Query psy18223
Match_columns 264
No_of_seqs 279 out of 2204
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 16:51:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18223.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18223hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bq0_A DNAJ, HSP40; chaperone, 99.9 2.2E-22 7.6E-27 156.5 5.6 94 14-109 2-98 (103)
2 2qsa_A DNAJ homolog DNJ-2; J-d 99.9 1.2E-22 4.2E-27 159.5 2.7 97 9-112 9-108 (109)
3 2dn9_A DNAJ homolog subfamily 99.8 2.8E-21 9.4E-26 143.1 7.1 72 13-86 5-76 (79)
4 2ctw_A DNAJ homolog subfamily 99.8 1E-21 3.5E-26 154.4 5.0 89 13-105 15-103 (109)
5 2och_A Hypothetical protein DN 99.8 3E-21 1E-25 141.0 6.0 69 11-84 4-72 (73)
6 1hdj_A Human HSP40, HDJ-1; mol 99.8 4.2E-21 1.4E-25 141.6 6.7 71 14-87 2-72 (77)
7 2ej7_A HCG3 gene; HCG3 protein 99.8 4.8E-21 1.6E-25 142.8 7.0 73 13-86 7-79 (82)
8 2ctp_A DNAJ homolog subfamily 99.8 8E-21 2.7E-25 140.4 6.6 71 13-86 5-75 (78)
9 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.5E-20 5E-25 142.2 6.8 71 13-86 15-85 (88)
10 2dmx_A DNAJ homolog subfamily 99.8 9.4E-21 3.2E-25 144.3 5.3 75 13-88 7-81 (92)
11 2ctr_A DNAJ homolog subfamily 99.8 2.9E-20 9.8E-25 140.6 6.4 71 13-86 5-75 (88)
12 1wjz_A 1700030A21RIK protein; 99.8 2E-20 6.9E-25 142.7 5.3 74 11-84 12-89 (94)
13 2ctq_A DNAJ homolog subfamily 99.8 2E-20 6.8E-25 147.7 5.1 73 12-86 17-89 (112)
14 2lgw_A DNAJ homolog subfamily 99.8 1.6E-20 5.6E-25 145.3 4.5 73 15-88 2-74 (99)
15 2yua_A Williams-beuren syndrom 99.8 3.8E-20 1.3E-24 143.0 6.0 71 12-84 14-84 (99)
16 3bvo_A CO-chaperone protein HS 99.8 1.5E-19 5E-24 157.2 9.9 133 14-151 42-187 (207)
17 2o37_A Protein SIS1; HSP40, J- 99.8 4.4E-20 1.5E-24 140.8 5.0 70 11-85 4-73 (92)
18 1gh6_A Large T antigen; tumor 99.8 3.5E-20 1.2E-24 147.0 3.4 84 15-105 8-93 (114)
19 3apq_A DNAJ homolog subfamily 99.8 1.2E-19 4E-24 155.7 6.6 90 15-109 2-91 (210)
20 2ys8_A RAB-related GTP-binding 99.8 5.5E-19 1.9E-23 134.3 6.8 69 7-78 19-87 (90)
21 2l6l_A DNAJ homolog subfamily 99.7 8.7E-19 3E-23 145.5 4.9 72 12-83 7-82 (155)
22 3lz8_A Putative chaperone DNAJ 99.7 2.2E-19 7.5E-24 166.1 0.0 69 13-84 26-94 (329)
23 3hho_A CO-chaperone protein HS 99.7 6.5E-18 2.2E-22 143.1 5.4 69 14-82 3-76 (174)
24 1faf_A Large T antigen; J doma 99.7 6.9E-18 2.4E-22 125.3 4.8 63 15-84 11-75 (79)
25 1n4c_A Auxilin; four helix bun 99.7 9.2E-18 3.2E-22 142.9 5.4 71 9-79 111-182 (182)
26 2pf4_E Small T antigen; PP2A, 99.7 2E-18 6.9E-23 146.1 0.7 65 15-85 11-77 (174)
27 1fpo_A HSC20, chaperone protei 99.7 1.4E-17 4.9E-22 140.7 4.6 68 16-83 2-74 (171)
28 2qwo_B Putative tyrosine-prote 99.7 1.6E-17 5.6E-22 126.8 4.3 64 9-72 27-91 (92)
29 1iur_A KIAA0730 protein; DNAJ 99.7 1.8E-17 6.1E-22 125.6 4.2 64 13-77 14-77 (88)
30 3ag7_A Putative uncharacterize 99.7 1.6E-17 5.3E-22 130.1 3.5 68 6-74 32-104 (106)
31 2guz_A Mitochondrial import in 99.6 2.2E-16 7.6E-21 114.8 3.5 56 15-76 14-70 (71)
32 3apo_A DNAJ homolog subfamily 99.6 5.9E-17 2E-21 163.3 -0.5 76 11-88 17-92 (780)
33 3uo3_A J-type CO-chaperone JAC 99.6 3.8E-16 1.3E-20 133.1 3.8 66 12-82 8-80 (181)
34 2y4t_A DNAJ homolog subfamily 99.1 3.4E-11 1.2E-15 109.9 5.9 69 13-81 380-449 (450)
35 2guz_B Mitochondrial import in 98.8 3.9E-09 1.3E-13 75.2 4.1 51 17-73 6-59 (65)
36 2pzi_A Probable serine/threoni 86.9 0.47 1.6E-05 46.6 4.2 50 10-69 624-675 (681)
37 1zl8_A LIN-7; heterodimer, alp 35.3 29 0.00098 22.9 2.7 23 157-179 7-29 (53)
38 4a3n_A Transcription factor SO 20.8 1.4E+02 0.0049 19.5 4.4 41 33-80 14-54 (71)
No 1
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.86 E-value=2.2e-22 Score=156.54 Aligned_cols=94 Identities=34% Similarity=0.536 Sum_probs=67.2
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCch--
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE-- 91 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~-- 91 (264)
..|||+||||+++||.++||+|||+|+++||||+++..+ .+.+.|+.|++||+||+||.+|..||..|..+...+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~--~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~ 79 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK--EAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMG 79 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTC--THHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC--
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcH--HHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcC
Confidence 469999999999999999999999999999999997543 3789999999999999999999999999986654211
Q ss_pred -hhccCCCCHHHHHHhhcc
Q psy18223 92 -AIFKSDIDWTMYWKSLYK 109 (264)
Q Consensus 92 -~~~~~~~~~~~~f~~~F~ 109 (264)
..++...++.++|..+|+
T Consensus 80 ~~~~~~~~~~~~~f~~~f~ 98 (103)
T 1bq0_A 80 GGGFGGGADFSDIFGDVFG 98 (103)
T ss_dssp -------------------
T ss_pred CCCCCCCCCHHHHHHHHHH
Confidence 111111244556666654
No 2
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.85 E-value=1.2e-22 Score=159.45 Aligned_cols=97 Identities=28% Similarity=0.448 Sum_probs=78.4
Q ss_pred HHhcCCCCcccccccCCCC-CHHHHHHHHHHHHHhhCCCCCCC-hhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 9 EKYYKTKDLYEVLNVDKTA-TPEQIRKAFYKLSLVVHPDRVTE-EDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 9 ~~~~~~~d~Y~vLgv~~~a-s~~eIkkaYrkl~l~~HPDk~~~-~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
.-.+...|||+||||+++| |.++||+|||+|++++|||+++. .....+.+.|+.|+.||+||+||.+|..||..|...
T Consensus 9 ~~~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~ 88 (109)
T 2qsa_A 9 ELYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHP 88 (109)
T ss_dssp TSTTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT
T ss_pred HHHcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCc
Confidence 3455678999999999999 99999999999999999999974 344568999999999999999999999999987533
Q ss_pred CCCchhhccCCCCHHHHHHhhcc-CCC
Q psy18223 87 DEDDEAIFKSDIDWTMYWKSLYK-DVT 112 (264)
Q Consensus 87 ~~~~~~~~~~~~~~~~~f~~~F~-~vt 112 (264)
.. . ..+|+++|+.+|+ .|+
T Consensus 89 ~~----~---~~~~~~~~~~~~~~~~~ 108 (109)
T 2qsa_A 89 DQ----R---FYNYYQYYRLRAAPKVD 108 (109)
T ss_dssp TC----H---HHHHHHHHHHC------
T ss_pred hH----H---HHHHHHHHHHHhccccC
Confidence 21 1 2578889998884 343
No 3
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=2.8e-21 Score=143.09 Aligned_cols=72 Identities=38% Similarity=0.594 Sum_probs=65.9
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
...|||+||||+++||..+|++|||+|+++||||+++..+ .+.+.|+.|+.||+||+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~--~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDP--KAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCT--THHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCH--HHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 4579999999999999999999999999999999997544 38899999999999999999999999998654
No 4
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=1e-21 Score=154.44 Aligned_cols=89 Identities=36% Similarity=0.564 Sum_probs=74.3
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCchh
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEA 92 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~~ 92 (264)
...+||+||||+++||.++||+|||+|+++||||+++..+ .+.+.|+.|+.||+||+||.+|..||.+|..+... .
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~--~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~~--~ 90 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNP--EAADKFKEINNAHAILTDATKRNIYDKYGSLGLYV--A 90 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCH--HHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHHH--H
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcH--HHHHHHHHHHHHHHHHcCHHHHHHHHHhccccccc--c
Confidence 3579999999999999999999999999999999997543 38899999999999999999999999999755431 1
Q ss_pred hccCCCCHHHHHH
Q psy18223 93 IFKSDIDWTMYWK 105 (264)
Q Consensus 93 ~~~~~~~~~~~f~ 105 (264)
......+|.++|.
T Consensus 91 ~~~~~~~~~~~~~ 103 (109)
T 2ctw_A 91 EQFGEENVNTYFV 103 (109)
T ss_dssp HHTCTTHHHHHHH
T ss_pred cccCCcchHHHhh
Confidence 1223467777775
No 5
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.83 E-value=3e-21 Score=140.97 Aligned_cols=69 Identities=36% Similarity=0.655 Sum_probs=62.3
Q ss_pred hcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCC
Q psy18223 11 YYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGT 84 (264)
Q Consensus 11 ~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~ 84 (264)
++...|||+||||+++||..+|++||++|+++||||+++. +.+.|+.|+.||+||+||.+|..||.+|.
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~-----~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD-----GAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT-----CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC-----HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 4567899999999999999999999999999999999874 25789999999999999999999999985
No 6
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.83 E-value=4.2e-21 Score=141.55 Aligned_cols=71 Identities=35% Similarity=0.554 Sum_probs=65.0
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCC
Q psy18223 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLED 87 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~ 87 (264)
..|||+||||+++||.++|++||++|+++||||+++.. .+.+.|+.|+.||+||+||.+|..||.+|..+.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP---GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT---THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 46999999999999999999999999999999998743 378999999999999999999999999986544
No 7
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=4.8e-21 Score=142.77 Aligned_cols=73 Identities=42% Similarity=0.643 Sum_probs=66.4
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
...|||+||||+++||.++||+||++|+++||||+++.. .+.+.+.|+.|+.||+||+||.+|..||..|..+
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN-KEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT-HHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 357999999999999999999999999999999999744 3458899999999999999999999999998654
No 8
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=8e-21 Score=140.36 Aligned_cols=71 Identities=42% Similarity=0.659 Sum_probs=65.2
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
...|||+||||+++||..+|++||++|+++||||+++.. .+.+.|+.|+.||+||+||.+|..||..|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP---GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH---HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 357999999999999999999999999999999999743 37899999999999999999999999998654
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.5e-20 Score=142.25 Aligned_cols=71 Identities=37% Similarity=0.499 Sum_probs=65.2
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
...|||+||||+++||.++||+|||+|+++||||+++.. .+.+.|+.|+.||+||+||.+|..||.+|...
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP---GAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST---THHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh---hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 457999999999999999999999999999999999743 37899999999999999999999999998643
No 10
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=9.4e-21 Score=144.30 Aligned_cols=75 Identities=41% Similarity=0.644 Sum_probs=67.7
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDE 88 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~ 88 (264)
...|||+||||+++||.++||+||++|+++||||+++.. .+.+.+.|+.|+.||+||+||.+|..||..|.....
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 81 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDN-KEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWR 81 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSC-SHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCcc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 457999999999999999999999999999999999754 245889999999999999999999999999976654
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.9e-20 Score=140.63 Aligned_cols=71 Identities=37% Similarity=0.566 Sum_probs=64.9
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
...|||+||||+++||.++||+|||+|+++||||+++.. .+.+.|+.|+.||+||+||.+|..||..|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSP---DAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSH---HHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 357999999999999999999999999999999999732 48899999999999999999999999988543
No 12
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=2e-20 Score=142.71 Aligned_cols=74 Identities=28% Similarity=0.455 Sum_probs=66.3
Q ss_pred hcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC----hhhHHHHHHHHHHHHHHHhhchhhhhhhccccCC
Q psy18223 11 YYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTE----EDKEVATEKFKILGLVHSILSDVEKRKVYDQTGT 84 (264)
Q Consensus 11 ~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~----~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~ 84 (264)
.+...|||+||||+++||..+||+|||+|+++||||+++. .....+.+.|+.|+.||+||+||.+|..||....
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 3567899999999999999999999999999999999863 2335689999999999999999999999998764
No 13
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=2e-20 Score=147.70 Aligned_cols=73 Identities=33% Similarity=0.445 Sum_probs=66.2
Q ss_pred cCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCC
Q psy18223 12 YKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLE 86 (264)
Q Consensus 12 ~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~ 86 (264)
....|||+||||+++||.++||+|||+|+++||||+++..+ .+.+.|+.|+.||+||+||.+|..||..|..+
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~--~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENP--KAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCS--THHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH--HHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 34589999999999999999999999999999999997544 38899999999999999999999999988544
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.80 E-value=1.6e-20 Score=145.26 Aligned_cols=73 Identities=36% Similarity=0.592 Sum_probs=64.6
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCC
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDE 88 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~ 88 (264)
.|||+||||+++||.++||+||++|+++||||+++.. .+.+.+.|+.|+.||+||+||.+|..||..|..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDN-KEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSC-CHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCcc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 5899999999999999999999999999999999744 345889999999999999999999999998865443
No 15
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=3.8e-20 Score=143.00 Aligned_cols=71 Identities=32% Similarity=0.551 Sum_probs=64.7
Q ss_pred cCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCC
Q psy18223 12 YKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGT 84 (264)
Q Consensus 12 ~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~ 84 (264)
+...|||+||||+++||.++||+|||+|+++||||+++..+ .+.+.|+.|+.||+||+||.+|..||....
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~--~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSA--EAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCS--HHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCH--HHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 45679999999999999999999999999999999997543 388999999999999999999999998654
No 16
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=157.24 Aligned_cols=133 Identities=15% Similarity=0.271 Sum_probs=98.9
Q ss_pred CCCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCh---hhHHHHHHHHHHHHHHHhhchhhhhhhccc--cCCCC
Q psy18223 14 TKDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEE---DKEVATEKFKILGLVHSILSDVEKRKVYDQ--TGTLE 86 (264)
Q Consensus 14 ~~d~Y~vLgv~~~--as~~eIkkaYrkl~l~~HPDk~~~~---~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~--~G~~~ 86 (264)
..|||+||||+++ ++..+||++||+|+++||||+++.. .+..+.+.|+.|+.||+||+||.+|+.||. .|...
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~G~~~ 121 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEI 121 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTCCC
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhcCCCc
Confidence 5799999999986 7999999999999999999998643 344578899999999999999999999984 55422
Q ss_pred CCCchhhc-----cCCCCHHHHHHhhccCCCHHHHHhHHHhhcCcHHHH-HHHHHHHhcCCCChhhhhhcc
Q psy18223 87 DEDDEAIF-----KSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEI-NDFKRAYVQGEGDMDLIFELV 151 (264)
Q Consensus 87 ~~~~~~~~-----~~~~~~~~~f~~~F~~vt~edi~~f~~~y~gs~eE~-~dl~~~y~~~~g~~~~i~~~v 151 (264)
..+..... .....|.+.+...+ +.++|..|...+.+..++. .+|..+|. .|+++.+...+
T Consensus 122 ~~e~~~~~d~~fLme~me~~E~le~~~---~~~~l~~l~~~~~~~~~~~~~~l~~~~~--~~d~~~A~~~v 187 (207)
T 3bvo_A 122 PERTDYEMDRQFLIEIMEINEKLAEAE---SEAAMKEIESIVKAKQKEFTDNVSSAFE--QDDFEEAKEIL 187 (207)
T ss_dssp CSSCSSSSCHHHHHHHHHHHHHHHHCC---SHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHH
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHH
Confidence 11100000 01123434444333 6788999999999988877 78888886 57887766655
No 17
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.79 E-value=4.4e-20 Score=140.79 Aligned_cols=70 Identities=39% Similarity=0.634 Sum_probs=63.8
Q ss_pred hcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCC
Q psy18223 11 YYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTL 85 (264)
Q Consensus 11 ~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~ 85 (264)
++...|||+||||+++||.++|++||++|+++||||+++.. .+.|+.|++||+||+||.+|..||..|..
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 73 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD-----TEKFKEISEAFEILNDPQKREIYDQYGLE 73 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC-----HHHHHHHHHHHHHHTSHHHHHHHHHHCHH
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh-----HHHHHHHHHHHHHHCCHHHHHHHHHHCHH
Confidence 45678999999999999999999999999999999998643 46999999999999999999999998853
No 18
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.78 E-value=3.5e-20 Score=146.96 Aligned_cols=84 Identities=23% Similarity=0.401 Sum_probs=70.5
Q ss_pred CCcccccccCCCCCH--HHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCchh
Q psy18223 15 KDLYEVLNVDKTATP--EQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEA 92 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~--~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~~ 92 (264)
.+||+||||+++|+. .+||+|||+|++++|||+++. .++|+.|+.||+||+||.+|+.||.+|........+
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~------~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~~~~~~ 81 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD------EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDATEIP 81 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT------TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCCCCCCC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc------HHHHHHHHHHHHHHCCHHHHHHhhhcccccccccCC
Confidence 589999999999999 999999999999999999873 468999999999999999999999988755443222
Q ss_pred hccCCCCHHHHHH
Q psy18223 93 IFKSDIDWTMYWK 105 (264)
Q Consensus 93 ~~~~~~~~~~~f~ 105 (264)
.+ +...|.++|+
T Consensus 82 ~~-g~p~w~~w~~ 93 (114)
T 1gh6_A 82 TY-GTDEWEQWWN 93 (114)
T ss_dssp CC-SSSCHHHHHH
T ss_pred CC-CCchHHHHHh
Confidence 22 4577887764
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.78 E-value=1.2e-19 Score=155.71 Aligned_cols=90 Identities=32% Similarity=0.515 Sum_probs=73.8
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCCCchhhc
Q psy18223 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEAIF 94 (264)
Q Consensus 15 ~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~~~~~~~ 94 (264)
.|||+||||+++||.++||+|||+|+++||||+++..+ ++.+.|+.|++||+||+||.+|..||.+|..+.... ..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~--~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~--~~ 77 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNP--NAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN--QG 77 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCT--THHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT--CS
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh--HHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc--cc
Confidence 58999999999999999999999999999999997554 388999999999999999999999999997655421 11
Q ss_pred cCCCCHHHHHHhhcc
Q psy18223 95 KSDIDWTMYWKSLYK 109 (264)
Q Consensus 95 ~~~~~~~~~f~~~F~ 109 (264)
+....| .+|...|+
T Consensus 78 ~~~~~~-~~~~~~fg 91 (210)
T 3apq_A 78 GQYESW-SYYRYDFG 91 (210)
T ss_dssp CCCCCH-HHHHHSSS
T ss_pred cccccc-cccccccc
Confidence 123345 56666554
No 20
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=5.5e-19 Score=134.29 Aligned_cols=69 Identities=23% Similarity=0.384 Sum_probs=61.6
Q ss_pred HHHHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhh
Q psy18223 7 LCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKV 78 (264)
Q Consensus 7 ~~~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~ 78 (264)
....++...|||+||||+++||.++||+|||+|+++||||+++.. .+.+.|+.|+.||+||+||.+|+.
T Consensus 19 ~~~~~~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 19 AIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP---GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HHHHHHTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT---THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHhcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCcccccC
Confidence 344567789999999999999999999999999999999999743 278899999999999999998874
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.74 E-value=8.7e-19 Score=145.48 Aligned_cols=72 Identities=28% Similarity=0.495 Sum_probs=64.5
Q ss_pred cCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh----hhHHHHHHHHHHHHHHHhhchhhhhhhccccC
Q psy18223 12 YKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEE----DKEVATEKFKILGLVHSILSDVEKRKVYDQTG 83 (264)
Q Consensus 12 ~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~----~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G 83 (264)
....|||+||||+++||.++||+|||+|++++|||+++.. .++.+.+.|+.|++||+||+||.+|+.||..+
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4467999999999999999999999999999999998643 23457899999999999999999999999765
No 22
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.73 E-value=2.2e-19 Score=166.10 Aligned_cols=69 Identities=35% Similarity=0.484 Sum_probs=0.0
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCC
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGT 84 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~ 84 (264)
...|||+||||+++||.++||+|||+|+++||||+++.. .+.++|+.|++||+||+||.+|+.||.++.
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN---DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp ------------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh---HHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 347999999999999999999999999999999998743 388999999999999999999999999743
No 23
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.70 E-value=6.5e-18 Score=143.12 Aligned_cols=69 Identities=16% Similarity=0.230 Sum_probs=61.5
Q ss_pred CCCcccccccCCCCC--HHHHHHHHHHHHHhhCCCCCCChh---hHHHHHHHHHHHHHHHhhchhhhhhhcccc
Q psy18223 14 TKDLYEVLNVDKTAT--PEQIRKAFYKLSLVVHPDRVTEED---KEVATEKFKILGLVHSILSDVEKRKVYDQT 82 (264)
Q Consensus 14 ~~d~Y~vLgv~~~as--~~eIkkaYrkl~l~~HPDk~~~~~---~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~ 82 (264)
..|||+||||+++++ ..+|+++||+|+++||||+++..+ +..+.+.|+.|+.||+||+||.+|..||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 579999999999998 999999999999999999986443 234789999999999999999999999974
No 24
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.70 E-value=6.9e-18 Score=125.32 Aligned_cols=63 Identities=17% Similarity=0.289 Sum_probs=56.9
Q ss_pred CCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCC
Q psy18223 15 KDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGT 84 (264)
Q Consensus 15 ~d~Y~vLgv~~~--as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~ 84 (264)
.++|+||||+++ +|..+||+|||+|+++||||+++ ..+.|+.|+.||+||+||.+|..++ +|.
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~------~~~~f~~i~~AYe~L~~~~~r~~~~-~g~ 75 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG------SHALMQELNSLWGTFKTEVYNLRMN-LGG 75 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC------CHHHHHHHHHHHHHHHHHHHHHTTC-CSS
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC------CHHHHHHHHHHHHHHhhHHHHHHHh-cCC
Confidence 479999999999 99999999999999999999986 3578999999999999999999844 553
No 25
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.70 E-value=9.2e-18 Score=142.89 Aligned_cols=71 Identities=25% Similarity=0.400 Sum_probs=62.2
Q ss_pred HHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhh-HHHHHHHHHHHHHHHhhchhhhhhhc
Q psy18223 9 EKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-EVATEKFKILGLVHSILSDVEKRKVY 79 (264)
Q Consensus 9 ~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~-~~a~~~F~~i~~Ay~iLsd~~kR~~Y 79 (264)
.-.|...|||+||||+++||..+||+|||+|+++||||+++.... ..+.+.|+.|++||+||+||.+|..|
T Consensus 111 ~vl~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 111 TVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp GGSCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHhcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 344555799999999999999999999999999999999864432 24889999999999999999999987
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.69 E-value=2e-18 Score=146.07 Aligned_cols=65 Identities=25% Similarity=0.325 Sum_probs=57.7
Q ss_pred CCcccccccCCCCC--HHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCC
Q psy18223 15 KDLYEVLNVDKTAT--PEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTL 85 (264)
Q Consensus 15 ~d~Y~vLgv~~~as--~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~ 85 (264)
.+||+||||+++|| .++||+|||++++++|||++++ .+.|+.|++||+||+||.+|+.||.+|..
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~------~e~F~~I~~AYevLsdp~kR~~YD~~G~~ 77 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD------EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 77 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C------CTTTTHHHHHHHHHHHHHHHHTSCGGGGC
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC------HHHHHHHHHHHHHhCCHHHHHHHhccCCc
Confidence 68999999999998 6999999999999999999873 36899999999999999999999999963
No 27
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.68 E-value=1.4e-17 Score=140.67 Aligned_cols=68 Identities=15% Similarity=0.216 Sum_probs=61.5
Q ss_pred CcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCh---hhHHHHHHHHHHHHHHHhhchhhhhhhccccC
Q psy18223 16 DLYEVLNVDKTA--TPEQIRKAFYKLSLVVHPDRVTEE---DKEVATEKFKILGLVHSILSDVEKRKVYDQTG 83 (264)
Q Consensus 16 d~Y~vLgv~~~a--s~~eIkkaYrkl~l~~HPDk~~~~---~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G 83 (264)
|||+||||++++ |..+|+++||+|+++||||+++.. .+..+.+.|+.|+.||+||+||.+|..||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 999999999999999999998643 23457789999999999999999999999754
No 28
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.68 E-value=1.6e-17 Score=126.75 Aligned_cols=64 Identities=25% Similarity=0.363 Sum_probs=54.9
Q ss_pred HHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChh-hHHHHHHHHHHHHHHHhhch
Q psy18223 9 EKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-KEVATEKFKILGLVHSILSD 72 (264)
Q Consensus 9 ~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~-~~~a~~~F~~i~~Ay~iLsd 72 (264)
.-.|...++|++|||+++||..+||+|||+++++||||++++++ ...+.+.|+.|++||+||.+
T Consensus 27 ~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 27 TVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp GTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 33444469999999999999999999999999999999987543 23578899999999999986
No 29
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.68 E-value=1.8e-17 Score=125.61 Aligned_cols=64 Identities=23% Similarity=0.237 Sum_probs=57.3
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhh
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRK 77 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~ 77 (264)
...++|+||||+++||.++||+|||+|+++||||+++... +.+.+.|+.|++||+||+|...|.
T Consensus 14 ~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~-~~a~~~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENH-DIANEVFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCH-HHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred cHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCch-HHHHHHHHHHHHHHHHHHhhcccc
Confidence 3468999999999999999999999999999999997543 458999999999999999987773
No 30
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.67 E-value=1.6e-17 Score=130.11 Aligned_cols=68 Identities=19% Similarity=0.319 Sum_probs=57.6
Q ss_pred hHHHHhcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC-----hhhHHHHHHHHHHHHHHHhhchhh
Q psy18223 6 QLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTE-----EDKEVATEKFKILGLVHSILSDVE 74 (264)
Q Consensus 6 ~~~~~~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~-----~~~~~a~~~F~~i~~Ay~iLsd~~ 74 (264)
++....|...|||+|||++. ||..+||+|||+++++||||+++. ..+..|.++|+.|++||+||+|+.
T Consensus 32 ~l~~~l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 32 TLQYILWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TGGGTSCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHhcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 34455677789999999996 999999999999999999999752 123357899999999999999985
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.61 E-value=2.2e-16 Score=114.77 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=51.0
Q ss_pred CCcccccccCC-CCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhh
Q psy18223 15 KDLYEVLNVDK-TATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKR 76 (264)
Q Consensus 15 ~d~Y~vLgv~~-~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR 76 (264)
.++|+||||++ ++|.++|++|||+|+++||||+++ ..+.|+.|+.||+||+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g------~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG------SPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC------CHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC------CHHHHHHHHHHHHHHhhhhhc
Confidence 47899999999 799999999999999999999975 346899999999999998765
No 32
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.60 E-value=5.9e-17 Score=163.32 Aligned_cols=76 Identities=34% Similarity=0.502 Sum_probs=40.9
Q ss_pred hcCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhccccCCCCCC
Q psy18223 11 YYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDE 88 (264)
Q Consensus 11 ~~~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~G~~~~~ 88 (264)
.....|||+||||+++||.++||+|||+|+++||||+++..+ .+.+.|+.|+.||+||+||.+|+.||.+|..+..
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~--~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~ 92 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNP--NAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 92 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-------------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh--HHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence 344679999999999999999999999999999999986444 3889999999999999999999999999976654
No 33
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.59 E-value=3.8e-16 Score=133.06 Aligned_cols=66 Identities=24% Similarity=0.346 Sum_probs=59.5
Q ss_pred cCCCCccccc------ccCC-CCCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhcccc
Q psy18223 12 YKTKDLYEVL------NVDK-TATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQT 82 (264)
Q Consensus 12 ~~~~d~Y~vL------gv~~-~as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~~ 82 (264)
....|||+|| |+++ +||..+||+|||+|+++||||+++. +.+.|+.|+.||+||+||.+|..||..
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ-----GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS-----CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc-----HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 3457999999 4665 9999999999999999999999974 567899999999999999999999983
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.14 E-value=3.4e-11 Score=109.90 Aligned_cols=69 Identities=38% Similarity=0.615 Sum_probs=58.4
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChh-hHHHHHHHHHHHHHHHhhchhhhhhhccc
Q psy18223 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-KEVATEKFKILGLVHSILSDVEKRKVYDQ 81 (264)
Q Consensus 13 ~~~d~Y~vLgv~~~as~~eIkkaYrkl~l~~HPDk~~~~~-~~~a~~~F~~i~~Ay~iLsd~~kR~~YD~ 81 (264)
...++|.+||+.+.++..+|+++|+++++++|||+.+..+ +..+...|+.|++||+||+||++|..||.
T Consensus 380 ~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 380 QKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp HSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred cchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 3469999999999999999999999999999999987543 45689999999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.79 E-value=3.9e-09 Score=75.24 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=45.3
Q ss_pred cccccccCCC---CCHHHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchh
Q psy18223 17 LYEVLNVDKT---ATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDV 73 (264)
Q Consensus 17 ~Y~vLgv~~~---as~~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~ 73 (264)
=|.||||+++ ++.++|+++||+|...+|||+.+ ..-.+..|+.|+++|...
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG------S~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG------SFYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC------CHHHHHHHHHHHHHHHHH
Confidence 3679999999 99999999999999999999986 456788999999999753
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=86.88 E-value=0.47 Score=46.57 Aligned_cols=50 Identities=8% Similarity=0.163 Sum_probs=38.3
Q ss_pred HhcCCCCcccccccCCCCCH--HHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHh
Q psy18223 10 KYYKTKDLYEVLNVDKTATP--EQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSI 69 (264)
Q Consensus 10 ~~~~~~d~Y~vLgv~~~as~--~eIkkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~i 69 (264)
..-+..+||.+||++.+... .+|++|||++++..+++ .+++..|..|+.|
T Consensus 624 ~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~----------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 624 LKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ----------RHRYTLVDMANKV 675 (681)
T ss_dssp HTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH----------HHHHHHHHHHHHH
T ss_pred HHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh----------HHHHHHHHHhccc
Confidence 33456679999999776655 67999999999966554 3578888888776
No 37
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=35.34 E-value=29 Score=22.91 Aligned_cols=23 Identities=13% Similarity=0.235 Sum_probs=20.5
Q ss_pred chHHHHHHHHHHHhhcCCCCchh
Q psy18223 157 SEEDRYRQIIQDLIDKEEVPAFD 179 (264)
Q Consensus 157 ~d~~R~~~ii~~~i~~~~~~~~~ 179 (264)
-|..|..++++.+.++|++|.-+
T Consensus 7 RDv~RaiELle~lq~sgevp~~K 29 (53)
T 1zl8_A 7 RDVQRILELMEHVQKTGEVNNAK 29 (53)
T ss_dssp HHHHHHHHHHHHHGGGSSSTHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCcHH
Confidence 47899999999999999999765
No 38
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=20.80 E-value=1.4e+02 Score=19.52 Aligned_cols=41 Identities=29% Similarity=0.209 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHHHHHhhchhhhhhhcc
Q psy18223 33 RKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVEKRKVYD 80 (264)
Q Consensus 33 kkaYrkl~l~~HPDk~~~~~~~~a~~~F~~i~~Ay~iLsd~~kR~~YD 80 (264)
.+.+|.....-||+.. ..+..+.|...|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~~-------~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH-------NAELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHTTCTTSC-------HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC-------HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4566777778888865 3567888999999999877655444
Done!