Staphylococcus aureus A9299]
gi|257851040|gb|EEV74983.1| GTP-binding protein YqeH [Staphylococcus aureus A8115]
gi|257854417|gb|EEV77366.1| nitric-oxide synthase [Staphylococcus aureus A6300]
gi|257858034|gb|EEV80923.1| nitric-oxide synthase [Staphylococcus aureus A6224]
gi|257864304|gb|EEV87054.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A5937]
gi|262075514|gb|ACY11487.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus ED98]
gi|282590037|gb|EFB95119.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A10102]
gi|282764416|gb|EFC04542.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8117]
gi|285817279|gb|ADC37766.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus aureus 04-02981]
gi|294968467|gb|EFG44491.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8819]
gi|297177349|gb|EFH36601.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8796]
gi|312829984|emb|CBX34826.1| GTPase of unknown function family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|329727168|gb|EGG63624.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21172]
gi|334273571|gb|EGL91914.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21318]
gi|341852432|gb|EGS93321.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21201]
gi|371982716|gb|EHO99864.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21272]
gi|375014907|gb|EHS08578.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-3]
gi|375021047|gb|EHS14554.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-99]
gi|375040058|gb|EHS32964.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-122]
gi|377694636|gb|EHT19001.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377695165|gb|EHT19529.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377713079|gb|EHT37292.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714464|gb|EHT38665.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377723646|gb|EHT47771.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725814|gb|EHT49927.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731023|gb|EHT55081.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377757024|gb|EHT80920.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377764403|gb|EHT88256.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC348]
gi|383363901|gb|EID41227.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-M]
gi|387718027|gb|EIK06022.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS2]
gi|387718094|gb|EIK06088.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387719524|gb|EIK07469.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS1]
gi|387724948|gb|EIK12579.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS4]
gi|387727207|gb|EIK14739.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS5]
gi|387730269|gb|EIK17676.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS6]
gi|387735133|gb|EIK22270.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS8]
gi|387736495|gb|EIK23586.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS9]
gi|387736813|gb|EIK23901.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS7]
gi|387744907|gb|EIK31671.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745073|gb|EIK31835.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746666|gb|EIK33395.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402348333|gb|EJU83325.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CM05]
gi|408423710|emb|CCJ11121.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408425700|emb|CCJ13087.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408427687|emb|CCJ15050.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408429676|emb|CCJ26841.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408431663|emb|CCJ18978.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408433657|emb|CCJ20942.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408435649|emb|CCJ22909.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408437633|emb|CCJ24876.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|443405358|gb|ELS63962.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21236]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|374603054|ref|ZP_09676039.1| nitric-oxide synthase [Paenibacillus dendritiformis C454]
gi|374391367|gb|EHQ62704.1| nitric-oxide synthase [Paenibacillus dendritiformis C454]
Length = 372
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N + SD+ TTS +PGTTL+++
Sbjct: 165 DVYVVGATNVGKSTLINRLIHD------YSDMDRELTTSRYPGTTLDVVH 208
>gi|417897023|ref|ZP_12540966.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21235]
gi|341840289|gb|EGS81809.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21235]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|415692715|ref|ZP_11454635.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS03]
gi|315129875|gb|EFT85865.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS03]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|258424024|ref|ZP_05686906.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9635]
gi|417889889|ref|ZP_12533968.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21200]
gi|418284085|ref|ZP_12896817.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21202]
gi|418308957|ref|ZP_12920538.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21194]
gi|418558984|ref|ZP_13123531.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21252]
gi|418889412|ref|ZP_13443545.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1524]
gi|257845645|gb|EEV69677.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9635]
gi|341855582|gb|EGS96426.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21200]
gi|365164949|gb|EHM56779.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21202]
gi|365236106|gb|EHM77008.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21194]
gi|371976334|gb|EHO93624.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21252]
gi|377752920|gb|EHT76838.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|253732250|ref|ZP_04866415.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733152|ref|ZP_04867317.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|417897885|ref|ZP_12541811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21259]
gi|253724039|gb|EES92768.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728908|gb|EES97637.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|341849387|gb|EGS90530.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21259]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|170016751|ref|YP_001727670.1| GTP-binding protein YqeH [Leuconostoc citreum KM20]
gi|414596537|ref|ZP_11446111.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE E16]
gi|169803608|gb|ACA82226.1| Predicted GTPase [Leuconostoc citreum KM20]
gi|390482558|emb|CCF28172.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE E16]
Length = 381
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N ++S + +DLI TTS +PGTTL+ ++
Sbjct: 175 LRQGRDVYVVGVTNVGKSTLINQIIKS---RTGVTDLI---TTSRFPGTTLDRIE 223
>gi|421879139|ref|ZP_16310612.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C11]
gi|390446938|emb|CCF26732.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C11]
Length = 381
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N ++S + +DLI TTS +PGTTL+ ++
Sbjct: 175 LRQGRDVYVVGVTNVGKSTLINQIIKS---RTGVTDLI---TTSRFPGTTLDRIE 223
>gi|417797344|ref|ZP_12444540.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21305]
gi|334266836|gb|EGL85306.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21305]
Length = 366
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|304380806|ref|ZP_07363473.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|304340682|gb|EFM06615.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
Length = 366
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|21283277|ref|NP_646365.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus MW2]
gi|49486431|ref|YP_043652.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651989|ref|YP_186493.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus COL]
gi|87160501|ref|YP_494251.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195406|ref|YP_500210.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221711|ref|YP_001332533.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509825|ref|YP_001575484.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141132|ref|ZP_03565625.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|258450575|ref|ZP_05698637.1| GTP-binding protein YqeH [Staphylococcus aureus A5948]
gi|262048596|ref|ZP_06021479.1| hypothetical protein SAD30_0992 [Staphylococcus aureus D30]
gi|262051255|ref|ZP_06023479.1| hypothetical protein SA930_1686 [Staphylococcus aureus 930918-3]
gi|282916867|ref|ZP_06324625.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus D139]
gi|282920145|ref|ZP_06327870.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9765]
gi|283770672|ref|ZP_06343564.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus H19]
gi|284024655|ref|ZP_06379053.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus 132]
gi|294848627|ref|ZP_06789373.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9754]
gi|297207684|ref|ZP_06924119.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911765|ref|ZP_07129208.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH70]
gi|379014805|ref|YP_005291041.1| GTPase YqeH [Staphylococcus aureus subsp. aureus VC40]
gi|379021378|ref|YP_005298040.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus M013]
gi|384547829|ref|YP_005737082.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|384862197|ref|YP_005744917.1| GTPase family protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384870137|ref|YP_005752851.1| GTP-binding protein [Staphylococcus aureus subsp. aureus T0131]
gi|385781882|ref|YP_005758053.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386831206|ref|YP_006237860.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387780688|ref|YP_005755486.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|415686213|ref|ZP_11450350.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS01]
gi|416842867|ref|ZP_11905194.1| GTP-binding protein YqeH [Staphylococcus aureus O11]
gi|416846547|ref|ZP_11906596.1| GTP-binding protein YqeH [Staphylococcus aureus O46]
gi|417649327|ref|ZP_12299131.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21189]
gi|417653518|ref|ZP_12303249.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21193]
gi|417799994|ref|ZP_12447126.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21310]
gi|417901075|ref|ZP_12544952.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21266]
gi|418285656|ref|ZP_12898324.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21209]
gi|418313226|ref|ZP_12924720.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21334]
gi|418316433|ref|ZP_12927871.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21340]
gi|418562587|ref|ZP_13127044.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21262]
gi|418571885|ref|ZP_13136105.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21283]
gi|418574394|ref|ZP_13138563.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21333]
gi|418579521|ref|ZP_13143616.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418599941|ref|ZP_13163415.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21343]
gi|418641781|ref|ZP_13203986.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-24]
gi|418648338|ref|ZP_13210382.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-88]
gi|418650659|ref|ZP_13212677.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-91]
gi|418655646|ref|ZP_13217495.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-105]
gi|418659237|ref|ZP_13220925.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-111]
gi|418873209|ref|ZP_13427519.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-125]
gi|418903903|ref|ZP_13457944.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418912207|ref|ZP_13466188.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG547]
gi|418925856|ref|ZP_13479758.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928946|ref|ZP_13482832.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418934567|ref|ZP_13488389.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418948289|ref|ZP_13500606.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-157]
gi|418950693|ref|ZP_13502844.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-160]
gi|418988663|ref|ZP_13536335.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1835]
gi|419773172|ref|ZP_14299183.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CO-23]
gi|422742619|ref|ZP_16796622.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422746109|ref|ZP_16800042.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424785432|ref|ZP_18212235.1| GTP-binding protein YqeH [Staphylococcus aureus CN79]
gi|440707399|ref|ZP_20888098.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21282]
gi|440735047|ref|ZP_20914658.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448741172|ref|ZP_21723142.1| GTP-binding protein YqeH [Staphylococcus aureus KT/314250]
gi|448745071|ref|ZP_21726945.1| GTP-binding protein YqeH [Staphylococcus aureus KT/Y21]
gi|21204717|dbj|BAB95413.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244874|emb|CAG43335.1| putative GTPase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57286175|gb|AAW38269.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87126475|gb|ABD20989.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202964|gb|ABD30774.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150374511|dbj|BAF67771.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160368634|gb|ABX29605.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257861733|gb|EEV84532.1| GTP-binding protein YqeH [Staphylococcus aureus A5948]
gi|259160892|gb|EEW45912.1| hypothetical protein SA930_1686 [Staphylococcus aureus 930918-3]
gi|259163243|gb|EEW47802.1| hypothetical protein SAD30_0992 [Staphylococcus aureus D30]
gi|282319354|gb|EFB49706.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus D139]
gi|282594493|gb|EFB99478.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9765]
gi|283460819|gb|EFC07909.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus H19]
gi|294824653|gb|EFG41076.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9754]
gi|296887701|gb|EFH26599.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|298694878|gb|ADI98100.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|300886011|gb|EFK81213.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751426|gb|ADL65603.1| GTPase family protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|315198706|gb|EFU29034.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140517|gb|EFW32371.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144055|gb|EFW35824.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323438562|gb|EGA96309.1| GTP-binding protein YqeH [Staphylococcus aureus O11]
gi|323442801|gb|EGB00426.1| GTP-binding protein YqeH [Staphylococcus aureus O46]
gi|329314272|gb|AEB88685.1| GTP-binding protein [Staphylococcus aureus subsp. aureus T0131]
gi|329728433|gb|EGG64870.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21189]
gi|329733209|gb|EGG69546.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21193]
gi|334272526|gb|EGL90891.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21310]
gi|341846234|gb|EGS87431.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21266]
gi|344177790|emb|CCC88269.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|359830687|gb|AEV78665.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus M013]
gi|364522871|gb|AEW65621.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365169466|gb|EHM60714.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21209]
gi|365236497|gb|EHM77386.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21334]
gi|365241117|gb|EHM81872.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21340]
gi|371973691|gb|EHO91039.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21262]
gi|371978377|gb|EHO95626.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21283]
gi|371979121|gb|EHO96356.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21333]
gi|374363502|gb|AEZ37607.1| GTPase YqeH [Staphylococcus aureus subsp. aureus VC40]
gi|374395530|gb|EHQ66793.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21343]
gi|375018236|gb|EHS11816.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-24]
gi|375026251|gb|EHS19634.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-88]
gi|375027945|gb|EHS21303.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-91]
gi|375036139|gb|EHS29220.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-105]
gi|375036235|gb|EHS29313.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-111]
gi|375366400|gb|EHS70397.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-125]
gi|375373050|gb|EHS76756.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-157]
gi|375376169|gb|EHS79717.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-160]
gi|377697548|gb|EHT21903.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377717756|gb|EHT41931.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377722464|gb|EHT46590.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG547]
gi|377738858|gb|EHT62867.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742918|gb|EHT66903.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744925|gb|EHT68902.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377770661|gb|EHT94422.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383972996|gb|EID89017.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CO-23]
gi|385196598|emb|CCG16227.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|421956842|gb|EKU09171.1| GTP-binding protein YqeH [Staphylococcus aureus CN79]
gi|436431142|gb|ELP28496.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436506155|gb|ELP41994.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21282]
gi|445548086|gb|ELY16342.1| GTP-binding protein YqeH [Staphylococcus aureus KT/314250]
gi|445561610|gb|ELY17803.1| GTP-binding protein YqeH [Staphylococcus aureus KT/Y21]
Length = 366
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|379795955|ref|YP_005325953.1| putative GTPase [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872945|emb|CCE59284.1| putative GTPase [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 366
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIAKVRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|257425721|ref|ZP_05602145.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428382|ref|ZP_05604780.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257431019|ref|ZP_05607399.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
68-397]
gi|257433707|ref|ZP_05610065.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
E1410]
gi|257436621|ref|ZP_05612665.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M876]
gi|282911234|ref|ZP_06319036.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914403|ref|ZP_06322189.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M899]
gi|282924697|ref|ZP_06332365.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C101]
gi|293503477|ref|ZP_06667324.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510494|ref|ZP_06669200.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M809]
gi|293531034|ref|ZP_06671716.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M1015]
gi|384867430|ref|YP_005747626.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH60]
gi|257271415|gb|EEV03561.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275223|gb|EEV06710.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278449|gb|EEV09085.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
68-397]
gi|257281800|gb|EEV11937.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
E1410]
gi|257283972|gb|EEV14095.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M876]
gi|282313532|gb|EFB43927.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C101]
gi|282321584|gb|EFB51909.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M899]
gi|282324929|gb|EFB55239.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WBG10049]
gi|290920302|gb|EFD97368.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095143|gb|EFE25408.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466858|gb|EFF09378.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M809]
gi|312437935|gb|ADQ77006.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH60]
Length = 366
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|398818043|ref|ZP_10576642.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. BC25]
gi|398028841|gb|EJL22344.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. BC25]
Length = 373
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKST+ N L A++L TTSP+PGTTL+
Sbjct: 159 LRKGRDVYIVGVTNVGKSTMINRILHD----YGAAEL--EITTSPFPGTTLD 204
>gi|389815855|ref|ZP_10207103.1| GTPase YqeH [Planococcus antarcticus DSM 14505]
gi|388465578|gb|EIM07894.1| GTPase YqeH [Planococcus antarcticus DSM 14505]
Length = 367
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ +A+ TTS +PGTTL++++
Sbjct: 162 DVYVVGCTNVGKSTFINRVIK------QATGQADVITTSHFPGTTLDMIE 205
>gi|418906541|ref|ZP_13460567.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377763446|gb|EHT87302.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC345D]
Length = 366
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|375309512|ref|ZP_09774793.1| hypothetical protein WG8_3318 [Paenibacillus sp. Aloe-11]
gi|375078821|gb|EHS57048.1| hypothetical protein WG8_3318 [Paenibacillus sp. Aloe-11]
Length = 375
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N ++ SD+ TTS +PGTTL+++
Sbjct: 163 LRDNRDVYVVGATNVGKSTLINRLIRD------YSDMEQELTTSRYPGTTLDMVN 211
>gi|365157946|ref|ZP_09354190.1| ribosome biogenesis GTPase YqeH [Bacillus smithii 7_3_47FAA]
gi|363622356|gb|EHL73522.1| ribosome biogenesis GTPase YqeH [Bacillus smithii 7_3_47FAA]
Length = 368
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 10/74 (13%)
Query: 11 EVILVARPEPNIVSADLVL----SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLI 66
+VILV+ + + + + + + DVY+VGCTNVGKST N L+ ++ +LI
Sbjct: 136 DVILVSASKGHFIREAMEMIEHYRAGKDVYVVGCTNVGKSTFINRILKESG---ESGELI 192
Query: 67 SRATTSPWPGTTLN 80
TTS +PGTTL+
Sbjct: 193 ---TTSHFPGTTLD 203
>gi|228475982|ref|ZP_04060690.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis SK119]
gi|314936283|ref|ZP_07843630.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis subsp.
hominis C80]
gi|418619924|ref|ZP_13182735.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis VCU122]
gi|228269805|gb|EEK11285.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis SK119]
gi|313654902|gb|EFS18647.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis subsp.
hominis C80]
gi|374823487|gb|EHR87482.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis VCU122]
Length = 366
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPEPNIVSADL----VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE EV+L++ + + A L + DVY+VG TNVGKSTL N ++ +
Sbjct: 130 GLEAEEVVLISAHKGWGIDALLESINRFRNHQDVYIVGTTNVGKSTLINKLIEQ---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|310643106|ref|YP_003947864.1| ribosome biogenesis GTPase yqeh [Paenibacillus polymyxa SC2]
gi|309248056|gb|ADO57623.1| Ribosome biogenesis GTPase YqeH [Paenibacillus polymyxa SC2]
gi|392303906|emb|CCI70269.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
Length = 375
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++ SD+ TTS +PGTTL+++
Sbjct: 168 DVYVVGATNVGKSTLINRLIRD------YSDMEQELTTSRYPGTTLDMVN 211
>gi|308069994|ref|YP_003871599.1| hypothetical protein PPE_03243 [Paenibacillus polymyxa E681]
gi|305859273|gb|ADM71061.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 375
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ SD+ TTS +PGTTL+++
Sbjct: 168 DVYVVGATNVGKSTLINRLIRD------YSDMEQELTTSRYPGTTLDMV 210
>gi|390453028|ref|ZP_10238556.1| hypothetical protein PpeoK3_03290 [Paenibacillus peoriae KCTC 3763]
Length = 375
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++ SD+ TTS +PGTTL+++
Sbjct: 168 DVYVVGATNVGKSTLINRLIRD------YSDMEQELTTSRYPGTTLDMVN 211
>gi|358061220|ref|ZP_09147884.1| GTP-binding protein YqeH [Staphylococcus simiae CCM 7213]
gi|357256313|gb|EHJ06697.1| GTP-binding protein YqeH [Staphylococcus simiae CCM 7213]
Length = 366
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +++L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDIVLISAEKGWGIEDLLSSIAKIRQHEDVYVVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|315658127|ref|ZP_07910999.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis M23590]
gi|315496456|gb|EFU84779.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis M23590]
Length = 366
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE EV+L++ + ++++A DVY+VG TNVGKSTL N ++ +
Sbjct: 130 GLEAEEVVLISAEKGWGIEDLLTAINQNRDHDDVYIVGTTNVGKSTLINKLIE---LSVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|15613886|ref|NP_242189.1| GTP-binding protein YqeH [Bacillus halodurans C-125]
gi|10173939|dbj|BAB05042.1| BH1323 [Bacillus halodurans C-125]
Length = 367
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
L DVY+VG TNVGKST N +Q I D TTS +PGTTL+++
Sbjct: 158 LRKGKDVYVVGATNVGKSTFINKMIQ-----IFGGDEEQMITTSHFPGTTLDMI 206
>gi|418637114|ref|ZP_13199444.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis VCU139]
gi|374839804|gb|EHS03312.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis VCU139]
Length = 366
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE EV+L++ + ++++A DVY+VG TNVGKSTL N ++ +
Sbjct: 130 GLEAEEVVLISAEKGWGIEDLLTAINQNRDHDDVYIVGTTNVGKSTLINKLIE---LSVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|387929813|ref|ZP_10132490.1| GTPase YqeH [Bacillus methanolicus PB1]
gi|387586631|gb|EIJ78955.1| GTPase YqeH [Bacillus methanolicus PB1]
Length = 368
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 6 ALEGREVILVARPEPNIV----SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
L+ EV LV+ + + + +A DVY+VGCTNVGKST N ++
Sbjct: 131 GLKPEEVFLVSAAKGHFIKKTAAAIDDYRQGKDVYVVGCTNVGKSTFINRIIKE---VSG 187
Query: 62 ASDLISRATTSPWPGTTLNLLK 83
D+I TTS +PGTTL+++K
Sbjct: 188 EGDII---TTSHFPGTTLDIIK 206
>gi|335040462|ref|ZP_08533590.1| ribosome biogenesis GTPase YqeH [Caldalkalibacillus thermarum
TA2.A1]
gi|334179651|gb|EGL82288.1| ribosome biogenesis GTPase YqeH [Caldalkalibacillus thermarum
TA2.A1]
Length = 365
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDVY+VG TNVGKSTL N L K ++ TTS +PGTTL+++K
Sbjct: 157 GGDVYVVGATNVGKSTLINQIL-----KQAGAEKAPVLTTSRFPGTTLDMIK 203
>gi|421859665|ref|ZP_16291869.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410830763|dbj|GAC42306.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 372
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N + SD+ TTS +PGTTL+++
Sbjct: 165 DVYVVGATNVGKSTLINRLIHD------YSDMERELTTSRYPGTTLDVVH 208
>gi|319651635|ref|ZP_08005762.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
gi|317396702|gb|EFV77413.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
Length = 368
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N L+ D+I TTS +PGTTL++++
Sbjct: 163 DVYVVGCTNVGKSTFINRILKE---VTGEGDVI---TTSHFPGTTLDIIE 206
>gi|251798007|ref|YP_003012738.1| nitric-oxide synthase [Paenibacillus sp. JDR-2]
gi|247545633|gb|ACT02652.1| Nitric-oxide synthase [Paenibacillus sp. JDR-2]
Length = 374
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N + SD+ TTS +PGTTL+
Sbjct: 167 DVYVVGATNVGKSTLINRLIHD------YSDMERELTTSRYPGTTLD 207
>gi|417643756|ref|ZP_12293785.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri VCU121]
gi|445059504|ref|YP_007384908.1| GTPase YqeH [Staphylococcus warneri SG1]
gi|330685473|gb|EGG97127.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU121]
gi|443425561|gb|AGC90464.1| GTPase YqeH [Staphylococcus warneri SG1]
Length = 366
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 6 ALEGREVILVARPEPNIVSADLVLS-----SAGDVYLVGCTNVGKSTLFNAFLQSDLCKI 60
LE +V+L++ + + DL+ S DVY+VG TNVGKSTL N ++ +
Sbjct: 130 GLEAEDVVLISAEKGQGIE-DLLYSINKYRDQEDVYIVGTTNVGKSTLINKLIE---LSV 185
Query: 61 KASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 186 GEKDVV---TTSRFPGTTLDMI 204
>gi|226311575|ref|YP_002771469.1| GTP-binding protein YqeH [Brevibacillus brevis NBRC 100599]
gi|226094523|dbj|BAH42965.1| GTP binding protein [Brevibacillus brevis NBRC 100599]
Length = 373
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKST+ N L A++L TTSP+PGTTL+
Sbjct: 159 LRKGRDVYIVGVTNVGKSTMINRILHD----YGAAEL--EITTSPFPGTTLD 204
>gi|82751199|ref|YP_416940.1| GTP-binding protein YqeH [Staphylococcus aureus RF122]
gi|82656730|emb|CAI81158.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 366
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N ++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIED---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|430750628|ref|YP_007213536.1| ribosome biogenesis GTPase YqeH [Thermobacillus composti KWC4]
gi|430734593|gb|AGA58538.1| ribosome biogenesis GTPase YqeH [Thermobacillus composti KWC4]
Length = 375
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 22 IVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
++ A L D+Y+VG TNVGKSTL N ++ SDL T S +PGTTL+
Sbjct: 156 VIEAIQALRGGRDIYVVGATNVGKSTLINRLIRD------YSDLDRELTVSRYPGTTLDQ 209
Query: 82 LK 83
++
Sbjct: 210 IR 211
>gi|417905371|ref|ZP_12549182.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21269]
gi|341843647|gb|EGS84869.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21269]
Length = 261
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY+VG TNVGKSTL N +++ +
Sbjct: 25 GLEDDDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEA---SVG 81
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 82 EKDVV---TTSRFPGTTLDMI 99
>gi|253574707|ref|ZP_04852047.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845753|gb|EES73761.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. oral taxon 786
str. D14]
Length = 375
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 26 DLVLSSAGD--VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D V + GD VY+VG TNVGKSTL N ++ SDL T S +PGTTL+++
Sbjct: 158 DAVAARRGDRDVYVVGATNVGKSTLINRLIRD------YSDLDQELTVSRYPGTTLDMVH 211
>gi|212638655|ref|YP_002315175.1| GTP-binding protein YqeH [Anoxybacillus flavithermus WK1]
gi|212560135|gb|ACJ33190.1| Predicted GTPase [Anoxybacillus flavithermus WK1]
Length = 372
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
L+ R+V LV+ + +++A + DVY+VGCTNVGKST N ++ +
Sbjct: 135 GLQPRDVFLVSAHKGYGMKEVMTAIDEYRNEKDVYVVGCTNVGKSTFINRIIK------E 188
Query: 62 ASDLISRATTSPWPGTTLNLLK 83
A+ + TTS +PGTTL++++
Sbjct: 189 ATGKGNVITTSYFPGTTLDMIE 210
>gi|399046901|ref|ZP_10739089.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. CF112]
gi|433545543|ref|ZP_20501896.1| GTPase YqeH [Brevibacillus agri BAB-2500]
gi|398055051|gb|EJL47143.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. CF112]
gi|432183198|gb|ELK40746.1| GTPase YqeH [Brevibacillus agri BAB-2500]
Length = 373
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKST+ N L A++L TTSP+PGTTL+
Sbjct: 159 LRKGRDVYIVGVTNVGKSTMINRILHD----YGAAELT--ITTSPFPGTTLD 204
>gi|354582184|ref|ZP_09001086.1| ribosome biogenesis GTPase YqeH [Paenibacillus lactis 154]
gi|353199583|gb|EHB65045.1| ribosome biogenesis GTPase YqeH [Paenibacillus lactis 154]
Length = 374
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKS+L N ++ SDL TTS +PGTTL+++
Sbjct: 167 DVYVVGATNVGKSSLINRLIRD------YSDLEQELTTSRYPGTTLDMVH 210
>gi|365902898|ref|ZP_09440721.1| GTPase YqeH [Lactobacillus malefermentans KCTC 3548]
Length = 378
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++ + K +DLI TTS +PGTTL+ ++
Sbjct: 174 DVYIVGVTNVGKSTLINQIIRQNTGK---ADLI---TTSRFPGTTLDRIE 217
>gi|392972265|ref|ZP_10337657.1| ribosome biogenesis GTPase [Staphylococcus equorum subsp. equorum
Mu2]
gi|403046410|ref|ZP_10901879.1| GTP-binding protein YqeH [Staphylococcus sp. OJ82]
gi|392509978|emb|CCI60960.1| ribosome biogenesis GTPase [Staphylococcus equorum subsp. equorum
Mu2]
gi|402763106|gb|EJX17199.1| GTP-binding protein YqeH [Staphylococcus sp. OJ82]
Length = 366
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 12/82 (14%)
Query: 6 ALEGREVILVARPEPNIVSADLV-----LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKI 60
LE +V+L++ E N DL+ L + +VY+VG TNVGKSTL N ++ +
Sbjct: 130 GLETEDVVLIS-AEKNEGIDDLLASINTLRNNDNVYIVGTTNVGKSTLINKLIER---SV 185
Query: 61 KASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 186 GEKDVV---TTSRFPGTTLDMI 204
>gi|289550632|ref|YP_003471536.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus lugdunensis HKU09-01]
gi|385784260|ref|YP_005760433.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|418413936|ref|ZP_12987152.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180164|gb|ADC87409.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus lugdunensis HKU09-01]
gi|339894516|emb|CCB53797.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|410877574|gb|EKS25466.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 366
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE EV+L++ + ++++A DVY+VG TNVGKSTL N ++ +
Sbjct: 130 GLEAEEVVLISAEKGWGIEDLLTAINQNRDHEDVYIVGTTNVGKSTLINKLIE---LSVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|408790073|ref|ZP_11201706.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus florum 2F]
gi|408520647|gb|EKK20682.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus florum 2F]
Length = 376
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
++ DVY+VG TNVGKSTL N ++ ++S + TTS +PGTTL+L+K
Sbjct: 171 ANGRDVYVVGVTNVGKSTLINQIIR------ESSGIKDVITTSKFPGTTLDLIK 218
>gi|425737432|ref|ZP_18855705.1| GTPase YqeH [Staphylococcus massiliensis S46]
gi|425482780|gb|EKU49936.1| GTPase YqeH [Staphylococcus massiliensis S46]
Length = 366
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 11/77 (14%)
Query: 11 EVILVARPEPNIVSADLV-----LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDL 65
EV+++ E NI L+ DVY+VG TNVGKSTL N +++ + D+
Sbjct: 134 EVVVLLSAEKNIGLETLLETIEKYRGQDDVYIVGTTNVGKSTLINKLIET---SVGEKDV 190
Query: 66 ISRATTSPWPGTTLNLL 82
+ TTS +PGTTL+++
Sbjct: 191 V---TTSRFPGTTLDMI 204
>gi|52081117|ref|YP_079908.1| GTP-binding protein YqeH [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644926|ref|ZP_07999159.1| YqeH protein [Bacillus sp. BT1B_CT2]
gi|404489998|ref|YP_006714104.1| GTPase YqeH [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683094|ref|ZP_17657933.1| GTP-binding protein YqeH [Bacillus licheniformis WX-02]
gi|52004328|gb|AAU24270.1| essential GTPase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348997|gb|AAU41631.1| ribosomal assembly protein YqeH [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317392735|gb|EFV73529.1| YqeH protein [Bacillus sp. BT1B_CT2]
gi|383439868|gb|EID47643.1| GTP-binding protein YqeH [Bacillus licheniformis WX-02]
Length = 366
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ D I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEDDI--ITTSQYPGTTLDAIE 204
>gi|219127817|ref|XP_002184124.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404355|gb|EEC44302.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 710
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 12/61 (19%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA----------TTSPWPGTTLNLL 82
GD+Y+VG N GKSTL N L D K+ S +RA TTSP PGTTL +
Sbjct: 453 GDIYVVGAANAGKSTLLNFVLGQD--KVNRSPGKARAGNRNAFKGAVTTSPLPGTTLKFI 510
Query: 83 K 83
K
Sbjct: 511 K 511
>gi|408411085|ref|ZP_11182268.1| Ribosome biogenesis GTPase YqeH [Lactobacillus sp. 66c]
gi|409349111|ref|ZP_11232656.1| Ribosome biogenesis GTPase YqeH [Lactobacillus equicursoris CIP
110162]
gi|407874748|emb|CCK84074.1| Ribosome biogenesis GTPase YqeH [Lactobacillus sp. 66c]
gi|407878383|emb|CCK84714.1| Ribosome biogenesis GTPase YqeH [Lactobacillus equicursoris CIP
110162]
Length = 369
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
S DVY VG TNVGKSTL NA + K D+ TTS +PGTTL+
Sbjct: 164 SQDQDVYFVGTTNVGKSTLINAIID------KMGDVQDLITTSRFPGTTLD 208
>gi|62719448|gb|AAX93324.1| GTPase [Lactobacillus sanfranciscensis]
Length = 377
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N + +AS TTS +PGTTL+++K
Sbjct: 176 DVYVVGVTNVGKSTLINQIIH------QASGQEQVITTSKFPGTTLDMIK 219
>gi|399516596|ref|ZP_10758193.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Leuconostoc pseudomesenteroides 4882]
gi|398648505|emb|CCJ66220.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Leuconostoc pseudomesenteroides 4882]
Length = 381
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 18/104 (17%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK-------EII 86
DVY+VG TNVGKSTL N ++S + DLI TTS +PGTTL+ ++ ++I
Sbjct: 180 DVYVVGVTNVGKSTLINQIIKS---RTGVQDLI---TTSRFPGTTLDRIEIPLADGHQLI 233
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTEKKP----LQPQYSLI 126
+ K +++ I +K + K E KP L P+ +L
Sbjct: 234 DTPGIIKREQMAHVIADKDLK-YALPKKEIKPRTYQLNPEQTLF 276
>gi|403237575|ref|ZP_10916161.1| GTPase YqeH [Bacillus sp. 10403023]
Length = 369
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + D I TTS +PGTTL+++
Sbjct: 163 DVYVVGCTNVGKSTFINRLIKE--FSGEKEDFI---TTSHFPGTTLDII 206
>gi|403384197|ref|ZP_10926254.1| GTPase YqeH [Kurthia sp. JC30]
Length = 368
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ + D+I TTS +PGTTL++++
Sbjct: 163 DVYVVGCTNVGKSTFINRIIKQATGQ---GDII---TTSYFPGTTLDMIE 206
>gi|347534308|ref|YP_004840978.1| hypothetical protein LSA_06230 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504364|gb|AEN99046.1| Uncharacterized protein yqeH [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 368
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N + +AS TTS +PGTTL+++K
Sbjct: 167 DVYVVGVTNVGKSTLINQIIH------QASGQEQVITTSKFPGTTLDMIK 210
>gi|339623958|ref|ZP_08659747.1| GTPase YqeH [Fructobacillus fructosus KCTC 3544]
Length = 388
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL N ++S K +LI TTS +PGTTL+
Sbjct: 180 LRAGRDVYVVGTTNVGKSTLINQIIKS---KTGVQELI---TTSRFPGTTLD 225
>gi|403668289|ref|ZP_10933564.1| GTPase YqeH [Kurthia sp. JC8E]
Length = 367
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ + D+I TTS +PGTTL++++
Sbjct: 162 DVYVVGCTNVGKSTFINRIIKQATGQ---GDVI---TTSYFPGTTLDMIE 205
>gi|229104967|ref|ZP_04235623.1| hypothetical protein bcere0019_41050 [Bacillus cereus Rock3-28]
gi|423615323|ref|ZP_17591157.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD115]
gi|228678461|gb|EEL32682.1| hypothetical protein bcere0019_41050 [Bacillus cereus Rock3-28]
gi|401261002|gb|EJR67169.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD115]
Length = 368
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|255578453|ref|XP_002530091.1| conserved hypothetical protein [Ricinus communis]
gi|223530402|gb|EEF32290.1| conserved hypothetical protein [Ricinus communis]
Length = 697
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NAF + + K IS+ T +P PGTTL +L+
Sbjct: 431 GNVWVIGAQNAGKSTLINAFAKKEGAK------ISKLTEAPVPGTTLGILR 475
>gi|15672203|ref|NP_266377.1| GTP-binding protein YqeH [Lactococcus lactis subsp. lactis Il1403]
gi|12723078|gb|AAK04319.1|AE006260_2 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403]
Length = 381
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++S + D+I TTS +PGTTL+
Sbjct: 182 DVYVVGVTNVGKSTLINAIIKS---ASGSEDVI---TTSRFPGTTLD 222
>gi|423598348|ref|ZP_17574348.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD078]
gi|401236618|gb|EJR43075.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD078]
Length = 368
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|423452361|ref|ZP_17429214.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X1-1]
gi|423470557|ref|ZP_17447301.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-2]
gi|401139999|gb|EJQ47556.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X1-1]
gi|402436223|gb|EJV68255.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-2]
Length = 368
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|339481026|ref|ZP_08656685.1| GTPase YqeH [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 381
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL N ++S + DLI TTS +PGTTL+
Sbjct: 175 LRHDRDVYVVGVTNVGKSTLINQIIKS---RTGVQDLI---TTSRFPGTTLD 220
>gi|229076010|ref|ZP_04208983.1| hypothetical protein bcere0024_40490 [Bacillus cereus Rock4-18]
gi|229098807|ref|ZP_04229745.1| hypothetical protein bcere0020_40330 [Bacillus cereus Rock3-29]
gi|407706863|ref|YP_006830448.1| stage IV sporulation protein FA [Bacillus thuringiensis MC28]
gi|423440915|ref|ZP_17417821.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X2-1]
gi|423448917|ref|ZP_17425796.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5O-1]
gi|423463980|ref|ZP_17440748.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-1]
gi|423533343|ref|ZP_17509761.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB2-9]
gi|423541402|ref|ZP_17517793.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB4-10]
gi|228684651|gb|EEL38591.1| hypothetical protein bcere0020_40330 [Bacillus cereus Rock3-29]
gi|228707122|gb|EEL59322.1| hypothetical protein bcere0024_40490 [Bacillus cereus Rock4-18]
gi|401129511|gb|EJQ37194.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5O-1]
gi|401172590|gb|EJQ79811.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB4-10]
gi|402417576|gb|EJV49876.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X2-1]
gi|402420247|gb|EJV52518.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-1]
gi|402463562|gb|EJV95262.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB2-9]
gi|407384548|gb|AFU15049.1| Yqeh Gtpase [Bacillus thuringiensis MC28]
Length = 368
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|229117833|ref|ZP_04247197.1| hypothetical protein bcere0017_41040 [Bacillus cereus Rock1-3]
gi|423377807|ref|ZP_17355091.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1O-2]
gi|423547638|ref|ZP_17523996.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB5-5]
gi|423622577|ref|ZP_17598355.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD148]
gi|228665630|gb|EEL21108.1| hypothetical protein bcere0017_41040 [Bacillus cereus Rock1-3]
gi|401179359|gb|EJQ86532.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB5-5]
gi|401260697|gb|EJR66865.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD148]
gi|401636073|gb|EJS53827.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1O-2]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|163942091|ref|YP_001646975.1| GTP-binding protein YqeH [Bacillus weihenstephanensis KBAB4]
gi|229013556|ref|ZP_04170689.1| hypothetical protein bmyco0001_39650 [Bacillus mycoides DSM 2048]
gi|229062034|ref|ZP_04199359.1| hypothetical protein bcere0026_41060 [Bacillus cereus AH603]
gi|229135161|ref|ZP_04263961.1| hypothetical protein bcere0014_40630 [Bacillus cereus BDRD-ST196]
gi|229169083|ref|ZP_04296798.1| hypothetical protein bcere0007_40350 [Bacillus cereus AH621]
gi|423368386|ref|ZP_17345818.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD142]
gi|423489519|ref|ZP_17466201.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BtB2-4]
gi|423495242|ref|ZP_17471886.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER057]
gi|423497964|ref|ZP_17474581.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER074]
gi|423512449|ref|ZP_17488980.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-1]
gi|423519035|ref|ZP_17495516.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-4]
gi|423591669|ref|ZP_17567700.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD048]
gi|423660820|ref|ZP_17635989.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM022]
gi|423669921|ref|ZP_17644950.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM034]
gi|423673875|ref|ZP_17648814.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM062]
gi|163864288|gb|ABY45347.1| Nitric-oxide synthase [Bacillus weihenstephanensis KBAB4]
gi|228614311|gb|EEK71421.1| hypothetical protein bcere0007_40350 [Bacillus cereus AH621]
gi|228648289|gb|EEL04324.1| hypothetical protein bcere0014_40630 [Bacillus cereus BDRD-ST196]
gi|228717186|gb|EEL68861.1| hypothetical protein bcere0026_41060 [Bacillus cereus AH603]
gi|228747716|gb|EEL97586.1| hypothetical protein bmyco0001_39650 [Bacillus mycoides DSM 2048]
gi|401080713|gb|EJP88997.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD142]
gi|401151335|gb|EJQ58787.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER057]
gi|401160090|gb|EJQ67469.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-4]
gi|401161251|gb|EJQ68618.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER074]
gi|401231802|gb|EJR38304.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD048]
gi|401299048|gb|EJS04648.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM034]
gi|401300861|gb|EJS06450.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM022]
gi|401310241|gb|EJS15566.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM062]
gi|402431755|gb|EJV63819.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BtB2-4]
gi|402449420|gb|EJV81257.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-1]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|423400818|ref|ZP_17377991.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-2]
gi|423478477|ref|ZP_17455192.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-1]
gi|401653808|gb|EJS71351.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-2]
gi|402428639|gb|EJV60736.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-1]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|423634841|ref|ZP_17610494.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD156]
gi|401278827|gb|EJR84757.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD156]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|423558081|ref|ZP_17534383.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MC67]
gi|401191349|gb|EJQ98371.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MC67]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|409387283|ref|ZP_11239523.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactococcus raffinolactis 4877]
gi|399205590|emb|CCK20438.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactococcus raffinolactis 4877]
Length = 378
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +++ SD+I TTS +PGTTL+
Sbjct: 175 DVYVVGVTNVGKSTLINAIIKN---ATGDSDVI---TTSRFPGTTLD 215
>gi|30264407|ref|NP_846784.1| GTP-binding protein YqeH [Bacillus anthracis str. Ames]
gi|42783462|ref|NP_980709.1| GTP-binding protein YqeH [Bacillus cereus ATCC 10987]
gi|47569331|ref|ZP_00240015.1| GTPase of unknown function [Bacillus cereus G9241]
gi|47778309|ref|YP_021207.2| GTP-binding protein YqeH [Bacillus anthracis str. 'Ames Ancestor']
gi|49187229|ref|YP_030481.1| GTP-binding protein YqeH [Bacillus anthracis str. Sterne]
gi|49481394|ref|YP_038389.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141172|ref|YP_085660.1| GTP-binding protein YqeH [Bacillus cereus E33L]
gi|65321707|ref|ZP_00394666.1| COG1161: Predicted GTPases [Bacillus anthracis str. A2012]
gi|118479501|ref|YP_896652.1| GTP-binding protein YqeH [Bacillus thuringiensis str. Al Hakam]
gi|165873260|ref|ZP_02217870.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167634670|ref|ZP_02392990.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|167638624|ref|ZP_02396900.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|170687451|ref|ZP_02878668.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|170707440|ref|ZP_02897894.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|177653312|ref|ZP_02935564.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190567041|ref|ZP_03019957.1| GTPase family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196034517|ref|ZP_03101926.1| GTPase family protein [Bacillus cereus W]
gi|196039178|ref|ZP_03106484.1| GTPase family protein [Bacillus cereus NVH0597-99]
gi|196044801|ref|ZP_03112035.1| GTPase family protein [Bacillus cereus 03BB108]
gi|206976038|ref|ZP_03236948.1| GTPase family protein [Bacillus cereus H3081.97]
gi|217961825|ref|YP_002340395.1| GTP-binding protein YqeH [Bacillus cereus AH187]
gi|218905472|ref|YP_002453306.1| GTP-binding protein YqeH [Bacillus cereus AH820]
gi|225866316|ref|YP_002751694.1| GTPase family protein [Bacillus cereus 03BB102]
gi|227817112|ref|YP_002817121.1| GTP-binding protein YqeH [Bacillus anthracis str. CDC 684]
gi|228916967|ref|ZP_04080528.1| hypothetical protein bthur0012_41800 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228929380|ref|ZP_04092403.1| hypothetical protein bthur0010_40660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935656|ref|ZP_04098470.1| hypothetical protein bthur0009_41020 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948049|ref|ZP_04110334.1| hypothetical protein bthur0007_41760 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228987588|ref|ZP_04147704.1| hypothetical protein bthur0001_42580 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229093405|ref|ZP_04224510.1| hypothetical protein bcere0021_41310 [Bacillus cereus Rock3-42]
gi|229123874|ref|ZP_04253067.1| hypothetical protein bcere0016_41600 [Bacillus cereus 95/8201]
gi|229141073|ref|ZP_04269615.1| hypothetical protein bcere0013_41670 [Bacillus cereus BDRD-ST26]
gi|229157950|ref|ZP_04286022.1| hypothetical protein bcere0010_41300 [Bacillus cereus ATCC 4342]
gi|229186575|ref|ZP_04313736.1| hypothetical protein bcere0004_41180 [Bacillus cereus BGSC 6E1]
gi|229198463|ref|ZP_04325167.1| hypothetical protein bcere0001_39910 [Bacillus cereus m1293]
gi|229601475|ref|YP_002868625.1| GTP-binding protein YqeH [Bacillus anthracis str. A0248]
gi|254684092|ref|ZP_05147952.1| GTP-binding protein YqeH [Bacillus anthracis str. CNEVA-9066]
gi|254721926|ref|ZP_05183715.1| GTP-binding protein YqeH [Bacillus anthracis str. A1055]
gi|254741477|ref|ZP_05199164.1| GTP-binding protein YqeH [Bacillus anthracis str. Kruger B]
gi|254750916|ref|ZP_05202955.1| GTP-binding protein YqeH [Bacillus anthracis str. Vollum]
gi|254757756|ref|ZP_05209783.1| GTP-binding protein YqeH [Bacillus anthracis str. Australia 94]
gi|300118672|ref|ZP_07056400.1| GTP-binding protein YqeH [Bacillus cereus SJ1]
gi|301055827|ref|YP_003794038.1| GTPase [Bacillus cereus biovar anthracis str. CI]
gi|375286342|ref|YP_005106781.1| GTPase family protein [Bacillus cereus NC7401]
gi|376268233|ref|YP_005120945.1| GTP-binding protein YqeH like protein [Bacillus cereus F837/76]
gi|384182155|ref|YP_005567917.1| GTPase YqeH [Bacillus thuringiensis serovar finitimus YBT-020]
gi|386738225|ref|YP_006211406.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|402555530|ref|YP_006596801.1| GTPase YqeH [Bacillus cereus FRI-35]
gi|421506589|ref|ZP_15953512.1| GTPase YqeH [Bacillus anthracis str. UR-1]
gi|421638410|ref|ZP_16079006.1| GTPase YqeH [Bacillus anthracis str. BF1]
gi|423354828|ref|ZP_17332453.1| ribosome biogenesis GTPase YqeH [Bacillus cereus IS075]
gi|423373786|ref|ZP_17351125.1| ribosome biogenesis GTPase YqeH [Bacillus cereus AND1407]
gi|423549923|ref|ZP_17526250.1| ribosome biogenesis GTPase YqeH [Bacillus cereus ISP3191]
gi|423570575|ref|ZP_17546820.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A12]
gi|423573985|ref|ZP_17550104.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-D12]
gi|423604015|ref|ZP_17579908.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD102]
gi|30259065|gb|AAP28270.1| ribosome biogenesis protein GTPase YqeH [Bacillus anthracis str.
Ames]
gi|42739391|gb|AAS43317.1| GTPase family protein [Bacillus cereus ATCC 10987]
gi|47552014|gb|AAT33682.2| GTPase family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47554002|gb|EAL12369.1| GTPase of unknown function [Bacillus cereus G9241]
gi|49181156|gb|AAT56532.1| GTPase family protein [Bacillus anthracis str. Sterne]
gi|49332950|gb|AAT63596.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51974641|gb|AAU16191.1| GTP-binding protein [Bacillus cereus E33L]
gi|118418726|gb|ABK87145.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|164711019|gb|EDR16586.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167513472|gb|EDR88842.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|167530122|gb|EDR92857.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|170127684|gb|EDS96557.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|170668646|gb|EDT19392.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|172081594|gb|EDT66666.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190562032|gb|EDV16001.1| GTPase family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195993059|gb|EDX57018.1| GTPase family protein [Bacillus cereus W]
gi|196024289|gb|EDX62962.1| GTPase family protein [Bacillus cereus 03BB108]
gi|196029805|gb|EDX68406.1| GTPase family protein [Bacillus cereus NVH0597-99]
gi|206745790|gb|EDZ57187.1| GTPase family protein [Bacillus cereus H3081.97]
gi|217066660|gb|ACJ80910.1| GTPase family protein [Bacillus cereus AH187]
gi|218536686|gb|ACK89084.1| GTPase family protein [Bacillus cereus AH820]
gi|225786457|gb|ACO26674.1| GTPase family protein [Bacillus cereus 03BB102]
gi|227004029|gb|ACP13772.1| GTPase family protein [Bacillus anthracis str. CDC 684]
gi|228584966|gb|EEK43080.1| hypothetical protein bcere0001_39910 [Bacillus cereus m1293]
gi|228596834|gb|EEK54493.1| hypothetical protein bcere0004_41180 [Bacillus cereus BGSC 6E1]
gi|228625510|gb|EEK82265.1| hypothetical protein bcere0010_41300 [Bacillus cereus ATCC 4342]
gi|228642351|gb|EEK98640.1| hypothetical protein bcere0013_41670 [Bacillus cereus BDRD-ST26]
gi|228659588|gb|EEL15235.1| hypothetical protein bcere0016_41600 [Bacillus cereus 95/8201]
gi|228689999|gb|EEL43802.1| hypothetical protein bcere0021_41310 [Bacillus cereus Rock3-42]
gi|228772129|gb|EEM20579.1| hypothetical protein bthur0001_42580 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228811635|gb|EEM57971.1| hypothetical protein bthur0007_41760 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824016|gb|EEM69834.1| hypothetical protein bthur0009_41020 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830286|gb|EEM75900.1| hypothetical protein bthur0010_40660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228842688|gb|EEM87775.1| hypothetical protein bthur0012_41800 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229265883|gb|ACQ47520.1| GTPase family protein [Bacillus anthracis str. A0248]
gi|298723921|gb|EFI64635.1| GTP-binding protein YqeH [Bacillus cereus SJ1]
gi|300377996|gb|ADK06900.1| GTPase family protein [Bacillus cereus biovar anthracis str. CI]
gi|324328239|gb|ADY23499.1| GTPase YqeH [Bacillus thuringiensis serovar finitimus YBT-020]
gi|358354869|dbj|BAL20041.1| GTPase family protein [Bacillus cereus NC7401]
gi|364514033|gb|AEW57432.1| GTP-binding protein YqeH like protein [Bacillus cereus F837/76]
gi|384388077|gb|AFH85738.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|401085832|gb|EJP94066.1| ribosome biogenesis GTPase YqeH [Bacillus cereus IS075]
gi|401095187|gb|EJQ03247.1| ribosome biogenesis GTPase YqeH [Bacillus cereus AND1407]
gi|401189539|gb|EJQ96589.1| ribosome biogenesis GTPase YqeH [Bacillus cereus ISP3191]
gi|401203771|gb|EJR10606.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A12]
gi|401212554|gb|EJR19297.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-D12]
gi|401245701|gb|EJR52054.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD102]
gi|401796740|gb|AFQ10599.1| GTPase YqeH [Bacillus cereus FRI-35]
gi|401823582|gb|EJT22729.1| GTPase YqeH [Bacillus anthracis str. UR-1]
gi|403394836|gb|EJY92076.1| GTPase YqeH [Bacillus anthracis str. BF1]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|229175010|ref|ZP_04302529.1| hypothetical protein bcere0006_40930 [Bacillus cereus MM3]
gi|423457416|ref|ZP_17434213.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X2-1]
gi|228608471|gb|EEK65774.1| hypothetical protein bcere0006_40930 [Bacillus cereus MM3]
gi|401147800|gb|EJQ55293.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X2-1]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|334186050|ref|NP_191277.4| GTP binding protein [Arabidopsis thaliana]
gi|17064928|gb|AAL32618.1| putative protein [Arabidopsis thaliana]
gi|28059086|gb|AAO29986.1| putative protein [Arabidopsis thaliana]
gi|332646103|gb|AEE79624.1| GTP binding protein [Arabidopsis thaliana]
Length = 660
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NA + D K ++R T +P PGTTL +LK
Sbjct: 393 GNVWVIGAQNAGKSTLINALSKKDGAK------VTRLTEAPVPGTTLGILK 437
>gi|423521806|ref|ZP_17498279.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA4-10]
gi|401176468|gb|EJQ83663.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA4-10]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|228923088|ref|ZP_04086380.1| hypothetical protein bthur0011_40680 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|423582543|ref|ZP_17558654.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD014]
gi|228836586|gb|EEM81935.1| hypothetical protein bthur0011_40680 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401213422|gb|EJR20163.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD014]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|229031986|ref|ZP_04187971.1| hypothetical protein bcere0028_40310 [Bacillus cereus AH1271]
gi|228729341|gb|EEL80333.1| hypothetical protein bcere0028_40310 [Bacillus cereus AH1271]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|229019560|ref|ZP_04176376.1| hypothetical protein bcere0030_40630 [Bacillus cereus AH1273]
gi|229025801|ref|ZP_04182200.1| hypothetical protein bcere0029_40920 [Bacillus cereus AH1272]
gi|423389347|ref|ZP_17366573.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-3]
gi|423417740|ref|ZP_17394829.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-1]
gi|228735509|gb|EEL86105.1| hypothetical protein bcere0029_40920 [Bacillus cereus AH1272]
gi|228741726|gb|EEL91910.1| hypothetical protein bcere0030_40630 [Bacillus cereus AH1273]
gi|401106911|gb|EJQ14868.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-1]
gi|401641438|gb|EJS59155.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-3]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|423483918|ref|ZP_17460608.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-2]
gi|401141469|gb|EJQ49024.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-2]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|125623108|ref|YP_001031591.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
MG1363]
gi|124491916|emb|CAL96837.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 381
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++S + D+I TTS +PGTTL+
Sbjct: 182 DVYVVGVTNVGKSTLINAIIKS---ASGSEDVI---TTSRFPGTTLD 222
>gi|423612546|ref|ZP_17588407.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD107]
gi|401246135|gb|EJR52487.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD107]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|395238195|ref|ZP_10416133.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gigeriorum CRBIP
24.85]
gi|394477899|emb|CCI86110.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gigeriorum CRBIP
24.85]
Length = 369
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S D+Y VG TNVGKSTL NA + K D+ TTS +PGTTL+ ++
Sbjct: 164 SQDQDIYFVGMTNVGKSTLINAIID------KMGDIKDLITTSRFPGTTLDRIE 211
>gi|152976765|ref|YP_001376282.1| GTP-binding protein YqeH [Bacillus cytotoxicus NVH 391-98]
gi|152025517|gb|ABS23287.1| Nitric-oxide synthase [Bacillus cytotoxicus NVH 391-98]
Length = 368
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VGCTNVGKST N + K + + + TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINR-----MIKEFSEETENVITTSHFPGTTLDLI 205
>gi|387143202|ref|YP_005731595.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|418276913|ref|ZP_12891667.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21178]
gi|418955584|ref|ZP_13507521.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-189]
gi|269941085|emb|CBI49470.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|365173896|gb|EHM64325.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21178]
gi|375370670|gb|EHS74468.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-189]
Length = 366
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++S+ + DVY VG TNVGKSTL N +++ +
Sbjct: 130 GLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYTVGTTNVGKSTLINKLIEA---SVG 186
Query: 62 ASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 187 EKDVV---TTSRFPGTTLDMI 204
>gi|206969713|ref|ZP_03230667.1| GTPase family protein [Bacillus cereus AH1134]
gi|218233536|ref|YP_002369145.1| GTP-binding protein YqeH [Bacillus cereus B4264]
gi|228954622|ref|ZP_04116646.1| hypothetical protein bthur0006_39910 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228960605|ref|ZP_04122252.1| hypothetical protein bthur0005_40690 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048042|ref|ZP_04193617.1| hypothetical protein bcere0027_40160 [Bacillus cereus AH676]
gi|229071842|ref|ZP_04205055.1| hypothetical protein bcere0025_40110 [Bacillus cereus F65185]
gi|229081599|ref|ZP_04214095.1| hypothetical protein bcere0023_42300 [Bacillus cereus Rock4-2]
gi|229111809|ref|ZP_04241355.1| hypothetical protein bcere0018_40530 [Bacillus cereus Rock1-15]
gi|229129616|ref|ZP_04258584.1| hypothetical protein bcere0015_40580 [Bacillus cereus BDRD-Cer4]
gi|229146907|ref|ZP_04275271.1| hypothetical protein bcere0012_40460 [Bacillus cereus BDRD-ST24]
gi|229152539|ref|ZP_04280729.1| hypothetical protein bcere0011_40750 [Bacillus cereus m1550]
gi|229180613|ref|ZP_04307954.1| hypothetical protein bcere0005_39570 [Bacillus cereus 172560W]
gi|229192548|ref|ZP_04319509.1| hypothetical protein bcere0002_41990 [Bacillus cereus ATCC 10876]
gi|296504828|ref|YP_003666528.1| GTP-binding protein YqeH [Bacillus thuringiensis BMB171]
gi|365158875|ref|ZP_09355065.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411868|ref|ZP_17388988.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3O-2]
gi|423426469|ref|ZP_17403500.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-2]
gi|423432346|ref|ZP_17409350.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4O-1]
gi|423437781|ref|ZP_17414762.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X12-1]
gi|423502979|ref|ZP_17479571.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HD73]
gi|423585185|ref|ZP_17561272.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD045]
gi|423631058|ref|ZP_17606805.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD154]
gi|423640584|ref|ZP_17616202.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD166]
gi|423650200|ref|ZP_17625770.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD169]
gi|423657291|ref|ZP_17632590.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD200]
gi|449091299|ref|YP_007423740.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|206735401|gb|EDZ52569.1| GTPase family protein [Bacillus cereus AH1134]
gi|218161493|gb|ACK61485.1| GTPase family protein [Bacillus cereus B4264]
gi|228590855|gb|EEK48713.1| hypothetical protein bcere0002_41990 [Bacillus cereus ATCC 10876]
gi|228602856|gb|EEK60336.1| hypothetical protein bcere0005_39570 [Bacillus cereus 172560W]
gi|228630905|gb|EEK87544.1| hypothetical protein bcere0011_40750 [Bacillus cereus m1550]
gi|228636506|gb|EEK92972.1| hypothetical protein bcere0012_40460 [Bacillus cereus BDRD-ST24]
gi|228653733|gb|EEL09603.1| hypothetical protein bcere0015_40580 [Bacillus cereus BDRD-Cer4]
gi|228671565|gb|EEL26863.1| hypothetical protein bcere0018_40530 [Bacillus cereus Rock1-15]
gi|228701705|gb|EEL54195.1| hypothetical protein bcere0023_42300 [Bacillus cereus Rock4-2]
gi|228711272|gb|EEL63234.1| hypothetical protein bcere0025_40110 [Bacillus cereus F65185]
gi|228723286|gb|EEL74656.1| hypothetical protein bcere0027_40160 [Bacillus cereus AH676]
gi|228799084|gb|EEM46054.1| hypothetical protein bthur0005_40690 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228805068|gb|EEM51663.1| hypothetical protein bthur0006_39910 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|296325880|gb|ADH08808.1| GTP-binding protein YqeH [Bacillus thuringiensis BMB171]
gi|363626245|gb|EHL77242.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103936|gb|EJQ11913.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3O-2]
gi|401111216|gb|EJQ19115.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-2]
gi|401117102|gb|EJQ24940.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4O-1]
gi|401120936|gb|EJQ28732.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X12-1]
gi|401233828|gb|EJR40314.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD045]
gi|401264425|gb|EJR70537.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD154]
gi|401279645|gb|EJR85567.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD166]
gi|401282618|gb|EJR88517.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD169]
gi|401290034|gb|EJR95738.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD200]
gi|402459200|gb|EJV90937.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HD73]
gi|449025056|gb|AGE80219.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 368
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|24380165|ref|NP_722120.1| GTPase YqeH [Streptococcus mutans UA159]
gi|449866835|ref|ZP_21779649.1| GTP-binding protein YqeH [Streptococcus mutans U2B]
gi|449869935|ref|ZP_21780374.1| GTP-binding protein YqeH [Streptococcus mutans 8ID3]
gi|449987024|ref|ZP_21820328.1| GTP-binding protein YqeH [Streptococcus mutans NFSM2]
gi|450081504|ref|ZP_21851769.1| GTP-binding protein YqeH [Streptococcus mutans N66]
gi|24378167|gb|AAN59426.1|AE015007_13 putative GTP-binding protein [Streptococcus mutans UA159]
gi|449157405|gb|EMB60847.1| GTP-binding protein YqeH [Streptococcus mutans 8ID3]
gi|449176868|gb|EMB79194.1| GTP-binding protein YqeH [Streptococcus mutans NFSM2]
gi|449215208|gb|EMC15419.1| GTP-binding protein YqeH [Streptococcus mutans N66]
gi|449263590|gb|EMC60960.1| GTP-binding protein YqeH [Streptococcus mutans U2B]
Length = 368
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTLN
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLN 205
>gi|423395365|ref|ZP_17372566.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-1]
gi|423406240|ref|ZP_17383389.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-3]
gi|401654776|gb|EJS72315.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-1]
gi|401660234|gb|EJS77716.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-3]
Length = 368
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|320165317|gb|EFW42216.1| nitric-oxide synthase [Capsaspora owczarzaki ATCC 30864]
Length = 819
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
L DVY+VGC NVGKSTL N L ++ ++ TTS PGTT+ LL
Sbjct: 364 LRGGRDVYVVGCANVGKSTLVNNLLDKLRVLNESRSPVTSITTSGVPGTTIGLL 417
>gi|228910174|ref|ZP_04073993.1| hypothetical protein bthur0013_43220 [Bacillus thuringiensis IBL
200]
gi|228849457|gb|EEM94292.1| hypothetical protein bthur0013_43220 [Bacillus thuringiensis IBL
200]
Length = 318
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|6735297|emb|CAB68124.1| putative protein [Arabidopsis thaliana]
Length = 629
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NA + D K ++R T +P PGTTL +LK
Sbjct: 377 GNVWVIGAQNAGKSTLINALSKKDGAK------VTRLTEAPVPGTTLGILK 421
>gi|75761260|ref|ZP_00741242.1| GTP-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218899503|ref|YP_002447914.1| GTP-binding protein YqeH [Bacillus cereus G9842]
gi|228902861|ref|ZP_04067004.1| hypothetical protein bthur0014_40310 [Bacillus thuringiensis IBL
4222]
gi|228941502|ref|ZP_04104052.1| hypothetical protein bthur0008_41400 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228967402|ref|ZP_04128435.1| hypothetical protein bthur0004_42030 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228974432|ref|ZP_04135000.1| hypothetical protein bthur0003_41860 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981027|ref|ZP_04141329.1| hypothetical protein bthur0002_41890 [Bacillus thuringiensis Bt407]
gi|384188409|ref|YP_005574305.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564188|ref|YP_006606912.1| GTPase YqeH [Bacillus thuringiensis HD-771]
gi|410676724|ref|YP_006929095.1| GTP-binding protein [Bacillus thuringiensis Bt407]
gi|423358628|ref|ZP_17336131.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD022]
gi|423385837|ref|ZP_17363093.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-2]
gi|423527806|ref|ZP_17504251.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB1-1]
gi|423561196|ref|ZP_17537472.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A1]
gi|434377503|ref|YP_006612147.1| GTPase YqeH [Bacillus thuringiensis HD-789]
gi|452200801|ref|YP_007480882.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|74491242|gb|EAO54476.1| GTP-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218541005|gb|ACK93399.1| GTPase family protein [Bacillus cereus G9842]
gi|228778687|gb|EEM26952.1| hypothetical protein bthur0002_41890 [Bacillus thuringiensis Bt407]
gi|228785268|gb|EEM33279.1| hypothetical protein bthur0003_41860 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228792290|gb|EEM39859.1| hypothetical protein bthur0004_42030 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228818152|gb|EEM64227.1| hypothetical protein bthur0008_41400 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228856785|gb|EEN01302.1| hypothetical protein bthur0014_40310 [Bacillus thuringiensis IBL
4222]
gi|326942118|gb|AEA18014.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401084500|gb|EJP92746.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD022]
gi|401201453|gb|EJR08318.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A1]
gi|401635893|gb|EJS53648.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-2]
gi|401792840|gb|AFQ18879.1| GTPase YqeH [Bacillus thuringiensis HD-771]
gi|401876060|gb|AFQ28227.1| GTPase YqeH [Bacillus thuringiensis HD-789]
gi|402451469|gb|EJV83288.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB1-1]
gi|409175853|gb|AFV20158.1| GTP-binding protein [Bacillus thuringiensis Bt407]
gi|452106194|gb|AGG03134.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 368
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|377831709|ref|ZP_09814679.1| GTP-binding protein YqeH [Lactobacillus mucosae LM1]
gi|377554503|gb|EHT16212.1| GTP-binding protein YqeH [Lactobacillus mucosae LM1]
Length = 371
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ + DLI TTS +PGTTL+
Sbjct: 168 DVYVVGVTNVGKSTLINAIIKQ---QTGVQDLI---TTSRFPGTTLD 208
>gi|30022413|ref|NP_834044.1| GTP-binding protein YqeH [Bacillus cereus ATCC 14579]
gi|29897971|gb|AAP11245.1| GTP-binding protein [Bacillus cereus ATCC 14579]
Length = 358
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|229163284|ref|ZP_04291238.1| hypothetical protein bcere0009_40520 [Bacillus cereus R309803]
gi|228620191|gb|EEK77063.1| hypothetical protein bcere0009_40520 [Bacillus cereus R309803]
Length = 368
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|340354705|ref|ZP_08677406.1| GTP-binding protein [Sporosarcina newyorkensis 2681]
gi|339623104|gb|EGQ27610.1| GTP-binding protein [Sporosarcina newyorkensis 2681]
Length = 371
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ A+ + TTS +PGTTL++++
Sbjct: 166 DVYVVGCTNVGKSTFINRIIKD------ATGVQDVITTSYFPGTTLDVVE 209
>gi|222097780|ref|YP_002531837.1| GTP-binding protein yqeh [Bacillus cereus Q1]
gi|221241838|gb|ACM14548.1| GTP-binding protein [Bacillus cereus Q1]
Length = 347
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 141 DVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDLI 184
>gi|398311510|ref|ZP_10514984.1| GTPase YqeH [Bacillus mojavensis RO-H-1]
Length = 366
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ D I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEDNI--ITTSQFPGTTLDAIE 204
>gi|393200248|ref|YP_006462090.1| GTPase [Solibacillus silvestris StLB046]
gi|406667405|ref|ZP_11075163.1| hypothetical protein B857_02989 [Bacillus isronensis B3W22]
gi|327439579|dbj|BAK15944.1| predicted GTPase [Solibacillus silvestris StLB046]
gi|405384773|gb|EKB44214.1| hypothetical protein B857_02989 [Bacillus isronensis B3W22]
Length = 367
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 22 IVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+V A + DVY+VGCTNVGKST N ++ +A+ TTS +PGTTL++
Sbjct: 150 VVEAIEEYRNGKDVYVVGCTNVGKSTFINRIIK------QATGEGEIITTSHFPGTTLDM 203
Query: 82 L 82
+
Sbjct: 204 I 204
>gi|254736440|ref|ZP_05194146.1| GTP-binding protein YqeH [Bacillus anthracis str. Western North
America USA6153]
Length = 364
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Query: 25 ADLVLSSAG--DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNL 81
AD + G DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L
Sbjct: 151 ADAIEYYRGGKDVYVVGCTNVGKSTFINRMIK------EFSDETENVITTSHFPGTTLDL 204
Query: 82 L 82
+
Sbjct: 205 I 205
>gi|229086906|ref|ZP_04219065.1| hypothetical protein bcere0022_34800 [Bacillus cereus Rock3-44]
gi|228696416|gb|EEL49242.1| hypothetical protein bcere0022_34800 [Bacillus cereus Rock3-44]
Length = 368
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VGCTNVGKST N + K + + + TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINR-----MIKEFSEETENVITTSHFPGTTLDLI 205
>gi|239637592|ref|ZP_04678564.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri L37603]
gi|239596810|gb|EEQ79335.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri L37603]
Length = 366
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 6 ALEGREVILVARPEPNIVSADLVLS-----SAGDVYLVGCTNVGKSTLFNAFLQSDLCKI 60
LE +V+L++ + + DL+ S DVY+VG TNVGKSTL N ++ +
Sbjct: 130 GLEAEDVVLISAEKGQGIE-DLLDSINKYRDQEDVYIVGTTNVGKSTLINKLIE---LSV 185
Query: 61 KASDLISRATTSPWPGTTLNLL 82
D++ TTS +PGTTL+++
Sbjct: 186 GEKDVV---TTSRFPGTTLDMI 204
>gi|357238329|ref|ZP_09125666.1| ribosome biogenesis GTPase YqeH [Streptococcus ictaluri 707-05]
gi|356753052|gb|EHI70173.1| ribosome biogenesis GTPase YqeH [Streptococcus ictaluri 707-05]
Length = 372
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 8/53 (15%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I + DLI TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIQ----EITGNKDLI---TTSRFPGTTLD 205
>gi|343525560|ref|ZP_08762515.1| ferrous iron transport protein B-like protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
gi|343395830|gb|EGV08368.1| ferrous iron transport protein B-like protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
Length = 197
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 41 DVYVVGVTNVGKSTLINAIIQEITGD---KDII---TTSRFPGTTLD 81
>gi|257087775|ref|ZP_05582136.1| nitric-oxide synthase [Enterococcus faecalis D6]
gi|256995805|gb|EEU83107.1| nitric-oxide synthase [Enterococcus faecalis D6]
Length = 375
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 212
>gi|449674982|ref|XP_002162076.2| PREDICTED: nitric oxide-associated protein 1-like [Hydra
magnipapillata]
Length = 666
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCK 93
D+YLVGCTNVGKS+L+N LQ+ L + L +A P TT++LL+ I ++ + +
Sbjct: 258 DIYLVGCTNVGKSSLYN-LLQNMLNVHMSKRLPPQAIVHYTPVTTVSLLRSDISMRRLWR 316
Query: 94 VKELGKK 100
+++ KK
Sbjct: 317 LQDRLKK 323
>gi|256616683|ref|ZP_05473529.1| nitric-oxide synthase [Enterococcus faecalis ATCC 4200]
gi|256596210|gb|EEU15386.1| nitric-oxide synthase [Enterococcus faecalis ATCC 4200]
Length = 375
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 212
>gi|169350470|ref|ZP_02867408.1| hypothetical protein CLOSPI_01238 [Clostridium spiroforme DSM 1552]
gi|169292790|gb|EDS74923.1| ribosome biogenesis GTPase YqeH [Clostridium spiroforme DSM 1552]
Length = 365
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKS+L NA L+ ++LI TTS +PGTTL+L++
Sbjct: 162 DVYIVGVTNVGKSSLINALLKH--YGTGDNNLI---TTSEFPGTTLDLIE 206
>gi|295425298|ref|ZP_06818001.1| ribosome biogenesis GTPase YqeH [Lactobacillus amylolyticus DSM
11664]
gi|295065074|gb|EFG55979.1| ribosome biogenesis GTPase YqeH [Lactobacillus amylolyticus DSM
11664]
Length = 369
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S D+Y VG TNVGKSTL NA + K D+ TTS +PGTTL+ ++
Sbjct: 164 SQDRDIYFVGMTNVGKSTLINAIID------KMGDIKDVITTSRFPGTTLDRIE 211
>gi|256763435|ref|ZP_05504015.1| nitric-oxide synthase [Enterococcus faecalis T3]
gi|256684686|gb|EEU24381.1| nitric-oxide synthase [Enterococcus faecalis T3]
Length = 375
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 212
>gi|255971788|ref|ZP_05422374.1| nitric-oxide synthase [Enterococcus faecalis T1]
gi|255974786|ref|ZP_05425372.1| nitric-oxide synthase [Enterococcus faecalis T2]
gi|256958094|ref|ZP_05562265.1| nitric-oxide synthase [Enterococcus faecalis DS5]
gi|256960940|ref|ZP_05565111.1| nitric-oxide synthase [Enterococcus faecalis Merz96]
gi|256963921|ref|ZP_05568092.1| nitric-oxide synthase [Enterococcus faecalis HIP11704]
gi|257079982|ref|ZP_05574343.1| nitric-oxide synthase [Enterococcus faecalis JH1]
gi|257081574|ref|ZP_05575935.1| nitric-oxide synthase [Enterococcus faecalis E1Sol]
gi|257084223|ref|ZP_05578584.1| nitric-oxide synthase [Enterococcus faecalis Fly1]
gi|257091097|ref|ZP_05585458.1| nitric-oxide synthase [Enterococcus faecalis CH188]
gi|257417044|ref|ZP_05594038.1| nitric-oxide synthase [Enterococcus faecalis ARO1/DG]
gi|257420198|ref|ZP_05597192.1| nitric-oxide synthase [Enterococcus faecalis T11]
gi|255962806|gb|EET95282.1| nitric-oxide synthase [Enterococcus faecalis T1]
gi|255967658|gb|EET98280.1| nitric-oxide synthase [Enterococcus faecalis T2]
gi|256948590|gb|EEU65222.1| nitric-oxide synthase [Enterococcus faecalis DS5]
gi|256951436|gb|EEU68068.1| nitric-oxide synthase [Enterococcus faecalis Merz96]
gi|256954417|gb|EEU71049.1| nitric-oxide synthase [Enterococcus faecalis HIP11704]
gi|256988012|gb|EEU75314.1| nitric-oxide synthase [Enterococcus faecalis JH1]
gi|256989604|gb|EEU76906.1| nitric-oxide synthase [Enterococcus faecalis E1Sol]
gi|256992253|gb|EEU79555.1| nitric-oxide synthase [Enterococcus faecalis Fly1]
gi|256999909|gb|EEU86429.1| nitric-oxide synthase [Enterococcus faecalis CH188]
gi|257158872|gb|EEU88832.1| nitric-oxide synthase [Enterococcus faecalis ARO1/DG]
gi|257162026|gb|EEU91986.1| nitric-oxide synthase [Enterococcus faecalis T11]
Length = 375
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 212
>gi|228993078|ref|ZP_04153001.1| hypothetical protein bpmyx0001_38150 [Bacillus pseudomycoides DSM
12442]
gi|228999128|ref|ZP_04158710.1| hypothetical protein bmyco0003_36850 [Bacillus mycoides Rock3-17]
gi|229006676|ref|ZP_04164310.1| hypothetical protein bmyco0002_35780 [Bacillus mycoides Rock1-4]
gi|228754537|gb|EEM03948.1| hypothetical protein bmyco0002_35780 [Bacillus mycoides Rock1-4]
gi|228760745|gb|EEM09709.1| hypothetical protein bmyco0003_36850 [Bacillus mycoides Rock3-17]
gi|228766726|gb|EEM15366.1| hypothetical protein bpmyx0001_38150 [Bacillus pseudomycoides DSM
12442]
Length = 368
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VGCTNVGKST N + K + + + TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINR-----MIKEFSEETENVITTSHFPGTTLDLI 205
>gi|309807137|ref|ZP_07701114.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV
03V1-b]
gi|308166488|gb|EFO68690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV
03V1-b]
Length = 370
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y VG TNVGKSTL NA +++ S+ + TTS +PGTTL+ +K
Sbjct: 169 DIYFVGTTNVGKSTLINAIIET------RSEYKNLITTSKFPGTTLDSIK 212
>gi|407718715|ref|YP_006796120.1| GTPase YqeH [Leuconostoc carnosum JB16]
gi|407242471|gb|AFT82121.1| GTPase YqeH [Leuconostoc carnosum JB16]
Length = 381
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++S + DLI TTS +PGTTL+
Sbjct: 180 DVYVVGVTNVGKSTLINQIIKS---RTGIQDLI---TTSRFPGTTLD 220
>gi|422719674|ref|ZP_16776305.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0017]
gi|315033123|gb|EFT45055.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0017]
Length = 369
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|56808383|ref|ZP_00366137.1| COG1161: Predicted GTPases [Streptococcus pyogenes M49 591]
Length = 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 2 LRNGRDVYVVGVTNVGKSTLINAIIQEITGN---KDVI---TTSRFPGTTLD 47
>gi|94993651|ref|YP_601749.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS10750]
gi|94547159|gb|ABF37205.1| GTP-binding protein [Streptococcus pyogenes MGAS10750]
Length = 372
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|94987891|ref|YP_595992.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS9429]
gi|94541399|gb|ABF31448.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
Length = 372
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q +I + D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQ----EITGNKDVI---TTSRFPGTTLD 205
>gi|408401050|ref|YP_006859013.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|407967278|dbj|BAM60516.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 372
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q +I + D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQ----EITGNKDVI---TTSRFPGTTLD 205
>gi|373859118|ref|ZP_09601850.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 1NLA3E]
gi|372451209|gb|EHP24688.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 1NLA3E]
Length = 367
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL++++
Sbjct: 162 DVYVVGCTNVGKSTFINRVIKE---FSGGEDVI---TTSHFPGTTLDIIE 205
>gi|422738398|ref|ZP_16793595.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2141]
gi|315145751|gb|EFT89767.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2141]
Length = 369
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|309810198|ref|ZP_07704043.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN
2503V10-D]
gi|312872993|ref|ZP_07733053.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1]
gi|312874210|ref|ZP_07734244.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d]
gi|312875587|ref|ZP_07735588.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b]
gi|325912587|ref|ZP_08174970.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B]
gi|308169470|gb|EFO71518.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN
2503V10-D]
gi|311088841|gb|EFQ47284.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b]
gi|311090280|gb|EFQ48690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d]
gi|311091515|gb|EFQ49899.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1]
gi|325478008|gb|EGC81137.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B]
Length = 370
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y VG TNVGKSTL NA +++ S+ + TTS +PGTTL+ +K
Sbjct: 169 DIYFVGTTNVGKSTLINAIIET------RSEYKNLITTSKFPGTTLDSIK 212
>gi|94991776|ref|YP_599875.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS2096]
gi|417857511|ref|ZP_12502570.1| GTPase YqeH [Streptococcus pyogenes HKU QMH11M0907901]
gi|94545284|gb|ABF35331.1| GTP-binding protein [Streptococcus pyogenes MGAS2096]
gi|387934466|gb|EIK42579.1| GTPase YqeH [Streptococcus pyogenes HKU QMH11M0907901]
Length = 372
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q +I + D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQ----EITGNKDVI---TTSRFPGTTLD 205
>gi|422844094|ref|ZP_16890804.1| GTP-binding protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325685794|gb|EGD27867.1| GTP-binding protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 378
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
S DVY VG TNVGKSTL NA + + D+ TTS +PGTTL+ + EI
Sbjct: 173 SQDQDVYFVGTTNVGKSTLINAIID------EMGDVQDLITTSRFPGTTLDQI-EIPLDN 225
Query: 90 TVCKVKELG---KKILLSQVKGKNMS-KTEKKPLQP 121
V G K L S++ K++ + KKPL+P
Sbjct: 226 GHFLVDTPGILTDKQLASRLDPKDLDLASPKKPLKP 261
>gi|312871750|ref|ZP_07731838.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a]
gi|329920071|ref|ZP_08276902.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G]
gi|311092692|gb|EFQ51048.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a]
gi|328936525|gb|EGG32969.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G]
Length = 370
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y VG TNVGKSTL NA +++ S+ + TTS +PGTTL+ +K
Sbjct: 169 DIYFVGTTNVGKSTLINAIIET------RSEYKNLITTSKFPGTTLDSIK 212
>gi|50913635|ref|YP_059607.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS10394]
gi|50902709|gb|AAT86424.1| GTP-binding protein [Streptococcus pyogenes MGAS10394]
gi|94543275|gb|ABF33323.1| GTP-binding protein [Streptococcus pyogenes MGAS10270]
Length = 372
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQEITGN---KDVI---TTSRFPGTTLD 205
>gi|19745428|ref|NP_606564.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS8232]
gi|71902919|ref|YP_279722.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS6180]
gi|139474400|ref|YP_001129116.1| GTP-binding protein YqeH [Streptococcus pyogenes str. Manfredo]
gi|306827997|ref|ZP_07461264.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes ATCC 10782]
gi|386316307|ref|YP_006012471.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|417752128|ref|ZP_12400359.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|19747540|gb|AAL97063.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|71802014|gb|AAX71367.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
gi|134272647|emb|CAM30914.1| GTP-binding protein [Streptococcus pyogenes str. Manfredo]
gi|304429916|gb|EFM32958.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes ATCC 10782]
gi|323126594|gb|ADX23891.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333772086|gb|EGL48968.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 372
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|418035789|ref|ZP_12674231.1| hypothetical protein LDBUL1519_00931 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354689355|gb|EHE89353.1| hypothetical protein LDBUL1519_00931 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 378
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
S DVY VG TNVGKSTL NA + + D+ TTS +PGTTL+ + EI
Sbjct: 173 SQDQDVYFVGTTNVGKSTLINAIID------EMGDVQDLITTSRFPGTTLDQI-EIPLDN 225
Query: 90 TVCKVKELG---KKILLSQVKGKNMS-KTEKKPLQP 121
V G K L S++ K++ + KKPL+P
Sbjct: 226 GHFLVDTPGILTDKQLASRLDPKDLDLASPKKPLKP 261
>gi|259500527|ref|ZP_05743429.1| GTP-binding protein [Lactobacillus iners DSM 13335]
gi|302191217|ref|ZP_07267471.1| GTP-binding protein YqeH [Lactobacillus iners AB-1]
gi|325912153|ref|ZP_08174551.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D]
gi|259167911|gb|EEW52406.1| GTP-binding protein [Lactobacillus iners DSM 13335]
gi|325476103|gb|EGC79271.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D]
Length = 370
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y VG TNVGKSTL NA +++ S+ + TTS +PGTTL+ +K
Sbjct: 169 DIYFVGTTNVGKSTLINAIIET------RSEYKNLITTSKFPGTTLDSIK 212
>gi|385816103|ref|YP_005852494.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|418028692|ref|ZP_12667246.1| hypothetical protein LDBUL1632_00040 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|325126140|gb|ADY85470.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|354691530|gb|EHE91451.1| hypothetical protein LDBUL1632_00040 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 378
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
S DVY VG TNVGKSTL NA + + D+ TTS +PGTTL+ + EI
Sbjct: 173 SQDQDVYFVGTTNVGKSTLINAIID------EMGDVQDLITTSRFPGTTLDQI-EIPLDN 225
Query: 90 TVCKVKELG---KKILLSQVKGKNMS-KTEKKPLQP 121
V G K L S++ K++ + KKPL+P
Sbjct: 226 GHFLVDTPGILTDKQLASRLDPKDLDLASPKKPLKP 261
>gi|15674473|ref|NP_268647.1| GTP-binding protein YqeH [Streptococcus pyogenes SF370]
gi|21909760|ref|NP_664028.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS315]
gi|28896548|ref|NP_802898.1| GTP-binding protein YqeH [Streptococcus pyogenes SSI-1]
gi|71910075|ref|YP_281625.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS5005]
gi|386362126|ref|YP_006071457.1| hypothetical protein SPYALAB49_000294 [Streptococcus pyogenes
Alab49]
gi|410679949|ref|YP_006932351.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes A20]
gi|421891703|ref|ZP_16322471.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus pyogenes NS88.2]
gi|13621572|gb|AAK33368.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|21903945|gb|AAM78831.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
gi|28811802|dbj|BAC64731.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|71852857|gb|AAZ50880.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
gi|350276535|gb|AEQ23903.1| hypothetical protein SPYALAB49_000294 [Streptococcus pyogenes
Alab49]
gi|379982527|emb|CCG26193.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus pyogenes NS88.2]
gi|395453320|dbj|BAM29659.1| GTP-binding protein [Streptococcus pyogenes M1 476]
gi|409692538|gb|AFV37398.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes A20]
Length = 372
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q +I + D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQ----EITGNKDVI---TTSRFPGTTLD 205
>gi|414160964|ref|ZP_11417227.1| ribosome biogenesis GTPase YqeH [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876643|gb|EKS24541.1| ribosome biogenesis GTPase YqeH [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 365
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 6 ALEGREVILVARPE----PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIK 61
LE +V+L++ + +++ A DVY+VG TNVGKSTL N ++ + +
Sbjct: 129 GLEAEDVVLISAEKGYGIQDLLEAIQQHRKQEDVYIVGTTNVGKSTLINKLIEQSVGEKN 188
Query: 62 ASDLISRATTSPWPGTTLNLL 82
TTS +PGTTL+L+
Sbjct: 189 V------VTTSRFPGTTLDLI 203
>gi|422702221|ref|ZP_16760059.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1302]
gi|315166303|gb|EFU10320.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1302]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|104774345|ref|YP_619325.1| GTP-binding protein YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514440|ref|YP_813346.1| GTP-binding protein YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423426|emb|CAI98299.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|116093755|gb|ABJ58908.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
S DVY VG TNVGKSTL NA + + D+ TTS +PGTTL+ + EI
Sbjct: 164 SQDQDVYFVGTTNVGKSTLINAIID------EMGDVQDLITTSRFPGTTLDQI-EIPLDN 216
Query: 90 TVCKVKELG---KKILLSQVKGKNMS-KTEKKPLQP 121
V G K L S++ K++ + KKPL+P
Sbjct: 217 GHFLVDTPGILTDKQLASRLDPKDLDLASPKKPLKP 252
>gi|29377339|ref|NP_816493.1| GTP-binding protein YqeH [Enterococcus faecalis V583]
gi|227554296|ref|ZP_03984343.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|422712679|ref|ZP_16769442.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309A]
gi|422716477|ref|ZP_16773181.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309B]
gi|29344806|gb|AAO82563.1| GTPase of unknown function [Enterococcus faecalis V583]
gi|227176586|gb|EEI57558.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|315575232|gb|EFU87423.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309B]
gi|315582408|gb|EFU94599.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309A]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|349611531|ref|ZP_08890766.1| ribosome biogenesis GTPase YqeH [Lactobacillus sp. 7_1_47FAA]
gi|348608624|gb|EGY58604.1| ribosome biogenesis GTPase YqeH [Lactobacillus sp. 7_1_47FAA]
Length = 370
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y VG TNVGKSTL NA +++ S+ + TTS +PGTTL+ +K
Sbjct: 169 DIYFVGTTNVGKSTLINAIIET------RSEYKNLITTSKFPGTTLDSIK 212
>gi|251781782|ref|YP_002996084.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390411|dbj|BAH80870.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 372
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|209558820|ref|YP_002285292.1| GTP-binding protein YqeH [Streptococcus pyogenes NZ131]
gi|209540021|gb|ACI60597.1| GTP-binding protein [Streptococcus pyogenes NZ131]
Length = 373
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q +I + D+I TTS +PGTTL+
Sbjct: 161 LRNGRDVYVVGVTNVGKSTLINAIIQ----EITGNKDVI---TTSRFPGTTLD 206
>gi|315653638|ref|ZP_07906558.1| GTP-binding protein [Lactobacillus iners ATCC 55195]
gi|315489000|gb|EFU78642.1| GTP-binding protein [Lactobacillus iners ATCC 55195]
Length = 370
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+Y VG TNVGKSTL NA +++ S+ + TTS +PGTTL+ +K
Sbjct: 169 DIYFVGTTNVGKSTLINAIIET------RSEYKNLITTSKFPGTTLDSIK 212
>gi|313124180|ref|YP_004034439.1| ribosome biogenesis GTPase yqeh [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280743|gb|ADQ61462.1| Ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
S DVY VG TNVGKSTL NA + + D+ TTS +PGTTL+ + EI
Sbjct: 164 SQDQDVYFVGTTNVGKSTLINAIID------EMGDVQDLITTSRFPGTTLDQI-EIPLDN 216
Query: 90 TVCKVKELG---KKILLSQVKGKNMS-KTEKKPLQP 121
V G K L S++ K++ + KKPL+P
Sbjct: 217 GHFLVDTPGILTDKQLASRLDPKDLDLASPKKPLKP 252
>gi|383479447|ref|YP_005388341.1| GTP-binding protein [Streptococcus pyogenes MGAS15252]
gi|383493371|ref|YP_005411047.1| GTP-binding protein [Streptococcus pyogenes MGAS1882]
gi|378927437|gb|AFC65643.1| GTP-binding protein [Streptococcus pyogenes MGAS15252]
gi|378929099|gb|AFC67516.1| GTP-binding protein [Streptococcus pyogenes MGAS1882]
Length = 372
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQEITGN---KDVI---TTSRFPGTTLD 205
>gi|422723394|ref|ZP_16779930.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2137]
gi|424671902|ref|ZP_18108889.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis 599]
gi|315026558|gb|EFT38490.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2137]
gi|402357870|gb|EJU92567.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis 599]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|227519403|ref|ZP_03949452.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|424678029|ref|ZP_18114874.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV103]
gi|424679267|ref|ZP_18116094.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV116]
gi|424682894|ref|ZP_18119652.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV129]
gi|424686799|ref|ZP_18123464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV25]
gi|424692181|ref|ZP_18128694.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV31]
gi|424692416|ref|ZP_18128905.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV37]
gi|424696110|ref|ZP_18132475.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV41]
gi|424699535|ref|ZP_18135748.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV62]
gi|424704721|ref|ZP_18140815.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV63]
gi|424706899|ref|ZP_18142894.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV65]
gi|424717576|ref|ZP_18146858.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV68]
gi|424720418|ref|ZP_18149521.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV72]
gi|424726104|ref|ZP_18154788.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV73]
gi|424734049|ref|ZP_18162599.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV81]
gi|424738078|ref|ZP_18166523.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV85]
gi|424755413|ref|ZP_18183290.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV93]
gi|227073157|gb|EEI11120.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|402352576|gb|EJU87421.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV103]
gi|402357395|gb|EJU92105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV116]
gi|402360424|gb|EJU95024.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV31]
gi|402366220|gb|EJV00614.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV129]
gi|402366736|gb|EJV01097.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV25]
gi|402375829|gb|EJV09800.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV62]
gi|402378146|gb|EJV12025.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV37]
gi|402378563|gb|EJV12405.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV41]
gi|402381158|gb|EJV14871.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV63]
gi|402384280|gb|EJV17839.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV68]
gi|402386585|gb|EJV20090.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV65]
gi|402389753|gb|EJV23138.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV73]
gi|402390667|gb|EJV23996.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV81]
gi|402393490|gb|EJV26714.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV72]
gi|402400961|gb|EJV33765.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV93]
gi|402403484|gb|EJV36151.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV85]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|422699648|ref|ZP_16757511.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1342]
gi|315171886|gb|EFU15903.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1342]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|323339581|ref|ZP_08079855.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|347525535|ref|YP_004832283.1| GTP-binding protein YqeH [Lactobacillus ruminis ATCC 27782]
gi|417973879|ref|ZP_12614713.1| GTPase YqeH [Lactobacillus ruminis ATCC 25644]
gi|323092976|gb|EFZ35574.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|345284494|gb|AEN78347.1| GTP-binding protein YqeH [Lactobacillus ruminis ATCC 27782]
gi|346329750|gb|EGX98035.1| GTPase YqeH [Lactobacillus ruminis ATCC 25644]
Length = 372
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++ + SDLI TTS +PGTTL+ ++
Sbjct: 169 DVYVVGVTNVGKSTLINQIIKH---QTGISDLI---TTSRFPGTTLDRIE 212
>gi|422727775|ref|ZP_16784205.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0012]
gi|315151732|gb|EFT95748.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0012]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|307286839|ref|ZP_07566921.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0109]
gi|306502054|gb|EFM71340.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0109]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|295113743|emb|CBL32380.1| ribosome biogenesis GTPase YqeH [Enterococcus sp. 7L76]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|229549019|ref|ZP_04437744.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|257421576|ref|ZP_05598566.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|293382471|ref|ZP_06628406.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R712]
gi|293387145|ref|ZP_06631706.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis S613]
gi|294779514|ref|ZP_06744909.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis PC1.1]
gi|300860377|ref|ZP_07106464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TUSoD Ef11]
gi|307268318|ref|ZP_07549699.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4248]
gi|307272112|ref|ZP_07553375.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0855]
gi|307276172|ref|ZP_07557303.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2134]
gi|307280576|ref|ZP_07561624.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0860]
gi|307289801|ref|ZP_07569737.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0411]
gi|312901412|ref|ZP_07760689.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0470]
gi|312904375|ref|ZP_07763536.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0635]
gi|312906526|ref|ZP_07765528.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 512]
gi|312910471|ref|ZP_07769317.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 516]
gi|312951126|ref|ZP_07770031.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0102]
gi|384514140|ref|YP_005709233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis OG1RF]
gi|384519605|ref|YP_005706910.1| GTPase [Enterococcus faecalis 62]
gi|397701049|ref|YP_006538837.1| GTPase [Enterococcus faecalis D32]
gi|421512806|ref|ZP_15959601.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecalis ATCC 29212]
gi|422690220|ref|ZP_16748278.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0630]
gi|422691066|ref|ZP_16749105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0031]
gi|422693689|ref|ZP_16751697.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4244]
gi|422697540|ref|ZP_16755476.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1346]
gi|422706087|ref|ZP_16763792.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0043]
gi|422709128|ref|ZP_16766641.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0027]
gi|422726077|ref|ZP_16782532.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0312]
gi|422731150|ref|ZP_16787525.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0645]
gi|422734052|ref|ZP_16790349.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1341]
gi|424757360|ref|ZP_18185109.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R508]
gi|428767963|ref|YP_007154074.1| GTP-binding protein YqeH [Enterococcus faecalis str. Symbioflor 1]
gi|430359132|ref|ZP_19425748.1| nitric-oxide synthase [Enterococcus faecalis OG1X]
gi|430370883|ref|ZP_19429290.1| nitric-oxide synthase [Enterococcus faecalis M7]
gi|229305812|gb|EEN71808.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|257163400|gb|EEU93360.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|291080155|gb|EFE17519.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R712]
gi|291083416|gb|EFE20379.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis S613]
gi|294453393|gb|EFG21800.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis PC1.1]
gi|300849416|gb|EFK77166.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TUSoD Ef11]
gi|306499135|gb|EFM68614.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0411]
gi|306503942|gb|EFM73159.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0860]
gi|306507166|gb|EFM76305.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2134]
gi|306511228|gb|EFM80235.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0855]
gi|306515344|gb|EFM83878.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4248]
gi|310627469|gb|EFQ10752.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 512]
gi|310630902|gb|EFQ14185.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0102]
gi|310632274|gb|EFQ15557.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0635]
gi|311289243|gb|EFQ67799.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 516]
gi|311291488|gb|EFQ70044.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0470]
gi|315036287|gb|EFT48219.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0027]
gi|315148844|gb|EFT92860.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4244]
gi|315154134|gb|EFT98150.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0031]
gi|315156471|gb|EFU00488.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0043]
gi|315159003|gb|EFU03020.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0312]
gi|315162818|gb|EFU06835.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0645]
gi|315169160|gb|EFU13177.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1341]
gi|315173920|gb|EFU17937.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1346]
gi|315576864|gb|EFU89055.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0630]
gi|323481738|gb|ADX81177.1| GTPase of unknown function family protein [Enterococcus faecalis
62]
gi|327536029|gb|AEA94863.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis OG1RF]
gi|397337688|gb|AFO45360.1| GTPase of unknown function family protein [Enterococcus faecalis
D32]
gi|401674071|gb|EJS80434.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecalis ATCC 29212]
gi|402407202|gb|EJV39737.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R508]
gi|427186136|emb|CCO73360.1| GTP-binding protein YqeH [Enterococcus faecalis str. Symbioflor 1]
gi|429513487|gb|ELA03068.1| nitric-oxide synthase [Enterococcus faecalis OG1X]
gi|429515248|gb|ELA04766.1| nitric-oxide synthase [Enterococcus faecalis M7]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|225871191|ref|YP_002747138.1| GTP-binding protein YqeH [Streptococcus equi subsp. equi 4047]
gi|225700595|emb|CAW95118.1| GTP-binding protein [Streptococcus equi subsp. equi 4047]
Length = 372
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|422758292|ref|ZP_16812054.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411127|gb|EFY02035.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 372
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|300813180|ref|ZP_07093554.1| ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300495838|gb|EFK30986.1| ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
S DVY VG TNVGKSTL NA + + D+ TTS +PGTTL+ + EI
Sbjct: 164 SQDQDVYFVGTTNVGKSTLINAIID------EMGDVQDLITTSRFPGTTLDQI-EIPLDN 216
Query: 90 TVCKVKELG---KKILLSQVKGKNMS-KTEKKPLQP 121
V G K L S++ K++ + KKPL+P
Sbjct: 217 GHFLVDTPGILTDKQLASRLDPKDLDLASPKKPLKP 252
>gi|225867895|ref|YP_002743843.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
gi|225701171|emb|CAW98072.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
Length = 372
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|422867666|ref|ZP_16914236.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1467]
gi|329577181|gb|EGG58651.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1467]
Length = 375
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLVNQIIQQ---TVGVQDVI---TTSQFPGTTLD 212
>gi|281203403|gb|EFA77603.1| hypothetical protein PPL_12209 [Polysphondylium pallidum PN500]
Length = 565
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 19/73 (26%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASD-------------------LISRA 69
L DV++VGC+NVGKST NA + K+ ++ + RA
Sbjct: 350 LRRGRDVFVVGCSNVGKSTFLNALVDEYREKVIFNENEQGNSGSSNNNNNQAKPSALERA 409
Query: 70 TTSPWPGTTLNLL 82
TTS +PGTTLN++
Sbjct: 410 TTSIFPGTTLNII 422
>gi|302035744|ref|YP_003796066.1| tRNA modification GTPase [Candidatus Nitrospira defluvii]
gi|300603808|emb|CBK40140.1| tRNA modification GTPase [Candidatus Nitrospira defluvii]
Length = 476
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 11/57 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
V ++G NVGKS+L NA L+SD RA +P PGTT +LL+E++ I +
Sbjct: 240 VAILGRPNVGKSSLMNALLRSD-----------RAIVTPIPGTTRDLLEEVVNIHGI 285
>gi|229544804|ref|ZP_04433529.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|256854161|ref|ZP_05559526.1| GTP-binding protein YqeH [Enterococcus faecalis T8]
gi|422684471|ref|ZP_16742707.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4000]
gi|229310076|gb|EEN76063.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|256711104|gb|EEU26147.1| GTP-binding protein YqeH [Enterococcus faecalis T8]
gi|315030785|gb|EFT42717.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4000]
Length = 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q + D+I TTS +PGTTL+
Sbjct: 166 DVYVVGVTNVGKSTLINQIIQQ---TVGVQDVI---TTSQFPGTTLD 206
>gi|414564751|ref|YP_006043712.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847816|gb|AEJ26028.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 372
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|291000866|ref|XP_002683000.1| GTP-binding protein [Naegleria gruberi]
gi|284096628|gb|EFC50256.1| GTP-binding protein [Naegleria gruberi]
Length = 677
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQT 90
GDVY++GCTNVGKST N + K++ I TTS PGTTL + I T
Sbjct: 417 GGDVYVIGCTNVGKSTFINQLFKQQYESRKSNISI---TTSTLPGTTLKTISFPITTAT 472
>gi|70726319|ref|YP_253233.1| GTP-binding protein YqeH [Staphylococcus haemolyticus JCSC1435]
gi|68447043|dbj|BAE04627.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 366
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+L+
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDVV---TTSRFPGTTLDLI 204
>gi|138896098|ref|YP_001126551.1| GTP-binding protein YqeH [Geobacillus thermodenitrificans NG80-2]
gi|134267611|gb|ABO67806.1| GTPase family protein [Geobacillus thermodenitrificans NG80-2]
Length = 371
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ +A+ + TTS +PGTTL++++
Sbjct: 166 DVYVVGCTNVGKSTFINRIIK------EATGKGNVITTSYFPGTTLDMIE 209
>gi|335996450|ref|ZP_08562367.1| GTP-binding protein [Lactobacillus ruminis SPM0211]
gi|335351520|gb|EGM53011.1| GTP-binding protein [Lactobacillus ruminis SPM0211]
Length = 372
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++ + SDLI TTS +PGTTL+ ++
Sbjct: 169 DVYVVGVTNVGKSTLINQIIKH---QTGISDLI---TTSRFPGTTLDRIE 212
>gi|240104509|pdb|3H2Y|A Chain A, Crystal Structure Of Yqeh Gtpase From Bacillus Anthracis
With Dgdp Bound
Length = 368
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA-TTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + SD TTS +PGTTL+L+
Sbjct: 162 DVYVVGCTNVGKSTFINRXIK------EFSDETENVITTSHFPGTTLDLI 205
>gi|418621384|ref|ZP_13184160.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU123]
gi|419769637|ref|ZP_14295731.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-250]
gi|374829328|gb|EHR93132.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU123]
gi|383358256|gb|EID35717.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-250]
Length = 288
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + + D++ TTS +PGTTL+++
Sbjct: 84 DVYIVGTTNVGKSTLINKLIEQSVGE---KDVV---TTSRFPGTTLDMI 126
>gi|297820508|ref|XP_002878137.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323975|gb|EFH54396.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NA + D K ++R T +P PGTTL +L+
Sbjct: 377 GNVWVIGAQNAGKSTLINALSKKDGAK------VTRLTEAPVPGTTLGILR 421
>gi|196248991|ref|ZP_03147691.1| Nitric-oxide synthase [Geobacillus sp. G11MC16]
gi|196211867|gb|EDY06626.1| Nitric-oxide synthase [Geobacillus sp. G11MC16]
Length = 369
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ +A+ + TTS +PGTTL++++
Sbjct: 164 DVYVVGCTNVGKSTFINRIIK------EATGKGNVITTSYFPGTTLDMIE 207
>gi|315038850|ref|YP_004032418.1| GTP-binding protein YqeH [Lactobacillus amylovorus GRL 1112]
gi|325957288|ref|YP_004292700.1| GTPase YqeH [Lactobacillus acidophilus 30SC]
gi|385818080|ref|YP_005854470.1| GTPase YqeH [Lactobacillus amylovorus GRL1118]
gi|312276983|gb|ADQ59623.1| GTP-binding protein YqeH [Lactobacillus amylovorus GRL 1112]
gi|325333853|gb|ADZ07761.1| GTPase YqeH [Lactobacillus acidophilus 30SC]
gi|327184018|gb|AEA32465.1| GTPase YqeH [Lactobacillus amylovorus GRL1118]
Length = 369
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 14/87 (16%)
Query: 1 MELWPALEGREVILV-ARPEPNIVSADLVL---SSAGDVYLVGCTNVGKSTLFNAFLQSD 56
M L+P +E+ LV A+ + N+ S + S DVY VG TNVGKSTL NA +
Sbjct: 135 MGLYP----KEIFLVSAKRKVNLESLIAYINKQSQDKDVYFVGTTNVGKSTLINAIIDM- 189
Query: 57 LCKIKASDLISRATTSPWPGTTLNLLK 83
D+ + TTS +PGTTL+ ++
Sbjct: 190 -----MGDIQNLITTSRFPGTTLDRIE 211
>gi|402300001|ref|ZP_10819554.1| GTPase YqeH [Bacillus alcalophilus ATCC 27647]
gi|401724792|gb|EJS98121.1| GTPase YqeH [Bacillus alcalophilus ATCC 27647]
Length = 371
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
L DVY+VG TNVGKST N +Q+ D TTS +PGTTL+++
Sbjct: 158 LRQGKDVYIVGATNVGKSTFINKMIQA-----FDGDEEQLITTSHFPGTTLDMI 206
>gi|315641160|ref|ZP_07896238.1| GTP-binding protein [Enterococcus italicus DSM 15952]
gi|315483084|gb|EFU73602.1| GTP-binding protein [Enterococcus italicus DSM 15952]
Length = 375
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +Q +A+ + TTS +PGTTL+
Sbjct: 172 DVYIVGVTNVGKSTLINQIIQ------QATGVKELITTSRFPGTTLD 212
>gi|418412008|ref|ZP_12985274.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
BVS058A4]
gi|410891591|gb|EKS39388.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
BVS058A4]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDVV---TTSRFPGTTLDMI 204
>gi|418325685|ref|ZP_12936891.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU071]
gi|365228287|gb|EHM69472.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU071]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDVV---TTSRFPGTTLDMI 204
>gi|224476705|ref|YP_002634311.1| GTP-binding protein YqeH [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421312|emb|CAL28126.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEH---SVGEKDVV---TTSRFPGTTLDMI 204
>gi|27468201|ref|NP_764838.1| GTP-binding protein YqeH [Staphylococcus epidermidis ATCC 12228]
gi|57867067|ref|YP_188740.1| GTP-binding protein YqeH [Staphylococcus epidermidis RP62A]
gi|251811013|ref|ZP_04825486.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|282875975|ref|ZP_06284842.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis SK135]
gi|293366443|ref|ZP_06613120.1| GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|416125334|ref|ZP_11595932.1| putative GTPase [Staphylococcus epidermidis FRI909]
gi|417656084|ref|ZP_12305775.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU028]
gi|417659637|ref|ZP_12309237.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU045]
gi|417908576|ref|ZP_12552333.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU037]
gi|417913661|ref|ZP_12557324.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU109]
gi|418327846|ref|ZP_12938983.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
14.1.R1.SE]
gi|418605462|ref|ZP_13168786.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU041]
gi|418606028|ref|ZP_13169324.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU057]
gi|418609488|ref|ZP_13172640.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU065]
gi|418612812|ref|ZP_13175836.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU117]
gi|418616314|ref|ZP_13179239.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU120]
gi|418625289|ref|ZP_13187942.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU125]
gi|418626395|ref|ZP_13189007.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU126]
gi|418629354|ref|ZP_13191862.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU127]
gi|418631444|ref|ZP_13193907.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU128]
gi|418665185|ref|ZP_13226635.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU081]
gi|419771845|ref|ZP_14297891.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-K]
gi|420163034|ref|ZP_14669781.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM095]
gi|420167993|ref|ZP_14674645.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM087]
gi|420170303|ref|ZP_14676864.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM070]
gi|420172649|ref|ZP_14679148.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM067]
gi|420183258|ref|ZP_14689391.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM049]
gi|420194894|ref|ZP_14700691.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM021]
gi|420197475|ref|ZP_14703199.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM020]
gi|420199838|ref|ZP_14705508.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM031]
gi|420202364|ref|ZP_14707957.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM018]
gi|420209102|ref|ZP_14714540.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM003]
gi|420211258|ref|ZP_14716632.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM001]
gi|420214056|ref|ZP_14719336.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05005]
gi|420216206|ref|ZP_14721422.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05001]
gi|420220542|ref|ZP_14725501.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04008]
gi|420221618|ref|ZP_14726545.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH08001]
gi|420225793|ref|ZP_14730620.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH06004]
gi|420227386|ref|ZP_14732155.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05003]
gi|420229700|ref|ZP_14734405.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04003]
gi|420232111|ref|ZP_14736753.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051668]
gi|420234758|ref|ZP_14739318.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051475]
gi|421606909|ref|ZP_16048160.1| GTPase YqeH [Staphylococcus epidermidis AU12-03]
gi|27315747|gb|AAO04882.1|AE016748_116 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637725|gb|AAW54513.1| GTP-binding protein, putative [Staphylococcus epidermidis RP62A]
gi|251805523|gb|EES58180.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|281295000|gb|EFA87527.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis SK135]
gi|291319212|gb|EFE59581.1| GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|319400931|gb|EFV89150.1| putative GTPase [Staphylococcus epidermidis FRI909]
gi|329735274|gb|EGG71566.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU045]
gi|329737334|gb|EGG73588.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU028]
gi|341654683|gb|EGS78421.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU109]
gi|341655937|gb|EGS79660.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU037]
gi|365232624|gb|EHM73615.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
14.1.R1.SE]
gi|374402351|gb|EHQ73381.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU041]
gi|374407702|gb|EHQ78554.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU065]
gi|374409160|gb|EHQ79960.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU081]
gi|374409467|gb|EHQ80258.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU057]
gi|374817889|gb|EHR82064.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU117]
gi|374821140|gb|EHR85207.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU120]
gi|374825431|gb|EHR89367.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU125]
gi|374832829|gb|EHR96534.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU126]
gi|374834057|gb|EHR97717.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU127]
gi|374835335|gb|EHR98951.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU128]
gi|383360664|gb|EID38059.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-K]
gi|394234723|gb|EJD80297.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM095]
gi|394238021|gb|EJD83507.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM087]
gi|394240641|gb|EJD86064.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM070]
gi|394241810|gb|EJD87219.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM067]
gi|394249721|gb|EJD94934.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM049]
gi|394263954|gb|EJE08675.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM021]
gi|394266282|gb|EJE10928.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM020]
gi|394269772|gb|EJE14302.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM018]
gi|394271245|gb|EJE15741.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM031]
gi|394279330|gb|EJE23638.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM003]
gi|394281711|gb|EJE25937.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM001]
gi|394283978|gb|EJE28139.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05005]
gi|394285895|gb|EJE29961.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04008]
gi|394290244|gb|EJE34108.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH08001]
gi|394292296|gb|EJE36055.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05001]
gi|394293227|gb|EJE36950.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH06004]
gi|394297192|gb|EJE40801.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05003]
gi|394298994|gb|EJE42549.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04003]
gi|394301833|gb|EJE45287.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051668]
gi|394304001|gb|EJE47411.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051475]
gi|406657378|gb|EKC83766.1| GTPase YqeH [Staphylococcus epidermidis AU12-03]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDVV---TTSRFPGTTLDMI 204
>gi|420206085|ref|ZP_14711595.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM008]
gi|394277924|gb|EJE22241.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM008]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDVV---TTSRFPGTTLDMI 204
>gi|420177913|ref|ZP_14684247.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM057]
gi|420181402|ref|ZP_14687603.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM053]
gi|394246318|gb|EJD91578.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM053]
gi|394247100|gb|EJD92348.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM057]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDVV---TTSRFPGTTLDMI 204
>gi|417912142|ref|ZP_12555837.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU105]
gi|420187200|ref|ZP_14693221.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM039]
gi|341651153|gb|EGS74958.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU105]
gi|394256179|gb|EJE01112.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM039]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDVV---TTSRFPGTTLDMI 204
>gi|417647043|ref|ZP_12296892.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU144]
gi|329725392|gb|EGG61875.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU144]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDVV---TTSRFPGTTLDMI 204
>gi|313890885|ref|ZP_07824509.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus SPIN
20026]
gi|416852866|ref|ZP_11910011.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus LQ
940-04]
gi|313120783|gb|EFR43898.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus SPIN
20026]
gi|356740355|gb|EHI65587.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus LQ
940-04]
Length = 371
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 13 ILVARPEPNIVSADLV-----LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLIS 67
+++ + N DL+ L DVY+VG TNVGKSTL NA +Q +I + I
Sbjct: 139 VMLTSAQNNYAIKDLIASIDKLRRGRDVYVVGVTNVGKSTLINAIIQ----EISGNKNI- 193
Query: 68 RATTSPWPGTTLN 80
TTS +PGTTL+
Sbjct: 194 -ITTSRFPGTTLD 205
>gi|242242875|ref|ZP_04797320.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|418615653|ref|ZP_13178592.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU118]
gi|418633478|ref|ZP_13195891.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU129]
gi|420174637|ref|ZP_14681086.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM061]
gi|420190211|ref|ZP_14696155.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM037]
gi|420192348|ref|ZP_14698208.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM023]
gi|420204515|ref|ZP_14710073.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM015]
gi|242233650|gb|EES35962.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|374816703|gb|EHR80902.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU118]
gi|374839231|gb|EHS02749.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU129]
gi|394244868|gb|EJD90200.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM061]
gi|394259102|gb|EJE03972.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM037]
gi|394261559|gb|EJE06356.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM023]
gi|394273525|gb|EJE17956.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM015]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDVV---TTSRFPGTTLDMI 204
>gi|354806742|ref|ZP_09040222.1| ribosome biogenesis GTPase YqeH [Lactobacillus curvatus CRL 705]
gi|354514717|gb|EHE86684.1| ribosome biogenesis GTPase YqeH [Lactobacillus curvatus CRL 705]
Length = 377
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ I SD+I TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINRIIKQ--TGILDSDVI---TTSQFPGTTLD 213
>gi|295693368|ref|YP_003601978.1| GTP-binding protein [Lactobacillus crispatus ST1]
gi|295031474|emb|CBL50953.1| GTP-binding protein [Lactobacillus crispatus ST1]
Length = 369
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 1 MELWPALEGREVILV-ARPEPNIVSADLVL---SSAGDVYLVGCTNVGKSTLFNAFLQSD 56
M L+P +E+ LV A+ + N+ S + S DVY VG TNVGKSTL NA +
Sbjct: 135 MGLYP----KEIFLVSAKRKVNLESLIAYINKQSQDKDVYFVGTTNVGKSTLINAIIDM- 189
Query: 57 LCKIKASDLISRATTSPWPGTTLNLLK 83
D+ TTS +PGTTL+ ++
Sbjct: 190 -----MGDIQDLITTSRFPGTTLDRIE 211
>gi|389853433|ref|YP_006355677.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
NZ9000]
gi|300069855|gb|ADJ59255.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 401
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++S AS TTS +PGTTL+
Sbjct: 202 DVYVVGVTNVGKSTLINAIIKS------ASGSEDVITTSRFPGTTLD 242
>gi|116511050|ref|YP_808266.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris SK11]
gi|116106704|gb|ABJ71844.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11]
Length = 401
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++S AS TTS +PGTTL+
Sbjct: 202 DVYVVGVTNVGKSTLINAIIKS------ASGSEDVITTSRFPGTTLD 242
>gi|312110147|ref|YP_003988463.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y4.1MC1]
gi|311215248|gb|ADP73852.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y4.1MC1]
Length = 367
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+VY+VGCTNVGKST N +Q K ++I TTS +PGTTL++++
Sbjct: 162 NVYVVGCTNVGKSTFINRIIQETTGK---GNVI---TTSYFPGTTLDIIE 205
>gi|81429003|ref|YP_396003.1| GTP-binding protein YqeH [Lactobacillus sakei subsp. sakei 23K]
gi|78610645|emb|CAI55696.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
Length = 378
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ I SD+I TTS +PGTTL+
Sbjct: 173 DVYVVGVTNVGKSTLINRIIKQ--TGILDSDVI---TTSQFPGTTLD 214
>gi|357639081|ref|ZP_09136954.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis 2285-97]
gi|418417147|ref|ZP_12990345.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis
FB127-CNA-2]
gi|357587535|gb|EHJ56943.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis 2285-97]
gi|410873203|gb|EKS21139.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis
FB127-CNA-2]
Length = 370
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|422863178|ref|ZP_16909810.1| GTP-binding protein [Streptococcus sanguinis SK408]
gi|327473478|gb|EGF18898.1| GTP-binding protein [Streptococcus sanguinis SK408]
Length = 368
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSHFPGTTLD 205
>gi|311031591|ref|ZP_07709681.1| GTP-binding protein YqeH [Bacillus sp. m3-13]
Length = 367
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VGCTNVGKST N ++ + D+I TTS +PGTTL+++
Sbjct: 162 DVYVVGCTNVGKSTFINRIIREFSGE---EDVI---TTSQFPGTTLDMI 204
>gi|336234611|ref|YP_004587227.1| ribosome biogenesis GTPase YqeH [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719182|ref|ZP_17693364.1| ribosome biogenesis GTPase yqeH [Geobacillus thermoglucosidans
TNO-09.020]
gi|335361466|gb|AEH47146.1| ribosome biogenesis GTPase YqeH [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368085|gb|EID45360.1| ribosome biogenesis GTPase yqeH [Geobacillus thermoglucosidans
TNO-09.020]
Length = 367
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+VY+VGCTNVGKST N +Q K ++I TTS +PGTTL++++
Sbjct: 162 NVYVVGCTNVGKSTFINRIIQETTGK---GNVI---TTSYFPGTTLDIIE 205
>gi|385837239|ref|YP_005874869.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris A76]
gi|414073525|ref|YP_006998742.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
UC509.9]
gi|358748467|gb|AEU39446.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris A76]
gi|413973445|gb|AFW90909.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 391
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++S AS TTS +PGTTL+
Sbjct: 192 DVYVVGVTNVGKSTLINAIIKS------ASGSEDVITTSRFPGTTLD 232
>gi|172056802|ref|YP_001813262.1| GTP-binding protein YqeH [Exiguobacterium sibiricum 255-15]
gi|171989323|gb|ACB60245.1| Nitric-oxide synthase [Exiguobacterium sibiricum 255-15]
Length = 374
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCK 93
DVY+VGCTNVGKSTL N + K + + T S +PGTTL+L+ I + C
Sbjct: 167 DVYVVGCTNVGKSTLINQVI-----KRFGEEEEAVITVSHFPGTTLDLID--IPLDDNCN 219
Query: 94 VKE----LGKKILLSQVKGKNMSK-TEKKPLQPQ 122
+ + + + V +++ T KK ++PQ
Sbjct: 220 LYDTPGIINHHQMAHYVDARDLKLITPKKEIKPQ 253
>gi|222152534|ref|YP_002561709.1| GTP-binding protein YqeH [Streptococcus uberis 0140J]
gi|222113345|emb|CAR40947.1| GTP-binding protein [Streptococcus uberis 0140J]
Length = 372
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|326803787|ref|YP_004321605.1| ribosome biogenesis GTPase YqeH [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650122|gb|AEA00305.1| ribosome biogenesis GTPase YqeH [Aerococcus urinae
ACS-120-V-Col10a]
Length = 370
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+VY+VG +NVGKSTL N+ L++ SD S TTS +PGTTL+L+K
Sbjct: 167 NVYIVGVSNVGKSTLINSMLRAQ----GFSD--SVITTSQFPGTTLDLIK 210
>gi|242373901|ref|ZP_04819475.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1]
gi|242348455|gb|EES40057.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1]
Length = 366
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIE---ISVGEKDVV---TTSRFPGTTLDMI 204
>gi|146318021|ref|YP_001197733.1| GTPase [Streptococcus suis 05ZYH33]
gi|145688827|gb|ABP89333.1| Predicted GTPase [Streptococcus suis 05ZYH33]
Length = 212
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|410494094|ref|YP_006903940.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417927491|ref|ZP_12570879.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765365|gb|EGR87891.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|410439254|emb|CCI61882.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 372
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
L + DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL
Sbjct: 160 LRNGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTL 204
>gi|422846086|ref|ZP_16892769.1| GTP-binding protein [Streptococcus sanguinis SK72]
gi|325688137|gb|EGD30156.1| GTP-binding protein [Streptococcus sanguinis SK72]
Length = 368
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|300173713|ref|YP_003772879.1| GTP-binding protein yqeH [Leuconostoc gasicomitatum LMG 18811]
gi|333447983|ref|ZP_08482925.1| GTPase YqeH [Leuconostoc inhae KCTC 3774]
gi|299888092|emb|CBL92060.1| GTP-binding protein yqeH [Leuconostoc gasicomitatum LMG 18811]
Length = 382
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++S DLI TTS +PGTTL+ ++
Sbjct: 181 DVYVVGVTNVGKSTLINQIIKS---GTGVQDLI---TTSRFPGTTLDRIE 224
>gi|261405558|ref|YP_003241799.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. Y412MC10]
gi|261282021|gb|ACX63992.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. Y412MC10]
Length = 375
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKS+L N ++ SDL T S +PGTTL+++
Sbjct: 168 DVYVVGATNVGKSSLINRLIRD------YSDLDQELTVSRYPGTTLDMV 210
>gi|315645928|ref|ZP_07899049.1| ribosome biogenesis GTPase YqeH [Paenibacillus vortex V453]
gi|315278689|gb|EFU42003.1| ribosome biogenesis GTPase YqeH [Paenibacillus vortex V453]
Length = 374
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKS+L N ++ SDL T S +PGTTL+++
Sbjct: 167 DVYVVGATNVGKSSLINRLIRD------YSDLDQELTVSRYPGTTLDMV 209
>gi|452975135|gb|EME74954.1| GTPase YqeH [Bacillus sonorensis L12]
Length = 366
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIKE---VSGEGDII---TTSQYPGTTLDAIE 204
>gi|157149789|ref|YP_001449761.1| GTP-binding protein YqeH [Streptococcus gordonii str. Challis
substr. CH1]
gi|157074583|gb|ABV09266.1| GTP-binding protein [Streptococcus gordonii str. Challis substr.
CH1]
Length = 368
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|329116389|ref|ZP_08245106.1| ribosome biogenesis GTPase YqeH [Streptococcus parauberis NCFD
2020]
gi|326906794|gb|EGE53708.1| ribosome biogenesis GTPase YqeH [Streptococcus parauberis NCFD
2020]
Length = 372
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|418965891|ref|ZP_13517649.1| ribosome biogenesis GTPase YqeH [Streptococcus constellatus subsp.
constellatus SK53]
gi|383341525|gb|EID19784.1| ribosome biogenesis GTPase YqeH [Streptococcus constellatus subsp.
constellatus SK53]
Length = 368
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQEITGD---KDII---TTSRFPGTTLD 205
>gi|374672293|dbj|BAL50184.1| GTP-binding protein [Lactococcus lactis subsp. lactis IO-1]
Length = 401
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++S AS TTS +PGTTL+
Sbjct: 202 DVYVVGVTNVGKSTLINAIIKS------ASGSEDVITTSRFPGTTLD 242
>gi|422871490|ref|ZP_16917983.1| GTP-binding protein [Streptococcus sanguinis SK1087]
gi|328945658|gb|EGG39809.1| GTP-binding protein [Streptococcus sanguinis SK1087]
Length = 368
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|319946393|ref|ZP_08020630.1| GTP-binding protein [Streptococcus australis ATCC 700641]
gi|417919967|ref|ZP_12563488.1| ribosome biogenesis GTPase YqeH [Streptococcus australis ATCC
700641]
gi|319747361|gb|EFV99617.1| GTP-binding protein [Streptococcus australis ATCC 700641]
gi|342831523|gb|EGU65839.1| ribosome biogenesis GTPase YqeH [Streptococcus australis ATCC
700641]
Length = 368
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|281490709|ref|YP_003352689.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
gi|281374478|gb|ADA63999.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
Length = 401
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++S AS TTS +PGTTL+
Sbjct: 202 DVYVVGVTNVGKSTLINAIIKS------ASGSEDVITTSRFPGTTLD 242
>gi|262282075|ref|ZP_06059844.1| GTP-binding protein YqeH [Streptococcus sp. 2_1_36FAA]
gi|262262529|gb|EEY81226.1| GTP-binding protein YqeH [Streptococcus sp. 2_1_36FAA]
Length = 368
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|260663501|ref|ZP_05864391.1| ribosome biogenesis GTPase YqeH [Lactobacillus fermentum 28-3-CHN]
gi|260552042|gb|EEX25095.1| ribosome biogenesis GTPase YqeH [Lactobacillus fermentum 28-3-CHN]
Length = 374
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNVGKSTLINQIIKQ---RTGVEDLI---TTSRFPGTTLD 211
>gi|336395193|ref|ZP_08576592.1| GTPase YqeH [Lactobacillus farciminis KCTC 3681]
Length = 370
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N + S+ SD+ TTS +PGTTL+
Sbjct: 170 DVYVVGTTNTGKSTLINRIISSN------SDIKDLITTSRFPGTTLD 210
>gi|322388976|ref|ZP_08062546.1| GTP-binding protein [Streptococcus parasanguinis ATCC 903]
gi|321144281|gb|EFX39689.1| GTP-binding protein [Streptococcus parasanguinis ATCC 903]
Length = 368
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|422852211|ref|ZP_16898881.1| GTP-binding protein [Streptococcus sanguinis SK150]
gi|325693537|gb|EGD35456.1| GTP-binding protein [Streptococcus sanguinis SK150]
Length = 368
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|422825769|ref|ZP_16873948.1| GTP-binding protein [Streptococcus sanguinis SK678]
gi|324995205|gb|EGC27117.1| GTP-binding protein [Streptococcus sanguinis SK678]
Length = 368
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|184155783|ref|YP_001844123.1| GTP-binding protein YqeH [Lactobacillus fermentum IFO 3956]
gi|227515625|ref|ZP_03945674.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
gi|385812532|ref|YP_005848923.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
gi|183227127|dbj|BAG27643.1| GTPase [Lactobacillus fermentum IFO 3956]
gi|227086055|gb|EEI21367.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
gi|299783429|gb|ADJ41427.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
Length = 374
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNVGKSTLINQIIKQ---RTGVEDLI---TTSRFPGTTLD 211
>gi|456370287|gb|EMF49183.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
Length = 372
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|392429164|ref|YP_006470175.1| GTP-binding protein [Streptococcus intermedius JTH08]
gi|419776069|ref|ZP_14301992.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius SK54]
gi|383846277|gb|EID83676.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius SK54]
gi|391758310|dbj|BAM23927.1| GTP-binding protein [Streptococcus intermedius JTH08]
Length = 368
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|329925908|ref|ZP_08280618.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF5]
gi|328939559|gb|EGG35908.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF5]
Length = 375
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKS+L N ++ SDL T S +PGTTL+++
Sbjct: 168 DVYVVGATNVGKSSLINRLIRD------YSDLDQELTVSRYPGTTLDMV 210
>gi|424788334|ref|ZP_18215089.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius BA1]
gi|422112837|gb|EKU16599.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius BA1]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|423071276|ref|ZP_17060051.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0413]
gi|355364638|gb|EHG12370.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0413]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|422879449|ref|ZP_16925915.1| GTP-binding protein [Streptococcus sanguinis SK1059]
gi|422929294|ref|ZP_16962236.1| GTP-binding protein [Streptococcus sanguinis ATCC 29667]
gi|422932265|ref|ZP_16965196.1| GTP-binding protein [Streptococcus sanguinis SK340]
gi|332366161|gb|EGJ43917.1| GTP-binding protein [Streptococcus sanguinis SK1059]
gi|339615110|gb|EGQ19793.1| GTP-binding protein [Streptococcus sanguinis ATCC 29667]
gi|339619049|gb|EGQ23639.1| GTP-binding protein [Streptococcus sanguinis SK340]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|422883434|ref|ZP_16929883.1| GTP-binding protein [Streptococcus sanguinis SK49]
gi|332363372|gb|EGJ41157.1| GTP-binding protein [Streptococcus sanguinis SK49]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|385813393|ref|YP_005849786.1| Ribosome biogenesis GTPase YqeH [Lactobacillus helveticus H10]
gi|323466112|gb|ADX69799.1| Ribosome biogenesis GTPase YqeH [Lactobacillus helveticus H10]
Length = 369
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
S DVY VG TNVGKSTL NA + D+ + TTS +PGTTL+
Sbjct: 164 SQDKDVYFVGTTNVGKSTLINAIIDM------MGDIQNLITTSRFPGTTLD 208
>gi|161507853|ref|YP_001577817.1| GTP-binding protein YqeH [Lactobacillus helveticus DPC 4571]
gi|160348842|gb|ABX27516.1| GTP-binding protein [Lactobacillus helveticus DPC 4571]
Length = 369
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
S DVY VG TNVGKSTL NA + D+ + TTS +PGTTL+
Sbjct: 164 SQDKDVYFVGTTNVGKSTLINAIIDM------MGDIQNLITTSRFPGTTLD 208
>gi|357509569|ref|XP_003625073.1| hypothetical protein MTR_7g090640 [Medicago truncatula]
gi|355500088|gb|AES81291.1| hypothetical protein MTR_7g090640 [Medicago truncatula]
Length = 631
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NAF + + K +++ T +P PGTTL +L+
Sbjct: 362 GNVWVIGAQNAGKSTLINAFAKKEGAK------VTKLTEAPVPGTTLGILR 406
>gi|339639756|ref|ZP_08661200.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 056
str. F0418]
gi|339453025|gb|EGP65640.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 056
str. F0418]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|422859067|ref|ZP_16905717.1| GTP-binding protein [Streptococcus sanguinis SK1057]
gi|327458847|gb|EGF05195.1| GTP-binding protein [Streptococcus sanguinis SK1057]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|422849255|ref|ZP_16895931.1| GTP-binding protein [Streptococcus sanguinis SK115]
gi|422877039|ref|ZP_16923509.1| GTP-binding protein [Streptococcus sanguinis SK1056]
gi|325690276|gb|EGD32280.1| GTP-binding protein [Streptococcus sanguinis SK115]
gi|332360512|gb|EGJ38322.1| GTP-binding protein [Streptococcus sanguinis SK1056]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|406659581|ref|ZP_11067719.1| ribosome biogenesis GTPase YqeH [Streptococcus iniae 9117]
gi|405577690|gb|EKB51838.1| ribosome biogenesis GTPase YqeH [Streptococcus iniae 9117]
Length = 372
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q + S TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIQ------EVSGDKEVITTSRFPGTTLD 205
>gi|417917766|ref|ZP_12561325.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis SK236]
gi|342830403|gb|EGU64742.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis SK236]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|333905648|ref|YP_004479519.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|333120913|gb|AEF25847.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|457096140|gb|EMG26611.1| GTP-binding protein [Streptococcus parauberis KRS-02083]
Length = 372
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|314933767|ref|ZP_07841132.1| ribosome biogenesis GTPase YqeH [Staphylococcus caprae C87]
gi|313653917|gb|EFS17674.1| ribosome biogenesis GTPase YqeH [Staphylococcus caprae C87]
Length = 366
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYVVGTTNVGKSTLINKLIE---ISVGEKDVV---TTSRFPGTTLDMI 204
>gi|422860728|ref|ZP_16907372.1| GTP-binding protein [Streptococcus sanguinis SK330]
gi|327469111|gb|EGF14583.1| GTP-binding protein [Streptococcus sanguinis SK330]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|227892823|ref|ZP_04010628.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
gi|227865325|gb|EEJ72746.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
Length = 369
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
S DVY VG TNVGKSTL NA + D+ TTS +PGTTL+
Sbjct: 164 SQDKDVYFVGTTNVGKSTLINAIIDM------MGDIQDLITTSRFPGTTLD 208
>gi|403061018|ref|YP_006649234.1| GTPase YqeH [Streptococcus suis S735]
gi|402808344|gb|AFQ99835.1| GTPase YqeH [Streptococcus suis S735]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|401682347|ref|ZP_10814241.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. AS14]
gi|400184783|gb|EJO19021.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. AS14]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|381182528|ref|ZP_09891330.1| GTPase YqeH [Listeriaceae bacterium TTU M1-001]
gi|380317578|gb|EIA20895.1| GTPase YqeH [Listeriaceae bacterium TTU M1-001]
Length = 366
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DV++VGCTNVGKSTL N ++ A+ + TTS +PGTTL+
Sbjct: 157 LRDGADVFVVGCTNVGKSTLINRIIKF------ATGENNVITTSQFPGTTLD 202
>gi|125717436|ref|YP_001034569.1| GTP-binding protein YqeH [Streptococcus sanguinis SK36]
gi|125497353|gb|ABN44019.1| Conserved GTPase, putative [Streptococcus sanguinis SK36]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|146320205|ref|YP_001199916.1| GTP-binding protein YqeH [Streptococcus suis 98HAH33]
gi|253751231|ref|YP_003024372.1| GTP-binding protein YqeH [Streptococcus suis SC84]
gi|253753132|ref|YP_003026272.1| GTP-binding protein YqeH [Streptococcus suis P1/7]
gi|253754955|ref|YP_003028095.1| GTP-binding protein YqeH [Streptococcus suis BM407]
gi|330832202|ref|YP_004401027.1| GTP-binding protein YqeH [Streptococcus suis ST3]
gi|386577334|ref|YP_006073739.1| GTP-binding protein [Streptococcus suis GZ1]
gi|386579314|ref|YP_006075719.1| GTP-binding protein YqeH [Streptococcus suis JS14]
gi|386581378|ref|YP_006077782.1| GTP-binding protein YqeH [Streptococcus suis SS12]
gi|386583488|ref|YP_006079891.1| GTP-binding protein YqeH [Streptococcus suis D9]
gi|386587609|ref|YP_006084010.1| GTP-binding protein YqeH [Streptococcus suis A7]
gi|145691011|gb|ABP91516.1| Predicted GTPase [Streptococcus suis 98HAH33]
gi|251815520|emb|CAZ51100.1| GTP-binding protein [Streptococcus suis SC84]
gi|251817419|emb|CAZ55157.1| GTP-binding protein [Streptococcus suis BM407]
gi|251819377|emb|CAR44789.1| GTP-binding protein [Streptococcus suis P1/7]
gi|292557796|gb|ADE30797.1| GTP-binding protein [Streptococcus suis GZ1]
gi|319757506|gb|ADV69448.1| GTP-binding protein YqeH [Streptococcus suis JS14]
gi|329306425|gb|AEB80841.1| GTP-binding protein YqeH [Streptococcus suis ST3]
gi|353733524|gb|AER14534.1| GTP-binding protein YqeH [Streptococcus suis SS12]
gi|353735634|gb|AER16643.1| GTP-binding protein YqeH [Streptococcus suis D9]
gi|354984770|gb|AER43668.1| GTP-binding protein YqeH [Streptococcus suis A7]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|223932251|ref|ZP_03624255.1| Nitric-oxide synthase [Streptococcus suis 89/1591]
gi|223899232|gb|EEF65589.1| Nitric-oxide synthase [Streptococcus suis 89/1591]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|422821793|ref|ZP_16869986.1| GTP-binding protein [Streptococcus sanguinis SK353]
gi|324990744|gb|EGC22680.1| GTP-binding protein [Streptococcus sanguinis SK353]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|323353254|ref|ZP_08087787.1| GTP-binding protein [Streptococcus sanguinis VMC66]
gi|322121200|gb|EFX92963.1| GTP-binding protein [Streptococcus sanguinis VMC66]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|312867215|ref|ZP_07727425.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0405]
gi|419799139|ref|ZP_14324507.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0449]
gi|311097344|gb|EFQ55578.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0405]
gi|385698679|gb|EIG29026.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0449]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|337281510|ref|YP_004620981.1| GTP-binding protein [Streptococcus parasanguinis ATCC 15912]
gi|387879069|ref|YP_006309372.1| hypothetical protein Spaf_0549 [Streptococcus parasanguinis FW213]
gi|335369103|gb|AEH55053.1| GTP-binding protein [Streptococcus parasanguinis ATCC 15912]
gi|386792524|gb|AFJ25559.1| hypothetical protein Spaf_0549 [Streptococcus parasanguinis FW213]
Length = 368
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|195978787|ref|YP_002124031.1| GTP-binding protein YqeH [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975492|gb|ACG63018.1| GTPase [Streptococcus equi subsp. zooepidemicus MGCS10565]
Length = 372
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRQRRDVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|414157031|ref|ZP_11413331.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0442]
gi|410868347|gb|EKS16312.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0442]
Length = 368
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|256850837|ref|ZP_05556226.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 27-2-CHN]
gi|260661048|ref|ZP_05861962.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 115-3-CHN]
gi|297205711|ref|ZP_06923106.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii JV-V16]
gi|256615899|gb|EEU21087.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 27-2-CHN]
gi|260547985|gb|EEX23961.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 115-3-CHN]
gi|297148837|gb|EFH29135.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii JV-V16]
Length = 369
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S DVY VG TNVGKSTL N+ + DL DLI TTS +PGTTL+ +K
Sbjct: 164 SQNQDVYFVGTTNVGKSTLINSII--DLMG-DVKDLI---TTSRFPGTTLDQIK 211
>gi|260103146|ref|ZP_05753383.1| GTP-binding protein [Lactobacillus helveticus DSM 20075]
gi|417009774|ref|ZP_11945910.1| GTPase YqeH [Lactobacillus helveticus MTCC 5463]
gi|260083056|gb|EEW67176.1| GTP-binding protein [Lactobacillus helveticus DSM 20075]
gi|328464795|gb|EGF36110.1| GTPase YqeH [Lactobacillus helveticus MTCC 5463]
Length = 369
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
S DVY VG TNVGKSTL NA + D+ + TTS +PGTTL+
Sbjct: 164 SQDKDVYFVGTTNVGKSTLINAIIDM------MGDIQNLITTSRFPGTTLD 208
>gi|389856062|ref|YP_006358305.1| GTP-binding protein YqeH [Streptococcus suis ST1]
gi|353739780|gb|AER20787.1| GTP-binding protein YqeH [Streptococcus suis ST1]
Length = 368
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|417091550|ref|ZP_11956427.1| GTP-binding protein YqeH [Streptococcus suis R61]
gi|353533158|gb|EHC02825.1| GTP-binding protein YqeH [Streptococcus suis R61]
Length = 368
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|386585533|ref|YP_006081935.1| GTP-binding protein YqeH [Streptococcus suis D12]
gi|353737679|gb|AER18687.1| GTP-binding protein YqeH [Streptococcus suis D12]
Length = 368
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|433462862|ref|ZP_20420433.1| GTPase YqeH [Halobacillus sp. BAB-2008]
gi|432188318|gb|ELK45522.1| GTPase YqeH [Halobacillus sp. BAB-2008]
Length = 366
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
+ GDVY+VG TNVGKST N + + S + TTS +PGTTL +
Sbjct: 158 NGGDVYVVGTTNVGKSTFINTLISN------TSGVKDAITTSYFPGTTLGFI 203
>gi|322386055|ref|ZP_08059694.1| GTP-binding protein [Streptococcus cristatus ATCC 51100]
gi|417922565|ref|ZP_12566053.1| ribosome biogenesis GTPase YqeH [Streptococcus cristatus ATCC
51100]
gi|321269899|gb|EFX52820.1| GTP-binding protein [Streptococcus cristatus ATCC 51100]
gi|342832662|gb|EGU66957.1| ribosome biogenesis GTPase YqeH [Streptococcus cristatus ATCC
51100]
Length = 368
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDVI---TTSRFPGTTLD 205
>gi|238854460|ref|ZP_04644799.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 269-3]
gi|260665492|ref|ZP_05866339.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii SJ-7A-US]
gi|313471824|ref|ZP_07812316.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 1153]
gi|238832887|gb|EEQ25185.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 269-3]
gi|239530132|gb|EEQ69133.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 1153]
gi|260560760|gb|EEX26737.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii SJ-7A-US]
Length = 369
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
S DVY VG TNVGKSTL N+ + DL DLI TTS +PGTTL+ +K I +
Sbjct: 164 SQDQDVYFVGTTNVGKSTLINSII--DLMG-DVKDLI---TTSRFPGTTLDQIK--IPLD 215
Query: 90 TVCKVKE----LGKKILLSQVKGKNMSK-TEKKPLQP 121
+ + + + +K L S + K++ KKPL+P
Sbjct: 216 SGHYLVDTPGIMTEKQLASYLNAKDLDLIAPKKPLKP 252
>gi|87241448|gb|ABD33306.1| Protein C4orf14 homolog, related [Medicago truncatula]
Length = 616
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NAF + + K +++ T +P PGTTL +L+
Sbjct: 362 GNVWVIGAQNAGKSTLINAFAKKEGAK------VTKLTEAPVPGTTLGILR 406
>gi|422881687|ref|ZP_16928143.1| GTP-binding protein [Streptococcus sanguinis SK355]
gi|332363929|gb|EGJ41708.1| GTP-binding protein [Streptococcus sanguinis SK355]
Length = 368
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|331266921|ref|YP_004326551.1| GTP-binding protein [Streptococcus oralis Uo5]
gi|326683593|emb|CBZ01211.1| GTP-binding protein [Streptococcus oralis Uo5]
Length = 368
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDQDVI---TTSRFPGTTLD 205
>gi|422853681|ref|ZP_16900345.1| GTP-binding protein [Streptococcus sanguinis SK160]
gi|325696992|gb|EGD38879.1| GTP-binding protein [Streptococcus sanguinis SK160]
Length = 368
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|422824158|ref|ZP_16872346.1| GTP-binding protein [Streptococcus sanguinis SK405]
gi|422856095|ref|ZP_16902753.1| GTP-binding protein [Streptococcus sanguinis SK1]
gi|422866065|ref|ZP_16912690.1| GTP-binding protein [Streptococcus sanguinis SK1058]
gi|324993485|gb|EGC25405.1| GTP-binding protein [Streptococcus sanguinis SK405]
gi|327461756|gb|EGF08087.1| GTP-binding protein [Streptococcus sanguinis SK1]
gi|327489041|gb|EGF20836.1| GTP-binding protein [Streptococcus sanguinis SK1058]
Length = 368
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQE---ITGDKDII---TTSRFPGTTLD 205
>gi|221059269|ref|XP_002260280.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810353|emb|CAQ41547.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 824
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISR-----ATTSPWPGTTLNL-- 81
L D+Y+VGC NVGKS+ N+FL+ K D+ S+ TTS P TTLN
Sbjct: 485 LEKGTDIYIVGCVNVGKSSFVNSFLKYINYK-HIGDIYSKRKKGGVTTSNIPYTTLNYNT 543
Query: 82 --LKEIIKI 88
LK+ IKI
Sbjct: 544 FQLKKNIKI 552
>gi|450175542|ref|ZP_21885246.1| GTP-binding protein YqeH [Streptococcus mutans SM1]
gi|449246628|gb|EMC44927.1| GTP-binding protein YqeH [Streptococcus mutans SM1]
Length = 368
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449961116|ref|ZP_21810793.1| GTP-binding protein YqeH [Streptococcus mutans 4VF1]
gi|449166974|gb|EMB69883.1| GTP-binding protein YqeH [Streptococcus mutans 4VF1]
Length = 368
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450145066|ref|ZP_21874391.1| GTP-binding protein YqeH [Streptococcus mutans 1ID3]
gi|449149787|gb|EMB53574.1| GTP-binding protein YqeH [Streptococcus mutans 1ID3]
Length = 368
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|167037775|ref|YP_001665353.1| GTP-binding protein Era [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039985|ref|YP_001662970.1| GTP-binding protein Era [Thermoanaerobacter sp. X514]
gi|256751969|ref|ZP_05492839.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus CCSD1]
gi|300914075|ref|ZP_07131391.1| GTP-binding protein Era [Thermoanaerobacter sp. X561]
gi|307724692|ref|YP_003904443.1| GTP-binding protein Era [Thermoanaerobacter sp. X513]
gi|320116190|ref|YP_004186349.1| GTP-binding protein Era [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|226741400|sp|B0KA54.1|ERA_THEP3 RecName: Full=GTPase Era
gi|226741401|sp|B0K708.1|ERA_THEPX RecName: Full=GTPase Era
gi|166854225|gb|ABY92634.1| GTP-binding protein Era [Thermoanaerobacter sp. X514]
gi|166856609|gb|ABY95017.1| GTP-binding protein Era [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256749174|gb|EEU62208.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus CCSD1]
gi|300889010|gb|EFK84156.1| GTP-binding protein Era [Thermoanaerobacter sp. X561]
gi|307581753|gb|ADN55152.1| GTP-binding protein Era [Thermoanaerobacter sp. X513]
gi|319929281|gb|ADV79966.1| GTP-binding protein Era [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 302
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
AG V LVG TNVGKSTL NA LQ + A TSP P TT N ++ I+
Sbjct: 3 HKAGFVALVGRTNVGKSTLLNAILQEKI-----------AITSPKPQTTRNTIRGIL 48
>gi|336114443|ref|YP_004569210.1| nitric-oxide synthase [Bacillus coagulans 2-6]
gi|335367873|gb|AEH53824.1| Nitric-oxide synthase [Bacillus coagulans 2-6]
Length = 368
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+ GCTNVGKST N ++ D+I TTS +PGTTL+++
Sbjct: 163 DVYVAGCTNVGKSTFINRIIRQ---ATGEKDVI---TTSYFPGTTLDMI 205
>gi|392941235|ref|ZP_10306879.1| GTP-binding protein Era [Thermoanaerobacter siderophilus SR4]
gi|392292985|gb|EIW01429.1| GTP-binding protein Era [Thermoanaerobacter siderophilus SR4]
Length = 302
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
AG V LVG TNVGKSTL NA LQ + A TSP P TT N ++ I+
Sbjct: 3 HKAGFVALVGRTNVGKSTLLNAILQEKI-----------AITSPKPQTTRNTIRGIL 48
>gi|387785525|ref|YP_006250621.1| putative GTP-binding protein [Streptococcus mutans LJ23]
gi|450169919|ref|ZP_21883266.1| GTP-binding protein YqeH [Streptococcus mutans SM4]
gi|379131926|dbj|BAL68678.1| putative GTP-binding protein [Streptococcus mutans LJ23]
gi|449246500|gb|EMC44803.1| GTP-binding protein YqeH [Streptococcus mutans SM4]
Length = 368
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|339448445|ref|ZP_08652001.1| GTPase YqeH [Lactobacillus fructivorans KCTC 3543]
Length = 372
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+VY+VG TNVGKSTL N +Q + + TTS +PGTTL+L+K
Sbjct: 171 NVYVVGVTNVGKSTLINQIIQQSTGEKQV------ITTSKFPGTTLDLIK 214
>gi|450044471|ref|ZP_21837871.1| GTP-binding protein YqeH [Streptococcus mutans N34]
gi|449201640|gb|EMC02626.1| GTP-binding protein YqeH [Streptococcus mutans N34]
Length = 368
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|374709075|ref|ZP_09713509.1| GTPase YqeH [Sporolactobacillus inulinus CASD]
Length = 366
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKST N +Q + D S TTS +PGTTL+ ++
Sbjct: 161 DVYVVGATNVGKSTFINHLIQ----HLGTGD--SAITTSRFPGTTLDFIE 204
>gi|450089114|ref|ZP_21855043.1| GTP-binding protein YqeH [Streptococcus mutans NV1996]
gi|449215966|gb|EMC16128.1| GTP-binding protein YqeH [Streptococcus mutans NV1996]
Length = 368
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450006352|ref|ZP_21827181.1| GTP-binding protein YqeH [Streptococcus mutans NMT4863]
gi|449187647|gb|EMB89415.1| GTP-binding protein YqeH [Streptococcus mutans NMT4863]
Length = 368
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449976730|ref|ZP_21816343.1| GTP-binding protein YqeH [Streptococcus mutans 11VS1]
gi|449175269|gb|EMB77696.1| GTP-binding protein YqeH [Streptococcus mutans 11VS1]
Length = 368
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449982204|ref|ZP_21818184.1| GTP-binding protein YqeH [Streptococcus mutans 5SM3]
gi|450036899|ref|ZP_21835667.1| GTP-binding protein YqeH [Streptococcus mutans M21]
gi|450107703|ref|ZP_21861140.1| GTP-binding protein YqeH [Streptococcus mutans SF14]
gi|450110540|ref|ZP_21862154.1| GTP-binding protein YqeH [Streptococcus mutans SM6]
gi|450160189|ref|ZP_21879859.1| GTP-binding protein YqeH [Streptococcus mutans 66-2A]
gi|449175079|gb|EMB77524.1| GTP-binding protein YqeH [Streptococcus mutans 5SM3]
gi|449193095|gb|EMB94490.1| GTP-binding protein YqeH [Streptococcus mutans M21]
gi|449221545|gb|EMC21314.1| GTP-binding protein YqeH [Streptococcus mutans SF14]
gi|449225021|gb|EMC24640.1| GTP-binding protein YqeH [Streptococcus mutans SM6]
gi|449240379|gb|EMC39058.1| GTP-binding protein YqeH [Streptococcus mutans 66-2A]
Length = 368
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|58337796|ref|YP_194381.1| GTP-binding protein YqeH [Lactobacillus acidophilus NCFM]
gi|227904446|ref|ZP_04022251.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
gi|58255113|gb|AAV43350.1| GTP-binding protein [Lactobacillus acidophilus NCFM]
gi|227867821|gb|EEJ75242.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
Length = 369
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
S DVY VG TNVGKSTL NA + D+ TTS +PGTTL+
Sbjct: 164 SQDKDVYFVGTTNVGKSTLINAIID------MMGDIQDLITTSRFPGTTLD 208
>gi|167756987|ref|ZP_02429114.1| hypothetical protein CLORAM_02536 [Clostridium ramosum DSM 1402]
gi|237732927|ref|ZP_04563408.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|365833456|ref|ZP_09374972.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 3_3_56FAA]
gi|374625564|ref|ZP_09697980.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 8_2_54BFAA]
gi|167703162|gb|EDS17741.1| ribosome biogenesis GTPase YqeH [Clostridium ramosum DSM 1402]
gi|229383996|gb|EEO34087.1| conserved hypothetical protein [Coprobacillus sp. D7]
gi|365257900|gb|EHM87923.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 3_3_56FAA]
gi|373915224|gb|EHQ46995.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 8_2_54BFAA]
Length = 365
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKS+L N+ L K A + TTS +PGTTL+L++
Sbjct: 162 DVYIVGVTNVGKSSLINSLL-----KHYAGVTDNLITTSEFPGTTLDLIE 206
>gi|449876633|ref|ZP_21782890.1| GTP-binding protein YqeH [Streptococcus mutans S1B]
gi|449252026|gb|EMC50018.1| GTP-binding protein YqeH [Streptococcus mutans S1B]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449988609|ref|ZP_21820627.1| GTP-binding protein YqeH [Streptococcus mutans NVAB]
gi|449183787|gb|EMB85761.1| GTP-binding protein YqeH [Streptococcus mutans NVAB]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449887306|ref|ZP_21786721.1| GTP-binding protein YqeH [Streptococcus mutans SA41]
gi|449904711|ref|ZP_21792811.1| GTP-binding protein YqeH [Streptococcus mutans M230]
gi|449938690|ref|ZP_21805016.1| GTP-binding protein YqeH [Streptococcus mutans 2ST1]
gi|449942606|ref|ZP_21806101.1| GTP-binding protein YqeH [Streptococcus mutans 11A1]
gi|450039516|ref|ZP_21836227.1| GTP-binding protein YqeH [Streptococcus mutans T4]
gi|450078570|ref|ZP_21851060.1| GTP-binding protein YqeH [Streptococcus mutans N3209]
gi|450154621|ref|ZP_21877857.1| GTP-binding protein YqeH [Streptococcus mutans 21]
gi|450181255|ref|ZP_21887717.1| GTP-binding protein YqeH [Streptococcus mutans 24]
gi|449150345|gb|EMB54113.1| GTP-binding protein YqeH [Streptococcus mutans 11A1]
gi|449162533|gb|EMB65664.1| GTP-binding protein YqeH [Streptococcus mutans 2ST1]
gi|449200330|gb|EMC01363.1| GTP-binding protein YqeH [Streptococcus mutans T4]
gi|449209880|gb|EMC10376.1| GTP-binding protein YqeH [Streptococcus mutans N3209]
gi|449237723|gb|EMC36538.1| GTP-binding protein YqeH [Streptococcus mutans 21]
gi|449246925|gb|EMC45219.1| GTP-binding protein YqeH [Streptococcus mutans 24]
gi|449253035|gb|EMC51000.1| GTP-binding protein YqeH [Streptococcus mutans SA41]
gi|449259062|gb|EMC56610.1| GTP-binding protein YqeH [Streptococcus mutans M230]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|259503609|ref|ZP_05746511.1| GTP-binding protein [Lactobacillus antri DSM 16041]
gi|259168433|gb|EEW52928.1| GTP-binding protein [Lactobacillus antri DSM 16041]
Length = 372
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + DLI TTS +PGTTL+
Sbjct: 169 DVYVVGVTNVGKSTLINQIIKQ---RTGVQDLI---TTSRFPGTTLD 209
>gi|449883956|ref|ZP_21785426.1| GTP-binding protein YqeH [Streptococcus mutans SA38]
gi|449249416|gb|EMC47546.1| GTP-binding protein YqeH [Streptococcus mutans SA38]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450092066|ref|ZP_21855759.1| GTP-binding protein YqeH [Streptococcus mutans W6]
gi|450150197|ref|ZP_21876491.1| GTP-binding protein YqeH [Streptococcus mutans 14D]
gi|449218759|gb|EMC18758.1| GTP-binding protein YqeH [Streptococcus mutans W6]
gi|449233832|gb|EMC32879.1| GTP-binding protein YqeH [Streptococcus mutans 14D]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450061597|ref|ZP_21843908.1| GTP-binding protein YqeH [Streptococcus mutans NLML5]
gi|449207028|gb|EMC07711.1| GTP-binding protein YqeH [Streptococcus mutans NLML5]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450010364|ref|ZP_21828633.1| GTP-binding protein YqeH [Streptococcus mutans A19]
gi|450023323|ref|ZP_21830536.1| GTP-binding protein YqeH [Streptococcus mutans U138]
gi|450116249|ref|ZP_21864385.1| GTP-binding protein YqeH [Streptococcus mutans ST1]
gi|449190218|gb|EMB91807.1| GTP-binding protein YqeH [Streptococcus mutans A19]
gi|449193636|gb|EMB95015.1| GTP-binding protein YqeH [Streptococcus mutans U138]
gi|449227139|gb|EMC26583.1| GTP-binding protein YqeH [Streptococcus mutans ST1]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449919675|ref|ZP_21798074.1| GTP-binding protein YqeH [Streptococcus mutans 1SM1]
gi|449159247|gb|EMB62607.1| GTP-binding protein YqeH [Streptococcus mutans 1SM1]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|290579863|ref|YP_003484255.1| GTP-binding protein [Streptococcus mutans NN2025]
gi|449971650|ref|ZP_21814481.1| GTP-binding protein YqeH [Streptococcus mutans 2VS1]
gi|450029763|ref|ZP_21832865.1| GTP-binding protein YqeH [Streptococcus mutans G123]
gi|450057387|ref|ZP_21842554.1| GTP-binding protein YqeH [Streptococcus mutans NLML4]
gi|450163520|ref|ZP_21880832.1| GTP-binding protein YqeH [Streptococcus mutans B]
gi|254996762|dbj|BAH87363.1| putative GTP-binding protein [Streptococcus mutans NN2025]
gi|449171756|gb|EMB74404.1| GTP-binding protein YqeH [Streptococcus mutans 2VS1]
gi|449193955|gb|EMB95324.1| GTP-binding protein YqeH [Streptococcus mutans G123]
gi|449205315|gb|EMC06067.1| GTP-binding protein YqeH [Streptococcus mutans NLML4]
gi|449242684|gb|EMC41244.1| GTP-binding protein YqeH [Streptococcus mutans B]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450072630|ref|ZP_21848694.1| GTP-binding protein YqeH [Streptococcus mutans M2A]
gi|449210944|gb|EMC11369.1| GTP-binding protein YqeH [Streptococcus mutans M2A]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450000106|ref|ZP_21824925.1| GTP-binding protein YqeH [Streptococcus mutans N29]
gi|449186162|gb|EMB88005.1| GTP-binding protein YqeH [Streptococcus mutans N29]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449897616|ref|ZP_21790107.1| GTP-binding protein YqeH [Streptococcus mutans R221]
gi|449261150|gb|EMC58634.1| GTP-binding protein YqeH [Streptococcus mutans R221]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|397650376|ref|YP_006490903.1| GTPase YqeH [Streptococcus mutans GS-5]
gi|449893715|ref|ZP_21788892.1| GTP-binding protein YqeH [Streptococcus mutans SF12]
gi|450098940|ref|ZP_21858241.1| GTP-binding protein YqeH [Streptococcus mutans SF1]
gi|392603945|gb|AFM82109.1| GTPase YqeH [Streptococcus mutans GS-5]
gi|449221126|gb|EMC20928.1| GTP-binding protein YqeH [Streptococcus mutans SF1]
gi|449255714|gb|EMC53558.1| GTP-binding protein YqeH [Streptococcus mutans SF12]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|419524131|ref|ZP_14063706.1| GTPase family protein [Streptococcus pneumoniae GA13723]
gi|379556539|gb|EHZ21594.1| GTPase family protein [Streptococcus pneumoniae GA13723]
Length = 196
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 40 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 80
>gi|450067533|ref|ZP_21846692.1| GTP-binding protein YqeH [Streptococcus mutans NLML9]
gi|449207955|gb|EMC08597.1| GTP-binding protein YqeH [Streptococcus mutans NLML9]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449963594|ref|ZP_21810888.1| GTP-binding protein YqeH [Streptococcus mutans 15VF2]
gi|449173369|gb|EMB75946.1| GTP-binding protein YqeH [Streptococcus mutans 15VF2]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450125814|ref|ZP_21867843.1| GTP-binding protein YqeH [Streptococcus mutans U2A]
gi|449232058|gb|EMC31197.1| GTP-binding protein YqeH [Streptococcus mutans U2A]
Length = 368
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449932299|ref|ZP_21802790.1| GTP-binding protein YqeH [Streptococcus mutans 3SN1]
gi|449161478|gb|EMB64664.1| GTP-binding protein YqeH [Streptococcus mutans 3SN1]
Length = 368
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449915664|ref|ZP_21796411.1| GTP-binding protein YqeH [Streptococcus mutans 15JP3]
gi|449156142|gb|EMB59622.1| GTP-binding protein YqeH [Streptococcus mutans 15JP3]
Length = 368
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450052101|ref|ZP_21841149.1| GTP-binding protein YqeH [Streptococcus mutans NFSM1]
gi|449201224|gb|EMC02230.1| GTP-binding protein YqeH [Streptococcus mutans NFSM1]
Length = 368
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449926275|ref|ZP_21800673.1| GTP-binding protein YqeH [Streptococcus mutans 4SM1]
gi|449160747|gb|EMB63989.1| GTP-binding protein YqeH [Streptococcus mutans 4SM1]
Length = 368
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|450137692|ref|ZP_21871776.1| GTP-binding protein YqeH [Streptococcus mutans NLML1]
gi|449234970|gb|EMC33952.1| GTP-binding protein YqeH [Streptococcus mutans NLML1]
Length = 368
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|449997466|ref|ZP_21824018.1| GTP-binding protein YqeH [Streptococcus mutans A9]
gi|449181814|gb|EMB83875.1| GTP-binding protein YqeH [Streptococcus mutans A9]
Length = 368
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|357636021|ref|ZP_09133896.1| ribosome biogenesis GTPase YqeH [Streptococcus macacae NCTC 11558]
gi|357584475|gb|EHJ51678.1| ribosome biogenesis GTPase YqeH [Streptococcus macacae NCTC 11558]
Length = 368
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 21 NIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
++++A DVY+VG TNVGKSTL NA +Q +L K D+I T S +PGTTL+
Sbjct: 152 DLIAAIETFRQGRDVYVVGVTNVGKSTLINAMIQ-ELTGDK--DVI---TASRFPGTTLD 205
>gi|256847505|ref|ZP_05552951.1| ribosome biogenesis GTPase YqeH [Lactobacillus coleohominis
101-4-CHN]
gi|256716169|gb|EEU31144.1| ribosome biogenesis GTPase YqeH [Lactobacillus coleohominis
101-4-CHN]
Length = 375
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + DLI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIKQ---RTGVKDLI---TTSRFPGTTLD 212
>gi|449908951|ref|ZP_21794064.1| GTP-binding protein YqeH [Streptococcus mutans OMZ175]
gi|449262015|gb|EMC59473.1| GTP-binding protein YqeH [Streptococcus mutans OMZ175]
Length = 368
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|418322703|ref|ZP_12934017.1| ribosome biogenesis GTPase YqeH [Staphylococcus pettenkoferi
VCU012]
gi|365231150|gb|EHM72209.1| ribosome biogenesis GTPase YqeH [Staphylococcus pettenkoferi
VCU012]
Length = 368
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKS+L N ++ + D++ TTS +PGTTL+++
Sbjct: 164 DVYIVGTTNVGKSSLINRLIEQ---SVGEKDVV---TTSRFPGTTLDMI 206
>gi|312868748|ref|ZP_07728940.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris PB013-T2-3]
gi|311095734|gb|EFQ53986.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris PB013-T2-3]
Length = 372
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + DLI TTS +PGTTL+
Sbjct: 169 DVYVVGVTNVGKSTLINQIIKQ---RTGVQDLI---TTSRFPGTTLD 209
>gi|156100137|ref|XP_001615796.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804670|gb|EDL46069.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 795
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISR-----ATTSPWPGTTLNL-- 81
L D+Y+VGC NVGKST N+FL+ K D+ SR TTS P TTLN
Sbjct: 483 LEKGTDIYIVGCVNVGKSTFVNSFLKYINYK-HLGDIYSRRKKGGVTTSNIPYTTLNYNT 541
Query: 82 --LKEIIKI 88
LK+ IKI
Sbjct: 542 FQLKKNIKI 550
>gi|417006045|ref|ZP_11944615.1| GTP-binding protein YqeH [Streptococcus agalactiae FSL S3-026]
gi|341576226|gb|EGS26637.1| GTP-binding protein YqeH [Streptococcus agalactiae FSL S3-026]
Length = 372
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 8/48 (16%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ +I S D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIR----EITGSRDVI---TTSRFPGTTLD 205
>gi|449947225|ref|ZP_21807268.1| GTP-binding protein YqeH [Streptococcus mutans 11SSST2]
gi|449168888|gb|EMB71686.1| GTP-binding protein YqeH [Streptococcus mutans 11SSST2]
Length = 368
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|421489789|ref|ZP_15937165.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK1138]
gi|400374377|gb|EJP27296.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK1138]
Length = 368
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDKEI--ITTSRFPGTTLD 205
>gi|410595040|ref|YP_006951767.1| GTP-binding protein, riobosome biogenesis, YqeH [Streptococcus
agalactiae SA20-06]
gi|421532122|ref|ZP_15978491.1| GTPase YqeH [Streptococcus agalactiae STIR-CD-17]
gi|403642630|gb|EJZ03456.1| GTPase YqeH [Streptococcus agalactiae STIR-CD-17]
gi|410518679|gb|AFV72823.1| GTP-binding protein, riobosome biogenesis, YqeH [Streptococcus
agalactiae SA20-06]
Length = 372
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 8/48 (16%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ +I S D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIR----EITGSRDVI---TTSRFPGTTLD 205
>gi|315222440|ref|ZP_07864341.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus F0211]
gi|315188464|gb|EFU22178.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus F0211]
Length = 368
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDKEI--ITTSRFPGTTLD 205
>gi|77408261|ref|ZP_00785004.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|339300938|ref|ZP_08650063.1| GTP-binding protein [Streptococcus agalactiae ATCC 13813]
gi|421148017|ref|ZP_15607689.1| GTPase YqeH [Streptococcus agalactiae GB00112]
gi|77173119|gb|EAO76245.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|319745586|gb|EFV97887.1| GTP-binding protein [Streptococcus agalactiae ATCC 13813]
gi|401685355|gb|EJS81363.1| GTPase YqeH [Streptococcus agalactiae GB00112]
Length = 372
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 8/48 (16%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ +I S D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIR----EITGSRDVI---TTSRFPGTTLD 205
>gi|450121839|ref|ZP_21866478.1| GTP-binding protein YqeH [Streptococcus mutans ST6]
gi|449228725|gb|EMC28079.1| GTP-binding protein YqeH [Streptococcus mutans ST6]
Length = 368
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTLD 205
>gi|77411900|ref|ZP_00788232.1| GTP-binding protein [Streptococcus agalactiae CJB111]
gi|77162060|gb|EAO73039.1| GTP-binding protein [Streptococcus agalactiae CJB111]
Length = 372
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 8/48 (16%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ +I S D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIR----EITGSRDVI---TTSRFPGTTLD 205
>gi|22537804|ref|NP_688655.1| GTP-binding protein YqeH [Streptococcus agalactiae 2603V/R]
gi|76786933|ref|YP_330278.1| GTP-binding protein YqeH [Streptococcus agalactiae A909]
gi|77406588|ref|ZP_00783636.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|406710043|ref|YP_006764769.1| GTP-binding protein YqeH [Streptococcus agalactiae GD201008-001]
gi|424048892|ref|ZP_17786443.1| GTPase YqeH [Streptococcus agalactiae ZQ0910]
gi|22534697|gb|AAN00528.1|AE014267_11 GTP-binding protein [Streptococcus agalactiae 2603V/R]
gi|76561990|gb|ABA44574.1| GTP-binding protein [Streptococcus agalactiae A909]
gi|77174813|gb|EAO77634.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|389649661|gb|EIM71137.1| GTPase YqeH [Streptococcus agalactiae ZQ0910]
gi|406650928|gb|AFS46329.1| GTP-binding protein YqeH [Streptococcus agalactiae GD201008-001]
Length = 372
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 8/48 (16%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ +I S D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIR----EITGSRDVI---TTSRFPGTTLD 205
>gi|417885655|ref|ZP_12529807.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris F0423]
gi|341595151|gb|EGS37826.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris F0423]
Length = 372
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + DLI TTS +PGTTL+
Sbjct: 169 DVYVVGVTNVGKSTLINQIIKQ---RTGVQDLI---TTSRFPGTTLD 209
>gi|25011748|ref|NP_736143.1| GTP-binding protein YqeH [Streptococcus agalactiae NEM316]
gi|77414364|ref|ZP_00790520.1| GTP-binding protein [Streptococcus agalactiae 515]
gi|24413288|emb|CAD47367.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159599|gb|EAO70754.1| GTP-binding protein [Streptococcus agalactiae 515]
Length = 372
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 8/48 (16%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ +I S D+I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIR----EITGSRDVI---TTSRFPGTTLD 205
>gi|419767751|ref|ZP_14293898.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK579]
gi|383352793|gb|EID30426.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK579]
Length = 368
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNI--ITTSRFPGTTLD 205
>gi|418160455|ref|ZP_12797154.1| hypothetical protein SPAR43_1796 [Streptococcus pneumoniae
GA17227]
gi|353822188|gb|EHE02364.1| hypothetical protein SPAR43_1796 [Streptococcus pneumoniae
GA17227]
Length = 243
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 40 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 80
>gi|418108181|ref|ZP_12745218.1| hypothetical protein SPAR70_1728 [Streptococcus pneumoniae
GA41410]
gi|418158051|ref|ZP_12794767.1| hypothetical protein SPAR41_1834 [Streptococcus pneumoniae
GA16833]
gi|353778458|gb|EHD58926.1| hypothetical protein SPAR70_1728 [Streptococcus pneumoniae
GA41410]
gi|353824499|gb|EHE04673.1| hypothetical protein SPAR41_1834 [Streptococcus pneumoniae
GA16833]
Length = 243
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 40 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 80
>gi|330719333|ref|ZP_08313933.1| GTPase YqeH [Leuconostoc fallax KCTC 3537]
Length = 379
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++S + +LI TTS +PGTTL+ ++
Sbjct: 180 DVYVVGVTNVGKSTLINRIIKS---RTGIQELI---TTSRFPGTTLDRIE 223
>gi|404417968|ref|ZP_10999750.1| GTPase YqeH [Staphylococcus arlettae CVD059]
gi|403489684|gb|EJY95247.1| GTPase YqeH [Staphylococcus arlettae CVD059]
Length = 368
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + D + TTS +PGTTL+++
Sbjct: 164 DVYIVGTTNVGKSTLINKLIEQ---SVGEKDTV---TTSRFPGTTLDMI 206
>gi|332524018|ref|ZP_08400270.1| ribosome biogenesis GTPase YqeH [Streptococcus porcinus str.
Jelinkova 176]
gi|332315282|gb|EGJ28267.1| ribosome biogenesis GTPase YqeH [Streptococcus porcinus str.
Jelinkova 176]
Length = 371
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + I TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EISGNKNI--ITTSRFPGTTLD 205
>gi|451980393|ref|ZP_21928788.1| tRNA modification GTPase [Nitrospina gracilis 3/211]
gi|451762433|emb|CCQ90019.1| tRNA modification GTPase [Nitrospina gracilis 3/211]
Length = 458
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 11/56 (19%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+V LVG NVGKS+L NA L+ D RA +P PGTT ++L+E ++I+
Sbjct: 223 NVALVGKPNVGKSSLLNALLKED-----------RAIVTPHPGTTRDVLEERVRIR 267
>gi|336064941|ref|YP_004559800.1| putative GTPase [Streptococcus pasteurianus ATCC 43144]
gi|334283141|dbj|BAK30714.1| putative GTPase [Streptococcus pasteurianus ATCC 43144]
Length = 372
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ + D+I TTS +PGTTL+
Sbjct: 160 LRRGRDVYVVGVTNVGKSTLINAIIKEITGE---KDII---TTSRFPGTTLD 205
>gi|306834207|ref|ZP_07467327.1| ribosome biogenesis GTPase YqeH [Streptococcus bovis ATCC 700338]
gi|304423780|gb|EFM26926.1| ribosome biogenesis GTPase YqeH [Streptococcus bovis ATCC 700338]
Length = 372
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ + D+I TTS +PGTTL+
Sbjct: 160 LRRGRDVYVVGVTNVGKSTLINAIIKEITGE---KDII---TTSRFPGTTLD 205
>gi|336053764|ref|YP_004562051.1| GTP-binding protein [Lactobacillus kefiranofaciens ZW3]
gi|333957141|gb|AEG39949.1| GTP-binding protein [Lactobacillus kefiranofaciens ZW3]
Length = 369
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
S DVY VG TNVGKSTL NA + D+ TTS +PGTTL+
Sbjct: 164 SQDKDVYFVGTTNVGKSTLINAIVD------MMGDIQDLITTSRFPGTTLD 208
>gi|417699129|ref|ZP_12348300.1| hypothetical protein SPAR69_1686 [Streptococcus pneumoniae
GA41317]
gi|421218401|ref|ZP_15675295.1| hypothetical protein AMCSP13_002051 [Streptococcus pneumoniae
2070335]
gi|332199775|gb|EGJ13850.1| hypothetical protein SPAR69_1686 [Streptococcus pneumoniae
GA41317]
gi|395583170|gb|EJG43619.1| hypothetical protein AMCSP13_002051 [Streptococcus pneumoniae
2070335]
Length = 243
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 40 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 80
>gi|126653886|ref|ZP_01725733.1| YqeH [Bacillus sp. B14905]
gi|126589611|gb|EAZ83750.1| YqeH [Bacillus sp. B14905]
Length = 367
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+VY+VGCTNVGKST N ++ +A+ TTS +PGTTL++++
Sbjct: 162 NVYVVGCTNVGKSTFINRIIK------QATGEGEVITTSHFPGTTLDMIE 205
>gi|421245585|ref|ZP_15702083.1| GTP-binding protein [Streptococcus pneumoniae 2081685]
gi|395608112|gb|EJG68208.1| GTP-binding protein [Streptococcus pneumoniae 2081685]
Length = 243
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 40 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 80
>gi|418096859|ref|ZP_12733970.1| hypothetical protein SPAR40_1790 [Streptococcus pneumoniae
GA16531]
gi|353768580|gb|EHD49104.1| hypothetical protein SPAR40_1790 [Streptococcus pneumoniae
GA16531]
Length = 243
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 40 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 80
>gi|374338656|ref|YP_005095373.1| GTP-binding protein YqeH [Streptococcus macedonicus ACA-DC 198]
gi|372284773|emb|CCF03066.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus macedonicus ACA-DC 198]
Length = 372
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ + D+I TTS +PGTTL+
Sbjct: 160 LRRGRDVYVVGVTNVGKSTLINAIIKEITGE---KDII---TTSRFPGTTLD 205
>gi|443631866|ref|ZP_21116046.1| hypothetical protein BSI_11170 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347981|gb|ELS62038.1| hypothetical protein BSI_11170 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 366
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIKE---VSGEEDII---TTSQFPGTTLDAIE 204
>gi|320547439|ref|ZP_08041726.1| GTP-binding protein [Streptococcus equinus ATCC 9812]
gi|320447916|gb|EFW88672.1| GTP-binding protein [Streptococcus equinus ATCC 9812]
Length = 372
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ + D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKEITGE---KDII---TTSRFPGTTLD 205
>gi|398307026|ref|ZP_10510612.1| GTPase YqeH [Bacillus vallismortis DV1-F-3]
Length = 366
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIKE---VSGEEDII---TTSQFPGTTLDAIE 204
>gi|421213686|ref|ZP_15670640.1| hypothetical protein AMCSP12_001572 [Streptococcus pneumoniae
2070108]
gi|395578917|gb|EJG39427.1| hypothetical protein AMCSP12_001572 [Streptococcus pneumoniae
2070108]
Length = 243
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 40 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 80
>gi|289578133|ref|YP_003476760.1| GTP-binding protein Era [Thermoanaerobacter italicus Ab9]
gi|289527846|gb|ADD02198.1| GTP-binding protein Era [Thermoanaerobacter italicus Ab9]
Length = 302
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
AG V L+G TNVGKSTL NA LQ + A TSP P TT N ++ I+
Sbjct: 5 AGFVALIGRTNVGKSTLLNAILQEKI-----------AITSPKPQTTRNTIRGIL 48
>gi|297544408|ref|YP_003676710.1| GTP-binding protein Era [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842183|gb|ADH60699.1| GTP-binding protein Era [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 302
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
AG V L+G TNVGKSTL NA LQ + A TSP P TT N ++ I+
Sbjct: 5 AGFVALIGRTNVGKSTLLNAILQEKI-----------AITSPKPQTTRNTIRGIL 48
>gi|347753133|ref|YP_004860698.1| ribosome biogenesis GTPase YqeH [Bacillus coagulans 36D1]
gi|347585651|gb|AEP01918.1| ribosome biogenesis GTPase YqeH [Bacillus coagulans 36D1]
Length = 368
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+ GCTNVGKST N ++ +A+ TTS +PGTTL+++
Sbjct: 163 DVYVAGCTNVGKSTFINRIIR------QATGEKEVITTSYFPGTTLDMI 205
>gi|288906055|ref|YP_003431277.1| GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|306832095|ref|ZP_07465249.1| ribosome biogenesis GTPase YqeH [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325979020|ref|YP_004288736.1| GTP-binding protein engA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338497|ref|YP_006034666.1| putative GTPase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732781|emb|CBI14355.1| putative conserved GTP-binding protein [Streptococcus gallolyticus
UCN34]
gi|304425534|gb|EFM28652.1| ribosome biogenesis GTPase YqeH [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178948|emb|CBZ48992.1| GTP-binding protein engA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334281133|dbj|BAK28707.1| putative GTPase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 372
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ + D+I TTS +PGTTL+
Sbjct: 160 LRRGRDVYVVGVTNVGKSTLINAIIKEITGE---KDII---TTSRFPGTTLD 205
>gi|169829302|ref|YP_001699460.1| GTP-binding protein YqeH [Lysinibacillus sphaericus C3-41]
gi|168993790|gb|ACA41330.1| Hypothetical yqeH protein [Lysinibacillus sphaericus C3-41]
Length = 367
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+VY+VGCTNVGKST N ++ +A+ TTS +PGTTL++++
Sbjct: 162 NVYVVGCTNVGKSTFINRIIK------QATGEGEVITTSHFPGTTLDMIE 205
>gi|385265566|ref|ZP_10043653.1| hypothetical protein MY7_2332 [Bacillus sp. 5B6]
gi|385150062|gb|EIF13999.1| hypothetical protein MY7_2332 [Bacillus sp. 5B6]
Length = 366
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|345020328|ref|ZP_08783941.1| GTPase YqeH [Ornithinibacillus scapharcae TW25]
Length = 366
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV++VG TNVGKST N ++ I SD+I TTS +PGTTL ++
Sbjct: 161 DVFIVGTTNVGKSTFINRLIKQ---SIGESDVI---TTSYFPGTTLGFIE 204
>gi|429505976|ref|YP_007187160.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|429487566|gb|AFZ91490.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 366
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|149183162|ref|ZP_01861611.1| YqeH [Bacillus sp. SG-1]
gi|148849145|gb|EDL63346.1| YqeH [Bacillus sp. SG-1]
Length = 371
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
VY+VGCTNVGKST N + D+I TTS +PGTTL++++
Sbjct: 167 VYVVGCTNVGKSTFINRVIHH---VTGEKDII---TTSHFPGTTLDMIE 209
>gi|312866371|ref|ZP_07726589.1| ribosome biogenesis GTPase YqeH [Streptococcus downei F0415]
gi|311098065|gb|EFQ56291.1| ribosome biogenesis GTPase YqeH [Streptococcus downei F0415]
Length = 368
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA ++ +I + I TTS +PGTTL+
Sbjct: 160 LRAGRDVYVVGVTNVGKSTLINAIIK----EITGNQEI--ITTSRFPGTTLD 205
>gi|171780310|ref|ZP_02921214.1| hypothetical protein STRINF_02098 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705906|ref|YP_005204365.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
gi|171281658|gb|EDT47093.1| ribosome biogenesis GTPase YqeH [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374682605|gb|AEZ62894.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 372
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ + D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKEITGE---KDII---TTSRFPGTTLD 205
>gi|16079621|ref|NP_390445.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
168]
gi|221310492|ref|ZP_03592339.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
168]
gi|221314816|ref|ZP_03596621.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319738|ref|ZP_03601032.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324016|ref|ZP_03605310.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SMY]
gi|418032254|ref|ZP_12670737.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428280060|ref|YP_005561795.1| GTP-binding protein YqeH [Bacillus subtilis subsp. natto BEST195]
gi|430756354|ref|YP_007208893.1| hypothetical protein A7A1_0862 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449095062|ref|YP_007427553.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452915399|ref|ZP_21964025.1| ribosome biogenesis GTPase YqeH [Bacillus subtilis MB73/2]
gi|1730981|sp|P54453.1|YQEH_BACSU RecName: Full=Uncharacterized protein YqeH
gi|1303788|dbj|BAA12444.1| YqeH [Bacillus subtilis]
gi|2635013|emb|CAB14509.1| GTPase involved in ribosome 30S assembly [Bacillus subtilis subsp.
subtilis str. 168]
gi|291485017|dbj|BAI86092.1| GTP-binding protein YqeH [Bacillus subtilis subsp. natto BEST195]
gi|351471117|gb|EHA31238.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959815|dbj|BAM53055.1| GTP-binding protein YqeH [Bacillus subtilis BEST7613]
gi|407965390|dbj|BAM58629.1| GTP-binding protein YqeH [Bacillus subtilis BEST7003]
gi|430020874|gb|AGA21480.1| Hypothetical protein YqeH [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449028977|gb|AGE64216.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452115747|gb|EME06143.1| ribosome biogenesis GTPase YqeH [Bacillus subtilis MB73/2]
Length = 366
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIKE---VSGEEDII---TTSQFPGTTLDAIE 204
>gi|384176191|ref|YP_005557576.1| YqeH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349595415|gb|AEP91602.1| YqeH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 366
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIKE---VSGEEDII---TTSQFPGTTLDAIE 204
>gi|321312052|ref|YP_004204339.1| GTPase YqeH [Bacillus subtilis BSn5]
gi|320018326|gb|ADV93312.1| GTPase YqeH [Bacillus subtilis BSn5]
Length = 366
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIKE---VSGEEDII---TTSQFPGTTLDAIE 204
>gi|308174356|ref|YP_003921061.1| GTPase [Bacillus amyloliquefaciens DSM 7]
gi|307607220|emb|CBI43591.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens DSM 7]
Length = 366
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|386759166|ref|YP_006232382.1| hypothetical protein MY9_2593 [Bacillus sp. JS]
gi|384932448|gb|AFI29126.1| hypothetical protein MY9_2593 [Bacillus sp. JS]
Length = 366
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIKE---VSGEEDII---TTSQFPGTTLDAIE 204
>gi|387899200|ref|YP_006329496.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|387173310|gb|AFJ62771.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
Length = 371
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 166 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 209
>gi|375363100|ref|YP_005131139.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451346227|ref|YP_007444858.1| GTPase YqeH [Bacillus amyloliquefaciens IT-45]
gi|452856330|ref|YP_007498013.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|371569094|emb|CCF05944.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449849985|gb|AGF26977.1| GTPase YqeH [Bacillus amyloliquefaciens IT-45]
gi|452080590|emb|CCP22353.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 366
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|227877772|ref|ZP_03995805.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256843623|ref|ZP_05549111.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 125-2-CHN]
gi|256850099|ref|ZP_05555529.1| GTP-binding protein YqeH [Lactobacillus crispatus MV-1A-US]
gi|262047387|ref|ZP_06020344.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus MV-3A-US]
gi|293380732|ref|ZP_06626780.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 214-1]
gi|423319186|ref|ZP_17297062.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB049-03]
gi|423320732|ref|ZP_17298604.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB077-07]
gi|227862631|gb|EEJ70117.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256615043|gb|EEU20244.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 125-2-CHN]
gi|256713071|gb|EEU28062.1| GTP-binding protein YqeH [Lactobacillus crispatus MV-1A-US]
gi|260572361|gb|EEX28924.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus MV-3A-US]
gi|290922696|gb|EFD99650.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 214-1]
gi|405589995|gb|EKB63534.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB049-03]
gi|405600001|gb|EKB73174.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB077-07]
Length = 369
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 18/86 (20%)
Query: 1 MELWPALEGREVILV-ARPEPNIVSADLVL-----SSAGDVYLVGCTNVGKSTLFNAFLQ 54
M L+P +E+ LV A+ + N+ DL+ S DVY VG TNVGKSTL NA +
Sbjct: 135 MGLYP----KEIFLVSAKKKLNL--EDLIAYINKQSQDKDVYFVGTTNVGKSTLINAIID 188
Query: 55 SDLCKIKASDLISRATTSPWPGTTLN 80
D+ T S +PGTTL+
Sbjct: 189 M------MGDIQDLITASRFPGTTLD 208
>gi|189218144|ref|YP_001938786.1| tRNA modification GTPase, TrmE [Methylacidiphilum infernorum V4]
gi|189185002|gb|ACD82187.1| tRNA modification GTPase, TrmE [Methylacidiphilum infernorum V4]
Length = 441
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
VL + L G NVGKS+LFNA L+ + RA SP PGTT + ++ +
Sbjct: 210 VLREGLTIVLAGSPNVGKSSLFNALLKEN-----------RAIVSPHPGTTRDTIEAECR 258
Query: 88 IQT--VCKVKELGKKILLSQVKGKNMSKTEK 116
I + V V G+++ Q++ + + + ++
Sbjct: 259 ISSFLVKIVDTAGQRVADDQIEAEGIRRAQE 289
>gi|450131395|ref|ZP_21869464.1| GTP-binding protein YqeH [Streptococcus mutans NLML8]
gi|449153855|gb|EMB57487.1| GTP-binding protein YqeH [Streptococcus mutans NLML8]
Length = 368
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
L DVY+VG TNVGKSTL NA +Q +I I TTS +PGTTL
Sbjct: 160 LRQGRDVYVVGVTNVGKSTLINAIIQ----EITGDKNI--ITTSRFPGTTL 204
>gi|418165043|ref|ZP_12801711.1| GTPase family protein [Streptococcus pneumoniae GA17371]
gi|353828875|gb|EHE09011.1| GTPase family protein [Streptococcus pneumoniae GA17371]
Length = 336
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 133 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 173
>gi|421730914|ref|ZP_16170040.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407075068|gb|EKE48055.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 366
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|384266179|ref|YP_005421886.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380499532|emb|CCG50570.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 366
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|384160215|ref|YP_005542288.1| GTPase YqeH [Bacillus amyloliquefaciens TA208]
gi|384165144|ref|YP_005546523.1| ribosome 30S assembly GTPase [Bacillus amyloliquefaciens LL3]
gi|384169285|ref|YP_005550663.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328554303|gb|AEB24795.1| GTPase YqeH [Bacillus amyloliquefaciens TA208]
gi|328912699|gb|AEB64295.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens LL3]
gi|341828564|gb|AEK89815.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
Length = 366
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|333397000|ref|ZP_08478813.1| GTPase YqeH [Leuconostoc gelidum KCTC 3527]
gi|406600387|ref|YP_006745733.1| GTPase YqeH [Leuconostoc gelidum JB7]
gi|406371922|gb|AFS40847.1| GTPase YqeH [Leuconostoc gelidum JB7]
Length = 382
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++S DLI TTS +PGTTL+ ++
Sbjct: 181 DVYVVGVTNVGKSTLINQIIKSG---TGVQDLI---TTSRFPGTTLDRIE 224
>gi|296111265|ref|YP_003621647.1| hypothetical protein LKI_05685 [Leuconostoc kimchii IMSNU 11154]
gi|339491463|ref|YP_004705968.1| GTPase YqeH [Leuconostoc sp. C2]
gi|295832797|gb|ADG40678.1| hypothetical protein LKI_05685 [Leuconostoc kimchii IMSNU 11154]
gi|338853135|gb|AEJ31345.1| GTPase YqeH [Leuconostoc sp. C2]
Length = 380
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 17 RPE--PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPW 74
RP+ N++ DVY+VG TNVGKSTL N +++ DLI TTS +
Sbjct: 161 RPQNLDNLLDTIDYFREGRDVYVVGVTNVGKSTLINQIIKA---GTGVQDLI---TTSRF 214
Query: 75 PGTTLNLLK 83
PGTTL+ ++
Sbjct: 215 PGTTLDRIE 223
>gi|356503413|ref|XP_003520504.1| PREDICTED: uncharacterized protein yqeH-like [Glycine max]
Length = 635
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NAF + K +++ T +P PGTTL +L+
Sbjct: 365 GNVWVIGAQNAGKSTLINAFAKKQGAK------VTKLTEAPIPGTTLGILR 409
>gi|418963084|ref|ZP_13514926.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383343950|gb|EID22121.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 368
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDKEV--ITTSRFPGTTLD 205
>gi|46445656|ref|YP_007021.1| tRNA modification GTPase TrmE [Candidatus Protochlamydia
amoebophila UWE25]
gi|81829092|sp|Q6MFA3.1|MNME_PARUW RecName: Full=tRNA modification GTPase MnmE
gi|46399297|emb|CAF22746.1| probable GTP-binding protein in thiophene and furan oxidation
[Candidatus Protochlamydia amoebophila UWE25]
Length = 458
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 11/61 (18%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
+L + L+GC NVGKS+L NA L D RA SP PGTT ++L++ ++
Sbjct: 221 ILHDGLSICLIGCPNVGKSSLMNALLDKD-----------RAIVSPIPGTTRDVLEDHLR 269
Query: 88 I 88
+
Sbjct: 270 L 270
>gi|418126403|ref|ZP_12763308.1| hypothetical protein SPAR86_1773 [Streptococcus pneumoniae GA44511]
gi|353795467|gb|EHD75815.1| hypothetical protein SPAR86_1773 [Streptococcus pneumoniae GA44511]
Length = 336
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 133 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 173
>gi|328957108|ref|YP_004374494.1| GTP-binding protein YqeH [Carnobacterium sp. 17-4]
gi|328673432|gb|AEB29478.1| GTP-binding protein YqeH [Carnobacterium sp. 17-4]
Length = 377
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV++VG TNVGKSTL N ++S DLI TTS +PGTTL+ ++
Sbjct: 173 DVFVVGVTNVGKSTLINQIIKS---TAGVQDLI---TTSQFPGTTLDRIE 216
>gi|154686827|ref|YP_001421988.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens FZB42]
gi|154352678|gb|ABS74757.1| YqeH [Bacillus amyloliquefaciens FZB42]
Length = 366
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|394992033|ref|ZP_10384826.1| GTPase YqeH [Bacillus sp. 916]
gi|393807049|gb|EJD68375.1| GTPase YqeH [Bacillus sp. 916]
Length = 366
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|366089348|ref|ZP_09455821.1| GTPase YqeH [Lactobacillus acidipiscis KCTC 13900]
Length = 374
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ DLI TTS +PGTTL+
Sbjct: 169 DVYVVGVTNVGKSTLINQIIKR---STGMQDLI---TTSSFPGTTLD 209
>gi|418183293|ref|ZP_12819850.1| GTPase family protein [Streptococcus pneumoniae GA43380]
gi|353847722|gb|EHE27742.1| GTPase family protein [Streptococcus pneumoniae GA43380]
Length = 293
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 90 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 130
>gi|228477071|ref|ZP_04061709.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius SK126]
gi|228251090|gb|EEK10261.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius SK126]
Length = 372
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKSRDVYVVGVTNVGKSTLINAIIKE---ITGDKDII---TTSRFPGTTLD 205
>gi|377556235|ref|ZP_09785950.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gastricus PS3]
gi|376168658|gb|EHS87406.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gastricus PS3]
Length = 372
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + DLI TTS +PGTTL+
Sbjct: 169 DVYVVGVTNVGKSTLINQIIK---LRTGIKDLI---TTSRFPGTTLD 209
>gi|335031074|ref|ZP_08524532.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK52 = DSM
20563]
gi|333770542|gb|EGL47570.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK52 = DSM
20563]
Length = 368
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDKEV--ITTSRFPGTTLD 205
>gi|149002055|ref|ZP_01827009.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
gi|147759864|gb|EDK66854.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
Length = 336
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 133 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 173
>gi|410460447|ref|ZP_11314125.1| GTPase YqeH [Bacillus azotoformans LMG 9581]
gi|409927062|gb|EKN64208.1| GTPase YqeH [Bacillus azotoformans LMG 9581]
Length = 369
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 5/49 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
+VY+VGCTNVGKST N ++ + + D+I TTS +PGTTL+L+
Sbjct: 163 NVYVVGCTNVGKSTFINKIIK-EFSGV-TDDVI---TTSQFPGTTLDLI 206
>gi|358464171|ref|ZP_09174137.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 058
str. F0407]
gi|357067199|gb|EHI77325.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 058
str. F0407]
Length = 368
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|299535723|ref|ZP_07049044.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZC1]
gi|298728923|gb|EFI69477.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZC1]
Length = 367
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
+VY+VGCTNVGKST N ++ +A+ TTS +PGTTL+++
Sbjct: 162 NVYVVGCTNVGKSTFINRIIK------QATGEGEVITTSHFPGTTLDMI 204
>gi|296333274|ref|ZP_06875727.1| GTP-binding protein YqeH [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675222|ref|YP_003866894.1| ribosome 30S assembly GTPase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296149472|gb|EFG90368.1| GTP-binding protein YqeH [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413466|gb|ADM38585.1| GTPase involved in ribosome 30S assembly [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 366
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRVIKE---VSGEEDII---TTSQFPGTTLDAIE 204
>gi|385260249|ref|ZP_10038398.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK140]
gi|385192169|gb|EIF39579.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK140]
Length = 368
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|417940627|ref|ZP_12583915.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK313]
gi|343389508|gb|EGV02093.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK313]
Length = 336
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 133 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 173
>gi|309798779|ref|ZP_07693043.1| GTP-binding protein [Streptococcus infantis SK1302]
gi|308117596|gb|EFO55008.1| GTP-binding protein [Streptococcus infantis SK1302]
Length = 368
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|424739106|ref|ZP_18167528.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZB2]
gi|422946971|gb|EKU41373.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZB2]
Length = 367
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
+VY+VGCTNVGKST N ++ +A+ TTS +PGTTL+++
Sbjct: 162 NVYVVGCTNVGKSTFINRIIK------QATGEGEVITTSHFPGTTLDMI 204
>gi|417849907|ref|ZP_12495822.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1080]
gi|339455240|gb|EGP67847.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1080]
Length = 368
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|335029055|ref|ZP_08522567.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK1076]
gi|334269456|gb|EGL87873.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK1076]
Length = 368
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|311069170|ref|YP_003974093.1| GTP-binding protein YqeH [Bacillus atrophaeus 1942]
gi|419820180|ref|ZP_14343793.1| GTPase YqeH [Bacillus atrophaeus C89]
gi|310869687|gb|ADP33162.1| GTP-binding protein YqeH [Bacillus atrophaeus 1942]
gi|388475692|gb|EIM12402.1| GTPase YqeH [Bacillus atrophaeus C89]
Length = 366
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ ++ + I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRIIK----EVSGEENI--ITTSQFPGTTLDAIE 204
>gi|345017418|ref|YP_004819771.1| GTP-binding protein Era-like-protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032761|gb|AEM78487.1| GTP-binding protein Era-like-protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 302
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
AG V LVG TNVGKSTL NA LQ + A TSP P TT N + I+
Sbjct: 3 HKAGFVALVGRTNVGKSTLLNAILQEKI-----------AITSPKPQTTRNTIHGIL 48
>gi|418146990|ref|ZP_12783768.1| GTPase family protein [Streptococcus pneumoniae GA13637]
gi|353812565|gb|EHD92800.1| GTPase family protein [Streptococcus pneumoniae GA13637]
Length = 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|326389849|ref|ZP_08211413.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus JW 200]
gi|325994117|gb|EGD52545.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus JW 200]
Length = 302
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
AG V LVG TNVGKSTL NA LQ + A TSP P TT N + I+
Sbjct: 3 HKAGFVALVGRTNVGKSTLLNAILQEKI-----------AITSPKPQTTRNTIHGIL 48
>gi|295398703|ref|ZP_06808725.1| ribosome biogenesis GTPase YqeH [Aerococcus viridans ATCC 11563]
gi|294973056|gb|EFG48861.1| ribosome biogenesis GTPase YqeH [Aerococcus viridans ATCC 11563]
Length = 375
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
+ DVY++G NVGKS+L N LQ+ + +D+I TTS +PGTTL+L+
Sbjct: 163 MRDGRDVYVIGMANVGKSSLINRILQATGVE---ADVI---TTSQFPGTTLDLI 210
>gi|225861571|ref|YP_002743080.1| GTP-binding protein YqeH [Streptococcus pneumoniae Taiwan19F-14]
gi|298230643|ref|ZP_06964324.1| GTP-binding protein YqeH [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254887|ref|ZP_06978473.1| GTP-binding protein YqeH [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503494|ref|YP_003725434.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|387788790|ref|YP_006253858.1| GTP-binding protein YqeH [Streptococcus pneumoniae ST556]
gi|417313225|ref|ZP_12099937.1| GTPase family protein [Streptococcus pneumoniae GA04375]
gi|417696913|ref|ZP_12346091.1| GTPase family protein [Streptococcus pneumoniae GA47368]
gi|418083554|ref|ZP_12720751.1| hypothetical protein SPAR81_1644 [Streptococcus pneumoniae GA44288]
gi|418085738|ref|ZP_12722917.1| hypothetical protein SPAR90_1643 [Streptococcus pneumoniae GA47281]
gi|418092354|ref|ZP_12729494.1| hypothetical protein SPAR84_1728 [Streptococcus pneumoniae GA44452]
gi|418094540|ref|ZP_12731667.1| hypothetical protein SPAR110_1668 [Streptococcus pneumoniae
GA49138]
gi|418101207|ref|ZP_12738290.1| hypothetical protein SPAR128_1626 [Streptococcus pneumoniae
7286-06]
gi|418110719|ref|ZP_12747738.1| hypothetical protein SPAR113_1792 [Streptococcus pneumoniae
GA49447]
gi|418119198|ref|ZP_12756155.1| hypothetical protein SPAR54_1239 [Streptococcus pneumoniae GA18523]
gi|418142264|ref|ZP_12779076.1| GTPase family protein [Streptococcus pneumoniae GA13455]
gi|418151253|ref|ZP_12787999.1| GTPase family protein [Streptococcus pneumoniae GA14798]
gi|418153491|ref|ZP_12790229.1| GTPase family protein [Streptococcus pneumoniae GA16121]
gi|418169850|ref|ZP_12806491.1| GTPase family protein [Streptococcus pneumoniae GA19077]
gi|418171883|ref|ZP_12808507.1| GTPase family protein [Streptococcus pneumoniae GA19451]
gi|418196404|ref|ZP_12832880.1| GTPase family protein [Streptococcus pneumoniae GA47688]
gi|418198573|ref|ZP_12835031.1| GTPase family protein [Streptococcus pneumoniae GA47778]
gi|418221782|ref|ZP_12848435.1| hypothetical protein SPAR104_1715 [Streptococcus pneumoniae
GA47751]
gi|418223946|ref|ZP_12850586.1| hypothetical protein SPAR127_1647 [Streptococcus pneumoniae
5185-06]
gi|419423654|ref|ZP_13963867.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43264]
gi|419425687|ref|ZP_13965883.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7533-05]
gi|419427799|ref|ZP_13967980.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 5652-06]
gi|419429945|ref|ZP_13970109.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA11856]
gi|419436543|ref|ZP_13976630.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 8190-05]
gi|419438785|ref|ZP_13978853.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13499]
gi|419445250|ref|ZP_13985265.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19923]
gi|419447406|ref|ZP_13987411.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7879-04]
gi|419449531|ref|ZP_13989527.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 4075-00]
gi|419450874|ref|ZP_13990860.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP02]
gi|419489279|ref|ZP_14029028.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44386]
gi|419502399|ref|ZP_14042083.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47628]
gi|419519457|ref|ZP_14059063.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA08825]
gi|419528086|ref|ZP_14067629.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17719]
gi|421273405|ref|ZP_15724245.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR55]
gi|421288015|ref|ZP_15738778.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58771]
gi|225726735|gb|ACO22586.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298239089|gb|ADI70220.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|327389933|gb|EGE88278.1| GTPase family protein [Streptococcus pneumoniae GA04375]
gi|332200311|gb|EGJ14384.1| GTPase family protein [Streptococcus pneumoniae GA47368]
gi|353754774|gb|EHD35386.1| hypothetical protein SPAR81_1644 [Streptococcus pneumoniae GA44288]
gi|353756447|gb|EHD37048.1| hypothetical protein SPAR90_1643 [Streptococcus pneumoniae GA47281]
gi|353763054|gb|EHD43611.1| hypothetical protein SPAR84_1728 [Streptococcus pneumoniae GA44452]
gi|353765036|gb|EHD45584.1| hypothetical protein SPAR110_1668 [Streptococcus pneumoniae
GA49138]
gi|353770707|gb|EHD51219.1| hypothetical protein SPAR128_1626 [Streptococcus pneumoniae
7286-06]
gi|353781340|gb|EHD61785.1| hypothetical protein SPAR113_1792 [Streptococcus pneumoniae
GA49447]
gi|353791150|gb|EHD71531.1| hypothetical protein SPAR54_1239 [Streptococcus pneumoniae GA18523]
gi|353804497|gb|EHD84778.1| GTPase family protein [Streptococcus pneumoniae GA13455]
gi|353814463|gb|EHD94689.1| GTPase family protein [Streptococcus pneumoniae GA14798]
gi|353817042|gb|EHD97250.1| GTPase family protein [Streptococcus pneumoniae GA16121]
gi|353833829|gb|EHE13937.1| GTPase family protein [Streptococcus pneumoniae GA19077]
gi|353835620|gb|EHE15714.1| GTPase family protein [Streptococcus pneumoniae GA19451]
gi|353860415|gb|EHE40360.1| GTPase family protein [Streptococcus pneumoniae GA47688]
gi|353861683|gb|EHE41618.1| GTPase family protein [Streptococcus pneumoniae GA47778]
gi|353875092|gb|EHE54946.1| hypothetical protein SPAR104_1715 [Streptococcus pneumoniae
GA47751]
gi|353878744|gb|EHE58574.1| hypothetical protein SPAR127_1647 [Streptococcus pneumoniae
5185-06]
gi|379138532|gb|AFC95323.1| GTP-binding protein YqeH [Streptococcus pneumoniae ST556]
gi|379537192|gb|EHZ02377.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13499]
gi|379550123|gb|EHZ15225.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA11856]
gi|379566239|gb|EHZ31230.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17719]
gi|379572943|gb|EHZ37900.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19923]
gi|379586226|gb|EHZ51080.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43264]
gi|379586821|gb|EHZ51671.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44386]
gi|379600612|gb|EHZ65393.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47628]
gi|379612982|gb|EHZ77697.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 8190-05]
gi|379614946|gb|EHZ79656.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7879-04]
gi|379617992|gb|EHZ82672.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 5652-06]
gi|379619148|gb|EHZ83822.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7533-05]
gi|379622149|gb|EHZ86785.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 4075-00]
gi|379622579|gb|EHZ87213.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP02]
gi|379641294|gb|EIA05832.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA08825]
gi|395873836|gb|EJG84926.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR55]
gi|395886578|gb|EJG97594.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58771]
Length = 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|427440016|ref|ZP_18924545.1| ribosome biogenesis GTPase YqeH [Pediococcus lolii NGRI 0510Q]
gi|425787848|dbj|GAC45333.1| ribosome biogenesis GTPase YqeH [Pediococcus lolii NGRI 0510Q]
Length = 322
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N+ + + D+I TTS +PGTTL+ ++
Sbjct: 115 LRDGRDVYVVGVTNVGKSTLINSLIA---LRNGIKDVI---TTSRFPGTTLDRIE 163
>gi|418976181|ref|ZP_13524067.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK575]
gi|383351855|gb|EID29618.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK575]
Length = 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|421487827|ref|ZP_15935225.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK304]
gi|400369789|gb|EJP22786.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK304]
Length = 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|419443162|ref|ZP_13983188.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13224]
gi|379550627|gb|EHZ15724.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13224]
Length = 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|326693253|ref|ZP_08230258.1| GTPase YqeH [Leuconostoc argentinum KCTC 3773]
Length = 379
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 11 EVILVARPEPNIVSADLV----LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLI 66
++ L + P + A L L + DV++VG TNVGKSTL N +++ DLI
Sbjct: 153 DIFLTSATHPQNLDALLAEIDELRAGRDVFVVGVTNVGKSTLINQIIKT---STGVKDLI 209
Query: 67 SRATTSPWPGTTLNLLK 83
TTS +PGTTL+ ++
Sbjct: 210 ---TTSRFPGTTLDRIE 223
>gi|270293291|ref|ZP_06199500.1| GTP-binding protein [Streptococcus sp. M143]
gi|270278140|gb|EFA23988.1| GTP-binding protein [Streptococcus sp. M143]
Length = 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|148984192|ref|ZP_01817487.1| GTP-binding protein [Streptococcus pneumoniae SP3-BS71]
gi|149006583|ref|ZP_01830282.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|169833423|ref|YP_001695124.1| GTP-binding protein YqeH [Streptococcus pneumoniae Hungary19A-6]
gi|182684693|ref|YP_001836440.1| GTP-binding protein YqeH [Streptococcus pneumoniae CGSP14]
gi|237649161|ref|ZP_04523413.1| GTP-binding protein YqeH [Streptococcus pneumoniae CCRI 1974]
gi|237820723|ref|ZP_04596568.1| GTP-binding protein YqeH [Streptococcus pneumoniae CCRI 1974M2]
gi|387757963|ref|YP_006064942.1| GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|417677481|ref|ZP_12326888.1| GTPase family protein [Streptococcus pneumoniae GA17545]
gi|418113094|ref|ZP_12750094.1| hypothetical protein SPAR72_1797 [Streptococcus pneumoniae GA41538]
gi|418144919|ref|ZP_12781713.1| GTPase family protein [Streptococcus pneumoniae GA13494]
gi|418155739|ref|ZP_12792466.1| GTPase family protein [Streptococcus pneumoniae GA16242]
gi|418226137|ref|ZP_12852765.1| hypothetical protein SPAR141_1670 [Streptococcus pneumoniae NP112]
gi|418232747|ref|ZP_12859333.1| hypothetical protein SPAR13_1657 [Streptococcus pneumoniae GA07228]
gi|418237202|ref|ZP_12863768.1| hypothetical protein SPAR59_1756 [Streptococcus pneumoniae GA19690]
gi|419458338|ref|ZP_13998280.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02254]
gi|419467366|ref|ZP_14007247.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05248]
gi|419495933|ref|ZP_14035650.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47461]
gi|419513145|ref|ZP_14052777.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05578]
gi|419517352|ref|ZP_14056968.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02506]
gi|421234637|ref|ZP_15691255.1| putative GTP-binding protein [Streptococcus pneumoniae 2061617]
gi|421249979|ref|ZP_15706436.1| GTP-binding protein [Streptococcus pneumoniae 2082239]
gi|421283892|ref|ZP_15734678.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04216]
gi|421299211|ref|ZP_15749898.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60080]
gi|421302784|ref|ZP_15753448.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17484]
gi|147761881|gb|EDK68844.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|147923481|gb|EDK74594.1| GTP-binding protein [Streptococcus pneumoniae SP3-BS71]
gi|168995925|gb|ACA36537.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6]
gi|182630027|gb|ACB90975.1| GTP-binding protein [Streptococcus pneumoniae CGSP14]
gi|301800552|emb|CBW33192.1| GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|332072922|gb|EGI83403.1| GTPase family protein [Streptococcus pneumoniae GA17545]
gi|353783456|gb|EHD63885.1| hypothetical protein SPAR72_1797 [Streptococcus pneumoniae GA41538]
gi|353805212|gb|EHD85487.1| GTPase family protein [Streptococcus pneumoniae GA13494]
gi|353819988|gb|EHE00177.1| GTPase family protein [Streptococcus pneumoniae GA16242]
gi|353881334|gb|EHE61148.1| hypothetical protein SPAR141_1670 [Streptococcus pneumoniae NP112]
gi|353886060|gb|EHE65844.1| hypothetical protein SPAR13_1657 [Streptococcus pneumoniae GA07228]
gi|353891640|gb|EHE71394.1| hypothetical protein SPAR59_1756 [Streptococcus pneumoniae GA19690]
gi|379530002|gb|EHY95243.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02254]
gi|379543113|gb|EHZ08265.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05248]
gi|379594019|gb|EHZ58830.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47461]
gi|379634310|gb|EHZ98875.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05578]
gi|379639425|gb|EIA03969.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02506]
gi|395600491|gb|EJG60648.1| putative GTP-binding protein [Streptococcus pneumoniae 2061617]
gi|395613673|gb|EJG73701.1| GTP-binding protein [Streptococcus pneumoniae 2082239]
gi|395880578|gb|EJG91630.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04216]
gi|395900682|gb|EJH11620.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60080]
gi|395901406|gb|EJH12342.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17484]
gi|429319928|emb|CCP33247.1| GTP-binding protein [Streptococcus pneumoniae SPN034183]
gi|429321745|emb|CCP35221.1| GTP-binding protein [Streptococcus pneumoniae SPN994039]
gi|429323565|emb|CCP31262.1| GTP-binding protein [Streptococcus pneumoniae SPN994038]
Length = 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|418018489|ref|ZP_12658045.1| putative GTPase YqeH [Streptococcus salivarius M18]
gi|345527338|gb|EGX30649.1| putative GTPase YqeH [Streptococcus salivarius M18]
Length = 372
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDII---TTSRFPGTTLD 205
>gi|342164515|ref|YP_004769154.1| GTPase YqeH [Streptococcus pseudopneumoniae IS7493]
gi|341934397|gb|AEL11294.1| GTPase YqeH [Streptococcus pseudopneumoniae IS7493]
Length = 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|221232484|ref|YP_002511637.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|415700216|ref|ZP_11457930.1| hypothetical protein CGSSp4595_1737 [Streptococcus pneumoniae
459-5]
gi|415750139|ref|ZP_11478083.1| hypothetical protein CGSSpSV35_1840 [Streptococcus pneumoniae SV35]
gi|415752954|ref|ZP_11479936.1| hypothetical protein CGSSpSV36_1553 [Streptococcus pneumoniae SV36]
gi|418079179|ref|ZP_12716401.1| hypothetical protein SPAR123_1626 [Streptococcus pneumoniae
4027-06]
gi|418081377|ref|ZP_12718587.1| hypothetical protein SPAR121_1674 [Streptococcus pneumoniae
6735-05]
gi|418124079|ref|ZP_12761010.1| hypothetical protein SPAR82_1748 [Streptococcus pneumoniae GA44378]
gi|418128623|ref|ZP_12765516.1| hypothetical protein SPAR144_1703 [Streptococcus pneumoniae NP170]
gi|418137820|ref|ZP_12774658.1| GTPase family protein [Streptococcus pneumoniae GA11663]
gi|418178799|ref|ZP_12815382.1| GTPase family protein [Streptococcus pneumoniae GA41565]
gi|419473808|ref|ZP_14013657.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13430]
gi|220674945|emb|CAR69522.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|353746706|gb|EHD27366.1| hypothetical protein SPAR123_1626 [Streptococcus pneumoniae
4027-06]
gi|353752116|gb|EHD32747.1| hypothetical protein SPAR121_1674 [Streptococcus pneumoniae
6735-05]
gi|353795899|gb|EHD76245.1| hypothetical protein SPAR82_1748 [Streptococcus pneumoniae GA44378]
gi|353799122|gb|EHD79445.1| hypothetical protein SPAR144_1703 [Streptococcus pneumoniae NP170]
gi|353842858|gb|EHE22904.1| GTPase family protein [Streptococcus pneumoniae GA41565]
gi|353900775|gb|EHE76326.1| GTPase family protein [Streptococcus pneumoniae GA11663]
gi|379550972|gb|EHZ16068.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13430]
gi|381308601|gb|EIC49444.1| hypothetical protein CGSSpSV36_1553 [Streptococcus pneumoniae SV36]
gi|381314912|gb|EIC55678.1| hypothetical protein CGSSp4595_1737 [Streptococcus pneumoniae
459-5]
gi|381318433|gb|EIC59158.1| hypothetical protein CGSSpSV35_1840 [Streptococcus pneumoniae SV35]
Length = 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|350266771|ref|YP_004878078.1| hypothetical protein GYO_2837 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599658|gb|AEP87446.1| YqeH [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 366
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VGCTNVGKST N ++ D+I TTS +PGTTL+ ++
Sbjct: 161 DVYVVGCTNVGKSTFINRVIKE---VSGEEDII---TTSQFPGTTLDAIE 204
>gi|15901581|ref|NP_346185.1| GTP-binding protein YqeH [Streptococcus pneumoniae TIGR4]
gi|111657472|ref|ZP_01408219.1| hypothetical protein SpneT_02001323 [Streptococcus pneumoniae
TIGR4]
gi|149011381|ref|ZP_01832628.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|149020832|ref|ZP_01835361.1| GTP-binding protein [Streptococcus pneumoniae SP23-BS72]
gi|168483288|ref|ZP_02708240.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|168488531|ref|ZP_02712730.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|168491368|ref|ZP_02715511.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|194396922|ref|YP_002038359.1| GTP-binding protein YqeH [Streptococcus pneumoniae G54]
gi|303254361|ref|ZP_07340469.1| GTP-binding protein YqeH [Streptococcus pneumoniae BS455]
gi|303258686|ref|ZP_07344666.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|303261849|ref|ZP_07347795.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|303263712|ref|ZP_07349634.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|303266652|ref|ZP_07352536.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|303268542|ref|ZP_07354335.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|307127963|ref|YP_003879994.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|387759860|ref|YP_006066838.1| GTP-binding protein [Streptococcus pneumoniae INV200]
gi|410477116|ref|YP_006743875.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|417679716|ref|ZP_12329112.1| GTPase family protein [Streptococcus pneumoniae GA17570]
gi|417687199|ref|ZP_12336473.1| GTPase family protein [Streptococcus pneumoniae GA41301]
gi|418087420|ref|ZP_12724589.1| hypothetical protein SPAR87_1205 [Streptococcus pneumoniae GA47033]
gi|418103440|ref|ZP_12740512.1| hypothetical protein SPAR143_1719 [Streptococcus pneumoniae NP070]
gi|418121805|ref|ZP_12758748.1| hypothetical protein SPAR80_1676 [Streptococcus pneumoniae GA44194]
gi|418130897|ref|ZP_12767780.1| hypothetical protein SPAR14_1696 [Streptococcus pneumoniae GA07643]
gi|418133209|ref|ZP_12770079.1| hypothetical protein SPAR22_1792 [Streptococcus pneumoniae GA11304]
gi|418140074|ref|ZP_12776899.1| hypothetical protein SPAR28_1713 [Streptococcus pneumoniae GA13338]
gi|418162793|ref|ZP_12799474.1| GTPase family protein [Streptococcus pneumoniae GA17328]
gi|418176539|ref|ZP_12813130.1| GTPase family protein [Streptococcus pneumoniae GA41437]
gi|418181104|ref|ZP_12817673.1| GTPase family protein [Streptococcus pneumoniae GA41688]
gi|418187727|ref|ZP_12824250.1| hypothetical protein SPAR92_1701 [Streptococcus pneumoniae GA47360]
gi|418189987|ref|ZP_12826499.1| hypothetical protein SPAR94_1751 [Streptococcus pneumoniae GA47373]
gi|418192189|ref|ZP_12828691.1| hypothetical protein SPAR96_1722 [Streptococcus pneumoniae GA47388]
gi|418194316|ref|ZP_12830805.1| hypothetical protein SPAR119_1602 [Streptococcus pneumoniae
GA47439]
gi|418202958|ref|ZP_12839387.1| GTPase family protein [Streptococcus pneumoniae GA52306]
gi|418214947|ref|ZP_12841681.1| hypothetical protein SPAR118_1750 [Streptococcus pneumoniae
GA54644]
gi|418219476|ref|ZP_12846141.1| hypothetical protein SPAR145_1764 [Streptococcus pneumoniae NP127]
gi|418230522|ref|ZP_12857121.1| hypothetical protein SPAR136_1771 [Streptococcus pneumoniae
EU-NP01]
gi|418234949|ref|ZP_12861525.1| hypothetical protein SPAR17_1732 [Streptococcus pneumoniae GA08780]
gi|418239274|ref|ZP_12865825.1| hypothetical protein SPAR146_1731 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419456099|ref|ZP_13996056.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP04]
gi|419462910|ref|ZP_14002813.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02714]
gi|419476080|ref|ZP_14015916.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14688]
gi|419478389|ref|ZP_14018212.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA18068]
gi|419482786|ref|ZP_14022573.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40563]
gi|419484978|ref|ZP_14024753.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43257]
gi|419487226|ref|ZP_14026988.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44128]
gi|419491647|ref|ZP_14031385.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47179]
gi|419508845|ref|ZP_14048496.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49542]
gi|419515255|ref|ZP_14054880.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
England14-9]
gi|419521681|ref|ZP_14061276.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05245]
gi|419526463|ref|ZP_14066021.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14373]
gi|419532946|ref|ZP_14072461.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47794]
gi|421209516|ref|ZP_15666529.1| hypothetical protein AMCSP11_001704 [Streptococcus pneumoniae
2070005]
gi|421225586|ref|ZP_15682324.1| hypothetical protein AMCSP06_001724 [Streptococcus pneumoniae
2070768]
gi|421227944|ref|ZP_15684646.1| hypothetical protein AMCSP08_001763 [Streptococcus pneumoniae
2072047]
gi|421236837|ref|ZP_15693434.1| GTP-binding protein [Streptococcus pneumoniae 2071004]
gi|421241211|ref|ZP_15697756.1| GTP-binding protein [Streptococcus pneumoniae 2080913]
gi|421243681|ref|ZP_15700193.1| GTP-binding protein [Streptococcus pneumoniae 2081074]
gi|421248020|ref|ZP_15704498.1| GTP-binding protein [Streptococcus pneumoniae 2082170]
gi|421271160|ref|ZP_15722014.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR48]
gi|421275460|ref|ZP_15726289.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA52612]
gi|421279526|ref|ZP_15730332.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17301]
gi|421285894|ref|ZP_15736670.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60190]
gi|421294883|ref|ZP_15745604.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56113]
gi|421296582|ref|ZP_15747291.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58581]
gi|421301603|ref|ZP_15752273.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19998]
gi|444387594|ref|ZP_21185613.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
PCS125219]
gi|444389152|ref|ZP_21187069.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS70012]
gi|444392013|ref|ZP_21189773.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS81218]
gi|444394829|ref|ZP_21192379.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0002]
gi|444398200|ref|ZP_21195683.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0006]
gi|444399303|ref|ZP_21196771.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0007]
gi|444402501|ref|ZP_21199664.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0008]
gi|444405544|ref|ZP_21202419.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0009]
gi|444407818|ref|ZP_21204485.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0010]
gi|444415694|ref|ZP_21211923.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0199]
gi|444417246|ref|ZP_21213299.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0360]
gi|444419622|ref|ZP_21215470.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0427]
gi|14973245|gb|AAK75825.1| GTP-binding protein [Streptococcus pneumoniae TIGR4]
gi|147764371|gb|EDK71302.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|147930473|gb|EDK81456.1| GTP-binding protein [Streptococcus pneumoniae SP23-BS72]
gi|172043326|gb|EDT51372.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|183572678|gb|EDT93206.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|183574264|gb|EDT94792.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|194356589|gb|ACF55037.1| GTP-binding protein [Streptococcus pneumoniae G54]
gi|301802449|emb|CBW35205.1| GTP-binding protein [Streptococcus pneumoniae INV200]
gi|302598712|gb|EFL65750.1| GTP-binding protein YqeH [Streptococcus pneumoniae BS455]
gi|302636932|gb|EFL67421.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|302640187|gb|EFL70642.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|302641937|gb|EFL72291.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|302643814|gb|EFL74077.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|302646750|gb|EFL76975.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|306485025|gb|ADM91894.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|332072581|gb|EGI83064.1| GTPase family protein [Streptococcus pneumoniae GA17570]
gi|332074089|gb|EGI84567.1| GTPase family protein [Streptococcus pneumoniae GA41301]
gi|353758436|gb|EHD39028.1| hypothetical protein SPAR87_1205 [Streptococcus pneumoniae GA47033]
gi|353774741|gb|EHD55228.1| hypothetical protein SPAR143_1719 [Streptococcus pneumoniae NP070]
gi|353792641|gb|EHD73013.1| hypothetical protein SPAR80_1676 [Streptococcus pneumoniae GA44194]
gi|353802221|gb|EHD82521.1| hypothetical protein SPAR14_1696 [Streptococcus pneumoniae GA07643]
gi|353804651|gb|EHD84931.1| hypothetical protein SPAR22_1792 [Streptococcus pneumoniae GA11304]
gi|353826855|gb|EHE07012.1| GTPase family protein [Streptococcus pneumoniae GA17328]
gi|353840610|gb|EHE20674.1| GTPase family protein [Streptococcus pneumoniae GA41437]
gi|353843176|gb|EHE23221.1| GTPase family protein [Streptococcus pneumoniae GA41688]
gi|353849712|gb|EHE29717.1| hypothetical protein SPAR92_1701 [Streptococcus pneumoniae GA47360]
gi|353853714|gb|EHE33695.1| hypothetical protein SPAR94_1751 [Streptococcus pneumoniae GA47373]
gi|353855275|gb|EHE35245.1| hypothetical protein SPAR96_1722 [Streptococcus pneumoniae GA47388]
gi|353857894|gb|EHE37856.1| hypothetical protein SPAR119_1602 [Streptococcus pneumoniae
GA47439]
gi|353867515|gb|EHE47410.1| GTPase family protein [Streptococcus pneumoniae GA52306]
gi|353869677|gb|EHE49558.1| hypothetical protein SPAR118_1750 [Streptococcus pneumoniae
GA54644]
gi|353873836|gb|EHE53695.1| hypothetical protein SPAR145_1764 [Streptococcus pneumoniae NP127]
gi|353885403|gb|EHE65192.1| hypothetical protein SPAR136_1771 [Streptococcus pneumoniae
EU-NP01]
gi|353886571|gb|EHE66353.1| hypothetical protein SPAR17_1732 [Streptococcus pneumoniae GA08780]
gi|353892265|gb|EHE72014.1| hypothetical protein SPAR146_1731 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353904853|gb|EHE80303.1| hypothetical protein SPAR28_1713 [Streptococcus pneumoniae GA13338]
gi|379530342|gb|EHY95582.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02714]
gi|379538981|gb|EHZ04161.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05245]
gi|379557103|gb|EHZ22150.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14373]
gi|379558862|gb|EHZ23894.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14688]
gi|379564901|gb|EHZ29896.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA18068]
gi|379579378|gb|EHZ44285.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40563]
gi|379581731|gb|EHZ46615.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43257]
gi|379585595|gb|EHZ50451.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44128]
gi|379593009|gb|EHZ57824.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47179]
gi|379605466|gb|EHZ70217.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47794]
gi|379610799|gb|EHZ75529.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49542]
gi|379628075|gb|EHZ92681.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP04]
gi|379635804|gb|EIA00363.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
England14-9]
gi|395573612|gb|EJG34202.1| hypothetical protein AMCSP11_001704 [Streptococcus pneumoniae
2070005]
gi|395589073|gb|EJG49395.1| hypothetical protein AMCSP06_001724 [Streptococcus pneumoniae
2070768]
gi|395594228|gb|EJG54468.1| hypothetical protein AMCSP08_001763 [Streptococcus pneumoniae
2072047]
gi|395601600|gb|EJG61747.1| GTP-binding protein [Streptococcus pneumoniae 2071004]
gi|395606330|gb|EJG66437.1| GTP-binding protein [Streptococcus pneumoniae 2081074]
gi|395607589|gb|EJG67686.1| GTP-binding protein [Streptococcus pneumoniae 2080913]
gi|395612894|gb|EJG72928.1| GTP-binding protein [Streptococcus pneumoniae 2082170]
gi|395867374|gb|EJG78498.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR48]
gi|395873424|gb|EJG84516.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA52612]
gi|395879019|gb|EJG90081.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17301]
gi|395885881|gb|EJG96902.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60190]
gi|395893452|gb|EJH04439.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56113]
gi|395895455|gb|EJH06430.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58581]
gi|395899163|gb|EJH10107.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19998]
gi|406370061|gb|AFS43751.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|444252472|gb|ELU58935.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
PCS125219]
gi|444257752|gb|ELU64085.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS70012]
gi|444259447|gb|ELU65761.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0002]
gi|444260857|gb|ELU67165.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0006]
gi|444264172|gb|ELU70277.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS81218]
gi|444266357|gb|ELU72314.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0008]
gi|444268869|gb|ELU74693.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0007]
gi|444271414|gb|ELU77165.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0010]
gi|444273115|gb|ELU78796.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0009]
gi|444279221|gb|ELU84627.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0199]
gi|444284412|gb|ELU89560.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0360]
gi|444286444|gb|ELU91426.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0427]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|405760389|ref|YP_006700985.1| GTP-binding protein [Streptococcus pneumoniae SPNA45]
gi|404277278|emb|CCM07787.1| GTP-binding protein [Streptococcus pneumoniae SPNA45]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|418167351|ref|ZP_12804005.1| GTPase family protein [Streptococcus pneumoniae GA17971]
gi|353828517|gb|EHE08655.1| GTPase family protein [Streptococcus pneumoniae GA17971]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|417922946|ref|ZP_12566429.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK569]
gi|342837476|gb|EGU71661.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK569]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|319939798|ref|ZP_08014154.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
gi|319811011|gb|EFW07326.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDKEV--ITTSRFPGTTLD 205
>gi|387626936|ref|YP_006063112.1| GTP-binding protein [Streptococcus pneumoniae INV104]
gi|444382383|ref|ZP_21180586.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8106]
gi|444385619|ref|ZP_21183691.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8203]
gi|301794722|emb|CBW37173.1| GTP-binding protein [Streptococcus pneumoniae INV104]
gi|444249689|gb|ELU56177.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8203]
gi|444252657|gb|ELU59119.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8106]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|419783378|ref|ZP_14309166.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK610]
gi|383182262|gb|EIC74820.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK610]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|419480588|ref|ZP_14020392.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19101]
gi|419500293|ref|ZP_14039987.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47597]
gi|379569757|gb|EHZ34724.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19101]
gi|379599601|gb|EHZ64384.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47597]
gi|429316588|emb|CCP36296.1| GTP-binding protein [Streptococcus pneumoniae SPN034156]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|417934231|ref|ZP_12577551.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
F0392]
gi|340770801|gb|EGR93316.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
F0392]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|417847402|ref|ZP_12493370.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1073]
gi|339457050|gb|EGP69631.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1073]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|322377769|ref|ZP_08052258.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. M334]
gi|321281192|gb|EFX58203.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. M334]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|293364879|ref|ZP_06611596.1| GTP-binding protein [Streptococcus oralis ATCC 35037]
gi|307703131|ref|ZP_07640077.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|291316329|gb|EFE56765.1| GTP-binding protein [Streptococcus oralis ATCC 35037]
gi|307623206|gb|EFO02197.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|223044373|ref|ZP_03614407.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis SK14]
gi|417907787|ref|ZP_12551554.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis VCU116]
gi|222442242|gb|EEE48353.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis SK14]
gi|341594874|gb|EGS37552.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis VCU116]
Length = 366
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKST N ++ + D++ TTS +PGTTL+++
Sbjct: 162 DVYVVGTTNVGKSTFINKLIE---ISVGEKDVV---TTSRFPGTTLDMI 204
>gi|418975267|ref|ZP_13523176.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK1074]
gi|383348638|gb|EID26597.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK1074]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|418968094|ref|ZP_13519722.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK616]
gi|383341384|gb|EID19644.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK616]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|423069216|ref|ZP_17058003.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0395]
gi|355365104|gb|EHG12830.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0395]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDKEV--ITTSRFPGTTLD 205
>gi|322388318|ref|ZP_08061922.1| GTP-binding protein [Streptococcus infantis ATCC 700779]
gi|419842394|ref|ZP_14365742.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis ATCC
700779]
gi|321140990|gb|EFX36491.1| GTP-binding protein [Streptococcus infantis ATCC 700779]
gi|385703871|gb|EIG40973.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis ATCC
700779]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|401684247|ref|ZP_10816130.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. BS35b]
gi|400186552|gb|EJO20764.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. BS35b]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|419493875|ref|ZP_14033600.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47210]
gi|421290311|ref|ZP_15741061.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA54354]
gi|421305703|ref|ZP_15756357.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62331]
gi|379592448|gb|EHZ57264.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47210]
gi|395887996|gb|EJG99010.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA54354]
gi|395904661|gb|EJH15575.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62331]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|419460561|ref|ZP_14000489.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02270]
gi|379530697|gb|EHY95936.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02270]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|418228253|ref|ZP_12854870.1| hypothetical protein SPAR135_1637 [Streptococcus pneumoniae
3063-00]
gi|353880648|gb|EHE60463.1| hypothetical protein SPAR135_1637 [Streptococcus pneumoniae
3063-00]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|225859501|ref|YP_002741011.1| GTP-binding protein YqeH [Streptococcus pneumoniae 70585]
gi|225722019|gb|ACO17873.1| GTP-binding protein [Streptococcus pneumoniae 70585]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|148994934|ref|ZP_01823936.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|418149106|ref|ZP_12785868.1| GTPase family protein [Streptococcus pneumoniae GA13856]
gi|419453700|ref|ZP_13993670.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP03]
gi|419506630|ref|ZP_14046291.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49194]
gi|421220833|ref|ZP_15677672.1| hypothetical protein AMCSP05_001569 [Streptococcus pneumoniae
2070425]
gi|421223087|ref|ZP_15679869.1| hypothetical protein AMCSP14_001511 [Streptococcus pneumoniae
2070531]
gi|147926936|gb|EDK77982.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|353811442|gb|EHD91684.1| GTPase family protein [Streptococcus pneumoniae GA13856]
gi|379608544|gb|EHZ73290.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49194]
gi|379625770|gb|EHZ90396.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP03]
gi|395586743|gb|EJG47110.1| hypothetical protein AMCSP05_001569 [Streptococcus pneumoniae
2070425]
gi|395587067|gb|EJG47429.1| hypothetical protein AMCSP14_001511 [Streptococcus pneumoniae
2070531]
Length = 368
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|421207182|ref|ZP_15664234.1| hypothetical protein AMCSP20_001750 [Streptococcus pneumoniae
2090008]
gi|421230360|ref|ZP_15687024.1| putative GTP-binding protein [Streptococcus pneumoniae 2061376]
gi|421292619|ref|ZP_15743353.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56348]
gi|421312558|ref|ZP_15763160.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58981]
gi|395574518|gb|EJG35096.1| hypothetical protein AMCSP20_001750 [Streptococcus pneumoniae
2090008]
gi|395593886|gb|EJG54128.1| putative GTP-binding protein [Streptococcus pneumoniae 2061376]
gi|395891926|gb|EJH02920.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56348]
gi|395909412|gb|EJH20288.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58981]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|385262972|ref|ZP_10041069.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK643]
gi|385188947|gb|EIF36417.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK643]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|315612639|ref|ZP_07887551.1| ribosome biogenesis GTPase YqeH [Streptococcus sanguinis ATCC
49296]
gi|315315226|gb|EFU63266.1| ribosome biogenesis GTPase YqeH [Streptococcus sanguinis ATCC
49296]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|312863524|ref|ZP_07723762.1| ribosome biogenesis GTPase YqeH [Streptococcus vestibularis F0396]
gi|311101060|gb|EFQ59265.1| ribosome biogenesis GTPase YqeH [Streptococcus vestibularis F0396]
Length = 372
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDII---TTSRFPGTTLD 205
>gi|307710602|ref|ZP_07647036.1| conserved hypothetical protein [Streptococcus mitis SK564]
gi|307618647|gb|EFN97789.1| conserved hypothetical protein [Streptococcus mitis SK564]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|306829001|ref|ZP_07462192.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis ATCC 6249]
gi|304428806|gb|EFM31895.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis ATCC 6249]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|225857361|ref|YP_002738872.1| GTP-binding protein YqeH [Streptococcus pneumoniae P1031]
gi|444409512|ref|ZP_21206102.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0076]
gi|444412894|ref|ZP_21209213.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0153]
gi|444421884|ref|ZP_21217552.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0446]
gi|225725831|gb|ACO21683.1| GTP-binding protein [Streptococcus pneumoniae P1031]
gi|444274133|gb|ELU79788.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0153]
gi|444279361|gb|ELU84762.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0076]
gi|444288836|gb|ELU93725.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0446]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|15903636|ref|NP_359186.1| GTP-binding protein YqeH [Streptococcus pneumoniae R6]
gi|116516270|ref|YP_817012.1| GTP-binding protein YqeH [Streptococcus pneumoniae D39]
gi|418200723|ref|ZP_12837166.1| hypothetical protein SPAR109_1706 [Streptococcus pneumoniae
GA47976]
gi|421211617|ref|ZP_15668599.1| hypothetical protein AMCSP03_001638 [Streptococcus pneumoniae
2070035]
gi|421232451|ref|ZP_15689092.1| hypothetical protein AMCSP16_001610 [Streptococcus pneumoniae
2080076]
gi|421266746|ref|ZP_15717626.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR27]
gi|15459261|gb|AAL00397.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076846|gb|ABJ54566.1| GTP-binding protein [Streptococcus pneumoniae D39]
gi|353864264|gb|EHE44182.1| hypothetical protein SPAR109_1706 [Streptococcus pneumoniae
GA47976]
gi|395572725|gb|EJG33320.1| hypothetical protein AMCSP03_001638 [Streptococcus pneumoniae
2070035]
gi|395594954|gb|EJG55189.1| hypothetical protein AMCSP16_001610 [Streptococcus pneumoniae
2080076]
gi|395866814|gb|EJG77942.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR27]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|406577139|ref|ZP_11052757.1| GTPase YqeH [Streptococcus sp. GMD6S]
gi|404460314|gb|EKA06584.1| GTPase YqeH [Streptococcus sp. GMD6S]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|383937703|ref|ZP_09990947.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
SK674]
gi|418968494|ref|ZP_13520084.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383352598|gb|EID30283.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715431|gb|EID71393.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
SK674]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|417937776|ref|ZP_12581076.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK970]
gi|343392040|gb|EGV04613.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK970]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|417694623|ref|ZP_12343810.1| GTPase family protein [Streptococcus pneumoniae GA47901]
gi|332201172|gb|EGJ15243.1| GTPase family protein [Streptococcus pneumoniae GA47901]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|322516195|ref|ZP_08069128.1| GTP-binding protein [Streptococcus vestibularis ATCC 49124]
gi|322125371|gb|EFX96726.1| GTP-binding protein [Streptococcus vestibularis ATCC 49124]
Length = 372
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDII---TTSRFPGTTLD 205
>gi|322392356|ref|ZP_08065817.1| GTP-binding protein [Streptococcus peroris ATCC 700780]
gi|321144891|gb|EFX40291.1| GTP-binding protein [Streptococcus peroris ATCC 700780]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|307708267|ref|ZP_07644734.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|307615713|gb|EFN94919.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|306825774|ref|ZP_07459113.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|414157993|ref|ZP_11414287.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0441]
gi|304432135|gb|EFM35112.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|410870538|gb|EKS18495.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0441]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|289168472|ref|YP_003446741.1| hypothetical protein smi_1639 [Streptococcus mitis B6]
gi|288908039|emb|CBJ22879.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|148997805|ref|ZP_01825369.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|168575059|ref|ZP_02721022.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|307068375|ref|YP_003877341.1| putative GTPase [Streptococcus pneumoniae AP200]
gi|419471635|ref|ZP_14011494.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA07914]
gi|419504483|ref|ZP_14044151.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47760]
gi|421239079|ref|ZP_15695643.1| GTP-binding protein [Streptococcus pneumoniae 2071247]
gi|421314623|ref|ZP_15765210.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47562]
gi|147756304|gb|EDK63346.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|183578795|gb|EDT99323.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|306409912|gb|ADM85339.1| Predicted GTPase [Streptococcus pneumoniae AP200]
gi|379546351|gb|EHZ11490.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA07914]
gi|379605871|gb|EHZ70621.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47760]
gi|395600722|gb|EJG60877.1| GTP-binding protein [Streptococcus pneumoniae 2071247]
gi|395913308|gb|EJH24161.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47562]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|421268909|ref|ZP_15719778.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR95]
gi|421307943|ref|ZP_15758585.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60132]
gi|395869163|gb|EJG80279.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR95]
gi|395907328|gb|EJH18222.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60132]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|419781006|ref|ZP_14306838.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK100]
gi|383184398|gb|EIC76912.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK100]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|307103636|gb|EFN51894.1| hypothetical protein CHLNCDRAFT_139489 [Chlorella variabilis]
Length = 648
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQ-SDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
GDV++VG N GKS+L NA Q + L + K TT+P PGTTL +L+ + T
Sbjct: 376 GDVWVVGAQNAGKSSLINAMRQVARLPRDK------DVTTAPLPGTTLGMLRVTGLLPTG 429
Query: 92 CKV 94
CK+
Sbjct: 430 CKM 432
>gi|417936728|ref|ZP_12580035.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis X]
gi|343400244|gb|EGV12764.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis X]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|387784745|ref|YP_006070828.1| putative GTP binding protein [Streptococcus salivarius JIM8777]
gi|338745627|emb|CCB95993.1| putative GTP binding protein [Streptococcus salivarius JIM8777]
Length = 372
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDII---TTSRFPGTTLD 205
>gi|307706091|ref|ZP_07642910.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307618491|gb|EFN97639.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|148989411|ref|ZP_01820779.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
gi|147925161|gb|EDK76241.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
Length = 368
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|440803475|gb|ELR24376.1| ribosome biogenesis GTPase YqeH, putative [Acanthamoeba castellanii
str. Neff]
Length = 578
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 18/87 (20%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSD------------LCKIKASDLISRATTSPWPGTTLNL 81
DVY+VGCTNVGKSTL N + + + K +LI TTS PGTTLNL
Sbjct: 171 DVYVVGCTNVGKSTLINRLISINTKGTYNSLTVHIVQGPKKRNLI---TTSIVPGTTLNL 227
Query: 82 LKEIIKIQTVCKVKELGKKILLSQVKG 108
+ + + K +GK+ L G
Sbjct: 228 ISFPLGGKKAFK---MGKRAFLYDTPG 251
>gi|340399488|ref|YP_004728513.1| nitric-oxide synthase (GTPase) [Streptococcus salivarius CCHSS3]
gi|338743481|emb|CCB93991.1| nitric-oxide synthase (GTPase) [Streptococcus salivarius CCHSS3]
Length = 372
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDII---TTSRFPGTTLD 205
>gi|421276677|ref|ZP_15727498.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SPAR10]
gi|395876883|gb|EJG87955.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SPAR10]
Length = 368
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|386714891|ref|YP_006181214.1| GTPase family protein [Halobacillus halophilus DSM 2266]
gi|384074447|emb|CCG45940.1| GTPase familiy protein [Halobacillus halophilus DSM 2266]
Length = 366
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
GDVY+VG TNVGKST N + + + A TTS +PGTTL +
Sbjct: 159 GGDVYVVGTTNVGKSTFINTLISNTSGEKDA------ITTSYFPGTTLGFI 203
>gi|417793547|ref|ZP_12440821.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK255]
gi|334272686|gb|EGL91046.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK255]
Length = 368
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|227524677|ref|ZP_03954726.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
gi|227088161|gb|EEI23473.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
Length = 378
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ +++ + TTS +PGTTL+
Sbjct: 174 DVYVVGVTNVGKSTLINAVIR------QSTGIKELITTSRFPGTTLD 214
>gi|168493658|ref|ZP_02717801.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|418074577|ref|ZP_12711828.1| GTPase family protein [Streptococcus pneumoniae GA11184]
gi|418076966|ref|ZP_12714199.1| hypothetical protein SPAR98_1893 [Streptococcus pneumoniae GA47502]
gi|418090106|ref|ZP_12727260.1| hypothetical protein SPAR77_1696 [Streptococcus pneumoniae GA43265]
gi|418099071|ref|ZP_12736168.1| hypothetical protein SPAR122_1653 [Streptococcus pneumoniae
6901-05]
gi|418105855|ref|ZP_12742911.1| hypothetical protein SPAR85_1783 [Streptococcus pneumoniae GA44500]
gi|418115265|ref|ZP_12752251.1| hypothetical protein SPAR125_1666 [Streptococcus pneumoniae
5787-06]
gi|418117423|ref|ZP_12754392.1| hypothetical protein SPAR124_1638 [Streptococcus pneumoniae
6963-05]
gi|418134603|ref|ZP_12771460.1| hypothetical protein SPAR23_0873 [Streptococcus pneumoniae GA11426]
gi|418174140|ref|ZP_12810752.1| GTPase family protein [Streptococcus pneumoniae GA41277]
gi|418217193|ref|ZP_12843873.1| GTPase family protein [Streptococcus pneumoniae Netherlands15B-37]
gi|419432124|ref|ZP_13972257.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP05]
gi|419434026|ref|ZP_13974144.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40183]
gi|419440933|ref|ZP_13980978.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40410]
gi|419465062|ref|ZP_14004953.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04175]
gi|419469549|ref|ZP_14009417.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA06083]
gi|419498116|ref|ZP_14037823.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47522]
gi|419535212|ref|ZP_14074711.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17457]
gi|421281736|ref|ZP_15732533.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04672]
gi|421310151|ref|ZP_15760776.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62681]
gi|183576456|gb|EDT96984.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|353747106|gb|EHD27764.1| hypothetical protein SPAR98_1893 [Streptococcus pneumoniae GA47502]
gi|353747178|gb|EHD27835.1| GTPase family protein [Streptococcus pneumoniae GA11184]
gi|353761297|gb|EHD41869.1| hypothetical protein SPAR77_1696 [Streptococcus pneumoniae GA43265]
gi|353769053|gb|EHD49575.1| hypothetical protein SPAR122_1653 [Streptococcus pneumoniae
6901-05]
gi|353776031|gb|EHD56510.1| hypothetical protein SPAR85_1783 [Streptococcus pneumoniae GA44500]
gi|353785349|gb|EHD65768.1| hypothetical protein SPAR125_1666 [Streptococcus pneumoniae
5787-06]
gi|353788104|gb|EHD68502.1| hypothetical protein SPAR124_1638 [Streptococcus pneumoniae
6963-05]
gi|353838096|gb|EHE18177.1| GTPase family protein [Streptococcus pneumoniae GA41277]
gi|353870466|gb|EHE50339.1| GTPase family protein [Streptococcus pneumoniae Netherlands15B-37]
gi|353901840|gb|EHE77370.1| hypothetical protein SPAR23_0873 [Streptococcus pneumoniae GA11426]
gi|379536662|gb|EHZ01848.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04175]
gi|379544353|gb|EHZ09498.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA06083]
gi|379563373|gb|EHZ28377.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17457]
gi|379577027|gb|EHZ41951.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40183]
gi|379578003|gb|EHZ42920.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40410]
gi|379598949|gb|EHZ63734.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47522]
gi|379629205|gb|EHZ93806.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP05]
gi|395881001|gb|EJG92052.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04672]
gi|395909766|gb|EJH20641.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62681]
Length = 368
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|168486390|ref|ZP_02710898.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|418185507|ref|ZP_12822047.1| GTPase family protein [Streptococcus pneumoniae GA47283]
gi|419511011|ref|ZP_14050652.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae NP141]
gi|419530906|ref|ZP_14070432.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40028]
gi|421215847|ref|ZP_15672768.1| hypothetical protein AMCSP04_001566 [Streptococcus pneumoniae
2070109]
gi|183570601|gb|EDT91129.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|353848237|gb|EHE28253.1| GTPase family protein [Streptococcus pneumoniae GA47283]
gi|379571315|gb|EHZ36273.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40028]
gi|379631614|gb|EHZ96191.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae NP141]
gi|395580054|gb|EJG40549.1| hypothetical protein AMCSP04_001566 [Streptococcus pneumoniae
2070109]
Length = 368
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|227510525|ref|ZP_03940574.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190177|gb|EEI70244.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 378
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ +++ + TTS +PGTTL+
Sbjct: 174 DVYVVGVTNVGKSTLINAVIR------QSTGIKELITTSRFPGTTLD 214
>gi|417915755|ref|ZP_12559360.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
SK95]
gi|342832772|gb|EGU67062.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
SK95]
Length = 368
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|227513534|ref|ZP_03943583.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227083407|gb|EEI18719.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
Length = 378
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ +++ + TTS +PGTTL+
Sbjct: 174 DVYVVGVTNVGKSTLINAVIR------QSTGIKELITTSRFPGTTLD 214
>gi|389571867|ref|ZP_10161955.1| ribosome biogenesis GTPase YqeH [Bacillus sp. M 2-6]
gi|388428353|gb|EIL86150.1| ribosome biogenesis GTPase YqeH [Bacillus sp. M 2-6]
Length = 366
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 20 PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
P ++ A +VY+VGCTNVGKST N ++ + S + TTS +PGTTL
Sbjct: 147 PEVMEAIDHYREGRNVYVVGCTNVGKSTFINRIIK------EVSGEENVITTSQYPGTTL 200
Query: 80 NLLK 83
+ ++
Sbjct: 201 DAIE 204
>gi|322374823|ref|ZP_08049337.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C300]
gi|321280323|gb|EFX57362.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C300]
Length = 368
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|407978439|ref|ZP_11159270.1| GTPase YqeH [Bacillus sp. HYC-10]
gi|407414997|gb|EKF36613.1| GTPase YqeH [Bacillus sp. HYC-10]
Length = 366
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 20 PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
P ++ A +VY+VGCTNVGKST N ++ + S + TTS +PGTTL
Sbjct: 147 PEVMEAIDHYRDGRNVYVVGCTNVGKSTFINRIIK------EVSGEENVITTSQYPGTTL 200
Query: 80 NLLK 83
+ ++
Sbjct: 201 DAIE 204
>gi|157693068|ref|YP_001487530.1| GTP-binding protein YqeH [Bacillus pumilus SAFR-032]
gi|157681826|gb|ABV62970.1| GTP-binding protein [Bacillus pumilus SAFR-032]
Length = 366
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 20 PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
P ++ A +VY+VGCTNVGKST N ++ + S + TTS +PGTTL
Sbjct: 147 PEVMEAIDHYREGRNVYVVGCTNVGKSTFINRIIK------EVSGEENVITTSQYPGTTL 200
Query: 80 NLLK 83
+ ++
Sbjct: 201 DAIE 204
>gi|449446267|ref|XP_004140893.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 648
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NA + + K +++ T +P PGTTL +L+
Sbjct: 382 GNVWVIGAQNAGKSTLINALAKKERAK------VTKLTEAPIPGTTLGILR 426
>gi|116333668|ref|YP_795195.1| GTP-binding protein YqeH [Lactobacillus brevis ATCC 367]
gi|116099015|gb|ABJ64164.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
Length = 380
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + DLI TTS +PGTTL+
Sbjct: 177 DVYVVGVTNVGKSTLINQIIRQN---TGVKDLI---TTSKFPGTTLD 217
>gi|194017759|ref|ZP_03056369.1| ribosome biogenesis GTPase YqeH [Bacillus pumilus ATCC 7061]
gi|194010659|gb|EDW20231.1| ribosome biogenesis GTPase YqeH [Bacillus pumilus ATCC 7061]
Length = 366
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 20 PNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
P ++ A +VY+VGCTNVGKST N ++ + S + TTS +PGTTL
Sbjct: 147 PEVMEAIDHYREGRNVYVVGCTNVGKSTFINRIIK------EVSGKENVITTSQYPGTTL 200
Query: 80 NLLK 83
+ ++
Sbjct: 201 DAIE 204
>gi|406671275|ref|ZP_11078514.1| ribosome biogenesis GTPase YqeH [Facklamia hominis CCUG 36813]
gi|405580525|gb|EKB54584.1| ribosome biogenesis GTPase YqeH [Facklamia hominis CCUG 36813]
Length = 374
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
D+YLVG TNVGKSTL N +Q D TTS PGTTL+L++
Sbjct: 171 DIYLVGITNVGKSTLLNRLIQH-----YGGDQ-EVITTSNHPGTTLDLIR 214
>gi|421453058|ref|ZP_15902414.1| GTP-binding protein [Streptococcus salivarius K12]
gi|400181367|gb|EJO15634.1| GTP-binding protein [Streptococcus salivarius K12]
Length = 372
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDVI---TTSRFPGTTLD 205
>gi|387760687|ref|YP_006067664.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius 57.I]
gi|339291454|gb|AEJ52801.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius 57.I]
Length = 372
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDVI---TTSRFPGTTLD 205
>gi|419706291|ref|ZP_14233817.1| Putative conserved GTP-binding protein [Streptococcus salivarius
PS4]
gi|383283961|gb|EIC81899.1| Putative conserved GTP-binding protein [Streptococcus salivarius
PS4]
Length = 372
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDVI---TTSRFPGTTLD 205
>gi|365904269|ref|ZP_09442028.1| GTPase YqeH [Lactobacillus versmoldensis KCTC 3814]
Length = 371
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N + ++ SD+ TTS +PGTTL+
Sbjct: 171 DVYVVGTTNTGKSTLINRIISAN------SDVKDLITTSRFPGTTLD 211
>gi|322373553|ref|ZP_08048089.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C150]
gi|321278595|gb|EFX55664.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C150]
Length = 372
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDVI---TTSRFPGTTLD 205
>gi|55823525|ref|YP_141966.1| GTP-binding protein YqeH [Streptococcus thermophilus CNRZ1066]
gi|116628312|ref|YP_820931.1| GTP-binding protein YqeH [Streptococcus thermophilus LMD-9]
gi|386087223|ref|YP_006003097.1| Ribosome biogenesis GTPase YqeH [Streptococcus thermophilus ND03]
gi|386345319|ref|YP_006041483.1| hypothetical protein STH8232_1866 [Streptococcus thermophilus JIM
8232]
gi|387910325|ref|YP_006340631.1| GTP-binding protein YqeH [Streptococcus thermophilus MN-ZLW-002]
gi|445382105|ref|ZP_21427172.1| GTPase YqeH [Streptococcus thermophilus MTCC 5460]
gi|445394858|ref|ZP_21428906.1| GTPase YqeH [Streptococcus thermophilus MTCC 5461]
gi|55739510|gb|AAV63151.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|116101589|gb|ABJ66735.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
gi|312278936|gb|ADQ63593.1| Ribosome biogenesis GTPase YqeH [Streptococcus thermophilus ND03]
gi|339278780|emb|CCC20528.1| hypothetical protein STH8232_1866 [Streptococcus thermophilus JIM
8232]
gi|387575260|gb|AFJ83966.1| GTP-binding protein YqeH [Streptococcus thermophilus MN-ZLW-002]
gi|444748731|gb|ELW73685.1| GTPase YqeH [Streptococcus thermophilus MTCC 5461]
gi|444748809|gb|ELW73759.1| GTPase YqeH [Streptococcus thermophilus MTCC 5460]
Length = 372
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDVI---TTSRFPGTTLD 205
>gi|418026729|ref|ZP_12665523.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
gi|354694903|gb|EHE94534.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
Length = 272
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 60 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDVI---TTSRFPGTTLD 105
>gi|421766272|ref|ZP_16203047.1| GTP-binding protein YqeH [Lactococcus garvieae DCC43]
gi|407625279|gb|EKF51990.1| GTP-binding protein YqeH [Lactococcus garvieae DCC43]
Length = 375
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ + D + TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINAIIKL----VTGDDNV--ITTSRFPGTTLD 212
>gi|55821597|ref|YP_140039.1| GTP-binding protein YqeH [Streptococcus thermophilus LMG 18311]
gi|55737582|gb|AAV61224.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
Length = 372
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIKE---ITGDKDVI---TTSRFPGTTLD 205
>gi|294615006|ref|ZP_06694895.1| nitric-oxide synthase [Enterococcus faecium E1636]
gi|291592137|gb|EFF23757.1| nitric-oxide synthase [Enterococcus faecium E1636]
Length = 340
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|392330686|ref|ZP_10275301.1| GTP-binding protein YqeH [Streptococcus canis FSL Z3-227]
gi|391418365|gb|EIQ81177.1| GTP-binding protein YqeH [Streptococcus canis FSL Z3-227]
Length = 372
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L +VY+VG TNVGKSTL NA +Q D+I TTS +PGTTL+
Sbjct: 160 LRKGRNVYVVGVTNVGKSTLINAIIQE---VTGDKDVI---TTSRFPGTTLD 205
>gi|347522463|ref|YP_004780034.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|385833847|ref|YP_005871622.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|343181031|dbj|BAK59370.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|343183000|dbj|BAK61338.1| GTP-binding protein [Lactococcus garvieae Lg2]
Length = 368
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ + D + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIKL----VTGDDNV--ITTSRFPGTTLD 205
>gi|420143153|ref|ZP_14650656.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
gi|391856958|gb|EIT67492.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
Length = 368
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL NA ++ + D + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINAIIKL----VTGDDNV--ITTSRFPGTTLD 205
>gi|251772739|gb|EES53301.1| tRNA modification GTPase TrmE [Leptospirillum ferrodiazotrophum]
Length = 441
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 11/53 (20%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S+ V L G N GKS+LFN LQSD RA SP+PGTT +LL+
Sbjct: 215 SSFSVLLAGPPNSGKSSLFNRLLQSD-----------RAIVSPYPGTTRDLLE 256
>gi|357235992|ref|ZP_09123335.1| GTP-binding protein [Streptococcus criceti HS-6]
gi|356883974|gb|EHI74174.1| GTP-binding protein [Streptococcus criceti HS-6]
Length = 368
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L + DVY+VG TNVGKSTL NA ++ +I + TTS +PGTTL+
Sbjct: 160 LRAGRDVYVVGVTNVGKSTLINAIIK----EITGDQEV--ITTSRFPGTTLD 205
>gi|400289434|ref|ZP_10791463.1| GTP-binding protein YqeH [Streptococcus ratti FA-1 = DSM 20564]
gi|399922072|gb|EJN94887.1| GTP-binding protein YqeH [Streptococcus ratti FA-1 = DSM 20564]
Length = 368
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
L DVY+VG TNVGKSTL NA ++ D+I TTS +PGTTL+
Sbjct: 160 LRKGRDVYVVGVTNVGKSTLINAIIRE---ITGDKDVI---TTSRFPGTTLD 205
>gi|377809846|ref|YP_005005067.1| ribosome biogenesis GTPase YqeH [Pediococcus claussenii ATCC
BAA-344]
gi|361056587|gb|AEV95391.1| ribosome biogenesis GTPase YqeH [Pediococcus claussenii ATCC
BAA-344]
Length = 371
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 21 NIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
N+ A + DVY+VG TNVGKSTL N + + DLI TTS +PGTTL+
Sbjct: 156 NLFEAIEKYRNGKDVYVVGVTNVGKSTLINQLIA---IRNDIKDLI---TTSRFPGTTLD 209
>gi|304384686|ref|ZP_07367032.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici DSM
20284]
gi|304328880|gb|EFL96100.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici DSM
20284]
Length = 369
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N+ + + D+I TTS +PGTTL+ ++
Sbjct: 162 LRDGRDVYVVGVTNVGKSTLINSLIA---LRNGIKDVI---TTSRFPGTTLDRIE 210
>gi|90961476|ref|YP_535392.1| GTP-binding protein YqeH [Lactobacillus salivarius UCC118]
gi|301300328|ref|ZP_07206533.1| ribosome biogenesis GTPase YqeH [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|385840205|ref|YP_005863529.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|90820670|gb|ABD99309.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300214326|gb|ADJ78742.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|300852064|gb|EFK79743.1| ribosome biogenesis GTPase YqeH [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 373
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + S+LI TTS +PGTTL+
Sbjct: 170 DVYVVGVTNVGKSTLINRIIKQ---QTGISELI---TTSRFPGTTLD 210
>gi|418961114|ref|ZP_13513001.1| GTPase YqeH [Lactobacillus salivarius SMXD51]
gi|380344781|gb|EIA33127.1| GTPase YqeH [Lactobacillus salivarius SMXD51]
Length = 373
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + S+LI TTS +PGTTL+
Sbjct: 170 DVYVVGVTNVGKSTLINRIIKQ---QTGISELI---TTSRFPGTTLD 210
>gi|227890565|ref|ZP_04008370.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|417810594|ref|ZP_12457273.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
gi|227867503|gb|EEJ74924.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|335349390|gb|EGM50890.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
Length = 373
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + S+LI TTS +PGTTL+
Sbjct: 170 DVYVVGVTNVGKSTLINRIIKQ---QTGISELI---TTSRFPGTTLD 210
>gi|417788024|ref|ZP_12435707.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus salivarius NIAS840]
gi|334308201|gb|EGL99187.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus salivarius NIAS840]
Length = 373
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + S+LI TTS +PGTTL+
Sbjct: 170 DVYVVGVTNVGKSTLINRIIKQ---QTGISELI---TTSRFPGTTLD 210
>gi|56963402|ref|YP_175133.1| GTP-binding protein YqeH [Bacillus clausii KSM-K16]
gi|56909645|dbj|BAD64172.1| GTPase [Bacillus clausii KSM-K16]
Length = 372
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VGCTNVGKS+ N L + + TTS +PGTTL ++
Sbjct: 165 DVYVVGCTNVGKSSFINRILA-----MHGQTGEAMITTSHFPGTTLAMI 208
>gi|424993575|ref|ZP_18405561.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV168]
gi|402982222|gb|EJX97701.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV168]
Length = 369
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|430821234|ref|ZP_19439846.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0045]
gi|430438671|gb|ELA49082.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0045]
Length = 369
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|227550575|ref|ZP_03980624.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|257888600|ref|ZP_05668253.1| GTP-binding protein YqeH [Enterococcus faecium 1,141,733]
gi|257897022|ref|ZP_05676675.1| GTP-binding protein YqeH [Enterococcus faecium Com12]
gi|257898963|ref|ZP_05678616.1| GTP-binding protein YqeH [Enterococcus faecium Com15]
gi|293378715|ref|ZP_06624873.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium PC4.1]
gi|424763232|ref|ZP_18190711.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX1337RF]
gi|425055202|ref|ZP_18458687.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 505]
gi|431030888|ref|ZP_19490597.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1590]
gi|431595404|ref|ZP_19522164.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1861]
gi|431751398|ref|ZP_19540088.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2620]
gi|431758519|ref|ZP_19547146.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3083]
gi|431763994|ref|ZP_19552541.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3548]
gi|227180283|gb|EEI61255.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|257824654|gb|EEV51586.1| GTP-binding protein YqeH [Enterococcus faecium 1,141,733]
gi|257833587|gb|EEV60008.1| GTP-binding protein YqeH [Enterococcus faecium Com12]
gi|257836875|gb|EEV61949.1| GTP-binding protein YqeH [Enterococcus faecium Com15]
gi|292642643|gb|EFF60795.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium PC4.1]
gi|402423043|gb|EJV55263.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX1337RF]
gi|403034406|gb|EJY45858.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 505]
gi|430565063|gb|ELB04233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1590]
gi|430590638|gb|ELB28694.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1861]
gi|430615514|gb|ELB52463.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2620]
gi|430617577|gb|ELB54450.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3083]
gi|430621450|gb|ELB58212.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3548]
Length = 369
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|69245736|ref|ZP_00603602.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO]
gi|257880239|ref|ZP_05659892.1| GTP-binding protein YqeH [Enterococcus faecium 1,230,933]
gi|257885285|ref|ZP_05664938.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,501]
gi|257891377|ref|ZP_05671030.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,410]
gi|257893626|ref|ZP_05673279.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,408]
gi|260560463|ref|ZP_05832637.1| GTP-binding protein YqeH [Enterococcus faecium C68]
gi|261208980|ref|ZP_05923385.1| GTP-binding protein YqeH [Enterococcus faecium TC 6]
gi|289565208|ref|ZP_06445660.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium D344SRF]
gi|293563281|ref|ZP_06677731.1| nitric-oxide synthase [Enterococcus faecium E1162]
gi|294619096|ref|ZP_06698591.1| nitric-oxide synthase [Enterococcus faecium E1679]
gi|314939219|ref|ZP_07846473.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a04]
gi|314942037|ref|ZP_07848895.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133C]
gi|314948390|ref|ZP_07851779.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0082]
gi|314951244|ref|ZP_07854299.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133A]
gi|314991667|ref|ZP_07857137.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133B]
gi|314996793|ref|ZP_07861806.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a01]
gi|383328631|ref|YP_005354515.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium Aus0004]
gi|389868163|ref|YP_006375586.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium DO]
gi|415896213|ref|ZP_11550763.1| nitric-oxide synthase [Enterococcus faecium E4453]
gi|416138301|ref|ZP_11599017.1| nitric-oxide synthase [Enterococcus faecium E4452]
gi|424793013|ref|ZP_18219180.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium V689]
gi|424901319|ref|ZP_18324838.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R497]
gi|424953629|ref|ZP_18368580.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R494]
gi|424963303|ref|ZP_18377537.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1190]
gi|424970373|ref|ZP_18383892.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1139]
gi|424974410|ref|ZP_18387642.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1137]
gi|424979477|ref|ZP_18392326.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1123]
gi|424982654|ref|ZP_18395295.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV99]
gi|424991594|ref|ZP_18403734.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV26]
gi|425007563|ref|ZP_18418686.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV1]
gi|425014430|ref|ZP_18425105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E417]
gi|425019732|ref|ZP_18430073.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C497]
gi|425022790|ref|ZP_18432945.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C1904]
gi|425034138|ref|ZP_18439049.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 514]
gi|425040464|ref|ZP_18444932.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 513]
gi|425043017|ref|ZP_18447289.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 511]
gi|425044850|ref|ZP_18448978.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 510]
gi|425052567|ref|ZP_18456167.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 506]
gi|425059881|ref|ZP_18463197.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 503]
gi|430831715|ref|ZP_19449764.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0333]
gi|430848438|ref|ZP_19466255.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1133]
gi|430850943|ref|ZP_19468699.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1185]
gi|430853384|ref|ZP_19471112.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1258]
gi|430857116|ref|ZP_19474787.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1392]
gi|431301203|ref|ZP_19507522.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1626]
gi|431538220|ref|ZP_19517570.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1731]
gi|431679745|ref|ZP_19524501.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1904]
gi|431749190|ref|ZP_19537934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2297]
gi|431754258|ref|ZP_19542922.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2883]
gi|431769159|ref|ZP_19557585.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1321]
gi|431770242|ref|ZP_19558645.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1644]
gi|431773801|ref|ZP_19562117.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2369]
gi|431779479|ref|ZP_19567674.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4389]
gi|68195629|gb|EAN10069.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO]
gi|257814467|gb|EEV43225.1| GTP-binding protein YqeH [Enterococcus faecium 1,230,933]
gi|257821137|gb|EEV48271.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,501]
gi|257827737|gb|EEV54363.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,410]
gi|257830005|gb|EEV56612.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,408]
gi|260073465|gb|EEW61793.1| GTP-binding protein YqeH [Enterococcus faecium C68]
gi|260077019|gb|EEW64741.1| GTP-binding protein YqeH [Enterococcus faecium TC 6]
gi|289163029|gb|EFD10877.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium D344SRF]
gi|291594757|gb|EFF26139.1| nitric-oxide synthase [Enterococcus faecium E1679]
gi|291604733|gb|EFF34217.1| nitric-oxide synthase [Enterococcus faecium E1162]
gi|313589088|gb|EFR67933.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a01]
gi|313593758|gb|EFR72603.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133B]
gi|313596596|gb|EFR75441.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133A]
gi|313599163|gb|EFR78008.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133C]
gi|313641470|gb|EFS06050.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a04]
gi|313645182|gb|EFS09762.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0082]
gi|364091097|gb|EHM33601.1| nitric-oxide synthase [Enterococcus faecium E4452]
gi|364091181|gb|EHM33679.1| nitric-oxide synthase [Enterococcus faecium E4453]
gi|378938325|gb|AFC63397.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium Aus0004]
gi|388533412|gb|AFK58604.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium DO]
gi|402916877|gb|EJX37709.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium V689]
gi|402930713|gb|EJX50343.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R497]
gi|402938628|gb|EJX57616.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R494]
gi|402949758|gb|EJX67797.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1190]
gi|402956415|gb|EJX73877.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1137]
gi|402957907|gb|EJX75265.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1123]
gi|402960308|gb|EJX77464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV99]
gi|402962021|gb|EJX79003.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1139]
gi|402976381|gb|EJX92277.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV26]
gi|402994712|gb|EJY09225.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV1]
gi|402998680|gb|EJY12924.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E417]
gi|403010909|gb|EJY24250.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C497]
gi|403011880|gb|EJY25159.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C1904]
gi|403012771|gb|EJY25951.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 513]
gi|403021277|gb|EJY33745.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 514]
gi|403021500|gb|EJY33956.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 511]
gi|403028500|gb|EJY40320.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 510]
gi|403033853|gb|EJY45337.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 506]
gi|403043186|gb|EJY54110.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 503]
gi|430481096|gb|ELA58261.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0333]
gi|430534700|gb|ELA75135.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1185]
gi|430534881|gb|ELA75313.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1133]
gi|430540465|gb|ELA80667.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1258]
gi|430542841|gb|ELA82934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1392]
gi|430580393|gb|ELB18860.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1626]
gi|430594762|gb|ELB32725.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1731]
gi|430598810|gb|ELB36538.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1904]
gi|430611952|gb|ELB49019.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2297]
gi|430619865|gb|ELB56677.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2883]
gi|430627934|gb|ELB64398.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1321]
gi|430635135|gb|ELB71233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2369]
gi|430635995|gb|ELB72074.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1644]
gi|430642334|gb|ELB78115.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4389]
Length = 369
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|257883040|ref|ZP_05662693.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,502]
gi|294621391|ref|ZP_06700563.1| nitric-oxide synthase [Enterococcus faecium U0317]
gi|424802804|ref|ZP_18228264.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium S447]
gi|424856100|ref|ZP_18280363.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R499]
gi|424949331|ref|ZP_18365015.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R496]
gi|424957745|ref|ZP_18372453.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R446]
gi|424962572|ref|ZP_18376901.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1986]
gi|424967486|ref|ZP_18381182.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1140]
gi|424997646|ref|ZP_18409392.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV165]
gi|425002928|ref|ZP_18414329.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV161]
gi|425003344|ref|ZP_18414719.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV102]
gi|425010809|ref|ZP_18421741.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E422]
gi|425017430|ref|ZP_18427934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C621]
gi|425033754|ref|ZP_18438701.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 515]
gi|431777226|ref|ZP_19565481.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2560]
gi|431783316|ref|ZP_19571434.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6012]
gi|431785164|ref|ZP_19573195.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6045]
gi|257818698|gb|EEV46026.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,502]
gi|291599038|gb|EFF30083.1| nitric-oxide synthase [Enterococcus faecium U0317]
gi|402919187|gb|EJX39812.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium S447]
gi|402930526|gb|EJX50173.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R499]
gi|402934665|gb|EJX53986.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R496]
gi|402940056|gb|EJX58914.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1986]
gi|402942813|gb|EJX61369.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R446]
gi|402954340|gb|EJX71973.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1140]
gi|402981963|gb|EJX97464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV161]
gi|402985706|gb|EJY00893.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV165]
gi|402992292|gb|EJY07009.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV102]
gi|402998745|gb|EJY12988.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E422]
gi|403004336|gb|EJY18151.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C621]
gi|403008623|gb|EJY22118.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 515]
gi|430639710|gb|ELB75576.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2560]
gi|430645517|gb|ELB81031.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6012]
gi|430648061|gb|ELB83486.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6045]
Length = 369
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|150021499|ref|YP_001306853.1| GTP-binding protein EngA [Thermosipho melanesiensis BI429]
gi|166225930|sp|A6LNG7.1|DER_THEM4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|149794020|gb|ABR31468.1| small GTP-binding protein [Thermosipho melanesiensis BI429]
Length = 437
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 20/86 (23%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCKV 94
V L+G N GKSTLFN L+ + RA +P PGTT + + E+++I
Sbjct: 182 VALIGRPNAGKSTLFNGILERE-----------RALVTPIPGTTRDAIDELVEIN----- 225
Query: 95 KELGKKILLSQVKG-KNMSKTEKKPL 119
GKK L G + SK E K +
Sbjct: 226 ---GKKYLFIDTAGLRRKSKVEYKSI 248
>gi|293571008|ref|ZP_06682051.1| nitric-oxide synthase [Enterococcus faecium E980]
gi|424833434|ref|ZP_18258158.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R501]
gi|424984138|ref|ZP_18396689.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV69]
gi|424987609|ref|ZP_18399980.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV38]
gi|430829410|ref|ZP_19447503.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0269]
gi|430833624|ref|ZP_19451635.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0679]
gi|430836932|ref|ZP_19454908.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0680]
gi|430839014|ref|ZP_19456956.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0688]
gi|430840824|ref|ZP_19458746.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1007]
gi|430859776|ref|ZP_19477385.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1552]
gi|430869739|ref|ZP_19482939.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1575]
gi|431067593|ref|ZP_19494012.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1604]
gi|431099487|ref|ZP_19496653.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1613]
gi|431188241|ref|ZP_19500153.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1620]
gi|431738177|ref|ZP_19527122.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1972]
gi|431741776|ref|ZP_19530677.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2039]
gi|431745631|ref|ZP_19534475.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2134]
gi|291608934|gb|EFF38213.1| nitric-oxide synthase [Enterococcus faecium E980]
gi|402922555|gb|EJX42921.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R501]
gi|402969777|gb|EJX86163.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV69]
gi|402974021|gb|EJX90095.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV38]
gi|430480849|gb|ELA58020.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0269]
gi|430486029|gb|ELA62897.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0679]
gi|430487713|gb|ELA64421.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0680]
gi|430491011|gb|ELA67493.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0688]
gi|430494780|gb|ELA71009.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1007]
gi|430543313|gb|ELA83388.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1552]
gi|430559428|gb|ELA98778.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1575]
gi|430568018|gb|ELB07076.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1604]
gi|430570988|gb|ELB09927.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1613]
gi|430572523|gb|ELB11375.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1620]
gi|430597615|gb|ELB35398.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1972]
gi|430601118|gb|ELB38734.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2039]
gi|430610387|gb|ELB47539.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2134]
Length = 369
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|430827026|ref|ZP_19445194.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0164]
gi|431765842|ref|ZP_19554343.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4215]
gi|430444572|gb|ELA54410.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0164]
gi|430627559|gb|ELB64050.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4215]
Length = 369
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|293556693|ref|ZP_06675257.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1039]
gi|291601155|gb|EFF31443.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1039]
Length = 369
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|270290433|ref|ZP_06196658.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici 7_4]
gi|270281214|gb|EFA27047.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici 7_4]
Length = 369
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N+ + + D+I TTS +PGTTL+ ++
Sbjct: 162 LRGGRDVYVVGVTNVGKSTLINSLIA---LRNGIKDVI---TTSRFPGTTLDRIE 210
>gi|427395311|ref|ZP_18888233.1| ribosome biogenesis GTPase YqeH [Enterococcus durans FB129-CNAB-4]
gi|430862527|ref|ZP_19479844.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1573]
gi|430963077|ref|ZP_19487369.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1576]
gi|431010994|ref|ZP_19489738.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1578]
gi|431263923|ref|ZP_19505811.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1623]
gi|425723811|gb|EKU86697.1| ribosome biogenesis GTPase YqeH [Enterococcus durans FB129-CNAB-4]
gi|430549105|gb|ELA88952.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1573]
gi|430555502|gb|ELA95039.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1576]
gi|430560016|gb|ELA99322.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1578]
gi|430576359|gb|ELB15010.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1623]
Length = 369
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|418068958|ref|ZP_12706238.1| GTPase YqeH [Pediococcus acidilactici MA18/5M]
gi|357537691|gb|EHJ21714.1| GTPase YqeH [Pediococcus acidilactici MA18/5M]
Length = 369
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N+ + + D+I TTS +PGTTL+ ++
Sbjct: 162 LRDGRDVYVVGVTNVGKSTLINSLIA---LRNGIKDVI---TTSRFPGTTLDRIE 210
>gi|425050125|ref|ZP_18453893.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 509]
gi|403024624|gb|EJY36769.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 509]
Length = 369
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|293569277|ref|ZP_06680575.1| nitric-oxide synthase [Enterococcus faecium E1071]
gi|406579805|ref|ZP_11055032.1| GTPase YqeH [Enterococcus sp. GMD4E]
gi|406582233|ref|ZP_11057362.1| GTPase YqeH [Enterococcus sp. GMD3E]
gi|406584274|ref|ZP_11059308.1| GTPase YqeH [Enterococcus sp. GMD2E]
gi|406589173|ref|ZP_11063616.1| GTPase YqeH [Enterococcus sp. GMD1E]
gi|410936072|ref|ZP_11367943.1| GTPase YqeH [Enterococcus sp. GMD5E]
gi|425057709|ref|ZP_18461115.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 504]
gi|430824166|ref|ZP_19442733.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0120]
gi|430844678|ref|ZP_19462575.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1050]
gi|430867479|ref|ZP_19482473.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1574]
gi|431235846|ref|ZP_19503129.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1622]
gi|431382667|ref|ZP_19511260.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1627]
gi|431446124|ref|ZP_19513806.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1630]
gi|431523905|ref|ZP_19516930.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1634]
gi|431743338|ref|ZP_19532218.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2071]
gi|431760682|ref|ZP_19549279.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3346]
gi|447912726|ref|YP_007394138.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecium NRRL B-2354]
gi|291587983|gb|EFF19833.1| nitric-oxide synthase [Enterococcus faecium E1071]
gi|403040021|gb|EJY51128.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 504]
gi|404455024|gb|EKA01896.1| GTPase YqeH [Enterococcus sp. GMD4E]
gi|404458385|gb|EKA04819.1| GTPase YqeH [Enterococcus sp. GMD3E]
gi|404464320|gb|EKA09868.1| GTPase YqeH [Enterococcus sp. GMD2E]
gi|404471251|gb|EKA15801.1| GTPase YqeH [Enterococcus sp. GMD1E]
gi|410735535|gb|EKQ77445.1| GTPase YqeH [Enterococcus sp. GMD5E]
gi|430441550|gb|ELA51647.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0120]
gi|430496109|gb|ELA72214.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1050]
gi|430550490|gb|ELA90286.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1574]
gi|430572783|gb|ELB11629.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1622]
gi|430581038|gb|ELB19485.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1627]
gi|430584863|gb|ELB23177.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1634]
gi|430585768|gb|ELB24040.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1630]
gi|430607172|gb|ELB44500.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2071]
gi|430623767|gb|ELB60445.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3346]
gi|445188435|gb|AGE30077.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecium NRRL B-2354]
Length = 369
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVQDVI---TTSQFPGTTLD 206
>gi|403514618|ref|YP_006655438.1| GTPase YqeH [Lactobacillus helveticus R0052]
gi|403080056|gb|AFR21634.1| GTPase YqeH [Lactobacillus helveticus R0052]
Length = 369
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
S DVY VG TNVGKSTL NA + ++ + TTS +PGTTL+
Sbjct: 164 SQDKDVYFVGTTNVGKSTLINAIIDM------MGNIQNLITTSRFPGTTLD 208
>gi|380032375|ref|YP_004889366.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
WCFS1]
gi|342241618|emb|CCC78852.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
WCFS1]
Length = 378
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N + ++ DLI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINRIIANN---TGLKDLI---TTSRFPGTTLD 212
>gi|335357147|ref|ZP_08549017.1| GTPase YqeH [Lactobacillus animalis KCTC 3501]
Length = 371
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N + DLI TTS +PGTTL+ ++
Sbjct: 168 DVYVVGVTNVGKSTLINRIINQ---TTGVKDLI---TTSRFPGTTLDRIE 211
>gi|392989973|ref|YP_006488566.1| GTPase YqeH [Enterococcus hirae ATCC 9790]
gi|392337393|gb|AFM71675.1| GTPase YqeH [Enterococcus hirae ATCC 9790]
Length = 369
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N +++ D+I TTS +PGTTL+
Sbjct: 166 DVYIVGVTNVGKSTLINQIIKN---TAGVKDVI---TTSQFPGTTLD 206
>gi|254556448|ref|YP_003062865.1| GTP-binding protein YqeH [Lactobacillus plantarum JDM1]
gi|254045375|gb|ACT62168.1| GTP-binding protein YqeH [Lactobacillus plantarum JDM1]
Length = 378
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N + ++ DLI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINRIIANN---TGLKDLI---TTSRFPGTTLD 212
>gi|300767171|ref|ZP_07077083.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180390|ref|YP_003924518.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|418275051|ref|ZP_12890463.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821057|ref|YP_007414219.1| Ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
ZJ316]
gi|300494990|gb|EFK30146.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045881|gb|ADN98424.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|376009522|gb|EHS82850.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274554|gb|AGE39073.1| Ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
ZJ316]
Length = 378
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N + ++ DLI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINRIIANN---TGLKDLI---TTSRFPGTTLD 212
>gi|452822685|gb|EME29702.1| GTP-binding protein [Galdieria sulphuraria]
Length = 547
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 24/75 (32%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLIS------------------------R 68
DVY+VGCTNVGKST N L + + K +L++ +
Sbjct: 279 ADVYVVGCTNVGKSTFINRLLSNTVEKKTGQELLNYLGLKQGQFSLTELKRAFKDKKDPQ 338
Query: 69 ATTSPWPGTTLNLLK 83
TTS +PGTTLN ++
Sbjct: 339 LTTSCFPGTTLNPIR 353
>gi|163848366|ref|YP_001636410.1| tRNA modification GTPase TrmE [Chloroflexus aurantiacus J-10-fl]
gi|222526288|ref|YP_002570759.1| tRNA modification GTPase TrmE [Chloroflexus sp. Y-400-fl]
gi|205829131|sp|A9WKE3.1|MNME_CHLAA RecName: Full=tRNA modification GTPase MnmE
gi|163669655|gb|ABY36021.1| tRNA modification GTPase TrmE [Chloroflexus aurantiacus J-10-fl]
gi|222450167|gb|ACM54433.1| tRNA modification GTPase TrmE [Chloroflexus sp. Y-400-fl]
Length = 452
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Query: 27 LVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
+VL + V LVG NVGKS+L NA L+ + RA +P PGTT + L+E+
Sbjct: 209 MVLRNGARVVLVGRPNVGKSSLLNALLR-----------VERAIVTPIPGTTRDTLEEMA 257
Query: 87 KIQTV 91
+ V
Sbjct: 258 NLAGV 262
>gi|241888775|ref|ZP_04776081.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans ATCC 10379]
gi|241864451|gb|EER68827.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans ATCC 10379]
Length = 372
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L + DVY+VG TNVGKST N L ++ D + TTS +PGTTL +++
Sbjct: 161 LRNGKDVYIVGATNVGKSTFINK-----LIELTTGDK-NVITTSHFPGTTLGMIE 209
>gi|336394026|ref|ZP_08575425.1| GTPase YqeH [Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 373
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ DLI TTS +PGTTL+
Sbjct: 170 DVYVVGVTNVGKSTLINQIIKR---TTGTQDLI---TTSRFPGTTLD 210
>gi|329770262|ref|ZP_08261651.1| ribosome biogenesis GTPase YqeH [Gemella sanguinis M325]
gi|328836966|gb|EGF86612.1| ribosome biogenesis GTPase YqeH [Gemella sanguinis M325]
Length = 372
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L + DVY++G TNVGKST N L ++ + D + TTS +PGTTL +++
Sbjct: 161 LRNGKDVYIIGATNVGKSTFINK-----LIELTSGDK-NVITTSHFPGTTLGMIE 209
>gi|334881686|emb|CCB82584.1| GTPase [Lactobacillus pentosus MP-10]
gi|339636928|emb|CCC15753.1| GTPase [Lactobacillus pentosus IG1]
Length = 378
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N + ++ DLI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINRIIANN---TGLKDLI---TTSRFPGTTLD 212
>gi|379727858|ref|YP_005320043.1| GTP-binding protein YqeH [Melissococcus plutonius DAT561]
gi|376318761|dbj|BAL62548.1| GTP-binding protein YqeH [Melissococcus plutonius DAT561]
Length = 369
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++ + S TTS +PGTTL+ +K
Sbjct: 166 DVYIVGVTNVGKSTLINQIIK------QTSGEEEVITTSQFPGTTLDKIK 209
>gi|333395903|ref|ZP_08477720.1| GTPase YqeH [Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|420146238|ref|ZP_14653668.1| GTP-binding protein [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
gi|398402054|gb|EJN55447.1| GTP-binding protein [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
Length = 373
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ DLI TTS +PGTTL+
Sbjct: 170 DVYVVGVTNVGKSTLINQIIKR---TTGTQDLI---TTSRFPGTTLD 210
>gi|329767815|ref|ZP_08259331.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans M341]
gi|328838916|gb|EGF88510.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans M341]
Length = 372
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L + DVY+VG TNVGKST N L ++ D + TTS +PGTTL +++
Sbjct: 161 LRNGKDVYIVGATNVGKSTFINK-----LIELTTGDK-NVITTSHFPGTTLGMIE 209
>gi|116492472|ref|YP_804207.1| GTP-binding protein YqeH [Pediococcus pentosaceus ATCC 25745]
gi|116102622|gb|ABJ67765.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 370
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N+ + + D+I TTS +PGTTL+ ++
Sbjct: 163 LRKGRDVYVVGVTNVGKSTLINSLIA---IRNGIKDVI---TTSRFPGTTLDRIE 211
>gi|421894614|ref|ZP_16325101.1| ribosome biogenesis GTPase YqeH [Pediococcus pentosaceus IE-3]
gi|385272529|emb|CCG90473.1| ribosome biogenesis GTPase YqeH [Pediococcus pentosaceus IE-3]
Length = 370
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+VG TNVGKSTL N+ + + D+I TTS +PGTTL+ ++
Sbjct: 163 LRKGRDVYVVGVTNVGKSTLINSLIA---IRNGIKDVI---TTSRFPGTTLDRIE 211
>gi|332686084|ref|YP_004455858.1| GTP-binding protein YqeH [Melissococcus plutonius ATCC 35311]
gi|332370093|dbj|BAK21049.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Melissococcus plutonius ATCC 35311]
Length = 369
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKSTL N ++ + S TTS +PGTTL+ +K
Sbjct: 166 DVYIVGVTNVGKSTLINQIIK------QTSGEEEVITTSQFPGTTLDKIK 209
>gi|218960498|ref|YP_001740273.1| tRNA modification GTPase trmE [Candidatus Cloacamonas
acidaminovorans]
gi|167729155|emb|CAO80066.1| tRNA modification GTPase trmE [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 457
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
+ L G NVGKS+LFNA LQ + RA +P PGTT + L+E + +
Sbjct: 223 ICLTGAPNVGKSSLFNALLQQN-----------RAIVTPHPGTTRDYLEEYLSL 265
>gi|365850841|ref|ZP_09391295.1| ribosome biogenesis GTPase YqeH [Lactobacillus parafarraginis
F0439]
gi|363718090|gb|EHM01445.1| ribosome biogenesis GTPase YqeH [Lactobacillus parafarraginis
F0439]
Length = 378
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ +++ + TTS +PGTTL+
Sbjct: 174 DVYVVGVTNVGKSTLINGIIR------QSTGIKELITTSRFPGTTLD 214
>gi|419778100|ref|ZP_14304002.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK10]
gi|383187853|gb|EIC80297.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK10]
Length = 368
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N+ +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINSIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|423335620|ref|ZP_17313395.1| GTPase [Lactobacillus reuteri ATCC 53608]
gi|337728850|emb|CCC03969.1| GTPase [Lactobacillus reuteri ATCC 53608]
Length = 375
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + +LI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIKQ---RTGVKELI---TTSRFPGTTLD 212
>gi|417027615|ref|ZP_11947696.1| GTPase YqeH, partial [Lactobacillus rhamnosus MTCC 5462]
gi|328479668|gb|EGF48839.1| GTPase YqeH [Lactobacillus rhamnosus MTCC 5462]
Length = 71
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ L ++ DLI TTS +PGTTL+
Sbjct: 16 DVYVVGVTNTGKSTLINRIIKQ-LTGVE--DLI---TTSRFPGTTLD 56
>gi|406587446|ref|ZP_11062332.1| GTPase YqeH [Streptococcus sp. GMD1S]
gi|419814222|ref|ZP_14339020.1| GTPase YqeH [Streptococcus sp. GMD2S]
gi|419816835|ref|ZP_14341007.1| GTPase YqeH [Streptococcus sp. GMD4S]
gi|404466599|gb|EKA11917.1| GTPase YqeH [Streptococcus sp. GMD4S]
gi|404472084|gb|EKA16530.1| GTPase YqeH [Streptococcus sp. GMD2S]
gi|404473066|gb|EKA17431.1| GTPase YqeH [Streptococcus sp. GMD1S]
Length = 368
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N+ +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINSIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|148544461|ref|YP_001271831.1| GTP-binding protein YqeH [Lactobacillus reuteri DSM 20016]
gi|184153826|ref|YP_001842167.1| GTP-binding protein YqeH [Lactobacillus reuteri JCM 1112]
gi|227363111|ref|ZP_03847246.1| GTP-binding protein YqeH [Lactobacillus reuteri MM2-3]
gi|325682783|ref|ZP_08162299.1| GTP-binding protein [Lactobacillus reuteri MM4-1A]
gi|148531495|gb|ABQ83494.1| Nitric-oxide synthase [Lactobacillus reuteri DSM 20016]
gi|183225170|dbj|BAG25687.1| GTPase [Lactobacillus reuteri JCM 1112]
gi|227071829|gb|EEI10117.1| GTP-binding protein YqeH [Lactobacillus reuteri MM2-3]
gi|324977133|gb|EGC14084.1| GTP-binding protein [Lactobacillus reuteri MM4-1A]
Length = 375
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + +LI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIKQ---RTGVKELI---TTSRFPGTTLD 212
>gi|407796155|ref|ZP_11143111.1| GTPase YqeH [Salimicrobium sp. MJ3]
gi|407019509|gb|EKE32225.1| GTPase YqeH [Salimicrobium sp. MJ3]
Length = 366
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
S DV++VG TNVGKSTL N + +++ + TTS +PGTTL +
Sbjct: 158 SRKDVFVVGTTNVGKSTLINELIN------RSTGIKDAITTSYFPGTTLGFI 203
>gi|307704298|ref|ZP_07641216.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307622134|gb|EFO01153.1| conserved hypothetical protein [Streptococcus mitis SK597]
Length = 368
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N+ +Q +I + TTS +PGTTL+
Sbjct: 165 DVYVVGVTNVGKSTLINSIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|227543936|ref|ZP_03973985.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|338202609|ref|YP_004648754.1| GTP-binding protein [Lactobacillus reuteri SD2112]
gi|227186087|gb|EEI66158.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|336447849|gb|AEI56464.1| GTP-binding protein [Lactobacillus reuteri SD2112]
Length = 375
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + +LI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIKQ---RTGVKELI---TTSRFPGTTLD 212
>gi|194466643|ref|ZP_03072630.1| Nitric-oxide synthase [Lactobacillus reuteri 100-23]
gi|194453679|gb|EDX42576.1| Nitric-oxide synthase [Lactobacillus reuteri 100-23]
Length = 375
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + +LI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIKQ---RTGVKELI---TTSRFPGTTLD 212
>gi|421768868|ref|ZP_16205578.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP2]
gi|421770979|ref|ZP_16207640.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP3]
gi|411185717|gb|EKS52844.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP2]
gi|411186414|gb|EKS53538.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP3]
Length = 374
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ I DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIKQ---LIGVEDLI---TTSRFPGTTLD 211
>gi|339498294|ref|ZP_08659270.1| GTPase YqeH [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 209
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV++VG TNVGKSTL N ++S + +LI TTS +PGTTL+ ++
Sbjct: 12 DVFVVGVTNVGKSTLINQIIKS---RTGIQNLI---TTSRFPGTTLDRIE 55
>gi|373464479|ref|ZP_09556017.1| ribosome biogenesis GTPase YqeH [Lactobacillus kisonensis F0435]
gi|371762400|gb|EHO50931.1| ribosome biogenesis GTPase YqeH [Lactobacillus kisonensis F0435]
Length = 378
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N+ ++ +++ + TTS +PGTTL+
Sbjct: 174 DVYVVGVTNVGKSTLINSIVR------QSTGIKELITTSRFPGTTLD 214
>gi|116618829|ref|YP_819200.1| GTP-binding protein YqeH [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381337138|ref|YP_005174913.1| GTPase YqeH [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|116097676|gb|ABJ62827.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|356645104|gb|AET30947.1| GTPase YqeH [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 379
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV++VG TNVGKSTL N ++S + +LI TTS +PGTTL+ ++
Sbjct: 180 DVFVVGVTNVGKSTLINQIIKS---RTGIQNLI---TTSRFPGTTLDRIE 223
>gi|338730121|ref|YP_004659513.1| ribosome-associated GTPase EngA [Thermotoga thermarum DSM 5069]
gi|335364472|gb|AEH50417.1| ribosome-associated GTPase EngA [Thermotoga thermarum DSM 5069]
Length = 438
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCKV 94
+ +VG NVGKS+LFNA L+ D RAT + PGTT + + E++ +
Sbjct: 183 IAIVGKPNVGKSSLFNAILKDD-----------RATVTSIPGTTRDPVDELVNFE----- 226
Query: 95 KELGKKILLSQVKG-KNMSKTEKKPLQPQYSLIK 127
GK + G + S+ E K L+ YS+ +
Sbjct: 227 ---GKSYVFIDTAGLRRKSRIEYKSLE-HYSVAR 256
>gi|227431108|ref|ZP_03913166.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227353148|gb|EEJ43316.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 379
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV++VG TNVGKSTL N ++S + +LI TTS +PGTTL+ ++
Sbjct: 180 DVFVVGVTNVGKSTLINQIIKS---RTGIQNLI---TTSRFPGTTLDRIE 223
>gi|256074985|ref|XP_002573802.1| hypothetical protein [Schistosoma mansoni]
gi|360043381|emb|CCD78794.1| hypothetical protein Smp_134940 [Schistosoma mansoni]
Length = 713
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 12/69 (17%)
Query: 26 DLVLS----SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
D +LS S +YL+G TNVGKS+LFN L SDLC L+S +P T +N
Sbjct: 278 DFLLSKRFHSKNPIYLIGSTNVGKSSLFNRLLLSDLCTTMG--LLS------FPLTLMNS 329
Query: 82 LKEIIKIQT 90
K +IQ+
Sbjct: 330 AKRGQRIQS 338
>gi|384485424|gb|EIE77604.1| hypothetical protein RO3G_02308 [Rhizopus delemar RA 99-880]
Length = 259
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 14/61 (22%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLC-----------KIKASDLISRATTSPWPGTTLNLL 82
D+YLVGCTNVGKS L N F+ ++KA +I T+S PGTT+ +
Sbjct: 181 DIYLVGCTNVGKSALVNKFMTQIRGSLDEEGRRLKEQLKAKYMI---TSSAIPGTTMGTI 237
Query: 83 K 83
K
Sbjct: 238 K 238
>gi|225855180|ref|YP_002736692.1| GTP-binding protein YqeH [Streptococcus pneumoniae JJA]
gi|225723024|gb|ACO18877.1| GTP-binding protein [Streptococcus pneumoniae JJA]
Length = 368
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
D Y+VG TNVGKSTL NA +Q +I + TTS +PGTTL+
Sbjct: 165 DAYVVGVTNVGKSTLINAIIQ----EITGDQNV--ITTSRFPGTTLD 205
>gi|317495823|ref|ZP_07954186.1| ribosome biogenesis GTPase YqeH [Gemella morbillorum M424]
gi|316914000|gb|EFV35483.1| ribosome biogenesis GTPase YqeH [Gemella morbillorum M424]
Length = 373
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L + DVY++G TNVGKST N L ++ D + TTS +PGTTL +++
Sbjct: 162 LRNGKDVYIIGATNVGKSTFINK-----LIELTTGDK-NVITTSHFPGTTLGMIE 210
>gi|365925269|ref|ZP_09448032.1| GTPase YqeH [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 372
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + ++LI TTS +PGTTL+
Sbjct: 169 DVYVVGVTNVGKSTLINQIIKQ---QTGINELI---TTSRFPGTTLD 209
>gi|386319137|ref|YP_006015300.1| GTP-binding protein [Staphylococcus pseudintermedius ED99]
gi|323464308|gb|ADX76461.1| GTP-binding protein, putative [Staphylococcus pseudintermedius
ED99]
Length = 366
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKSTL N ++ + + TTS PGTTL+++
Sbjct: 162 DVYIVGTTNVGKSTLINKLIEQTVGEKNV------VTTSRIPGTTLDMI 204
>gi|319892654|ref|YP_004149529.1| GTP-binding protein YqeH [Staphylococcus pseudintermedius HKU10-03]
gi|317162350|gb|ADV05893.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Staphylococcus pseudintermedius HKU10-03]
Length = 366
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
+ DVY+VG TNVGKSTL N ++ + + TTS PGTTL+++
Sbjct: 159 NGQDVYIVGTTNVGKSTLINKLIEQTVGEKNV------VTTSRIPGTTLDMI 204
>gi|406027117|ref|YP_006725949.1| GTP-binding protein [Lactobacillus buchneri CD034]
gi|405125606|gb|AFS00367.1| GTP-binding protein [Lactobacillus buchneri CD034]
Length = 378
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N+ ++ +++ + TTS +PGTTL+
Sbjct: 174 DVYVVGVTNVGKSTLINSIVR------QSTGIKELITTSRFPGTTLD 214
>gi|392531382|ref|ZP_10278519.1| GTPase YqeH [Carnobacterium maltaromaticum ATCC 35586]
Length = 377
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV++VG TNVGKSTL N +++ +D+I TTS +PGTTL+ ++
Sbjct: 173 DVFVVGVTNVGKSTLINQIIKN---TAGVADVI---TTSQFPGTTLDRIE 216
>gi|414083274|ref|YP_006991982.1| ribosome biogenesis GTPase YqeH [Carnobacterium maltaromaticum
LMA28]
gi|412996858|emb|CCO10667.1| ribosome biogenesis GTPase YqeH [Carnobacterium maltaromaticum
LMA28]
Length = 377
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV++VG TNVGKSTL N +++ +D+I TTS +PGTTL+ ++
Sbjct: 173 DVFVVGVTNVGKSTLINQIIKN---TAGVADVI---TTSQFPGTTLDRIE 216
>gi|157931839|gb|ABW04999.1| GTP-binding protein [Lactobacillus reuteri]
Length = 375
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + +LI TTS +PGTTL+
Sbjct: 172 DVYVVGVTNVGKSTLINQIIKQ---RTGVKELI---TTSRFPGTTLD 212
>gi|331701565|ref|YP_004398524.1| ribosome biogenesis GTPase YqeH [Lactobacillus buchneri NRRL
B-30929]
gi|329128908|gb|AEB73461.1| ribosome biogenesis GTPase YqeH [Lactobacillus buchneri NRRL
B-30929]
Length = 378
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N+ ++ +++ + TTS +PGTTL+
Sbjct: 174 DVYVVGVTNVGKSTLINSIVR------QSTGIKELITTSRFPGTTLD 214
>gi|260584202|ref|ZP_05851950.1| ribosome biogenesis GTPase YqeH [Granulicatella elegans ATCC
700633]
gi|260158828|gb|EEW93896.1| ribosome biogenesis GTPase YqeH [Granulicatella elegans ATCC
700633]
Length = 371
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 8/47 (17%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKAS-DLISRATTSPWPGTTL 79
D Y+VG TNVGKSTL N +QS I + D+I TTS +PGTTL
Sbjct: 168 DAYVVGVTNVGKSTLINKLIQS----IGGTKDVI---TTSQFPGTTL 207
>gi|419759618|ref|ZP_14285909.1| GTP-binding protein [Thermosipho africanus H17ap60334]
gi|407515351|gb|EKF50117.1| GTP-binding protein [Thermosipho africanus H17ap60334]
Length = 358
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 12/54 (22%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S D+ +VG TNVGKS+L +AF + T SP+PGTTL ++K
Sbjct: 149 DSKKDILIVGVTNVGKSSLLSAFTK------------EHPTISPFPGTTLGIVK 190
>gi|217077039|ref|YP_002334755.1| GTP-binding protein [Thermosipho africanus TCF52B]
gi|217036892|gb|ACJ75414.1| GTP-binding protein [Thermosipho africanus TCF52B]
Length = 358
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 12/54 (22%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S D+ +VG TNVGKS+L +AF + T SP+PGTTL ++K
Sbjct: 149 DSKKDILIVGVTNVGKSSLLSAFTK------------EHPTISPFPGTTLGIVK 190
>gi|433448806|ref|ZP_20411671.1| GTPase YqeH [Weissella ceti NC36]
gi|429539195|gb|ELA07232.1| GTPase YqeH [Weissella ceti NC36]
Length = 380
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DVY+VG TNVGKST+ N ++ +D+I TTS +PGTTL+ ++
Sbjct: 176 DVYVVGVTNVGKSTMINQIIKD--VTGDQNDVI---TTSRFPGTTLDRIE 220
>gi|281412785|ref|YP_003346864.1| ribosome-associated GTPase EngA [Thermotoga naphthophila RKU-10]
gi|281373888|gb|ADA67450.1| ribosome-associated GTPase EngA [Thermotoga naphthophila RKU-10]
Length = 439
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 21/97 (21%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
++ A V +VG NVGKSTLFNA L + RA SP PGTT + + E + I
Sbjct: 177 ITDAIKVAIVGRPNVGKSTLFNAILNKE-----------RALVSPIPGTTRDPVDEEVFI 225
Query: 89 QTVCKVKELGKKILLSQVKG-KNMSKTEKKPLQPQYS 124
GKK + G + S+ E + ++ +YS
Sbjct: 226 D--------GKKYVFVDTAGLRRRSRVEPRTVE-KYS 253
>gi|257875519|ref|ZP_05655172.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC20]
gi|257809685|gb|EEV38505.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC20]
Length = 372
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + + + TTS +PGTTL+
Sbjct: 169 DVYVVGVTNVGKSTLINQIIK------QTAGINELITTSRFPGTTLD 209
>gi|257865892|ref|ZP_05645545.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC30]
gi|257872225|ref|ZP_05651878.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC10]
gi|257799826|gb|EEV28878.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC30]
gi|257806389|gb|EEV35211.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC10]
Length = 372
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + + + TTS +PGTTL+
Sbjct: 169 DVYVVGVTNVGKSTLINQIIK------QTAGINELITTSRFPGTTLD 209
>gi|163790555|ref|ZP_02184984.1| hypothetical protein CAT7_08240 [Carnobacterium sp. AT7]
gi|159874158|gb|EDP68233.1| hypothetical protein CAT7_08240 [Carnobacterium sp. AT7]
Length = 377
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+V++VG TNVGKSTL N ++S DLI TTS +PGTTL+ ++
Sbjct: 173 NVFVVGVTNVGKSTLINQIIKS---TAGVQDLI---TTSQFPGTTLDRIE 216
>gi|227530476|ref|ZP_03960525.1| GTP-binding protein YqeH [Lactobacillus vaginalis ATCC 49540]
gi|227349581|gb|EEJ39872.1| GTP-binding protein YqeH [Lactobacillus vaginalis ATCC 49540]
Length = 375
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY VG TNVGKSTL N ++ + + + TTS +PGTTL+
Sbjct: 172 DVYFVGVTNVGKSTLVNQIIK------RQTGIKELITTSKFPGTTLD 212
>gi|325569902|ref|ZP_08145896.1| GTP-binding protein [Enterococcus casseliflavus ATCC 12755]
gi|325157025|gb|EGC69193.1| GTP-binding protein [Enterococcus casseliflavus ATCC 12755]
Length = 377
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + + + TTS +PGTTL+
Sbjct: 174 DVYVVGVTNVGKSTLINQIIK------QTAGINELITTSRFPGTTLD 214
>gi|20807454|ref|NP_622625.1| GTP-binding protein Era [Thermoanaerobacter tengcongensis MB4]
gi|25008432|sp|Q8RB50.1|ERA_THETN RecName: Full=GTPase Era
gi|20515979|gb|AAM24229.1| GTPases [Thermoanaerobacter tengcongensis MB4]
Length = 298
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
AG V L+G TNVGKSTL NA L+ + A TSP P TT N ++ I+
Sbjct: 5 AGFVALIGRTNVGKSTLLNAILKEKV-----------AITSPKPQTTRNTIRGIL 48
>gi|420262361|ref|ZP_14765002.1| GTP-binding protein [Enterococcus sp. C1]
gi|394770118|gb|EJF49922.1| GTP-binding protein [Enterococcus sp. C1]
Length = 372
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + + + TTS +PGTTL+
Sbjct: 169 DVYVVGVTNVGKSTLINQIIK------QTAGINELITTSRFPGTTLD 209
>gi|259047030|ref|ZP_05737431.1| ribosome biogenesis protein GTPase YqeH [Granulicatella adiacens
ATCC 49175]
gi|259036349|gb|EEW37604.1| ribosome biogenesis protein GTPase YqeH [Granulicatella adiacens
ATCC 49175]
Length = 375
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
D Y+VG TNVGKSTL N +QS + TTS +PGTTL
Sbjct: 172 DAYVVGVTNVGKSTLINKLIQS------IGETGEVITTSQYPGTTL 211
>gi|408356444|ref|YP_006844975.1| GTP-binding protein [Amphibacillus xylanus NBRC 15112]
gi|407727215|dbj|BAM47213.1| putative GTP-binding protein [Amphibacillus xylanus NBRC 15112]
Length = 369
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKST N + + D I TTS +PGTTL +
Sbjct: 164 DVYVVGSTNVGKSTFINYLIND---SVGTKDAI---TTSYFPGTTLGFI 206
>gi|384914596|ref|ZP_10015380.1| tRNA modification GTPase mnmE [Methylacidiphilum fumariolicum SolV]
gi|384527481|emb|CCG91248.1| tRNA modification GTPase mnmE [Methylacidiphilum fumariolicum SolV]
Length = 441
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
VL + L G NVGKS+LFNA L+ + RA SP PGTT +
Sbjct: 210 VLKEGFTIVLAGSPNVGKSSLFNALLKEN-----------RAIVSPHPGTTRD------T 252
Query: 88 IQTVCKVKELGKKILLSQVKGKNMSKTEKKPLQ 120
I+ C++ KI+ + + +++ + E + ++
Sbjct: 253 IEAECRISSFLVKIVDTAGQRQSVDEIEAEGIR 285
>gi|384085697|ref|ZP_09996872.1| tRNA modification GTPase mnmE [Acidithiobacillus thiooxidans ATCC
19377]
Length = 452
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 11/58 (18%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
L+ G V L G NVGKS+L NA Q D A +P PGTT +LL+E I
Sbjct: 219 LARGGRVILAGRPNVGKSSLMNALAQRD-----------AAIVTPVPGTTRDLLREEI 265
>gi|257869176|ref|ZP_05648829.1| GTP-binding protein YqeH [Enterococcus gallinarum EG2]
gi|357050059|ref|ZP_09111271.1| hypothetical protein HMPREF9478_01254 [Enterococcus saccharolyticus
30_1]
gi|257803340|gb|EEV32162.1| GTP-binding protein YqeH [Enterococcus gallinarum EG2]
gi|355382229|gb|EHG29330.1| hypothetical protein HMPREF9478_01254 [Enterococcus saccharolyticus
30_1]
Length = 370
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ + + + TTS +PGTTL+
Sbjct: 167 DVYVVGVTNVGKSTLINQIIK------QTAGVQELITTSRFPGTTLD 207
>gi|219847583|ref|YP_002462016.1| tRNA modification GTPase TrmE [Chloroflexus aggregans DSM 9485]
gi|219541842|gb|ACL23580.1| tRNA modification GTPase TrmE [Chloroflexus aggregans DSM 9485]
Length = 452
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 27 LVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
+VL + V LVG NVGKS+L NA L+ + RA +P PGTT + L+E
Sbjct: 209 IVLRNGARVALVGRPNVGKSSLLNALLR-----------VERAIVTPIPGTTRDTLEETA 257
Query: 87 KIQTV 91
+ V
Sbjct: 258 NLAGV 262
>gi|23099443|ref|NP_692909.1| GTP-binding protein YqeH [Oceanobacillus iheyensis HTE831]
gi|22777672|dbj|BAC13944.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 366
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV++VG TNVGKST N ++ + A TTS +PGTTL ++
Sbjct: 161 DVFIVGTTNVGKSTFINKLIEQSTGEANA------ITTSYFPGTTLGFIE 204
>gi|256370677|ref|YP_003108502.1| tRNA modification GTPase TrmE [Candidatus Sulcia muelleri SMDSEM]
gi|256009469|gb|ACU52829.1| tRNA modification GTPase TrmE [Candidatus Sulcia muelleri SMDSEM]
Length = 461
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKE 84
V ++GCTNVGKSTLFN L+ + R+ S GTT N ++E
Sbjct: 223 VSIIGCTNVGKSTLFNKILKDE-----------RSIVSNIAGTTRNYIEE 261
>gi|70934171|ref|XP_738352.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514498|emb|CAH86244.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 340
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISR-----ATTSPWPGTTLN 80
D+Y+VGC NVGKS+ N+FL+ K D+ S+ T S P TTLN
Sbjct: 211 DIYIVGCVNVGKSSFLNSFLKFINYK-HIGDIYSKRKKGGVTVSNIPYTTLN 261
>gi|333371748|ref|ZP_08463690.1| GTP-binding protein [Desmospora sp. 8437]
gi|332975677|gb|EGK12563.1| GTP-binding protein [Desmospora sp. 8437]
Length = 367
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 14/92 (15%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL-------KEII 86
DV++ G NVGKSTL N L+ + + + + TTSP+PGTTL+ + +E++
Sbjct: 163 DVFVTGTANVGKSTLINRLLK----EFGSGEEV--ITTSPYPGTTLDTIHIPLEGGRELV 216
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTEKKP 118
+ + + + + + ++ G+ K+E KP
Sbjct: 217 DMPGIVRRDRMSEWVAPDEL-GEITPKSEIKP 247
>gi|366052989|ref|ZP_09450711.1| GTPase YqeH [Lactobacillus suebicus KCTC 3549]
Length = 374
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TNVGKSTL N ++ +LI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNVGKSTLINQIIRQ---TTGVQELI---TTSRFPGTTLD 211
>gi|335429482|ref|ZP_08556380.1| GTPase YqeH [Haloplasma contractile SSD-17B]
gi|334889492|gb|EGM27777.1| GTPase YqeH [Haloplasma contractile SSD-17B]
Length = 369
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+VY+VG TNVGKSTL NA ++ + D I TTS +PGTTL +++
Sbjct: 163 NVYVVGSTNVGKSTLINAIIKR--FTEEEKDYI---TTSYFPGTTLGIIE 207
>gi|449494174|ref|XP_004159469.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein YqeH-like
[Cucumis sativus]
Length = 648
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NA + K +++ T +P PGTTL +L+
Sbjct: 382 GNVWVIGAQNAGKSTLINALAK------KKGXKVTKLTEAPIPGTTLGILR 426
>gi|409997539|ref|YP_006751940.1| hypothetical protein BN194_18740 [Lactobacillus casei W56]
gi|406358551|emb|CCK22821.1| Uncharacterized protein yqeH [Lactobacillus casei W56]
Length = 409
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ +L ++ DLI TTS +PGTTL+
Sbjct: 206 DVYVVGVTNTGKSTLINRIIK-ELTGVE--DLI---TTSRFPGTTLD 246
>gi|392948629|ref|ZP_10314234.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus pentosus
KCA1]
gi|392436134|gb|EIW14053.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus pentosus
KCA1]
Length = 378
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DV++VG TNVGKSTL N + ++ DLI TTS +PGTTL+
Sbjct: 172 DVFVVGVTNVGKSTLINRIIANN---TGLKDLI---TTSRFPGTTLD 212
>gi|427392284|ref|ZP_18886289.1| ribosome biogenesis GTPase YqeH [Alloiococcus otitis ATCC 51267]
gi|425731551|gb|EKU94367.1| ribosome biogenesis GTPase YqeH [Alloiococcus otitis ATCC 51267]
Length = 381
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 26 DLVLSSAGD--VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
DL+ GD VY+VG TNVGKSTL N + AS TTS +PGTTL
Sbjct: 168 DLINEYRGDRDVYIVGTTNVGKSTLINQIINL------ASQEEDVVTTSYFPGTTL 217
>gi|354604877|ref|ZP_09022866.1| tRNA modification GTPase TrmE [Alistipes indistinctus YIT 12060]
gi|353347456|gb|EHB91732.1| tRNA modification GTPase TrmE [Alistipes indistinctus YIT 12060]
Length = 465
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
+L + V +VG NVGKSTL NA L + RA S GTT +L++E I
Sbjct: 218 ILKNGVPVAIVGSPNVGKSTLLNALLNEE-----------RALVSDIAGTTRDLIEETIN 266
Query: 88 IQTV 91
IQ V
Sbjct: 267 IQGV 270
>gi|191638679|ref|YP_001987845.1| GTP-binding protein YqeH [Lactobacillus casei BL23]
gi|190712981|emb|CAQ66987.1| Predicted GTPase [Lactobacillus casei BL23]
Length = 356
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ +L ++ DLI TTS +PGTTL+
Sbjct: 153 DVYVVGVTNTGKSTLINRIIK-ELTGVE--DLI---TTSRFPGTTLD 193
>gi|226499582|ref|NP_001147795.1| IMP dehydrogenase/GMP reductase [Zea mays]
gi|195613790|gb|ACG28725.1| IMP dehydrogenase/GMP reductase [Zea mays]
gi|223944539|gb|ACN26353.1| unknown [Zea mays]
gi|413924785|gb|AFW64717.1| IMP dehydrogenase/GMP reductase [Zea mays]
Length = 668
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 5 PALEGREVILVARPEP--NIVSADLVLSSAG---DVYLVGCTNVGKSTLFNAFLQSDLCK 59
P L+G +I V R N+++ + SAG +V+++G N GKSTL NAF + K
Sbjct: 369 PKLDGVFLISVHRDLAVRNLIT--YIKESAGPRSNVWVIGAQNAGKSTLINAFAKKQGVK 426
Query: 60 IKASDLISRATTSPWPGTTLNLLK 83
I+R T + PGTTL +L+
Sbjct: 427 ------ITRLTEAAVPGTTLGILR 444
>gi|418008288|ref|ZP_12648155.1| GTP-binding protein [Lactobacillus casei UW4]
gi|410546966|gb|EKQ21209.1| GTP-binding protein [Lactobacillus casei UW4]
Length = 374
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ +L ++ DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIK-ELTGVE--DLI---TTSRFPGTTLD 211
>gi|375088310|ref|ZP_09734650.1| ribosome biogenesis GTPase YqeH [Dolosigranulum pigrum ATCC 51524]
gi|374562348|gb|EHR33678.1| ribosome biogenesis GTPase YqeH [Dolosigranulum pigrum ATCC 51524]
Length = 372
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
DVY+VG TNVGKSTL N ++ A+D TTS PGTTL
Sbjct: 167 DVYVVGTTNVGKSTLINQIVKL------ATDQRDLITTSYIPGTTL 206
>gi|418011123|ref|ZP_12650889.1| GTP-binding protein YqeH [Lactobacillus casei Lc-10]
gi|410552760|gb|EKQ26774.1| GTP-binding protein YqeH [Lactobacillus casei Lc-10]
Length = 374
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ +L ++ DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIK-ELTGVE--DLI---TTSRFPGTTLD 211
>gi|384251297|gb|EIE24775.1| hypothetical protein COCSUDRAFT_10321, partial [Coccomyxa
subellipsoidea C-169]
Length = 386
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 1 MELWPALEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKI 60
+EL AL+G V E +V + + GDV++VG N GKS+L NA ++ +
Sbjct: 131 VELVSALKGWGV------EQLLVRLHREVGTTGDVWVVGAQNAGKSSLINAMKRA----V 180
Query: 61 KASDLISRATTSPWPGTTLNLLK 83
+ + TT+ PGTTL +LK
Sbjct: 181 RHGKPRNELTTAALPGTTLGMLK 203
>gi|301066734|ref|YP_003788757.1| GTPase [Lactobacillus casei str. Zhang]
gi|417980881|ref|ZP_12621558.1| GTP-binding protein YqeH [Lactobacillus casei 12A]
gi|417983709|ref|ZP_12624345.1| GTP-binding protein YqeH [Lactobacillus casei 21/1]
gi|300439141|gb|ADK18907.1| Predicted GTPase [Lactobacillus casei str. Zhang]
gi|410523817|gb|EKP98736.1| GTP-binding protein YqeH [Lactobacillus casei 12A]
gi|410527978|gb|EKQ02840.1| GTP-binding protein YqeH [Lactobacillus casei 21/1]
Length = 374
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ +L ++ DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIK-ELTGVE--DLI---TTSRFPGTTLD 211
>gi|239632052|ref|ZP_04675083.1| nitric-oxide synthase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|239526517|gb|EEQ65518.1| nitric-oxide synthase [Lactobacillus paracasei subsp. paracasei
8700:2]
Length = 374
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ +L ++ DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIK-ELTGVE--DLI---TTSRFPGTTLD 211
>gi|227534814|ref|ZP_03964863.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|418002385|ref|ZP_12642504.1| GTP-binding protein YqeH [Lactobacillus casei UCD174]
gi|227187570|gb|EEI67637.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|410544288|gb|EKQ18622.1| GTP-binding protein YqeH [Lactobacillus casei UCD174]
Length = 374
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ +L ++ DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIK-ELTGVE--DLI---TTSRFPGTTLD 211
>gi|302768775|ref|XP_002967807.1| hypothetical protein SELMODRAFT_62387 [Selaginella moellendorffii]
gi|302799922|ref|XP_002981719.1| hypothetical protein SELMODRAFT_52473 [Selaginella moellendorffii]
gi|300150551|gb|EFJ17201.1| hypothetical protein SELMODRAFT_52473 [Selaginella moellendorffii]
gi|300164545|gb|EFJ31154.1| hypothetical protein SELMODRAFT_62387 [Selaginella moellendorffii]
Length = 459
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GDV++VG N GKS+L NA + ++ K + SR T + PGTT+ +LK
Sbjct: 227 GDVWVVGAQNAGKSSLINALARFNVGKHE-----SRLTEAAHPGTTIGILK 272
>gi|229552536|ref|ZP_04441261.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|258539909|ref|YP_003174408.1| GTP-binding protein YqeH [Lactobacillus rhamnosus Lc 705]
gi|385835558|ref|YP_005873332.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC 8530]
gi|229314088|gb|EEN80061.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|257151585|emb|CAR90557.1| GTP-binding protein [Lactobacillus rhamnosus Lc 705]
gi|355395049|gb|AER64479.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC 8530]
Length = 374
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ L ++ DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIKQ-LTGVE--DLI---TTSRFPGTTLD 211
>gi|116495171|ref|YP_806905.1| GTP-binding protein YqeH [Lactobacillus casei ATCC 334]
gi|385820393|ref|YP_005856780.1| hypothetical protein LC2W_1864 [Lactobacillus casei LC2W]
gi|385823580|ref|YP_005859922.1| hypothetical protein LCBD_1885 [Lactobacillus casei BD-II]
gi|417987069|ref|ZP_12627631.1| GTP-binding protein YqeH [Lactobacillus casei 32G]
gi|417989965|ref|ZP_12630460.1| GTP-binding protein YqeH [Lactobacillus casei A2-362]
gi|417993212|ref|ZP_12633561.1| GTP-binding protein YqeH [Lactobacillus casei CRF28]
gi|417996556|ref|ZP_12636835.1| GTP-binding protein YqeH [Lactobacillus casei M36]
gi|417999427|ref|ZP_12639636.1| GTP-binding protein YqeH [Lactobacillus casei T71499]
gi|418005414|ref|ZP_12645407.1| GTP-binding protein YqeH [Lactobacillus casei UW1]
gi|418013175|ref|ZP_12652828.1| GTP-binding protein YqeH [Lactobacillus casei Lpc-37]
gi|116105321|gb|ABJ70463.1| Predicted GTPase [Lactobacillus casei ATCC 334]
gi|327382720|gb|AEA54196.1| hypothetical protein LC2W_1864 [Lactobacillus casei LC2W]
gi|327385907|gb|AEA57381.1| hypothetical protein LCBD_1885 [Lactobacillus casei BD-II]
gi|410524133|gb|EKP99050.1| GTP-binding protein YqeH [Lactobacillus casei 32G]
gi|410531684|gb|EKQ06400.1| GTP-binding protein YqeH [Lactobacillus casei CRF28]
gi|410535402|gb|EKQ10027.1| GTP-binding protein YqeH [Lactobacillus casei M36]
gi|410536787|gb|EKQ11378.1| GTP-binding protein YqeH [Lactobacillus casei A2-362]
gi|410539058|gb|EKQ13596.1| GTP-binding protein YqeH [Lactobacillus casei T71499]
gi|410546811|gb|EKQ21055.1| GTP-binding protein YqeH [Lactobacillus casei UW1]
gi|410556122|gb|EKQ30044.1| GTP-binding protein YqeH [Lactobacillus casei Lpc-37]
Length = 374
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ +L ++ DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIK-ELTGVE--DLI---TTSRFPGTTLD 211
>gi|199597217|ref|ZP_03210649.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|258508733|ref|YP_003171484.1| GTP-binding protein YqeH [Lactobacillus rhamnosus GG]
gi|385828394|ref|YP_005866166.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|199592021|gb|EDZ00096.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|257148660|emb|CAR87633.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|259650039|dbj|BAI42201.1| GTP-binding protein [Lactobacillus rhamnosus GG]
Length = 374
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ L ++ DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIKQ-LTGVE--DLI---TTSRFPGTTLD 211
>gi|418070903|ref|ZP_12708178.1| GTPase YqeH [Lactobacillus rhamnosus R0011]
gi|423078757|ref|ZP_17067434.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC
21052]
gi|357540323|gb|EHJ24340.1| GTPase YqeH [Lactobacillus rhamnosus R0011]
gi|357549045|gb|EHJ30893.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC
21052]
Length = 374
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ L ++ DLI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIKQ-LTGVE--DLI---TTSRFPGTTLD 211
>gi|429205409|ref|ZP_19196686.1| GTPase YqeH [Lactobacillus saerimneri 30a]
gi|428146481|gb|EKW98720.1| GTPase YqeH [Lactobacillus saerimneri 30a]
Length = 369
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
DV +VG TNVGKSTL N ++ +I +LI TTS +PGTTL+ ++
Sbjct: 167 DVQVVGVTNVGKSTLINRIIKQ---RIGIQNLI---TTSRFPGTTLDRIE 210
>gi|332638513|ref|ZP_08417376.1| GTPase YqeH [Weissella cibaria KACC 11862]
Length = 380
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
VY+VG TNVGKSTL N ++ + D+I TTS +PGTTL+ ++
Sbjct: 177 VYVVGVTNVGKSTLINQIIKD--ATGDSKDVI---TTSRFPGTTLDRIE 220
>gi|420160958|ref|ZP_14667729.1| GTP-binding protein [Weissella koreensis KCTC 3621]
gi|394745708|gb|EJF34526.1| GTP-binding protein [Weissella koreensis KCTC 3621]
Length = 380
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 5/49 (10%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
VY+VG TNVGKSTL N ++ D+ K +D+I TTS +PGTTL+ ++
Sbjct: 177 VYVVGVTNVGKSTLINQIIK-DVTGEK-NDVI---TTSRFPGTTLDRIE 220
>gi|339634961|ref|YP_004726602.1| GTPase YqeH [Weissella koreensis KACC 15510]
gi|338854757|gb|AEJ23923.1| GTPase YqeH [Weissella koreensis KACC 15510]
Length = 380
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 5/49 (10%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
VY+VG TNVGKSTL N ++ D+ K +D+I TTS +PGTTL+ ++
Sbjct: 177 VYVVGVTNVGKSTLINQIIK-DVTGEK-NDVI---TTSRFPGTTLDRIE 220
>gi|317128279|ref|YP_004094561.1| ribosome biogenesis GTPase YqeH [Bacillus cellulosilyticus DSM
2522]
gi|315473227|gb|ADU29830.1| ribosome biogenesis GTPase YqeH [Bacillus cellulosilyticus DSM
2522]
Length = 372
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
DVY+VG TNVGKST N L+ + A D TTS PGTTL+++
Sbjct: 166 DVYVVGSTNVGKSTFINRLLK----EFGADDEF-LITTSNIPGTTLDMI 209
>gi|222100021|ref|YP_002534589.1| GTP-binding protein EngA [Thermotoga neapolitana DSM 4359]
gi|254783174|sp|B9K8E0.1|DER_THENN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|221572411|gb|ACM23223.1| GTP-binding protein engA [Thermotoga neapolitana DSM 4359]
Length = 439
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 21/100 (21%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
++ A + +VG NVGKSTLFNA L + RA SP PGTT + + + + I
Sbjct: 177 ITEAIKIAIVGRPNVGKSTLFNAILNKE-----------RALVSPIPGTTRDPVDDEVFI 225
Query: 89 QTVCKVKELGKKILLSQVKG-KNMSKTEKKPLQPQYSLIK 127
GKK + G + S+ E K ++ +YS +
Sbjct: 226 D--------GKKYIFVDTAGLRRKSRIEPKTVE-RYSTYR 256
>gi|241894958|ref|ZP_04782254.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
gi|241871676|gb|EER75427.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
Length = 380
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
VY+VG TNVGKSTL N + K D TTS +PGTTL+ ++
Sbjct: 177 VYVVGVTNVGKSTLINQII-----KEVTGDRTDVITTSRFPGTTLDRIE 220
>gi|451343499|ref|ZP_21912571.1| ribosome biogenesis GTPase YqeH [Eggerthia catenaformis OT 569 =
DSM 20559]
gi|449337862|gb|EMD17018.1| ribosome biogenesis GTPase YqeH [Eggerthia catenaformis OT 569 =
DSM 20559]
Length = 359
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L DVY+ G TNVGKS+ N L+ + T S +PGTTL ++K
Sbjct: 156 LRKGRDVYVTGTTNVGKSSFINGLLKH------YGGIKGFITVSEFPGTTLGMIK 204
>gi|357156842|ref|XP_003577594.1| PREDICTED: ribosome biogenesis GTPase A-like [Brachypodium
distachyon]
Length = 372
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V +VG NVGKS L N+ + + +D I RAT P PG T ++
Sbjct: 136 VMVVGVPNVGKSALINSIHRIARSRFPVNDKIKRATVGPLPGVTQDI 182
>gi|404328442|ref|ZP_10968890.1| GTPase YqeH [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 366
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
D+Y+VG TNVGKST N +++ TTS +PGTTL+ +
Sbjct: 161 DIYVVGVTNVGKSTFINHLIRA------VGQQEGTITTSHFPGTTLDFI 203
>gi|390631126|ref|ZP_10259093.1| Ribosome biogenesis GTPase YqeH [Weissella confusa LBAE C39-2]
gi|390483686|emb|CCF31441.1| Ribosome biogenesis GTPase YqeH [Weissella confusa LBAE C39-2]
Length = 380
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
VY+VG TNVGKSTL N ++ K D+I TTS +PGTTL+ ++
Sbjct: 177 VYVVGVTNVGKSTLINQIIKDATGDNK--DVI---TTSRFPGTTLDRIE 220
>gi|406670355|ref|ZP_11077607.1| ribosome biogenesis GTPase YqeH [Facklamia ignava CCUG 37419]
gi|405579662|gb|EKB53757.1| ribosome biogenesis GTPase YqeH [Facklamia ignava CCUG 37419]
Length = 369
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
++Y+VG TNVGKSTL N +Q + ++I TTS PGTTL++++
Sbjct: 167 NIYIVGITNVGKSTLINQLIQHYGGE---REII---TTSNHPGTTLDMIQ 210
>gi|332800542|ref|YP_004462041.1| tRNA modification GTPase mnmE [Tepidanaerobacter acetatoxydans Re1]
gi|438003951|ref|YP_007273694.1| GTPase and tRNA-U34 5-formylation enzyme TrmE [Tepidanaerobacter
acetatoxydans Re1]
gi|332698277|gb|AEE92734.1| tRNA modification GTPase mnmE [Tepidanaerobacter acetatoxydans Re1]
gi|432180745|emb|CCP27718.1| GTPase and tRNA-U34 5-formylation enzyme TrmE [Tepidanaerobacter
acetatoxydans Re1]
Length = 462
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
+L ++G TNVGKS+L NA LQ + RA + PGTT ++++E I
Sbjct: 220 ILREGLSTLILGNTNVGKSSLLNALLQEE-----------RAIVTDIPGTTRDIIEEYID 268
Query: 88 IQTV 91
IQ +
Sbjct: 269 IQGI 272
>gi|189502543|ref|YP_001958260.1| hypothetical protein Aasi_1201 [Candidatus Amoebophilus asiaticus
5a2]
gi|226704778|sp|B3ETH9.1|MNME_AMOA5 RecName: Full=tRNA modification GTPase MnmE
gi|189497984|gb|ACE06531.1| hypothetical protein Aasi_1201 [Candidatus Amoebophilus asiaticus
5a2]
Length = 455
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 11/61 (18%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
V+ + + +VG NVGKSTL NA LQ + RA SP PGTT + ++ I
Sbjct: 215 VIKNGLPIAIVGKPNVGKSTLLNALLQEE-----------RAIVSPIPGTTRDFIEAEIN 263
Query: 88 I 88
I
Sbjct: 264 I 264
>gi|170289127|ref|YP_001739365.1| GTP-binding protein EngA [Thermotoga sp. RQ2]
gi|238688753|sp|B1LBI4.1|DER_THESQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|170176630|gb|ACB09682.1| small GTP-binding protein [Thermotoga sp. RQ2]
Length = 439
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLI 66
LE + + L ++PE ++ A V +VG NVGKSTLFNA L +
Sbjct: 164 LEEKGLDLESKPE---------ITDAIKVAIVGRPNVGKSTLFNAILNKE---------- 204
Query: 67 SRATTSPWPGTTLNLLKEIIKIQTVCKVKELGKKILLSQVKG-KNMSKTEKKPLQPQYS 124
RA SP PGTT + + E + I GKK + G + S+ E + ++ +YS
Sbjct: 205 -RALVSPIPGTTRDPVDEEVFID--------GKKYVFVDTAGLRRRSRVEPRTVE-KYS 253
>gi|242067315|ref|XP_002448934.1| hypothetical protein SORBIDRAFT_05g001920 [Sorghum bicolor]
gi|241934777|gb|EES07922.1| hypothetical protein SORBIDRAFT_05g001920 [Sorghum bicolor]
Length = 666
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 11/66 (16%)
Query: 21 NIVSADLVLSSAG---DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGT 77
N++S + SAG +V+++G N GKSTL NAF + K I+R T + PGT
Sbjct: 385 NLIS--YIKESAGPRSNVWVIGAQNAGKSTLINAFAKKQGVK------ITRLTEAAVPGT 436
Query: 78 TLNLLK 83
TL +L+
Sbjct: 437 TLGILR 442
>gi|224090037|ref|XP_002308915.1| predicted protein [Populus trichocarpa]
gi|222854891|gb|EEE92438.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL NA + K +++ T +P PGTT+ +L+
Sbjct: 374 GNVWVIGAQNAGKSTLINALAK------KGGAKVTKLTEAPVPGTTVGILR 418
>gi|414885177|tpg|DAA61191.1| TPA: hypothetical protein ZEAMMB73_567116 [Zea mays]
Length = 454
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+ VG NVGKSTL NA + C I ++ A P PGTTL+++K
Sbjct: 318 GNVWAVGARNVGKSTLLNAIARC--CGIVGRPTLTEA---PVPGTTLDVIK 363
>gi|402299808|ref|ZP_10819380.1| hypothetical protein BalcAV_12198 [Bacillus alcalophilus ATCC
27647]
gi|401725017|gb|EJS98332.1| hypothetical protein BalcAV_12198 [Bacillus alcalophilus ATCC
27647]
Length = 350
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 17/75 (22%)
Query: 3 LWPA--LEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCK- 59
LW A ++G+E IL +I + D ++ L+G + VGKSTL NA L++D+ K
Sbjct: 172 LWSAETMDGKEEIL-----EHIDTEDTIV-------LIGSSGVGKSTLINALLEADIQKT 219
Query: 60 --IKASDLISRATTS 72
++A D R TT+
Sbjct: 220 GAVRAEDKRGRHTTT 234
>gi|124810009|ref|XP_001348738.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23497637|gb|AAN37177.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 797
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQ----SDLCKIKASDLISRATTSPWPGTTLN 80
D+Y+VGC NVGKST N+FL+ + I TTS P TTLN
Sbjct: 490 DIYIVGCVNVGKSTFVNSFLKYINYKHIGDIYNKRKKGGVTTSNIPYTTLN 540
>gi|403070192|ref|ZP_10911524.1| GTPase YqeH [Oceanobacillus sp. Ndiop]
Length = 366
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+VY+VG TNVGKST N ++ +++ + TTS +PGTTL ++
Sbjct: 161 NVYIVGTTNVGKSTFINRLIK------QSTGMGEVITTSYFPGTTLGFIE 204
>gi|68005503|ref|XP_670047.1| DNAJ domain protein [Plasmodium berghei strain ANKA]
gi|56484922|emb|CAI03510.1| DNAJ domain protein, putative [Plasmodium berghei]
Length = 225
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISR-----ATTSPWPGTTLN 80
D+Y+VGC NVGKS+ N+FL+ K D+ ++ T S P TTLN
Sbjct: 9 DIYIVGCVNVGKSSFLNSFLKFINYK-HIGDIYNKRKKGGVTVSNIPYTTLN 59
>gi|309791157|ref|ZP_07685689.1| tRNA modification GTPase TrmE [Oscillochloris trichoides DG-6]
gi|308226719|gb|EFO80415.1| tRNA modification GTPase TrmE [Oscillochloris trichoides DG6]
Length = 456
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 3 LWPALEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKA 62
L +LEG E +L + +V LVG NVGKS+L NA L+
Sbjct: 192 LQTSLEGVERLLAG------AAQGIVYRQGARAALVGRPNVGKSSLLNALLR-------- 237
Query: 63 SDLISRATTSPWPGTTLNLLKE 84
+ RA +P PGTT + L+E
Sbjct: 238 ---VQRAIVTPIPGTTRDTLEE 256
>gi|389844125|ref|YP_006346205.1| tRNA modification GTPase TrmE [Mesotoga prima MesG1.Ag.4.2]
gi|387858871|gb|AFK06962.1| tRNA modification GTPase TrmE [Mesotoga prima MesG1.Ag.4.2]
Length = 439
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 27 LVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
+V+S +VG TNVGKSTL NA L+ D RA S PGTT + ++E +
Sbjct: 208 VVISQGIKTAIVGETNVGKSTLLNALLKRD-----------RAIVSEIPGTTRDTIEEDL 256
Query: 87 KIQTV 91
I V
Sbjct: 257 NIGGV 261
>gi|293335703|ref|NP_001168377.1| uncharacterized protein LOC100382146 [Zea mays]
gi|223947863|gb|ACN28015.1| unknown [Zea mays]
gi|414885176|tpg|DAA61190.1| TPA: hypothetical protein ZEAMMB73_567116 [Zea mays]
Length = 585
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+ VG NVGKSTL NA + C I ++ A P PGTTL+++K
Sbjct: 318 GNVWAVGARNVGKSTLLNAIARC--CGIVGRPTLTEA---PVPGTTLDVIK 363
>gi|115468206|ref|NP_001057702.1| Os06g0498900 [Oryza sativa Japonica Group]
gi|52076484|dbj|BAD45363.1| putative GTPase [Oryza sativa Japonica Group]
gi|113595742|dbj|BAF19616.1| Os06g0498900 [Oryza sativa Japonica Group]
gi|125555454|gb|EAZ01060.1| hypothetical protein OsI_23088 [Oryza sativa Indica Group]
gi|215686793|dbj|BAG89643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635637|gb|EEE65769.1| hypothetical protein OsJ_21450 [Oryza sativa Japonica Group]
Length = 681
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+V+++G N GKSTL NAF + K I+R T + PGTTL +L+
Sbjct: 409 NVWVIGAQNAGKSTLINAFAKKQGVK------ITRLTEAAVPGTTLGILR 452
>gi|359782576|ref|ZP_09285796.1| GTP-binding protein YchF [Pseudomonas psychrotolerans L19]
gi|359369396|gb|EHK69967.1| GTP-binding protein YchF [Pseudomonas psychrotolerans L19]
Length = 366
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+VG NVGKSTLFNA QS + C I+ + I P P LN L EI+K +
Sbjct: 7 IVGLPNVGKSTLFNALTQSGIAAENFPFCTIEPNSGI-----VPMPDARLNALAEIVKPE 61
Query: 90 TV 91
V
Sbjct: 62 RV 63
>gi|341821188|emb|CCC57532.1| GTP-binding protein [Weissella thailandensis fsh4-2]
Length = 380
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
VY+VG TNVGKSTL N ++ D+I TTS +PGTTL+ ++
Sbjct: 177 VYVVGVTNVGKSTLINQIIKE--VTGDRDDVI---TTSRFPGTTLDRIE 220
>gi|328868001|gb|EGG16382.1| hypothetical protein DFA_09413 [Dictyostelium fasciculatum]
Length = 704
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 39/88 (44%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASD----------------------------- 64
DV++VGC+NVGKST NA + K++ D
Sbjct: 409 DVFVVGCSNVGKSTFLNALVDEYSNKVEFGDQQEEENGGKKKKNGKQEVKHKEAEPQETP 468
Query: 65 ----------LISRATTSPWPGTTLNLL 82
L SR TTS +PGTTLN++
Sbjct: 469 EKEAERKRKLLASRVTTSIFPGTTLNVI 496
>gi|357161135|ref|XP_003578990.1| PREDICTED: uncharacterized protein LOC100844826 [Brachypodium
distachyon]
Length = 668
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+V+++G N GKSTL NAF + K I+R T + PGTTL +L+
Sbjct: 404 NVWVIGAQNAGKSTLINAFAKKQGVK------ITRLTEAAVPGTTLGILR 447
>gi|403743986|ref|ZP_10953465.1| tRNA modification GTPase TrmE [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122576|gb|EJY56790.1| tRNA modification GTPase TrmE [Alicyclobacillus hesperidum
URH17-3-68]
Length = 471
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 14 LVARPEPNIVSADL--VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATT 71
L+ R + I SA L VL +VG NVGKS+L NA LQ + RA
Sbjct: 213 LLRRIDKLIASAALGRVLREGVATAIVGRPNVGKSSLLNALLQRE-----------RAIV 261
Query: 72 SPWPGTTLNLLKEIIKIQTV 91
+ PGTT ++L+E I ++ +
Sbjct: 262 TDIPGTTRDVLEEYINLRGI 281
>gi|85858983|ref|YP_461185.1| tRNA synthase [Syntrophus aciditrophicus SB]
gi|123516272|sp|Q2LSF6.1|MNME_SYNAS RecName: Full=tRNA modification GTPase MnmE
gi|85722074|gb|ABC77017.1| tRNA synthase [Syntrophus aciditrophicus SB]
Length = 457
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
V V + G N GKS+L N LQ RA +P PGTT + ++E I
Sbjct: 215 VYRHGATVVIAGKPNTGKSSLLNCLLQE-----------KRAIVTPVPGTTRDFIEEAIS 263
Query: 88 IQTV 91
IQ V
Sbjct: 264 IQGV 267
>gi|15644195|ref|NP_229245.1| GTP-binding protein EngA [Thermotoga maritima MSB8]
gi|403253621|ref|ZP_10919922.1| GTP-binding protein Der [Thermotoga sp. EMP]
gi|418045502|ref|ZP_12683597.1| ribosome-associated GTPase EngA [Thermotoga maritima MSB8]
gi|8134441|sp|Q9X1F8.1|DER_THEMA RecName: Full=GTPase Der; Short=TmDer; AltName: Full=GTP-binding
protein EngA
gi|4982010|gb|AAD36514.1|AE001796_6 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351676387|gb|EHA59540.1| ribosome-associated GTPase EngA [Thermotoga maritima MSB8]
gi|402811155|gb|EJX25643.1| GTP-binding protein Der [Thermotoga sp. EMP]
Length = 439
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 21/97 (21%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
++ A V +VG NVGKSTLFNA L + RA SP PGTT + + + + I
Sbjct: 177 ITDAIKVAIVGRPNVGKSTLFNAILNKE-----------RALVSPIPGTTRDPVDDEVFI 225
Query: 89 QTVCKVKELGKKILLSQVKG-KNMSKTEKKPLQPQYS 124
G+K + G + S+ E + ++ +YS
Sbjct: 226 D--------GRKYVFVDTAGLRRKSRVEPRTVE-KYS 253
>gi|30688739|ref|NP_850353.1| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
gi|20466544|gb|AAM20589.1| unknown protein [Arabidopsis thaliana]
gi|23198342|gb|AAN15698.1| unknown protein [Arabidopsis thaliana]
gi|32396052|gb|AAP41843.1| short integuments 2 [Arabidopsis thaliana]
gi|330254920|gb|AEC10014.1| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
Length = 386
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V +VG NVGKS L N+ Q + + + RAT P PG T ++
Sbjct: 139 VMVVGVPNVGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDI 185
>gi|94985925|ref|YP_605289.1| GTP-binding protein Era [Deinococcus geothermalis DSM 11300]
gi|189037266|sp|Q1IXB4.1|ERA_DEIGD RecName: Full=GTPase Era
gi|94556206|gb|ABF46120.1| GTP-binding protein Era [Deinococcus geothermalis DSM 11300]
Length = 309
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+ AG V +VG NVGKSTL NAFL + + A TSP P TT ++ I
Sbjct: 15 THAGFVAIVGKPNVGKSTLLNAFLNTKV-----------APTSPRPQTTRRGVRGIYSTD 63
Query: 90 T 90
T
Sbjct: 64 T 64
>gi|2618702|gb|AAB84349.1| unknown protein [Arabidopsis thaliana]
Length = 391
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V +VG NVGKS L N+ Q + + + RAT P PG T ++
Sbjct: 144 VMVVGVPNVGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDI 190
>gi|372325415|ref|ZP_09520004.1| GTP-binding protein YqeHrequired for biogenesis of 30S ribosome
subunit [Oenococcus kitaharae DSM 17330]
gi|366984223|gb|EHN59622.1| GTP-binding protein YqeHrequired for biogenesis of 30S ribosome
subunit [Oenococcus kitaharae DSM 17330]
Length = 384
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 26 DLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
D L ++Y+VG TNVGKSTL N +++ S S TTS +PGTTL+
Sbjct: 177 DDYLDRYPEIYVVGVTNVGKSTLINQIIKA------LSGKGSVITTSRFPGTTLD 225
>gi|150020690|ref|YP_001306044.1| HSR1-like GTP-binding protein [Thermosipho melanesiensis BI429]
gi|149793211|gb|ABR30659.1| GTP-binding protein, HSR1-related [Thermosipho melanesiensis BI429]
Length = 357
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 12/53 (22%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
D+ ++G TNVGKS+L + F ++ T SP+PGTTL ++K I
Sbjct: 153 DILILGVTNVGKSSLISHFTDAN------------PTISPFPGTTLGIMKRRI 193
>gi|312879308|ref|ZP_07739108.1| tRNA modification GTPase TrmE [Aminomonas paucivorans DSM 12260]
gi|310782599|gb|EFQ22997.1| tRNA modification GTPase TrmE [Aminomonas paucivorans DSM 12260]
Length = 472
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 27 LVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEI 85
++L V LVG NVGKS+L NA LQ +RA +P PGTT +L++ +
Sbjct: 232 MLLREGIRVGLVGRPNVGKSSLLNALLQE-----------ARAIVTPLPGTTRDLVEAV 279
>gi|148270478|ref|YP_001244938.1| GTP-binding protein EngA [Thermotoga petrophila RKU-1]
gi|166225931|sp|A5IMD9.1|DER_THEP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|147736022|gb|ABQ47362.1| small GTP-binding protein [Thermotoga petrophila RKU-1]
Length = 439
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 20/82 (24%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLI 66
LE + + L ++PE ++ A V +VG NVGKSTLFNA L +
Sbjct: 164 LEEKGLDLESKPE---------ITDAIKVAIVGRPNVGKSTLFNAILNKE---------- 204
Query: 67 SRATTSPWPGTTLNLLKEIIKI 88
RA SP PGTT + + E + I
Sbjct: 205 -RALVSPIPGTTRDPVDEEVFI 225
>gi|167522240|ref|XP_001745458.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776416|gb|EDQ90036.1| predicted protein [Monosiga brevicollis MX1]
Length = 469
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 25 ADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK- 83
A+L + +GC+N GKS L NA L RAT SP PGTT L +
Sbjct: 232 AELAQERGQALVFIGCSNAGKSALINAVLSGP----------QRATVSPTPGTTQALQEY 281
Query: 84 EIIKIQTVCKVKELGK 99
E+I Q V +++ + +
Sbjct: 282 ELILDQRVPRLRTVSR 297
>gi|239618515|ref|YP_002941837.1| tRNA modification GTPase TrmE [Kosmotoga olearia TBF 19.5.1]
gi|239507346|gb|ACR80833.1| tRNA modification GTPase TrmE [Kosmotoga olearia TBF 19.5.1]
Length = 440
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 11/55 (20%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+ G TNVGKSTL NA L+ D RA + PGTT + ++E I I +
Sbjct: 217 IAGRTNVGKSTLLNALLRRD-----------RAIVTDIPGTTRDTIEEDISINGI 260
>gi|116620213|ref|YP_822369.1| tRNA modification GTPase TrmE [Candidatus Solibacter usitatus
Ellin6076]
gi|122255446|sp|Q02A42.1|MNME_SOLUE RecName: Full=tRNA modification GTPase MnmE
gi|116223375|gb|ABJ82084.1| tRNA modification GTPase trmE [Candidatus Solibacter usitatus
Ellin6076]
Length = 444
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 3 LWPALEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKA 62
L P LEG E + + +V L L+ +VG NVGKS+LFN L+ D
Sbjct: 193 LSPVLEGTERLAASFQYGGLVHQGLTLA------IVGRPNVGKSSLFNRLLEQD------ 240
Query: 63 SDLISRATTSPWPGTTLNLLKEIIKI 88
RA + PGTT +++ E I
Sbjct: 241 -----RAIVTEIPGTTRDVVSETAAI 261
>gi|297824129|ref|XP_002879947.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
gi|297325786|gb|EFH56206.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
Length = 386
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V +VG NVGKS L N+ Q + + + RAT P PG T ++
Sbjct: 139 VMVVGVPNVGKSALINSVHQIAAARFPVQERLKRATVGPLPGVTQDI 185
>gi|134301153|ref|YP_001114649.1| tRNA modification GTPase TrmE [Desulfotomaculum reducens MI-1]
gi|189036201|sp|A4J9S1.1|MNME_DESRM RecName: Full=tRNA modification GTPase MnmE
gi|134053853|gb|ABO51824.1| tRNA modification GTPase trmE [Desulfotomaculum reducens MI-1]
Length = 461
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 18/72 (25%)
Query: 27 LVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
L + G +Y +VG NVGKS+L NA L RA + PGTT
Sbjct: 210 LAYADTGKIYREGLKTVIVGKPNVGKSSLLNALLHE-----------QRAIVTDIPGTTR 258
Query: 80 NLLKEIIKIQTV 91
++++EI+ I+ V
Sbjct: 259 DVIEEILSIKGV 270
>gi|269122893|ref|YP_003305470.1| tRNA modification GTPase TrmE [Streptobacillus moniliformis DSM
12112]
gi|268314219|gb|ACZ00593.1| tRNA modification GTPase TrmE [Streptobacillus moniliformis DSM
12112]
Length = 455
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+VG NVGKSTL N LQ + RA + PGTT ++++EII I+ +
Sbjct: 223 IVGKPNVGKSTLLNTLLQEE-----------RAIVTSVPGTTRDVIEEIINIKGI 266
>gi|366085737|ref|ZP_09452222.1| GTPase YqeH [Lactobacillus zeae KCTC 3804]
Length = 374
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
DVY+VG TN GKSTL N ++ +L ++ +LI TTS +PGTTL+
Sbjct: 171 DVYVVGVTNTGKSTLINRIIK-ELTGVE--NLI---TTSRFPGTTLD 211
>gi|395225620|ref|ZP_10404139.1| ribosome-associated GTPase EngA [Thiovulum sp. ES]
gi|394446243|gb|EJF07081.1| ribosome-associated GTPase EngA [Thiovulum sp. ES]
Length = 451
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 9 GREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISR 68
G + ++V R + I + + L S V ++G NVGKS+L NA +SD R
Sbjct: 161 GNQKVIVDRFD-RIETKGIQLESEISVSIIGRVNVGKSSLLNAITKSD-----------R 208
Query: 69 ATTSPWPGTTLNLLKEIIKI 88
+ SP GTT++ + E+ +I
Sbjct: 209 SIVSPVAGTTIDPIDEVFQI 228
>gi|359481892|ref|XP_002274571.2| PREDICTED: uncharacterized protein yqeH-like [Vitis vinifera]
Length = 641
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL N F + + K +++ T + PGTTL +L+
Sbjct: 375 GNVWVIGSQNAGKSTLINTFAKREGVK------LTKLTEAAVPGTTLGILR 419
>gi|189426684|ref|YP_001953861.1| tRNA modification GTPase TrmE [Geobacter lovleyi SZ]
gi|189422943|gb|ACD97341.1| tRNA modification GTPase TrmE [Geobacter lovleyi SZ]
Length = 460
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
VL V L+G N GKS+L NA +D RA S PGTT +L++E +
Sbjct: 219 VLRDGVSVLLLGLPNAGKSSLLNALSGTD-----------RAIVSALPGTTRDLIEETVS 267
Query: 88 IQ 89
+Q
Sbjct: 268 LQ 269
>gi|374313757|ref|YP_005060187.1| tRNA modification GTPase TrmE [Granulicella mallensis MP5ACTX8]
gi|358755767|gb|AEU39157.1| tRNA modification GTPase TrmE [Granulicella mallensis MP5ACTX8]
Length = 506
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKE 84
+L S + LVG N GKS+LFN L+ D RA +P PGTT + ++E
Sbjct: 225 MLRSGASLALVGRPNAGKSSLFNRLLERD-----------RAIVTPLPGTTRDTVEE 270
>gi|157364447|ref|YP_001471214.1| HSR1-like GTP-binding protein [Thermotoga lettingae TMO]
gi|157315051|gb|ABV34150.1| GTP-binding protein HSR1-related [Thermotoga lettingae TMO]
Length = 367
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 12/59 (20%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
LS +V VG TNVGKS++F D+ +P+PGTTL+L+K +K
Sbjct: 152 LSLYENVIFVGMTNVGKSSIFQKLTGVDV------------NVTPFPGTTLDLIKATVK 198
>gi|385808598|ref|YP_005844994.1| GTPase [Ignavibacterium album JCM 16511]
gi|383800646|gb|AFH47726.1| Putative GTPase [Ignavibacterium album JCM 16511]
Length = 450
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
V+ +V LVG NVGKS++ N FL+ SR+ S PGTT ++++E I
Sbjct: 216 VIRDGVNVALVGKPNVGKSSILNYFLKE-----------SRSIVSEIPGTTRDIIREEIS 264
Query: 88 IQTV 91
I+ +
Sbjct: 265 IEGI 268
>gi|297739886|emb|CBI30068.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+++G N GKSTL N F + + K +++ T + PGTTL +L+
Sbjct: 371 GNVWVIGSQNAGKSTLINTFAKREGVK------LTKLTEAAVPGTTLGILR 415
>gi|374851300|dbj|BAL54264.1| tRNA modification GTPase [uncultured planctomycete]
Length = 474
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEI 85
V LVG N GKSTLFNA L ++ RA SP PGTT + L +
Sbjct: 223 VVLVGPPNAGKSTLFNALLSAE-----------RAIVSPVPGTTRDYLTAV 262
>gi|223973159|gb|ACN30767.1| unknown [Zea mays]
Length = 369
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+ LVG NVGKS L N+ + + A D RAT P PG T ++ I Q
Sbjct: 136 IMLVGVPNVGKSALINSIHRIATSRFPAKDKNKRATVGPLPGVTQDIAGYKIATQ 190
>gi|84999858|ref|XP_954650.1| GTPase [Theileria annulata]
gi|65305648|emb|CAI73973.1| GTPase, putative [Theileria annulata]
Length = 550
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDL------ISRATTSPWPGTTLNLLK 83
++Y+VG TNVGKST N FL D K K + T S PGTTL ++
Sbjct: 337 NIYVVGATNVGKSTFVNRFL--DFIKYKHVGTLNLRRSVGGTTRSAIPGTTLEFIE 390
>gi|414871397|tpg|DAA49954.1| TPA: GTPase family protein [Zea mays]
Length = 368
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+ LVG NVGKS L N+ + + A D RAT P PG T ++ I Q
Sbjct: 136 IMLVGVPNVGKSALINSIHRIATSRFPAKDKNKRATVGPLPGVTQDIAGYKIATQ 190
>gi|226499776|ref|NP_001151234.1| GTPase family protein [Zea mays]
gi|195645228|gb|ACG42082.1| GTPase family protein [Zea mays]
Length = 369
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+ LVG NVGKS L N+ + + A D RAT P PG T ++ I Q
Sbjct: 136 IMLVGVPNVGKSALINSIHRIATSRFPAKDKNKRATVGPLPGVTQDIAGYKIATQ 190
>gi|357419650|ref|YP_004932642.1| tRNA modification GTPase TrmE [Thermovirga lienii DSM 17291]
gi|355397116|gb|AER66545.1| tRNA modification GTPase TrmE [Thermovirga lienii DSM 17291]
Length = 455
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 11/52 (21%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
V LVG NVGKS+L NAFL SRA + PGTT ++++E++
Sbjct: 222 VALVGRPNVGKSSLLNAFLNE-----------SRAIVTAIPGTTRDIIEEVL 262
>gi|28373695|pdb|1MKY|A Chain A, Structural Analysis Of The Domain Interactions In Der, A
Switch Protein Containing Two Gtpase Domains
Length = 439
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 20/72 (27%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLI 66
LE + + L ++PE ++ A V +VG NVGKSTLFNA L +
Sbjct: 164 LEEKGLDLESKPE---------ITDAIKVAIVGRPNVGKSTLFNAILNKE---------- 204
Query: 67 SRATTSPWPGTT 78
RA SP PGTT
Sbjct: 205 -RALVSPIPGTT 215
>gi|406981302|gb|EKE02795.1| hypothetical protein ACD_20C00330G0009 [uncultured bacterium]
Length = 467
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 21 NIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
N S ++ V +VG NVGKS+LFN+ L I R+ + PGTT +
Sbjct: 222 NTASTSNLMRYGLKVAIVGKPNVGKSSLFNSLLN-----------IERSIVTNIPGTTRD 270
Query: 81 LLKEIIKIQTV 91
+++E+I I V
Sbjct: 271 IIQEVIDIGGV 281
>gi|297584672|ref|YP_003700452.1| ribosome biogenesis GTPase YqeH [Bacillus selenitireducens MLS10]
gi|297143129|gb|ADH99886.1| ribosome biogenesis GTPase YqeH [Bacillus selenitireducens MLS10]
Length = 373
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 24 SADLV--LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+ADL+ + DV++ G TN GKST N L+ + A+D + TTS PGTTL++
Sbjct: 155 AADLIEEYRNGKDVFIAGSTNTGKSTFINRLLK----EYGAADEL-MITTSNIPGTTLDM 209
Query: 82 L 82
+
Sbjct: 210 I 210
>gi|313884889|ref|ZP_07818641.1| ribosome biogenesis GTPase YqeH [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619580|gb|EFR31017.1| ribosome biogenesis GTPase YqeH [Eremococcus coleocola
ACS-139-V-Col8]
Length = 375
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
++Y VG TNVGKS++ N L+ DL +A +LI TTS PGTTL ++
Sbjct: 174 NIYTVGVTNVGKSSVINHVLK-DLG--EADNLI---TTSAMPGTTLEFIE 217
>gi|225441868|ref|XP_002284232.1| PREDICTED: mitochondrial GTPase 1 isoform 2 [Vitis vinifera]
Length = 377
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V +VG NVGKS L N+ Q + + + RAT P PG T ++
Sbjct: 138 VMVVGVPNVGKSALINSIHQIATSRFPVQEKMKRATVGPLPGVTQDI 184
>gi|334342404|ref|YP_004547384.1| tRNA modification GTPase TrmE [Desulfotomaculum ruminis DSM 2154]
gi|334093758|gb|AEG62098.1| tRNA modification GTPase TrmE [Desulfotomaculum ruminis DSM 2154]
Length = 461
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+VG NVGKS+L NA L+ RA + PGTT ++++E+I I+ +
Sbjct: 227 IVGKPNVGKSSLLNALLRE-----------QRAIVTEIPGTTRDIIEEVINIRGI 270
>gi|409197612|ref|ZP_11226275.1| tRNA modification GTPase TrmE [Marinilabilia salmonicolor JCM
21150]
Length = 470
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 25/87 (28%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ----- 89
V +VG TN GKSTL NA LQ + RA S GTT +++++++ I+
Sbjct: 225 VAIVGHTNAGKSTLLNALLQEE-----------RAIVSDVHGTTRDVIEDVMNIEGITFR 273
Query: 90 ---------TVCKVKELGKKILLSQVK 107
T+ KV+ +G + S++K
Sbjct: 274 FIDTAGIRDTIDKVESMGIALTYSKIK 300
>gi|326516022|dbj|BAJ88034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 370
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V +VG NVGKS L NA + + +D I RA P PG T ++
Sbjct: 136 VMVVGVPNVGKSALINAIHRIANSRFPVNDKIKRARVGPLPGVTQDI 182
>gi|384136989|ref|YP_005519703.1| tRNA modification GTPase TrmE [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339291074|gb|AEJ45184.1| tRNA modification GTPase TrmE [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 465
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 22 IVSADL--VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
I SA+L VL +VG NVGKS+L NA ++ D RA + PGTT
Sbjct: 215 IRSAELGRVLRDGVATAIVGRPNVGKSSLLNALVERD-----------RAIVTDLPGTTR 263
Query: 80 NLLKEIIKIQTV 91
++L+E I ++ +
Sbjct: 264 DVLEEYINLRGI 275
>gi|218291088|ref|ZP_03495111.1| tRNA modification GTPase TrmE [Alicyclobacillus acidocaldarius
LAA1]
gi|218238973|gb|EED06180.1| tRNA modification GTPase TrmE [Alicyclobacillus acidocaldarius
LAA1]
Length = 465
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 22 IVSADL--VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
I SA+L VL +VG NVGKS+L NA ++ D RA + PGTT
Sbjct: 215 IRSAELGRVLRDGVATAIVGRPNVGKSSLLNALVERD-----------RAIVTDLPGTTR 263
Query: 80 NLLKEIIKIQTV 91
++L+E I ++ +
Sbjct: 264 DVLEEYINLRGI 275
>gi|229918235|ref|YP_002886881.1| GTP-binding protein YqeH [Exiguobacterium sp. AT1b]
gi|229469664|gb|ACQ71436.1| Nitric-oxide synthase [Exiguobacterium sp. AT1b]
Length = 370
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 13/49 (26%)
Query: 34 DVYLVGCTNVGKSTLFNA----FLQSDLCKIKASDLISRATTSPWPGTT 78
DV++VGCTNVGKSTL N F + D I T S +PGTT
Sbjct: 163 DVFVVGCTNVGKSTLINQVIKRFGEEDEAII---------TVSHFPGTT 202
>gi|225441866|ref|XP_002284228.1| PREDICTED: mitochondrial GTPase 1 isoform 1 [Vitis vinifera]
Length = 376
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V +VG NVGKS L N+ Q + + + RAT P PG T ++
Sbjct: 137 VMVVGVPNVGKSALINSIHQIATSRFPVQEKMKRATVGPLPGVTQDI 183
>gi|118586522|ref|ZP_01543965.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
gi|118433026|gb|EAV39749.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
Length = 497
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
++++VG TNVGKSTL N ++ + S S TTS +PGTTL+
Sbjct: 185 EIFVVGVTNVGKSTLINQIIK------QISGRGSVITTSRFPGTTLD 225
>gi|242044516|ref|XP_002460129.1| hypothetical protein SORBIDRAFT_02g023120 [Sorghum bicolor]
gi|241923506|gb|EER96650.1| hypothetical protein SORBIDRAFT_02g023120 [Sorghum bicolor]
Length = 597
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 9/53 (16%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA--TTSPWPGTTLNLLK 83
G+V+ VG NVGKSTL NA + S + R T +P PGTTL+++K
Sbjct: 318 GNVWAVGARNVGKSTLLNAI-------ARCSGIAGRPTLTEAPVPGTTLDVIK 363
>gi|28209869|ref|NP_780813.1| tRNA modification GTPase TrmE [Clostridium tetani E88]
gi|32171803|sp|Q899S2.1|MNME_CLOTE RecName: Full=tRNA modification GTPase MnmE
gi|28202304|gb|AAO34750.1| thiophene and furan oxidation protein thdF [Clostridium tetani E88]
Length = 459
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 11/58 (18%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
DV +VG NVGKS+L NA L RA + PGTT ++++E I + +
Sbjct: 225 DVVIVGKPNVGKSSLLNALLSE-----------KRAIVTEIPGTTRDVIEEYINLDGI 271
>gi|297739639|emb|CBI29821.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V +VG NVGKS L N+ Q + + + RAT P PG T ++
Sbjct: 123 VMVVGVPNVGKSALINSIHQIATSRFPVQEKMKRATVGPLPGVTQDI 169
>gi|452994694|emb|CCQ93697.1| GTPase involved in ribosome 30S assembly [Clostridium ultunense
Esp]
Length = 385
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+VY +G TNVGKST N L K TTS +PGTTL+L++
Sbjct: 178 NVYFIGATNVGKSTFMNRLL-----KEYGEKGTIEITTSRFPGTTLDLIE 222
>gi|429328803|gb|AFZ80563.1| hypothetical protein BEWA_034200 [Babesia equi]
Length = 569
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
++Y+VG TNVGKST N FL D + + T S PGTTL ++
Sbjct: 341 NIYVVGATNVGKSTFVNRFL--DFIQYN----VGGTTRSAIPGTTLEFIE 384
>gi|338176586|ref|YP_004653396.1| tRNA modification GTPase mnmE [Parachlamydia acanthamoebae UV-7]
gi|336480944|emb|CCB87542.1| tRNA modification GTPase mnmE [Parachlamydia acanthamoebae UV-7]
Length = 457
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 11/61 (18%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
+L + L+GC NVGKS+L NA L D RA S GTT ++L++ +K
Sbjct: 221 ILRDGVSLCLIGCPNVGKSSLMNALLGKD-----------RAIVSAIAGTTRDILEDHLK 269
Query: 88 I 88
+
Sbjct: 270 L 270
>gi|414871398|tpg|DAA49955.1| TPA: GTPase family protein, mRNA [Zea mays]
Length = 373
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+ LVG NVGKS L N+ + + A D RAT P PG T ++ I Q
Sbjct: 136 IMLVGVPNVGKSALINSIHRIATSRFPAKDKNKRATVGPLPGVTQDIAGYKIATQ 190
>gi|282889533|ref|ZP_06298075.1| hypothetical protein pah_c001o004 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500546|gb|EFB42823.1| hypothetical protein pah_c001o004 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 476
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 11/61 (18%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
+L + L+GC NVGKS+L NA L D RA S GTT ++L++ +K
Sbjct: 240 ILRDGVSLCLIGCPNVGKSSLMNALLGKD-----------RAIVSAIAGTTRDILEDHLK 288
Query: 88 I 88
+
Sbjct: 289 L 289
>gi|224057138|ref|XP_002299138.1| predicted protein [Populus trichocarpa]
gi|222846396|gb|EEE83943.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G V+ VG N GKSTL NA + C +S T +P PGTTL +++
Sbjct: 320 GHVWAVGAQNAGKSTLLNAMAK---CVGGNERKVSYLTEAPVPGTTLGIVR 367
>gi|288819136|ref|YP_003433484.1| tRNA modification GTPase [Hydrogenobacter thermophilus TK-6]
gi|384129883|ref|YP_005512496.1| tRNA modification GTPase TrmE [Hydrogenobacter thermophilus TK-6]
gi|288788536|dbj|BAI70283.1| tRNA modification GTPase [Hydrogenobacter thermophilus TK-6]
gi|308752720|gb|ADO46203.1| tRNA modification GTPase TrmE [Hydrogenobacter thermophilus TK-6]
Length = 450
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 23 VSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
V A +L ++ +VG NVGKS+LFNA L + RA + PGTT + L
Sbjct: 209 VKAGELLRKGINLAIVGKPNVGKSSLFNALLGRE-----------RAIVTEVPGTTRDFL 257
Query: 83 KEIIKIQTV 91
E + ++ V
Sbjct: 258 SEELHMEGV 266
>gi|421193547|ref|ZP_15650793.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB553]
gi|399971706|gb|EJO05945.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB553]
Length = 385
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
++++VG TNVGKSTL N ++ + S S TTS +PGTTL+
Sbjct: 185 EIFVVGVTNVGKSTLINQIIK------QISGRGSVITTSRFPGTTLD 225
>gi|449105346|ref|ZP_21742050.1| tRNA modification GTPase mnmE [Treponema denticola ASLM]
gi|451969650|ref|ZP_21922879.1| tRNA modification GTPase mnmE [Treponema denticola US-Trep]
gi|448967049|gb|EMB47691.1| tRNA modification GTPase mnmE [Treponema denticola ASLM]
gi|451701747|gb|EMD56208.1| tRNA modification GTPase mnmE [Treponema denticola US-Trep]
Length = 472
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 AAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|449127798|ref|ZP_21764069.1| tRNA modification GTPase mnmE [Treponema denticola SP33]
gi|448943632|gb|EMB24520.1| tRNA modification GTPase mnmE [Treponema denticola SP33]
Length = 472
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 AAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|30468066|ref|NP_848953.1| tRNA modification GTPase [Cyanidioschyzon merolae strain 10D]
gi|75272287|sp|Q85FG3.1|MNME_CYAME RecName: Full=Probable tRNA modification GTPase mnmE
gi|30409166|dbj|BAC76115.1| tRNA modification GTPase (chloroplast) [Cyanidioschyzon merolae
strain 10D]
Length = 446
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC-- 92
V L+G N GKSTLFNA + + R+ +P GTT ++++ ++ Q +C
Sbjct: 221 VALLGPANAGKSTLFNALIGEE-----------RSIVTPIAGTTTDVVEATLQWQQICFR 269
Query: 93 KVKELGKKILLSQVKGKNMSKTEK 116
G K S+++ K M+K ++
Sbjct: 270 FFDTAGLKEASSEIETKAMAKAQQ 293
>gi|350546553|ref|ZP_08915935.1| ATP/GTP-binding protein [Mycoplasma iowae 695]
gi|349503893|gb|EGZ31454.1| ATP/GTP-binding protein [Mycoplasma iowae 695]
Length = 362
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 36 YLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
Y+ G TN GKS+L NA L+ + K +L+ T SP+ TTLNL K +I+ T+
Sbjct: 162 YVFGKTNTGKSSLINALLRLN----KEKELL---TVSPYKNTTLNLSKILIEKNTI 210
>gi|449104612|ref|ZP_21741351.1| tRNA modification GTPase mnmE [Treponema denticola AL-2]
gi|448963085|gb|EMB43768.1| tRNA modification GTPase mnmE [Treponema denticola AL-2]
Length = 472
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 AAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|449129247|ref|ZP_21765478.1| tRNA modification GTPase mnmE [Treponema denticola SP37]
gi|448946089|gb|EMB26954.1| tRNA modification GTPase mnmE [Treponema denticola SP37]
Length = 472
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 AAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|359409904|ref|ZP_09202369.1| tRNA modification GTPase mnmE [Clostridium sp. DL-VIII]
gi|357168788|gb|EHI96962.1| tRNA modification GTPase mnmE [Clostridium sp. DL-VIII]
Length = 460
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
V +VG NVGKS+L NA L+ RA + PGTT ++++E I I+ +
Sbjct: 229 VVIVGKPNVGKSSLLNALLRE-----------KRAIVTDIPGTTRDVIEEYINIEGI 274
>gi|336322306|ref|YP_004602273.1| tRNA modification GTPase mnmE [Flexistipes sinusarabici DSM 4947]
gi|336105887|gb|AEI13705.1| tRNA modification GTPase mnmE [Flexistipes sinusarabici DSM 4947]
Length = 452
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 11/57 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+ +VG NVGKS+L N+ L+ + RA S PGTT + ++E+I I+ +
Sbjct: 223 IVIVGKPNVGKSSLLNSLLEEE-----------RAIVSEIPGTTRDFIEEVISIKGI 268
>gi|422341532|ref|ZP_16422473.1| tRNA modification GTPase mnmE [Treponema denticola F0402]
gi|325475103|gb|EGC78289.1| tRNA modification GTPase mnmE [Treponema denticola F0402]
Length = 472
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 AAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|116490944|ref|YP_810488.1| GTP-binding protein YqeH [Oenococcus oeni PSU-1]
gi|290890418|ref|ZP_06553493.1| hypothetical protein AWRIB429_0883 [Oenococcus oeni AWRIB429]
gi|419758907|ref|ZP_14285219.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB304]
gi|419857813|ref|ZP_14380516.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB202]
gi|421185344|ref|ZP_15642755.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB318]
gi|421188821|ref|ZP_15646153.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB419]
gi|421189610|ref|ZP_15646924.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB422]
gi|421190931|ref|ZP_15648215.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB548]
gi|421195410|ref|ZP_15652618.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB568]
gi|421197523|ref|ZP_15654698.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB576]
gi|116091669|gb|ABJ56823.1| Predicted GTPase [Oenococcus oeni PSU-1]
gi|290479814|gb|EFD88463.1| hypothetical protein AWRIB429_0883 [Oenococcus oeni AWRIB429]
gi|399904362|gb|EJN91818.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB304]
gi|399964154|gb|EJN98808.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB419]
gi|399964525|gb|EJN99166.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB318]
gi|399972700|gb|EJO06899.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB422]
gi|399973627|gb|EJO07792.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB548]
gi|399975132|gb|EJO09200.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB576]
gi|399975835|gb|EJO09870.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB568]
gi|410497284|gb|EKP88759.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB202]
Length = 385
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
++++VG TNVGKSTL N ++ + S S TTS +PGTTL+
Sbjct: 185 EIFVVGVTNVGKSTLINQIIK------QISGRGSVITTSRFPGTTLD 225
>gi|449108799|ref|ZP_21745440.1| tRNA modification GTPase mnmE [Treponema denticola ATCC 33520]
gi|448961074|gb|EMB41782.1| tRNA modification GTPase mnmE [Treponema denticola ATCC 33520]
Length = 472
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 AAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|419859605|ref|ZP_14382259.1| GTP-binding protein YqeH [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410496622|gb|EKP88105.1| GTP-binding protein YqeH [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 385
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
++++VG TNVGKSTL N ++ + S S TTS +PGTTL+
Sbjct: 185 EIFVVGVTNVGKSTLINQIIK------QISGRGSVITTSRFPGTTLD 225
>gi|449119488|ref|ZP_21755884.1| tRNA modification GTPase mnmE [Treponema denticola H1-T]
gi|449121879|ref|ZP_21758225.1| tRNA modification GTPase mnmE [Treponema denticola MYR-T]
gi|448949320|gb|EMB30145.1| tRNA modification GTPase mnmE [Treponema denticola MYR-T]
gi|448950478|gb|EMB31300.1| tRNA modification GTPase mnmE [Treponema denticola H1-T]
Length = 472
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 AAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|449124238|ref|ZP_21760557.1| tRNA modification GTPase mnmE [Treponema denticola OTK]
gi|448942569|gb|EMB23463.1| tRNA modification GTPase mnmE [Treponema denticola OTK]
Length = 472
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 TAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|42527683|ref|NP_972781.1| tRNA modification GTPase TrmE [Treponema denticola ATCC 35405]
gi|449111317|ref|ZP_21747915.1| tRNA modification GTPase mnmE [Treponema denticola ATCC 33521]
gi|449113866|ref|ZP_21750349.1| tRNA modification GTPase mnmE [Treponema denticola ATCC 35404]
gi|81831356|sp|Q73KN7.1|MNME_TREDE RecName: Full=tRNA modification GTPase MnmE
gi|41818511|gb|AAS12700.1| tRNA modification GTPase TrmE [Treponema denticola ATCC 35405]
gi|448957949|gb|EMB38688.1| tRNA modification GTPase mnmE [Treponema denticola ATCC 35404]
gi|448958597|gb|EMB39326.1| tRNA modification GTPase mnmE [Treponema denticola ATCC 33521]
Length = 472
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 AAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|449116452|ref|ZP_21752900.1| tRNA modification GTPase mnmE [Treponema denticola H-22]
gi|448953345|gb|EMB34136.1| tRNA modification GTPase mnmE [Treponema denticola H-22]
Length = 472
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
+A+ + V L G TN GKS+LFNA L+ D + SD+ TT W +LN
Sbjct: 217 AAEKIFIQGAKVVLAGKTNAGKSSLFNALLKEDRAIV--SDI--HGTTRDWLEASLNF 270
>gi|94500521|ref|ZP_01307052.1| probable GTP-binding protein [Bermanella marisrubri]
gi|94427311|gb|EAT12290.1| probable GTP-binding protein [Bermanella marisrubri]
Length = 436
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
SS V LVG TN GKSTLFNA ++ K+ A+D + + L E++ +
Sbjct: 196 SSTPSVSLVGYTNAGKSTLFNALTEA---KVYAADQLFATLDPTLRRIPIQGLGEVVLVD 252
Query: 90 TVCKVKELGKKIL 102
TV ++ L K++
Sbjct: 253 TVGFIRHLPHKLV 265
>gi|320354718|ref|YP_004196057.1| tRNA modification GTPase trmE [Desulfobulbus propionicus DSM 2032]
gi|320123220|gb|ADW18766.1| tRNA modification GTPase trmE [Desulfobulbus propionicus DSM 2032]
Length = 463
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
V + G NVGKS+L N LQ + RA +P PGTT + ++E I I+ +
Sbjct: 227 VVITGQPNVGKSSLLNTLLQEE-----------RALVTPLPGTTRDTIEERIAIRGI 272
>gi|325280484|ref|YP_004253026.1| tRNA modification GTPase mnmE [Odoribacter splanchnicus DSM 20712]
gi|324312293|gb|ADY32846.1| tRNA modification GTPase mnmE [Odoribacter splanchnicus DSM 20712]
Length = 464
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
V+ + V +VG TNVGKSTL NA L+ D RA S GTT +++++ I
Sbjct: 217 VIKNGVPVAIVGNTNVGKSTLLNALLRED-----------RAIVSDIAGTTRDVIEDTIN 265
Query: 88 IQTV 91
+ +
Sbjct: 266 LNGI 269
>gi|421186412|ref|ZP_15643805.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB418]
gi|399967365|gb|EJO01847.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB418]
Length = 385
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
++++VG TNVGKSTL N ++ + S S TTS +PGTTL+
Sbjct: 185 EIFVVGVTNVGKSTLINQIIK------QISGRGSVITTSRFPGTTLD 225
>gi|224086974|ref|XP_002308022.1| predicted protein [Populus trichocarpa]
gi|222853998|gb|EEE91545.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V +VG NVGKS L N+ Q L + RAT P PG T ++
Sbjct: 138 VMVVGVPNVGKSALINSIHQIALSRFAVQGKKKRATVGPLPGVTQDI 184
>gi|403220448|dbj|BAM38581.1| GTPase [Theileria orientalis strain Shintoku]
Length = 585
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQ----SDLCKIKASDLISRATTSPWPGTTLNLLK 83
++Y+VG TNVGKST + FL + + + AT S PGTTL ++
Sbjct: 347 NIYVVGATNVGKSTFVDRFLDYIHYKHVGTLNLRRSVGGATRSAIPGTTLEFIE 400
>gi|254244435|ref|ZP_04937757.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|126197813|gb|EAZ61876.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
Length = 366
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+VG NVGKSTLFNA +S + C I+ + I P P LN L EI+K +
Sbjct: 7 IVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGI-----VPMPDARLNALAEIVKPE 61
Query: 90 TV 91
V
Sbjct: 62 RV 63
>gi|303247604|ref|ZP_07333875.1| tRNA modification GTPase TrmE [Desulfovibrio fructosovorans JJ]
gi|302491084|gb|EFL50978.1| tRNA modification GTPase TrmE [Desulfovibrio fructosovorans JJ]
Length = 465
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
V L G N GKS+LFNAFL +D RA + PGTT + L+E + + V
Sbjct: 228 VALFGKVNAGKSSLFNAFLGTD-----------RALVADQPGTTRDYLEEGLDLDGV 273
>gi|347757132|ref|YP_004864694.1| small GTP-binding domain-containing protein [Micavibrio
aeruginosavorus ARL-13]
gi|347589650|gb|AEP08692.1| small GTP-binding domain protein [Micavibrio aeruginosavorus
ARL-13]
Length = 475
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 15/73 (20%)
Query: 6 ALEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDL 65
ALEG + ++ EP + + + L A VG NVGKSTL NA LQ +
Sbjct: 187 ALEGNDDFDLSAIEPQVDTDTIPLRVA----FVGRPNVGKSTLLNALLQEE--------- 233
Query: 66 ISRATTSPWPGTT 78
R TSP GTT
Sbjct: 234 --RVMTSPEAGTT 244
>gi|451947367|ref|YP_007467962.1| tRNA modification GTPase trmE [Desulfocapsa sulfexigens DSM 10523]
gi|451906715|gb|AGF78309.1| tRNA modification GTPase trmE [Desulfocapsa sulfexigens DSM 10523]
Length = 461
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
V +VG NVGKS+L N LQ + RA + PGTT + ++E + IQ V
Sbjct: 225 VVIVGLPNVGKSSLLNTLLQEE-----------RALVTAIPGTTRDTIEEYLDIQGV 270
>gi|217966557|ref|YP_002352063.1| tRNA modification GTPase TrmE [Dictyoglomus turgidum DSM 6724]
gi|217335656|gb|ACK41449.1| tRNA modification GTPase TrmE [Dictyoglomus turgidum DSM 6724]
Length = 455
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 11/49 (22%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
V LVG NVGKS+LFNA ++ D RA +P PGTT + ++
Sbjct: 221 VILVGRPNVGKSSLFNALMKED-----------RAIVTPIPGTTRDYIE 258
>gi|304405894|ref|ZP_07387552.1| tRNA modification GTPase TrmE [Paenibacillus curdlanolyticus YK9]
gi|304345137|gb|EFM10973.1| tRNA modification GTPase TrmE [Paenibacillus curdlanolyticus YK9]
Length = 461
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 6 ALEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDL 65
ALEG + +L E I+ +V + +VG NVGKS+L NA QS+
Sbjct: 203 ALEGVKRLLKTASEGKILREGIVTA------IVGRPNVGKSSLLNALTQSN--------- 247
Query: 66 ISRATTSPWPGTTLNLLKEIIKIQTV 91
+A + PGTT ++++E + + +
Sbjct: 248 --KAIVTDIPGTTRDVIEEFVTVNGI 271
>gi|357473899|ref|XP_003607234.1| hypothetical protein MTR_4g074870 [Medicago truncatula]
gi|355508289|gb|AES89431.1| hypothetical protein MTR_4g074870 [Medicago truncatula]
Length = 575
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S G+V+ VG N GKSTL N+ + K IS T +P PGTTL +++
Sbjct: 299 SRGNVWTVGAQNAGKSTLINSIGKHVGGK------ISHLTEAPVPGTTLGIVR 345
>gi|325294918|ref|YP_004281432.1| tRNA modification GTPase mnmE [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065366|gb|ADY73373.1| tRNA modification GTPase mnmE [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 463
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
VL V +VG NVGKS+L NA L+ + RA + PGTT ++++E +
Sbjct: 220 VLKEGIKVAIVGRPNVGKSSLLNAILKEE-----------RAIVTEIPGTTRDIIEETVT 268
Query: 88 IQTV 91
++ +
Sbjct: 269 LKGI 272
>gi|444322836|ref|XP_004182059.1| hypothetical protein TBLA_0H02560 [Tetrapisispora blattae CBS 6284]
gi|387515105|emb|CCH62540.1| hypothetical protein TBLA_0H02560 [Tetrapisispora blattae CBS 6284]
Length = 544
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 19/76 (25%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCKV 94
+ L+G TNVGKS+L N ++ D+ A S PGTT +L+++II+
Sbjct: 280 ILLIGSTNVGKSSLINKLVKDDV-----------AIVSNIPGTTRDLIEKIIEFN----- 323
Query: 95 KELGKKILLSQVKGKN 110
G K++L+ G N
Sbjct: 324 ---GWKLILTDSAGIN 336
>gi|408907109|emb|CCM11592.2| GTPase and tRNA-U34 5-formylation enzyme TrmE [Helicobacter
heilmannii ASB1.4]
Length = 432
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 11/56 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVC 92
+VG NVGKS+L NA L L RA SP GTT + ++E++ + C
Sbjct: 199 IVGKPNVGKSSLLNALL-----------LQERAIVSPLAGTTRDTIEEVVYLNGSC 243
>gi|302845529|ref|XP_002954303.1| hypothetical protein VOLCADRAFT_118673 [Volvox carteri f.
nagariensis]
gi|300260508|gb|EFJ44727.1| hypothetical protein VOLCADRAFT_118673 [Volvox carteri f.
nagariensis]
Length = 722
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
GD+++VG N GKS+L A + ++ +D T +P PGTTL LL+
Sbjct: 488 GDLWVVGAQNAGKSSLIRA-----MKRLAGTDGKGDPTVAPVPGTTLGLLQ 533
>gi|49086120|gb|AAT51329.1| PA4673, partial [synthetic construct]
Length = 367
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+VG NVGKSTLFNA +S + C I+ + I P P LN L EI+K +
Sbjct: 7 IVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGI-----VPMPDARLNALAEIVKPE 61
Query: 90 TV 91
V
Sbjct: 62 HV 63
>gi|82705979|ref|XP_727192.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23482916|gb|EAA18757.1| GTPase of unknown function, putative [Plasmodium yoelii yoelii]
Length = 831
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQ----SDLCKIKASDLISRATTSPWPGTTLN-----LLKE 84
D+Y+VGC NVGKS+ N+FL+ + I T S P TTLN L K+
Sbjct: 515 DIYIVGCVNVGKSSFLNSFLKFINYKHIGDIYNKRKKGGVTVSNIPYTTLNYNVFKLKKD 574
Query: 85 IIKIQTV 91
I I T+
Sbjct: 575 INIIDTI 581
>gi|330794402|ref|XP_003285268.1| hypothetical protein DICPUDRAFT_149114 [Dictyostelium purpureum]
gi|325084810|gb|EGC38230.1| hypothetical protein DICPUDRAFT_149114 [Dictyostelium purpureum]
Length = 750
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 28/77 (36%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKA----------------------------SDL 65
DV+++GC+NVGKST N+ + K++ +
Sbjct: 354 DVFVLGCSNVGKSTFVNSLVDEYNSKVEFVKSDDQKEDKKKKLSIQEQKELEREKLLRSI 413
Query: 66 ISRATTSPWPGTTLNLL 82
S+ TTS PGTTLNLL
Sbjct: 414 QSKITTSILPGTTLNLL 430
>gi|294101372|ref|YP_003553230.1| tRNA modification GTPase TrmE [Aminobacterium colombiense DSM
12261]
gi|293616352|gb|ADE56506.1| tRNA modification GTPase TrmE [Aminobacterium colombiense DSM
12261]
Length = 455
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 11/52 (21%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
V LVG NVGKS+L NA L+ SRA + PGTT +L++E++
Sbjct: 222 VALVGRPNVGKSSLLNALLKE-----------SRAIVTAIPGTTRDLIEEVL 262
>gi|225873267|ref|YP_002754726.1| GTP-binding protein EngA [Acidobacterium capsulatum ATCC 51196]
gi|225793600|gb|ACO33690.1| ribosome-associated GTPase EngA [Acidobacterium capsulatum ATCC
51196]
Length = 472
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 18/78 (23%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII-------K 87
V ++G NVGKSTL NA S SRA SP GTT + + E+I +
Sbjct: 203 VAIIGRPNVGKSTLLNALTGS-----------SRAIVSPIAGTTRDAVDEVIEHNGQTLR 251
Query: 88 IQTVCKVKELGKKILLSQ 105
I ++ GK L+++
Sbjct: 252 IVDTAGIRRKGKTYLMAE 269
>gi|15805673|ref|NP_294369.1| GTP-binding protein Era [Deinococcus radiodurans R1]
gi|13959366|sp|Q9RWM0.1|ERA_DEIRA RecName: Full=GTPase Era
gi|6458347|gb|AAF10224.1|AE001922_4 GTP-binding protein Era [Deinococcus radiodurans R1]
Length = 311
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
Query: 30 SSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+ AG V +VG NVGKSTL NAFL + + A TSP P TT ++ I +
Sbjct: 15 THAGFVAIVGKPNVGKSTLLNAFLGTKV-----------APTSPRPQTTRRGVRGIYTLD 63
Query: 90 T 90
Sbjct: 64 N 64
>gi|373494057|ref|ZP_09584663.1| tRNA modification GTPase TrmE [Eubacterium infirmum F0142]
gi|371969191|gb|EHO86642.1| tRNA modification GTPase TrmE [Eubacterium infirmum F0142]
Length = 469
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
+L +V ++G NVGKS+L NA L+ SRA + PGTT + ++E+I
Sbjct: 216 ILREGLNVAIIGRPNVGKSSLMNAMLRE-----------SRAIVTEIPGTTRDTIEELIN 264
Query: 88 IQTV 91
++ +
Sbjct: 265 VRGI 268
>gi|345871389|ref|ZP_08823335.1| tRNA modification GTPase mnmE [Thiorhodococcus drewsii AZ1]
gi|343920552|gb|EGV31283.1| tRNA modification GTPase mnmE [Thiorhodococcus drewsii AZ1]
Length = 446
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
VL V + G NVGKS+L NA +D A +P PGTT +LL++ I+
Sbjct: 211 VLREGLVVVIAGAPNVGKSSLLNALSDTD-----------AAIVTPIPGTTRDLLRQDIQ 259
Query: 88 I 88
I
Sbjct: 260 I 260
>gi|342214518|ref|ZP_08707206.1| ferrous iron transport protein B [Veillonella sp. oral taxon 780
str. F0422]
gi|341592093|gb|EGS34982.1| ferrous iron transport protein B [Veillonella sp. oral taxon 780
str. F0422]
Length = 263
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
V ++G N GKS+L NA L+ D RA + PGTT + ++E + IQ +
Sbjct: 28 VSIIGRPNAGKSSLMNALLRED-----------RAIVTNIPGTTRDSIEEFLTIQGI 73
>gi|313107335|ref|ZP_07793530.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|386063871|ref|YP_005979175.1| translation-associated GTPase [Pseudomonas aeruginosa NCGM2.S1]
gi|310880032|gb|EFQ38626.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|348032430|dbj|BAK87790.1| translation-associated GTPase [Pseudomonas aeruginosa NCGM2.S1]
Length = 366
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+VG NVGKSTLFNA +S + C I+ + I P P LN L EI+K +
Sbjct: 7 IVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGI-----VPMPDARLNALAEIVKPE 61
Query: 90 TV 91
V
Sbjct: 62 RV 63
>gi|296391494|ref|ZP_06880969.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa PAb1]
gi|416874254|ref|ZP_11918023.1| GTP-binding protein YchF [Pseudomonas aeruginosa 152504]
gi|334843658|gb|EGM22244.1| GTP-binding protein YchF [Pseudomonas aeruginosa 152504]
Length = 366
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+VG NVGKSTLFNA +S + C I+ + I P P LN L EI+K +
Sbjct: 7 IVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGI-----VPMPDARLNALAEIVKPE 61
Query: 90 TV 91
V
Sbjct: 62 RV 63
>gi|219118313|ref|XP_002179934.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408987|gb|EEC48920.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 400
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 17/94 (18%)
Query: 5 PALEGREVILVARPEP-NIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKAS 63
P + + +I A+PEP I +L L D+ LVG N GKS+L +A
Sbjct: 227 PTPDAKILIRKAKPEPGEIAFLELELKLIADIGLVGFPNAGKSSLLHA------------ 274
Query: 64 DLISRAT--TSPWPGTTLNLLKEIIKIQTVCKVK 95
+SRA+ +P+P TTL+ L I+ Q +++
Sbjct: 275 --MSRASPEIAPYPFTTLHPLIGCIEYQDGYRIR 306
>gi|15599868|ref|NP_253362.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa PAO1]
gi|107099660|ref|ZP_01363578.1| hypothetical protein PaerPA_01000678 [Pseudomonas aeruginosa
PACS2]
gi|116052818|ref|YP_793135.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218893770|ref|YP_002442639.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa LESB58]
gi|254238587|ref|ZP_04931910.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|355652199|ref|ZP_09056634.1| GTP-dependent nucleic acid-binding protein engD [Pseudomonas sp.
2_1_26]
gi|386060830|ref|YP_005977352.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa M18]
gi|392986342|ref|YP_006484929.1| GTP-binding protein YchF [Pseudomonas aeruginosa DK2]
gi|416855499|ref|ZP_11911530.1| GTP-binding protein YchF [Pseudomonas aeruginosa 138244]
gi|418588023|ref|ZP_13152040.1| GTP-binding protein YchF [Pseudomonas aeruginosa MPAO1/P1]
gi|418590134|ref|ZP_13154049.1| GTP-binding protein YchF [Pseudomonas aeruginosa MPAO1/P2]
gi|419754579|ref|ZP_14280939.1| GTP-binding protein YchF [Pseudomonas aeruginosa PADK2_CF510]
gi|420141861|ref|ZP_14649500.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa CIG1]
gi|421156099|ref|ZP_15615553.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 14886]
gi|421163232|ref|ZP_15621959.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 25324]
gi|421170458|ref|ZP_15628410.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 700888]
gi|421176926|ref|ZP_15634584.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa CI27]
gi|421182735|ref|ZP_15640207.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa E2]
gi|421519231|ref|ZP_15965903.1| GTP-binding protein YchF [Pseudomonas aeruginosa PAO579]
gi|424944550|ref|ZP_18360313.1| putative GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|451985061|ref|ZP_21933292.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas
aeruginosa 18A]
gi|9950929|gb|AAG08060.1|AE004881_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115588039|gb|ABJ14054.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170518|gb|EAZ56029.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|218773998|emb|CAW29813.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58]
gi|334842856|gb|EGM21455.1| GTP-binding protein YchF [Pseudomonas aeruginosa 138244]
gi|346060996|dbj|GAA20879.1| putative GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|347307136|gb|AEO77250.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa M18]
gi|354824407|gb|EHF08658.1| GTP-dependent nucleic acid-binding protein engD [Pseudomonas sp.
2_1_26]
gi|375041163|gb|EHS33876.1| GTP-binding protein YchF [Pseudomonas aeruginosa MPAO1/P1]
gi|375051085|gb|EHS43558.1| GTP-binding protein YchF [Pseudomonas aeruginosa MPAO1/P2]
gi|384398992|gb|EIE45395.1| GTP-binding protein YchF [Pseudomonas aeruginosa PADK2_CF510]
gi|392321847|gb|AFM67227.1| GTP-binding protein YchF [Pseudomonas aeruginosa DK2]
gi|403245418|gb|EJY59235.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa CIG1]
gi|404346216|gb|EJZ72567.1| GTP-binding protein YchF [Pseudomonas aeruginosa PAO579]
gi|404519478|gb|EKA30230.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 14886]
gi|404523396|gb|EKA33820.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 700888]
gi|404529480|gb|EKA39516.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 25324]
gi|404530296|gb|EKA40303.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa CI27]
gi|404541481|gb|EKA50838.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa E2]
gi|451757235|emb|CCQ85815.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas
aeruginosa 18A]
gi|453042723|gb|EME90462.1| GTP-binding protein YchF [Pseudomonas aeruginosa PA21_ST175]
Length = 366
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+VG NVGKSTLFNA +S + C I+ + I P P LN L EI+K +
Sbjct: 7 IVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGI-----VPMPDARLNALAEIVKPE 61
Query: 90 TV 91
V
Sbjct: 62 RV 63
>gi|346224564|ref|ZP_08845706.1| tRNA modification GTPase TrmE [Anaerophaga thermohalophila DSM
12881]
Length = 470
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 25/87 (28%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI------ 88
V +VG TN GKSTL NA LQ + RA S GTT +++++++ I
Sbjct: 225 VAIVGHTNAGKSTLLNALLQEE-----------RAIVSDVHGTTRDVIEDVMNIEGITFR 273
Query: 89 --------QTVCKVKELGKKILLSQVK 107
+T+ KV+ +G + +++K
Sbjct: 274 FIDTAGIRETIDKVESMGIALTYNKIK 300
>gi|94266686|ref|ZP_01290361.1| tRNA modification GTPase TrmE:Small GTP-binding protein
domain:GTP-binding [delta proteobacterium MLMS-1]
gi|93452674|gb|EAT03231.1| tRNA modification GTPase TrmE:Small GTP-binding protein
domain:GTP-binding [delta proteobacterium MLMS-1]
Length = 500
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 11/57 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
V ++G NVGKS+L NA L+ + RA +P PGTT + ++E I++ V
Sbjct: 235 VAILGRPNVGKSSLLNALLREE-----------RAIVTPVPGTTRDTIEESIEVNGV 280
>gi|414871399|tpg|DAA49956.1| TPA: hypothetical protein ZEAMMB73_838371 [Zea mays]
Length = 237
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
LVG NVGKS L N+ + + A D RAT P PG T ++
Sbjct: 2 LVGVPNVGKSALINSIHRIATSRFPAKDKNKRATVGPLPGVTQDI 46
>gi|152987964|ref|YP_001350654.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa PA7]
gi|452877563|ref|ZP_21954839.1| GTP-binding protein YchF [Pseudomonas aeruginosa VRFPA01]
gi|150963122|gb|ABR85147.1| GTP-binding protein YchF [Pseudomonas aeruginosa PA7]
gi|452185692|gb|EME12710.1| GTP-binding protein YchF [Pseudomonas aeruginosa VRFPA01]
Length = 366
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+VG NVGKSTLFNA +S + C I+ + I P P LN L EI+K +
Sbjct: 7 IVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGI-----VPMPDARLNALAEIVKPE 61
Query: 90 TV 91
V
Sbjct: 62 RV 63
>gi|320102561|ref|YP_004178152.1| GTP-binding protein TrmE [Isosphaera pallida ATCC 43644]
gi|319749843|gb|ADV61603.1| GTP-binding protein TrmE [Isosphaera pallida ATCC 43644]
Length = 526
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
V +VG N GKS LFNA L SD RA SP GTT + L E +++
Sbjct: 268 VVIVGAPNAGKSCLFNALLGSD-----------RALVSPVVGTTRDYLAEPLQL 310
>gi|262038122|ref|ZP_06011523.1| tRNA modification GTPase TrmE [Leptotrichia goodfellowii F0264]
gi|261747846|gb|EEY35284.1| tRNA modification GTPase TrmE [Leptotrichia goodfellowii F0264]
Length = 455
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 11/55 (20%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+VG NVGKSTL N+ L+ + RA + PGTT ++++EII I+ +
Sbjct: 223 IVGKPNVGKSTLLNSLLKEE-----------RAIVTHIPGTTRDIIEEIINIKGI 266
>gi|373456070|ref|ZP_09547875.1| tRNA modification GTPase TrmE [Dialister succinatiphilus YIT 11850]
gi|371934225|gb|EHO62029.1| tRNA modification GTPase TrmE [Dialister succinatiphilus YIT 11850]
Length = 459
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 11/55 (20%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+VG N GKS+L NA LQ D RA + PGTT + ++E IKI V
Sbjct: 226 IVGRPNAGKSSLLNALLQED-----------RAIVTDIPGTTRDTIEESIKIGGV 269
>gi|157364263|ref|YP_001471030.1| tRNA modification GTPase TrmE [Thermotoga lettingae TMO]
gi|205829181|sp|A8F732.1|MNME_THELT RecName: Full=tRNA modification GTPase MnmE
gi|157314867|gb|ABV33966.1| tRNA modification GTPase TrmE [Thermotoga lettingae TMO]
Length = 450
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Query: 27 LVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L+LSS V ++G NVGKSTL N ++ + RA + PGTT +L++
Sbjct: 208 LILSSGIKVVIIGKPNVGKSTLLNTLVKEE-----------RAIVTDIPGTTRDLIE 253
>gi|39998554|ref|NP_954505.1| tRNA modification GTPase TrmE [Geobacter sulfurreducens PCA]
gi|409913904|ref|YP_006892369.1| tRNA (5-carboxymethylaminomethyl-U34) modification GTPase
[Geobacter sulfurreducens KN400]
gi|81700815|sp|Q746Q3.1|MNME_GEOSL RecName: Full=tRNA modification GTPase MnmE
gi|39985501|gb|AAR36855.1| tRNA (5-carboxymethylaminomethyl-U34) modification GTPase
[Geobacter sulfurreducens PCA]
gi|298507496|gb|ADI86219.1| tRNA (5-carboxymethylaminomethyl-U34) modification GTPase
[Geobacter sulfurreducens KN400]
Length = 456
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
VL V + G NVGKS+L N LQ RA + PGTT ++++E++
Sbjct: 216 VLREGVAVLIAGKPNVGKSSLLNTLLQE-----------KRAIVTSVPGTTRDIIEEVVN 264
Query: 88 IQ 89
I+
Sbjct: 265 IR 266
>gi|206900693|ref|YP_002251652.1| tRNA modification GTPase TrmE [Dictyoglomus thermophilum H-6-12]
gi|206739796|gb|ACI18854.1| tRNA modification GTPase TrmE [Dictyoglomus thermophilum H-6-12]
Length = 455
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 11/49 (22%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
V LVG NVGKS+LFNA ++ D RA +P PGTT + ++
Sbjct: 221 VILVGRPNVGKSSLFNALMRED-----------RAIVTPIPGTTRDYIE 258
>gi|170288479|ref|YP_001738717.1| tRNA modification GTPase TrmE [Thermotoga sp. RQ2]
gi|205829186|sp|B1L9N6.1|MNME_THESQ RecName: Full=tRNA modification GTPase MnmE
gi|170175982|gb|ACB09034.1| tRNA modification GTPase TrmE [Thermotoga sp. RQ2]
Length = 450
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
A ++L+ + +VG NVGKSTL N L D RA + PGTT +++
Sbjct: 203 DAGILLNRGLRMVIVGKPNVGKSTLLNRLLNED-----------RAIVTDIPGTTRDVIS 251
Query: 84 EIIKIQTV 91
E I I+ +
Sbjct: 252 EEIVIRGI 259
>gi|404498400|ref|YP_006722506.1| tRNA modification GTPase TrmE [Geobacter metallireducens GS-15]
gi|418067087|ref|ZP_12704439.1| tRNA modification GTPase TrmE [Geobacter metallireducens RCH3]
gi|123570636|sp|Q39PQ9.1|MNME_GEOMG RecName: Full=tRNA modification GTPase MnmE
gi|78195998|gb|ABB33765.1| tRNA (5-carboxymethylaminomethyl-U34) modification GTPase
[Geobacter metallireducens GS-15]
gi|373559448|gb|EHP85745.1| tRNA modification GTPase TrmE [Geobacter metallireducens RCH3]
Length = 457
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
VL V + G NVGKS+L N LQ RA + PGTT ++++E++
Sbjct: 217 VLRDGVSVLIAGKPNVGKSSLLNTLLQE-----------KRAIVTSVPGTTRDIIEEVVN 265
Query: 88 IQ 89
++
Sbjct: 266 VR 267
>gi|125605432|gb|EAZ44468.1| hypothetical protein OsJ_29085 [Oryza sativa Japonica Group]
Length = 596
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S G+V+ VG NVGKSTL NA + + + T +P PGTTL++++
Sbjct: 315 SRGNVWAVGARNVGKSTLLNA-----IARCSGIEGGPTLTEAPVPGTTLDVIQ 362
>gi|61679425|pdb|1XZP|A Chain A, Structure Of The Gtp-Binding Protein Trme From Thermotoga
Maritima
gi|61679427|pdb|1XZQ|A Chain A, Structure Of The Gtp-binding Protein Trme From Thermotoga
Maritima Complexed With 5-formyl-thf
Length = 482
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
A ++L+ + +VG NVGKSTL N L D RA + PGTT +++
Sbjct: 235 DAGILLNRGLRMVIVGKPNVGKSTLLNRLLNED-----------RAIVTDIPGTTRDVIS 283
Query: 84 EIIKIQTV 91
E I I+ +
Sbjct: 284 EEIVIRGI 291
>gi|428222486|ref|YP_007106656.1| GTP-binding protein Era [Synechococcus sp. PCC 7502]
gi|427995826|gb|AFY74521.1| GTP-binding protein Era [Synechococcus sp. PCC 7502]
Length = 302
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
+G V LVG NVGKSTL NA + + A TSP P TT N L+ I+ +
Sbjct: 12 SGFVALVGRPNVGKSTLLNALVGQKI-----------AITSPTPQTTRNRLQGILTL 57
>gi|289704769|ref|ZP_06501190.1| putative ATP/GTP-binding protein [Micrococcus luteus SK58]
gi|289558485|gb|EFD51755.1| putative ATP/GTP-binding protein [Micrococcus luteus SK58]
Length = 586
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 14/65 (21%)
Query: 18 PEPNIVSADLVLSSAGD----------VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLIS 67
PE + AD V+ +AG+ V G T GKS+LFNA DL ++ A +
Sbjct: 28 PEDVVAGADAVVRAAGERQALSAEHTVVGFFGATGSGKSSLFNALTGRDLARVAA----T 83
Query: 68 RATTS 72
R TTS
Sbjct: 84 RPTTS 88
>gi|281414127|ref|ZP_06245869.1| hypothetical protein MlutN2_02811 [Micrococcus luteus NCTC 2665]
Length = 566
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 14/65 (21%)
Query: 18 PEPNIVSADLVLSSAGD----------VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLIS 67
PE + AD V+ +AG+ V G T GKS+LFNA DL ++ A +
Sbjct: 28 PEDVVAGADAVVRAAGERQALSAEHTVVGFFGATGSGKSSLFNALTGRDLARVAA----T 83
Query: 68 RATTS 72
R TTS
Sbjct: 84 RPTTS 88
>gi|239917389|ref|YP_002956947.1| hypothetical protein Mlut_08700 [Micrococcus luteus NCTC 2665]
gi|239838596|gb|ACS30393.1| hypothetical protein Mlut_08700 [Micrococcus luteus NCTC 2665]
Length = 586
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 14/65 (21%)
Query: 18 PEPNIVSADLVLSSAGD----------VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLIS 67
PE + AD V+ +AG+ V G T GKS+LFNA DL ++ A +
Sbjct: 28 PEDVVAGADAVVRAAGERQALSAEHTVVGFFGATGSGKSSLFNALTGRDLARVAA----T 83
Query: 68 RATTS 72
R TTS
Sbjct: 84 RPTTS 88
>gi|50725922|dbj|BAD33450.1| GTP-binding protein-like [Oryza sativa Japonica Group]
gi|50726207|dbj|BAD33726.1| GTP-binding protein-like [Oryza sativa Japonica Group]
gi|215769235|dbj|BAH01464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202025|gb|EEC84452.1| hypothetical protein OsI_31074 [Oryza sativa Indica Group]
Length = 604
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S G+V+ VG NVGKSTL NA + + + T +P PGTTL++++
Sbjct: 323 SRGNVWAVGARNVGKSTLLNA-----IARCSGIEGGPTLTEAPVPGTTLDVIQ 370
>gi|386859740|ref|YP_006272446.1| GTPase Der [Borrelia crocidurae str. Achema]
gi|384934621|gb|AFI31294.1| GTPase Der [Borrelia crocidurae str. Achema]
Length = 438
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 11/56 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQT 90
V +VG NVGKSTLFN L S+ R+ T+ G T +L++EI KI +
Sbjct: 12 VLIVGRPNVGKSTLFNKLLSSN-----------RSITNEVYGVTRDLVREICKINS 56
>gi|284049397|ref|YP_003399736.1| tRNA modification GTPase TrmE [Acidaminococcus fermentans DSM
20731]
gi|283953618|gb|ADB48421.1| tRNA modification GTPase TrmE [Acidaminococcus fermentans DSM
20731]
Length = 457
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 24 SADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+A +L +VG NVGKS+L N+ LQ+D RA S PGTT ++++
Sbjct: 211 TAGRILREGLRTAIVGRPNVGKSSLLNSLLQAD-----------RAIVSNIPGTTRDIIE 259
Query: 84 EIIKI 88
E + I
Sbjct: 260 EQMTI 264
>gi|329565815|gb|AEB92244.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
Length = 404
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCK 59
LE +E++ A+ + +V S +G V ++G NVGKS+L NA L+
Sbjct: 155 LERKEMLETAKEIVEDIDKLIVSSESGRVIREGLKTAIIGKPNVGKSSLLNALLKE---- 210
Query: 60 IKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+RA + PGTT ++++E + ++ +
Sbjct: 211 -------NRAIVTDIPGTTRDIIEEYVNVKGI 235
>gi|326495204|dbj|BAJ85698.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
+V+++G N GKSTL N F + K I+R T + PGTTL +L+
Sbjct: 405 NVWVIGAQNAGKSTLINGFAK------KQGVNITRLTEAAVPGTTLGILR 448
>gi|374849505|dbj|BAL52519.1| tRNA modification GTPase TrmE [uncultured Bacteroidetes bacterium]
Length = 455
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
V +VG N GKS+LFNA L RA SP PGTT + ++E + +
Sbjct: 225 VGIVGFPNAGKSSLFNALLGR-----------QRAIVSPQPGTTRDYIEETLPV 267
>gi|329565799|gb|AEB92236.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
gi|329565803|gb|AEB92238.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
gi|329565805|gb|AEB92239.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
Length = 404
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCK 59
LE +E++ A+ + +V S +G V ++G NVGKS+L NA L+
Sbjct: 155 LERKEMLETAKEIVEDIDKLIVSSESGRVIREGLKTAIIGKPNVGKSSLLNALLKE---- 210
Query: 60 IKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+RA + PGTT ++++E + ++ +
Sbjct: 211 -------NRAIVTDIPGTTRDIIEEYVNVKGI 235
>gi|329565797|gb|AEB92235.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
Length = 404
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCK 59
LE +E++ A+ + +V S +G V ++G NVGKS+L NA L+
Sbjct: 155 LERKEMLKTAKEIVEDIDKLIVSSESGRVIREGLKTAIIGKPNVGKSSLLNALLKE---- 210
Query: 60 IKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+RA + PGTT ++++E + ++ +
Sbjct: 211 -------NRAIVTDIPGTTRDIIEEYVNVKGI 235
>gi|414154097|ref|ZP_11410417.1| tRNA modification GTPase MnmE [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411454282|emb|CCO08321.1| tRNA modification GTPase MnmE [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 461
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 30 SSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
++ G VY +VG NVGKS+L NA L+ RA + PGTT +++
Sbjct: 213 AATGKVYREGLRTVIVGKPNVGKSSLLNALLRE-----------QRAIVTDIPGTTRDVI 261
Query: 83 KEIIKIQTV 91
+E+I I+ V
Sbjct: 262 EEVINIKGV 270
>gi|403737913|ref|ZP_10950641.1| ferrous iron transport protein B [Austwickia chelonae NBRC
105200]
gi|403192025|dbj|GAB77411.1| ferrous iron transport protein B [Austwickia chelonae NBRC
105200]
Length = 661
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 12/47 (25%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNL 81
V LVG NVGKSTLFNA +R T WPGTT+ +
Sbjct: 42 VALVGSPNVGKSTLFNALTG------------ARRTVGNWPGTTVEV 76
>gi|383787213|ref|YP_005471782.1| ribosome biogenesis GTPase YqeH [Fervidobacterium pennivorans DSM
9078]
gi|383110060|gb|AFG35663.1| ribosome biogenesis GTPase YqeH [Fervidobacterium pennivorans DSM
9078]
Length = 370
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 12/52 (23%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKE 84
G ++G TNVGKS+L A S AT SP+PGTT+ L++
Sbjct: 157 GSALVLGVTNVGKSSLLKAITNSS------------ATISPYPGTTIGLIEH 196
>gi|203284418|ref|YP_002222158.1| GTP-binding protein [Borrelia duttonii Ly]
gi|203287952|ref|YP_002222967.1| GTP-binding protein [Borrelia recurrentis A1]
gi|201083861|gb|ACH93452.1| GTP-binding protein [Borrelia duttonii Ly]
gi|201085172|gb|ACH94746.1| GTP-binding protein [Borrelia recurrentis A1]
Length = 440
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 11/56 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQT 90
V +VG NVGKSTLFN L S+ R+ T+ G T +L++EI KI +
Sbjct: 14 VLIVGRPNVGKSTLFNKLLSSN-----------RSITNEVYGVTRDLVREICKINS 58
>gi|443473464|ref|ZP_21063488.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas
pseudoalcaligenes KF707]
gi|442904201|gb|ELS29317.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas
pseudoalcaligenes KF707]
Length = 366
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+VG NVGKSTLFNA +S + C I+ + I P P LN L EI+K +
Sbjct: 7 IVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGI-----VPMPDPRLNALAEIVKPE 61
Query: 90 TV 91
V
Sbjct: 62 RV 63
>gi|242034429|ref|XP_002464609.1| hypothetical protein SORBIDRAFT_01g021800 [Sorghum bicolor]
gi|241918463|gb|EER91607.1| hypothetical protein SORBIDRAFT_01g021800 [Sorghum bicolor]
Length = 369
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+ LVG NVGKS L N+ + + D RAT P PG T ++ I Q
Sbjct: 136 IMLVGVPNVGKSALINSIHRIATSRFPVKDKKKRATVGPLPGVTQDIAGYKIATQ 190
>gi|297609351|ref|NP_001063000.2| Os09g0364500 [Oryza sativa Japonica Group]
gi|255678838|dbj|BAF24914.2| Os09g0364500 [Oryza sativa Japonica Group]
Length = 434
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 31 SAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
S G+V+ VG NVGKSTL NA + + + T +P PGTTL++++
Sbjct: 323 SRGNVWAVGARNVGKSTLLNA-----IARCSGIEGGPTLTEAPVPGTTLDVIQ 370
>gi|329565807|gb|AEB92240.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
gi|329565811|gb|AEB92242.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
Length = 404
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCK 59
LE +E++ A+ + +V S +G V ++G NVGKS+L NA L+
Sbjct: 155 LERKEMLETAKEIVKDIDKLIVSSESGRVIREGLKTAIIGKPNVGKSSLLNALLKE---- 210
Query: 60 IKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+RA + PGTT ++++E + ++ +
Sbjct: 211 -------NRAIVTDIPGTTRDIIEEYVNVKGI 235
>gi|339485703|ref|YP_004700231.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
putida S16]
gi|431800776|ref|YP_007227679.1| GTP-binding protein YchF [Pseudomonas putida HB3267]
gi|338836546|gb|AEJ11351.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
putida S16]
gi|430791541|gb|AGA71736.1| GTP-binding protein YchF [Pseudomonas putida HB3267]
Length = 366
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 12/58 (20%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIK 87
+VG NVGKSTLFNA +S + C I+ + I P P LN L EI+K
Sbjct: 7 IVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGI-----VPMPDARLNALAEIVK 59
>gi|329565793|gb|AEB92233.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
gi|329565813|gb|AEB92243.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
Length = 404
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCK 59
LE +E++ A+ + +V S +G V ++G NVGKS+L NA L+
Sbjct: 155 LERKEMLETAKEIVKDIDKLIVSSESGRVIREGLKTAIIGKPNVGKSSLLNALLKE---- 210
Query: 60 IKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+RA + PGTT ++++E + ++ +
Sbjct: 211 -------NRAIVTDIPGTTRDIIEEYVNVKGI 235
>gi|329565809|gb|AEB92241.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
Length = 404
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCK 59
LE +E++ A+ + +V S +G V ++G NVGKS+L NA L+
Sbjct: 155 LERKEMLKTAKEIVKDIDKLIVSSESGRVIREGLKTAIIGKPNVGKSSLLNALLKE---- 210
Query: 60 IKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+RA + PGTT ++++E + ++ +
Sbjct: 211 -------NRAIVTDIPGTTRDIIEEYVNVKGI 235
>gi|329565795|gb|AEB92234.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
Length = 404
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCK 59
LE +E++ A+ + +V S +G V ++G NVGKS+L NA L+
Sbjct: 155 LERKEMLETAKEIVKDIDKLIVSSESGRVIREGLKTAIIGKPNVGKSSLLNALLKE---- 210
Query: 60 IKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+RA + PGTT ++++E + ++ +
Sbjct: 211 -------NRAIVTDIPGTTRDIIEEYVNVKGI 235
>gi|329565801|gb|AEB92237.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus]
Length = 404
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 7 LEGREVILVARPEPNIVSADLVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCK 59
LE +E++ A+ + +V S +G V ++G NVGKS+L NA L+
Sbjct: 155 LERKEMLETAKEIVKDIDKLIVSSESGRVIREGLKTAIIGKPNVGKSSLLNALLKE---- 210
Query: 60 IKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
+RA + PGTT ++++E + ++ +
Sbjct: 211 -------NRAIVTDIPGTTRDIIEEYVNVKGI 235
>gi|372270584|ref|ZP_09506632.1| GTP-binding protein YchF [Marinobacterium stanieri S30]
Length = 363
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIKIQ 89
+VG NVGKSTLFNA ++ + C I+ + A P P LN L EI+K +
Sbjct: 7 IVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPN-----AGIVPMPDPRLNALSEIVKPE 61
Query: 90 TV 91
V
Sbjct: 62 KV 63
>gi|23011756|ref|ZP_00052024.1| COG2262: GTPases [Magnetospirillum magnetotacticum MS-1]
Length = 376
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLI-------SRATTSPWPGTTL 79
V LVG TN GKSTLFNA +++ +KA D++ +RAT P T +
Sbjct: 136 VALVGYTNAGKSTLFNALTKAE---VKAQDMLFATLDPTARATKLPHGETVI 184
>gi|375089692|ref|ZP_09736017.1| ribosome biogenesis GTPase YqeH [Facklamia languida CCUG 37842]
gi|374566539|gb|EHR37778.1| ribosome biogenesis GTPase YqeH [Facklamia languida CCUG 37842]
Length = 380
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 34 DVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLN 80
+VYLVG TNVGKSTL N ++ TTS PGTTL+
Sbjct: 177 NVYLVGVTNVGKSTLMNQLIR------HFGGEQGVITTSNHPGTTLD 217
>gi|104780082|ref|YP_606580.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
entomophila L48]
gi|95109069|emb|CAK13765.1| putative GTP-binding protein [Pseudomonas entomophila L48]
Length = 366
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 12/58 (20%)
Query: 37 LVGCTNVGKSTLFNAFLQSDL-------CKIKASDLISRATTSPWPGTTLNLLKEIIK 87
+VG NVGKSTLFNA +S + C I+ + I P P LN L EI+K
Sbjct: 7 IVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGI-----VPMPDARLNALAEIVK 59
>gi|148266438|ref|YP_001233144.1| tRNA modification GTPase TrmE [Geobacter uraniireducens Rf4]
gi|205829152|sp|A5G9V3.1|MNME_GEOUR RecName: Full=tRNA modification GTPase MnmE
gi|146399938|gb|ABQ28571.1| tRNA modification GTPase trmE [Geobacter uraniireducens Rf4]
Length = 455
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
VL V + G NVGKS+L N L+ RA + PGTT +L++E++
Sbjct: 216 VLRDGVSVVIAGKPNVGKSSLLNTLLRE-----------KRAIVTSVPGTTRDLIEEVVT 264
Query: 88 IQ 89
I+
Sbjct: 265 IK 266
>gi|427798963|gb|JAA64933.1| Putative mitochondrial gtpase, partial [Rhipicephalus pulchellus]
Length = 431
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 11/54 (20%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
V +VG TNVGKS+LFNA Q D A SP GTT ++++ + I
Sbjct: 247 VAIVGRTNVGKSSLFNALCQRD-----------AAIVSPIAGTTRDVVESTLDI 289
>gi|15643611|ref|NP_228657.1| hypothetical protein TM0848 [Thermotoga maritima MSB8]
gi|403252589|ref|ZP_10918898.1| hypothetical protein EMP_02399 [Thermotoga sp. EMP]
gi|418044982|ref|ZP_12683078.1| ribosome biogenesis GTPase YqeH [Thermotoga maritima MSB8]
gi|4981381|gb|AAD35930.1|AE001751_10 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678064|gb|EHA61211.1| ribosome biogenesis GTPase YqeH [Thermotoga maritima MSB8]
gi|402812079|gb|EJX26559.1| hypothetical protein EMP_02399 [Thermotoga sp. EMP]
Length = 363
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 12/51 (23%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
+VG TNVGKS+L N +C T SP+PGTTL +LK +K
Sbjct: 161 VVGVTNVGKSSLLNK-----IC-------THENTISPFPGTTLGILKRKVK 199
>gi|356538577|ref|XP_003537779.1| PREDICTED: uncharacterized protein yqeH-like [Glycine max]
Length = 592
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
G+V+ VG N GKSTL N+ + A I+ T +P PGTTL +++
Sbjct: 316 GNVWAVGAQNAGKSTLINSIGKY------AGGKITHLTEAPVPGTTLGIVR 360
>gi|383318449|ref|YP_005379291.1| tRNA modification GTPase TrmE [Frateuria aurantia DSM 6220]
gi|379045553|gb|AFC87609.1| tRNA modification GTPase TrmE [Frateuria aurantia DSM 6220]
Length = 446
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 11/60 (18%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
LS +G V L+G N GKS+L NA SD RA + GTT ++L+E I +
Sbjct: 212 LSDSGRVALIGRPNQGKSSLLNALAGSD-----------RAIVTATAGTTRDVLRESISL 260
>gi|328952573|ref|YP_004369907.1| tRNA modification GTPase mnmE [Desulfobacca acetoxidans DSM 11109]
gi|328452897|gb|AEB08726.1| tRNA modification GTPase mnmE [Desulfobacca acetoxidans DSM 11109]
Length = 456
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQ--TVC 92
V L G NVGKS+L N LQ+D RA + PGTT +++ E + IQ VC
Sbjct: 223 VVLAGRPNVGKSSLLNRLLQTD-----------RAIVTDIPGTTRDVIAENLVIQGLPVC 271
Query: 93 KVKELGKKILLSQVKGKNMSKTEK 116
+ G + + V+ + +T++
Sbjct: 272 LLDTAGLRPAQNLVEEIGIQRTQE 295
>gi|295111068|emb|CBL27818.1| tRNA modification GTPase TrmE [Synergistetes bacterium SGP1]
Length = 456
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 3 LWPALEGREVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKA 62
L+ ALE + L R + S L+L V + G NVGKS+L NA L+
Sbjct: 193 LYDALETLRITL--RDLEDRCSLGLLLREGIRVVISGRPNVGKSSLLNALLKQ------- 243
Query: 63 SDLISRATTSPWPGTTLNLLKEII 86
SRA + PGTT ++++E +
Sbjct: 244 ----SRAIVTAVPGTTRDIIEETV 263
>gi|397168078|ref|ZP_10491516.1| GTPase of unknown function family protein [Enterobacter
radicincitans DSM 16656]
gi|396089613|gb|EJI87185.1| GTPase of unknown function family protein [Enterobacter
radicincitans DSM 16656]
Length = 295
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISR 68
++G T VGKS+L NA +SD+C + A D +R
Sbjct: 41 IMGKTGVGKSSLCNALFRSDICAVNAVDACTR 72
>gi|397690000|ref|YP_006527254.1| tRNA modification gtpase trme [Melioribacter roseus P3M]
gi|395811492|gb|AFN74241.1| tRNA modification gtpase trme [Melioribacter roseus P3M]
Length = 455
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 28 VLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
V+ +V LVG NVGKS+L N L+ +RA S PGTT ++++E +
Sbjct: 221 VIRDGVNVALVGKPNVGKSSLLNYLLKE-----------ARAIVSEIPGTTRDIIREEVT 269
Query: 88 IQTV 91
I+ +
Sbjct: 270 IEGI 273
>gi|219685816|ref|ZP_03540625.1| tRNA modification GTPase TrmE [Borrelia garinii Far04]
gi|219672649|gb|EED29679.1| tRNA modification GTPase TrmE [Borrelia garinii Far04]
Length = 464
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 11/47 (23%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
L G NVGKS+LFN FL+ D R+ S +PGTT + ++
Sbjct: 227 LAGSVNVGKSSLFNMFLKKD-----------RSIVSSYPGTTRDYIE 262
>gi|221505148|gb|EEE30802.1| GTP-binding protein enga, putative [Toxoplasma gondii VEG]
Length = 990
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 19/83 (22%)
Query: 26 DLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEI 85
D ++ + V G TN GKSTLFN+ + D A SP GTT ++L
Sbjct: 506 DALVQTGVTVVFCGPTNAGKSTLFNSLVGRD-----------TAIVSPIAGTTRDVLTAP 554
Query: 86 IKIQTVCKVKELGKKILLSQVKG 108
I++ G K+LL+ G
Sbjct: 555 IQLS--------GSKVLLTDTAG 569
>gi|237836819|ref|XP_002367707.1| hypothetical protein TGME49_004350 [Toxoplasma gondii ME49]
gi|211965371|gb|EEB00567.1| hypothetical protein TGME49_004350 [Toxoplasma gondii ME49]
Length = 990
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 19/83 (22%)
Query: 26 DLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEI 85
D ++ + V G TN GKSTLFN+ + D A SP GTT ++L
Sbjct: 506 DALVQTGVTVVFCGPTNAGKSTLFNSLVGRD-----------TAIVSPIAGTTRDVLTAP 554
Query: 86 IKIQTVCKVKELGKKILLSQVKG 108
I++ G K+LL+ G
Sbjct: 555 IQLS--------GSKVLLTDTAG 569
>gi|392408106|ref|YP_006444714.1| tRNA modification GTPase TrmE [Anaerobaculum mobile DSM 13181]
gi|390621242|gb|AFM22389.1| tRNA modification GTPase TrmE [Anaerobaculum mobile DSM 13181]
Length = 462
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 11/52 (21%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
V +VG NVGKS++FNA L +RA +P PGTT ++++ +I
Sbjct: 229 VAIVGRPNVGKSSIFNALLDE-----------TRAIVTPIPGTTRDIVEGMI 269
>gi|309807087|ref|ZP_07701066.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 03V1-b]
gi|308166517|gb|EFO68717.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 03V1-b]
Length = 431
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA---TTSPWPGTTL------------ 79
V LVG NVGKST+FN + S + ++ ++R + W G
Sbjct: 6 VALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGITFED 65
Query: 80 NLLKEIIKIQTVCKVKELGKKILLSQVKG--KNMSKTEKKPL 119
N+++E IK Q + E +LLS V G N+ +T K L
Sbjct: 66 NVIEEQIKTQAEIAINEADVIVLLSDVTGHVTNLDETIAKIL 107
>gi|221483862|gb|EEE22166.1| GTPase mss1/trme, putative [Toxoplasma gondii GT1]
Length = 981
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 19/83 (22%)
Query: 26 DLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEI 85
D ++ + V G TN GKSTLFN+ + D A SP GTT ++L
Sbjct: 497 DALVQTGVTVVFCGPTNAGKSTLFNSLVGRD-----------TAIVSPIAGTTRDVLTAP 545
Query: 86 IKIQTVCKVKELGKKILLSQVKG 108
I++ G K+LL+ G
Sbjct: 546 IQLS--------GSKVLLTDTAG 560
>gi|399218226|emb|CCF75113.1| unnamed protein product [Babesia microti strain RI]
Length = 582
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 35 VYLVGCTNVGKSTLFNAFL----QSDLCKIKASDLISRATTSPWPGTTL 79
+Y+VG NVGKSTL N FL ++ I + + T S PGTTL
Sbjct: 306 IYVVGSVNVGKSTLVNRFLTYVGYKEIGTIFSKRAVGGITRSSVPGTTL 354
>gi|325912018|ref|ZP_08174420.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 143-D]
gi|325476203|gb|EGC79367.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 143-D]
Length = 435
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRA---TTSPWPGTTL------------ 79
V LVG NVGKST+FN + S + ++ ++R + W G
Sbjct: 6 VALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGITFED 65
Query: 80 NLLKEIIKIQTVCKVKELGKKILLSQVKG--KNMSKTEKKPL 119
N+++E IK Q + E +LLS V G N+ +T K L
Sbjct: 66 NVIEEQIKTQAEIAINEADVIVLLSDVTGHVTNLDETIAKIL 107
>gi|154249877|ref|YP_001410702.1| HSR1-like GTP-binding protein [Fervidobacterium nodosum Rt17-B1]
gi|154153813|gb|ABS61045.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1]
Length = 376
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 12/55 (21%)
Query: 33 GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
G++ ++G TNVGKS+L S + T SP+PGTT+ ++K +K
Sbjct: 165 GEMLVLGVTNVGKSSLLKKLTNS------------KVTVSPYPGTTIGIVKHKLK 207
>gi|449448988|ref|XP_004142247.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 566
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 21 NIVSADLVLSSA-GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
N+V + L+ A G+V+ +G N GKSTL N+ + K I++ T +P PGTTL
Sbjct: 288 NLVEDVIELAGARGNVWAIGAQNAGKSTLINSIGKHVGGK------ITQLTEAPVPGTTL 341
Query: 80 NLLK 83
+++
Sbjct: 342 GIIR 345
>gi|301112340|ref|XP_002905249.1| GTPase, putative [Phytophthora infestans T30-4]
gi|262095579|gb|EEY53631.1| GTPase, putative [Phytophthora infestans T30-4]
Length = 314
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 30 SSAGD-VYLVGCTNVGKSTLFNAFLQ-SDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
S+AG V +VG NVGKS+L N F + S+ K+ SRAT P PG T+ +IIK
Sbjct: 125 STAGSMVMVVGIPNVGKSSLINEFRRLSNSGKLAKGR--SRATVGPTPGVTVR--NDIIK 180
Query: 88 IQ 89
+
Sbjct: 181 VN 182
>gi|374339664|ref|YP_005096400.1| ribosome-associated GTPase EngA [Marinitoga piezophila KA3]
gi|372101198|gb|AEX85102.1| ribosome-associated GTPase EngA [Marinitoga piezophila KA3]
Length = 443
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 21/94 (22%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCKV 94
V L+G N GKS+LFNA I RA S PGTT + + E+++I
Sbjct: 182 VALIGRANAGKSSLFNAITG-----------IERAIVSNVPGTTRDTIDELVEIN----- 225
Query: 95 KELGKKILLSQVKG-KNMSKTEKKPLQPQYSLIK 127
G+K L G K SKT+ ++ YS ++
Sbjct: 226 ---GQKYLFVDTAGLKRKSKTKYGSVE-MYSTVR 255
>gi|225165530|ref|ZP_03727352.1| GTP-binding protein Obg/CgtA [Diplosphaera colitermitum TAV2]
gi|224800228|gb|EEG18636.1| GTP-binding protein Obg/CgtA [Diplosphaera colitermitum TAV2]
Length = 399
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 27 LVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEII 86
L+L S DV LVG N GKS+L N + +R+ T+P+P TTL +I
Sbjct: 192 LILKSIADVGLVGFPNAGKSSLTNLITK------------ARSKTAPYPFTTLQPQIGVI 239
Query: 87 KIQTVCKVKELGKKILLSQVKGKNMSKTEKKPL 119
+ E ++LL+ V G +E + L
Sbjct: 240 ------EYPETYDRLLLADVPGLIEGASENRGL 266
>gi|449503485|ref|XP_004162026.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 568
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 21 NIVSADLVLSSA-GDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
N+V + L+ A G+V+ +G N GKSTL N+ + I++ T +P PGTTL
Sbjct: 288 NLVEDVIELAGARGNVWAIGAQNAGKSTLINSIGK------HVGGKITQLTEAPVPGTTL 341
Query: 80 NLLK 83
+++
Sbjct: 342 GIIR 345
>gi|217077884|ref|YP_002335602.1| GTP-binding protein EngA [Thermosipho africanus TCF52B]
gi|226741195|sp|B7IE34.1|DER_THEAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|217037739|gb|ACJ76261.1| GTP-binding protein EngA [Thermosipho africanus TCF52B]
Length = 439
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 20/86 (23%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCKV 94
V +G N GKSTLFN+ L + R +P PGTT + + E++ I
Sbjct: 184 VSFIGRPNAGKSTLFNSILNKE-----------RVLVTPIPGTTRDSVDELVTIN----- 227
Query: 95 KELGKKILLSQVKG-KNMSKTEKKPL 119
G+K L G + SK + K L
Sbjct: 228 ---GRKYLFVDTAGLRRKSKVDYKSL 250
>gi|294781805|ref|ZP_06747138.1| tRNA modification GTPase TrmE [Fusobacterium sp. 1_1_41FAA]
gi|294481915|gb|EFG29683.1| tRNA modification GTPase TrmE [Fusobacterium sp. 1_1_41FAA]
Length = 455
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 11/55 (20%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
++G NVGKS++ N+ L+ D RA + PGTT ++++E+I I ++
Sbjct: 224 IIGKPNVGKSSILNSLLRED-----------RAIVTHIPGTTRDIIEEVININSI 267
>gi|220933188|ref|YP_002510096.1| tRNA modification GTPase TrmE [Halothermothrix orenii H 168]
gi|219994498|gb|ACL71101.1| tRNA modification GTPase TrmE [Halothermothrix orenii H 168]
Length = 463
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 18/72 (25%)
Query: 27 LVLSSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTL 79
L S G +Y +VG NVGKS+L N+ +Q + RA + PGTT
Sbjct: 213 LATSDQGKIYQEGLKAVIVGKPNVGKSSLLNSLVQEN-----------RAIVTDIPGTTR 261
Query: 80 NLLKEIIKIQTV 91
++++E I I+ +
Sbjct: 262 DIIEEYINIRGI 273
>gi|419760476|ref|ZP_14286755.1| GTP-binding protein Der [Thermosipho africanus H17ap60334]
gi|407514579|gb|EKF49394.1| GTP-binding protein Der [Thermosipho africanus H17ap60334]
Length = 439
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 20/86 (23%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCKV 94
V +G N GKSTLFN+ L + R +P PGTT + + E++ I
Sbjct: 184 VSFIGRPNAGKSTLFNSILNKE-----------RVLVTPIPGTTRDSVDELVTIN----- 227
Query: 95 KELGKKILLSQVKG-KNMSKTEKKPL 119
G+K L G + SK + K L
Sbjct: 228 ---GRKYLFVDTAGLRRKSKVDYKSL 250
>gi|322434484|ref|YP_004216696.1| ribosome-associated GTPase EngA [Granulicella tundricola MP5ACTX9]
gi|321162211|gb|ADW67916.1| ribosome-associated GTPase EngA [Granulicella tundricola MP5ACTX9]
Length = 622
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 11/53 (20%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIK 87
V ++G NVGKSTL NA ++D RA SP GTT + + EI++
Sbjct: 349 VAIIGRPNVGKSTLLNALTETD-----------RAIVSPIAGTTRDAVDEIVE 390
>gi|147679252|ref|YP_001213467.1| tRNA modification GTPase TrmE [Pelotomaculum thermopropionicum SI]
gi|189036204|sp|A5CY46.1|MNME_PELTS RecName: Full=tRNA modification GTPase MnmE
gi|146275349|dbj|BAF61098.1| predicted GTPase [Pelotomaculum thermopropionicum SI]
Length = 459
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 30 SSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
+ AG +Y ++G NVGKS+L NA L+ + RA + PGTT +++
Sbjct: 211 AEAGKIYREGISTVIIGRPNVGKSSLLNALLREN-----------RAIVTDIPGTTRDII 259
Query: 83 KEIIKIQTV 91
+E I I+ +
Sbjct: 260 EEYINIRGI 268
>gi|256810489|ref|YP_003127858.1| translation-associated GTPase [Methanocaldococcus fervens AG86]
gi|256793689|gb|ACV24358.1| GTPase of unknown function domain protein [Methanocaldococcus
fervens AG86]
Length = 391
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Query: 37 LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTVCKVKE 96
LVG NVGKST+FNA + A +P TT+ K I I + C KE
Sbjct: 4 LVGKPNVGKSTMFNALTEKP------------AEIGNYPFTTIQPNKGIAYITSSCPCKE 51
Query: 97 LGKK 100
LG K
Sbjct: 52 LGVK 55
>gi|323453654|gb|EGB09525.1| hypothetical protein AURANDRAFT_71340 [Aureococcus anophagefferens]
Length = 1193
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 18/27 (66%), Positives = 19/27 (70%)
Query: 32 AGDVYLVGCTNVGKSTLFNAFLQSDLC 58
AG V +VG NVGKSTL NA L DLC
Sbjct: 870 AGFVGVVGSPNVGKSTLTNALLGQDLC 896
>gi|269218471|ref|ZP_06162325.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 848
str. F0332]
gi|269211582|gb|EEZ77922.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 848
str. F0332]
Length = 560
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 20/113 (17%)
Query: 6 ALEGR------EVILVARPEPNIVSADLVLSSAGDVYLVGCTNVGKSTLFNAFLQSDLCK 59
AL GR + +L A PE + V+A L V L+G NVGKS+L N S+
Sbjct: 264 ALHGRGTGDLLDAVLAALPERSAVAAALP-EGPRRVALLGRPNVGKSSLLNRLAGSE--- 319
Query: 60 IKASDLISRATTSPWPGTTLNLLKEIIKI--QTVCKVKELGKKILLSQVKGKN 110
R P GTT + + E I++ QT V G + + Q KG +
Sbjct: 320 --------RVVVDPTAGTTRDPVDEAIELDGQTWIFVDTAGIRRRVHQTKGAD 364
>gi|410666407|ref|YP_006918778.1| tRNA modification GTPase MnmE [Thermacetogenium phaeum DSM 12270]
gi|409104154|gb|AFV10279.1| tRNA modification GTPase MnmE [Thermacetogenium phaeum DSM 12270]
Length = 489
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 18/69 (26%)
Query: 30 SSAGDVY-------LVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLL 82
S AG +Y LVG NVGKSTL N L + RA + PGTT +++
Sbjct: 241 SRAGRIYREGLKTVLVGKPNVGKSTLLNTLLGEE-----------RALVTDIPGTTRDII 289
Query: 83 KEIIKIQTV 91
+E I ++ +
Sbjct: 290 EEAINLEGI 298
>gi|304383244|ref|ZP_07365715.1| tRNA modification GTPase TrmE [Prevotella marshii DSM 16973]
gi|304335626|gb|EFM01885.1| tRNA modification GTPase TrmE [Prevotella marshii DSM 16973]
Length = 460
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
Query: 29 LSSAGDVYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKI 88
L S V +VG TNVGKSTL N L+ + RA S GTT +++++ ++I
Sbjct: 222 LKSGVSVAIVGKTNVGKSTLLNRLLKEE-----------RAIVSEIHGTTRDVIEDTMQI 270
Query: 89 QTV 91
+ V
Sbjct: 271 RGV 273
>gi|85709802|ref|ZP_01040867.1| tRNA modification GTPase [Erythrobacter sp. NAP1]
gi|85688512|gb|EAQ28516.1| tRNA modification GTPase [Erythrobacter sp. NAP1]
Length = 428
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLKEIIKIQTV 91
V L G N GKSTLFNA ++S+ A TSP GTT ++++ + I V
Sbjct: 219 VVLAGPPNAGKSTLFNALIESE-----------AAITSPIAGTTRDVIERSVAIGGV 264
>gi|289524240|ref|ZP_06441094.1| tRNA modification GTPase TrmE [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502896|gb|EFD24060.1| tRNA modification GTPase TrmE [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 462
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 11/49 (22%)
Query: 35 VYLVGCTNVGKSTLFNAFLQSDLCKIKASDLISRATTSPWPGTTLNLLK 83
V +VG NVGKS++FNA L+ +RA +P PGTT ++++
Sbjct: 229 VAIVGRPNVGKSSIFNALLEE-----------TRAIVTPIPGTTRDIIE 266
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,743,547,496
Number of Sequences: 23463169
Number of extensions: 57698474
Number of successful extensions: 275510
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 631
Number of HSP's that attempted gapping in prelim test: 274178
Number of HSP's gapped (non-prelim): 1191
length of query: 127
length of database: 8,064,228,071
effective HSP length: 93
effective length of query: 34
effective length of database: 10,177,120,650
effective search space: 346022102100
effective search space used: 346022102100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)