BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18219
(520 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 212/445 (47%), Gaps = 22/445 (4%)
Query: 9 TTSTVKSFDQIPGPKSLPLIGTLHKYLPFIGEYQFDRLHWNGLKKYRKYGPLVKEEIVPG 68
T ++ +PGP + PL+G+L L + + H + ++KYG + + ++
Sbjct: 16 TDGETRNVTDLPGPTNWPLLGSL---LEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSF 72
Query: 69 VSLVWVFTPEDIETVYRCEGRYPERRSHLALEKYRLDRPEVYSTGGLLPTNGKEWCRIRS 128
S V + +P +E +YR E +P+R + YR R E Y GL+ G+EW R+RS
Sbjct: 73 DS-VHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAY---GLMILEGQEWQRVRS 128
Query: 129 ELQKGFSEIKHVRSHLDLVNQVMDEFIELR---IGQRATFQDFLPELSRLYLEIMCLVAF 185
QK + + +N+V+ +F+E +R D EL++ E +CLV +
Sbjct: 129 AFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLY 188
Query: 186 EKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGP-QLWRKFDTPLYKKLKMAHGF 244
EKR F A T S K P +L ++ +T +++ +A
Sbjct: 189 EKR---FGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDT 245
Query: 245 IEEQALKFISQKSSRVASVQTNQATSLLENYLANPKLSRRDIVGMSVDILLAGIDTSAYT 304
I + I + R + Q A L + Y + LS++++ ++ LA ++T+A +
Sbjct: 246 IFKSVKPCIDNRLQRYS--QQPGADFLCDIYQQD-HLSKKELYAAVTELQLAAVETTANS 302
Query: 305 TCFLLYHISRSASAQQRLFSAVKHLKRGSVT--SADYDGCAYAKAVLKETFRLSPISVGV 362
++LY++SR+ AQ+RL V+ + + T + D Y KA LKE+ RL+P
Sbjct: 303 LMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFT 362
Query: 363 GRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYL 422
R L+K TVL Y +P GT+ QV F +F PERWL+++ + ++P+
Sbjct: 363 TRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE---KKINPFA 419
Query: 423 VLPFGHGPRTCIARRSAEQNLQVLI 447
LPFG G R CI RR AE L + +
Sbjct: 420 HLPFGIGKRMCIGRRLAELQLHLAL 444
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 450 TLAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIARRSAE 509
T+ QV F +F PERWL+K+ + ++P+ LPFG G R CI RR AE
Sbjct: 381 TVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE---KKINPFAHLPFGIGKRMCIGRRLAE 437
Query: 510 QNLQVLI 516
L + +
Sbjct: 438 LQLHLAL 444
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 203/458 (44%), Gaps = 34/458 (7%)
Query: 9 TTSTVKSFDQIPGPKSLPLIGTLHKYLPFIGEYQFDRLHWNGLKKYRKYGPLVKEEIVPG 68
+T T + + +IP P + H F E R+H+ ++ ++KYGP+ +E++
Sbjct: 3 STKTPRPYSEIPSPGDNGWLNLYH----FWREKGSQRIHFRHIENFQKYGPIYREKL-GN 57
Query: 69 VSLVWVFTPEDIETVYRCEGRYPERRS---HLALEKYRLDRPEVYSTGGLLPTNGKEWCR 125
+ V++ PED+ +++ EG YPER LA +Y +P G L +G W +
Sbjct: 58 LESVYIIHPEDVAHLFKFEGSYPERYDIPPWLAYHRY-YQKP----IGVLFKKSGT-WKK 111
Query: 126 IRSELQKGFSEIKHVRSHLDLVNQVMDEFIEL---RIGQRATFQ---DFLPELSRLYLEI 179
R L + +++ + L+N V +F+ L RI Q+ + + D +L E
Sbjct: 112 DRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFES 171
Query: 180 MCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKFDTPLYKKLK 239
+ V F +RL + + +L P+L+R F T ++
Sbjct: 172 ITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVP--PELYRLFRTKTWRDHV 229
Query: 240 MAHGFIEEQALKFIS---QKSSRVASVQTNQATSLLENYLANPKLSRRDIVGMSVDILLA 296
A I +A K+ Q R + +L L + K+ D+ ++L
Sbjct: 230 AAWDTIFNKAEKYTEIFYQDLRR--KTEFRNYPGILYCLLKSEKMLLEDVKANITEMLAG 287
Query: 297 GIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKR---GSVTSADYDGCAYAKAVLKETF 353
G++T++ T + LY ++RS + Q+ L V + +R G ++ KA +KET
Sbjct: 288 GVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKM-LQMVPLLKASIKETL 346
Query: 354 RLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDP 413
RL PISV + R + VL Y +PA TL R +F PD+F P RWL +D
Sbjct: 347 RLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKD- 405
Query: 414 AKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
K + + L FG G R C+ RR AE + + ++ L
Sbjct: 406 -KDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHIL 441
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 449 KTLAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIARRSA 508
KTL R +F SPD+F P RWL KD K + + L FG G R C+ RR A
Sbjct: 373 KTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKD--KDLIH-FRNLGFGWGVRQCVGRRIA 429
Query: 509 EQNLQVLIMKI 519
E + + ++ I
Sbjct: 430 ELEMTLFLIHI 440
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 202/459 (44%), Gaps = 35/459 (7%)
Query: 9 TTSTVKSFDQIPGPKSLPLIGTLHKYLPFIGEYQFDRLHWNGLKKYRKYGPLVKEEIVPG 68
+T + + F++IP P + H F E ++H + ++ ++KYGP+ +E++
Sbjct: 1 STRSPRPFNEIPSPGDNGWLNLYH----FWRETGTHKVHLHHVQNFQKYGPIYREKL-GN 55
Query: 69 VSLVWVFTPEDIETVYRCEGRYPERR---SHLALEKYRLDRPEVYSTGGLLPTNGKEWCR 125
V V+V PED+ +++ EG PER +A +Y RP G+L W +
Sbjct: 56 VESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQY-YQRPI-----GVLLKKSAAWKK 109
Query: 126 IRSELQKGFSEIKHVRSHLDLVNQVMDEFIEL------RIGQRATFQDFLPELSRLYLEI 179
R L + + ++ L L++ V +F+ + + G D +L R E
Sbjct: 110 DRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFES 169
Query: 180 MCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTA-NSCVLKTDNGPQLWRKFDTPLYKKL 238
+ V F +R +A Y ++ V + P L+R F T +K
Sbjct: 170 ITNVIFGERQGMLEE---VVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDH 226
Query: 239 KMAHGFIEEQALKFISQ---KSSRVASVQTNQATSLLENYLANPKLSRRDIVGMSVDILL 295
A I +A + + + SV + +L L + K+S DI ++L
Sbjct: 227 VAAWDVIFSKADIYTQNFYWELRQKGSVH-HDYRGILYRLLGDSKMSFEDIKANVTEMLA 285
Query: 296 AGIDTSAYTTCFLLYHISRSASAQQRLFS---AVKHLKRGSVTSADYDGCAYAKAVLKET 352
G+DT++ T + LY ++R+ Q L + A +H +G + + KA +KET
Sbjct: 286 GGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATM-LQLVPLLKASIKET 344
Query: 353 FRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLRED 412
RL PISV + R L + VL Y +PA TL R +F P+ F P RWL +D
Sbjct: 345 LRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD 404
Query: 413 PAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
+ ++ + L FG G R C+ RR AE + + ++ L
Sbjct: 405 ---KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINML 440
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 199/454 (43%), Gaps = 35/454 (7%)
Query: 14 KSFDQIPGPKSLPLIGTLHKYLPFIGEYQFDRLHWNGLKKYRKYGPLVKEEIVPGVSLVW 73
+ F++IP P + H F E ++H + ++ ++KYGP+ +E++ V V+
Sbjct: 3 RPFNEIPSPGDNGWLNLYH----FWRETGTHKVHLHHVQNFQKYGPIYREKL-GNVESVY 57
Query: 74 VFTPEDIETVYRCEGRYPERR---SHLALEKYRLDRPEVYSTGGLLPTNGKEWCRIRSEL 130
V PED+ +++ EG PER +A +Y RP G+L W + R L
Sbjct: 58 VIDPEDVALLFKSEGPNPERFLIPPWVAYHQY-YQRPI-----GVLLKKSAAWKKDRVAL 111
Query: 131 QKGFSEIKHVRSHLDLVNQVMDEFIEL------RIGQRATFQDFLPELSRLYLEIMCLVA 184
+ + ++ L L++ V +F+ + + G D +L R E + V
Sbjct: 112 NQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVI 171
Query: 185 FEKRLHSFTADXXXXXXXXXXXXEAAYTA-NSCVLKTDNGPQLWRKFDTPLYKKLKMAHG 243
F +R +A Y ++ V + P L+R F T +K A
Sbjct: 172 FGERQGMLEE---VVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWD 228
Query: 244 FIEEQALKFISQ---KSSRVASVQTNQATSLLENYLANPKLSRRDIVGMSVDILLAGIDT 300
I +A + + + SV + +L L + K+S DI ++L G+DT
Sbjct: 229 VIFSKADIYTQNFYWELRQKGSVH-HDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDT 287
Query: 301 SAYTTCFLLYHISRSASAQQRLFS---AVKHLKRGSVTSADYDGCAYAKAVLKETFRLSP 357
++ T + LY ++R+ Q L + A +H +G + + KA +KET RL P
Sbjct: 288 TSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATM-LQLVPLLKASIKETLRLHP 346
Query: 358 ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQC 417
ISV + R L + VL Y +PA TL R +F P+ F P RWL +D +
Sbjct: 347 ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD---KN 403
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
++ + L FG G R C+ RR AE + + ++ L
Sbjct: 404 ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINML 437
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 184/446 (41%), Gaps = 39/446 (8%)
Query: 9 TTSTVKSFD---QIPGPKSLPLIGTLHKYLPFIGEYQFDRLHWNGLKKYRKYGPLVKEEI 65
T+STV F+ Q PG + L + L E ++ LH + +++ GP+ + +
Sbjct: 5 TSSTVLPFEAMPQHPGNRWL-------RLLQIWREQGYEHLHLEMHQTFQELGPIFRYNL 57
Query: 66 VPGVSLVWVFTPEDIETVYRCEGRYPERRSHLALEKYRLDRPEVYSTGGLLPTNGKEWCR 125
G +V V PED+E + + + +P R + LE + R G+ NG EW
Sbjct: 58 -GGPRMVCVMLPEDVEKLQQVDSLHPCR---MILEPWVAYRQHRGHKCGVFLLNGPEWRF 113
Query: 126 IRSELQKGFSEIKHVRSHLDLVNQVMDEFIE------LRIGQRATFQDFLPELSRLYLEI 179
R L K V+ L +V+ V +F + L+ + + D P + +E
Sbjct: 114 NRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEA 173
Query: 180 MCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKFDTPLYKKLK 239
L F +RL E + + ++ W ++K+
Sbjct: 174 SNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRW--ISPKVWKEHF 231
Query: 240 MAHGFIEEQALKFISQKSSRVASVQTNQATSLLENYLANPKLSRRDIVGMSVDILLAGID 299
A I + I + +A + T ++ L +LS I S+++ +D
Sbjct: 232 EAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELLLKAELSLEAIKANSMELTAGSVD 291
Query: 300 TSAYTTCFLLYHISRSASAQQRL--------FSAVKHLKRGSVTSADYDGCAYAKAVLKE 351
T+A+ L+ ++R+ QQ L S +H ++ + +A LKE
Sbjct: 292 TTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTE------LPLLRAALKE 345
Query: 352 TFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLRE 411
T RL P+ + + R+++ + VL YH+PAGTL R + FP P+++ P+RWL
Sbjct: 346 TLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLD- 404
Query: 412 DPAKQCVSPYLVLPFGHGPRTCIARR 437
+ + +PFG G R C+ RR
Sbjct: 405 --IRGSGRNFHHVPFGFGMRQCLGRR 428
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 461 RLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIARR 506
R + FP P+++ P+RWL + + +PFG G R C+ RR
Sbjct: 386 RNAALFPRPERYNPQRWLD---IRGSGRNFHHVPFGFGMRQCLGRR 428
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 188/456 (41%), Gaps = 56/456 (12%)
Query: 19 IPGPKSLPLIGTLHKYLPFIGEYQFDRLHWNGLKKYRKYGPLVKEEIVPGVSLVWVFT-P 77
IPGP LP +G + Y G FD ++ ++KYG + G V T P
Sbjct: 18 IPGPTPLPFLGNILSY--HKGFCMFD------MECHKKYGKVWG--FYDGQQPVLAITDP 67
Query: 78 EDIETVY--RCEGRYPERRSHLALEKYRLDRPEVYSTGGLLPTNGKEWCRIRSELQKGFS 135
+ I+TV C + RR P + + +EW R+RS L F+
Sbjct: 68 DMIKTVLVKECYSVFTNRRPF---------GPVGFMKSAISIAEDEEWKRLRSLLSPTFT 118
Query: 136 EIKHVRSHLDLVNQVMDEFI-----ELRIGQRATFQDFLPELSRLYLEIMCLVAFEKRLH 190
K ++ + ++ Q D + E G+ T +D S ++++ +F +
Sbjct: 119 SGK-LKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS---MDVITSTSFGVNID 174
Query: 191 SFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKFDTPLYKKLKMAHGFIEEQAL 250
S + + L P F P+ + L + +
Sbjct: 175 SLNNPQDPFVENTKKLLRFDF-LDPFFLSITVFP-----FLIPILEVLNIC--VFPREVT 226
Query: 251 KFISQ-----KSSRVASVQTNQATSLL--------ENYLANPKLSRRDIVGMSVDILLAG 297
F+ + K SR+ Q ++ L + ++ LS ++V S+ + AG
Sbjct: 227 NFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAG 286
Query: 298 IDTSAYTTCFLLYHISRSASAQQRLFSAVKHL--KRGSVTSADYDGCAYAKAVLKETFRL 355
+T++ F++Y ++ QQ+L + + + T Y V+ ET RL
Sbjct: 287 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL 346
Query: 356 SPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAK 415
PI++ + R+ K+ ++G +P G + + + R +Y+ P++F+PER+ +++ K
Sbjct: 347 FPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN--K 404
Query: 416 QCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
+ PY+ PFG GPR CI R A N+++ +++ L
Sbjct: 405 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVL 440
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 434 IARRSAEQNLQVLIMKTLAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVL 493
+ ++ E N + + + + R +Y+ P++F+PER+ +K+ K + PY+
Sbjct: 356 VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN--KDNIDPYIYT 413
Query: 494 PFGHGPRTCIARRSAEQNLQVLIMKI 519
PFG GPR CI R A N+++ ++++
Sbjct: 414 PFGSGPRNCIGMRFALMNMKLALIRV 439
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 188/456 (41%), Gaps = 56/456 (12%)
Query: 19 IPGPKSLPLIGTLHKYLPFIGEYQFDRLHWNGLKKYRKYGPLVKEEIVPGVSLVWVFT-P 77
IPGP LP +G + Y G FD ++ ++KYG + G V T P
Sbjct: 17 IPGPTPLPFLGNILSY--HKGFCMFD------MECHKKYGKVWG--FYDGQQPVLAITDP 66
Query: 78 EDIETVY--RCEGRYPERRSHLALEKYRLDRPEVYSTGGLLPTNGKEWCRIRSELQKGFS 135
+ I+TV C + RR P + + +EW R+RS L F+
Sbjct: 67 DMIKTVLVKECYSVFTNRRPF---------GPVGFMKSAISIAEDEEWKRLRSLLSPTFT 117
Query: 136 EIKHVRSHLDLVNQVMDEFI-----ELRIGQRATFQDFLPELSRLYLEIMCLVAFEKRLH 190
K ++ + ++ Q D + E G+ T +D S ++++ +F +
Sbjct: 118 SGK-LKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS---MDVITSTSFGVNID 173
Query: 191 SFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKFDTPLYKKLKMAHGFIEEQAL 250
S + + L P F P+ + L + +
Sbjct: 174 SLNNPQDPFVENTKKLLRFDF-LDPFFLSITVFP-----FLIPILEVLNIC--VFPREVT 225
Query: 251 KFISQ-----KSSRVASVQTNQATSLL--------ENYLANPKLSRRDIVGMSVDILLAG 297
F+ + K SR+ Q ++ L + ++ LS ++V S+ + AG
Sbjct: 226 NFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAG 285
Query: 298 IDTSAYTTCFLLYHISRSASAQQRLFSAVKHL--KRGSVTSADYDGCAYAKAVLKETFRL 355
+T++ F++Y ++ QQ+L + + + T Y V+ ET RL
Sbjct: 286 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL 345
Query: 356 SPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAK 415
PI++ + R+ K+ ++G +P G + + + R +Y+ P++F+PER+ +++ K
Sbjct: 346 FPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN--K 403
Query: 416 QCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
+ PY+ PFG GPR CI R A N+++ +++ L
Sbjct: 404 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVL 439
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 434 IARRSAEQNLQVLIMKTLAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVL 493
+ ++ E N + + + + R +Y+ P++F+PER+ +K+ K + PY+
Sbjct: 355 VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN--KDNIDPYIYT 412
Query: 494 PFGHGPRTCIARRSAEQNLQVLIMKI 519
PFG GPR CI R A N+++ ++++
Sbjct: 413 PFGSGPRNCIGMRFALMNMKLALIRV 438
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 188/456 (41%), Gaps = 56/456 (12%)
Query: 19 IPGPKSLPLIGTLHKYLPFIGEYQFDRLHWNGLKKYRKYGPLVKEEIVPGVSLVWVFT-P 77
IPGP LP +G + Y G FD ++ ++KYG + G V T P
Sbjct: 16 IPGPTPLPFLGNILSY--HKGFCMFD------MECHKKYGKVWG--FYDGQQPVLAITDP 65
Query: 78 EDIETVY--RCEGRYPERRSHLALEKYRLDRPEVYSTGGLLPTNGKEWCRIRSELQKGFS 135
+ I+TV C + RR P + + +EW R+RS L F+
Sbjct: 66 DMIKTVLVKECYSVFTNRRPF---------GPVGFMKSAISIAEDEEWKRLRSLLSPTFT 116
Query: 136 EIKHVRSHLDLVNQVMDEFI-----ELRIGQRATFQDFLPELSRLYLEIMCLVAFEKRLH 190
K ++ + ++ Q D + E G+ T +D S ++++ +F +
Sbjct: 117 SGK-LKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS---MDVITSTSFGVNID 172
Query: 191 SFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKFDTPLYKKLKMAHGFIEEQAL 250
S + + L P F P+ + L + +
Sbjct: 173 SLNNPQDPFVENTKKLLRFDF-LDPFFLSITVFP-----FLIPILEVLNIC--VFPREVT 224
Query: 251 KFISQ-----KSSRVASVQTNQATSLL--------ENYLANPKLSRRDIVGMSVDILLAG 297
F+ + K SR+ Q ++ L + ++ LS ++V S+ + AG
Sbjct: 225 NFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAG 284
Query: 298 IDTSAYTTCFLLYHISRSASAQQRLFSAVKHL--KRGSVTSADYDGCAYAKAVLKETFRL 355
+T++ F++Y ++ QQ+L + + + T Y V+ ET RL
Sbjct: 285 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL 344
Query: 356 SPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAK 415
PI++ + R+ K+ ++G +P G + + + R +Y+ P++F+PER+ +++ K
Sbjct: 345 FPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN--K 402
Query: 416 QCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
+ PY+ PFG GPR CI R A N+++ +++ L
Sbjct: 403 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVL 438
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 434 IARRSAEQNLQVLIMKTLAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVL 493
+ ++ E N + + + + R +Y+ P++F+PER+ +K+ K + PY+
Sbjct: 354 VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN--KDNIDPYIYT 411
Query: 494 PFGHGPRTCIARRSAEQNLQVLIMKI 519
PFG GPR CI R A N+++ ++++
Sbjct: 412 PFGSGPRNCIGMRFALMNMKLALIRV 437
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 172/407 (42%), Gaps = 30/407 (7%)
Query: 55 RKYGPLVKEEIVPGVSLVWVFTPEDIETVYRCEGRYPERRSHLALEKYRLDRPEVYSTGG 114
+KYGP+V+ + S++ V +PE ++ + + + AL+ +R ++ G
Sbjct: 21 KKYGPVVRVNVFHKTSVI-VTSPESVKKFLMSTKYNKDSKMYRALQTVFGER--LFGQGL 77
Query: 115 LLPTNGKEWCRIRSELQKGFSEIKHVRSHLDLVNQVMDEFIEL----RIGQR-ATFQDFL 169
+ N + W + R + FS V S ++ N+ ++ +E+ GQ + QD L
Sbjct: 78 VSECNYERWHKQRRVIDLAFSRSSLV-SLMETFNEKAEQLVEILEAKADGQTPVSMQDML 136
Query: 170 PELSRLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRK 229
+ ++I+ AF E + + + K G +
Sbjct: 137 ---TYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGKR---- 189
Query: 230 FDTPLYKKLKMAHGFIEEQALKFISQKSSRVASVQTNQATSLLENYLANPKLSRRD--IV 287
++++ + F+ + ++ ++ + + A +L L + ++ D ++
Sbjct: 190 ---KQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPA-DILTQILKAEEGAQDDEGLL 245
Query: 288 GMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCA---Y 344
V +AG +TSA F + +SR RL + V + GS D++ Y
Sbjct: 246 DNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVI-GSKRYLDFEDLGRLQY 304
Query: 345 AKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFI 404
VLKE+ RL P + G R+L +ET++ G VP T + V R+ YF P F
Sbjct: 305 LSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFN 364
Query: 405 PERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
P+R+ P + + PF G R+CI ++ A+ ++V++ K L
Sbjct: 365 PDRFGPGAPKPR----FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLL 407
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 458 VSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIM 517
V R+ YF P F P+R+ P + + PF G R+CI ++ A+ ++V++
Sbjct: 349 VMGRMDTYFEDPLTFNPDRFGPGAPKPR----FTYFPFSLGHRSCIGQQFAQMEVKVVMA 404
Query: 518 KI 519
K+
Sbjct: 405 KL 406
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 107/239 (44%), Gaps = 8/239 (3%)
Query: 233 PLYKKLKMAHGFIEEQALKFISQKSSRVASVQTNQATSLLENYLANPKLSRRDIVGMSVD 292
P +++ AH I++ K I ++ + T L Y L+ ++ GM +
Sbjct: 200 PSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIG 259
Query: 293 ILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAV---L 349
+LLAG TS+ T+ ++ + ++R + Q++ + K + ++ YD + +
Sbjct: 260 LLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCI 319
Query: 350 KETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWL 409
KET RL P + + R+ ++GY +P G V+ RL + F P+R+L
Sbjct: 320 KETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL 379
Query: 410 REDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLAVTQNQVSCRLSQYFPS 468
+++PA + +PFG G CI A ++ + L + + + + YFP+
Sbjct: 380 QDNPASG--EKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDL---IDGYFPT 433
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 257 SSRVASVQTNQATSLLENYL-------ANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLL 309
+ R+A+ T+++ + + L P+ S +I GM + ++ AG TS+ T + L
Sbjct: 210 NGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTL 269
Query: 310 YHISRSASAQQRLFSAVKHLKRGSVTSADYDG---CAYAKAVLKETFRLSPISVGVGRIL 366
+ R A + + L G S + + VLKET RL P + + R+
Sbjct: 270 IELMRHRDAYAAVIDELDELY-GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVA 328
Query: 367 NKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQ-CVSPYLVLP 425
E + G+ + G L +S R+ + FP P F+P R+ E P ++ ++ + +P
Sbjct: 329 KGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY--EQPRQEDLLNRWTWIP 386
Query: 426 FGHGPRTCIA 435
FG G C+
Sbjct: 387 FGAGRHRCVG 396
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 451 LAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIA 504
L +S R+ + FP P F+P R+ + + ++ + +PFG G C+
Sbjct: 344 LVAASPAISNRIPEDFPDPHDFVPARY-EQPRQEDLLNRWTWIPFGAGRHRCVG 396
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 257 SSRVASVQTNQATSLLENYL-------ANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLL 309
+ R+A+ T+++ + + L P+ S +I GM + ++ AG TS+ T + L
Sbjct: 210 NGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTL 269
Query: 310 YHISRSASAQQRLFSAVKHLKRGSVTSADYDG---CAYAKAVLKETFRLSPISVGVGRIL 366
+ R A + + L G S + + VLKET RL P + + R+
Sbjct: 270 IELMRHRDAYAAVIDELDELY-GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVA 328
Query: 367 NKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQ-CVSPYLVLP 425
E + G+ + G L +S R+ + FP P F+P R+ E P ++ ++ + +P
Sbjct: 329 KGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY--EQPRQEDLLNRWTWIP 386
Query: 426 FGHGPRTCIA 435
FG G C+
Sbjct: 387 FGAGRHRCVG 396
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 451 LAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIA 504
L +S R+ + FP P F+P R+ + + ++ + +PFG G C+
Sbjct: 344 LVAASPAISNRIPEDFPDPHDFVPARY-EQPRQEDLLNRWTWIPFGAGRHRCVG 396
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 257 SSRVASVQTNQATSLLENYL-------ANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLL 309
+ R+A+ T+++ + + L P+ S +I GM + ++ AG TS+ T + L
Sbjct: 210 NGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTL 269
Query: 310 YHISRSASAQQRLFSAVKHLKRGSVTSADYDG---CAYAKAVLKETFRLSPISVGVGRIL 366
+ R A + + L G S + + VLKET RL P + + R+
Sbjct: 270 IELMRHRDAYAAVIDELDELY-GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVA 328
Query: 367 NKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQ-CVSPYLVLP 425
E + G+ + G L +S R+ + FP P F+P R+ E P ++ ++ + +P
Sbjct: 329 KGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY--EQPRQEDLLNRWTWIP 386
Query: 426 FGHGPRTCIA 435
FG G C+
Sbjct: 387 FGAGRHRCVG 396
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 451 LAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIA 504
L +S R+ + FP P F+P R+ + + ++ + +PFG G C+
Sbjct: 344 LVAASPAISNRIPEDFPDPHDFVPARY-EQPRQEDLLNRWTWIPFGAGRHRCVG 396
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 257 SSRVASVQTNQATSLLENYL-------ANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLL 309
+ R+A+ T+++ + + L P+ S +I GM + ++ AG TS+ T + L
Sbjct: 210 NGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTL 269
Query: 310 YHISRSASAQQRLFSAVKHLKRGSVTSADYDG---CAYAKAVLKETFRLSPISVGVGRIL 366
+ R A + + L G S + + VLKET RL P + + R+
Sbjct: 270 IELMRHRDAYAAVIDELDELY-GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVA 328
Query: 367 NKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQ-CVSPYLVLP 425
E + G+ + G L +S R+ + FP P F+P R+ E P ++ ++ + +P
Sbjct: 329 KGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY--EQPRQEDLLNRWTWIP 386
Query: 426 FGHGPRTCIA 435
FG G C+
Sbjct: 387 FGAGRHRCVG 396
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 451 LAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIA 504
L +S R+ + FP P F+P R+ + + ++ + +PFG G C+
Sbjct: 344 LVAASPAISNRIPEDFPDPHDFVPARY-EQPRQEDLLNRWTWIPFGAGRHRCVG 396
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 226 LWRKFDTPLYKKLKMAHGFIEEQALKFISQKSSRVASVQTNQATSLLENYLANPKLSRRD 285
L KF + + K +K + E+ ++ I+ + ++ Q L EN AN +LS
Sbjct: 227 LNEKFYSFMQKMVKEHYKTFEKGHIRDITD-----SLIEHCQEKQLDEN--ANVQLSDEK 279
Query: 286 IVGMSVDILLAGIDTS----AYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDG 341
I+ + +D+ AG DT +++ +L+ + Q+ L + + +R ++ D
Sbjct: 280 IINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLS--DRSH 337
Query: 342 CAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAG-TLAVTQNQVSCRLSQYFPG 399
Y +A + ETFR S + + ++T L G+++P G + V Q Q++ + +
Sbjct: 338 LPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQIN-HDQKLWVN 396
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
P +F+PER+L D A V V+ FG G R CI A
Sbjct: 397 PSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIA 436
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 468 SPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIARRSA 508
+P +F+PER+L D A V V+ FG G R CI A
Sbjct: 396 NPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIA 436
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 281 LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS--AD 338
LS I+ DI AG++T+ + L + + +++L+ + S T +D
Sbjct: 269 LSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISD 328
Query: 339 YDGCAYAKAVLKETFRLSPIS-VGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYF 397
+ +A ++E RL P++ + + N ++ + + V GT + + +
Sbjct: 329 RNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEW 388
Query: 398 PGPDQFIPERWLREDPA-KQCVSPYL-VLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
PDQF+PER+L +PA Q +SP + LPFG GPR+CI A Q L LIM L
Sbjct: 389 HQPDQFMPERFL--NPAGTQLISPSVSYLPFGAGPRSCIGEILARQEL-FLIMAWL 441
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 13/114 (11%)
Query: 406 ERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLAVTQNQVSCRLSQY 465
E +RE + V+P L+ P + I + ++ +V+I A+ N+ +
Sbjct: 336 EATIREVLRLRPVAPMLI-PHKANVDSSIGEFAVDKGTEVII-NLWALHHNE------KE 387
Query: 466 FPSPDQFIPERWLRKDPA-KQCVSPYL-VLPFGHGPRTCIARRSAEQNLQVLIM 517
+ PDQF+PER+L +PA Q +SP + LPFG GPR+CI A Q L LIM
Sbjct: 388 WHQPDQFMPERFL--NPAGTQLISPSVSYLPFGAGPRSCIGEILARQEL-FLIM 438
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 23/229 (10%)
Query: 234 LYKKLKMAHGFIEEQALKFISQKSSRVASVQ-----TNQATSLLENYLANPK--LSRRDI 286
LYKK + + +++ I++K R+++ + + AT L+ LA + L+R ++
Sbjct: 240 LYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELI---LAEKRGDLTRENV 296
Query: 287 VGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKH-LKRGSVTSADYDGCAYA 345
+++L+A DT + + F+L+ I++ + ++ + ++ + + D
Sbjct: 297 NQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKLKVM 356
Query: 346 KAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIP 405
+ + E+ R P+ V R ++ V+ GY V GT + RL ++FP P++F
Sbjct: 357 ENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTL 415
Query: 406 ERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLAVT 454
E + + P + PFG GPR C A + + +++MK + VT
Sbjct: 416 ENFAKNVPYRY------FQPFGFGPRGC-----AGKYIAMVMMKAILVT 453
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 464 QYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKI 519
++FP P++F E + + P + PFG GPR C + A ++ +++ +
Sbjct: 405 EFFPKPNEFTLENFAKNVPYRY------FQPFGFGPRGCAGKYIAMVMMKAILVTL 454
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 20/250 (8%)
Query: 219 KTDNGPQLWRKFDT--------------PLYKKLKMAHGFIEEQALKFISQKSSRVASVQ 264
K PQL+ F+T L+ K + A + + K I + + S +
Sbjct: 163 KVSQNPQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEE 222
Query: 265 TNQATSLLENYLANPKLSRRDIVGMSVDILLAGIDT--SAYTTCFLLYHISRSASAQQRL 322
L N LS ++ + +L AG +T SA ++ LL + + + ++R+
Sbjct: 223 DALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLL--LGQHSDIRERV 280
Query: 323 FSAVKHLKRG-SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGT 381
L+ +T+ Y VL+E RL P G R L ++ G+H P G
Sbjct: 281 RQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGW 340
Query: 382 LAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQ 441
L Q + +P P++F PER+ + A P+ +PFG G R C+ + A
Sbjct: 341 LVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHN-PPFAHVPFGGGLRECLGKEFARL 399
Query: 442 NLQVLIMKTL 451
+++ + +
Sbjct: 400 EMKLFATRLI 409
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 458 VSCRLSQ------YFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIARRSAEQN 511
VS ++SQ +P P++F PER+ D + P+ +PFG G R C+ + A
Sbjct: 342 VSYQISQTHADPDLYPDPEKFDPERF-TPDGSATHNPPFAHVPFGGGLRECLGKEFARLE 400
Query: 512 LQVLIMKI 519
+++ ++
Sbjct: 401 MKLFATRL 408
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 280 KLSRRDIVGMSV-DILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSA- 337
+L D + ++V D+ AG +T++ T + L + + +++L + + S A
Sbjct: 261 RLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAI 320
Query: 338 -DYDGCAYAKAVLKETFR-LSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQ 395
D Y AV+ E R ++ + + ++T+ GY +P GT+ V +Q
Sbjct: 321 KDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQ 380
Query: 396 YFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
FP P++F PE +L E+ K S Y PF G R C A L +L+ L
Sbjct: 381 EFPDPEKFKPEHFLNEN-GKFKYSDYFK-PFSTGKRVCAGEGLARMELFLLLCAIL 434
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 463 SQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKI 519
+Q FP P++F PE +L ++ K S Y PF G R C A L +L+ I
Sbjct: 379 NQEFPDPEKFKPEHFLNEN-GKFKYSDYFK-PFSTGKRVCAGEGLARMELFLLLCAI 433
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 13/198 (6%)
Query: 275 YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQ--QRLFSAVKHLKRG 332
Y ++S ++ GM V + AG TS TT + + H+ + + +L +
Sbjct: 241 YRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ 300
Query: 333 SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
D +A+ ++E+ R P + V R++ E + Y VP G + +S
Sbjct: 301 LNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHH 360
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
+ FP P + PER + D A + FG G CI ++ A ++ ++
Sbjct: 361 DEEAFPNPRLWDPERDEKVDGA--------FIGFGAGVHKCIGQKFALLQVKTILATAFR 412
Query: 453 VTQNQVSCRLSQYFPSPD 470
Q+ L P PD
Sbjct: 413 EYDFQL---LRDEVPDPD 427
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 13/198 (6%)
Query: 275 YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQ--QRLFSAVKHLKRG 332
Y ++S ++ GM V + AG TS TT + + H+ + + +L +
Sbjct: 247 YRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ 306
Query: 333 SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
D +A+ ++E+ R P + V R++ E + Y VP G + +S
Sbjct: 307 LNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHH 366
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
+ FP P + PER + D A + FG G CI ++ A ++ ++
Sbjct: 367 DEEAFPNPRLWDPERDEKVDGA--------FIGFGAGVHKCIGQKFALLQVKTILATAFR 418
Query: 453 VTQNQVSCRLSQYFPSPD 470
Q+ L P PD
Sbjct: 419 EYDFQL---LRDEVPDPD 433
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 13/198 (6%)
Query: 275 YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQ--QRLFSAVKHLKRG 332
Y ++S ++ GM V + AG TS TT + + H+ + + +L +
Sbjct: 256 YRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ 315
Query: 333 SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
D +A+ ++E+ R P + V R++ E + Y VP G + +S
Sbjct: 316 LNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHH 375
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
+ FP P + PER + D A + FG G CI ++ A ++ ++
Sbjct: 376 DEEAFPNPRLWDPERDEKVDGA--------FIGFGAGVHKCIGQKFALLQVKTILATAFR 427
Query: 453 VTQNQVSCRLSQYFPSPD 470
Q+ L P PD
Sbjct: 428 EYDFQL---LRDEVPDPD 442
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 11/187 (5%)
Query: 272 LENYLANPKLSRRD--IVGMSVDILLAGIDTSAYTTCF----LLYHISRSASAQQRLFSA 325
+E NP+ S D + + D+ AG+ T++ T + ++ H QQ +
Sbjct: 257 MEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDV 316
Query: 326 VKHLKRGSVTSADYDGCAYAKAVLKETFRLSPI-SVGVGRILNKETVLSGYHVPAGTLAV 384
+ ++R + D Y AV+ E R I +GV + +++ + G+ +P GT +
Sbjct: 317 IGQVRRPEM--GDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLI 374
Query: 385 TQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQ 444
T + + P +F PE +L D V P LPF G R C+ A L
Sbjct: 375 TNLSSVLKDEAVWEKPFRFHPEHFL--DAQGHFVKPEAFLPFSAGRRACLGEPLARMELF 432
Query: 445 VLIMKTL 451
+ L
Sbjct: 433 LFFTSLL 439
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 4/167 (2%)
Query: 269 TSLLENYLANPK-LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVK 327
T+LLE N + ++I V IL G +T A T +LL ++ R+ V+
Sbjct: 246 TALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVE 305
Query: 328 HLKRG-SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQ 386
+ G V D + V+ E RL P + R E+ L GY +PAG +
Sbjct: 306 AVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYS 365
Query: 387 NQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTC 433
R + + +F P+RWL E A V Y + PF G R C
Sbjct: 366 PYAIQRDPKSYDDNLEFDPDRWLPERAAN--VPKYAMKPFSAGKRKC 410
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 11/187 (5%)
Query: 272 LENYLANPKLSRRD--IVGMSVDILLAGIDTSAYTTCF----LLYHISRSASAQQRLFSA 325
+E NP+ S D + + D+ AG+ T++ T + ++ H QQ +
Sbjct: 257 MEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDV 316
Query: 326 VKHLKRGSVTSADYDGCAYAKAVLKETFRLSPI-SVGVGRILNKETVLSGYHVPAGTLAV 384
+ ++R + D Y AV+ E R I +G+ + +++ + G+ +P GT +
Sbjct: 317 IGQVRRPEM--GDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLI 374
Query: 385 TQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQ 444
T + + P +F PE +L D V P LPF G R C+ A L
Sbjct: 375 TNLSSVLKDEAVWEKPFRFHPEHFL--DAQGHFVKPEAFLPFSAGRRACLGEPLARMELF 432
Query: 445 VLIMKTL 451
+ L
Sbjct: 433 LFFTSLL 439
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 137/339 (40%), Gaps = 40/339 (11%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPELSR 174
T+ K WC+ + L FS+ H +D+ Q++ ++ L + + +++R
Sbjct: 92 THEKNWCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPE---DMTR 148
Query: 175 LYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--DT 232
L L+ + L F R +SF D + S V D ++ D
Sbjct: 149 LTLDTIGLSGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPDD 196
Query: 233 PLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LSR 283
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 197 PAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDD 252
Query: 284 RDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDGC 342
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 253 ENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQL 312
Query: 343 AYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPGP 400
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 313 KYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 372
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 373 EEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 407
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
Query: 281 LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYD 340
S+ +++ ++++AG +T+ + + ++ + Q ++ + + + + D
Sbjct: 269 FSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDD 328
Query: 341 GCA--YAKAVLKETFRLSPI-SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQ-Y 396
C Y +AVL E R I +G+ +++ V+ GY +P GT +T N S + Y
Sbjct: 329 KCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVIT-NLYSVHFDEKY 387
Query: 397 FPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
+ P+ F PER+L D + ++PF G R C+ A + + L
Sbjct: 388 WRDPEVFHPERFL--DSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALL 440
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
Query: 281 LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYD 340
S+ +++ ++++AG +T+ + + ++ + Q ++ + + + + D
Sbjct: 269 FSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDD 328
Query: 341 GCA--YAKAVLKETFRLSPI-SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQ-Y 396
C Y +AVL E R I +G+ +++ V+ GY +P GT +T N S + Y
Sbjct: 329 KCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVIT-NLYSVHFDEKY 387
Query: 397 FPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
+ P+ F PER+L D + ++PF G R C+ A + + L
Sbjct: 388 WRDPEVFHPERFL--DSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALL 440
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 132/357 (36%), Gaps = 33/357 (9%)
Query: 114 GLLPTNGKEWCRIRS---ELQKGFSEIKHVRSHLDLVNQVMDEFIELRIGQRATFQDFLP 170
G++ +NGK W IR + F K RS D V + +E +A+ D
Sbjct: 93 GIISSNGKRWKEIRRFSLTTLRNFGMGK--RSIEDRVQEEAHCLVEELRKTKASPCDPTF 150
Query: 171 ELSRLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKT-DNGPQLWRK 229
L ++C V F+KR F E NS ++ +N P L
Sbjct: 151 ILGCAPCNVICSVVFQKR---FDYKDQNFLTLMKRFNENFRILNSPWIQVCNNFPLLIDC 207
Query: 230 F---DTPLYKKLKMAHGFIEEQALKFISQKSSRVASVQTNQATSLLENYL---------A 277
F + K + + +I E+ AS+ N ++ +L
Sbjct: 208 FPGTHNKVLKNVALTRSYIREKV-------KEHQASLDVNNPRDFIDCFLIKMEQEKDNQ 260
Query: 278 NPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHL--KRGSVT 335
+ + ++VG D+ +AG +T++ T + L + + ++ + H+ + S
Sbjct: 261 KSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPC 320
Query: 336 SADYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLS 394
D Y AV+ E R S + GV + +T Y +P GT +
Sbjct: 321 MQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDD 380
Query: 395 QYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
+ FP P+ F P +L ++ + S Y +PF G R C A L + + L
Sbjct: 381 KEFPNPNIFDPGHFLDKNGNFK-KSDYF-MPFSAGKRICAGEGLARMELFLFLTTIL 435
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 125/327 (38%), Gaps = 43/327 (13%)
Query: 147 VNQVMDEFIE---LRIGQRATFQDFLPELSRLYLEIMCLVAFEKR----LHSFTADXXXX 199
V+Q+ EF E ++ G T Q E S L I+C + F + +H+F D
Sbjct: 140 VDQLTQEFCERMRVQAGAPVTIQK---EFSLLTCSIICYLTFGNKEDTLVHAFH-DCVQD 195
Query: 200 XXXXXXXXEAAYTANSCVLKTDNGPQLWRKFDTPLYKKLKMAHGFIEEQALKFISQKSSR 259
L+ P LWR L + ++ +E+Q + K S
Sbjct: 196 LMKTWDHWSIQILDMVPFLRFFPNPGLWR-----LKQAIENRDHMVEKQLRR---HKESM 247
Query: 260 VASVQTNQATSLLENY-----LANPKLSRRDIVGMSV-DILLAGIDTSA----YTTCFLL 309
VA + +L+ P V MSV D+ + G +T+A + FLL
Sbjct: 248 VAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLL 307
Query: 310 YHISRSASAQQRLFSAVKHLKRGS----VTSADYDGCAYAKAVLKETFRLSPI-SVGVGR 364
+H Q+ L + L G+ VT D A + E RL P+ + +
Sbjct: 308 HHPEIQRRLQEEL---DRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPH 364
Query: 365 ILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVL 424
+ + + GY +P G + + Q + + P +F P+R+L +P + L
Sbjct: 365 RTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFL--EPGANPSA----L 418
Query: 425 PFGHGPRTCIARRSAEQNLQVLIMKTL 451
FG G R C+ A L V++ + L
Sbjct: 419 AFGCGARVCLGESLARLELFVVLARLL 445
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 275 YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHI--SRSASAQQRLFSAVKHLKRG 332
Y ++S+ ++ GM V + AG TS TT + L H+ R+ +L +
Sbjct: 242 YRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQ 301
Query: 333 SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
+ +A+ +E+ R P V + R + K + Y VP G + +S +
Sbjct: 302 LNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQ 361
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARR 437
+ FP P ++ PER ++ C FG G CI +
Sbjct: 362 DEEAFPNPREWNPERNMKLVDGAFC-------GFGAGVHKCIGEK 399
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 5/178 (2%)
Query: 277 ANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS 336
A+ + S +++ ++ + AG +T++ T + + + +R++ ++ +
Sbjct: 260 AHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPP 319
Query: 337 ADYDGCA--YAKAVLKETFRLSPI-SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRL 393
+D Y +AV+ E R S + +GV I+ + T GY +P T +
Sbjct: 320 ELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHD 379
Query: 394 SQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
YF PD F P+ +L + A + + +PF G R C+ A L + L
Sbjct: 380 PHYFEKPDAFNPDHFLDANGALKKTEAF--IPFSLGKRICLGEGIARAELFLFFTTIL 435
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 257 SSRVASVQTNQATSLLEN------YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLY 310
+ + A+V + +TS L + Y +S ++ GM V + AG TS+ TT + +
Sbjct: 232 ARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSML 291
Query: 311 HISRSASAQ--QRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNK 368
H+ A+ + + L ++ + D +A+ +E+ R P + + R +
Sbjct: 292 HLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMA 351
Query: 369 ETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGH 428
+ + Y VP G + +S + FP P ++ PER + + A + FG
Sbjct: 352 DVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGA--------FIGFGA 403
Query: 429 GPRTCIARRSAEQNLQVLIMKTLAVT 454
G CI Q +L +KT+ T
Sbjct: 404 GVHKCIG-----QKFGLLQVKTILAT 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 139/334 (41%), Gaps = 30/334 (8%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPELSR 174
T+ K W + + L FS+ H +D+ Q++ ++ L + + +++R
Sbjct: 97 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPE---DMTR 153
Query: 175 LYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKFDTPL 234
L L+ + L F R +SF D A A + + +T+ + +
Sbjct: 154 LTLDTIGLCGFNYRFNSFYRDQPHPFITSMV--RALDEAMNKLQRTNPDDPAYDENKRQF 211
Query: 235 YKKLKMAHGFIEEQALKFISQKSSRVASVQTNQATSLLENYL--ANPK----LSRRDIVG 288
+ +K+ + ++ K I+ R AS + Q+ LL + L +P+ L +I
Sbjct: 212 QEDIKVMNDLVD----KIIA---DRKASGE--QSDDLLTHMLHGKDPETGEPLDDENIRY 262
Query: 289 MSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDGCAYAKA 347
V L+AG +T++ F LY + ++ Q+ + V S Y
Sbjct: 263 QIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGM 322
Query: 348 VLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPGPDQFIP 405
VL E RL P + ++TVL G Y + G + V Q+ + + ++F P
Sbjct: 323 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRP 382
Query: 406 ERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
ER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 383 ERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 412
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Query: 275 YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQ--QRLFSAVKHLKRG 332
Y +S ++ GM V + AG TS+ TT + + H+ A+ + + L ++
Sbjct: 243 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ 302
Query: 333 SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
+ D +A+ +E+ R P + + R + + + Y VP G + +S
Sbjct: 303 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 362
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
+ FP P ++ PER + + A + FG G CI Q +L +KT+
Sbjct: 363 DEEAFPEPRRWDPERDEKVEGA--------FIGFGAGVHKCIG-----QKFGLLQVKTIL 409
Query: 453 VT 454
T
Sbjct: 410 AT 411
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 94 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 149
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 197
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 198 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 253
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 254 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 313
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P S ++TVL G Y + G L V Q+ + +
Sbjct: 314 LKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 373
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 374 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 409
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Query: 275 YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQ--QRLFSAVKHLKRG 332
Y +S ++ GM V + AG TS+ TT + + H+ A+ + + L ++
Sbjct: 244 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ 303
Query: 333 SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
+ D +A+ +E+ R P + + R + + + Y VP G + +S
Sbjct: 304 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 363
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
+ FP P ++ PER + + A + FG G CI Q +L +KT+
Sbjct: 364 DEEAFPEPRRWDPERDEKVEGA--------FIGFGAGVHKCIG-----QKFGLLQVKTIL 410
Query: 453 VT 454
T
Sbjct: 411 AT 412
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 273 ENYLANPKLS---RRDIVGMSVDILLAGIDT--SAYTTCFLLYHISRSASAQQRLFSAVK 327
E + +P LS R + +V +L+AG +T SA T FLL +S Q+R+ +
Sbjct: 195 EALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLL--LSHRPDWQKRVAES-- 250
Query: 328 HLKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQN 387
A A +E RL P + + R L + +L +P GT V
Sbjct: 251 --------------EEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSP 296
Query: 388 QVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIAR 436
V+ RL YFP + F PER+L A++ PFG G R C+ R
Sbjct: 297 YVTQRL--YFPEGEAFQPERFL----AERGTPSGRYFPFGLGQRLCLGR 339
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 450 TLAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPFGHGPRTCIAR 505
T V V+ RL YFP + F PER+L A++ PFG G R C+ R
Sbjct: 290 TTLVLSPYVTQRL--YFPEGEAFQPERFL----AERGTPSGRYFPFGLGQRLCLGR 339
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Query: 275 YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQ--QRLFSAVKHLKRG 332
Y +S ++ GM V + AG TS+ TT + + H+ A+ + + L ++
Sbjct: 256 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ 315
Query: 333 SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
+ D +A+ +E+ R P + + R + + + Y VP G + +S
Sbjct: 316 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 375
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
+ FP P ++ PER + + A + FG G CI Q +L +KT+
Sbjct: 376 DEEAFPEPRRWDPERDEKVEGA--------FIGFGAGVHKCIG-----QKFGLLQVKTIL 422
Query: 453 VT 454
T
Sbjct: 423 AT 424
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Query: 275 YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQ--QRLFSAVKHLKRG 332
Y +S ++ GM V + AG TS+ TT + + H+ A+ + + L ++
Sbjct: 243 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ 302
Query: 333 SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
+ D +A+ +E+ R P + + R + + + Y VP G + +S
Sbjct: 303 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 362
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
+ FP P ++ PER + + A + FG G CI Q +L +KT+
Sbjct: 363 DEEAFPEPRRWDPERDEKVEGA--------FIGFGAGVHKCIG-----QKFGLLQVKTIL 409
Query: 453 VT 454
T
Sbjct: 410 AT 411
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 12/113 (10%)
Query: 340 DGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPG 399
DG A V++E R + ++ V R+ + ++G +P+GT V + R F
Sbjct: 282 DGSADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDD 341
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
PD F+P R P + FGHG C+ A L V +++ LA
Sbjct: 342 PDTFLPGR-----------KPNRHITFGHGMHHCLGSALARIELSV-VLRVLA 382
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Query: 275 YLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQ--QRLFSAVKHLKRG 332
Y +S ++ GM V + AG TS+ TT + + H+ A+ + + L ++
Sbjct: 242 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ 301
Query: 333 SVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
+ D +A+ +E+ R P + + R + + + Y VP G + +S
Sbjct: 302 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 361
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
+ FP P ++ PER + + A + FG G CI Q +L +KT+
Sbjct: 362 DEEAFPEPRRWDPERDEKVEGA--------FIGFGAGVHKCIG-----QKFGLLQVKTIL 408
Query: 453 VT 454
T
Sbjct: 409 AT 410
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGKQFA 406
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 42/349 (12%)
Query: 110 YSTGGLLP--TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRAT 164
++ GLL T+ K W + + L FS+ H +D+ Q++ ++ L +
Sbjct: 81 FAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE 140
Query: 165 FQDFLPELSRLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGP 224
+ +++RL L+ + L F R +SF D + S V D
Sbjct: 141 VPE---DMTRLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAM 185
Query: 225 QLWRKF--DTPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--A 277
++ D P Y + K ++ +K ++ ++ + Q+ LL + L
Sbjct: 186 NKLQRANPDDPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGK 241
Query: 278 NPK----LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGS 333
+P+ L +I + L+AG ++++ F LY + ++ Q+ +
Sbjct: 242 DPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP 301
Query: 334 VTS-ADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVS 390
V S Y VL E RL P + ++TVL G Y + G L V Q+
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLH 361
Query: 391 CRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
+ + ++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 362 RDKTIWGDDVEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 42/349 (12%)
Query: 110 YSTGGLLP--TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRAT 164
++ GLL T+ K W + + L FS+ H +D+ Q++ ++ L +
Sbjct: 81 FAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE 140
Query: 165 FQDFLPELSRLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGP 224
+ +++RL L+ + L F R +SF D + S V D
Sbjct: 141 VPE---DMTRLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAM 185
Query: 225 QLWRKF--DTPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--A 277
++ D P Y + K ++ +K ++ ++ + Q+ LL + L
Sbjct: 186 NKLQRANPDDPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGK 241
Query: 278 NPK----LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGS 333
+P+ L +I + L+AG ++++ F LY + ++ Q+ +
Sbjct: 242 DPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP 301
Query: 334 VTS-ADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVS 390
V S Y VL E RL P + ++TVL G Y + G L V Q+
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLH 361
Query: 391 CRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
+ + ++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 362 RDKTIWGDDVEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 42/349 (12%)
Query: 110 YSTGGLLP--TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRAT 164
++ GLL T+ K W + + L FS+ H +D+ Q++ ++ L +
Sbjct: 82 FAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE 141
Query: 165 FQDFLPELSRLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGP 224
+ +++RL L+ + L F R +SF D + S V D
Sbjct: 142 VPE---DMTRLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAM 186
Query: 225 QLWRKF--DTPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--A 277
++ D P Y + K ++ +K ++ ++ + Q+ LL + L
Sbjct: 187 NKLQRANPDDPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGK 242
Query: 278 NPK----LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGS 333
+P+ L +I + L+AG ++++ F LY + ++ Q+ +
Sbjct: 243 DPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP 302
Query: 334 VTS-ADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVS 390
V S Y VL E RL P + ++TVL G Y + G L V Q+
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLH 362
Query: 391 CRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
+ + ++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 363 RDKTIWGDDVEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 407
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 92 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 147
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 195
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 196 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 251
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 252 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 311
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 312 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 371
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 372 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 407
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 94 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 149
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 197
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 198 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 253
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 254 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 313
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 314 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 373
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 374 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 409
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 35/249 (14%)
Query: 211 YTANSCVLKTDNGPQLWRKFDTPLYKKLKMAHGFIEEQALK-FISQK-SSRVASVQTNQA 268
Y S V+K GPQ F E Q L+ FI++K ++ N
Sbjct: 198 YEMFSSVMKHLPGPQ---------------QQAFKELQGLEDFIAKKVEHNQRTLDPNSP 242
Query: 269 TSLLENYL---------ANPKLSRRDIVGMSVDILLAGIDTSA----YTTCFLLYHISRS 315
++++L N + +++V ++++ AG +T + Y L+ H
Sbjct: 243 RDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVE 302
Query: 316 ASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSG 374
A + + + K D Y +AV+ E R + +G+ +NK+T
Sbjct: 303 AKVHEEIDRVIG--KNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRD 360
Query: 375 YHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCI 434
+ +P GT R ++F P F P+ +L D Q +PF G R C
Sbjct: 361 FFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFL--DKKGQFKKSDAFVPFSIGKRYCF 418
Query: 435 ARRSAEQNL 443
A L
Sbjct: 419 GEGLARMEL 427
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 9/171 (5%)
Query: 278 NPKLSRRDIVGMSVDILLAGIDTSA----YTTCFLLYHISRSASAQQRLFSAVKHLKRGS 333
N + +++V ++++ AG +T + Y L+ H A + + + K
Sbjct: 261 NTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIG--KNRQ 318
Query: 334 VTSADYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
D Y +AV+ E R I +G+ R + K+T + +P GT R
Sbjct: 319 PKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLR 378
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNL 443
+F P F P+ +L E Q +PF G R C A L
Sbjct: 379 DPSFFSNPQDFNPQHFLNE--KGQFKKSDAFVPFSIGKRNCFGEGLARMEL 427
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 29/169 (17%)
Query: 273 ENYLANPKLS---RRDIVGMSVDILLAGIDT--SAYTTCFLLYHISRSASAQQRLFSAVK 327
E + +P LS R + +V +L+AG +T SA T FLL +S Q+R+ +
Sbjct: 195 EALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLL--LSHRPDWQKRVAES-- 250
Query: 328 HLKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQN 387
A A +E RL P + + R L + +L +P GT V
Sbjct: 251 --------------EEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSP 296
Query: 388 QVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIAR 436
V+ RL +FP + F PER+L E + PFG G R C+ R
Sbjct: 297 YVTQRL--HFPDGEAFRPERFLEE----RGTPSGRYFPFGLGQRLCLGR 339
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 136/339 (40%), Gaps = 40/339 (11%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPELSR 174
T+ K W + + L FS+ H +D+ Q++ ++ L + + +++R
Sbjct: 92 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPE---DMTR 148
Query: 175 LYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--DT 232
L L+ + L F R +SF D + S V D ++ D
Sbjct: 149 LTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPDD 196
Query: 233 PLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LSR 283
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 197 PAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDD 252
Query: 284 RDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDGC 342
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 253 ENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQL 312
Query: 343 AYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPGP 400
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 313 KYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 372
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 373 EEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 407
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + P+G+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPYGNGQRACIGQQFA 406
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 40/339 (11%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPELSR 174
T+ K W + + L FS+ H +D+ Q++ ++ L + + +++R
Sbjct: 92 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPE---DMTR 148
Query: 175 LYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--DT 232
L L+ + L F R +SF D + S V D R+ D
Sbjct: 149 LTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLRRANPDD 196
Query: 233 PLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LSR 283
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 197 PAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDD 252
Query: 284 RDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDGC 342
+I + L AG + ++ F LY + ++ Q+ + V S
Sbjct: 253 ENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSHKQVKQL 312
Query: 343 AYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPGP 400
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 313 KYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDV 372
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 373 EEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 407
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 94 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 149
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 197
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 198 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 253
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 254 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 313
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P ++TVL G Y + G L V Q+ + +
Sbjct: 314 LKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 373
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 374 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 409
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 40/339 (11%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPELSR 174
T+ K W + + L FS+ H +D+ Q++ ++ L + + +++R
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPE---DMTR 147
Query: 175 LYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--DT 232
L L+ + L F R +SF D + S V D R+ D
Sbjct: 148 LTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLRRANPDD 195
Query: 233 PLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LSR 283
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 196 PAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDD 251
Query: 284 RDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDGC 342
+I + L AG + ++ F LY + ++ Q+ + V S
Sbjct: 252 ENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSYKQVKQL 311
Query: 343 AYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPGP 400
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 312 KYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 372 EEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 291 VDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDGCAYAKAVL 349
+ L+AG +T++ F LY + ++ Q++ + V S Y VL
Sbjct: 259 ITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKYVGMVL 318
Query: 350 KETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPGPDQFIPER 407
E RL P + ++TVL G Y + G + V Q+ + + ++F PER
Sbjct: 319 NEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 408 WLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
+ E+P+ + + PFG+G R CI ++ A
Sbjct: 379 F--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 3/178 (1%)
Query: 273 ENYLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHL--K 330
+++ +L ++ DI A DT + +LL +R Q R+ + + + +
Sbjct: 267 DSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 326
Query: 331 RGSVTSADYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAGTLAVTQNQV 389
D Y A L E R S + V + T + GYH+P T+
Sbjct: 327 DRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWS 386
Query: 390 SCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLI 447
+P P+ F P R+L +D V+ F G R CI ++ L + I
Sbjct: 387 VNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFI 444
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG + ++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+ G +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG + ++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+ G +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+ G +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG + ++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+ G +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG + ++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 137/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + P+G+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPWGNGQRACIGQQFA 406
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 135/339 (39%), Gaps = 40/339 (11%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPELSR 174
T+ K W + + L FS+ H +D+ Q++ ++ L + + +++R
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPE---DMTR 147
Query: 175 LYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--DT 232
L L+ + L F R +SF D + S V D ++ D
Sbjct: 148 LTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 233 PLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LSR 283
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 196 PAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDD 251
Query: 284 RDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDGC 342
+I + L+ G +T++ F LY + ++ Q+ + V S
Sbjct: 252 ENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQL 311
Query: 343 AYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPGP 400
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 312 KYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 372 EEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPE-LS 173
T+ K W + + L FS+ H +D+ Q++ ++ L + +PE ++
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE----VPEDMT 146
Query: 174 RLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--D 231
RL L+ + L F R +SF D + S V D ++ D
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPD 194
Query: 232 TPLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LS 282
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 195 DPAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 250
Query: 283 RRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDG 341
+I + L+ G +T++ F LY + ++ Q+ + V S
Sbjct: 251 DENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ 310
Query: 342 CAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPG 399
Y VL E RL P + ++TVL G Y + G L V Q+ + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 400 PDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 371 VEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 281 LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYD 340
LS +DI+ + +++LLA + + T ++YH+ + + + + R
Sbjct: 254 LSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLVPRA-------- 305
Query: 341 GCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGP 400
+ ET R P + R L+++TV+ G + T+ + R + F P
Sbjct: 306 --------IAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQP 357
Query: 401 DQFIPERWLREDPAKQCVSPYLV--LPFGHGPRTCIARRSAEQNLQVLIMKTLAVTQNQV 458
D F RED + L FG G C+ A+ ++++ L +N
Sbjct: 358 DVF---NIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRN-- 412
Query: 459 SCRLSQYF 466
RL + F
Sbjct: 413 -IRLEEDF 419
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 124/347 (35%), Gaps = 29/347 (8%)
Query: 114 GLLPTNGKEWCRIRS---ELQKGFSEIKHVRSHLDLVNQVMDEFIELRIGQRATFQDFLP 170
G++ +NGK W IR + F K RS D V + +E +A+ D
Sbjct: 94 GIVFSNGKRWKEIRRFSLMTLRNFGMGK--RSIEDRVQEEARCLVEELRKTKASPCDPTF 151
Query: 171 ELSRLYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF 230
L ++C + F+KR D + + +N P + F
Sbjct: 152 ILGCAPCNVICSIIFQKRFDY--KDQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYF 209
Query: 231 DTPLYKKLKMAHGFIEEQALKFISQKSSRVASVQTNQATSLLENYLAN---------PKL 281
+ KL F+E L+ + + S+ N ++ +L +
Sbjct: 210 PG-THNKLLKNLAFMESDILEKVKEHQE---SMDINNPRDFIDCFLIKMEKEKQNQQSEF 265
Query: 282 SRRDIVGMSVDILLAGIDTSA----YTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSA 337
+ ++V + D+L AG +T++ Y LL H +A Q+ + V + S
Sbjct: 266 TIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVG--RNRSPCMQ 323
Query: 338 DYDGCAYAKAVLKETFR-LSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQY 396
D Y AV+ E R + I + + + Y +P GT +T ++
Sbjct: 324 DRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKE 383
Query: 397 FPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNL 443
FP P+ F P +L D +PF G R C+ A L
Sbjct: 384 FPNPEMFDPRHFL--DEGGNFKKSNYFMPFSAGKRICVGEGLARMEL 428
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 7/162 (4%)
Query: 281 LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADY 339
L +I + L+AG +T++ F LY + ++ Q+ + V S
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV 309
Query: 340 DGCAYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYF 397
Y VL E R+ P + ++T+L G Y + G L V Q+ + +
Sbjct: 310 KQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWG 369
Query: 398 PGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 370 DDVEEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 407
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 40/339 (11%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPELSR 174
T+ K W + + L FS+ H +D+ Q++ ++ L + + +++R
Sbjct: 92 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPE---DMTR 148
Query: 175 LYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--DT 232
L L+ + L F R +SF D + S V D ++ D
Sbjct: 149 LTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPDD 196
Query: 233 PLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LSR 283
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 197 PAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDD 252
Query: 284 RDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDGC 342
+I + L AG + ++ F LY + ++ Q+ + V S
Sbjct: 253 ENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQL 312
Query: 343 AYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPGP 400
Y VL E RL P ++TVL G Y + G L V Q+ + +
Sbjct: 313 KYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 372
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 373 EEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 407
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 40/339 (11%)
Query: 118 TNGKEWCRIRSELQKGFSEIKHVRSH---LDLVNQVMDEFIELRIGQRATFQDFLPELSR 174
T+ K W + + L FS+ H +D+ Q++ ++ L + + +++R
Sbjct: 91 THEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPE---DMTR 147
Query: 175 LYLEIMCLVAFEKRLHSFTADXXXXXXXXXXXXEAAYTANSCVLKTDNGPQLWRKF--DT 232
L L+ + L F R +SF D + S V D ++ D
Sbjct: 148 LTLDTIGLCGFNYRFNSFYRD------------QPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 233 PLYKKLKMAHGFIEEQALKFISQKSSRVAS---VQTNQATSLLENYL--ANPK----LSR 283
P Y + K ++ +K ++ ++ + Q+ LL + L +P+ L
Sbjct: 196 PAYDENKRQF----QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDD 251
Query: 284 RDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTS-ADYDGC 342
+I + L AG + ++ F LY + ++ Q+ + V S
Sbjct: 252 ENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQL 311
Query: 343 AYAKAVLKETFRLSPISVGVGRILNKETVLSG-YHVPAGT-LAVTQNQVSCRLSQYFPGP 400
Y VL E RL P ++TVL G Y + G L V Q+ + +
Sbjct: 312 KYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
++F PER+ E+P+ + + PFG+G R CI ++ A
Sbjct: 372 EEFRPERF--ENPS--AIPQHAFKPFGNGQRACIGQQFA 406
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 91/244 (37%), Gaps = 25/244 (10%)
Query: 211 YTANSCVLKTDNGPQ-----LWRKFDTPLYKKLKMAHGFIEEQALK-FISQKSSRVASVQ 264
Y S V+K GPQ L + + + KK++ ++ + + FI R+ +
Sbjct: 198 YEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEE 257
Query: 265 TNQATSLLENYLANPKLSRRDIVGMSVDILLAGIDTSA----YTTCFLLYHISRSASAQQ 320
N T E YL N +V ++++ + G +T + Y L+ H A +
Sbjct: 258 KNPNT---EFYLKN-------LVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHE 307
Query: 321 RLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPA 379
+ + K D Y +AV+ E R I + + R + K+T + +P
Sbjct: 308 EIDRVIG--KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPK 365
Query: 380 GTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
GT R +F P F P+ +L E Q +PF G R C A
Sbjct: 366 GTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE--KGQFKKSDAFVPFSIGKRNCFGEGLA 423
Query: 440 EQNL 443
L
Sbjct: 424 RMEL 427
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 5/175 (2%)
Query: 280 KLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSA-- 337
+ ++++ + + AG +T++ T + + + +R+ ++ + A
Sbjct: 263 EFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALD 322
Query: 338 DYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQY 396
D Y AV+ E RL I GV + K+T GY +P T + +Y
Sbjct: 323 DRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRY 382
Query: 397 FPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
F P+ F P +L + A + + +PF G R C+ A L + L
Sbjct: 383 FETPNTFNPGHFLDANGALKRNEGF--MPFSLGKRICLGEGIARTELFLFFTTIL 435
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 5/175 (2%)
Query: 280 KLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSA-- 337
+ ++++ + + AG +T++ T + + + +R+ ++ + A
Sbjct: 263 EFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALD 322
Query: 338 DYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQY 396
D Y AV+ E RL I GV + K+T GY +P T + +Y
Sbjct: 323 DRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRY 382
Query: 397 FPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
F P+ F P +L + A + + +PF G R C+ A L + L
Sbjct: 383 FETPNTFNPGHFLDANGALKRNEGF--MPFSLGKRICLGEGIARTELFLFFTTIL 435
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 28/179 (15%)
Query: 270 SLLENYLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHL 329
+L+ + LAN ++ R +++ ++ +L+AG +T+A T + + + H
Sbjct: 218 ALVADQLANGEIDREELISTAMLLLIAGHETTASMTSL-------------SVITLLDHP 264
Query: 330 KRGSVTSADYDGCAYAKAVLKETFR-LSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQ 388
++ + AD + ++E R L+ + GR+ + + G + AG + N
Sbjct: 265 EQYAALRADR---SLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNS 321
Query: 389 VSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLI 447
++ R + PD R R L FG G C+ + A L+V++
Sbjct: 322 IANRDGTVYEDPDALDIHRSARHH-----------LAFGFGVHQCLGQNLARLELEVIL 369
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 28/179 (15%)
Query: 270 SLLENYLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHL 329
+L+ + LAN ++ R +++ ++ +L+AG +T+A T + + + H
Sbjct: 218 ALVADQLANGEIDREELISTAMLLLIAGHETTASMTSL-------------SVITLLDHP 264
Query: 330 KRGSVTSADYDGCAYAKAVLKETFR-LSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQ 388
++ + AD + ++E R L+ + GR+ + + G + AG + N
Sbjct: 265 EQYAALRADR---SLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNS 321
Query: 389 VSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLI 447
++ R + PD R R L FG G C+ + A L+V++
Sbjct: 322 IANRDGTVYEDPDALDIHRSARHH-----------LAFGFGVHQCLGQNLARLELEVIL 369
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 28/179 (15%)
Query: 270 SLLENYLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHL 329
+L+ + LAN ++ R +++ ++ +L+AG +T+A T + + + H
Sbjct: 218 ALVADQLANGEIDREELISTAMLLLIAGHETTASMTSL-------------SVITLLDHP 264
Query: 330 KRGSVTSADYDGCAYAKAVLKETFR-LSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQ 388
++ + AD + ++E R L+ + GR+ + + G + AG + N
Sbjct: 265 EQYAALRADR---SLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNS 321
Query: 389 VSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLI 447
++ R + PD R R L FG G C+ + A L+V++
Sbjct: 322 IANRDGTVYEDPDALDIHRSARHH-----------LAFGFGVHQCLGQNLARLELEVIL 369
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 28/179 (15%)
Query: 270 SLLENYLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHL 329
+L+ + LAN ++ R +++ ++ +L+AG +T+A T + + + H
Sbjct: 218 ALVADQLANGEIDREELISTAMLLLIAGHETTASMTSL-------------SVITLLDHP 264
Query: 330 KRGSVTSADYDGCAYAKAVLKETFR-LSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQ 388
++ + AD + ++E R L+ + GR+ + + G + AG + N
Sbjct: 265 EQYAALRADR---SLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNS 321
Query: 389 VSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLI 447
++ R + PD R R L FG G C+ + A L+V++
Sbjct: 322 IANRDGTVYEDPDALDIHRSARHH-----------LAFGFGVHQCLGQNLARLELEVIL 369
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 5/171 (2%)
Query: 284 RDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSA--DYDG 341
++++ + + AG +T++ T + + + +R+ ++ + A D
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 342 CAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGP 400
Y AV+ E RL I GV + K+T GY +P T + +YF P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
+ F P +L + A + + +PF G R C+ A L + L
Sbjct: 387 NTFNPGHFLDANGALKRNEGF--MPFSLGKRICLGEGIARTELFLFFTTIL 435
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 90/244 (36%), Gaps = 25/244 (10%)
Query: 211 YTANSCVLKTDNGPQ-----LWRKFDTPLYKKLKMAHGFIEEQALK-FISQKSSRVASVQ 264
Y S V+K GPQ L + + + KK++ ++ + + FI R+ +
Sbjct: 198 YEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEE 257
Query: 265 TNQATSLLENYLANPKLSRRDIVGMSVDILLAGIDTSA----YTTCFLLYHISRSASAQQ 320
N T E YL N +V ++ + + G +T + Y L+ H A +
Sbjct: 258 KNPNT---EFYLKN-------LVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHE 307
Query: 321 RLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPA 379
+ + K D Y +AV+ E R I + + R + K+T + +P
Sbjct: 308 EIDRVIG--KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPK 365
Query: 380 GTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
GT R +F P F P+ +L E Q +PF G R C A
Sbjct: 366 GTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE--KGQFKKSDAFVPFSIGKRNCFGEGLA 423
Query: 440 EQNL 443
L
Sbjct: 424 RMEL 427
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 9/171 (5%)
Query: 278 NPKLSRRDIVGMSVDILLAGIDTSA----YTTCFLLYHISRSASAQQRLFSAVKHLKRGS 333
N + +++V ++ + + G +T + Y L+ H A + + + K
Sbjct: 261 NTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIG--KNRQ 318
Query: 334 VTSADYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
D Y +AV+ E R I + + R + K+T + +P GT R
Sbjct: 319 PKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLR 378
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNL 443
+F P F P+ +L E Q +PF G R C A L
Sbjct: 379 DPSFFSNPQDFNPQHFLNE--KGQFKKSDAFVPFSIGKRNCFGEGLARMEL 427
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 90/244 (36%), Gaps = 25/244 (10%)
Query: 211 YTANSCVLKTDNGPQ-----LWRKFDTPLYKKLKMAHGFIEEQALK-FISQKSSRVASVQ 264
Y S V+K GPQ L + + + KK++ ++ + + FI R+ +
Sbjct: 198 YEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEE 257
Query: 265 TNQATSLLENYLANPKLSRRDIVGMSVDILLAGIDTSA----YTTCFLLYHISRSASAQQ 320
N T E YL N +V ++ + + G +T + Y L+ H A +
Sbjct: 258 KNPNT---EFYLKN-------LVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHE 307
Query: 321 RLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPA 379
+ + K D Y +AV+ E R I + + R + K+T + +P
Sbjct: 308 EIDRVIG--KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPK 365
Query: 380 GTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSA 439
GT R +F P F P+ +L E Q +PF G R C A
Sbjct: 366 GTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE--KGQFKKSDAFVPFSIGKRNCFGEGLA 423
Query: 440 EQNL 443
L
Sbjct: 424 RMEL 427
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Query: 344 YAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQ 402
Y AV+ E RL I GV + K+T GY +P T + +YF P+
Sbjct: 329 YTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNT 388
Query: 403 FIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
F P +L + A + + +PF G R C+ A L + L
Sbjct: 389 FNPGHFLDANGALKRNEGF--MPFSLGKRICLGEGIARTELFLFFTTIL 435
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 32/205 (15%)
Query: 251 KFISQKSSRVASVQTNQATSLLENYLAN----PKLSRRDIVGMSVDILLAGIDTSAYTTC 306
+ ++ + +A +TN ++ + + LS D++G +LL GID +A
Sbjct: 182 ELVAHARTLIAERRTNPGNDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGIDNTARFLS 241
Query: 307 FLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVGRIL 366
+ + ++ ++RL + + + + G A VGR++
Sbjct: 242 SVFWRLAWDIELRRRLIAHPELIPNAVDELLRFYGPAM-----------------VGRLV 284
Query: 367 NKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPF 426
+E + + G A+ ++ R F PD + ER +P L
Sbjct: 285 TQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER-----------TPNRHLSL 333
Query: 427 GHGPRTCIARRSAEQNLQVLIMKTL 451
GHG C+ +V I + L
Sbjct: 334 GHGIHRCLGAHLIRVEARVAITEFL 358
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 32/205 (15%)
Query: 251 KFISQKSSRVASVQTNQATSLLENYLAN----PKLSRRDIVGMSVDILLAGIDTSAYTTC 306
+ ++ + +A +TN ++ + + LS D++G +LL GID +A
Sbjct: 183 ELVAHARTLIAERRTNPGNDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGIDNTARFLS 242
Query: 307 FLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVGRIL 366
+ + ++ ++RL + + + + G A VGR++
Sbjct: 243 SVFWRLAWDIELRRRLIAHPELIPNAVDELLRFYGPAM-----------------VGRLV 285
Query: 367 NKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPF 426
+E + + G A+ ++ R F PD + ER +P L
Sbjct: 286 TQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER-----------TPNRHLSL 334
Query: 427 GHGPRTCIARRSAEQNLQVLIMKTL 451
GHG C+ +V I + L
Sbjct: 335 GHGIHRCLGAHLIRVEARVAITEFL 359
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 32/205 (15%)
Query: 251 KFISQKSSRVASVQTNQATSLLENYLAN----PKLSRRDIVGMSVDILLAGIDTSAYTTC 306
+ ++ + +A +TN ++ + + LS D++G +LL GID +A
Sbjct: 182 ELVAHARTLIAERRTNPGNDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGIDATARFLS 241
Query: 307 FLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVGRIL 366
+ + ++ ++RL + + + + G A VGR++
Sbjct: 242 SVFWRLAWDIELRRRLIAHPELIPNAVDELLRFYGPAM-----------------VGRLV 284
Query: 367 NKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPF 426
+E + + G A+ ++ R F PD + ER +P L
Sbjct: 285 TQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER-----------TPNRHLSL 333
Query: 427 GHGPRTCIARRSAEQNLQVLIMKTL 451
GHG C+ +V I + L
Sbjct: 334 GHGIHRCLGAHLIRVEARVAITEFL 358
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 5/175 (2%)
Query: 280 KLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSA-- 337
+ ++++ + + AG +T++ T + + + +R+ ++ + A
Sbjct: 263 EFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALD 322
Query: 338 DYDGCAYAKAVLKETFRLSP-ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQY 396
D Y AV+ E RL I GV + K+T GY +P T + +Y
Sbjct: 323 DRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRY 382
Query: 397 FPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
F P+ F P +L + A + + +PF G R C A L + L
Sbjct: 383 FETPNTFNPGHFLDANGALKRNEGF--MPFSLGKRICAGEGIARTELFLFFTTIL 435
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 9/179 (5%)
Query: 278 NPKLSRRDIVGMSVDILLAGIDTSA----YTTCFLLYHISRSASAQQRLFSAVKHLKRGS 333
N + + +V D+ AG +T++ Y+ LL H +A Q+ + + + S
Sbjct: 258 NLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIG--RHRS 315
Query: 334 VTSADYDGCAYAKAVLKETFR-LSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCR 392
D Y AV+ E R + + + + ++ Y +P GT +T
Sbjct: 316 PCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLH 375
Query: 393 LSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
+ FP P F P +L E S Y +PF G R C+ A L + + L
Sbjct: 376 DEKAFPNPKVFDPGHFLDES-GNFKKSDYF-MPFSAGKRMCVGEGLARMELFLFLTSIL 432
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 9/167 (5%)
Query: 290 SVDILLAGIDTSA----YTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYA 345
+VD+ AG +T++ Y LL H +A Q+ + + + S D Y
Sbjct: 272 AVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG--RNRSPCMQDRSHMPYT 329
Query: 346 KAVLKETFR-LSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFI 404
AV+ E R + + + + + Y +P GT + ++ FP P+ F
Sbjct: 330 DAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFD 389
Query: 405 PERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
P +L D +PF G R C+ A L + + L
Sbjct: 390 PHHFL--DEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSIL 434
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 9/167 (5%)
Query: 290 SVDILLAGIDTSA----YTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYA 345
+VD+ AG +T++ Y LL H +A Q+ + + + S D Y
Sbjct: 274 AVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG--RNRSPCMQDRSHMPYT 331
Query: 346 KAVLKETFR-LSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFI 404
AV+ E R + + + + + Y +P GT + ++ FP P+ F
Sbjct: 332 DAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFD 391
Query: 405 PERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTL 451
P +L D +PF G R C+ A L + + L
Sbjct: 392 PHHFL--DEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSIL 436
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 71/189 (37%), Gaps = 29/189 (15%)
Query: 281 LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYD 340
L + S +LLAG TT LL +I R+ + A +
Sbjct: 226 LDDEEAANFSTALLLAG----HITTTVLLGNIVRTLDEHPAHWDAAA------------E 269
Query: 341 GCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGP 400
A+++E R P + R K T ++G +PA + T + R S P
Sbjct: 270 DPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDP 329
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTC----IARRSAEQNLQVLIMKTLAVTQN 456
D+F P R + A Q L FGHG C +AR L+ +I + +T +
Sbjct: 330 DRFDPSR--KSGGAAQ-------LSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVD 380
Query: 457 QVSCRLSQY 465
+ RL +
Sbjct: 381 RDDERLRHF 389
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 71/189 (37%), Gaps = 29/189 (15%)
Query: 281 LSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYD 340
L + S +LLAG TT LL +I R+ + A +
Sbjct: 246 LDDEEAANFSTALLLAG----HITTTVLLGNIVRTLDEHPAHWDAAA------------E 289
Query: 341 GCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGP 400
A+++E R P + R K T ++G +PA + T + R S P
Sbjct: 290 DPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDP 349
Query: 401 DQFIPERWLREDPAKQCVSPYLVLPFGHGPRTC----IARRSAEQNLQVLIMKTLAVTQN 456
D+F P R + A Q L FGHG C +AR L+ +I + +T +
Sbjct: 350 DRFDPSR--KSGGAAQ-------LSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVD 400
Query: 457 QVSCRLSQY 465
+ RL +
Sbjct: 401 RDDERLRHF 409
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 16/151 (10%)
Query: 285 DIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAY 344
D+ G + L+ ++ Y F+L I+ + + + +A++ S DY
Sbjct: 185 DLTGKIANSNLSELEKEGY---FILLMIAGNETTTNLIGNAIEDFTL--YNSWDYVREKG 239
Query: 345 AKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFI 404
A ++E R SP + R+ ++ + + G L + R + F PD FI
Sbjct: 240 ALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFI 299
Query: 405 PERWLREDPAKQCVSPYLVLPFGHGPRTCIA 435
P+R +P L FG G C+
Sbjct: 300 PDR-----------TPNPHLSFGSGIHLCLG 319
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 30/204 (14%)
Query: 247 EQALKFISQKSSRVASVQTNQ-ATSLLENYLANPKLSRRDIVGMSVDILLAGIDTSAYTT 305
EQA ++ R T+ ++L++ LS ++++ +++ +L+AG +++
Sbjct: 204 EQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQI 263
Query: 306 CFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSPISVG--VG 363
+Y + +++L D + ++E R P+ VG V
Sbjct: 264 ADFVYLLMTRPELRRQLL----------------DRPELIPSAVEELTRWVPLGVGTAVP 307
Query: 364 RILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLV 423
R ++ L G + AG + + R FP D+ +R +P
Sbjct: 308 RYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR-----------TPNQH 356
Query: 424 LPFGHGPRTCIARRSAEQNLQVLI 447
L FGHG C+ A LQV +
Sbjct: 357 LGFGHGVHHCLGAPLARVELQVAL 380
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 30/204 (14%)
Query: 247 EQALKFISQKSSRVASVQTNQ-ATSLLENYLANPKLSRRDIVGMSVDILLAGIDTSAYTT 305
EQA ++ R T+ ++L++ LS ++++ +++ +L+AG +++
Sbjct: 204 EQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQI 263
Query: 306 CFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVG-- 363
+Y + +++L D + ++E R P+ VG
Sbjct: 264 ADFVYLLMTRPELRRQLL----------------DRPELIPSAVEELTRWVPLGVGTAFP 307
Query: 364 RILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLV 423
R ++ L G + AG + + R FP D+ +R +P
Sbjct: 308 RYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR-----------TPNQH 356
Query: 424 LPFGHGPRTCIARRSAEQNLQVLI 447
L FGHG C+ A LQV +
Sbjct: 357 LGFGHGVHHCLGAPLARVELQVAL 380
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 30/204 (14%)
Query: 247 EQALKFISQKSSRVASVQTNQ-ATSLLENYLANPKLSRRDIVGMSVDILLAGIDTSAYTT 305
EQA ++ R T+ ++L++ LS ++++ +++ +L+AG +++
Sbjct: 204 EQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQI 263
Query: 306 CFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVG-- 363
+Y + +++L D + ++E R P+ VG
Sbjct: 264 ADFVYLLMTRPELRRQLL----------------DRPELIPSAVEELTRWVPLGVGTAAP 307
Query: 364 RILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLV 423
R ++ L G + AG + + R FP D+ +R +P
Sbjct: 308 RYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR-----------TPNQH 356
Query: 424 LPFGHGPRTCIARRSAEQNLQVLI 447
L FGHG C+ A LQV +
Sbjct: 357 LGFGHGVHHCLGAPLARVELQVAL 380
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 358 ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQ 416
+++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 286 VALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP--- 342
Query: 417 CVSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 343 -------LGFGFGDHRCIAEHLAKAELTTV 365
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 358 ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQ 416
+++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 285 VALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP--- 341
Query: 417 CVSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 342 -------LGFGFGDHRCIAEHLAKAELTTV 364
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 41/199 (20%)
Query: 264 QTNQATSLLENYLA-----NPKLSRRDIVGMSVDILLAGIDTS----AYTTCFLLYHISR 314
+T +LL + LA +LS+ ++V M++ +L+AG +T+ LL H
Sbjct: 199 RTEPDDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD- 257
Query: 315 SASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRL-SPISVGVGRILNKETVLS 373
Q++L + L ++SA ++E R SP+S R ++ S
Sbjct: 258 ----QRKLLAEDPSL----ISSA-----------VEEFLRFDSPVSQAPIRFTAEDVTYS 298
Query: 374 GYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTC 433
G +PAG + + + R + + P PD R D + FGHG C
Sbjct: 299 GVTIPAGEMVMLGLAAANRDADWMPEPD--------RLDITRDASGGVF---FGHGIHFC 347
Query: 434 IARRSAEQNLQVLIMKTLA 452
+ + A +V I + A
Sbjct: 348 LGAQLARLEGRVAIGRLFA 366
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 41/199 (20%)
Query: 264 QTNQATSLLENYLA-----NPKLSRRDIVGMSVDILLAGIDTS----AYTTCFLLYHISR 314
+T +LL + LA +LS+ ++V M++ +L+AG +T+ LL H
Sbjct: 199 RTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD- 257
Query: 315 SASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRL-SPISVGVGRILNKETVLS 373
Q++L + L ++SA ++E R SP+S R ++ S
Sbjct: 258 ----QRKLLAEDPSL----ISSA-----------VEEFLRFDSPVSQAPIRFTAEDVTYS 298
Query: 374 GYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTC 433
G +PAG + + + R + + P PD R D + FGHG C
Sbjct: 299 GVTIPAGEMVMLGLAAANRDADWMPEPD--------RLDITRDASGGVF---FGHGIHFC 347
Query: 434 IARRSAEQNLQVLIMKTLA 452
+ + A +V I + A
Sbjct: 348 LGAQLARLEGRVAIGRLFA 366
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 19/144 (13%)
Query: 380 GTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPA-KQCVSPYLV---LPFGHGPRTCIA 435
G T+N ++ + PDQF L+ +PA + + P ++ P H RT IA
Sbjct: 265 GGNDTTRNSMTGGVLALHKNPDQFAK---LKANPALVETMVPEIIRWQTPLAHMRRTAIA 321
Query: 436 RRSAEQNLQVLIMKTLAVTQNQVSCRLSQYFPSPDQFIPERWLRKDPAKQCVSPYLVLPF 495
+E + + V R + P++FI +R P L F
Sbjct: 322 --DSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR----------PRPRQHLSF 369
Query: 496 GHGPRTCIARRSAEQNLQVLIMKI 519
G G C+ R AE L++L +I
Sbjct: 370 GFGIHRCVGNRLAEMQLRILWEEI 393
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 288 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 343
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 344 ------LGFGFGDHRCIAEHLAKAELTTV 366
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 286 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 341
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 342 ------LGFGFGDHRCIAEHLAKAELTTV 364
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 286 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 341
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 342 ------LGFGFGDHRCIAEHLAKAELTTV 364
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 287 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 342
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 343 ------LGFGFGDHRCIAEHLAKAELTTV 365
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 286 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 341
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 342 ------LGFGFGDHRCIAEHLAKAELTTV 364
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 287 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 342
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 343 ------LGFGFGDHRCIAEHLAKAELTTV 365
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 286 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 341
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 342 ------LGFGFGDHRCIAEHLAKAELTTV 364
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 286 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 341
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 342 ------LGFGFGDHRCIAEHLAKAELTTV 364
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 287 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 342
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 343 ------LGFGFGDHRCIAEHLAKAELTTV 365
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQF-IPERWLREDPAKQC 417
++ + R ++ ++ V A + NQ + R + F PD+F + +W +DP
Sbjct: 286 ALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP---- 341
Query: 418 VSPYLVLPFGHGPRTCIARRSAEQNLQVL 446
L FG G CIA A+ L +
Sbjct: 342 ------LGFGFGDHRCIAEHLAKAELTTV 364
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 53/217 (24%)
Query: 280 KLSRRDIVGMSVDILLAGIDTS----AYTTCFLLYHISRSASAQQR---LFSAVKHLKR- 331
+L+ +++GM+ +L+AG +T+ A LL H + A+ + L AV+ + R
Sbjct: 247 RLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRY 306
Query: 332 -GSVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVS 390
G V SA Y F + P+ L G +PAG + +
Sbjct: 307 EGPVESATY------------RFPVEPVD------------LDGTVIPAGDTVLVVLADA 342
Query: 391 CRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCI----ARRSAEQNLQVL 446
R + FP P +F +R D A L FGHG CI AR A ++ L
Sbjct: 343 HRTPERFPDPHRFD----IRRDTAGH-------LAFGHGIHFCIGAPLARLEARIAVRAL 391
Query: 447 IMKTLAVTQNQVSCRLSQYFPSPD----QFIPERWLR 479
+ + + + VS ++P+P + +P RW R
Sbjct: 392 LERCPDLALD-VSPGELVWYPNPMIRGLKALPIRWRR 427
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 53/217 (24%)
Query: 280 KLSRRDIVGMSVDILLAGIDTS----AYTTCFLLYHISRSASAQQR---LFSAVKHLKR- 331
+L+ +++GM+ +L+AG +T+ A LL H + A+ + L AV+ + R
Sbjct: 247 RLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRY 306
Query: 332 -GSVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVS 390
G V SA Y F + P+ L G +PAG + +
Sbjct: 307 EGPVESATY------------RFPVEPVD------------LDGTVIPAGDTVLVVLADA 342
Query: 391 CRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCI----ARRSAEQNLQVL 446
R + FP P +F +R D A L FGHG CI AR A ++ L
Sbjct: 343 HRTPERFPDPHRFD----IRRDTAGH-------LAFGHGIHFCIGAPLARLEARIAVRAL 391
Query: 447 IMKTLAVTQNQVSCRLSQYFPSPD----QFIPERWLR 479
+ + + + VS ++P+P + +P RW R
Sbjct: 392 LERCPDLALD-VSPGELVWYPNPMIRGLKALPIRWRR 427
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 53/217 (24%)
Query: 280 KLSRRDIVGMSVDILLAGIDTS----AYTTCFLLYHISRSASAQQR---LFSAVKHLKR- 331
+L+ +++GM+ +L+AG +T+ A LL H + A+ + L AV+ + R
Sbjct: 247 RLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRY 306
Query: 332 -GSVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVS 390
G V SA Y F + P+ L G +PAG + +
Sbjct: 307 EGPVESATY------------RFPVEPVD------------LDGTVIPAGDTVLVVLADA 342
Query: 391 CRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCI----ARRSAEQNLQVL 446
R + FP P +F +R D A L FGHG CI AR A ++ L
Sbjct: 343 HRTPERFPDPHRFD----IRRDTAGH-------LAFGHGIHFCIGAPLARLEARIAVRAL 391
Query: 447 IMKTLAVTQNQVSCRLSQYFPSPD----QFIPERWLR 479
+ + + + VS ++P+P + +P RW R
Sbjct: 392 LERCPDLALD-VSPGELVWYPNPMIRGLKALPIRWRR 427
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 23/146 (15%)
Query: 334 VTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRL 393
++ A+ + +++KE+ RLS S+ + R ++ L H+ G+ + ++ +
Sbjct: 318 LSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTL---HLEDGSYNIRKDDIIALY 373
Query: 394 SQY-------FPGPDQFIPERWLREDPAKQCVS-------PYLVLPFGHGPRTCIARRSA 439
Q +P P F +R+L E+ + Y +PFG G C R A
Sbjct: 374 PQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFA 433
Query: 440 EQNL-QVLIMK----TLAVTQNQVSC 460
+ Q LI+ L + + Q C
Sbjct: 434 IHEIKQFLILMLSYFELELIEGQAKC 459
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 23/146 (15%)
Query: 334 VTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRL 393
++ A+ + +++KE+ RLS S+ + R ++ L H+ G+ + ++ +
Sbjct: 318 LSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTL---HLEDGSYNIRKDDIIALY 373
Query: 394 SQY-------FPGPDQFIPERWLREDPAKQCVS-------PYLVLPFGHGPRTCIARRSA 439
Q +P P F +R+L E+ + Y +PFG G C R A
Sbjct: 374 PQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFA 433
Query: 440 EQNL-QVLIMK----TLAVTQNQVSC 460
+ Q LI+ L + + Q C
Sbjct: 434 IHEIKQFLILMLSYFELELIEGQAKC 459
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 44/255 (17%)
Query: 238 LKMAHGF-IEEQALKFISQKSSRVASVQTNQA----TSLLENYLANPKLSRRDIVGMSVD 292
L +HG + E+A ++ S + ++++ A TSLL + +++ + VG++V
Sbjct: 179 LSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVL 238
Query: 293 ILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKET 352
+ + G + + +SR A+ RL S + R + E
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAE-RLRSEPEIRPRA----------------IDEL 281
Query: 353 FRLSP--ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLR 410
R P +VG+ RI ++ + G + AG + R + FP PD+ ER
Sbjct: 282 LRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--- 338
Query: 411 EDPAKQCVSPYLVLPFGHGPRTC----IARRSAEQNLQVLIMKT----LAVTQNQVSCRL 462
SP + FG GP C +AR +E + ++ + LAV V +
Sbjct: 339 --------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKK 390
Query: 463 SQYFPSPDQFIPERW 477
P + +P W
Sbjct: 391 GALIRGP-EALPVTW 404
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 44/255 (17%)
Query: 238 LKMAHGF-IEEQALKFISQKSSRVASVQTNQA----TSLLENYLANPKLSRRDIVGMSVD 292
L +HG + E+A ++ S + ++++ A TSLL + +++ + VG++V
Sbjct: 179 LSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVL 238
Query: 293 ILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKET 352
+ + G + + +SR A+ RL S + R + E
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAE-RLRSEPEIRPRA----------------IDEL 281
Query: 353 FRLSP--ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLR 410
R P +VG+ RI ++ + G + AG + R + FP PD+ ER
Sbjct: 282 LRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--- 338
Query: 411 EDPAKQCVSPYLVLPFGHGPRTC----IARRSAEQNLQVLIMKT----LAVTQNQVSCRL 462
SP + FG GP C +AR +E + ++ + LAV V +
Sbjct: 339 --------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKK 390
Query: 463 SQYFPSPDQFIPERW 477
P + +P W
Sbjct: 391 GALIRGP-EALPVTW 404
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/182 (18%), Positives = 69/182 (37%), Gaps = 27/182 (14%)
Query: 271 LLENYLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLK 330
L+ L L ++V +++ +L+AG +T+ + ++H +
Sbjct: 218 LIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIAL-------------GALTLIQHPE 264
Query: 331 RGSVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVS 390
+ V D V++E R + +S + R+ ++ + G + AG + +
Sbjct: 265 QIDVLLRD---PGAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLM 321
Query: 391 CRLSQYFPGPDQFIPERWLREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKT 450
R ++ + PD F R R + FGHG C+ + A L++ +
Sbjct: 322 NRDAKAYENPDIFDARRNARHH-----------VGFGHGIHQCLGQNLARAELEIALGGL 370
Query: 451 LA 452
A
Sbjct: 371 FA 372
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 44/255 (17%)
Query: 238 LKMAHGF-IEEQALKFISQKSSRVASVQTNQA----TSLLENYLANPKLSRRDIVGMSVD 292
L +HG + E+A ++ S + ++++ A TSLL + +++ + VG++V
Sbjct: 179 LSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVL 238
Query: 293 ILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKET 352
+ + G + + +SR A+ RL S + R + E
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAE-RLRSEPEIRPRA----------------IDEL 281
Query: 353 FRLSP--ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLR 410
R P +VG+ RI ++ + G + AG + R + FP PD+ ER
Sbjct: 282 LRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--- 338
Query: 411 EDPAKQCVSPYLVLPFGHGPRTC----IARRSAEQNLQVLIMKT----LAVTQNQVSCRL 462
SP + FG GP C +AR +E + ++ + LAV V +
Sbjct: 339 --------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKK 390
Query: 463 SQYFPSPDQFIPERW 477
P + +P W
Sbjct: 391 GALIRGP-EALPVTW 404
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 44/255 (17%)
Query: 238 LKMAHGF-IEEQALKFISQKSSRVASVQTNQA----TSLLENYLANPKLSRRDIVGMSVD 292
L +HG + E+A ++ S + ++++ A TSLL + +++ + VG++V
Sbjct: 179 LSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVL 238
Query: 293 ILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKET 352
+ + G + + +SR A+ RL S + R + E
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAE-RLRSEPEIRPRA----------------IDEL 281
Query: 353 FRLSP--ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLR 410
R P +VG+ RI ++ + G + AG + R + FP PD+ ER
Sbjct: 282 LRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--- 338
Query: 411 EDPAKQCVSPYLVLPFGHGPRTC----IARRSAEQNLQVLIMKT----LAVTQNQVSCRL 462
SP + FG GP C +AR +E + ++ + LAV V +
Sbjct: 339 --------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKK 390
Query: 463 SQYFPSPDQFIPERW 477
P + +P W
Sbjct: 391 GALIRGP-EALPVTW 404
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 44/255 (17%)
Query: 238 LKMAHGF-IEEQALKFISQKSSRVASVQTNQA----TSLLENYLANPKLSRRDIVGMSVD 292
L +HG + E+A ++ S + ++++ A TSLL + +++ + VG++V
Sbjct: 179 LSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVL 238
Query: 293 ILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKET 352
+ + G + + +SR A+ RL S + R + E
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAE-RLRSEPEIRPRA----------------IDEL 281
Query: 353 FRLSP--ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLR 410
R P +VG+ RI ++ + G + AG + R + FP PD+ ER
Sbjct: 282 LRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--- 338
Query: 411 EDPAKQCVSPYLVLPFGHGPRTC----IARRSAEQNLQVLIMKT----LAVTQNQVSCRL 462
SP + FG GP C +AR +E + ++ + LAV V +
Sbjct: 339 --------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKK 390
Query: 463 SQYFPSPDQFIPERW 477
P + +P W
Sbjct: 391 GALIRGP-EALPVTW 404
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 44/255 (17%)
Query: 238 LKMAHGF-IEEQALKFISQKSSRVASVQTNQA----TSLLENYLANPKLSRRDIVGMSVD 292
L +HG + E+A ++ S + ++++ A TSLL + +++ + VG++V
Sbjct: 179 LSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVL 238
Query: 293 ILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKET 352
+ + G + + +SR A+ RL S + R + E
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAE-RLRSEPEIRPRA----------------IDEL 281
Query: 353 FRLSP--ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLR 410
R P +VG+ RI ++ + G + AG + R + FP PD+ ER
Sbjct: 282 LRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--- 338
Query: 411 EDPAKQCVSPYLVLPFGHGPRTC----IARRSAEQNLQVLIMKT----LAVTQNQVSCRL 462
SP + FG GP C +AR +E + ++ + LAV V +
Sbjct: 339 --------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKK 390
Query: 463 SQYFPSPDQFIPERW 477
P + +P W
Sbjct: 391 GALIRGP-EALPVTW 404
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 44/255 (17%)
Query: 238 LKMAHGF-IEEQALKFISQKSSRVASVQTNQA----TSLLENYLANPKLSRRDIVGMSVD 292
L +HG + E+A ++ S + ++++ A TSLL + +++ + VG++V
Sbjct: 179 LSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVL 238
Query: 293 ILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKET 352
+ + G + + +SR A+ RL S + R + E
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAE-RLRSEPEIRPRA----------------IDEL 281
Query: 353 FRLSP--ISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLR 410
R P +VG+ RI ++ + G + AG + R + FP PD+ ER
Sbjct: 282 LRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--- 338
Query: 411 EDPAKQCVSPYLVLPFGHGPRTC----IARRSAEQNLQVLIMKT----LAVTQNQVSCRL 462
SP + FG GP C +AR +E + ++ + LAV V +
Sbjct: 339 --------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKK 390
Query: 463 SQYFPSPDQFIPERW 477
P + +P W
Sbjct: 391 GALIRGP-EALPVTW 404
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 332 GSVTSADYDGCAYAKAVLKETFRLSP-ISVGVGRI---LNKETVLSGYHVPAGTLAVTQN 387
G +T + K+V+ E R P ++ GR L E+ + + V AG +
Sbjct: 334 GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQ 393
Query: 388 QVSCRLSQYFPGPDQFIPERWLREDPAK 415
++ R + F D+F+PER++ E+ K
Sbjct: 394 PLATRDPKIFDRADEFVPERFVGEEGEK 421
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 332 GSVTSADYDGCAYAKAVLKETFRLSP-ISVGVGRI---LNKETVLSGYHVPAGTLAVTQN 387
G +T + K+V+ E R P ++ GR L E+ + + V AG +
Sbjct: 334 GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQ 393
Query: 388 QVSCRLSQYFPGPDQFIPERWLREDPAK 415
++ R + F D+F+PER++ E+ K
Sbjct: 394 PLATRDPKIFDRADEFVPERFVGEEGEK 421
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 40/104 (38%)
Query: 304 TTCFLLYHISRSASAQQRLFSAVKHLKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVG 363
TC LL + +A+ L+ +A + A AV++ET R P V
Sbjct: 248 ATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGSRASAVIEETMRYDPPVQLVS 307
Query: 364 RILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPER 407
R + + + VP G + + R PD+F P+R
Sbjct: 308 RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR 351
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
Query: 269 TSLLENYLANPKLSRRDIVGMSVDILLAGIDTSAYTTCFLLYHISRSASAQQRLFSAVKH 328
+SL+E + +LS R+I + +++AG +T+ + +SR + R +S
Sbjct: 247 SSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWS---- 302
Query: 329 LKRGSVTSADYDGCAYAKAVLKETFRLSPISVGVGRILNKETVLSGYHVPAG 380
D+DG A ++E R + V + R L ++ L G + AG
Sbjct: 303 ---------DFDGL--APTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAG 343
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 20/127 (15%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCV 418
SVG+ RI ++ + G + AG + R FP PD+ +R DP
Sbjct: 293 SVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR----DP----- 343
Query: 419 SPYLVLPFGHGPRTC----IARRSAEQNLQVLIMK----TLAVTQNQVSCRLSQYFPSPD 470
+P+L +G+G C +AR E + L+ + LAV QV+ R P
Sbjct: 344 NPHLA--YGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGP- 400
Query: 471 QFIPERW 477
+ +P W
Sbjct: 401 RTLPCTW 407
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 20/127 (15%)
Query: 359 SVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPAKQCV 418
SVG+ RI ++ + G + AG + R FP PD+ +R DP
Sbjct: 293 SVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR----DP----- 343
Query: 419 SPYLVLPFGHGPRTC----IARRSAEQNLQVLIMK----TLAVTQNQVSCRLSQYFPSPD 470
+P+L +G+G C +AR E + L+ + LAV QV+ R P
Sbjct: 344 NPHLA--YGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGP- 400
Query: 471 QFIPERW 477
+ +P W
Sbjct: 401 RTLPCTW 407
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
Query: 349 LKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERW 408
++E RL+ G+ R ++ + +PAG + + R + + GPD
Sbjct: 286 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQY-GPDA------ 338
Query: 409 LREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
E +C P +L F HG C+ +A +V + + LA
Sbjct: 339 -AELDVTRC--PRNILTFSHGAHHCLGAAAARMQCRVALTELLA 379
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
Query: 349 LKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERW 408
++E RL+ G+ R ++ + +PAG + + R + + GPD
Sbjct: 286 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQY-GPDA------ 338
Query: 409 LREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
E +C P +L F HG C+ +A +V + + LA
Sbjct: 339 -AELDVTRC--PRNILTFSHGAHHCLGAAAARMQCRVALTELLA 379
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
Query: 349 LKETFRLSPISVGVGRILNKETVLSGYHVPAGTLAVTQNQVSCRLSQYFPGPDQFIPERW 408
++E RL+ G+ R ++ + +PAG + + R + + GPD
Sbjct: 287 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQY-GPDA------ 339
Query: 409 LREDPAKQCVSPYLVLPFGHGPRTCIARRSAEQNLQVLIMKTLA 452
E +C P +L F HG C+ +A +V + + LA
Sbjct: 340 -AELDVTRC--PRNILTFSHGAHHCLGAAAARMQCRVALTELLA 380
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 324 SAVKHLKRGSVTSADYDGCAYAKAVLKETFRLS-PISVGVGRILNKETVLS---GYHVPA 379
A+K G+VT + K+V+ E+ R+ P+ G+ + T+ S + V
Sbjct: 309 GAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKK 368
Query: 380 GTLAVTQNQVSCRLSQYFPGPDQFIPERWLREDPA 414
G + + + + F P++++P+R++ + A
Sbjct: 369 GEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEA 403
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,257,072
Number of Sequences: 62578
Number of extensions: 627808
Number of successful extensions: 1557
Number of sequences better than 100.0: 156
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 1378
Number of HSP's gapped (non-prelim): 255
length of query: 520
length of database: 14,973,337
effective HSP length: 103
effective length of query: 417
effective length of database: 8,527,803
effective search space: 3556093851
effective search space used: 3556093851
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)