RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy18223
(264 letters)
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain,
chaperone; NMR {Homo sapiens}
Length = 155
Score = 77.2 bits (190), Expect = 9e-18
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDR----VTEEDKEVATEKFKILGLVHSIL 70
KD Y +L D +A +++ + KL L+ HPD+ V E +KF + IL
Sbjct: 10 KDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKIL 69
Query: 71 SDVEKRKVYDQTGTLEDEDDEAIFKSDIDW 100
+ E ++ YD +D + + +
Sbjct: 70 GNEETKREYDLQRCEDDLRNVGPVDAQVYL 99
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone,
helix-turn-helix, structural genomics, NPPSFA; NMR {Mus
musculus}
Length = 109
Score = 74.7 bits (184), Expect = 2e-17
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
+ LY VL +DK AT + I+K++ KL+L HPD+ ++ E A +KFK + H+IL+D
Sbjct: 17 ESLYHVLGLDKNATSDDIKKSYRKLALKYHPDK-NPDNPE-AADKFKEINNAHAILTDAT 74
Query: 75 KRKVYDQTG 83
KR +YD+ G
Sbjct: 75 KRNIYDKYG 83
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon,
chaperone; NMR {Homo sapiens}
Length = 99
Score = 73.9 bits (182), Expect = 4e-17
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
YE+L+V ++A+ + I+KA+ + +L HPD+ ++KE A +KFK + + +LSD
Sbjct: 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDK-NPDNKEFAEKKFKEVAEAYEVLSDKH 60
Query: 75 KRKVYDQTG 83
KR++YD+ G
Sbjct: 61 KREIYDRYG 69
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain,
helix-turn-helix motif, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 92
Score = 72.3 bits (178), Expect = 1e-16
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
+ YEVL V +A+PE I+KA+ KL+L HPD+ ++KE A +KFK++ + +LSD +
Sbjct: 9 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDK-NPDNKEEAEKKFKLVSEAYEVLSDSK 67
Query: 75 KRKVYDQTG 83
KR +YD+ G
Sbjct: 68 KRSLYDRAG 76
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain,
all helix protein, chaperone, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 99
Score = 72.4 bits (178), Expect = 1e-16
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
LY++L V TAT QI+ A+Y+ + HPDR E A E+F + + +L
Sbjct: 17 TALYDLLGVPSTATQAQIKAAYYRQCFLYHPDR-NSGSAE-AAERFTRISQAYVVLGSAT 74
Query: 75 KRKVYDQTG 83
R+ YD+
Sbjct: 75 LRRKYDRGL 83
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on
protein structural and functional analyses; NMR {Homo
sapiens}
Length = 82
Score = 71.5 bits (176), Expect = 1e-16
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
D YEVL+V + A+ E I+KA+ KL+L HPD+ E+KE A +FK + + +LSD +
Sbjct: 9 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDK-NPENKEEAERRFKQVAEAYEVLSDAK 67
Query: 75 KRKVYDQTG 83
KR +YD+ G
Sbjct: 68 KRDIYDRYG 76
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ
domain, endoplasmic reticulum, oxidor; 1.84A {Mus
musculus}
Length = 210
Score = 74.5 bits (183), Expect = 2e-16
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
++ Y +L V KTA+ +IR+AF KL+L +HPD+ + A F + + +L D +
Sbjct: 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDK-NPNNPN-AHGDFLKINRAYEVLKDED 59
Query: 75 KRKVYDQTG 83
RK YD+ G
Sbjct: 60 LRKKYDKYG 68
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, chaperone; NMR {Mus musculus} SCOP:
a.2.3.1
Length = 94
Score = 70.1 bits (172), Expect = 6e-16
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 6 QLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDR----VTEEDKEVATEKFK 61
+ + KD Y +L D +A +++ + KL L+ HPD+ V E +KF
Sbjct: 7 GMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFI 66
Query: 62 ILGLVHSILSDVEKRKVYDQTG 83
+ IL + E +K YD
Sbjct: 67 EIDQAWKILGNEETKKKYDLQR 88
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone,
helix-turn-helix, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 112
Score = 70.6 bits (173), Expect = 8e-16
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
+D Y +L D+ ++ EQI F +L HPD+ E+ + A E F+ L IL++ E
Sbjct: 20 EDYYTLLGCDELSSVEQILAEFKVRALECHPDK-HPENPK-AVETFQKLQKAKEILTNEE 77
Query: 75 KRKVYDQTG 83
R YD
Sbjct: 78 SRARYDHWR 86
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP:
a.2.3.1
Length = 77
Score = 68.4 bits (168), Expect = 2e-15
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
KD Y+ L + + A+ E+I++A+ + +L HPD+ E A EKFK + + +LSD
Sbjct: 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG---AEEKFKEIAEAYDVLSDPR 59
Query: 75 KRKVYDQTG 83
KR+++D+ G
Sbjct: 60 KREIFDRYG 68
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics,
PSI-2, protein STRU initiative; 2.90A {Klebsiella
pneumoniae subsp} PDB: 2kqx_A
Length = 329
Score = 73.4 bits (181), Expect = 2e-15
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
KD Y +L V T + I+ A+ +L+ HPD E D E KFK L +L D +
Sbjct: 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAE---AKFKDLAEAWEVLKDEQ 84
Query: 75 KRKVYDQTG 83
+R YDQ
Sbjct: 85 RRAEYDQLW 93
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 79
Score = 68.0 bits (167), Expect = 3e-15
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
D Y++L V + A+ ++I+KA+Y+L+ HPD ++D + A EKF L + +LSD
Sbjct: 7 GDYYQILGVPRNASQKEIKKAYYQLAKKYHPDT-NKDDPK-AKEKFSQLAEAYEVLSDEV 64
Query: 75 KRKVYDQTG 83
KRK YD G
Sbjct: 65 KRKQYDAYG 73
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR
{Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Length = 103
Score = 68.8 bits (169), Expect = 3e-15
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
+D YE+L V KTA +IRKA+ +L++ HPDR + DKE A KFK + + +L+D +
Sbjct: 3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDR-NQGDKE-AEAKFKEIKEAYEVLTDSQ 60
Query: 75 KRKVYDQTG 83
KR YDQ G
Sbjct: 61 KRAAYDQYG 69
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics,
molecular chaperone, NPPSFA; NMR {Mus musculus}
Length = 88
Score = 68.2 bits (167), Expect = 3e-15
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
D Y VL V +TA+ I+KA+ KL+ HPD+ + A ++F + + ILS+ E
Sbjct: 17 FDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPG---AEDRFIQISKAYEILSNEE 73
Query: 75 KRKVYDQTG 83
KR YD G
Sbjct: 74 KRTNYDHYG 82
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone,
helix-turn-helix, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 78
Score = 67.3 bits (165), Expect = 6e-15
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
D YE+L V + A+ E ++KA+ +L+L HPD+ ATE FK +G +++LS+ E
Sbjct: 7 GDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPG---ATEAFKAIGTAYAVLSNPE 63
Query: 75 KRKVYDQTG 83
KRK YDQ G
Sbjct: 64 KRKQYDQFG 72
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein;
3.20A {Simian virus 40} SCOP: a.2.3.1
Length = 114
Score = 68.3 bits (167), Expect = 6e-15
Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 13/118 (11%)
Query: 13 KTKDLYEVLNVDKTA--TPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSIL 70
++ L ++L ++++A +RKA+ K HPD+ +E EK K + ++ +
Sbjct: 6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE------EKMKKMNTLYKKM 59
Query: 71 SDVEKRKVYDQTGTLEDEDDEAIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAE 128
D K G D + + +D W+ + EE++ E E
Sbjct: 60 EDGVKYAHQPDFGGFWDATEIPTYGTD-----EWEQWWNAFNEENLFCSEEMPSSDDE 112
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase
regulat protein complex; 3.10A {Simian virus 40} PDB:
2pkg_C
Length = 174
Score = 69.6 bits (170), Expect = 8e-15
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 13 KTKDLYEVLNVDKTA--TPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSIL 70
++ L ++L ++++A +RKA+ K HPD+ +E EK K + ++ +
Sbjct: 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE------EKMKKMNTLYKKM 62
Query: 71 SDVEKRKVYDQTGTLEDEDD 90
D K G D +
Sbjct: 63 EDGVKYAHQPDFGGFWDATE 82
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone,
helix-turn-helix, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 88
Score = 66.9 bits (164), Expect = 1e-14
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
Y++L V K+A+ QI+KAF+KL++ HPD+ D E KF+ + + LSD
Sbjct: 7 GSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAE---AKFREIAEAYETLSDAN 63
Query: 75 KRKVYDQTG 83
+RK YD G
Sbjct: 64 RRKEYDTLG 72
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5,
structural genomics, PSI-2, protein structure
initiative; 1.25A {Saccharomyces cerevisiae}
Length = 92
Score = 67.0 bits (164), Expect = 1e-14
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSD 72
K LY++L V +A ++++K + K +L HPD+ T TEKFK + IL+D
Sbjct: 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG-----DTEKFKEISEAFEILND 60
Query: 73 VEKRKVYDQTG 83
+KR++YDQ G
Sbjct: 61 PQKREIYDQYG 71
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone,
APC90013.2, structural genomics, protein structure
initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Length = 73
Score = 66.1 bits (162), Expect = 1e-14
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSD 72
K Y+VL V A+ +++KA+ K++L HPD+ + E+FK + + +LSD
Sbjct: 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD-----GAEQFKQISQAYEVLSD 60
Query: 73 VEKRKVYDQTG 83
+KR++YDQ G
Sbjct: 61 EKKRQIYDQGG 71
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural
genomics, PSI-2, Pro structure initiative; 1.68A
{Caenorhabditis elegans}
Length = 109
Score = 67.1 bits (164), Expect = 1e-14
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 11 YYKTKDLYEVLNVDKTA-TPEQIRKAFYKLSLVVHPDRV-TEEDKEVATEKFKILGLVHS 68
Y ++ Y+VL V++ +++ KA+ L+ HPDRV +E+K +A E+F+++ +
Sbjct: 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYE 70
Query: 69 ILSDVEKRKVYDQTG 83
L D E + YD
Sbjct: 71 TLKDDEAKTNYDYYL 85
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated
protein RAP1, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 90
Score = 66.3 bits (162), Expect = 2e-14
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 5 LQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILG 64
+ +KD +++L V A+ +++ KA+ KL++++HPD+ + + FK +
Sbjct: 17 ADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG---SEDAFKAVV 73
Query: 65 LVHSILSDVEKRKVYD 80
+ L K
Sbjct: 74 NARTALLKNIKSGPSS 89
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, unknown function; NMR {Homo sapiens} SCOP:
a.2.3.1
Length = 88
Score = 60.9 bits (148), Expect = 2e-12
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
K++ V+ + +K +L L HPD+ E+ ++A E FK L + L E
Sbjct: 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDK-NPENHDIANEVFKHLQNEINRL---E 71
Query: 75 KRKVYDQTG 83
K+ DQ
Sbjct: 72 KQAFLDQNA 80
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin,
endoplasmic reticulum, oxidoreducta; 2.40A {Mus
musculus}
Length = 780
Score = 65.5 bits (159), Expect = 2e-12
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVHSILSDVE 74
++ Y +L V KTA+ +IR+AF KL+L +HPD+ + A F + + +L D +
Sbjct: 21 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDK--NPNNPNAHGDFLKINRAYEVLKDED 78
Query: 75 KRKVYDQTGTLEDEDDEAIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFK 134
RK YD+ G ED++ + Y +Y D E + F
Sbjct: 79 LRKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFV 138
Query: 135 RAYVQGEG 142
Y G
Sbjct: 139 NFYSPGSS 146
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic
reticulum, protein folding, tetratricopeptiderepeat, J
domain, unfolded protein respons; 3.00A {Homo sapiens}
PDB: 2y4u_A
Length = 450
Score = 61.6 bits (150), Expect = 4e-11
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 3 GLLQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDR-VTEEDKEVATEKFK 61
Q K + +D Y++L V + A ++I KA+ KL+L HPD EE+K+ A +KF
Sbjct: 370 EKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFI 429
Query: 62 ILGLVHSILSDVEKRKVYDQ 81
+ +LSD E RK +D
Sbjct: 430 DIAAAKEVLSDPEMRKKFDD 449
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 53.3 bits (127), Expect = 3e-08
Identities = 44/260 (16%), Positives = 75/260 (28%), Gaps = 74/260 (28%)
Query: 10 KYYKTKDLYEVLNVD-KTATPEQIRKAFYKLSLVVHPDRV--------------TEEDKE 54
K+ L ++ P + RK F +LS V P + D
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS--VFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 55 VATEKFKILGLV-----------HSILSDVEK---------RKVYDQTGTLEDEDDEAIF 94
V K LV SI +++ R + D + D + +
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465
Query: 95 KSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFKRAYVQGEGDMD-----LIFE 149
+D Y+ S + I + K E + F+ ++ D + +
Sbjct: 466 PPYLD--QYFYS-H--------IGHHLKNIEHPERMTLFRMVFL----DFRFLEQKIRHD 510
Query: 150 LVPFTHPSEE-------DRYRQIIQDLIDKEE--VPAFDKFLNEAKSKRNRRKRK----- 195
+ Y+ I D K E V A FL + + K
Sbjct: 511 STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570
Query: 196 --FEKEEKLFEKEKAKDERR 213
++E +FE E K +R
Sbjct: 571 ALMAEDEAIFE-EAHKQVQR 589
Score = 44.1 bits (103), Expect = 3e-05
Identities = 27/279 (9%), Positives = 72/279 (25%), Gaps = 99/279 (35%)
Query: 9 EKYYKTKDLYEVLNVDKTATPEQIRKAFYKLS----LVVHPDRVTEEDKEVATEKFKILG 64
++ Y ++ NV + ++R+A +L +++ G
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID-------------------G 157
Query: 65 --------LVHSILSDVEKRKVYDQTGTLEDEDDEAIFKSDIDWTMYWKSLYKDVTEEDI 116
+ + + + +D+ ++W +L + E +
Sbjct: 158 VLGSGKTWVALDVCLSYK-------------------VQCKMDFKIFWLNLKNCNSPETV 198
Query: 117 INYETKYKGSAEEINDFKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQIIQD-------L 169
+ E + + S + R++++ L
Sbjct: 199 L----------EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 170 I-----DKEEVPAFD---------------KFLNEAKSKR---NRRKRKFEKEE--KLFE 204
+ + + AF+ FL+ A + + +E L
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 205 K---EKAKDERRKKSGVRNSGADSSMDLIAAIQSKNATR 240
K + +D R+ + + +IA
Sbjct: 309 KYLDCRPQDLPREVL----TTNPRRLSIIAESIRDGLAT 343
Score = 37.1 bits (85), Expect = 0.005
Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 31/115 (26%)
Query: 108 YKD---VTEEDII-NYETKYKGSAEEINDFKRAYVQGEGDMDLIFELVPFTHPSEEDRYR 163
YKD V E+ + N++ K + D ++ + E ++D I
Sbjct: 18 YKDILSVFEDAFVDNFDCKD------VQDMPKSILSKE-EIDHIIMS-----KDAVSGTL 65
Query: 164 QIIQDLIDKEE--VPAF-------------DKFLNEAKSKRNRRKRKFEKEEKLF 203
++ L+ K+E V F E + + E+ ++L+
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP:
a.2.3.1 PDB: 1xi5_J
Length = 182
Score = 49.5 bits (117), Expect = 1e-07
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDRVT-EEDKEVATEKFKILGLVHSILSDVEKR 76
++ + + TPEQ++K + K LVVHPD+ T + ++ A F L S + ++
Sbjct: 120 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179
Query: 77 KVY 79
+Y
Sbjct: 180 PLY 182
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304,
center for structural genomics of infectious diseases,
CSGI; 2.15A {Vibrio cholerae}
Length = 174
Score = 49.2 bits (117), Expect = 1e-07
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 13 KTKDLYEVLNVDKTAT--PEQIRKAFYKLSLVVHPDRV---TEEDKEVATEKFKILGLVH 67
+ +E+ + + F L HPD +E D+ +A ++ + +
Sbjct: 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAY 61
Query: 68 SILSDVEKRKVYDQTGTLEDEDDEAIFKSDIDWTM 102
L D +R Y + + + E D + M
Sbjct: 62 QTLKDPLRRAEYLLSLQGIEMNAEQQTLQDPMFLM 96
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of
helices, viral protein; NMR {Murine polyomavirus} SCOP:
a.2.3.1
Length = 79
Score = 43.8 bits (103), Expect = 2e-06
Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
Query: 10 KYYKTKDLYEVLNVDKTA--TPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLVH 67
+ L E+L + + ++++A+ + SL++HPD+ + L +
Sbjct: 6 SRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH------ALMQELNSLW 59
Query: 68 SILSDVEKRKVYDQTGT 84
+ GT
Sbjct: 60 GTFKTEVYNLRMNLGGT 76
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN
auxilin-like J-domain containing protein, JAC1,
chloroplast accumulation response; 1.80A {Arabidopsis
thaliana}
Length = 106
Score = 42.7 bits (100), Expect = 9e-06
Identities = 10/51 (19%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDRV-----TEEDKEVATEKFKIL 63
++ + + +RK++ + L++HPD++ + K +A + F++L
Sbjct: 43 WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELL 93
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A
{Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Length = 171
Score = 43.4 bits (102), Expect = 1e-05
Identities = 15/139 (10%), Positives = 37/139 (26%), Gaps = 13/139 (9%)
Query: 16 DLYEVLNVDKTAT--PEQIRKAFYKLSLVVHPDRV---TEEDKEVATEKFKILGLVHSIL 70
D + + + + + F L HPD+ ++ ++ A ++ + L
Sbjct: 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61
Query: 71 SDVEKRKVY-------DQTGTLEDEDDEAIFKSDIDWTMYWKSLYKDVTEEDIINYETKY 123
R Y D D A ++ + + E + ++ +
Sbjct: 62 RHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRV 121
Query: 124 KGSAEE-INDFKRAYVQGE 141
K +
Sbjct: 122 KKMFDTRHQLMVEQLDNET 140
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural
genomics medical relev protein structure initiative,
PSI-2; 3.00A {Homo sapiens}
Length = 207
Score = 43.2 bits (101), Expect = 3e-05
Identities = 24/174 (13%), Positives = 74/174 (42%), Gaps = 18/174 (10%)
Query: 13 KTKDLYEVLNVDKTAT--PEQIRKAFYKLSLVVHPDRV---TEEDKEVATEKFKILGLVH 67
T+D + +++ +++ +++ + +L +VHPD ++ +K+ + + ++ +
Sbjct: 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAY 100
Query: 68 SILSDVEKRKVYDQTGTLEDEDDEAIFKSDIDWTMYWKSLYKDV----TEEDIINYETKY 123
L R +Y + + ++ D + + + + + +E + E+
Sbjct: 101 KTLLAPLSRGLYLLKLHGIEIPERTDYEMDRQFLIEIMEINEKLAEAESEAAMKEIESIV 160
Query: 124 KGSAEE-INDFKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQIIQDLIDKEEVP 176
K +E ++ A+ + D + E++ + RY I++ I +++P
Sbjct: 161 KAKQKEFTDNVSSAF--EQDDFEEAKEIL------TKMRYFSNIEEKIKLKKIP 206
>2qwo_B Putative tyrosine-protein phosphatase auxilin;
chaperone-cochaperone complex, ATP-binding,
nucleotide-bindi nucleus, phosphorylation, stress
response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B*
2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Length = 92
Score = 40.0 bits (93), Expect = 6e-05
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDRVT-EEDKEVATEKFKIL 63
++ + + TPEQ++K + K LVVHP + T + ++ A F L
Sbjct: 36 WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMEL 82
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 43.1 bits (101), Expect = 6e-05
Identities = 44/236 (18%), Positives = 74/236 (31%), Gaps = 52/236 (22%)
Query: 30 EQIRKAFYKLSLVVHPDRVTEEDKEVATE----KFKILGLVHSILSDVEKRKVYDQTGTL 85
Q+++ F K L + +D+ KF LG V S++ K +DQ L
Sbjct: 31 SQLQEQFNK-ILPEPTEGFAADDEPTTPAELVGKF--LGYVSSLVEP-SKVGQFDQVLNL 86
Query: 86 EDEDDEAIFKSDIDWTMYWKSLYKDVTEE-----DII-NY----------ETKYKGSA-- 127
+ E + D L ++ ++I NY K SA
Sbjct: 87 CLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALF 146
Query: 128 EEINDFK-RAYVQ--GEGDMDLIF-ELVPFTHPSEE--DRYRQIIQDLIDKEEVPAFDKF 181
+ + + G+G+ D F EL + Y ++ DLI + +
Sbjct: 147 RAVGEGNAQLVAIFGGQGNTDDYFEEL-------RDLYQTYHVLVGDLIKF----SAETL 195
Query: 182 LNEAKSKRNRRK---RKFEKEEKLFEKEKAKDERRKKSGVRNSGADSSMDLIAAIQ 234
++ + K + E L D+ S S LI IQ
Sbjct: 196 SELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLS------IPISCPLIGVIQ 245
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics,
PSI-biology, midwest center for structu genomics, MCSG,
J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Length = 181
Score = 40.0 bits (93), Expect = 2e-04
Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 12/77 (15%)
Query: 14 TKDLYEVLNVDKTATP-------EQIRKAFYKLSLVVHPDRVTEEDKEVATEKFKILGLV 66
T YE+ ++RK + +L HPD + +E+ L
Sbjct: 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ-----GSEQSSTLNQA 64
Query: 67 HSILSDVEKRKVYDQTG 83
+ L D +R Y
Sbjct: 65 YHTLKDPLRRSQYMLKL 81
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14;
DNAJ-fold, chaperone, protein transport; HET: FLC;
2.00A {Saccharomyces cerevisiae}
Length = 71
Score = 34.6 bits (80), Expect = 0.003
Identities = 8/31 (25%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 18 YEVLNVDKTA-TPEQIRKAFYKLSLVVHPDR 47
++LN+ + T +++++ K+ L HPD+
Sbjct: 17 LQILNLTENTLTKKKLKEVHRKIMLANHPDK 47
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation,
disulfide bonds tryparedoxin, thioredoxin, trypanosome;
1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A
1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Length = 146
Score = 36.2 bits (84), Expect = 0.003
Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 1 MKGLLQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKF 60
L++ +K++++K+ EV+ + F K+ + P +E ++++ + F
Sbjct: 47 TPQLIEFYDKFHESKNF-EVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLS-KHF 104
Query: 61 KILGLVHSILSDVEKRKVYDQTGTLEDEDD 90
+ + I D + V D
Sbjct: 105 NVESIPTLIGVDADSGDVVTTRARATLVKD 134
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron
transport; 1.80A {Leishmania major}
Length = 165
Score = 32.1 bits (73), Expect = 0.079
Identities = 11/97 (11%), Positives = 32/97 (32%), Gaps = 4/97 (4%)
Query: 1 MKGLLQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKF 60
L++ EK++ +K+ +E++ + + K+ + P + + +K+
Sbjct: 67 TPQLVEFYEKHHDSKN-FEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALT-KKY 124
Query: 61 KILGLVHSILSDVEKRKVYDQTGTLEDEDD--EAIFK 95
+ + I + + D F
Sbjct: 125 SVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFP 161
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin
domain, cytokine-cytokine REC complex; HET: NAG; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B*
2erj_B*
Length = 214
Score = 30.9 bits (69), Expect = 0.31
Identities = 6/64 (9%), Positives = 18/64 (28%)
Query: 92 AIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFKRAYVQGEGDMDLIFELV 151
+ + W+ E + +E + + ++ + + + L
Sbjct: 114 VVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLT 173
Query: 152 PFTH 155
P T
Sbjct: 174 PDTQ 177
>2ls5_A Uncharacterized protein; structural genomics, unknown function,
thioredoxin-like, NEW structural genomics research
consortium; NMR {Bacteroides thetaiotaomicron}
Length = 159
Score = 28.1 bits (63), Expect = 1.8
Identities = 12/94 (12%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 1 MKGLLQLCEKYYKTKDLYEVLNVDKTATPEQIRKAF--YKLSLVVHPDRVTEEDKEVATE 58
M + + +K + ++ +D+ E++ ++ + D ++ +
Sbjct: 52 MPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLD----PGADIFAK 107
Query: 59 -KFKILGLVHSILSDVEKRKVYDQTGTLEDEDDE 91
+ G+ ++L D E + V E+E
Sbjct: 108 YALRDAGITRNVLIDREGKIVKLTRLYNEEEFAS 141
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.0 bits (61), Expect = 2.0
Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 23/48 (47%)
Query: 194 RKFEKEEKLFEKEKAKDERRKKSGVRNSGADSSMDLIAAIQSKNATRE 241
+K + KL+ DS+ L AI AT E
Sbjct: 23 KKLQASLKLYA------------------DDSAPAL--AI---KATME 47
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 427
Score = 27.8 bits (61), Expect = 4.3
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 126 SAEEINDFKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFLNEA 185
+ N+F + E +M +F +E ++ ++L +K + K +
Sbjct: 324 YEAKRNEFLGELQKKEEEMRQMFVQR---VKEKEAELKEAEKELHEKFD--RLKKLHQDE 378
Query: 186 KSKRNRRKRKFEKEEKLFEKEKAKDERRKKSGVRNSG 222
K K +K+ + E F++ K E + G + G
Sbjct: 379 KKKLEDKKKSLDDEVNAFKQRKTAAELLQSQGSQAGG 415
>2w3t_A Peptide deformylase; protein biosynthesis, iron, nickel, hydrolase,
metal-binding; 1.69A {Escherichia coli} PDB: 2w3u_A
Length = 188
Score = 27.1 bits (61), Expect = 4.4
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 188 KRNRRKRKFEKEEKLFEKEKAKDERRKKSG 217
K+ R ++K EK ++ K +A +
Sbjct: 150 KQQRIRQKVEKLDR--LKARAPNSSSVDKL 177
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia
fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A
1oc9_B 1fg4_A 1oc9_A
Length = 144
Score = 26.6 bits (59), Expect = 4.7
Identities = 9/90 (10%), Positives = 31/90 (34%), Gaps = 2/90 (2%)
Query: 1 MKGLLQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEKF 60
L+ + + + K+ +EV+ + + E + + K+ + P + + + F
Sbjct: 47 TPQLIDFYKAHAEKKN-FEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLT-TGF 104
Query: 61 KILGLVHSILSDVEKRKVYDQTGTLEDEDD 90
+ + + + + + D
Sbjct: 105 DVKSIPTLVGVEADSGNIITTQARTMVVKD 134
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis
of alginate, structural genomics; 1.70A {Thermus
thermophilus}
Length = 464
Score = 27.5 bits (62), Expect = 5.6
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 5/43 (11%)
Query: 110 DVTE--EDIINYETKYKGSAEEINDFKRAYVQGEG---DMDLI 147
+ + E ++ E + A E D + AY + D+ +
Sbjct: 131 EEAKAIEALVPEEARALEGAYETLDLREAYFEALKAHLDLKAL 173
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR
{Escherichia coli}
Length = 90
Score = 25.7 bits (57), Expect = 7.0
Identities = 5/24 (20%), Positives = 16/24 (66%)
Query: 146 LIFELVPFTHPSEEDRYRQIIQDL 169
+ +++ F ++E ++RQ+ ++L
Sbjct: 1 MTIDVLQFKDEAQEQQFRQLTEEL 24
>2p4f_A Similar to SP|P32453 saccharomyces cerevisiae YNL ATP11; half
barrel, chaperone; HET: P6G; 1.40A {Candida glabrata cbs
138}
Length = 299
Score = 27.0 bits (59), Expect = 7.1
Identities = 11/86 (12%), Positives = 30/86 (34%)
Query: 159 EDRYRQIIQDLIDKEEVPAFDKFLNEAKSKRNRRKRKFEKEEKLFEKEKAKDERRKKSGV 218
EDRY++ + E V + ++ + +K++ K + L E E+ + +
Sbjct: 14 EDRYKEKLLQKAKAEGVESIEELKKRLADQIEEKKKELNKIDPLRELEQHLNAGSRIHTN 73
Query: 219 RNSGADSSMDLIAAIQSKNATRESGF 244
+ + ++ +
Sbjct: 74 KEHKTTKMSNKSNEKSGNVLPKDKPY 99
>3pn3_A Peptide deformylase 1B, chloroplastic; PDF, N-terminal excision
pathway, N induced-FIT, hydrolase-hydrolase inhibitor
complex; HET: PN3; 1.30A {Arabidopsis thaliana} PDB:
3m6p_A* 3o3j_A* 3pn2_A 3m6o_A* 3pn4_A* 3pn5_A 3m6q_A
3pn6_A 3m6r_A 3cpm_A
Length = 193
Score = 26.4 bits (59), Expect = 7.6
Identities = 4/27 (14%), Positives = 11/27 (40%)
Query: 188 KRNRRKRKFEKEEKLFEKEKAKDERRK 214
+ + + E EK +E++ +
Sbjct: 151 VLDSIREELEALEKKYEEKTGLPSPER 177
>2a19_A EIF-2- alpha, eukaryotic translation initiation factor 2 alpha;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Saccharomyces
cerevisiae} PDB: 2a1a_A* 1q46_A
Length = 175
Score = 26.3 bits (58), Expect = 7.9
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 8/71 (11%)
Query: 47 RVTEEDKEVATEKFKILGLVHSILSDVEKRKVYDQTGTLEDEDDEAIFKSDIDWTMYWKS 106
RV+ ED EK++ VHSIL ++ + +E + +
Sbjct: 88 RVSSEDIIKCEEKYQKSKTVHSILRYCAEK--------FQIPLEELYKTIAWPLSRKFGH 139
Query: 107 LYKDVTEEDII 117
Y+ I
Sbjct: 140 AYEAFKLSIID 150
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.313 0.132 0.364
Gapped
Lambda K H
0.267 0.0439 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,047,415
Number of extensions: 250716
Number of successful extensions: 824
Number of sequences better than 10.0: 1
Number of HSP's gapped: 755
Number of HSP's successfully gapped: 98
Length of query: 264
Length of database: 6,701,793
Length adjustment: 92
Effective length of query: 172
Effective length of database: 4,133,061
Effective search space: 710886492
Effective search space used: 710886492
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.1 bits)