RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18216
(487 letters)
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 126 bits (315), Expect = 3e-32
Identities = 53/289 (18%), Positives = 103/289 (35%), Gaps = 15/289 (5%)
Query: 3 GFTNKMTFLERLQNYVFIFFMHFYMNRVVIQGQNELAKKYFNHTGKPTIQEMARNKSILL 62
G + L + +V N L + + G+ + A +
Sbjct: 158 GIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFE 217
Query: 63 LTNSWLYQYPRPVFPNTINVGPTHIGDTKPLPEDLATWIEGAEKGVIYFSLGSNMRSASL 122
+ L + +N+GP ++ P+ + ++ ++ + + + +
Sbjct: 218 ELDDSLTNDLKSKLKTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTT 277
Query: 123 EESKRSAILTTFAKFPQYRVIWKWEEEQLPGLPS--------NVICRKWLPQHDLLAHPK 174
L+ + + IW ++ LP + W PQ ++LAH
Sbjct: 278 PPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEA 337
Query: 175 IKLFITQGGLQSLQESVYFEVPLIGIPFFGDQDYNVKII-KNLGIGTYMDFDSVSTEVLY 233
+ F+T G SL ESV VPLI PFFGDQ N +++ L IG ++ + L
Sbjct: 338 VGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLM 397
Query: 234 NLMKEVLYNTSYMDTVKRISALSKTQMM------SPRDTAVWWIEYVLK 276
+ ++L + + AL +T S + + ++ V K
Sbjct: 398 SCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 446
Score = 84.0 bits (206), Expect = 4e-18
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 324 HPNIKLFITQGGLQSLQESVYFEVPLIGIPFFGDQDYNVKII-KNLGIGTYMTFDSINAE 382
H + F+T G SL ESV VPLI PFFGDQ N +++ L IG +
Sbjct: 335 HEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKS 394
Query: 383 NLYSNVKEILYNNSYMDTVKRISALSKTQMM------SPRDTAVWWIEYVLK 428
L S +IL + + AL +T S + + ++ V K
Sbjct: 395 GLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 446
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 113 bits (283), Expect = 4e-28
Identities = 34/277 (12%), Positives = 77/277 (27%), Gaps = 16/277 (5%)
Query: 1 MIGFTNKMTFLERLQNYVFIFFMHFYMNRVVIQGQNELAKKYFNHTGKPTIQEMARNKSI 60
+G + ++ + + G + I
Sbjct: 139 PLGEPSTQDTIDIPAQWERNNQSAYQR----YGGLLNSHRDAIGLPPVEDIFTFGYTDHP 194
Query: 61 LLLTNSWLYQYPRPVFPNTINVGPTHIGDTKPLPEDLATWIEGAEKGVIYFSLGSNMRSA 120
+ + L +P + + G + D +PL +LA +++ V +
Sbjct: 195 WVAADPVL-APLQPTDLDAVQTGAWILPDERPLSPELAAFLDAGPPPVYLGFGSLGAPAD 253
Query: 121 SLEESKRSAILTTFAKFPQY-RVIWKWEEEQLPGLPSNVICRKWLPQHDLLAHPKIKLFI 179
++ + + + W + LP ++ + L + I
Sbjct: 254 AVRV-----AIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGR--VAAVI 306
Query: 180 TQGGLQSLQESVYFEVPLIGIPFFGDQDYNVKIIKNLGIGTYMDFDSVSTEVLYNLMKEV 239
GG + + P I +P DQ Y + LG+G D + + L +
Sbjct: 307 HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA 366
Query: 240 LYNTSYMDTVKRISALSKTQMMSPRDTAVWWIEYVLK 276
L ++ +T A ++ V +
Sbjct: 367 L-TPETHARATAVAGTIRTD--GAAVAARLLLDAVSR 400
Score = 67.4 bits (163), Expect = 9e-13
Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 3/105 (2%)
Query: 324 HPNIKLFITQGGLQSLQESVYFEVPLIGIPFFGDQDYNVKIIKNLGIGTYMTFDSINAEN 383
+ I GG + + P I +P DQ Y + LG+G ++
Sbjct: 299 FGRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDS 358
Query: 384 LYSNVKEILYNNSYMDTVKRISALSKTQMMSPRDTAVWWIEYVLK 428
L + + L ++ +T A ++ V +
Sbjct: 359 LSAALATAL-TPETHARATAVAGTIRTD--GAAVAARLLLDAVSR 400
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 113 bits (282), Expect = 5e-28
Identities = 40/256 (15%), Positives = 75/256 (29%), Gaps = 17/256 (6%)
Query: 3 GFTNKMTFLERLQNYVFIFFMHFYMNRVVIQGQNELAKKYFNHTGKPTIQEMARNKSILL 62
G T+ E + R + + + LL
Sbjct: 147 GVTDIRVLWEERAARFADRYGPTLNRR----------RAEIGLPPVEDVFGYGHGERPLL 196
Query: 63 LTNSWLYQYPRPVFPNTINVGPTHIGDTKPLPEDLATWIEGAEKGVIYFSLGSNMRSASL 122
+ L + + G + D +PLP +L ++ ++ GS+
Sbjct: 197 AADPVLAP--LQPDVDAVQTGAWLLSDERPLPPELEAFLAAGSP-PVHIGFGSSSGRGIA 253
Query: 123 EESKRSAILTTFAKFPQYRVIWKWEEEQLPGLPSNVICRKWLPQHDLLAHPKIKLFITQG 182
+ +K + + + W E LP + + L + I G
Sbjct: 254 DAAKVAVEAIRAQG-RRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRR--VAAVIHHG 310
Query: 183 GLQSLQESVYFEVPLIGIPFFGDQDYNVKIIKNLGIGTYMDFDSVSTEVLYNLMKEVLYN 242
+ + VP + IP DQ Y + LGIG D + + E L + VL
Sbjct: 311 SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVL-A 369
Query: 243 TSYMDTVKRISALSKT 258
+ ++ + T
Sbjct: 370 PETRARAEAVAGMVLT 385
Score = 66.6 bits (161), Expect = 2e-12
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 327 IKLFITQGGLQSLQESVYFEVPLIGIPFFGDQDYNVKIIKNLGIGTYMTFDSINAENLYS 386
+ I G + + VP + IP DQ Y + LGIG + E+L +
Sbjct: 303 VAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSA 362
Query: 387 NVKEILYNNSYMDTVKRISALSKT 410
+ +L + ++ + T
Sbjct: 363 ALTTVL-APETRARAEAVAGMVLT 385
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 107 bits (267), Expect = 5e-26
Identities = 33/268 (12%), Positives = 74/268 (27%), Gaps = 16/268 (5%)
Query: 17 YVFIFFMHFYMNRVVIQGQNELAKKYFNHTGKPTIQEMA--RNKSILLLTNSWLYQYPRP 74
N+ + + + G P ++ + L + RP
Sbjct: 131 SEQSQAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRP 190
Query: 75 VFPNTINVGPTHIGDTKPLPEDLATWIEGAEKGVIYFSLGSNMRSASLEESKRSAILTTF 134
T+ G + D +PL +L ++ V G S +
Sbjct: 191 TDLGTVQTGAWILPDERPLSAELEAFLAAGSTPVYV---GFGSSSRPATADAAKMAIKAV 247
Query: 135 AKFPQYRVIWK-WEEEQLPGLPSNVICRKWLPQHDLLAHPKIKLFITQGGLQSLQESVYF 193
+ V+ + W + LP ++ + +L + I + ++
Sbjct: 248 RASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELFGR--VAAAIHHDSAGTTLLAMRA 305
Query: 194 EVPLIGIPFFGD----QDYNVKIIKNLGIGTYMDFDSVSTEVLYNLMKEVLYNTSYMDTV 249
+P I + D Q Y+ + LG+G +D + + L + L
Sbjct: 306 GIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTAL-APEIRARA 364
Query: 250 KRISALSKTQMMSPRDTAVWWIEYVLKS 277
++ + A + +
Sbjct: 365 TTVADTIRA---DGTTVAAQLLFDAVSL 389
Score = 57.8 bits (138), Expect = 1e-09
Identities = 14/187 (7%), Positives = 41/187 (21%), Gaps = 23/187 (12%)
Query: 262 SPRDTAVWWIEYVLKSGGNLRHLQPDHWDMPWYQYFGLDVFLVLLSPVILVLYGIYKIIS 321
P + + + + ++L ++
Sbjct: 207 RPLSAELEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWADLVLP 266
Query: 322 RSHPNIK---------------LFITQGGLQSLQESVYFEVPLIGIPFFGD----QDYNV 362
+ I + ++ +P I + D Q Y+
Sbjct: 267 DDGADCFVVGEVNLQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHA 326
Query: 363 KIIKNLGIGTYMTFDSINAENLYSNVKEILYNNSYMDTVKRISALSKTQMMSPRDTAVWW 422
+ LG+G + ++L + + L ++ + A
Sbjct: 327 DRVAELGVGVAVDGPVPTIDSLSAALDTAL-APEIRARATTVADTIRA---DGTTVAAQL 382
Query: 423 IEYVLKS 429
+ +
Sbjct: 383 LFDAVSL 389
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 102 bits (253), Expect = 6e-24
Identities = 50/263 (19%), Positives = 79/263 (30%), Gaps = 12/263 (4%)
Query: 4 FTNKMTFLERLQNYVFIFFMHFYMNRVVIQGQNELAKKYFNHTGKPTIQEMARNKSILLL 63
+ R N I F + + FN I ++ +
Sbjct: 188 RLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTIPSIYP 247
Query: 64 TNSWLYQYPRPVFPNTINVGPTHIGDTKPLPEDLATWIEGAEKGVIYFSLGSNMRS---- 119
+ P + K E L V+Y + GS
Sbjct: 248 IGPLPSLLKQT--PQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQ 305
Query: 120 ----ASLEESKRSAILTTFAKFPQYRVIWKWEEEQLPGLPSNVICRKWLPQHDLLAHPKI 175
A + + + L + E + + W PQ +L HP I
Sbjct: 306 LLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSI 365
Query: 176 KLFITQGGLQSLQESVYFEVPLIGIPFFGDQDYNVK-IIKNLGIGTYMDFDSVSTEVLYN 234
F+T G S ES+ VP++ PFF DQ + + I IG +D +V E L
Sbjct: 366 GGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAK 424
Query: 235 LMKEVLYNTSYMDTVKRISALSK 257
L+ EV+ ++ L K
Sbjct: 425 LINEVIAGDKGKKMKQKAMELKK 447
Score = 62.5 bits (150), Expect = 4e-11
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 324 HPNIKLFITQGGLQSLQESVYFEVPLIGIPFFGDQDYNVK-IIKNLGIGTYMTFDSINAE 382
HP+I F+T G S ES+ VP++ PFF DQ + + I IG + ++ E
Sbjct: 362 HPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKRE 420
Query: 383 NLYSNVKEILYNNSYMDTVKRISALSK 409
L + E++ + ++ L K
Sbjct: 421 ELAKLINEVIAGDKGKKMKQKAMELKK 447
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 90.6 bits (223), Expect = 4e-20
Identities = 44/277 (15%), Positives = 96/277 (34%), Gaps = 21/277 (7%)
Query: 1 MIGFTNKMTFLERLQNYVFIFFMH--FYMNRVVIQGQNELAKKYFNHTGKPTIQEMARNK 58
+++ + + N V + + +LA+++ + G +
Sbjct: 164 DSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQ 223
Query: 59 SIL--LLTNSWLYQYPRPVFPNTINVGPTHIGDTKPLPEDLATWIEGAEKGVIYFSLGSN 116
S + L + V P G + + + + W++ + F
Sbjct: 224 SSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFL-CFG 282
Query: 117 MRSASLEESKRSAILTTFAKFPQYRVIWKW--------EEEQLPGLPSNVICRKWLPQHD 168
S S+ I + + L + W PQ +
Sbjct: 283 SMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVE 342
Query: 169 LLAHPKIKLFITQGGLQSLQESVYFEVPLIGIPFFGDQDYNVK-IIKNLGIGTYMDFDS- 226
+LAH I F++ G S+ ES++F VP++ P + +Q N ++K G+G + D
Sbjct: 343 VLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR 402
Query: 227 -----VSTEVLYNLMKEVLYNTSYM-DTVKRISALSK 257
V+ E + +K+++ S + V+ + +S+
Sbjct: 403 KGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSR 439
Score = 59.0 bits (141), Expect = 5e-10
Identities = 28/141 (19%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 279 GNLRHLQPDHWDMPWYQYFGLDVFL--VLLSPVILVLYGIYKIISRSHPNIKLFITQGGL 336
G W + + FL + L ++ ++ +H I F++ G
Sbjct: 299 GLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGW 358
Query: 337 QSLQESVYFEVPLIGIPFFGDQDYNVK-IIKNLGIGTYMTFDS------INAENLYSNVK 389
S+ ES++F VP++ P + +Q N ++K G+G + D + AE + +K
Sbjct: 359 NSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLK 418
Query: 390 EILYNNSYM-DTVKRISALSK 409
+++ +S + V+ + +S+
Sbjct: 419 DLMDKDSIVHKKVQEMKEMSR 439
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 88.7 bits (218), Expect = 2e-19
Identities = 39/284 (13%), Positives = 78/284 (27%), Gaps = 32/284 (11%)
Query: 3 GFTNKMTFLERLQNYVFIFFMHFYMNRVVIQGQNELAKKYFNHTGKPTIQEMARNKSILL 62
T + + F + K + + + +
Sbjct: 159 ELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAI 218
Query: 63 LTNSWLYQYPRPVFPNTINVGPTHIGDTKPLPEDLATWIEGAEKGVIYFSLGSNMRSASL 122
PV+P V + + W++ G + + + + +
Sbjct: 219 KALQEPGLDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTC 278
Query: 123 EESKRSAILTTFAKFPQYRVIWKW-------------------EEEQLP------GLPSN 157
E+ L + R +W LP
Sbjct: 279 EQLN---ELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRG 335
Query: 158 VICRKWLPQHDLLAHPKIKLFITQGGLQSLQESVYFEVPLIGIPFFGDQDYNVKII-KNL 216
+ W PQ +LAHP F+T G S ESV +PLI P + +Q N ++ +++
Sbjct: 336 FVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDI 395
Query: 217 GIGTYMDFD---SVSTEVLYNLMKEVLYNTSYMDTVKRISALSK 257
V E + ++K ++ ++ L +
Sbjct: 396 RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKE 439
Score = 57.1 bits (136), Expect = 2e-09
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 324 HPNIKLFITQGGLQSLQESVYFEVPLIGIPFFGDQDYNVKII-KNLGIGTYMTFD---SI 379
HP+ F+T G S ESV +PLI P + +Q N ++ +++ +
Sbjct: 350 HPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLV 409
Query: 380 NAENLYSNVKEILYNNSYMDTVKRISALSK 409
E + VK ++ ++ L +
Sbjct: 410 RREEVARVVKGLMEGEEGKGVRNKMKELKE 439
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 30.2 bits (67), Expect = 0.32
Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 1/115 (0%)
Query: 373 YMTFDSINAENLYSNVKEILYNNSYMDTVKRISALSKTQMMSPRDTAVWWIEYVLKSGGN 432
M SI L K+ V + + + ++
Sbjct: 43 GMNVASIKLHPLDGTNKDKQDWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMK 102
Query: 433 LRHLQPDYWDMPWYQYYGLDVFLVLLSPVILVLYGIYKIISISRRKSSGEKLKKS 487
M +YG+ + L P +L +GI I+ + + + ++L+KS
Sbjct: 103 NLCRVHPVSTMV-KDFYGIKDNVFLSLPCVLNDHGISNIVKMKLKPNEEQQLQKS 156
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 27.4 bits (60), Expect = 2.8
Identities = 23/137 (16%), Positives = 40/137 (29%), Gaps = 13/137 (9%)
Query: 358 QDYNVKIIKNLGIGTYMT--FDSINAENLYSNVKEILYNNSYMDTVKR----ISALSKTQ 411
+D ++ G F +I+ + + T K ++ L
Sbjct: 22 KDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLKTGS 81
Query: 412 MMSPRDTAVW-WIEYVLKSGGNLRHLQPDYWDMPWYQYYGLDVFLVLLSPVILVLYGIYK 470
A +E VLK R + + Y + PVIL G+ K
Sbjct: 82 AYYAPAAATAQMVEAVLKDKK--RVMPVAAYLTGQYGLNDI----YFGVPVILGAGGVEK 135
Query: 471 IISISRRKSSGEKLKKS 487
I+ + + L S
Sbjct: 136 ILELPLNEEEMALLNAS 152
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 27.5 bits (60), Expect = 2.8
Identities = 13/95 (13%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 393 YNNSYMDTVKRISALSKTQMMSPRDTAVWWIEYVLKSGGNLRHLQPDYWDMPWYQYYGLD 452
++ + KR + + + + +++S + + + Y
Sbjct: 64 ILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESI--FFDEKRVLTLSVYLEDYLGV 121
Query: 453 VFLVLLSPVILVLYGIYKIISISRRKSSGEKLKKS 487
L + PV L +G+ +I+ ++ + E +KS
Sbjct: 122 KDLCISVPVTLGKHGVERILELNLNEEELEAFRKS 156
>d3bgea1 a.80.1.2 (A:251-434) Uncharacterized protein NTHI1458
{Haemophilus influenzae [TaxId: 727]}
Length = 184
Score = 26.4 bits (58), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 252 ISALSKTQMMSPRDTAVWWIEYVLKSGGNLRHL 284
ISAL K+ S D A++W +L +GG+ ++
Sbjct: 8 ISALHKSVRGSAPDAALYWYARILTAGGDPLYV 40
Score = 26.4 bits (58), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 404 ISALSKTQMMSPRDTAVWWIEYVLKSGGNLRHL 436
ISAL K+ S D A++W +L +GG+ ++
Sbjct: 8 ISALHKSVRGSAPDAALYWYARILTAGGDPLYV 40
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 25.6 bits (55), Expect = 9.9
Identities = 8/56 (14%), Positives = 20/56 (35%)
Query: 432 NLRHLQPDYWDMPWYQYYGLDVFLVLLSPVILVLYGIYKIISISRRKSSGEKLKKS 487
L+ L+ + + +PV+L G+ ++I + K ++
Sbjct: 99 YLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEA 154
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.139 0.430
Gapped
Lambda K H
0.267 0.0597 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,941,811
Number of extensions: 93333
Number of successful extensions: 264
Number of sequences better than 10.0: 1
Number of HSP's gapped: 257
Number of HSP's successfully gapped: 27
Length of query: 487
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 398
Effective length of database: 1,185,626
Effective search space: 471879148
Effective search space used: 471879148
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.3 bits)