Query psy18223
Match_columns 264
No_of_seqs 279 out of 2204
Neff 6.6
Searched_HMMs 46136
Date Fri Aug 16 16:51:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18223.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18223hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0719|consensus 100.0 6.6E-57 1.4E-61 391.5 17.4 237 2-257 1-237 (264)
2 COG0484 DnaJ DnaJ-class molecu 99.9 1.4E-29 3E-34 236.5 -2.0 184 13-200 2-212 (371)
3 KOG0713|consensus 99.9 8.9E-26 1.9E-30 206.6 6.9 82 5-88 6-87 (336)
4 KOG0712|consensus 99.9 6E-26 1.3E-30 209.5 1.4 172 14-201 3-202 (337)
5 PTZ00037 DnaJ_C chaperone prot 99.9 3.8E-25 8.3E-30 211.8 -1.4 176 13-200 26-223 (421)
6 PRK14286 chaperone protein Dna 99.9 2.4E-24 5.2E-29 203.7 -1.9 182 14-200 3-218 (372)
7 PRK14288 chaperone protein Dna 99.9 4.2E-23 9.1E-28 195.1 5.6 181 14-199 2-206 (369)
8 PRK14296 chaperone protein Dna 99.9 1.7E-22 3.8E-27 191.0 6.7 181 14-199 3-220 (372)
9 PRK14285 chaperone protein Dna 99.9 1.4E-23 3.1E-28 198.0 -1.3 181 15-200 3-214 (365)
10 PRK14294 chaperone protein Dna 99.9 3.3E-23 7.1E-28 195.6 -1.9 182 14-200 3-212 (366)
11 PRK14287 chaperone protein Dna 99.8 8.3E-22 1.8E-26 186.4 6.0 178 14-197 3-207 (371)
12 PRK14301 chaperone protein Dna 99.8 7.9E-23 1.7E-27 193.4 -1.1 182 14-200 3-212 (373)
13 KOG0717|consensus 99.8 4.6E-21 1E-25 181.0 9.9 72 12-84 5-76 (508)
14 PRK10767 chaperone protein Dna 99.8 1.9E-22 4E-27 190.7 -1.0 182 14-200 3-210 (371)
15 PRK14298 chaperone protein Dna 99.8 2E-21 4.3E-26 184.1 5.7 181 14-199 4-212 (377)
16 COG5269 ZUO1 Ribosome-associat 99.8 2.1E-20 4.6E-25 166.6 9.0 177 4-189 32-243 (379)
17 PRK14290 chaperone protein Dna 99.8 1.4E-20 3E-25 177.7 7.5 94 15-109 3-101 (365)
18 PRK14276 chaperone protein Dna 99.8 3.4E-20 7.3E-25 175.9 8.4 180 14-199 3-217 (380)
19 KOG0718|consensus 99.8 1.5E-20 3.3E-25 177.7 5.6 138 12-163 6-144 (546)
20 PRK14281 chaperone protein Dna 99.8 2E-20 4.4E-25 178.4 6.6 71 15-87 3-73 (397)
21 PRK14297 chaperone protein Dna 99.8 5.4E-20 1.2E-24 174.5 8.8 94 14-109 3-105 (380)
22 PRK14295 chaperone protein Dna 99.8 2.8E-20 6E-25 177.0 5.8 181 14-199 8-233 (389)
23 PRK14278 chaperone protein Dna 99.8 8E-20 1.7E-24 173.2 8.9 182 15-199 3-210 (378)
24 KOG0691|consensus 99.8 7.6E-20 1.6E-24 167.2 7.9 94 14-114 4-97 (296)
25 PRK14282 chaperone protein Dna 99.8 9E-20 2E-24 172.4 8.3 182 14-199 3-223 (369)
26 PRK14299 chaperone protein Dna 99.8 1.1E-19 2.5E-24 166.7 8.7 93 14-109 3-107 (291)
27 PRK14277 chaperone protein Dna 99.8 1E-19 2.2E-24 173.0 8.6 182 14-200 4-227 (386)
28 TIGR02349 DnaJ_bact chaperone 99.8 4.2E-20 9.2E-25 173.6 5.9 179 16-200 1-215 (354)
29 PRK14280 chaperone protein Dna 99.8 9.6E-20 2.1E-24 172.6 8.3 179 14-198 3-213 (376)
30 PRK14279 chaperone protein Dna 99.8 6E-20 1.3E-24 174.9 6.4 70 13-84 7-76 (392)
31 PRK14291 chaperone protein Dna 99.8 3.1E-19 6.8E-24 169.4 8.5 70 14-86 2-71 (382)
32 PTZ00341 Ring-infected erythro 99.8 9.4E-19 2E-23 177.7 8.4 77 9-88 567-643 (1136)
33 PRK14283 chaperone protein Dna 99.8 8E-19 1.7E-23 166.5 6.8 70 14-86 4-73 (378)
34 KOG0716|consensus 99.8 5.3E-19 1.1E-23 157.8 4.7 72 14-87 30-101 (279)
35 PRK14293 chaperone protein Dna 99.7 2.4E-18 5.2E-23 163.0 8.5 93 14-109 2-96 (374)
36 PRK14289 chaperone protein Dna 99.7 2.1E-18 4.6E-23 164.0 8.1 72 14-87 4-75 (386)
37 PRK14292 chaperone protein Dna 99.7 2.8E-18 6E-23 162.4 8.7 93 15-110 2-97 (371)
38 PF00226 DnaJ: DnaJ domain; I 99.7 1.8E-18 3.8E-23 123.7 5.5 64 16-80 1-64 (64)
39 PRK14284 chaperone protein Dna 99.7 2.1E-18 4.5E-23 164.3 6.9 70 15-86 1-70 (391)
40 PRK10266 curved DNA-binding pr 99.7 4.5E-18 9.8E-23 157.1 8.2 92 15-109 4-103 (306)
41 PRK14300 chaperone protein Dna 99.7 4.2E-18 9E-23 161.3 7.6 179 15-199 3-212 (372)
42 KOG0715|consensus 99.7 1.5E-17 3.3E-22 152.4 6.7 71 13-86 41-111 (288)
43 PHA03102 Small T antigen; Revi 99.7 1.2E-16 2.5E-21 133.6 8.0 84 15-110 5-90 (153)
44 smart00271 DnaJ DnaJ molecular 99.6 3.2E-16 6.8E-21 110.3 6.4 59 15-74 1-59 (60)
45 TIGR03835 termin_org_DnaJ term 99.6 5.3E-16 1.2E-20 154.9 8.2 90 15-112 2-92 (871)
46 PHA02624 large T antigen; Prov 99.6 4.5E-16 9.7E-21 153.5 7.2 102 15-128 11-116 (647)
47 cd06257 DnaJ DnaJ domain or J- 99.6 9.2E-16 2E-20 105.9 6.3 55 16-72 1-55 (55)
48 COG2214 CbpA DnaJ-class molecu 99.6 1.2E-15 2.6E-20 130.3 6.3 70 13-83 4-73 (237)
49 KOG0721|consensus 99.6 2.1E-15 4.5E-20 131.0 6.1 73 13-87 97-169 (230)
50 KOG0624|consensus 99.5 2E-14 4.2E-19 133.1 5.7 74 9-82 388-462 (504)
51 PRK01356 hscB co-chaperone Hsc 99.5 4.6E-14 9.9E-19 119.8 6.4 67 15-81 2-71 (166)
52 KOG0550|consensus 99.5 3.5E-14 7.6E-19 133.6 6.2 97 7-107 365-461 (486)
53 PRK05014 hscB co-chaperone Hsc 99.5 6.6E-14 1.4E-18 119.4 6.6 67 15-81 1-72 (171)
54 KOG0722|consensus 99.4 5.4E-14 1.2E-18 124.9 3.1 71 10-83 28-98 (329)
55 PRK00294 hscB co-chaperone Hsc 99.4 2.9E-13 6.3E-18 115.6 6.9 69 13-81 2-75 (173)
56 PRK03578 hscB co-chaperone Hsc 99.4 4.1E-13 8.9E-18 115.0 6.5 71 14-84 5-82 (176)
57 KOG0720|consensus 99.4 2.7E-13 5.8E-18 128.7 5.8 71 10-83 230-300 (490)
58 KOG0714|consensus 99.4 2.6E-13 5.6E-18 121.3 5.0 70 14-84 2-71 (306)
59 PTZ00100 DnaJ chaperone protei 99.3 4.1E-12 8.8E-17 101.5 5.0 51 15-71 65-115 (116)
60 PRK09430 djlA Dna-J like membr 99.3 5.7E-12 1.2E-16 114.6 5.8 58 15-72 200-262 (267)
61 COG5407 SEC63 Preprotein trans 99.2 3.8E-11 8.2E-16 114.0 6.0 77 11-87 94-173 (610)
62 KOG1150|consensus 99.1 9.1E-11 2E-15 101.1 4.7 73 4-78 43-115 (250)
63 PRK01773 hscB co-chaperone Hsc 99.1 3.2E-10 7E-15 96.9 6.6 66 15-80 2-72 (173)
64 TIGR00714 hscB Fe-S protein as 98.9 2E-09 4.3E-14 90.7 6.0 56 27-82 3-61 (157)
65 KOG0568|consensus 98.1 2.4E-06 5.3E-11 75.6 3.7 56 15-73 47-103 (342)
66 KOG1789|consensus 98.1 3.9E-06 8.5E-11 87.0 5.5 52 16-72 1282-1337(2235)
67 KOG0723|consensus 97.7 5.2E-05 1.1E-09 59.5 5.1 49 19-73 60-108 (112)
68 KOG3192|consensus 96.5 0.0029 6.2E-08 53.1 3.6 68 13-80 6-78 (168)
69 COG1076 DjlA DnaJ-domain-conta 96.0 0.0053 1.1E-07 52.4 2.9 56 15-70 113-173 (174)
70 KOG0431|consensus 95.8 0.017 3.7E-07 56.5 5.7 48 22-69 395-447 (453)
71 COG1076 DjlA DnaJ-domain-conta 95.4 0.014 2.9E-07 49.9 3.1 67 16-82 2-73 (174)
72 PF03656 Pam16: Pam16; InterP 92.9 0.22 4.7E-06 40.7 5.1 51 18-74 61-111 (127)
73 KOG0724|consensus 89.9 0.31 6.7E-06 45.5 3.5 60 27-86 4-65 (335)
74 PF13446 RPT: A repeated domai 79.8 5.2 0.00011 27.9 5.0 26 16-41 6-31 (62)
75 PF14687 DUF4460: Domain of un 76.4 6 0.00013 31.5 4.9 50 25-74 4-55 (112)
76 COG5552 Uncharacterized conser 47.9 45 0.00098 24.8 4.5 36 14-49 2-37 (88)
77 PF11833 DUF3353: Protein of u 47.9 23 0.0005 30.9 3.6 38 24-71 1-38 (194)
78 PRK14102 nifW nitrogenase stab 44.4 65 0.0014 25.4 5.3 69 1-69 1-74 (105)
79 PF14117 DUF4287: Domain of un 29.9 34 0.00074 24.3 1.5 15 244-258 2-16 (61)
80 PF07709 SRR: Seven Residue Re 26.6 38 0.00082 16.8 0.9 13 59-71 2-14 (14)
81 PF03206 NifW: Nitrogen fixati 26.4 1.7E+02 0.0037 23.0 5.1 67 3-70 3-74 (105)
82 PF12434 Malate_DH: Malate deh 25.5 77 0.0017 18.9 2.2 17 29-45 10-26 (28)
83 PF03610 EIIA-man: PTS system 23.2 1.4E+02 0.0031 23.0 4.2 45 3-47 13-58 (116)
84 PF10041 DUF2277: Uncharacteri 23.0 2.7E+02 0.0059 20.7 5.2 36 14-49 2-37 (78)
85 PF10384 Scm3: Centromere prot 21.1 1.7E+02 0.0036 20.6 3.6 16 243-258 13-28 (58)
86 cd00084 HMG-box High Mobility 21.1 2.2E+02 0.0048 18.8 4.4 41 33-80 12-52 (66)
87 KOG3442|consensus 20.5 1.6E+02 0.0035 24.1 3.9 31 19-49 63-93 (132)
No 1
>KOG0719|consensus
Probab=100.00 E-value=6.6e-57 Score=391.50 Aligned_cols=237 Identities=41% Similarity=0.642 Sum_probs=215.0
Q ss_pred cchhhHHHHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccc
Q psy18223 2 KGLLQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQ 81 (264)
Q Consensus 2 m~l~~~~~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~ 81 (264)
|..|..|...|.+.|+|+||||.++||..+|++|||+|+|.||||++++....+++++||+|+.||+||||.++|++||.
T Consensus 1 ~~~l~~~~~~f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDe 80 (264)
T KOG0719|consen 1 QFSLEECTGSFNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDE 80 (264)
T ss_pred CcchhhccccccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhc
Confidence 34567799999999999999999999999999999999999999999877788899999999999999999999999999
Q ss_pred cCCCCCCCchhhccCCCCHHHHHHhhccCCCHHHHHhHHHhhcCcHHHHHHHHHHHhcCCCChhhhhhccCCCCCchHHH
Q psy18223 82 TGTLEDEDDEAIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFKRAYVQGEGDMDLIFELVPFTHPSEEDR 161 (264)
Q Consensus 82 ~G~~~~~~~~~~~~~~~~~~~~f~~~F~~vt~edi~~f~~~y~gs~eE~~dl~~~y~~~~g~~~~i~~~v~~~~~~d~~R 161 (264)
+|.+++.+ .+-..+|-++|+.+|..||.++|++|...|+||++|+.||..+|++++|+|..|++.++|+.++|++|
T Consensus 81 tG~idd~~----~d~~~~~~e~~~~iyk~VteedIeef~a~Y~gSEeEk~Dl~~~Y~k~kG~m~~i~~~~l~~d~~De~R 156 (264)
T KOG0719|consen 81 TGSIDDES----GDIDEDWLEFWRAIYKKVTEEDIEEFEANYQGSEEEKKDLLKLYNKFKGKMNRILESVLCSDPKDEDR 156 (264)
T ss_pred cCCCCCcc----chhhhHHHHHHHHHHhhcccccHHHHHHHhcccHHHHHHHHHHHHhcCChHHHHHHhhhcCCcccHHH
Confidence 99998542 22358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCchhhhcchhHHHHHHHhhHHHHHHhHHHHHHhhHHHHHhccCCCCCCCChHHHHHHHHHHHhchh
Q psy18223 162 YRQIIQDLIDKEEVPAFDKFLNEAKSKRNRRKRKFEKEEKLFEKEKAKDERRKKSGVRNSGADSSMDLIAAIQSKNATRE 241 (264)
Q Consensus 162 ~~~ii~~~i~~~~~~~~~~~~~e~k~~k~~r~kk~~~e~k~~eae~~~~e~~ke~~~~~~~~~~~~~L~~~i~~r~~~r~ 241 (264)
|++||+.||.+|+|+.|++|..++++. +.|..+..+|.+ +|+.+. ++ .+..+|.++|++|+..|.
T Consensus 157 ~keiid~~I~~Gev~~yK~y~~~~~~~-K~r~~~~~re~r--~ak~~~------~~------~~~~DL~~~i~~r~~eRk 221 (264)
T KOG0719|consen 157 FKEIIDEAIADGEVKKYKAYEKWASEK-KMRAPKKAREKR--EAKVLA------AK------DNGIDLDAMIEKRGGERK 221 (264)
T ss_pred HHHHHHHHHhcCCchhhhhcccchhhh-hhccccchHHHH--HHHHHH------HH------hcCccHHHHHHHHhhhhh
Confidence 999999999999999999999998766 566666667766 666643 12 134689999999999999
Q ss_pred hchhhHHHHHHHhccC
Q psy18223 242 SGFIGGIANLEAKYEL 257 (264)
Q Consensus 242 ~~~~~~~~~le~ky~~ 257 (264)
..+++||++|++||++
T Consensus 222 ~~~~sl~~SL~~kY~~ 237 (264)
T KOG0719|consen 222 GKFDSLLDSLEEKYGG 237 (264)
T ss_pred hhHHHHHHHHHHHhcc
Confidence 9999999999999986
No 2
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.4e-29 Score=236.47 Aligned_cols=184 Identities=22% Similarity=0.219 Sum_probs=129.0
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch-
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE- 91 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~- 91 (264)
..+|||+||||+++||.+|||+|||+||++||||+|+.++ +|.++|+.|++||+|||||++|+.||.+|..+...+.
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~--~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~ 79 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDK--EAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGF 79 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCH--HHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCc
Confidence 4689999999999999999999999999999999998533 4999999999999999999999999999987764211
Q ss_pred h--hccCCC-CHHHHHHhhccC-------C----CHHHH-----HhHHHhhcCcHH----HHHHHHHHHhcCCCChh-hh
Q psy18223 92 A--IFKSDI-DWTMYWKSLYKD-------V----TEEDI-----INYETKYKGSAE----EINDFKRAYVQGEGDMD-LI 147 (264)
Q Consensus 92 ~--~~~~~~-~~~~~f~~~F~~-------v----t~edi-----~~f~~~y~gs~e----E~~dl~~~y~~~~g~~~-~i 147 (264)
. .++... +|.|+|..||+. - --.|| -.|...|.|... .+...|..|.+.+..-. .+
T Consensus 80 gg~g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~ 159 (371)
T COG0484 80 GGFGFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDP 159 (371)
T ss_pred CCCCcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCC
Confidence 1 111111 689999999930 0 00111 135555777655 45777888887755443 46
Q ss_pred hhccCCCCCchHHHHHH-HHHHHhhcCCCCchhhhc-chhHHHHHHHhhHHHHHH
Q psy18223 148 FELVPFTHPSEEDRYRQ-IIQDLIDKEEVPAFDKFL-NEAKSKRNRRKRKFEKEE 200 (264)
Q Consensus 148 ~~~v~~~~~~d~~R~~~-ii~~~i~~~~~~~~~~~~-~e~k~~k~~r~kk~~~e~ 200 (264)
..|..|.+.+...+.+. .+..+... ||.|..-- ....+|..|.+....++.
T Consensus 160 ~tC~tC~G~G~v~~~~~~g~~~~~~~--C~~C~G~G~~i~~pC~~C~G~G~v~~~ 212 (371)
T COG0484 160 KTCPTCNGSGQVRTVQRTGFFSFQQT--CPTCNGTGKIIKDPCGKCKGKGRVKKK 212 (371)
T ss_pred CcCCCCCCcCeEEEEEeeeEEEEEEE--CCCCccceeECCCCCCCCCCCCeEeee
Confidence 66677776654333222 22223333 89888332 235579999998875443
No 3
>KOG0713|consensus
Probab=99.92 E-value=8.9e-26 Score=206.63 Aligned_cols=82 Identities=40% Similarity=0.583 Sum_probs=74.7
Q ss_pred hhHHHHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCC
Q psy18223 5 LQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGT 84 (264)
Q Consensus 5 ~~~~~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~ 84 (264)
+.+..-....+|||+||||+++||..+||+|||+|||++|||||+++|. |.+.|+.|+.||+|||||++|+.||.+|+
T Consensus 6 ~~~~~~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~--A~e~F~~in~AYEVLsDpekRk~YD~~GE 83 (336)
T KOG0713|consen 6 LSGAEAVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPN--ANEKFKEINAAYEVLSDPEKRKHYDTYGE 83 (336)
T ss_pred hhhhhhhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHH--HHHHHHHHHHHHHHhcCHHHHHHHHhhhH
Confidence 3445556667999999999999999999999999999999999998875 99999999999999999999999999998
Q ss_pred CCCC
Q psy18223 85 LEDE 88 (264)
Q Consensus 85 ~~~~ 88 (264)
.+..
T Consensus 84 egL~ 87 (336)
T KOG0713|consen 84 EGLK 87 (336)
T ss_pred hhhc
Confidence 7665
No 4
>KOG0712|consensus
Probab=99.91 E-value=6e-26 Score=209.54 Aligned_cols=172 Identities=26% Similarity=0.322 Sum_probs=129.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCchhh
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEAI 93 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~~~ 93 (264)
.+.||.||||+++||.+|||+|||+|+++||||||+. +.++|++|+.||+|||||++|.+||.+|..+...+..
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~-----~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~- 76 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD-----AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGG- 76 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc-----HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCC-
Confidence 5789999999999999999999999999999999985 7899999999999999999999999999876653211
Q ss_pred ccCCCCHHHHHHhhcc-----------------CCCHHHHHhHHHhhcCcHH----HHHHHHHHHhcCCCChhhhhhccC
Q psy18223 94 FKSDIDWTMYWKSLYK-----------------DVTEEDIINYETKYKGSAE----EINDFKRAYVQGEGDMDLIFELVP 152 (264)
Q Consensus 94 ~~~~~~~~~~f~~~F~-----------------~vt~edi~~f~~~y~gs~e----E~~dl~~~y~~~~g~~~~i~~~v~ 152 (264)
.+....|.++|. |+ .+|++++ |.|+.. .++.||..|.+..|.-...-.|..
T Consensus 77 ~~g~~~f~~~F~--~g~~~~~~~~rg~~~~~~~~~~Le~~------y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~ 148 (337)
T KOG0712|consen 77 GGGFGGFSQFFG--FGGNGGRGRQRGKDVVHQLKVTLEEL------YMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTT 148 (337)
T ss_pred CCCCccHHHhcc--CCCcCccccccCCCceEEEEEEHHHh------hcCCccceecccCccCCcCCCCCCCCCCCCCCCC
Confidence 112223444444 22 3467777 888554 668899988887775544556777
Q ss_pred CCCCchHHHHHHHH----HHHhhcCCCCchhhh---cchhHHHHHHHhhHHHHHHh
Q psy18223 153 FTHPSEEDRYRQII----QDLIDKEEVPAFDKF---LNEAKSKRNRRKRKFEKEEK 201 (264)
Q Consensus 153 ~~~~~d~~R~~~ii----~~~i~~~~~~~~~~~---~~e~k~~k~~r~kk~~~e~k 201 (264)
|.+.+-..+++.|. +.+... |..|..- ......|+.|.+.+..++++
T Consensus 149 C~GsGv~~~~~~~gPg~~qs~q~~--C~~C~G~G~~~~~kd~C~~C~G~~~v~~kk 202 (337)
T KOG0712|consen 149 CRGSGVQTRTRQMGPGMVQSPQLV--CDSCNGSGETISLKDRCKTCSGAKVVREKK 202 (337)
T ss_pred CCCCCceeEEEeccccccccceeE--eccCCCccccccccccCcccccchhhhhhh
Confidence 77777777766554 455555 7777632 33456789999999877765
No 5
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.89 E-value=3.8e-25 Score=211.81 Aligned_cols=176 Identities=27% Similarity=0.352 Sum_probs=122.7
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCchh
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEA 92 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~~ 92 (264)
...|||+||||+++||.++||+|||+||++||||+++ ..++|+.|++||+|||||.+|+.||.+|..+... .
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~------~~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~-~- 97 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGG------DPEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEG-G- 97 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCc------hHHHHHHHHHHHHHhccHHHHHHHhhhcchhccc-C-
Confidence 3579999999999999999999999999999999986 2479999999999999999999999999765431 1
Q ss_pred hccCCCCHHHHHHhhccCCC-------HHHH-----HhHHHhhcCcHH----HHHHHHHHHhcCCCChhhhhhccCCCCC
Q psy18223 93 IFKSDIDWTMYWKSLYKDVT-------EEDI-----INYETKYKGSAE----EINDFKRAYVQGEGDMDLIFELVPFTHP 156 (264)
Q Consensus 93 ~~~~~~~~~~~f~~~F~~vt-------~edi-----~~f~~~y~gs~e----E~~dl~~~y~~~~g~~~~i~~~v~~~~~ 156 (264)
....+|.++|..||+.-. -.+| -.|...|.|... .+..+|..|.+.++....+..|..|.+.
T Consensus 98 --~~~~d~~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~ 175 (421)
T PTZ00037 98 --EQPADASDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQ 175 (421)
T ss_pred --CCCcchhhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCC
Confidence 113467889999886210 0111 134455877655 4577788888777654445555556555
Q ss_pred chHHHHHH---HHHHHhhcCCCCchhhhc---chhHHHHHHHhhHHHHHH
Q psy18223 157 SEEDRYRQ---IIQDLIDKEEVPAFDKFL---NEAKSKRNRRKRKFEKEE 200 (264)
Q Consensus 157 ~d~~R~~~---ii~~~i~~~~~~~~~~~~---~e~k~~k~~r~kk~~~e~ 200 (264)
+-..+.+. ++...... |+.|...- .....|..|.++...++.
T Consensus 176 G~~~~~~~~g~~~~q~~~~--C~~C~G~G~~i~~~~~C~~C~G~g~v~~~ 223 (421)
T PTZ00037 176 GIRVQIRQMGSMIHQTQST--CNSCNGQGKIIPESKKCKNCSGKGVKKTR 223 (421)
T ss_pred CeEEEEEeecceeeEEEEe--CCCCCCcceeccccccCCcCCCcceeeee
Confidence 53222222 22233333 88887433 234679999998876554
No 6
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.88 E-value=2.4e-24 Score=203.68 Aligned_cols=182 Identities=18% Similarity=0.205 Sum_probs=118.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc--h
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD--E 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~--~ 91 (264)
..|||+||||+++||.++||+|||+||++||||+++.++ ++.++|+.|++||+||+||.+|+.||.+|..+...+ +
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~ 80 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK--ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGG 80 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch--HHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCC
Confidence 369999999999999999999999999999999987443 388999999999999999999999999997543210 0
Q ss_pred ---hhccC----CCCHHHHHHhhccCC--------------CHHHHH-----hHHHhhcCcHH----HHHHHHHHHhcCC
Q psy18223 92 ---AIFKS----DIDWTMYWKSLYKDV--------------TEEDII-----NYETKYKGSAE----EINDFKRAYVQGE 141 (264)
Q Consensus 92 ---~~~~~----~~~~~~~f~~~F~~v--------------t~edi~-----~f~~~y~gs~e----E~~dl~~~y~~~~ 141 (264)
..+.. ..+|.++|+.||+.- .-.||. .|...|.|... .+..+|..|.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G 160 (372)
T PRK14286 81 FGQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSG 160 (372)
T ss_pred CCCCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCC
Confidence 00100 124668899998621 001221 34455666544 4456666666554
Q ss_pred CChhh-hhhccCCCCCchHHHHHHHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHHH
Q psy18223 142 GDMDL-IFELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKEE 200 (264)
Q Consensus 142 g~~~~-i~~~v~~~~~~d~~R~~~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e~ 200 (264)
..-.. +..|..|.+.+...+...+++ ... .|+.|...-. ....|..|+++...++.
T Consensus 161 ~~~~~~~~~C~~C~G~G~v~~~~G~~~-~~~--~C~~C~G~G~~~~~~C~~C~G~g~~~~~ 218 (372)
T PRK14286 161 ASKGSSPTTCPDCGGSGQIRRTQGFFS-VAT--TCPTCRGKGTVISNPCKTCGGQGLQEKR 218 (372)
T ss_pred cCCCCCCccCCCCcCeEEEEEEeceEE-EEE--eCCCCCceeeEecccCCCCCCCcEEecc
Confidence 42221 334444544443222223332 222 3888884432 23468999998865543
No 7
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=4.2e-23 Score=195.06 Aligned_cols=181 Identities=18% Similarity=0.242 Sum_probs=114.2
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch--
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE-- 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~-- 91 (264)
..|||+||||+++||.++||+|||+||++||||+++.++ +|.++|+.|++||+||+||.+|+.||.+|..+.....
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~--~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~ 79 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK--EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGAS 79 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcc--HHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCC
Confidence 379999999999999999999999999999999997543 3889999999999999999999999999975433101
Q ss_pred -hhccCC-CCHHHHHHhhccCC----------CHHHH-----HhHHHhhcCcHH----HHHHHHHHHhcCCCChhhhhhc
Q psy18223 92 -AIFKSD-IDWTMYWKSLYKDV----------TEEDI-----INYETKYKGSAE----EINDFKRAYVQGEGDMDLIFEL 150 (264)
Q Consensus 92 -~~~~~~-~~~~~~f~~~F~~v----------t~edi-----~~f~~~y~gs~e----E~~dl~~~y~~~~g~~~~i~~~ 150 (264)
..+++. .+|.++|..+|+.- ...+| -.|...|.|... .+..+|..|.+.+..-..+..|
T Consensus 80 ~~~~~~~f~~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C 159 (369)
T PRK14288 80 QSDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETC 159 (369)
T ss_pred ccccccchhhHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCC
Confidence 111110 12334666666410 00111 145555777544 3455666666554432233344
Q ss_pred cCCCCCchHHHHHHHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHH
Q psy18223 151 VPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKE 199 (264)
Q Consensus 151 v~~~~~~d~~R~~~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e 199 (264)
..|.+.+.......+++ .. ..||.|..... ....|..|.+.....+
T Consensus 160 ~~C~G~G~~~~~~g~~~-~~--~~C~~C~G~G~~~~~~C~~C~G~g~v~~ 206 (369)
T PRK14288 160 KQCNGQGQVFMRQGFMS-FA--QTCGACQGKGKIIKTPCQACKGKTYILK 206 (369)
T ss_pred CCCCCCcEEEEEeceEE-EE--EecCCCCCCceEccccCccCCCcceEEE
Confidence 45554443222223321 11 24788874432 2446888888776544
No 8
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.86 E-value=1.7e-22 Score=191.05 Aligned_cols=181 Identities=20% Similarity=0.214 Sum_probs=116.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc-h-
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD-E- 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~-~- 91 (264)
..|||+||||+++||.++||+|||+||++||||++++ + .|.++|+.|++||+|||||.+|+.||.+|..+.... .
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-~--~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~ 79 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-P--DAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGF 79 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c--hHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCc
Confidence 4799999999999999999999999999999999973 2 388999999999999999999999999997543210 0
Q ss_pred -hhcc------------CCCCHHHHHHhhccCC--------CHHHH-----HhHHHhhcCcHH----HHHHHHHHHhcCC
Q psy18223 92 -AIFK------------SDIDWTMYWKSLYKDV--------TEEDI-----INYETKYKGSAE----EINDFKRAYVQGE 141 (264)
Q Consensus 92 -~~~~------------~~~~~~~~f~~~F~~v--------t~edi-----~~f~~~y~gs~e----E~~dl~~~y~~~~ 141 (264)
.+++ ...+|.++|..||+.- .-.+| -.|...|.|... .+..+|..|.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G 159 (372)
T PRK14296 80 SSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSG 159 (372)
T ss_pred CcCCCccccccccccccccccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCc
Confidence 0000 0124557888888510 00111 134455766544 4456666666655
Q ss_pred CChh-hhhhccCCCCCchHHHHHHH---HHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHH
Q psy18223 142 GDMD-LIFELVPFTHPSEEDRYRQI---IQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKE 199 (264)
Q Consensus 142 g~~~-~i~~~v~~~~~~d~~R~~~i---i~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e 199 (264)
.... .+..|..|.+.+...+.+++ +.+... .||.|...-. ....|..|.+....++
T Consensus 160 ~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~--~C~~C~G~G~~~~~~C~~C~G~g~v~~ 220 (372)
T PRK14296 160 AESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSA--KCNVCNGAGKIIKNKCKNCKGKGKYLE 220 (372)
T ss_pred cCCCCCCccCCCCCCCceEEEEEeccceEEEEEe--cCCCcCCcceeecccccCCCCceEEEE
Confidence 4332 24445555555432222211 112222 3888874433 2446888988876544
No 9
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.86 E-value=1.4e-23 Score=197.97 Aligned_cols=181 Identities=19% Similarity=0.218 Sum_probs=117.6
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch---
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE--- 91 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~--- 91 (264)
.|||+||||+++||.++||+|||+|+++||||+++.++ ++.++|+.|++||+||+||.+|..||.+|..+...+.
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~ 80 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK--EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFE 80 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCcc
Confidence 69999999999999999999999999999999987543 3889999999999999999999999999975432110
Q ss_pred ---hhccC----CCCHHHHHHhhccCC-C---------HHHHH-----hHHHhhcCcHH----HHHHHHHHHhcCCCChh
Q psy18223 92 ---AIFKS----DIDWTMYWKSLYKDV-T---------EEDII-----NYETKYKGSAE----EINDFKRAYVQGEGDMD 145 (264)
Q Consensus 92 ---~~~~~----~~~~~~~f~~~F~~v-t---------~edi~-----~f~~~y~gs~e----E~~dl~~~y~~~~g~~~ 145 (264)
.+++. ..+|.++|..||+.- . -.+|. .|...|.|... .+..+|..|.+.+..-.
T Consensus 81 ~~~~g~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 160 (365)
T PRK14285 81 GFSGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKG 160 (365)
T ss_pred ccCCCccccccccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCC
Confidence 01110 134778999998621 0 01111 35555666544 44566666665544221
Q ss_pred h-hhhccCCCCCchHHHHHHHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHHH
Q psy18223 146 L-IFELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKEE 200 (264)
Q Consensus 146 ~-i~~~v~~~~~~d~~R~~~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e~ 200 (264)
. +..|..|.+.+...+-..++ +... .||.|...-. ....|..|+++...++.
T Consensus 161 ~~~~~C~~C~G~G~~~~~~G~~-~~~~--~C~~C~G~G~~~~~~C~~C~G~g~v~~~ 214 (365)
T PRK14285 161 TSPSICNMCNGSGRVMQGGGFF-RVTT--TCPKCYGNGKIISNPCKSCKGKGSLKKK 214 (365)
T ss_pred CCCccCCCccCceeEEecCcee-EEee--ecCCCCCcccccCCCCCCCCCCCEEecc
Confidence 1 33344454444322222333 2222 3888884332 23468899988865443
No 10
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=3.3e-23 Score=195.58 Aligned_cols=182 Identities=18% Similarity=0.210 Sum_probs=116.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch-h
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE-A 92 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~-~ 92 (264)
..|||+||||+++||.++||+|||+||++||||+++.++ ++.++|+.|++||+||+||.+|+.||.+|..+...+. .
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~--~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~ 80 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK--EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFS 80 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCch--HHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCC
Confidence 479999999999999999999999999999999997543 3788999999999999999999999999975432110 0
Q ss_pred h---ccC-CCCHHHHHHhhcc-C-CC----------HHHHH-----hHHHhhcCcHH----HHHHHHHHHhcCCCChh-h
Q psy18223 93 I---FKS-DIDWTMYWKSLYK-D-VT----------EEDII-----NYETKYKGSAE----EINDFKRAYVQGEGDMD-L 146 (264)
Q Consensus 93 ~---~~~-~~~~~~~f~~~F~-~-vt----------~edi~-----~f~~~y~gs~e----E~~dl~~~y~~~~g~~~-~ 146 (264)
+ +.. ..+|.++|..||+ . .. ..+|. .|...|.|... ++..+|..|.+.+..-. .
T Consensus 81 ~~~~~~~~~~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~ 160 (366)
T PRK14294 81 GFSGFDDIFSSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTS 160 (366)
T ss_pred CcCccccchhhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCC
Confidence 1 110 1246678888886 1 00 01221 34555666443 34555555555433211 1
Q ss_pred hhhccCCCCCchHHHHHHHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHHH
Q psy18223 147 IFELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKEE 200 (264)
Q Consensus 147 i~~~v~~~~~~d~~R~~~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e~ 200 (264)
+..|..|.+.+.......+++ ... .||.|..... ....|+.|.++....+.
T Consensus 161 ~~~C~~C~G~G~~~~~~G~~~-~~~--~C~~C~G~G~~~~~~C~~C~G~g~v~~~ 212 (366)
T PRK14294 161 PTTCPQCGGSGQVTQSQGFFS-IRT--TCPRCRGMGKVIVSPCKTCHGQGRVRVS 212 (366)
T ss_pred cccCCCcCCeEEEEEEeeeEE-EEe--eCCCCCCcCeecCcCCCCCCCceEeecc
Confidence 333444444432222223332 222 3888885443 34568899988766443
No 11
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=8.3e-22 Score=186.36 Aligned_cols=178 Identities=16% Similarity=0.154 Sum_probs=112.8
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc--h
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD--E 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~--~ 91 (264)
..|||+||||+++||.++||+|||+||++||||+++. + .+.++|+.|++||+||+||.+|+.||.+|..+...+ .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~--~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~ 79 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-P--DAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGG 79 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-h--hHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCC
Confidence 3699999999999999999999999999999999863 2 478899999999999999999999999997654310 0
Q ss_pred hhccCCCCHHHHHHhhccCCC----------HHHHH-----hHHHhhcCcHH----HHHHHHHHHhcCCCChh-hhhhcc
Q psy18223 92 AIFKSDIDWTMYWKSLYKDVT----------EEDII-----NYETKYKGSAE----EINDFKRAYVQGEGDMD-LIFELV 151 (264)
Q Consensus 92 ~~~~~~~~~~~~f~~~F~~vt----------~edi~-----~f~~~y~gs~e----E~~dl~~~y~~~~g~~~-~i~~~v 151 (264)
.+++...+|.++|+.||+.-. -.||. .|...|.|... .+..+|..|.+.+.... .+..|.
T Consensus 80 ~~~~~f~~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~ 159 (371)
T PRK14287 80 GGAGDFGGFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCS 159 (371)
T ss_pred CCCccccchHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccC
Confidence 011111346789999987200 01111 34444666543 44566666665443221 234455
Q ss_pred CCCCCchHHHHHH----HHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHH
Q psy18223 152 PFTHPSEEDRYRQ----IIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFE 197 (264)
Q Consensus 152 ~~~~~~d~~R~~~----ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~ 197 (264)
.|.+.+.....+. +++. ...|+.|...-. ....|..|.++...
T Consensus 160 ~C~G~G~~~~~~~~~~G~~~~---~~~C~~C~G~G~~~~~~C~~C~G~g~v 207 (371)
T PRK14287 160 HCGGSGQLNVEQNTPFGRVVN---RRVCHHCEGTGKIIKQKCATCGGKGKV 207 (371)
T ss_pred CCCCEEEEEEEEecCCceEEE---EEeCCCCCCCCccccccCCCCCCeeEE
Confidence 5555543222211 1111 223777774332 23457777766544
No 12
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=7.9e-23 Score=193.44 Aligned_cols=182 Identities=21% Similarity=0.233 Sum_probs=113.9
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch--
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE-- 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~-- 91 (264)
..|||+||||+++||.++||+|||+||++||||+++.++ ++.++|+.|++||+||+||.+|+.||.+|..+...++
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~ 80 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNP--EAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGF 80 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCCh--HHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCC
Confidence 369999999999999999999999999999999997543 4888999999999999999999999999975432100
Q ss_pred hhccC----CCCHHHHHHhhcc--CC---------CHHHH-----HhHHHhhcCcHH----HHHHHHHHHhcCCCChh-h
Q psy18223 92 AIFKS----DIDWTMYWKSLYK--DV---------TEEDI-----INYETKYKGSAE----EINDFKRAYVQGEGDMD-L 146 (264)
Q Consensus 92 ~~~~~----~~~~~~~f~~~F~--~v---------t~edi-----~~f~~~y~gs~e----E~~dl~~~y~~~~g~~~-~ 146 (264)
.++.. ..+|.++|..||+ .- .-.+| -.|...|.|... .+..+|..|.+.+.... .
T Consensus 81 ~g~~~~~~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~ 160 (373)
T PRK14301 81 GGFSSAEDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTS 160 (373)
T ss_pred CCcccccccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCC
Confidence 11111 1245677887775 10 00111 134444655433 33445555554433221 1
Q ss_pred hhhccCCCCCchHHHHHHHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHHH
Q psy18223 147 IFELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKEE 200 (264)
Q Consensus 147 i~~~v~~~~~~d~~R~~~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e~ 200 (264)
+..|..|.+.+-..+...+++. .-.|+.|...-. ....|..|.++....+.
T Consensus 161 ~~~C~~C~G~G~v~~~~G~~~~---~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~ 212 (373)
T PRK14301 161 PETCRHCGGSGQVRQSQGFFQI---AVPCPVCRGEGRVITHPCPKCKGSGIVQQT 212 (373)
T ss_pred CcccCCccCeeEEEEEeeeEEE---EEeCCCCCceeeecCCCCCCCCCCceeccc
Confidence 3344445444322222222221 233788874433 23468889988876544
No 13
>KOG0717|consensus
Probab=99.84 E-value=4.6e-21 Score=181.00 Aligned_cols=72 Identities=35% Similarity=0.613 Sum_probs=66.8
Q ss_pred cCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCC
Q psy18223 12 YKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGT 84 (264)
Q Consensus 12 ~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~ 84 (264)
|..++||+||||.++|++.+||++||+|||+||||++|.. -+++++.|+.|+.||+|||||+.|++||++..
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~-ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre 76 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDR-IEEATQQFQLIQAAYEVLSDPQERAWYDSHRE 76 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCcc-HHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence 5568999999999999999999999999999999999844 46799999999999999999999999998775
No 14
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=1.9e-22 Score=190.73 Aligned_cols=182 Identities=21% Similarity=0.243 Sum_probs=116.7
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch--
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE-- 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~-- 91 (264)
..|||+||||+++||.++||+|||+||++||||+++.++ .+.++|+.|++||+||+||.+|..||.+|..+.....
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~ 80 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK--EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGG 80 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCC
Confidence 469999999999999999999999999999999987443 3789999999999999999999999999875443111
Q ss_pred hhccC--C-CC-HHHHHHhhccCC---------CHHHHH-----hHHHhhcCcHH----HHHHHHHHHhcCCCChhh-hh
Q psy18223 92 AIFKS--D-ID-WTMYWKSLYKDV---------TEEDII-----NYETKYKGSAE----EINDFKRAYVQGEGDMDL-IF 148 (264)
Q Consensus 92 ~~~~~--~-~~-~~~~f~~~F~~v---------t~edi~-----~f~~~y~gs~e----E~~dl~~~y~~~~g~~~~-i~ 148 (264)
.+++. + .+ |.++|..||+.- .-.+|. .|...|.|... .+..+|..|.+.+..... +.
T Consensus 81 ~~~~~~~~~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~ 160 (371)
T PRK10767 81 GGFGGGGGFGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPK 160 (371)
T ss_pred CCCCCccccccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCc
Confidence 11111 1 12 567888887520 011121 34445776544 345566656554443221 33
Q ss_pred hccCCCCCchHHHHHHHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHHH
Q psy18223 149 ELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKEE 200 (264)
Q Consensus 149 ~~v~~~~~~d~~R~~~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e~ 200 (264)
.|..|.+.+-....+.+++ ... .|+.|...-. ....|..|.++...++.
T Consensus 161 ~C~~C~G~G~~~~~~g~~~-~~~--~C~~C~G~G~~~~~~C~~C~G~g~v~~~ 210 (371)
T PRK10767 161 TCPTCHGAGQVRMQQGFFT-VQQ--TCPTCHGRGKIIKDPCKKCHGQGRVEKE 210 (371)
T ss_pred cCCCCCCeeEEEEeeceEE-EEE--eCCCCCCceeECCCCCCCCCCCceEeee
Confidence 4555555443222223332 222 4888884332 23468889988766443
No 15
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=2e-21 Score=184.13 Aligned_cols=181 Identities=21% Similarity=0.197 Sum_probs=115.4
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch--
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE-- 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~-- 91 (264)
..|||+||||+++||.++||+|||+||++||||+++.. .+.++|+.|++||+||+||.+|+.||.+|..+.....
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~ 80 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEP---DAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSA 80 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCCh---hHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCc
Confidence 36999999999999999999999999999999998732 3789999999999999999999999999975432100
Q ss_pred -hhcc--CCCCHHHHHHhhccCC---------CHHHH-----HhHHHhhcCcHH----HHHHHHHHHhcCCCChh-hhhh
Q psy18223 92 -AIFK--SDIDWTMYWKSLYKDV---------TEEDI-----INYETKYKGSAE----EINDFKRAYVQGEGDMD-LIFE 149 (264)
Q Consensus 92 -~~~~--~~~~~~~~f~~~F~~v---------t~edi-----~~f~~~y~gs~e----E~~dl~~~y~~~~g~~~-~i~~ 149 (264)
..++ ...+|.++|..||+.- .-.+| -.|...|.|... .+..+|..|.+.+.... .+..
T Consensus 81 ~~~~~~~~~~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~ 160 (377)
T PRK14298 81 EDIFRGADFGGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKR 160 (377)
T ss_pred ccccccCCcCcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCc
Confidence 0011 1134668899988620 00111 134444666544 44566666666544322 2334
Q ss_pred ccCCCCCchHHHHHH---HHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHH
Q psy18223 150 LVPFTHPSEEDRYRQ---IIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKE 199 (264)
Q Consensus 150 ~v~~~~~~d~~R~~~---ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e 199 (264)
|..|.+.+.....+. .+...... |+.|...-. ....|..|+++....+
T Consensus 161 C~~C~G~G~~~~~~~~~~g~~~~~~~--C~~C~G~G~~~~~~C~~C~G~g~v~~ 212 (377)
T PRK14298 161 CPTCGGTGQVTTTRSTPLGQFVTTTT--CSTCHGRGQVIESPCPVCSGTGKVRK 212 (377)
T ss_pred CCCCCCccEEEEEEecCceeEEEEEe--CCCCCCCCcccCCCCCCCCCccEEEE
Confidence 444544442211111 11222233 888874432 2346888888876544
No 16
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=2.1e-20 Score=166.62 Aligned_cols=177 Identities=22% Similarity=0.318 Sum_probs=129.6
Q ss_pred hhhHHHHhcCCCCcccccccCC---CCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhcc
Q psy18223 4 LLQLCEKYYKTKDLYEVLNVDK---TATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYD 80 (264)
Q Consensus 4 l~~~~~~~~~~~d~Y~vLgv~~---~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD 80 (264)
+++...+.|+..|+|.+|||+. .|++.+|.+|.++.+++||||+..........+.|.+|+.||+||+|+.+|..||
T Consensus 32 ~~~~d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyD 111 (379)
T COG5269 32 YTREDFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYD 111 (379)
T ss_pred HHhhhhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcc
Confidence 4567789999999999999997 6899999999999999999999843333347889999999999999999999999
Q ss_pred ccCCCCCCCchhhccCCCCHHHHHHhhcc-----------------CCCHHHHHhHHHhhcCcHH---------------
Q psy18223 81 QTGTLEDEDDEAIFKSDIDWTMYWKSLYK-----------------DVTEEDIINYETKYKGSAE--------------- 128 (264)
Q Consensus 81 ~~G~~~~~~~~~~~~~~~~~~~~f~~~F~-----------------~vt~edi~~f~~~y~gs~e--------------- 128 (264)
+.....+-. ++.......|+++|.++|. ..|..++++||.+|.+.+.
T Consensus 112 S~df~advp-pp~~~t~~~Ffe~w~pvFe~earFSkKqPvPsLg~~dss~keVe~FY~FW~nFdSWRtFE~lded~pdd~ 190 (379)
T COG5269 112 SNDFDADVP-PPRIYTPDEFFEVWEPVFEREARFSKKQPVPSLGPSDSSLKEVEEFYEFWSNFDSWRTFEPLDEDYPDDM 190 (379)
T ss_pred ccccccCCC-CccCCCchhHHHHHHHHHHhhhhccccCCCCCCCCchhHHHHHHHHHHHHHhccccccccchhhhcCcch
Confidence 987554432 2333355789999999995 2345667777777765433
Q ss_pred HHHHHHHHHhcCCCChhhhhhccCCCCCchHHHHHHHHHHHhhcCCCCchhhhcchhHHHH
Q psy18223 129 EINDFKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLNEAKSKR 189 (264)
Q Consensus 129 E~~dl~~~y~~~~g~~~~i~~~v~~~~~~d~~R~~~ii~~~i~~~~~~~~~~~~~e~k~~k 189 (264)
|.+|-.. |...+. -+........|..|++.||+.+.+. +|+++.|+...+..+
T Consensus 191 e~rD~kr-y~e~KN-----r~~r~k~K~~DnaRl~~LV~~A~~~--DPRIK~fkEqeK~~k 243 (379)
T COG5269 191 EERDRKR-YSEAKN-----REKRAKLKNQDNARLKRLVQIAKKR--DPRIKSFKEQEKEMK 243 (379)
T ss_pred hhhhhHH-HHHhhh-----HHHHHhhhchhHHHHHHHHHHHHhc--CcchhhHHHHHHHHH
Confidence 1122111 111111 0111223347899999999999999 999999987776543
No 17
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=1.4e-20 Score=177.73 Aligned_cols=94 Identities=36% Similarity=0.523 Sum_probs=76.4
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCchhhc
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEAIF 94 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~~~~ 94 (264)
.|||+||||+++||..+|++|||+|+++||||+++.+. ..|.++|+.|++||+||+||.+|..||.+|..+.......+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~ 81 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNK-AEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNF 81 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch-hHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCc
Confidence 69999999999999999999999999999999997442 34889999999999999999999999999976442111111
Q ss_pred -----cCCCCHHHHHHhhcc
Q psy18223 95 -----KSDIDWTMYWKSLYK 109 (264)
Q Consensus 95 -----~~~~~~~~~f~~~F~ 109 (264)
....+|.++|..||+
T Consensus 82 ~~~~~~~~~~~~d~f~~~fg 101 (365)
T PRK14290 82 NWDNFTHFSDINDIFNQIFG 101 (365)
T ss_pred cccccccccchhHHHHHHhc
Confidence 111357788888876
No 18
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=3.4e-20 Score=175.94 Aligned_cols=180 Identities=19% Similarity=0.196 Sum_probs=115.2
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc--h
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD--E 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~--~ 91 (264)
..|||+||||+++||.++||+|||+||++||||+++.. .+.++|+.|++||+||+||.+|+.||.+|..+...+ .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~---~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~ 79 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEP---GAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGG 79 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---CHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCC
Confidence 46999999999999999999999999999999999742 378999999999999999999999999997543210 0
Q ss_pred -----hhcc---CCCCHHHHHHhhccCC----------CHHHHH-----hHHHhhcCcHH----HHHHHHHHHhcCCCCh
Q psy18223 92 -----AIFK---SDIDWTMYWKSLYKDV----------TEEDII-----NYETKYKGSAE----EINDFKRAYVQGEGDM 144 (264)
Q Consensus 92 -----~~~~---~~~~~~~~f~~~F~~v----------t~edi~-----~f~~~y~gs~e----E~~dl~~~y~~~~g~~ 144 (264)
.++. ...+|.++|+.||+.- .-.+|. .|...|.|... .+..+|..|.+.+..-
T Consensus 80 ~~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~ 159 (380)
T PRK14276 80 GAGGFGGFDGSGGFGGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKP 159 (380)
T ss_pred CCCCCCCccccccccchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCC
Confidence 0111 1135678899998620 001111 34455666543 4455666666654422
Q ss_pred h-hhhhccCCCCCchHHHHH----HHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHH
Q psy18223 145 D-LIFELVPFTHPSEEDRYR----QIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKE 199 (264)
Q Consensus 145 ~-~i~~~v~~~~~~d~~R~~----~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e 199 (264)
. .+..|..|.+.+.....+ .+++. .-.||.|..... ....|..|.++....+
T Consensus 160 ~~~~~~C~~C~G~G~~~~~~~~~~G~~~~---~~~C~~C~G~G~~~~~~C~~C~G~g~~~~ 217 (380)
T PRK14276 160 GTSPVTCGKCHGSGVITVDTQTPLGMMRR---QVTCDVCHGTGKEIKEPCQTCHGTGHEKQ 217 (380)
T ss_pred CCCCccCCCCCCeeEEEEEEecCCceEEE---EEECCCCCCCCccccCCCCCCCCceEEEE
Confidence 1 133444555444322111 12222 223788874432 2345888888776443
No 19
>KOG0718|consensus
Probab=99.81 E-value=1.5e-20 Score=177.65 Aligned_cols=138 Identities=30% Similarity=0.479 Sum_probs=101.5
Q ss_pred cCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc
Q psy18223 12 YKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVT-EEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD 90 (264)
Q Consensus 12 ~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~-~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~ 90 (264)
..+.+||.+|||+++||.+||++|||++++.|||||+. .+.+..|++.|+.|+.||+|||||++|++||.+|..+..-
T Consensus 6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t- 84 (546)
T KOG0718|consen 6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT- 84 (546)
T ss_pred cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc-
Confidence 34579999999999999999999999999999999985 5678889999999999999999999999999999987751
Q ss_pred hhhccCCCCHHHHHHhhccCCCHHHHHhHHHhhcCcHHHHHHHHHHHhcCCCChhhhhhccCCCCCchHHHHH
Q psy18223 91 EAIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFKRAYVQGEGDMDLIFELVPFTHPSEEDRYR 163 (264)
Q Consensus 91 ~~~~~~~~~~~~~f~~~F~~vt~edi~~f~~~y~gs~eE~~dl~~~y~~~~g~~~~i~~~v~~~~~~d~~R~~ 163 (264)
.+ |...|..-|+++|.+=+..-+--.+|+.- ..-....|.+.-.++..+.--..|+.||-
T Consensus 85 -------~g----wEl~~r~~tpeEIreE~Erl~r~~de~~l--~qr~~P~g~i~i~v~~t~lF~~~d~~~~p 144 (546)
T KOG0718|consen 85 -------EG----WELGFRGKTPEEIREEYERLQRERDERRL--QQRVQPTGEITINVNATPLFARNDESRFP 144 (546)
T ss_pred -------cC----ceeecCCCCHHHHHHHHHHHHHHHHHHHH--HhhcCCCceEEEEecchhhhccCccccCC
Confidence 23 45566778999997644333333333322 23455666553333333233345556663
No 20
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=2e-20 Score=178.38 Aligned_cols=71 Identities=39% Similarity=0.624 Sum_probs=65.2
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCC
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLED 87 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~ 87 (264)
.|||+||||+++||.++||+|||+|+++||||+++... .+.++|+.|++||+||+||.+|+.||.+|..+.
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~ 73 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK--EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch--HHHHHHHHHHHHHHHhhhhhhhhhhhhccchhh
Confidence 69999999999999999999999999999999997443 378999999999999999999999999997543
No 21
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=5.4e-20 Score=174.54 Aligned_cols=94 Identities=35% Similarity=0.512 Sum_probs=76.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc-h-
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD-E- 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~-~- 91 (264)
..|||+||||+++||.++||+|||+||++||||+++.++ ++.++|+.|++||+||+||.+|+.||.+|..+.... .
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~ 80 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK--EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGF 80 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH--HHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCC
Confidence 369999999999999999999999999999999997543 388999999999999999999999999997654210 0
Q ss_pred --hhccC-----CCCHHHHHHhhcc
Q psy18223 92 --AIFKS-----DIDWTMYWKSLYK 109 (264)
Q Consensus 92 --~~~~~-----~~~~~~~f~~~F~ 109 (264)
.++.. ..+|.++|+.||+
T Consensus 81 ~~~~~~~~~~~~~~~~~d~f~~~fg 105 (380)
T PRK14297 81 GSGGFGGFDFSDMGGFGDIFDSFFG 105 (380)
T ss_pred CCCCCCCcCcccccchhHHHHHHhc
Confidence 01110 0246788999886
No 22
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=2.8e-20 Score=176.98 Aligned_cols=181 Identities=22% Similarity=0.186 Sum_probs=112.7
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccc----cCCCCCCC
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQ----TGTLEDED 89 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~----~G~~~~~~ 89 (264)
..|||+||||+++||.++||+|||+||++||||+++.++ .+.++|+.|++||+||+||.+|+.||. +|..+...
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~ 85 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA--KAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRP 85 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch--hHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccccc
Confidence 479999999999999999999999999999999987543 388999999999999999999999998 77543221
Q ss_pred c---h--hhc--------cC----------CCCHHHHHHhhccCC-------CHHHH-----HhHHHhhcCcHH----HH
Q psy18223 90 D---E--AIF--------KS----------DIDWTMYWKSLYKDV-------TEEDI-----INYETKYKGSAE----EI 130 (264)
Q Consensus 90 ~---~--~~~--------~~----------~~~~~~~f~~~F~~v-------t~edi-----~~f~~~y~gs~e----E~ 130 (264)
+ . .++ +. ...|.++|..||+.- ...+| -.|...|.|... .+
T Consensus 86 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~r 165 (389)
T PRK14295 86 GPGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTS 165 (389)
T ss_pred CCCCCCCCCCCcccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEeec
Confidence 0 0 000 00 012445666666410 00111 134444766544 44
Q ss_pred HHHHHHHhcCCCChh-hhhhccCCCCCchHHHHHHHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHH
Q psy18223 131 NDFKRAYVQGEGDMD-LIFELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKE 199 (264)
Q Consensus 131 ~dl~~~y~~~~g~~~-~i~~~v~~~~~~d~~R~~~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e 199 (264)
..+|..|.+.+..-. .+..|..|.+.+...+.+.+++ ..-.||.|...-. ....|..|.++....+
T Consensus 166 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~---~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~ 233 (389)
T PRK14295 166 QAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFS---LSEPCPDCKGRGLIADDPCLVCKGSGRAKS 233 (389)
T ss_pred cccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceE---EEEecCCCcceeEEeccCCCCCCCCceEee
Confidence 566666666544322 1344445555443322222222 1224888884332 2346888888876544
No 23
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=8e-20 Score=173.25 Aligned_cols=182 Identities=18% Similarity=0.212 Sum_probs=115.6
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc--hh
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD--EA 92 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~--~~ 92 (264)
.|||+||||+++||.++||+|||+||++||||++++ .++.++|+.|++||+||+||.+|..||.+|......+ ..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~---~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~ 79 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD---EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGG 79 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc---HHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCC
Confidence 699999999999999999999999999999999973 2488999999999999999999999999986422110 01
Q ss_pred hcc-CCCCHHHHHHhhccCCC-----------HHHHH-----hHHHhhcCcHH----HHHHHHHHHhcCCCChh-hhhhc
Q psy18223 93 IFK-SDIDWTMYWKSLYKDVT-----------EEDII-----NYETKYKGSAE----EINDFKRAYVQGEGDMD-LIFEL 150 (264)
Q Consensus 93 ~~~-~~~~~~~~f~~~F~~vt-----------~edi~-----~f~~~y~gs~e----E~~dl~~~y~~~~g~~~-~i~~~ 150 (264)
+++ ...+|.++|..||+.-. -.+|. .|...|.|... .+..+|..|.+.+..-. .+..|
T Consensus 80 g~~~~f~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C 159 (378)
T PRK14278 80 GFGGGFGGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTC 159 (378)
T ss_pred CCCcCcCchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceec
Confidence 111 11346688998886210 01221 35555666544 34566666665544222 23345
Q ss_pred cCCCCCchHHHHHHHH-HHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHH
Q psy18223 151 VPFTHPSEEDRYRQII-QDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKE 199 (264)
Q Consensus 151 v~~~~~~d~~R~~~ii-~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e 199 (264)
..|.+.+...+.+.+. ..+...-.|+.|...-. ....|..|.++....+
T Consensus 160 ~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~ 210 (378)
T PRK14278 160 DTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRA 210 (378)
T ss_pred CCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEec
Confidence 5555544322222111 11111224788874332 2346888998876544
No 24
>KOG0691|consensus
Probab=99.80 E-value=7.6e-20 Score=167.23 Aligned_cols=94 Identities=29% Similarity=0.409 Sum_probs=82.5
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCchhh
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEAI 93 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~~~ 93 (264)
..|||.||||+.+||..+|++|||..+|+|||||||++|. |.++|+.|.+||+||+||..|..||..|-.+... .
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~--A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~--~- 78 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQ--AAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA--Q- 78 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChH--HHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc--h-
Confidence 6899999999999999999999999999999999999887 9999999999999999999999999999765431 1
Q ss_pred ccCCCCHHHHHHhhccCCCHH
Q psy18223 94 FKSDIDWTMYWKSLYKDVTEE 114 (264)
Q Consensus 94 ~~~~~~~~~~f~~~F~~vt~e 114 (264)
.-.++.++|+..|+.-..+
T Consensus 79 --~~~d~~~~~r~~f~~dl~~ 97 (296)
T KOG0691|consen 79 --GREDQADGFRKKFGSDLFE 97 (296)
T ss_pred --hhhhHHHHHHHHhhhhhhh
Confidence 2368889999998843333
No 25
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=9e-20 Score=172.39 Aligned_cols=182 Identities=20% Similarity=0.227 Sum_probs=111.8
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc---
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD--- 90 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~--- 90 (264)
..|||+||||+++||.++||+|||+||++||||+++.+ ...+.++|+.|++||+||+||.+|+.||.+|..+....
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~ 81 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN-RKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE 81 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc-hhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccccc
Confidence 46999999999999999999999999999999999743 22488999999999999999999999999997543210
Q ss_pred ---hhh-ccC-CCCH-----HHHHHhhccCC-----------CHHHHH-----hHHHhhcCcHH----HHHHHHHHHhcC
Q psy18223 91 ---EAI-FKS-DIDW-----TMYWKSLYKDV-----------TEEDII-----NYETKYKGSAE----EINDFKRAYVQG 140 (264)
Q Consensus 91 ---~~~-~~~-~~~~-----~~~f~~~F~~v-----------t~edi~-----~f~~~y~gs~e----E~~dl~~~y~~~ 140 (264)
... +.. ..+| .++|..||+.. .-.+|. .|...|.|... .+..+|..|.+.
T Consensus 82 ~~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~ 161 (369)
T PRK14282 82 TESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGT 161 (369)
T ss_pred CCCCCcccccccccccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCcc
Confidence 001 000 0012 16677777521 001111 34445666443 345555555554
Q ss_pred CCChh-hhhhccCCCCCchHHHHH----HHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHH
Q psy18223 141 EGDMD-LIFELVPFTHPSEEDRYR----QIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKE 199 (264)
Q Consensus 141 ~g~~~-~i~~~v~~~~~~d~~R~~----~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e 199 (264)
+..-. .+..|..|.+.+-....+ .+++. .-.||.|...-. ....|..|.++....+
T Consensus 162 G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~---~~~C~~C~G~G~~~~~~C~~C~G~g~v~~ 223 (369)
T PRK14282 162 GVEPGSGYVTCPKCHGTGRIREERRSFFGVFVS---ERTCERCGGTGKIPGEYCHECGGSGRIRR 223 (369)
T ss_pred CCCCCCCCcCCCCCCCcCEEEEEEEccCcceEE---EEECCCCCCcceeCCCCCCCCCCceeEEE
Confidence 43221 133344444444222111 12221 224888884433 2346888888875443
No 26
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=1.1e-19 Score=166.67 Aligned_cols=93 Identities=37% Similarity=0.547 Sum_probs=75.1
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCC---c
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDED---D 90 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~---~ 90 (264)
..|||+||||+++||.++||+|||+||++||||++++. .+.++|+.|++||+||+||.+|..||.+|..+... +
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~ 79 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSP---GAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQG 79 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---hHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccC
Confidence 36999999999999999999999999999999998732 37899999999999999999999999998753211 0
Q ss_pred h-------hhccC--CCCHHHHHHhhcc
Q psy18223 91 E-------AIFKS--DIDWTMYWKSLYK 109 (264)
Q Consensus 91 ~-------~~~~~--~~~~~~~f~~~F~ 109 (264)
. ..+.. ..+|.++|+.||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~f~~~fg 107 (291)
T PRK14299 80 PPPGPPGGGDFSGFNVGDFSDFFQQLFG 107 (291)
T ss_pred CCCCCCCCCCccccCcCCHHHHHHHHhC
Confidence 0 01111 1357788888886
No 27
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=1e-19 Score=173.01 Aligned_cols=182 Identities=21% Similarity=0.229 Sum_probs=113.1
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc---
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD--- 90 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~--- 90 (264)
..|||+||||+++||.++||+|||+||++||||+++.++ .+.++|+.|++||+||+||.+|..||.+|..+....
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~ 81 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK--EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFG 81 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch--HHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccc
Confidence 469999999999999999999999999999999997543 388999999999999999999999999986543210
Q ss_pred h-----hhccC------CCCHHHHHHhhccCC-------------CHHHH-----HhHHHhhcCcHH----HHHHHHHHH
Q psy18223 91 E-----AIFKS------DIDWTMYWKSLYKDV-------------TEEDI-----INYETKYKGSAE----EINDFKRAY 137 (264)
Q Consensus 91 ~-----~~~~~------~~~~~~~f~~~F~~v-------------t~edi-----~~f~~~y~gs~e----E~~dl~~~y 137 (264)
. .+++. ..+|.++|..||+.. .-.+| -.|...|.|... .+..+|..|
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C 161 (386)
T PRK14277 82 QGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVC 161 (386)
T ss_pred cCCcCCCCccccCccccccchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCC
Confidence 0 01100 023445666665421 00111 134444666544 445666666
Q ss_pred hcCCCChh-hhhhccCCCCCchHHHHH----HHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHHH
Q psy18223 138 VQGEGDMD-LIFELVPFTHPSEEDRYR----QIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKEE 200 (264)
Q Consensus 138 ~~~~g~~~-~i~~~v~~~~~~d~~R~~----~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e~ 200 (264)
.+.+.... .+..|..|.+.+-....+ .+++.. . .|+.|...-. ....|+.|.++....+.
T Consensus 162 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~-~--~C~~C~G~G~~~~~~C~~C~G~g~v~~~ 227 (386)
T PRK14277 162 KGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNI-R--TCDRCHGEGKIITDPCNKCGGTGRIRRR 227 (386)
T ss_pred CCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEE-E--ECCCCCcceeeccCCCCCCCCCcEEeee
Confidence 55444322 133444444444222111 122222 2 3788873322 23468899988865443
No 28
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.80 E-value=4.2e-20 Score=173.62 Aligned_cols=179 Identities=24% Similarity=0.259 Sum_probs=115.3
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch----
Q psy18223 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE---- 91 (264)
Q Consensus 16 d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~---- 91 (264)
|||+||||+++||.++||+|||+||++||||+++. ..+.++|+.|++||+||+||.+|..||.+|..+.....
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~ 77 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD---KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGG 77 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCC
Confidence 79999999999999999999999999999999972 23788999999999999999999999999876543100
Q ss_pred hhcc-----CCCCHHHHHHhhccCC------------CHHHH-----HhHHHhhcCcHH----HHHHHHHHHhcCCCChh
Q psy18223 92 AIFK-----SDIDWTMYWKSLYKDV------------TEEDI-----INYETKYKGSAE----EINDFKRAYVQGEGDMD 145 (264)
Q Consensus 92 ~~~~-----~~~~~~~~f~~~F~~v------------t~edi-----~~f~~~y~gs~e----E~~dl~~~y~~~~g~~~ 145 (264)
..+. ...+|.++|..||+.- ...+| -.|...|.|... .+..+|..|.+.++.-.
T Consensus 78 ~~~~~~~~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 157 (354)
T TIGR02349 78 GGFNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPG 157 (354)
T ss_pred CCcCCccccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCC
Confidence 0111 1135668899888621 00111 134445666444 44556665655544221
Q ss_pred h-hhhccCCCCCchHHHHHH----HHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHHH
Q psy18223 146 L-IFELVPFTHPSEEDRYRQ----IIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKEE 200 (264)
Q Consensus 146 ~-i~~~v~~~~~~d~~R~~~----ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e~ 200 (264)
. +..|..|.+.+.....+. +++. .. .|+.|...-. ....|+.|.+++...+.
T Consensus 158 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~--~C~~C~G~G~~~~~~C~~C~G~g~v~~~ 215 (354)
T TIGR02349 158 TDPKTCPTCGGTGQVRRQQGTPFGFFQQ-QQ--TCPTCGGEGKIIKEPCSTCKGKGRVKER 215 (354)
T ss_pred CCCccCCCCCCeeEEEEEEeccCCceEE-EE--ecCCCCCcceecCCCCCCCCCCcEeccc
Confidence 1 344555555543333332 3332 22 3788873322 23468889888765543
No 29
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=9.6e-20 Score=172.61 Aligned_cols=179 Identities=22% Similarity=0.248 Sum_probs=112.2
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc--h
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD--E 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~--~ 91 (264)
..|||+||||+++||.++||+|||+|+++||||+++.. .+.++|+.|++||+||+||.+|+.||.+|..+...+ .
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~---~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~ 79 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEE---GADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGG 79 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCC
Confidence 36999999999999999999999999999999998742 388999999999999999999999999997654311 0
Q ss_pred hh-----ccCCCCHHHHHHhhccCC----------CHHHH-----HhHHHhhcCcHH----HHHHHHHHHhcCCCChh-h
Q psy18223 92 AI-----FKSDIDWTMYWKSLYKDV----------TEEDI-----INYETKYKGSAE----EINDFKRAYVQGEGDMD-L 146 (264)
Q Consensus 92 ~~-----~~~~~~~~~~f~~~F~~v----------t~edi-----~~f~~~y~gs~e----E~~dl~~~y~~~~g~~~-~ 146 (264)
.. +..+.+|.++|..||+.- .-.|| -.|...|.|... .+..+|..|.+.+..-. .
T Consensus 80 ~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~ 159 (376)
T PRK14280 80 GGFGGGDFGGGFGFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTS 159 (376)
T ss_pred CCCCCCCccccccchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCC
Confidence 01 111125678899998520 00111 134444666543 34555655555443221 1
Q ss_pred hhhccCCCCCchHHHHH----HHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHH
Q psy18223 147 IFELVPFTHPSEEDRYR----QIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEK 198 (264)
Q Consensus 147 i~~~v~~~~~~d~~R~~----~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~ 198 (264)
+..|..|.+.+-....+ .+++ . .-.|+.|...-. ....|+.|.++....
T Consensus 160 ~~~C~~C~G~G~~~~~~~~~~g~~~-~--~~~C~~C~G~G~~~~~~C~~C~G~g~v~ 213 (376)
T PRK14280 160 KETCSHCGGSGQVSVEQNTPFGRVV-N--RQTCPHCNGTGQEIKEKCPTCHGKGKVR 213 (376)
T ss_pred CccCCCCCCEEEEEEEeecCCceEE-E--EEEcCCCCCCCceecCCCCCCCCceEEE
Confidence 33344444443221111 1122 1 224787874332 234578888776553
No 30
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=6e-20 Score=174.86 Aligned_cols=70 Identities=41% Similarity=0.631 Sum_probs=64.9
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGT 84 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~ 84 (264)
...|||+||||+++||.++||+|||+||++||||+++.++ .|.++|+.|++||+|||||++|+.||.+|.
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP--AAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh--HHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 4589999999999999999999999999999999997543 388999999999999999999999999875
No 31
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=3.1e-19 Score=169.44 Aligned_cols=70 Identities=46% Similarity=0.646 Sum_probs=64.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
..|||+||||+++||.++||+|||+||++||||+++. + .+.++|+.|++||+||+||.+|+.||.+|..+
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~--~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~ 71 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-P--EAEEKFKEINEAYQVLSDPEKRKLYDQFGHAA 71 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-c--cHHHHHHHHHHHHHHhcCHHHHHHHhhhcccc
Confidence 3699999999999999999999999999999999974 2 37899999999999999999999999998754
No 32
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.76 E-value=9.4e-19 Score=177.74 Aligned_cols=77 Identities=23% Similarity=0.355 Sum_probs=69.4
Q ss_pred HHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCC
Q psy18223 9 EKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDE 88 (264)
Q Consensus 9 ~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~ 88 (264)
...+..++||+||||+++||..+||+|||+||++||||+++.+ .+..+|+.|+.||+|||||.+|+.||.+|..+..
T Consensus 567 t~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~---~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 567 TIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN---EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 3456678999999999999999999999999999999999754 3788999999999999999999999999976543
No 33
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=8e-19 Score=166.46 Aligned_cols=70 Identities=47% Similarity=0.648 Sum_probs=64.9
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
..|||+||||+++||.++||+|||+||++||||++++ ..+.++|+.|++||+||+||.+|++||.+|..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g 73 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE---EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAG 73 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccc
Confidence 5799999999999999999999999999999999874 248999999999999999999999999988654
No 34
>KOG0716|consensus
Probab=99.75 E-value=5.3e-19 Score=157.80 Aligned_cols=72 Identities=47% Similarity=0.692 Sum_probs=67.0
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCC
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLED 87 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~ 87 (264)
..|+|.|||++++||.++||+|||+|++++|||+++++|. ++++|..|+.||+||+||.+|..||..|+.+.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~--~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPE--ATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCch--hHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 4579999999999999999999999999999999987654 89999999999999999999999999997654
No 35
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=2.4e-18 Score=162.96 Aligned_cols=93 Identities=26% Similarity=0.426 Sum_probs=74.4
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch--
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE-- 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~-- 91 (264)
..|||+||||+++||.++|++|||+|+++||||+++.. .+.++|+.|++||+||+||.+|+.||.+|..+.....
T Consensus 2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~ 78 (374)
T PRK14293 2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEP---GAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF 78 (374)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc---CHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCc
Confidence 36999999999999999999999999999999998742 3789999999999999999999999999875432100
Q ss_pred hhccCCCCHHHHHHhhcc
Q psy18223 92 AIFKSDIDWTMYWKSLYK 109 (264)
Q Consensus 92 ~~~~~~~~~~~~f~~~F~ 109 (264)
..+....+|.++|..||+
T Consensus 79 ~~~~~~~~~~d~f~~~fg 96 (374)
T PRK14293 79 PDMGDMGGFADIFETFFS 96 (374)
T ss_pred CCcccccchHHHHHHHhc
Confidence 011111246678888875
No 36
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=2.1e-18 Score=163.97 Aligned_cols=72 Identities=43% Similarity=0.593 Sum_probs=66.1
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCC
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLED 87 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~ 87 (264)
..|||+||||+++||.+||++|||+||++||||+++.++ ++.++|+.|+.||+||+||.+|+.||.+|..+.
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~--~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~ 75 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK--EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV 75 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCh--HHHHHHHHHHHHHHHhcCHHHHHHHHHhccccc
Confidence 479999999999999999999999999999999997543 388999999999999999999999999987543
No 37
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=2.8e-18 Score=162.37 Aligned_cols=93 Identities=37% Similarity=0.545 Sum_probs=75.0
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCC--chh
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDED--DEA 92 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~--~~~ 92 (264)
.|||+||||+++||.++||+|||+|+++||||+++.. .+.++|+.|++||+||+||.+|+.||.+|..+... ...
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~---~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~ 78 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEK---GAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGD 78 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCh---hHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCc
Confidence 4899999999999999999999999999999999732 38899999999999999999999999999754211 001
Q ss_pred hccC-CCCHHHHHHhhccC
Q psy18223 93 IFKS-DIDWTMYWKSLYKD 110 (264)
Q Consensus 93 ~~~~-~~~~~~~f~~~F~~ 110 (264)
+++. +.++.++|..||+.
T Consensus 79 ~~~~~~~d~~d~f~~~fg~ 97 (371)
T PRK14292 79 PFGGMGFDPMDIFEQLFGG 97 (371)
T ss_pred ccCccCCChHHHHHHhhCC
Confidence 1111 13566888888873
No 38
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.74 E-value=1.8e-18 Score=123.69 Aligned_cols=64 Identities=39% Similarity=0.624 Sum_probs=59.9
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhcc
Q psy18223 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYD 80 (264)
Q Consensus 16 d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD 80 (264)
|||+||||+++++.++|+++|+++++.+|||+++... ..+.+.|..|+.||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~-~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE-AEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH-HHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhh-hhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999987554 458899999999999999999999998
No 39
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=2.1e-18 Score=164.31 Aligned_cols=70 Identities=40% Similarity=0.646 Sum_probs=64.7
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
.|||+||||+++||+++||+|||+||++||||+++.++ .+.++|+.|++||+||+||.+|+.||.+|..+
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 70 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA--EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDG 70 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch--HHHHHHHHHHHHHHHhcCHHHHHHHHhccccc
Confidence 48999999999999999999999999999999997543 38899999999999999999999999998754
No 40
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.73 E-value=4.5e-18 Score=157.10 Aligned_cols=92 Identities=26% Similarity=0.380 Sum_probs=73.6
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCC----CC-
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLED----ED- 89 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~----~~- 89 (264)
.|||+||||+++||.++||+|||+|+++||||+++.. .+.++|+.|++||+||+||.+|+.||.+|.... ..
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~---~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~ 80 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP---DAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQ 80 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccccc
Confidence 6999999999999999999999999999999998632 488999999999999999999999999874211 00
Q ss_pred -ch-hh-ccCCCCHHHHHHhhcc
Q psy18223 90 -DE-AI-FKSDIDWTMYWKSLYK 109 (264)
Q Consensus 90 -~~-~~-~~~~~~~~~~f~~~F~ 109 (264)
.. .+ .....+|.++|..||+
T Consensus 81 ~~~~~~~~~~~~~~~~~f~~~~g 103 (306)
T PRK10266 81 FQHGDGQSFNAEDFDDIFSSIFG 103 (306)
T ss_pred cccCCCCCCCCCCHHHHHHHHhC
Confidence 00 00 0012468888998887
No 41
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=4.2e-18 Score=161.26 Aligned_cols=179 Identities=17% Similarity=0.215 Sum_probs=110.3
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCc----
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDD---- 90 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~---- 90 (264)
.|||+||||+++||.++||+|||+|+++||||+++. . .+.++|+.|++||+||+||.+|..||.+|..+....
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-~--~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 79 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-K--DAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRG 79 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c--CHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccC
Confidence 699999999999999999999999999999999863 2 378899999999999999999999999987543210
Q ss_pred -hh---hccCC--CCHHHHHHhhccCC---C-------HHHHH-----hHHHhhcCcHH----HHHHHHHHHhcCCCChh
Q psy18223 91 -EA---IFKSD--IDWTMYWKSLYKDV---T-------EEDII-----NYETKYKGSAE----EINDFKRAYVQGEGDMD 145 (264)
Q Consensus 91 -~~---~~~~~--~~~~~~f~~~F~~v---t-------~edi~-----~f~~~y~gs~e----E~~dl~~~y~~~~g~~~ 145 (264)
.. +++.+ ..|.++|..+|+.- . -.+|. .|...|.|... .+...|..|.+.+....
T Consensus 80 ~~g~~~~~~~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~ 159 (372)
T PRK14300 80 GGGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKG 159 (372)
T ss_pred CCCCCCccccchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCC
Confidence 00 01000 11445555554310 0 01111 34445666443 44555555555544332
Q ss_pred -hhhhccCCCCCchHHHHHHHHHHHhhcCCCCchhhhcc-hhHHHHHHHhhHHHHH
Q psy18223 146 -LIFELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLN-EAKSKRNRRKRKFEKE 199 (264)
Q Consensus 146 -~i~~~v~~~~~~d~~R~~~ii~~~i~~~~~~~~~~~~~-e~k~~k~~r~kk~~~e 199 (264)
.+..|..|.+.+-......+++ +.. .|+.|...-. ....|..|.++....+
T Consensus 160 ~~~~~C~~C~G~G~~~~~~g~~~-~~~--~C~~C~G~G~~~~~~C~~C~G~g~v~~ 212 (372)
T PRK14300 160 ETVTTCDACSGVGATRMQQGFFT-IEQ--ACHKCQGNGQIIKNPCKKCHGMGRYHK 212 (372)
T ss_pred CCCccCCCccCeEEEEEeeceEE-EEE--eCCCCCccceEeCCCCCCCCCceEEEe
Confidence 2444555555443222222332 222 3788873332 2346888888776543
No 42
>KOG0715|consensus
Probab=99.70 E-value=1.5e-17 Score=152.40 Aligned_cols=71 Identities=41% Similarity=0.565 Sum_probs=65.6
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
...|||+||||+++||..|||.||++|+++||||-+... .+.++|++|..||+||+|+++|..||..|...
T Consensus 41 ~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~---~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 41 SKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK---EASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc---chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 344999999999999999999999999999999999755 49999999999999999999999999998754
No 43
>PHA03102 Small T antigen; Reviewed
Probab=99.67 E-value=1.2e-16 Score=133.63 Aligned_cols=84 Identities=21% Similarity=0.240 Sum_probs=71.3
Q ss_pred CCcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCchh
Q psy18223 15 KDLYEVLNVDKTA--TPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEA 92 (264)
Q Consensus 15 ~d~Y~vLgv~~~a--s~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~~ 92 (264)
..+|+||||+++| |..+||+|||++++++|||+++ ..++|+.|+.||+||+|+.+|..||.+|......
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg------~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~--- 75 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG------DEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSE--- 75 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc------hhHHHHHHHHHHHHHhhHHHhccccccCCccccc---
Confidence 3589999999999 9999999999999999999976 3468999999999999999999999999765431
Q ss_pred hccCCCCHHHHHHhhccC
Q psy18223 93 IFKSDIDWTMYWKSLYKD 110 (264)
Q Consensus 93 ~~~~~~~~~~~f~~~F~~ 110 (264)
. ...|.++|..+|+.
T Consensus 76 ~---~~~~~~~f~~~fg~ 90 (153)
T PHA03102 76 E---EDVPSGYVGATFGD 90 (153)
T ss_pred c---cccHHHHhhhhcCC
Confidence 1 12377888888863
No 44
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.65 E-value=3.2e-16 Score=110.25 Aligned_cols=59 Identities=44% Similarity=0.660 Sum_probs=53.8
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhh
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~ 74 (264)
.|||+||||++++|.++|+++|+++++.+|||+++.. ...+.+.|+.|+.||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD-KEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999999999999998742 3458899999999999999985
No 45
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.63 E-value=5.3e-16 Score=154.88 Aligned_cols=90 Identities=33% Similarity=0.568 Sum_probs=74.6
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCchhhc
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEAIF 94 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~~~~ 94 (264)
.|||+||||+++|+..+||+|||+|+++||||+++. ..+..+|+.|+.||+||+||.+|..||.+|..+... .
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~---~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d~-e--- 74 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA---PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDR-E--- 74 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccccc-c---
Confidence 599999999999999999999999999999999874 237889999999999999999999999998755431 0
Q ss_pred cCCCCH-HHHHHhhccCCC
Q psy18223 95 KSDIDW-TMYWKSLYKDVT 112 (264)
Q Consensus 95 ~~~~~~-~~~f~~~F~~vt 112 (264)
.+..| .++|..||..+.
T Consensus 75 -~gf~f~~DIF~sfFeeIe 92 (871)
T TIGR03835 75 -DDFDFQADVFNSFFEEIN 92 (871)
T ss_pred -cccchhHHHHHHHhhhhh
Confidence 12333 368888887544
No 46
>PHA02624 large T antigen; Provisional
Probab=99.62 E-value=4.5e-16 Score=153.49 Aligned_cols=102 Identities=23% Similarity=0.320 Sum_probs=86.1
Q ss_pred CCcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhc--cccCCCCCCCc
Q psy18223 15 KDLYEVLNVDKTA--TPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVY--DQTGTLEDEDD 90 (264)
Q Consensus 15 ~d~Y~vLgv~~~a--s~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~Y--D~~G~~~~~~~ 90 (264)
.++|+||||+++| |..+||+|||+++++||||+++ +.++|+.|+.||++|+|+.+|..| |.+-..+
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG------deekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~---- 80 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG------DEEKMKRLNSLYKKLQEGVKSARQSFGTQDSSE---- 80 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC------cHHHHHHHHHHHHHHhcHHHhhhcccccccccC----
Confidence 5899999999999 9999999999999999999975 457899999999999999999999 4331000
Q ss_pred hhhccCCCCHHHHHHhhccCCCHHHHHhHHHhhcCcHH
Q psy18223 91 EAIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAE 128 (264)
Q Consensus 91 ~~~~~~~~~~~~~f~~~F~~vt~edi~~f~~~y~gs~e 128 (264)
. ...+..+|.++|+.||+++ .+||..|+..|..++|
T Consensus 81 v-~~~~~~~w~~ww~~f~~k~-~EDI~c~E~~y~Sd~E 116 (647)
T PHA02624 81 I-PTYGTPEWEQWWEEFNEKW-DEDLFCDEELSSSDDE 116 (647)
T ss_pred C-CCCccccHHHHHHHhhhhh-hccchhhhhccCCCcc
Confidence 1 1124579999999999998 8999999999987654
No 47
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.62 E-value=9.2e-16 Score=105.91 Aligned_cols=55 Identities=42% Similarity=0.663 Sum_probs=51.1
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhch
Q psy18223 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSD 72 (264)
Q Consensus 16 d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd 72 (264)
|||+||||++++|.++|+++|++|++.+|||+++.. ..+.+.|+.|+.||+||+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~--~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD--PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcC
Confidence 699999999999999999999999999999999753 3489999999999999986
No 48
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=1.2e-15 Score=130.34 Aligned_cols=70 Identities=47% Similarity=0.671 Sum_probs=64.5
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTG 83 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G 83 (264)
...+||+||||+++||..+|++|||+++++||||+++.++. .+.+.|+.|+.||.||+|+.+|..||..+
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~-~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPK-VAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 34699999999999999999999999999999999986654 58899999999999999999999999863
No 49
>KOG0721|consensus
Probab=99.58 E-value=2.1e-15 Score=131.02 Aligned_cols=73 Identities=30% Similarity=0.510 Sum_probs=65.8
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLED 87 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~ 87 (264)
..-|||+||||++++|..|||+|||+|+++|||||++.. ....+.|..|.+||+.|+|+..|..|..+|..+.
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~--~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE--EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc--chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 446999999999999999999999999999999998753 3478889999999999999999999999997554
No 50
>KOG0624|consensus
Probab=99.50 E-value=2e-14 Score=133.06 Aligned_cols=74 Identities=35% Similarity=0.578 Sum_probs=66.9
Q ss_pred HHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh-hhHHHHHHHHHHHHHHHhhchhhhhhhcccc
Q psy18223 9 EKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEE-DKEVATEKFKILGLVHSILSDVEKRKVYDQT 82 (264)
Q Consensus 9 ~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~-~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~ 82 (264)
.+..+.+|||+||||.++|+..||.+|||++|.+||||-..+. ++..|..+|--|..|-+||+||++|+.||..
T Consensus 388 kkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG 462 (504)
T KOG0624|consen 388 KKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG 462 (504)
T ss_pred HHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence 3455779999999999999999999999999999999998644 3667999999999999999999999999974
No 51
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.48 E-value=4.6e-14 Score=119.83 Aligned_cols=67 Identities=21% Similarity=0.321 Sum_probs=58.7
Q ss_pred CCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCh-hhHHHHHHHHHHHHHHHhhchhhhhhhccc
Q psy18223 15 KDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEE-DKEVATEKFKILGLVHSILSDVEKRKVYDQ 81 (264)
Q Consensus 15 ~d~Y~vLgv~~~--as~~eIkkaYrkl~l~~HPDk~~~~-~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~ 81 (264)
.|||+||||++. ++..+|+++|+++++++|||++... .+..+.+.|..|++||+||+||.+|+.|+-
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL 71 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML 71 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 589999999996 7899999999999999999998532 334456779999999999999999999974
No 52
>KOG0550|consensus
Probab=99.48 E-value=3.5e-14 Score=133.61 Aligned_cols=97 Identities=34% Similarity=0.476 Sum_probs=79.9
Q ss_pred HHHHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 7 LCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 7 ~~~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
+.-+.-+..|||.||||+++||..+|++|||+++|.||||++... +.++..+|..|..||.||+||.+|..||+.-...
T Consensus 365 ~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ags-q~eaE~kFkevgeAy~il~d~~kr~r~dsg~dle 443 (486)
T KOG0550|consen 365 LALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGS-QKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDLE 443 (486)
T ss_pred HHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcch-hHHHHHHHHHHHHHHHHhcCHHHHhhcccccchh
Confidence 334455678999999999999999999999999999999999755 4568999999999999999999999999765444
Q ss_pred CCCchhhccCCCCHHHHHHhh
Q psy18223 87 DEDDEAIFKSDIDWTMYWKSL 107 (264)
Q Consensus 87 ~~~~~~~~~~~~~~~~~f~~~ 107 (264)
+.+ .++ .+.+++++|+.+
T Consensus 444 ~~~--~~~-a~~dp~~~~~a~ 461 (486)
T KOG0550|consen 444 EVG--SGG-AGFDPFNIFRAF 461 (486)
T ss_pred hhc--CCC-cCcChhhhhhhc
Confidence 432 112 567888888876
No 53
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.47 E-value=6.6e-14 Score=119.42 Aligned_cols=67 Identities=15% Similarity=0.265 Sum_probs=58.8
Q ss_pred CCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCh---hhHHHHHHHHHHHHHHHhhchhhhhhhccc
Q psy18223 15 KDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEE---DKEVATEKFKILGLVHSILSDVEKRKVYDQ 81 (264)
Q Consensus 15 ~d~Y~vLgv~~~--as~~eIkkaYrkl~l~~HPDk~~~~---~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~ 81 (264)
.|||+||||++. ++..+|+++||++++++|||+.+.. .+..+.+.|..|+.||+||+||.+|+.|+-
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999995 7889999999999999999997532 233477899999999999999999999984
No 54
>KOG0722|consensus
Probab=99.43 E-value=5.4e-14 Score=124.89 Aligned_cols=71 Identities=31% Similarity=0.476 Sum_probs=64.9
Q ss_pred HhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccC
Q psy18223 10 KYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTG 83 (264)
Q Consensus 10 ~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G 83 (264)
-+++..|.|+||||+++++..+|.+|||+||++||||++++.+ ..+.|..|..||++|.|...|..||-.-
T Consensus 28 LYCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e---~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 28 LYCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPE---SKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred hcccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCch---hhhhhhhhhcccccccchhhHHhHHHHh
Confidence 4668899999999999999999999999999999999997554 5689999999999999999999999643
No 55
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.42 E-value=2.9e-13 Score=115.62 Aligned_cols=69 Identities=20% Similarity=0.324 Sum_probs=60.8
Q ss_pred CCCCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCh---hhHHHHHHHHHHHHHHHhhchhhhhhhccc
Q psy18223 13 KTKDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEE---DKEVATEKFKILGLVHSILSDVEKRKVYDQ 81 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~--as~~eIkkaYrkl~l~~HPDk~~~~---~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~ 81 (264)
++.|||++|||++. .+..+|+++||+|++++|||+++.. ++..+.+.|..|+.||.||+||.+|+.|+-
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 46899999999996 6789999999999999999998533 234577889999999999999999999985
No 56
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.40 E-value=4.1e-13 Score=115.01 Aligned_cols=71 Identities=23% Similarity=0.296 Sum_probs=60.3
Q ss_pred CCCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCh---hhHHHHHHHHHHHHHHHhhchhhhhhhccc--cCC
Q psy18223 14 TKDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEE---DKEVATEKFKILGLVHSILSDVEKRKVYDQ--TGT 84 (264)
Q Consensus 14 ~~d~Y~vLgv~~~--as~~eIkkaYrkl~l~~HPDk~~~~---~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~--~G~ 84 (264)
..|||+||||++. ++..+|+++|++|++++|||+++.. .+..+.+.+..|+.||.+|+||.+|+.|+. .|.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G~ 82 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRGV 82 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcCC
Confidence 3799999999995 6899999999999999999998532 233456778999999999999999999984 554
No 57
>KOG0720|consensus
Probab=99.40 E-value=2.7e-13 Score=128.73 Aligned_cols=71 Identities=28% Similarity=0.445 Sum_probs=64.1
Q ss_pred HhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccC
Q psy18223 10 KYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTG 83 (264)
Q Consensus 10 ~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G 83 (264)
+..+..|+|.||||+.++|+++||+.||++|...|||||. .+ .|.+.|+.|+.||+||+|+++|..||..-
T Consensus 230 re~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~--~A~Eafk~Lq~Afevig~~~kR~eYd~e~ 300 (490)
T KOG0720|consen 230 RELNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IP--RAEEAFKKLQVAFEVIGDSVKRKEYDLEL 300 (490)
T ss_pred hhhcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-Ch--hHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 3445789999999999999999999999999999999997 33 39999999999999999999999999643
No 58
>KOG0714|consensus
Probab=99.39 E-value=2.6e-13 Score=121.35 Aligned_cols=70 Identities=46% Similarity=0.720 Sum_probs=65.1
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCC
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGT 84 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~ 84 (264)
..|||.||||.++|+..+|++||++++++||||+++.. +..+..+|.+|.+||+||+||.+|..||..|.
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~-~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSP-KEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCc-hhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 46999999999999999999999999999999998866 55676799999999999999999999999997
No 59
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.28 E-value=4.1e-12 Score=101.47 Aligned_cols=51 Identities=31% Similarity=0.415 Sum_probs=46.9
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhc
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILS 71 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLs 71 (264)
.++|+||||++++|.++|+++||+|++++|||+.+ ....|+.|++||++|.
T Consensus 65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG------s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGG------STYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC------CHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999864 4568999999999995
No 60
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.26 E-value=5.7e-12 Score=114.55 Aligned_cols=58 Identities=29% Similarity=0.480 Sum_probs=51.7
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC-----hhhHHHHHHHHHHHHHHHhhch
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTE-----EDKEVATEKFKILGLVHSILSD 72 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~-----~~~~~a~~~F~~i~~Ay~iLsd 72 (264)
.++|+||||++++|.++||+|||+|+++||||+... +..+.++++|+.|+.||++|+.
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999632 2235689999999999999985
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.16 E-value=3.8e-11 Score=114.05 Aligned_cols=77 Identities=30% Similarity=0.517 Sum_probs=69.2
Q ss_pred hcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC---hhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCC
Q psy18223 11 YYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTE---EDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLED 87 (264)
Q Consensus 11 ~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~---~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~ 87 (264)
+..--|+|||||++.++|..+||++||+|+.++||||.+. +.+.+-.+.+..|++||..|+|...|..|=.+|..+.
T Consensus 94 ~~~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~ 173 (610)
T COG5407 94 YRRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDS 173 (610)
T ss_pred HHcCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCC
Confidence 3444699999999999999999999999999999999865 6677899999999999999999999999999986543
No 62
>KOG1150|consensus
Probab=99.09 E-value=9.1e-11 Score=101.14 Aligned_cols=73 Identities=34% Similarity=0.573 Sum_probs=63.1
Q ss_pred hhhHHHHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhh
Q psy18223 4 LLQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKV 78 (264)
Q Consensus 4 l~~~~~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~ 78 (264)
|+.....||+ .|+|+||.+.++.+.++||+.||+|++..|||+|+++ .+.|...|-.|.+||.+|-|+.-|..
T Consensus 43 llrpgstyfn-LNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd-~~rAqkAFdivkKA~k~l~n~~~rkr 115 (250)
T KOG1150|consen 43 LLRPGSTYFN-LNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDD-AERAQKAFDIVKKAYKLLENDKIRKR 115 (250)
T ss_pred HhcCCccccc-cChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCccc-HHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 4444556675 7999999999999999999999999999999999855 44599999999999999999986653
No 63
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.05 E-value=3.2e-10 Score=96.91 Aligned_cols=66 Identities=15% Similarity=0.237 Sum_probs=58.2
Q ss_pred CCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCC---hhhHHHHHHHHHHHHHHHhhchhhhhhhcc
Q psy18223 15 KDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTE---EDKEVATEKFKILGLVHSILSDVEKRKVYD 80 (264)
Q Consensus 15 ~d~Y~vLgv~~~--as~~eIkkaYrkl~l~~HPDk~~~---~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD 80 (264)
.|||++|||++. .+...+++.|+.|...+|||+... .++..+.+.-..||.||.+|+||-+|+.|=
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YL 72 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAI 72 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHH
Confidence 589999999995 899999999999999999999743 234557778999999999999999999994
No 64
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.91 E-value=2e-09 Score=90.72 Aligned_cols=56 Identities=18% Similarity=0.232 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCCCh---hhHHHHHHHHHHHHHHHhhchhhhhhhcccc
Q psy18223 27 ATPEQIRKAFYKLSLVVHPDRVTEE---DKEVATEKFKILGLVHSILSDVEKRKVYDQT 82 (264)
Q Consensus 27 as~~eIkkaYrkl~l~~HPDk~~~~---~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~ 82 (264)
.+..+|+++|+++++++|||+.+.. .+..+.+.|..|+.||.+|+||.+|+.|+-.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~ 61 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS 61 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 4678999999999999999996432 3445788999999999999999999999853
No 65
>KOG0568|consensus
Probab=98.10 E-value=2.4e-06 Score=75.62 Aligned_cols=56 Identities=27% Similarity=0.510 Sum_probs=50.0
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHH-hhchh
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHS-ILSDV 73 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~-iLsd~ 73 (264)
..+|.||||...|+.++++.||..|+.++|||..++. ...+.|++|.+||. ||+..
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~---adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEE---ADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCcc---ccHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998743 36789999999999 88754
No 66
>KOG1789|consensus
Probab=98.09 E-value=3.9e-06 Score=87.04 Aligned_cols=52 Identities=37% Similarity=0.570 Sum_probs=44.8
Q ss_pred CcccccccCCC----CCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhch
Q psy18223 16 DLYEVLNVDKT----ATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSD 72 (264)
Q Consensus 16 d~Y~vLgv~~~----as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd 72 (264)
+-|+||.|+-+ -..+.||++|++|+.+|||||||+ ..++|..|++||+.|+.
T Consensus 1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE-----GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE-----GREMFERVNKAYELLSS 1337 (2235)
T ss_pred HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch-----HHHHHHHHHHHHHHHHH
Confidence 56999998862 234789999999999999999984 57899999999999994
No 67
>KOG0723|consensus
Probab=97.74 E-value=5.2e-05 Score=59.47 Aligned_cols=49 Identities=20% Similarity=0.299 Sum_probs=42.2
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchh
Q psy18223 19 EVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDV 73 (264)
Q Consensus 19 ~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~ 73 (264)
.||||+++++.+.||.|+|++.+..|||+.+.. -.-..|++|+++|...
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP------YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP------YLASKINEAKDLLEGT 108 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH------HHHHHHHHHHHHHhcc
Confidence 489999999999999999999999999998732 3345799999999753
No 68
>KOG3192|consensus
Probab=96.47 E-value=0.0029 Score=53.07 Aligned_cols=68 Identities=21% Similarity=0.393 Sum_probs=53.5
Q ss_pred CCCCcccccccCC--CCCHHHHHHHHHHHHHhhCCCCCC---ChhhHHHHHHHHHHHHHHHhhchhhhhhhcc
Q psy18223 13 KTKDLYEVLNVDK--TATPEQIRKAFYKLSLVVHPDRVT---EEDKEVATEKFKILGLVHSILSDVEKRKVYD 80 (264)
Q Consensus 13 ~~~d~Y~vLgv~~--~as~~eIkkaYrkl~l~~HPDk~~---~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD 80 (264)
...+||.++|... ...+.-+..-|.-.+.+.|||+.. ......|.+....|++||..|.||-.|+.|=
T Consensus 6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yi 78 (168)
T KOG3192|consen 6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYL 78 (168)
T ss_pred hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3468999998655 445666666899999999999952 1122358888999999999999999999995
No 69
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.98 E-value=0.0053 Score=52.43 Aligned_cols=56 Identities=29% Similarity=0.350 Sum_probs=47.3
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh-----hhHHHHHHHHHHHHHHHhh
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEE-----DKEVATEKFKILGLVHSIL 70 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~-----~~~~a~~~F~~i~~Ay~iL 70 (264)
.+.|.+|||...+...+|+++|+++.-.+|||+.... --..+.++++.|+.||+-+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999995311 1245788899999999743
No 70
>KOG0431|consensus
Probab=95.77 E-value=0.017 Score=56.52 Aligned_cols=48 Identities=31% Similarity=0.525 Sum_probs=34.0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhCCCCCCChh-----hHHHHHHHHHHHHHHHh
Q psy18223 22 NVDKTATPEQIRKAFYKLSLVVHPDRVTEED-----KEVATEKFKILGLVHSI 69 (264)
Q Consensus 22 gv~~~as~~eIkkaYrkl~l~~HPDk~~~~~-----~~~a~~~F~~i~~Ay~i 69 (264)
++..-.++.+||++|||.+|.+||||..+.+ +--+.+.|-.+++||..
T Consensus 395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~ 447 (453)
T KOG0431|consen 395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK 447 (453)
T ss_pred chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 4445579999999999999999999985431 22344556666666553
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.39 E-value=0.014 Score=49.91 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=51.5
Q ss_pred CcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCh---hhHHHHHHHHHHHHHHHhhchhhhhhhcccc
Q psy18223 16 DLYEVLNVDKTA--TPEQIRKAFYKLSLVVHPDRVTEE---DKEVATEKFKILGLVHSILSDVEKRKVYDQT 82 (264)
Q Consensus 16 d~Y~vLgv~~~a--s~~eIkkaYrkl~l~~HPDk~~~~---~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~ 82 (264)
+++-.+|.++.+ ..+.+...|+.+...+|||+.... +...+.+.+..++.||.+|.||-.|..|=..
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~la 73 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLA 73 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 345556666644 345688999999999999997422 3344678899999999999999999999653
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=92.92 E-value=0.22 Score=40.67 Aligned_cols=51 Identities=18% Similarity=0.125 Sum_probs=37.4
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhh
Q psy18223 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74 (264)
Q Consensus 18 Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~ 74 (264)
..||||++..+.++|.+.|.+|-...+|++.+ ..-.=..|..|.+.|...-
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGG------SfYLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKGG------SFYLQSKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcCC------CHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999886 3444556888888887554
No 73
>KOG0724|consensus
Probab=89.92 E-value=0.31 Score=45.49 Aligned_cols=60 Identities=25% Similarity=0.367 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCCC--hhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 27 ATPEQIRKAFYKLSLVVHPDRVTE--EDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 27 as~~eIkkaYrkl~l~~HPDk~~~--~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
++..+|+.+|+..++.+||++... .......+.|++|.+||.||++..+|..+|++-.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~~~~ 65 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWDKFA 65 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhhhHHH
Confidence 577889999999999999998741 112235677999999999999977777888776443
No 74
>PF13446 RPT: A repeated domain in UCH-protein
Probab=79.82 E-value=5.2 Score=27.92 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=23.5
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHH
Q psy18223 16 DLYEVLNVDKTATPEQIRKAFYKLSL 41 (264)
Q Consensus 16 d~Y~vLgv~~~as~~eIkkaYrkl~l 41 (264)
.=|++|||+++.+.+.|-.+|.....
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 34899999999999999999998877
No 75
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=76.44 E-value=6 Score=31.50 Aligned_cols=50 Identities=24% Similarity=0.406 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCh--hhHHHHHHHHHHHHHHHhhchhh
Q psy18223 25 KTATPEQIRKAFYKLSLVVHPDRVTEE--DKEVATEKFKILGLVHSILSDVE 74 (264)
Q Consensus 25 ~~as~~eIkkaYrkl~l~~HPDk~~~~--~~~~a~~~F~~i~~Ay~iLsd~~ 74 (264)
+..+..+++.|.|.+-++.|||..... .+....+-++.|+.-.+.|..+.
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence 345678899999999999999976433 34456677888888888877654
No 76
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=47.89 E-value=45 Score=24.79 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=28.1
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVT 49 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~ 49 (264)
++|.-+++|+.+-||+.||+.|-++.++++.--..|
T Consensus 2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~P 37 (88)
T COG5552 2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHP 37 (88)
T ss_pred ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCc
Confidence 456677899999999999999988877777444433
No 77
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=47.88 E-value=23 Score=30.87 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=29.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhc
Q psy18223 24 DKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILS 71 (264)
Q Consensus 24 ~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLs 71 (264)
+++||.+||..|+.++..+|--|. ..-..|-.||+.+.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~----------~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDE----------KSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHHH
Confidence 579999999999999999993332 23455888888654
No 78
>PRK14102 nifW nitrogenase stabilizing/protective protein; Provisional
Probab=44.38 E-value=65 Score=25.44 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=43.0
Q ss_pred CcchhhHHHHhcCCCCcccccccCCCCCHH-----HHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHh
Q psy18223 1 MKGLLQLCEKYYKTKDLYEVLNVDKTATPE-----QIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSI 69 (264)
Q Consensus 1 ~m~l~~~~~~~~~~~d~Y~vLgv~~~as~~-----eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~i 69 (264)
|+++++.-.+.-..-+|+..|||+-+...- .|-+.|.......+.+-...++.+.....=..+.+||+.
T Consensus 1 m~~~l~~l~~LssAEdFf~ff~v~YDp~vvnV~RLHILkrf~qyl~~~~~~~~~~~e~~~~~~yr~~L~~AY~d 74 (105)
T PRK14102 1 MTKTLKEFKKLVDAEDYFQFFELPYDPTVVNVNRLHILKQFSQLIAEIDANFPDLSEEEKLEKYQLALEEAYQV 74 (105)
T ss_pred CchHHHHHHHhccHHHHHHHhCCCCCcchhhHHHHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 678888888888889999999999865443 466677776665443322212221122333445666664
No 79
>PF14117 DUF4287: Domain of unknown function (DUF4287)
Probab=29.89 E-value=34 Score=24.28 Aligned_cols=15 Identities=33% Similarity=0.341 Sum_probs=12.5
Q ss_pred hhhHHHHHHHhccCc
Q psy18223 244 FIGGIANLEAKYELT 258 (264)
Q Consensus 244 ~~~~~~~le~ky~~~ 258 (264)
+-++|++||+|||++
T Consensus 2 ~~sy~~~Ie~kTGk~ 16 (61)
T PF14117_consen 2 FQSYLPNIEKKTGKT 16 (61)
T ss_pred HHHHHhHhHHHHCcC
Confidence 468999999999874
No 80
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=26.63 E-value=38 Score=16.76 Aligned_cols=13 Identities=31% Similarity=0.243 Sum_probs=9.5
Q ss_pred HHHHHHHHHHhhc
Q psy18223 59 KFKILGLVHSILS 71 (264)
Q Consensus 59 ~F~~i~~Ay~iLs 71 (264)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4777888888764
No 81
>PF03206 NifW: Nitrogen fixation protein NifW; InterPro: IPR004893 Nitrogenase is a complex metalloenzyme composed of two proteins designated the Fe-protein and the MoFe-protein. Apart from these two proteins, a number of accessory proteins are essential for the maturation and assembly of nitrogenase. Even though experimental evidence suggests that these accessory proteins are required for nitrogenase activity, the exact roles played by many of these proteins in the functions of nitrogenase are unclear []. Using yeast two-hybrid screening it has been shown that NifW can interact with itself as well as NifZ. ; GO: 0009399 nitrogen fixation
Probab=26.40 E-value=1.7e+02 Score=22.99 Aligned_cols=67 Identities=13% Similarity=0.079 Sum_probs=43.3
Q ss_pred chhhHHHHhcCCCCcccccccCCCCC-----HHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhh
Q psy18223 3 GLLQLCEKYYKTKDLYEVLNVDKTAT-----PEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSIL 70 (264)
Q Consensus 3 ~l~~~~~~~~~~~d~Y~vLgv~~~as-----~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iL 70 (264)
++++...+.-..-+|++.|||+-+.. -=.|-+.|.......++.... .+.+.....=..+..||+..
T Consensus 3 ~~l~~l~~L~sAEdFf~fF~V~YDp~vv~V~RLHILkrF~~yL~~~~~~~~~-~e~~~~~~~R~~L~~AY~dF 74 (105)
T PF03206_consen 3 DILEELKKLSSAEDFFDFFGVPYDPKVVNVNRLHILKRFGQYLRAADFAPGL-SEEEDWAAYRRALERAYQDF 74 (105)
T ss_pred HHHHHHHhccCHHHHHHHhCCCcchhHHHHhhHHHHHHHHHHHHhccCCCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 37787888888889999999998654 345778888888887764221 22212223334456677643
No 82
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=25.48 E-value=77 Score=18.94 Aligned_cols=17 Identities=24% Similarity=0.276 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHhhCC
Q psy18223 29 PEQIRKAFYKLSLVVHP 45 (264)
Q Consensus 29 ~~eIkkaYrkl~l~~HP 45 (264)
.++.+.+.|+.+|.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 47789999999999993
No 83
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=23.24 E-value=1.4e+02 Score=22.96 Aligned_cols=45 Identities=16% Similarity=0.176 Sum_probs=38.6
Q ss_pred chhhHHHHhcCC-CCcccccccCCCCCHHHHHHHHHHHHHhhCCCC
Q psy18223 3 GLLQLCEKYYKT-KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDR 47 (264)
Q Consensus 3 ~l~~~~~~~~~~-~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk 47 (264)
++++.+...++. .+.+..+++.++.+.+++....++.....+++.
T Consensus 13 g~~~~~~~i~G~~~~~i~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 58 (116)
T PF03610_consen 13 GLLESAEMILGEDQDNIEAVDLYPDESIEDFEEKLEEAIEELDEGD 58 (116)
T ss_dssp HHHHHHHHHHTSTCSSEEEEEETTTSCHHHHHHHHHHHHHHCCTTS
T ss_pred HHHHHHHHHcCCCcccEEEEECcCCCCHHHHHHHHHHHHHhccCCC
Confidence 467788888998 778999999999999999999999888887655
No 84
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=22.98 E-value=2.7e+02 Score=20.74 Aligned_cols=36 Identities=25% Similarity=0.237 Sum_probs=28.5
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVT 49 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~ 49 (264)
++|.-.+.|+.+-||.+||..|=.+.+++..--..+
T Consensus 2 CRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~P 37 (78)
T PF10041_consen 2 CRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKP 37 (78)
T ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCc
Confidence 345556778999999999999999999888655544
No 85
>PF10384 Scm3: Centromere protein Scm3; InterPro: IPR018465 The centromere protein Scm3 is a non-histone component of centromeric chromatin that binds to CenH3-H4 histones, which are required for kinetochore assembly. Scm3 is required for Cse4 localisation and is required for its centromeric association [, ]. The histone H3 variant Cse4 replaces conventional histone H3 in centromeric chromatin and helps direct the assembly of the kinetochore. In addition, Scm3 has been shown in Saccharomyces cerevisiae (Baker's yeast) to be required for G2/M progression []. Scm3 is required to maintain kinetochore function throughout the cell cycle. Scm3 contains a nuclear export signal (NES). The N-terminal region of Scm3 is well conserved and functions as the CenH3-interacting domain, while the C-terminal region is variable in size and sometimes consists of DNA binding motifs [].; GO: 0005634 nucleus; PDB: 3R45_C 2YFV_C 2L5A_A.
Probab=21.12 E-value=1.7e+02 Score=20.56 Aligned_cols=16 Identities=19% Similarity=0.235 Sum_probs=13.9
Q ss_pred chhhHHHHHHHhccCc
Q psy18223 243 GFIGGIANLEAKYELT 258 (264)
Q Consensus 243 ~~~~~~~~le~ky~~~ 258 (264)
.|-+.+.+|-+||+.+
T Consensus 13 r~k~~~e~I~~KY~~~ 28 (58)
T PF10384_consen 13 RFKSRWESIIEKYGQP 28 (58)
T ss_dssp HHHHHHHHHHHHHCSG
T ss_pred HHHHHHHHHHHHhcCc
Confidence 3889999999999875
No 86
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=21.06 E-value=2.2e+02 Score=18.79 Aligned_cols=41 Identities=27% Similarity=0.225 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhcc
Q psy18223 33 RKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYD 80 (264)
Q Consensus 33 kkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD 80 (264)
...++...+.-||+.. ..+....|...|..|++.++....+
T Consensus 12 ~~~~~~~~~~~~~~~~-------~~~i~~~~~~~W~~l~~~~k~~y~~ 52 (66)
T cd00084 12 SQEHRAEVKAENPGLS-------VGEISKILGEMWKSLSEEEKKKYEE 52 (66)
T ss_pred HHHHHHHHHHHCcCCC-------HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3556677777888843 4667889999999999877655544
No 87
>KOG3442|consensus
Probab=20.48 E-value=1.6e+02 Score=24.05 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=28.1
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhCCCCCC
Q psy18223 19 EVLNVDKTATPEQIRKAFYKLSLVVHPDRVT 49 (264)
Q Consensus 19 ~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~ 49 (264)
.||+|+...+.++|-+.|-.|-....|.+.+
T Consensus 63 qILnV~~~ln~eei~k~yehLFevNdkskGG 93 (132)
T KOG3442|consen 63 QILNVKEPLNREEIEKRYEHLFEVNDKSKGG 93 (132)
T ss_pred hHhCCCCCCCHHHHHHHHHHHHhccCcccCc
Confidence 6999999999999999999999988888764
Done!