Query psy18225
Match_columns 166
No_of_seqs 115 out of 363
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 16:54:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18225.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18225hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2308|consensus 100.0 6.8E-42 1.5E-46 310.1 8.5 166 1-166 270-441 (741)
2 KOG2308|consensus 98.0 6.6E-06 1.4E-10 76.4 5.2 64 97-163 441-504 (741)
3 PF05057 DUF676: Putative seri 97.6 0.00057 1.2E-08 54.8 9.4 21 142-162 77-97 (217)
4 cd00741 Lipase Lipase. Lipase 96.6 0.0057 1.2E-07 45.8 5.5 39 120-160 7-45 (153)
5 PF01764 Lipase_3: Lipase (cla 96.4 0.0081 1.8E-07 43.8 5.5 23 134-158 57-79 (140)
6 PF00975 Thioesterase: Thioest 96.2 0.01 2.2E-07 46.6 5.1 21 142-162 65-85 (229)
7 PF07819 PGAP1: PGAP1-like pro 96.1 0.011 2.4E-07 47.9 5.3 23 141-163 83-105 (225)
8 PF00151 Lipase: Lipase; Inte 96.1 0.032 7E-07 47.9 8.4 19 142-160 149-167 (331)
9 cd00519 Lipase_3 Lipase (class 95.7 0.024 5.1E-07 45.3 5.2 31 126-158 113-143 (229)
10 PLN02454 triacylglycerol lipas 95.5 0.023 5E-07 50.2 5.0 37 122-158 207-243 (414)
11 COG3208 GrsT Predicted thioest 95.4 0.015 3.3E-07 47.9 3.3 21 142-162 73-93 (244)
12 KOG1455|consensus 95.2 0.27 5.7E-06 42.0 10.3 49 13-76 43-92 (313)
13 PF05990 DUF900: Alpha/beta hy 95.2 0.32 6.9E-06 39.5 10.5 22 142-163 92-113 (233)
14 PLN02761 lipase class 3 family 95.0 0.037 8E-07 50.3 4.8 40 119-158 270-309 (527)
15 TIGR02427 protocat_pcaD 3-oxoa 95.0 0.036 7.9E-07 42.3 4.2 22 143-164 79-100 (251)
16 PLN02733 phosphatidylcholine-s 94.9 0.044 9.6E-07 48.8 5.1 38 120-163 145-182 (440)
17 PRK10749 lysophospholipase L2; 94.9 0.058 1.3E-06 45.4 5.6 22 142-163 130-151 (330)
18 PRK10673 acyl-CoA esterase; Pr 94.9 0.044 9.6E-07 43.2 4.5 21 143-163 81-101 (255)
19 PRK11126 2-succinyl-6-hydroxy- 94.8 0.053 1.1E-06 42.5 4.8 24 142-165 65-88 (242)
20 PLN02310 triacylglycerol lipas 94.8 0.043 9.2E-07 48.5 4.6 38 119-158 187-224 (405)
21 PLN02324 triacylglycerol lipas 94.8 0.047 1E-06 48.3 4.7 40 119-162 195-238 (415)
22 PHA02857 monoglyceride lipase; 94.7 0.079 1.7E-06 42.7 5.7 22 142-163 96-117 (276)
23 PLN02211 methyl indole-3-aceta 94.6 0.061 1.3E-06 44.2 4.9 23 142-164 86-108 (273)
24 KOG2564|consensus 94.5 0.033 7.2E-07 47.3 3.1 17 142-158 145-161 (343)
25 PLN02408 phospholipase A1 94.3 0.07 1.5E-06 46.6 4.8 36 119-158 180-215 (365)
26 COG2267 PldB Lysophospholipase 94.2 0.096 2.1E-06 44.1 5.3 24 142-165 106-129 (298)
27 PRK10566 esterase; Provisional 94.2 0.13 2.9E-06 40.7 5.8 23 142-164 106-128 (249)
28 PF12697 Abhydrolase_6: Alpha/ 94.1 0.08 1.7E-06 39.6 4.2 21 143-163 66-86 (228)
29 PLN02571 triacylglycerol lipas 94.1 0.08 1.7E-06 46.9 4.7 37 118-158 205-241 (413)
30 COG2819 Predicted hydrolase of 94.0 0.046 1E-06 45.7 2.8 45 113-164 114-158 (264)
31 PF02450 LCAT: Lecithin:choles 93.9 0.1 2.2E-06 45.6 5.0 23 142-164 118-140 (389)
32 PRK00870 haloalkane dehalogena 93.8 0.099 2.1E-06 43.0 4.6 22 142-163 114-135 (302)
33 PF10230 DUF2305: Uncharacteri 93.8 0.087 1.9E-06 43.6 4.3 24 142-165 83-106 (266)
34 PLN02965 Probable pheophorbida 93.8 0.097 2.1E-06 41.9 4.4 22 143-164 72-93 (255)
35 PF00561 Abhydrolase_1: alpha/ 93.8 0.094 2E-06 40.0 4.1 39 119-163 26-64 (230)
36 TIGR01250 pro_imino_pep_2 prol 93.7 0.12 2.5E-06 40.5 4.6 22 143-164 96-117 (288)
37 PLN02385 hydrolase; alpha/beta 93.6 0.16 3.4E-06 42.9 5.5 21 143-163 162-182 (349)
38 PLN02824 hydrolase, alpha/beta 93.6 0.13 2.9E-06 41.8 4.9 23 142-164 101-123 (294)
39 PLN02298 hydrolase, alpha/beta 93.5 0.2 4.2E-06 41.8 5.9 21 142-162 133-153 (330)
40 TIGR03695 menH_SHCHC 2-succiny 93.5 0.14 3.1E-06 38.7 4.7 22 142-163 69-90 (251)
41 TIGR01607 PST-A Plasmodium sub 93.4 0.14 3.1E-06 43.3 5.0 20 142-161 141-160 (332)
42 KOG2369|consensus 93.4 0.13 2.8E-06 46.1 4.8 20 142-161 181-200 (473)
43 PLN03037 lipase class 3 family 93.3 0.12 2.5E-06 47.1 4.4 38 119-158 296-333 (525)
44 TIGR03611 RutD pyrimidine util 93.3 0.14 3E-06 39.6 4.4 22 142-163 79-100 (257)
45 cd00707 Pancreat_lipase_like P 93.2 0.17 3.6E-06 42.0 5.0 21 142-162 111-131 (275)
46 TIGR02240 PHA_depoly_arom poly 93.1 0.15 3.3E-06 41.2 4.5 22 143-164 91-112 (276)
47 PLN02802 triacylglycerol lipas 93.1 0.14 3.1E-06 46.4 4.6 35 120-158 311-345 (509)
48 TIGR01840 esterase_phb esteras 93.0 0.19 4.1E-06 39.5 4.8 23 142-164 94-116 (212)
49 KOG1454|consensus 92.9 0.17 3.8E-06 43.2 4.7 23 142-164 127-149 (326)
50 TIGR03502 lipase_Pla1_cef extr 92.8 0.19 4.2E-06 47.9 5.2 21 142-162 554-574 (792)
51 PF03959 FSH1: Serine hydrolas 92.6 0.44 9.6E-06 37.8 6.4 35 122-161 85-120 (212)
52 PLN02162 triacylglycerol lipas 92.5 0.2 4.4E-06 45.0 4.8 25 132-158 269-293 (475)
53 PRK10349 carboxylesterase BioH 92.4 0.099 2.1E-06 41.6 2.4 22 142-163 73-94 (256)
54 PRK11460 putative hydrolase; P 92.3 0.36 7.8E-06 38.8 5.6 23 142-164 102-124 (232)
55 PLN00413 triacylglycerol lipas 92.0 0.19 4.1E-06 45.3 4.0 24 133-158 276-299 (479)
56 PRK03592 haloalkane dehalogena 91.9 0.3 6.5E-06 39.8 4.8 22 143-164 93-114 (295)
57 PLN02753 triacylglycerol lipas 91.9 0.26 5.6E-06 44.9 4.7 39 119-158 289-327 (531)
58 PLN02934 triacylglycerol lipas 91.9 0.26 5.6E-06 44.8 4.6 26 131-158 311-336 (515)
59 PRK11071 esterase YqiA; Provis 91.8 0.3 6.5E-06 38.2 4.5 23 142-164 60-82 (190)
60 TIGR01738 bioH putative pimelo 91.8 0.12 2.5E-06 39.5 2.1 22 142-163 64-85 (245)
61 PLN02679 hydrolase, alpha/beta 91.7 0.31 6.7E-06 41.6 4.9 21 142-162 154-174 (360)
62 PLN02719 triacylglycerol lipas 91.7 0.27 5.9E-06 44.7 4.6 39 119-158 275-313 (518)
63 PF01083 Cutinase: Cutinase; 91.7 0.55 1.2E-05 36.6 5.9 46 115-163 56-101 (179)
64 PF12695 Abhydrolase_5: Alpha/ 91.7 0.28 6.1E-06 35.1 3.9 22 142-163 60-81 (145)
65 TIGR03100 hydr1_PEP hydrolase, 91.5 0.42 9.2E-06 39.1 5.3 34 127-161 85-118 (274)
66 TIGR01392 homoserO_Ac_trn homo 91.4 0.3 6.6E-06 41.3 4.5 22 143-164 126-148 (351)
67 PLN02517 phosphatidylcholine-s 91.2 0.41 8.9E-06 44.4 5.2 21 142-162 212-232 (642)
68 TIGR03343 biphenyl_bphD 2-hydr 91.1 0.14 3.1E-06 41.0 2.0 23 142-164 100-122 (282)
69 TIGR03101 hydr2_PEP hydrolase, 91.1 0.57 1.2E-05 39.0 5.7 22 142-163 98-119 (266)
70 PRK03204 haloalkane dehalogena 90.9 0.4 8.6E-06 39.4 4.6 22 142-163 100-121 (286)
71 COG3319 Thioesterase domains o 90.8 0.23 5E-06 41.3 3.1 24 136-161 60-83 (257)
72 TIGR03056 bchO_mg_che_rel puta 90.5 0.43 9.3E-06 37.7 4.3 21 143-163 95-115 (278)
73 PF11288 DUF3089: Protein of u 90.5 0.77 1.7E-05 37.1 5.7 46 118-164 71-116 (207)
74 PLN02652 hydrolase; alpha/beta 90.3 0.67 1.5E-05 40.6 5.7 20 142-161 207-226 (395)
75 PLN02442 S-formylglutathione h 90.0 0.6 1.3E-05 38.7 4.9 42 117-164 123-164 (283)
76 PRK05855 short chain dehydroge 89.8 0.57 1.2E-05 41.5 5.0 22 142-163 93-114 (582)
77 PRK06489 hypothetical protein; 89.8 0.34 7.4E-06 41.2 3.4 22 143-164 153-175 (360)
78 COG3545 Predicted esterase of 89.7 0.49 1.1E-05 37.4 3.9 37 111-159 39-75 (181)
79 TIGR01836 PHA_synth_III_C poly 89.6 0.56 1.2E-05 39.7 4.5 22 142-163 135-156 (350)
80 PRK08775 homoserine O-acetyltr 89.6 0.52 1.1E-05 39.7 4.3 21 144-164 139-159 (343)
81 PRK14875 acetoin dehydrogenase 89.4 0.61 1.3E-05 39.0 4.6 21 143-163 197-217 (371)
82 COG0412 Dienelactone hydrolase 89.3 3.3 7.2E-05 33.6 8.7 103 24-163 28-132 (236)
83 TIGR01249 pro_imino_pep_1 prol 89.2 0.64 1.4E-05 38.4 4.5 22 143-164 95-116 (306)
84 PRK10985 putative hydrolase; P 89.2 0.69 1.5E-05 38.8 4.7 21 142-162 130-150 (324)
85 PLN02511 hydrolase 89.0 0.69 1.5E-05 40.1 4.7 22 142-163 172-193 (388)
86 PLN03087 BODYGUARD 1 domain co 88.8 0.43 9.3E-06 43.1 3.4 23 142-164 273-295 (481)
87 PLN00021 chlorophyllase 88.7 0.76 1.6E-05 39.0 4.7 21 143-163 126-146 (313)
88 PF01674 Lipase_2: Lipase (cla 88.7 0.74 1.6E-05 37.4 4.4 31 121-158 60-90 (219)
89 TIGR02821 fghA_ester_D S-formy 88.6 0.53 1.2E-05 38.6 3.6 23 142-164 137-159 (275)
90 TIGR00976 /NonD putative hydro 88.6 0.56 1.2E-05 42.5 4.0 30 136-165 90-119 (550)
91 PLN02847 triacylglycerol lipas 88.0 0.82 1.8E-05 42.4 4.7 21 136-158 246-266 (633)
92 PF05277 DUF726: Protein of un 87.9 1.3 2.8E-05 38.4 5.6 39 124-162 201-239 (345)
93 TIGR03230 lipo_lipase lipoprot 87.6 1 2.2E-05 40.3 5.0 20 142-161 118-137 (442)
94 PF11187 DUF2974: Protein of u 87.6 0.81 1.8E-05 37.2 4.0 17 142-158 83-99 (224)
95 COG4782 Uncharacterized protei 87.4 7.5 0.00016 34.1 10.0 21 142-162 190-210 (377)
96 PLN02894 hydrolase, alpha/beta 87.0 1.3 2.7E-05 38.7 5.2 21 143-163 176-196 (402)
97 PRK07581 hypothetical protein; 86.7 0.47 1E-05 39.7 2.2 22 143-164 123-145 (339)
98 PLN02578 hydrolase 86.5 1.3 2.7E-05 37.7 4.8 23 142-164 151-173 (354)
99 smart00824 PKS_TE Thioesterase 85.6 1.9 4.2E-05 32.2 5.0 21 142-162 63-83 (212)
100 KOG4569|consensus 85.5 0.99 2.2E-05 38.7 3.7 31 121-157 155-185 (336)
101 KOG3724|consensus 85.2 1.4 3.1E-05 42.2 4.8 20 143-162 182-201 (973)
102 KOG3101|consensus 85.2 0.61 1.3E-05 38.4 2.1 32 118-155 122-153 (283)
103 PTZ00472 serine carboxypeptida 84.7 1.4 3E-05 39.4 4.4 37 121-157 148-185 (462)
104 PRK00175 metX homoserine O-ace 84.6 1.7 3.7E-05 37.4 4.7 21 143-163 146-167 (379)
105 PLN02980 2-oxoglutarate decarb 84.0 1.5 3.3E-05 45.1 4.8 23 142-164 1444-1466(1655)
106 COG0596 MhpC Predicted hydrola 84.0 1.6 3.5E-05 32.4 3.9 35 124-164 75-109 (282)
107 PF11144 DUF2920: Protein of u 83.5 16 0.00034 32.5 10.3 52 113-166 153-206 (403)
108 PRK13604 luxD acyl transferase 83.5 2 4.3E-05 36.7 4.6 18 143-160 108-125 (307)
109 PF06821 Ser_hydrolase: Serine 83.4 1.1 2.3E-05 34.8 2.7 20 142-161 54-73 (171)
110 PF02089 Palm_thioest: Palmito 83.4 2.6 5.7E-05 35.5 5.2 84 70-160 6-97 (279)
111 PRK06765 homoserine O-acetyltr 82.4 1.9 4.2E-05 37.6 4.2 23 142-164 159-182 (389)
112 PF06028 DUF915: Alpha/beta hy 82.0 1.2 2.5E-05 37.0 2.6 37 118-163 87-123 (255)
113 PF05728 UPF0227: Uncharacteri 81.7 2.9 6.4E-05 32.9 4.6 16 144-159 60-75 (187)
114 PLN02872 triacylglycerol lipas 81.3 3.3 7.1E-05 36.4 5.3 19 143-161 160-178 (395)
115 PF07082 DUF1350: Protein of u 80.3 4.3 9.3E-05 33.8 5.3 15 143-157 90-104 (250)
116 TIGR01838 PHA_synth_I poly(R)- 79.0 2.8 6E-05 38.4 4.2 16 142-157 261-276 (532)
117 PF06259 Abhydrolase_8: Alpha/ 78.1 3.7 8E-05 32.3 4.1 22 142-163 108-129 (177)
118 PF01738 DLH: Dienelactone hyd 76.6 6.5 0.00014 30.6 5.2 31 134-164 88-119 (218)
119 PF00756 Esterase: Putative es 76.6 1.5 3.3E-05 34.7 1.6 42 115-163 94-135 (251)
120 PLN03084 alpha/beta hydrolase 76.3 4.5 9.7E-05 35.3 4.6 21 143-163 197-217 (383)
121 PRK05077 frsA fermentation/res 75.9 3.3 7.2E-05 36.4 3.7 29 134-162 255-284 (414)
122 KOG4540|consensus 75.7 2.9 6.3E-05 36.0 3.1 17 142-158 275-291 (425)
123 COG5153 CVT17 Putative lipase 75.7 2.9 6.3E-05 36.0 3.1 17 142-158 275-291 (425)
124 PLN02606 palmitoyl-protein thi 73.7 5.3 0.00011 34.2 4.2 40 121-161 74-113 (306)
125 KOG3975|consensus 73.7 6.2 0.00013 33.3 4.5 21 142-162 109-129 (301)
126 PF08538 DUF1749: Protein of u 73.2 5.3 0.00012 34.1 4.1 24 142-165 107-130 (303)
127 KOG2029|consensus 71.8 8.4 0.00018 36.1 5.2 39 119-157 502-540 (697)
128 PRK10439 enterobactin/ferric e 70.7 5.3 0.00011 35.2 3.7 45 114-163 264-308 (411)
129 PRK10252 entF enterobactin syn 69.8 7.2 0.00016 38.4 4.7 21 142-162 1132-1152(1296)
130 PF02230 Abhydrolase_2: Phosph 69.5 16 0.00034 28.6 5.9 44 120-164 83-126 (216)
131 PF00326 Peptidase_S9: Prolyl 69.3 7.8 0.00017 29.9 4.1 21 142-162 63-83 (213)
132 PRK10162 acetyl esterase; Prov 69.1 5.3 0.00012 33.5 3.3 20 142-161 153-172 (318)
133 PRK07868 acyl-CoA synthetase; 69.1 3.8 8.2E-05 39.9 2.6 20 143-162 141-160 (994)
134 PF12740 Chlorophyllase2: Chlo 69.0 4.8 0.0001 33.6 2.9 25 139-164 88-112 (259)
135 COG1647 Esterase/lipase [Gener 67.4 4.9 0.00011 33.2 2.5 24 143-166 85-108 (243)
136 PF03403 PAF-AH_p_II: Platelet 65.5 4.3 9.4E-05 35.4 2.0 22 142-163 227-248 (379)
137 KOG4372|consensus 63.1 2.3 4.9E-05 37.7 -0.1 17 18-34 75-91 (405)
138 KOG1552|consensus 62.7 11 0.00025 31.4 3.9 43 122-165 110-152 (258)
139 PF07859 Abhydrolase_3: alpha/ 62.6 10 0.00023 28.9 3.6 20 142-161 70-89 (211)
140 COG1075 LipA Predicted acetylt 61.6 5.2 0.00011 34.2 1.8 21 143-163 127-147 (336)
141 KOG4409|consensus 59.9 6 0.00013 34.6 1.8 17 142-158 159-175 (365)
142 KOG2382|consensus 59.7 10 0.00023 32.5 3.3 13 142-154 122-134 (315)
143 PRK04940 hypothetical protein; 59.5 16 0.00034 28.9 4.0 15 144-158 61-75 (180)
144 PF12048 DUF3530: Protein of u 58.9 33 0.00071 29.1 6.2 44 118-165 171-215 (310)
145 KOG4627|consensus 58.3 19 0.0004 29.8 4.3 42 118-164 116-157 (270)
146 COG0429 Predicted hydrolase of 56.9 1.3E+02 0.0029 26.2 9.5 91 19-156 70-161 (345)
147 PF05677 DUF818: Chlamydia CHL 55.0 27 0.00059 30.6 5.0 21 143-163 215-235 (365)
148 PF02129 Peptidase_S15: X-Pro 54.8 13 0.00029 30.2 3.1 34 133-166 91-124 (272)
149 PF08237 PE-PPE: PE-PPE domain 54.3 36 0.00079 27.5 5.5 47 112-163 22-68 (225)
150 TIGR01839 PHA_synth_II poly(R) 53.3 21 0.00045 33.1 4.3 33 121-159 272-304 (560)
151 PF00450 Peptidase_S10: Serine 51.2 24 0.00052 30.0 4.2 36 121-156 113-149 (415)
152 TIGR02690 resist_ArsH arsenica 50.9 15 0.00032 29.9 2.7 69 90-161 78-149 (219)
153 cd08633 PI-PLCc_eta2 Catalytic 49.6 53 0.0011 27.4 5.8 50 5-66 39-90 (254)
154 PF14253 AbiH: Bacteriophage a 49.5 8.9 0.00019 31.0 1.2 14 142-155 234-247 (270)
155 COG1506 DAP2 Dipeptidyl aminop 46.9 29 0.00063 32.1 4.3 31 134-164 463-494 (620)
156 COG0627 Predicted esterase [Ge 45.0 21 0.00046 30.5 2.9 16 143-158 152-167 (316)
157 cd08629 PI-PLCc_delta1 Catalyt 44.2 65 0.0014 27.0 5.5 51 5-67 39-91 (258)
158 cd08631 PI-PLCc_delta4 Catalyt 43.8 74 0.0016 26.6 5.8 51 5-67 39-91 (258)
159 PF12146 Hydrolase_4: Putative 43.3 20 0.00043 24.0 2.0 38 22-75 15-52 (79)
160 KOG4178|consensus 42.7 18 0.00039 31.2 2.1 21 142-162 112-132 (322)
161 cd08630 PI-PLCc_delta3 Catalyt 42.6 67 0.0015 26.9 5.4 51 5-67 39-91 (258)
162 KOG3967|consensus 42.3 17 0.00037 30.1 1.8 40 124-165 173-212 (297)
163 KOG0604|consensus 41.5 15 0.00033 31.9 1.5 16 150-166 247-262 (400)
164 COG0657 Aes Esterase/lipase [L 41.5 35 0.00076 28.1 3.7 20 142-161 151-170 (312)
165 PF10340 DUF2424: Protein of u 40.5 54 0.0012 28.9 4.7 35 126-162 180-214 (374)
166 KOG2551|consensus 40.3 27 0.00058 28.7 2.6 37 26-64 8-44 (230)
167 PF09752 DUF2048: Uncharacteri 40.3 75 0.0016 27.7 5.5 37 121-160 156-192 (348)
168 PF10503 Esterase_phd: Esteras 38.3 55 0.0012 26.4 4.2 24 142-165 96-119 (220)
169 COG3243 PhaC Poly(3-hydroxyalk 37.9 50 0.0011 29.7 4.1 40 118-163 162-201 (445)
170 cd08593 PI-PLCc_delta Catalyti 37.7 96 0.0021 25.9 5.6 51 5-67 39-91 (257)
171 PLN02633 palmitoyl protein thi 36.4 49 0.0011 28.5 3.7 34 120-161 79-112 (314)
172 KOG1551|consensus 36.0 38 0.00083 29.0 3.0 20 142-161 194-213 (371)
173 KOG1515|consensus 35.5 65 0.0014 27.8 4.4 26 134-160 158-183 (336)
174 cd08594 PI-PLCc_eta Catalytic 34.7 1.2E+02 0.0026 24.9 5.6 51 5-67 39-91 (227)
175 PF07224 Chlorophyllase: Chlor 32.9 82 0.0018 26.9 4.4 43 119-161 95-138 (307)
176 PF12715 Abhydrolase_7: Abhydr 32.4 33 0.00072 30.4 2.2 26 133-158 215-241 (390)
177 cd08628 PI-PLCc_gamma2 Catalyt 32.2 1.9E+02 0.0042 24.1 6.5 50 4-65 38-89 (254)
178 PF05448 AXE1: Acetyl xylan es 32.1 39 0.00083 28.8 2.5 28 133-160 164-192 (320)
179 KOG4530|consensus 31.6 44 0.00094 26.4 2.4 48 85-134 69-116 (199)
180 PF06057 VirJ: Bacterial virul 31.3 92 0.002 24.9 4.3 31 122-154 49-79 (192)
181 cd08632 PI-PLCc_eta1 Catalytic 31.1 2.2E+02 0.0047 23.8 6.7 49 5-65 39-89 (253)
182 COG0431 Predicted flavoprotein 31.0 37 0.0008 26.3 2.0 62 88-157 53-115 (184)
183 cd08595 PI-PLCc_zeta Catalytic 30.8 2E+02 0.0043 24.1 6.4 52 4-67 38-91 (257)
184 PF09713 A_thal_3526: Plant pr 30.8 47 0.001 21.1 2.1 32 107-141 9-47 (54)
185 PLN02223 phosphoinositide phos 29.9 1.3E+02 0.0029 27.8 5.6 46 5-62 144-191 (537)
186 KOG3847|consensus 29.8 21 0.00045 31.2 0.5 21 142-162 240-260 (399)
187 PLN02213 sinapoylglucose-malat 29.4 79 0.0017 26.6 3.9 39 124-162 31-74 (319)
188 TIGR00128 fabD malonyl CoA-acy 28.7 43 0.00093 27.1 2.2 32 25-56 3-36 (290)
189 COG4188 Predicted dienelactone 27.7 29 0.00063 30.4 1.0 19 142-160 158-176 (365)
190 cd08626 PI-PLCc_beta4 Catalyti 26.7 2.5E+02 0.0054 23.5 6.3 53 5-67 39-93 (257)
191 PLN03016 sinapoylglucose-malat 26.4 80 0.0017 28.1 3.6 38 125-162 146-188 (433)
192 COG1352 CheR Methylase of chem 26.4 60 0.0013 27.2 2.6 34 105-151 209-242 (268)
193 PF11467 LEDGF: Lens epitheliu 26.3 71 0.0015 23.0 2.7 16 121-136 62-77 (106)
194 KOG4840|consensus 26.2 41 0.00088 28.1 1.5 18 138-155 102-119 (299)
195 PF01713 Smr: Smr domain; Int 25.8 86 0.0019 20.7 2.9 14 25-38 29-42 (83)
196 KOG1283|consensus 25.5 1.1E+02 0.0024 26.9 4.1 39 119-157 97-136 (414)
197 COG0331 FabD (acyl-carrier-pro 25.4 54 0.0012 28.0 2.2 14 142-155 84-97 (310)
198 PF09192 Act-Frag_cataly: Acti 24.9 34 0.00073 28.9 0.8 12 152-163 157-168 (275)
199 cd08623 PI-PLCc_beta1 Catalyti 24.7 83 0.0018 26.3 3.1 53 5-67 39-93 (258)
200 PRK05371 x-prolyl-dipeptidyl a 24.2 70 0.0015 30.7 2.9 24 141-164 336-359 (767)
201 COG4663 FcbT1 TRAP-type mannit 23.4 61 0.0013 28.2 2.1 28 115-142 306-333 (363)
202 PF10296 DUF2404: Putative int 23.2 82 0.0018 21.5 2.4 40 110-155 12-51 (91)
203 PF14615 Rsa3: Ribosome-assemb 22.6 29 0.00064 21.4 0.1 33 115-152 6-39 (47)
204 COG4814 Uncharacterized protei 22.6 40 0.00086 28.5 0.8 14 144-157 137-150 (288)
205 PLN02209 serine carboxypeptida 22.4 1.2E+02 0.0026 27.1 3.9 39 124-162 147-190 (437)
206 smart00827 PKS_AT Acyl transfe 21.5 1.5E+02 0.0032 24.1 4.0 14 144-157 83-96 (298)
207 PF10929 DUF2811: Protein of u 21.5 63 0.0014 20.8 1.4 21 122-142 5-25 (57)
208 cd08627 PI-PLCc_gamma1 Catalyt 21.4 3.2E+02 0.007 22.4 5.9 51 5-67 39-91 (229)
209 PF10081 Abhydrolase_9: Alpha/ 21.2 1.7E+02 0.0036 25.0 4.3 43 118-160 84-126 (289)
210 KOG1516|consensus 21.0 71 0.0015 28.6 2.2 17 142-158 194-210 (545)
211 COG2382 Fes Enterochelin ester 20.6 72 0.0016 27.3 2.0 20 142-161 176-195 (299)
212 PRK13562 acetolactate synthase 20.6 1.1E+02 0.0024 21.2 2.6 27 5-31 24-52 (84)
213 PRK04946 hypothetical protein; 20.2 58 0.0013 25.7 1.3 10 25-34 126-135 (181)
No 1
>KOG2308|consensus
Probab=100.00 E-value=6.8e-42 Score=310.13 Aligned_cols=166 Identities=43% Similarity=0.718 Sum_probs=154.9
Q ss_pred CCceecccCCcccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCC---CCeEEEeeecc--
Q psy18225 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSK---LRAEFFPVEWR-- 75 (166)
Q Consensus 1 ~~~~l~rg~~~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~---~~v~~~pI~W~-- 75 (166)
.|+.|+|+|.+++.+.+++++|+||||+||||||.++.+.+.+|+..||....++.++|+.+.. .|++|+||+|+
T Consensus 270 ~~~~l~~~~~ee~~~~~k~~~v~hllf~vhgig~~~~~~~i~~n~~~~r~~~~~~~~sh~~~~~~r~v~v~fLpv~w~~~ 349 (741)
T KOG2308|consen 270 VGRGLRRFLEEENDLASKPVPVDHLLFVVHGIGQKMKDNSIIENVDSFRELPKALGESHLKNSSDRPVRVLFLPVEWRKG 349 (741)
T ss_pred cccccchhhhhhccccCCCccchheeeeeeccccCccccchhhcchhHHHHHHHHHHhhhccccCCccceeEEEeeeeEc
Confidence 4788999999999999999999999999999999998888999999999999999999998754 45799999999
Q ss_pred CCccccCCccccccchhhhhhHHHhhhhhhhhhcccCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhH
Q psy18225 76 SSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYTSPIYGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCV 155 (166)
Q Consensus 76 ~~l~~d~~~~~~it~~~i~~lR~~~~~~~~Dvl~y~sp~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsv 155 (166)
+....+...+++||+++++.+|.|+|++++|||+|+||.|+++|+..|+.++|++|.+|+.+||.|+|+|+|.||||||+
T Consensus 350 ~~~~~~~~~v~~Itl~~i~~~R~~lnst~lDilyY~Splyrq~Iv~~V~~elNr~y~lf~~rnPef~G~Vsi~gHSLGSv 429 (741)
T KOG2308|consen 350 GEKTEDVNFVDDITLDSIPRKRIFLNSTALDILYYMSPLYRQEIVKGVARELNRLYALFKDRNPEFNGKVSIAGHSLGSV 429 (741)
T ss_pred cchhccccchhhcccccchhHHhhccchhhhhcccCChHHHHHHHHHHHHHHHHHHHHHHhcChhhcCceeeccCCCCce
Confidence 44455667889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCC-CC
Q psy18225 156 IVYDVITGW-IP 166 (166)
Q Consensus 156 I~~DiL~~~-~~ 166 (166)
|+|||||.+ +|
T Consensus 430 it~Dil~~q~~P 441 (741)
T KOG2308|consen 430 ITYDILSHQRSP 441 (741)
T ss_pred EEEeecccccCc
Confidence 999999999 46
No 2
>KOG2308|consensus
Probab=98.03 E-value=6.6e-06 Score=76.36 Aligned_cols=64 Identities=23% Similarity=0.370 Sum_probs=59.1
Q ss_pred HHHhhhhhhhhhcccCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcC
Q psy18225 97 RHMLNASAMDIMYYTSPIYGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 97 R~~~~~~~~Dvl~y~sp~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
+.|+-+.++|+++|..|.|++++.+.+..+.|+.|+.|.+.+|.|+|+|+ +++++.+-++++..
T Consensus 441 P~~l~D~~ld~~~~~e~e~~D~~~~~~~~q~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~ 504 (741)
T KOG2308|consen 441 PTFLLDELLDKLLYEEPEYRDDILQSVESQKNKTYRLLKEFNPEPKGKVH---LSLESLIGGSGLPK 504 (741)
T ss_pred cchhHHHHHhhhhcccccCcchHHHHHHhhhhhhhhhhhhhccCcccccc---hhhhhcccccccce
Confidence 45789999999999999999999999999999999999999999999999 99999888877753
No 3
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.60 E-value=0.00057 Score=54.84 Aligned_cols=21 Identities=43% Similarity=0.499 Sum_probs=18.0
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
.-+|++|||||||+|+=-+|.
T Consensus 77 ~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccceEEEecccHHHHHHHHH
Confidence 568999999999999876664
No 4
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.57 E-value=0.0057 Score=45.83 Aligned_cols=39 Identities=26% Similarity=0.325 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHh
Q psy18225 120 QQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDV 160 (166)
Q Consensus 120 ~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~Di 160 (166)
...+.+++.....+....+| ..+|.++||||||.++.-+
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p--~~~i~v~GHSlGg~lA~l~ 45 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYP--DYKIHVTGHSLGGALAGLA 45 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCC--CCeEEEEEcCHHHHHHHHH
Confidence 34455555555555555456 6899999999999988754
No 5
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.42 E-value=0.0081 Score=43.81 Aligned_cols=23 Identities=35% Similarity=0.569 Sum_probs=17.9
Q ss_pred HHhcCCCCCccEEEEecChhhHHHH
Q psy18225 134 FVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 134 f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
..+.+| +.+|.+.||||||.++-
T Consensus 57 ~~~~~~--~~~i~itGHSLGGalA~ 79 (140)
T PF01764_consen 57 LVEKYP--DYSIVITGHSLGGALAS 79 (140)
T ss_dssp HHHHST--TSEEEEEEETHHHHHHH
T ss_pred HHhccc--CccchhhccchHHHHHH
Confidence 334444 68999999999999874
No 6
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.16 E-value=0.01 Score=46.58 Aligned_cols=21 Identities=10% Similarity=0.382 Sum_probs=19.2
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
+|++.|+|||+||+|+|++-.
T Consensus 65 ~gp~~L~G~S~Gg~lA~E~A~ 85 (229)
T PF00975_consen 65 EGPYVLAGWSFGGILAFEMAR 85 (229)
T ss_dssp SSSEEEEEETHHHHHHHHHHH
T ss_pred CCCeeehccCccHHHHHHHHH
Confidence 789999999999999999753
No 7
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.14 E-value=0.011 Score=47.90 Aligned_cols=23 Identities=13% Similarity=0.356 Sum_probs=20.4
Q ss_pred CCccEEEEecChhhHHHHHhhcC
Q psy18225 141 HNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 141 F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
-..+|.||||||||+++-.+|..
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~ 105 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSL 105 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhc
Confidence 37899999999999999988864
No 8
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.14 E-value=0.032 Score=47.86 Aligned_cols=19 Identities=32% Similarity=0.406 Sum_probs=16.0
Q ss_pred CccEEEEecChhhHHHHHh
Q psy18225 142 NAKISIIAHSLGCVIVYDV 160 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~Di 160 (166)
-.+|+|||||||+-||--+
T Consensus 149 ~~~ihlIGhSLGAHvaG~a 167 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFA 167 (331)
T ss_dssp GGGEEEEEETCHHHHHHHH
T ss_pred hhHEEEEeeccchhhhhhh
Confidence 4689999999999988643
No 9
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.65 E-value=0.024 Score=45.26 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 126 ELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 126 ~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
++-....+.++.+| +.+|.+.||||||.++.
T Consensus 113 ~~~~~~~~~~~~~p--~~~i~vtGHSLGGaiA~ 143 (229)
T cd00519 113 QVLPELKSALKQYP--DYKIIVTGHSLGGALAS 143 (229)
T ss_pred HHHHHHHHHHhhCC--CceEEEEccCHHHHHHH
Confidence 33333444445556 68899999999998875
No 10
>PLN02454 triacylglycerol lipase
Probab=95.51 E-value=0.023 Score=50.24 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 122 GLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 122 ~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
++..|+....++.++.+|+.+.+|.+.||||||.|+.
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAt 243 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLAT 243 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHH
Confidence 3444444444455566676666899999999998874
No 11
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.38 E-value=0.015 Score=47.93 Aligned_cols=21 Identities=24% Similarity=0.686 Sum_probs=19.3
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
+.+..++|||||++++|++.-
T Consensus 73 d~P~alfGHSmGa~lAfEvAr 93 (244)
T COG3208 73 DAPFALFGHSMGAMLAFEVAR 93 (244)
T ss_pred CCCeeecccchhHHHHHHHHH
Confidence 789999999999999999864
No 12
>KOG1455|consensus
Probab=95.23 E-value=0.27 Score=42.00 Aligned_cols=49 Identities=16% Similarity=0.316 Sum_probs=33.0
Q ss_pred cccCCCC-CCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCeEEEeeeccC
Q psy18225 13 ALETDRP-EDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWRS 76 (166)
Q Consensus 13 ~~~~~~~-~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v~~~pI~W~~ 76 (166)
..|.... .++.-||+++||-|... ..+|.+++..+.+ .+..+..+.|..
T Consensus 43 ~~W~p~~~~~pr~lv~~~HG~g~~~--------s~~~~~~a~~l~~-------~g~~v~a~D~~G 92 (313)
T KOG1455|consen 43 QSWLPLSGTEPRGLVFLCHGYGEHS--------SWRYQSTAKRLAK-------SGFAVYAIDYEG 92 (313)
T ss_pred EecccCCCCCCceEEEEEcCCcccc--------hhhHHHHHHHHHh-------CCCeEEEeeccC
Confidence 3455544 48899999999988543 2357777666653 446777888764
No 13
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=95.22 E-value=0.32 Score=39.54 Aligned_cols=22 Identities=27% Similarity=0.540 Sum_probs=19.5
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..+|+|+|||||+-+....|..
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHH
Confidence 7899999999999999888753
No 14
>PLN02761 lipase class 3 family protein
Probab=95.00 E-value=0.037 Score=50.25 Aligned_cols=40 Identities=23% Similarity=0.458 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
+.+.|..++.++.+.+...+++..-+|.+.||||||.|+.
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAt 309 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLAL 309 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHH
Confidence 5566677777766666443455678999999999999864
No 15
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=94.98 E-value=0.036 Score=42.33 Aligned_cols=22 Identities=18% Similarity=0.207 Sum_probs=18.4
Q ss_pred ccEEEEecChhhHHHHHhhcCC
Q psy18225 143 AKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~~ 164 (166)
.+|+++|||+||.++.-+....
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~ 100 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARR 100 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHC
Confidence 4799999999999998766543
No 16
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=94.95 E-value=0.044 Score=48.84 Aligned_cols=38 Identities=29% Similarity=0.524 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcC
Q psy18225 120 QQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 120 ~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
.+.+.+.+.++|+. ++ ..+|.|+||||||.++...|..
T Consensus 145 ~~~Lk~lIe~~~~~----~g--~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 145 MDGLKKKLETVYKA----SG--GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHH----cC--CCCEEEEEECHhHHHHHHHHHH
Confidence 34444444444443 32 4599999999999999877753
No 17
>PRK10749 lysophospholipase L2; Provisional
Probab=94.94 E-value=0.058 Score=45.39 Aligned_cols=22 Identities=27% Similarity=0.286 Sum_probs=18.9
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..++.++||||||.|+...+..
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~~ 151 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQR 151 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHHh
Confidence 4789999999999999877654
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=94.88 E-value=0.044 Score=43.22 Aligned_cols=21 Identities=29% Similarity=0.363 Sum_probs=18.5
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
+++.++|||+||.++......
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTAL 101 (255)
T ss_pred CceEEEEECHHHHHHHHHHHh
Confidence 579999999999999988654
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=94.82 E-value=0.053 Score=42.50 Aligned_cols=24 Identities=17% Similarity=0.015 Sum_probs=20.6
Q ss_pred CccEEEEecChhhHHHHHhhcCCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGWI 165 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~~ 165 (166)
..++.++||||||.++..+....+
T Consensus 65 ~~~~~lvG~S~Gg~va~~~a~~~~ 88 (242)
T PRK11126 65 ILPYWLVGYSLGGRIAMYYACQGL 88 (242)
T ss_pred CCCeEEEEECHHHHHHHHHHHhCC
Confidence 469999999999999998876653
No 20
>PLN02310 triacylglycerol lipase
Probab=94.81 E-value=0.043 Score=48.49 Aligned_cols=38 Identities=18% Similarity=0.465 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
+.+.|.+++.++.+.+...+| +-+|.+.||||||.++.
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e--~~sI~vTGHSLGGALAt 224 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGE--EVSLTVTGHSLGGALAL 224 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCC--cceEEEEcccHHHHHHH
Confidence 456677777777666654344 56899999999999873
No 21
>PLN02324 triacylglycerol lipase
Probab=94.77 E-value=0.047 Score=48.33 Aligned_cols=40 Identities=30% Similarity=0.482 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHH----HHhhc
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIV----YDVIT 162 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~----~DiL~ 162 (166)
+.+.|..++++ +++.+|+..-+|.+.||||||.|+ +||..
T Consensus 195 areqVl~eV~~----L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 195 AQEQVQGELKR----LLELYKNEEISITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred HHHHHHHHHHH----HHHHCCCCCceEEEecCcHHHHHHHHHHHHHHH
Confidence 45555555554 444456656789999999999885 56654
No 22
>PHA02857 monoglyceride lipase; Provisional
Probab=94.72 E-value=0.079 Score=42.68 Aligned_cols=22 Identities=18% Similarity=0.289 Sum_probs=18.5
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..++.++||||||.|+..+...
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAYK 117 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHHh
Confidence 5789999999999999876543
No 23
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=94.61 E-value=0.061 Score=44.20 Aligned_cols=23 Identities=30% Similarity=0.510 Sum_probs=19.6
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..+|.++||||||+++..++.+.
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~~ 108 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHRF 108 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHhC
Confidence 46999999999999999887543
No 24
>KOG2564|consensus
Probab=94.52 E-value=0.033 Score=47.27 Aligned_cols=17 Identities=29% Similarity=0.554 Sum_probs=14.7
Q ss_pred CccEEEEecChhhHHHH
Q psy18225 142 NAKISIIAHSLGCVIVY 158 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~ 158 (166)
.-+|++|||||||.||-
T Consensus 145 ~~~iilVGHSmGGaIav 161 (343)
T KOG2564|consen 145 PPQIILVGHSMGGAIAV 161 (343)
T ss_pred CCceEEEeccccchhhh
Confidence 34799999999999984
No 25
>PLN02408 phospholipase A1
Probab=94.34 E-value=0.07 Score=46.55 Aligned_cols=36 Identities=25% Similarity=0.451 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
+.+.|.+++.++. +.+|+-..+|.+.||||||.++.
T Consensus 180 ~r~qVl~eI~~ll----~~y~~~~~sI~vTGHSLGGALAt 215 (365)
T PLN02408 180 LQEMVREEIARLL----QSYGDEPLSLTITGHSLGAALAT 215 (365)
T ss_pred HHHHHHHHHHHHH----HhcCCCCceEEEeccchHHHHHH
Confidence 4455555555543 44455456899999999998864
No 26
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=94.25 E-value=0.096 Score=44.08 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=21.0
Q ss_pred CccEEEEecChhhHHHHHhhcCCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGWI 165 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~~ 165 (166)
.-++.++||||||+|+...+.+..
T Consensus 106 ~~p~~l~gHSmGg~Ia~~~~~~~~ 129 (298)
T COG2267 106 GLPVFLLGHSMGGLIALLYLARYP 129 (298)
T ss_pred CCCeEEEEeCcHHHHHHHHHHhCC
Confidence 789999999999999998877653
No 27
>PRK10566 esterase; Provisional
Probab=94.19 E-value=0.13 Score=40.72 Aligned_cols=23 Identities=9% Similarity=0.320 Sum_probs=19.8
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..+|+++|||+||.++..++...
T Consensus 106 ~~~i~v~G~S~Gg~~al~~~~~~ 128 (249)
T PRK10566 106 DDRLAVGGASMGGMTALGIMARH 128 (249)
T ss_pred ccceeEEeecccHHHHHHHHHhC
Confidence 46899999999999999887643
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=94.11 E-value=0.08 Score=39.57 Aligned_cols=21 Identities=24% Similarity=0.510 Sum_probs=18.7
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
.+|.++|||+||.++..++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~ 86 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAAR 86 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccc
Confidence 799999999999999887754
No 29
>PLN02571 triacylglycerol lipase
Probab=94.08 E-value=0.08 Score=46.88 Aligned_cols=37 Identities=24% Similarity=0.472 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 118 EIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 118 ~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
.+.+.|..++.++.+++ |+-.-+|.+.||||||.|+.
T Consensus 205 Sar~qvl~eV~~L~~~y----~~e~~sI~VTGHSLGGALAt 241 (413)
T PLN02571 205 SARDQVLNEVGRLVEKY----KDEEISITICGHSLGAALAT 241 (413)
T ss_pred hHHHHHHHHHHHHHHhc----CcccccEEEeccchHHHHHH
Confidence 35556666666655443 44355899999999998863
No 30
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=93.99 E-value=0.046 Score=45.67 Aligned_cols=45 Identities=20% Similarity=0.315 Sum_probs=34.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcCC
Q psy18225 113 PIYGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 113 p~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..|.+-+.+.+.=.+++-|+.= ..+-.|+||||||+++-|+|-..
T Consensus 114 ~~f~~fL~~~lkP~Ie~~y~~~-------~~~~~i~GhSlGGLfvl~aLL~~ 158 (264)
T COG2819 114 DAFREFLTEQLKPFIEARYRTN-------SERTAIIGHSLGGLFVLFALLTY 158 (264)
T ss_pred HHHHHHHHHhhHHHHhcccccC-------cccceeeeecchhHHHHHHHhcC
Confidence 4577777777777777766432 44589999999999999988554
No 31
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=93.89 E-value=0.1 Score=45.55 Aligned_cols=23 Identities=26% Similarity=0.413 Sum_probs=20.0
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
+.||.||||||||.++.-.|...
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhc
Confidence 56999999999999998877654
No 32
>PRK00870 haloalkane dehalogenase; Provisional
Probab=93.85 E-value=0.099 Score=42.96 Aligned_cols=22 Identities=9% Similarity=0.270 Sum_probs=18.7
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..+|+++|||+||.++..+...
T Consensus 114 ~~~v~lvGhS~Gg~ia~~~a~~ 135 (302)
T PRK00870 114 LTDVTLVCQDWGGLIGLRLAAE 135 (302)
T ss_pred CCCEEEEEEChHHHHHHHHHHh
Confidence 3589999999999999977654
No 33
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=93.84 E-value=0.087 Score=43.59 Aligned_cols=24 Identities=33% Similarity=0.573 Sum_probs=21.7
Q ss_pred CccEEEEecChhhHHHHHhhcCCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGWI 165 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~~ 165 (166)
+.+|.++|||+||=|+-++|.+.+
T Consensus 83 ~~~liLiGHSIGayi~levl~r~~ 106 (266)
T PF10230_consen 83 NVKLILIGHSIGAYIALEVLKRLP 106 (266)
T ss_pred CCcEEEEeCcHHHHHHHHHHHhcc
Confidence 789999999999999999997653
No 34
>PLN02965 Probable pheophorbidase
Probab=93.84 E-value=0.097 Score=41.95 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=19.2
Q ss_pred ccEEEEecChhhHHHHHhhcCC
Q psy18225 143 AKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~~ 164 (166)
.++.++||||||.|+..+..+.
T Consensus 72 ~~~~lvGhSmGG~ia~~~a~~~ 93 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEALCKF 93 (255)
T ss_pred CCEEEEecCcchHHHHHHHHhC
Confidence 4899999999999999887654
No 35
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=93.81 E-value=0.094 Score=40.04 Aligned_cols=39 Identities=21% Similarity=0.376 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcC
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
....+.+.+..+.+.+. ..++.++|||+||.+++-.+..
T Consensus 26 ~~~~~~~~~~~~~~~l~------~~~~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 26 TTDDLAADLEALREALG------IKKINLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp CHHHHHHHHHHHHHHHT------TSSEEEEEETHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhC------CCCeEEEEECCChHHHHHHHHH
Confidence 34556666666666554 3459999999999999866543
No 36
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=93.73 E-value=0.12 Score=40.54 Aligned_cols=22 Identities=18% Similarity=0.388 Sum_probs=18.4
Q ss_pred ccEEEEecChhhHHHHHhhcCC
Q psy18225 143 AKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~~ 164 (166)
.+|.++|||+||.++.-++..+
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~~ 117 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALKY 117 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHhC
Confidence 4699999999999998776543
No 37
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=93.61 E-value=0.16 Score=42.95 Aligned_cols=21 Identities=14% Similarity=0.181 Sum_probs=18.1
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
-++.|+||||||.|+..+...
T Consensus 162 ~~~~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKVHLK 182 (349)
T ss_pred CCEEEEEeccchHHHHHHHHh
Confidence 489999999999999987654
No 38
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=93.55 E-value=0.13 Score=41.85 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=19.1
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
-++|.++|||+||.++..+...+
T Consensus 101 ~~~~~lvGhS~Gg~va~~~a~~~ 123 (294)
T PLN02824 101 GDPAFVICNSVGGVVGLQAAVDA 123 (294)
T ss_pred CCCeEEEEeCHHHHHHHHHHHhC
Confidence 36899999999999998776543
No 39
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=93.52 E-value=0.2 Score=41.80 Aligned_cols=21 Identities=14% Similarity=0.093 Sum_probs=17.1
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
..++.|+||||||.++.-...
T Consensus 133 ~~~i~l~GhSmGG~ia~~~a~ 153 (330)
T PLN02298 133 GLPRFLYGESMGGAICLLIHL 153 (330)
T ss_pred CCCEEEEEecchhHHHHHHHh
Confidence 458999999999999875443
No 40
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=93.52 E-value=0.14 Score=38.75 Aligned_cols=22 Identities=14% Similarity=0.058 Sum_probs=19.0
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..++.++|||+||.++..+...
T Consensus 69 ~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 69 IEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CCeEEEEEeccHHHHHHHHHHh
Confidence 4689999999999999987654
No 41
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=93.44 E-value=0.14 Score=43.33 Aligned_cols=20 Identities=25% Similarity=0.360 Sum_probs=17.2
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
+-++.++||||||.|+.-.+
T Consensus 141 ~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 141 RLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred CCceeEeeccCccHHHHHHH
Confidence 46899999999999987654
No 42
>KOG2369|consensus
Probab=93.40 E-value=0.13 Score=46.14 Aligned_cols=20 Identities=30% Similarity=0.557 Sum_probs=16.5
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
.+||.||+||||+.+.+=-|
T Consensus 181 ~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 181 GKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred CCceEEEecCCccHHHHHHH
Confidence 47999999999999876443
No 43
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.33 E-value=0.12 Score=47.09 Aligned_cols=38 Identities=26% Similarity=0.518 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
..+.|..++.++.+.+....+ +-+|.|.||||||.++.
T Consensus 296 areQVl~eV~rLv~~Yk~~ge--~~SItVTGHSLGGALAt 333 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGE--EVSLTITGHSLGGALAL 333 (525)
T ss_pred hHHHHHHHHHHHHHhccccCC--cceEEEeccCHHHHHHH
Confidence 345566667776666654222 56899999999998863
No 44
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=93.30 E-value=0.14 Score=39.59 Aligned_cols=22 Identities=18% Similarity=0.351 Sum_probs=18.3
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
.++++++|||+||.++.-+...
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~ 100 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALR 100 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHH
Confidence 4689999999999999876543
No 45
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.22 E-value=0.17 Score=42.04 Aligned_cols=21 Identities=24% Similarity=0.251 Sum_probs=17.5
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
..+|.+||||||+.++.-+..
T Consensus 111 ~~~i~lIGhSlGa~vAg~~a~ 131 (275)
T cd00707 111 LENVHLIGHSLGAHVAGFAGK 131 (275)
T ss_pred hHHEEEEEecHHHHHHHHHHH
Confidence 358999999999999876544
No 46
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=93.11 E-value=0.15 Score=41.20 Aligned_cols=22 Identities=14% Similarity=0.292 Sum_probs=18.7
Q ss_pred ccEEEEecChhhHHHHHhhcCC
Q psy18225 143 AKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~~ 164 (166)
+++.++||||||.++..+..++
T Consensus 91 ~~~~LvG~S~GG~va~~~a~~~ 112 (276)
T TIGR02240 91 GQVNAIGVSWGGALAQQFAHDY 112 (276)
T ss_pred CceEEEEECHHHHHHHHHHHHC
Confidence 5799999999999999776543
No 47
>PLN02802 triacylglycerol lipase
Probab=93.10 E-value=0.14 Score=46.38 Aligned_cols=35 Identities=23% Similarity=0.499 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 120 QQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 120 ~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
.+.|.++++++ ++.+|+-+-+|.+.||||||.++.
T Consensus 311 reqVl~eV~~L----l~~Y~~e~~sI~VTGHSLGGALAt 345 (509)
T PLN02802 311 SESVVGEVRRL----MEKYKGEELSITVTGHSLGAALAL 345 (509)
T ss_pred HHHHHHHHHHH----HHhCCCCcceEEEeccchHHHHHH
Confidence 34444444444 344455456899999999998875
No 48
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=93.00 E-value=0.19 Score=39.47 Aligned_cols=23 Identities=9% Similarity=0.050 Sum_probs=20.2
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..+|.|+|||+||.+++.+.+..
T Consensus 94 ~~~i~l~G~S~Gg~~a~~~a~~~ 116 (212)
T TIGR01840 94 PNRVYVTGLSAGGGMTAVLGCTY 116 (212)
T ss_pred hhheEEEEECHHHHHHHHHHHhC
Confidence 46899999999999999988754
No 49
>KOG1454|consensus
Probab=92.91 E-value=0.17 Score=43.17 Aligned_cols=23 Identities=22% Similarity=0.472 Sum_probs=19.7
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..+++++||||||++++++-+.+
T Consensus 127 ~~~~~lvghS~Gg~va~~~Aa~~ 149 (326)
T KOG1454|consen 127 VEPVSLVGHSLGGIVALKAAAYY 149 (326)
T ss_pred CcceEEEEeCcHHHHHHHHHHhC
Confidence 55699999999999999887654
No 50
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=92.78 E-value=0.19 Score=47.94 Aligned_cols=21 Identities=33% Similarity=0.593 Sum_probs=18.2
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
..+|+++||||||++.-..+.
T Consensus 554 ~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 554 GSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred CCcEEEEecCHHHHHHHHHHH
Confidence 469999999999999877665
No 51
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=92.59 E-value=0.44 Score=37.80 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcc-EEEEecChhhHHHHHhh
Q psy18225 122 GLTDELNRLYSMFVARNPNHNAK-ISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 122 ~v~~~lN~~y~~f~~~~p~F~G~-VsiigHSLGsvI~~DiL 161 (166)
.+.+.++.+.+...+ +|+ +.|+|.|-|+.++-=+|
T Consensus 85 ~~~~sl~~l~~~i~~-----~GPfdGvlGFSQGA~lAa~ll 120 (212)
T PF03959_consen 85 GLDESLDYLRDYIEE-----NGPFDGVLGFSQGAALAALLL 120 (212)
T ss_dssp --HHHHHHHHHHHHH-----H---SEEEEETHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-----cCCeEEEEeecHHHHHHHHHH
Confidence 344455555544444 343 67999999999987555
No 52
>PLN02162 triacylglycerol lipase
Probab=92.52 E-value=0.2 Score=45.02 Aligned_cols=25 Identities=36% Similarity=0.391 Sum_probs=19.5
Q ss_pred HHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 132 SMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 132 ~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
..+++.+| +.+|.+.||||||.++.
T Consensus 269 ~~lL~k~p--~~kliVTGHSLGGALAt 293 (475)
T PLN02162 269 RDKLARNK--NLKYILTGHSLGGALAA 293 (475)
T ss_pred HHHHHhCC--CceEEEEecChHHHHHH
Confidence 34455567 56899999999999875
No 53
>PRK10349 carboxylesterase BioH; Provisional
Probab=92.39 E-value=0.099 Score=41.63 Aligned_cols=22 Identities=18% Similarity=0.226 Sum_probs=18.9
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..++.++|||+||.|+..+...
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALT 94 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHh
Confidence 4689999999999999987654
No 54
>PRK11460 putative hydrolase; Provisional
Probab=92.30 E-value=0.36 Score=38.79 Aligned_cols=23 Identities=13% Similarity=0.345 Sum_probs=19.8
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..+|.++|||+|+.+++.++...
T Consensus 102 ~~~i~l~GfS~Gg~~al~~a~~~ 124 (232)
T PRK11460 102 ASATALIGFSQGAIMALEAVKAE 124 (232)
T ss_pred hhhEEEEEECHHHHHHHHHHHhC
Confidence 46899999999999999987543
No 55
>PLN00413 triacylglycerol lipase
Probab=92.04 E-value=0.19 Score=45.26 Aligned_cols=24 Identities=29% Similarity=0.505 Sum_probs=18.8
Q ss_pred HHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 133 MFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 133 ~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
++++.+| +.+|.+.||||||.++.
T Consensus 276 ~ll~~~p--~~kliVTGHSLGGALAt 299 (479)
T PLN00413 276 EIFDQNP--TSKFILSGHSLGGALAI 299 (479)
T ss_pred HHHHHCC--CCeEEEEecCHHHHHHH
Confidence 3444556 77899999999999875
No 56
>PRK03592 haloalkane dehalogenase; Provisional
Probab=91.93 E-value=0.3 Score=39.81 Aligned_cols=22 Identities=14% Similarity=0.395 Sum_probs=18.8
Q ss_pred ccEEEEecChhhHHHHHhhcCC
Q psy18225 143 AKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~~ 164 (166)
.+++++|||+||.|+......+
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a~~~ 114 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWAARH 114 (295)
T ss_pred CCeEEEEECHHHHHHHHHHHhC
Confidence 5899999999999999776544
No 57
>PLN02753 triacylglycerol lipase
Probab=91.91 E-value=0.26 Score=44.94 Aligned_cols=39 Identities=21% Similarity=0.372 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
+.+.|..++.++.+++.. .++=+.+|.+.||||||.|+.
T Consensus 289 ~reQVl~eVkrLl~~Y~~-e~~~~~sItVTGHSLGGALAt 327 (531)
T PLN02753 289 AREQILTEVKRLVEEHGD-DDDSDLSITVTGHSLGGALAI 327 (531)
T ss_pred HHHHHHHHHHHHHHHccc-ccCCCceEEEEccCHHHHHHH
Confidence 444455555544444421 111257999999999998864
No 58
>PLN02934 triacylglycerol lipase
Probab=91.85 E-value=0.26 Score=44.81 Aligned_cols=26 Identities=27% Similarity=0.445 Sum_probs=19.8
Q ss_pred HHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 131 YSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 131 y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
.+++++.+| +.+|.+.||||||.++.
T Consensus 311 lk~ll~~~p--~~kIvVTGHSLGGALAt 336 (515)
T PLN02934 311 LKSLLKEHK--NAKFVVTGHSLGGALAI 336 (515)
T ss_pred HHHHHHHCC--CCeEEEeccccHHHHHH
Confidence 334445566 57899999999999876
No 59
>PRK11071 esterase YqiA; Provisional
Probab=91.82 E-value=0.3 Score=38.16 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=19.1
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..++.++||||||.++..+....
T Consensus 60 ~~~~~lvG~S~Gg~~a~~~a~~~ 82 (190)
T PRK11071 60 GDPLGLVGSSLGGYYATWLSQCF 82 (190)
T ss_pred CCCeEEEEECHHHHHHHHHHHHc
Confidence 35899999999999999776543
No 60
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=91.79 E-value=0.12 Score=39.45 Aligned_cols=22 Identities=14% Similarity=0.219 Sum_probs=18.6
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
.+++.++|||+||.++..+...
T Consensus 64 ~~~~~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 64 PDPAIWLGWSLGGLVALHIAAT 85 (245)
T ss_pred CCCeEEEEEcHHHHHHHHHHHH
Confidence 3689999999999999876654
No 61
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=91.74 E-value=0.31 Score=41.63 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=17.8
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
..++.++||||||.+++-+..
T Consensus 154 ~~~~~lvGhS~Gg~ia~~~a~ 174 (360)
T PLN02679 154 QKPTVLIGNSVGSLACVIAAS 174 (360)
T ss_pred CCCeEEEEECHHHHHHHHHHH
Confidence 468999999999999886654
No 62
>PLN02719 triacylglycerol lipase
Probab=91.74 E-value=0.27 Score=44.68 Aligned_cols=39 Identities=21% Similarity=0.372 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
+.+.|..++.++.+++... ++-.-+|.+.||||||.|+.
T Consensus 275 aReQVl~eV~rL~~~Ypd~-~ge~~sItVTGHSLGGALAt 313 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDE-EGEELSITVTGHSLGGALAV 313 (518)
T ss_pred HHHHHHHHHHHHHHHCCcc-cCCcceEEEecCcHHHHHHH
Confidence 4555555555554444210 11256899999999998863
No 63
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=91.74 E-value=0.55 Score=36.62 Aligned_cols=46 Identities=35% Similarity=0.527 Sum_probs=34.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcC
Q psy18225 115 YGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 115 y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
|.+ -+..=+..+++..+.+.++-| +.++.|+|+|.|+.++-|+|+.
T Consensus 56 y~~-S~~~G~~~~~~~i~~~~~~CP--~~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 56 YGD-SVAAGVANLVRLIEEYAARCP--NTKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp CHH-HHHHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred ccc-cHHHHHHHHHHHHHHHHHhCC--CCCEEEEecccccHHHHHHHHh
Confidence 543 334445555666666777778 7899999999999999999875
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=91.66 E-value=0.28 Score=35.07 Aligned_cols=22 Identities=27% Similarity=0.477 Sum_probs=19.4
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..+|.++|||+|+.++..++..
T Consensus 60 ~~~i~l~G~S~Gg~~a~~~~~~ 81 (145)
T PF12695_consen 60 PDRIILIGHSMGGAIAANLAAR 81 (145)
T ss_dssp CCEEEEEEETHHHHHHHHHHHH
T ss_pred CCcEEEEEEccCcHHHHHHhhh
Confidence 5799999999999999987753
No 65
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=91.54 E-value=0.42 Score=39.15 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=22.1
Q ss_pred HHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhh
Q psy18225 127 LNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 127 lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL 161 (166)
+..++..+.+..|+. .+|.++|||+||.++.-..
T Consensus 85 ~~~~~~~l~~~~~g~-~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 85 IAAAIDAFREAAPHL-RRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHHhhCCCC-CcEEEEEECHHHHHHHHHh
Confidence 334444444333432 4699999999999987553
No 66
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=91.40 E-value=0.3 Score=41.30 Aligned_cols=22 Identities=9% Similarity=0.296 Sum_probs=18.7
Q ss_pred cc-EEEEecChhhHHHHHhhcCC
Q psy18225 143 AK-ISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 143 G~-VsiigHSLGsvI~~DiL~~~ 164 (166)
.+ +.|+||||||.|+..+...+
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHHC
Confidence 46 99999999999999876554
No 67
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=91.15 E-value=0.41 Score=44.45 Aligned_cols=21 Identities=19% Similarity=0.536 Sum_probs=18.8
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
+-||.|+||||||.+++..|.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHH
Confidence 359999999999999998886
No 68
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=91.09 E-value=0.14 Score=41.01 Aligned_cols=23 Identities=13% Similarity=0.287 Sum_probs=19.4
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..+++++||||||.+++.....+
T Consensus 100 ~~~~~lvG~S~Gg~ia~~~a~~~ 122 (282)
T TIGR03343 100 IEKAHLVGNSMGGATALNFALEY 122 (282)
T ss_pred CCCeeEEEECchHHHHHHHHHhC
Confidence 35899999999999999876543
No 69
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=91.08 E-value=0.57 Score=38.97 Aligned_cols=22 Identities=14% Similarity=0.359 Sum_probs=18.9
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..+|.++||||||.++..+...
T Consensus 98 ~~~v~LvG~SmGG~vAl~~A~~ 119 (266)
T TIGR03101 98 HPPVTLWGLRLGALLALDAANP 119 (266)
T ss_pred CCCEEEEEECHHHHHHHHHHHh
Confidence 4689999999999999987654
No 70
>PRK03204 haloalkane dehalogenase; Provisional
Probab=90.91 E-value=0.4 Score=39.40 Aligned_cols=22 Identities=14% Similarity=0.092 Sum_probs=18.7
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..++.++|||+||.|+..+...
T Consensus 100 ~~~~~lvG~S~Gg~va~~~a~~ 121 (286)
T PRK03204 100 LDRYLSMGQDWGGPISMAVAVE 121 (286)
T ss_pred CCCEEEEEECccHHHHHHHHHh
Confidence 3689999999999999887654
No 71
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.79 E-value=0.23 Score=41.28 Aligned_cols=24 Identities=21% Similarity=0.482 Sum_probs=20.8
Q ss_pred hcCCCCCccEEEEecChhhHHHHHhh
Q psy18225 136 ARNPNHNAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 136 ~~~p~F~G~VsiigHSLGsvI~~DiL 161 (166)
+..| .|++.++|+|+||.++||+-
T Consensus 60 ~~QP--~GPy~L~G~S~GG~vA~evA 83 (257)
T COG3319 60 RVQP--EGPYVLLGWSLGGAVAFEVA 83 (257)
T ss_pred HhCC--CCCEEEEeeccccHHHHHHH
Confidence 3356 89999999999999999974
No 72
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=90.51 E-value=0.43 Score=37.71 Aligned_cols=21 Identities=24% Similarity=0.358 Sum_probs=17.4
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
.++.++|||+||.++.-....
T Consensus 95 ~~~~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 95 SPDGVIGHSAGAAIALRLALD 115 (278)
T ss_pred CCceEEEECccHHHHHHHHHh
Confidence 468999999999999876544
No 73
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=90.49 E-value=0.77 Score=37.09 Aligned_cols=46 Identities=11% Similarity=0.190 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcCC
Q psy18225 118 EIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 118 ~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
+..+.--..+-++++.|++++++ .-++.|.|||=||.++-.||..+
T Consensus 71 ~a~~~ay~DV~~AF~~yL~~~n~-GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 71 KAFDLAYSDVRAAFDYYLANYNN-GRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHhhHHHHHHHHHHHHHhcCC-CCCEEEEEeChHHHHHHHHHHHH
Confidence 33444445566788889887752 34999999999999999998754
No 74
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=90.28 E-value=0.67 Score=40.56 Aligned_cols=20 Identities=20% Similarity=0.305 Sum_probs=16.7
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
..++.++||||||.++.-..
T Consensus 207 ~~~i~lvGhSmGG~ial~~a 226 (395)
T PLN02652 207 GVPCFLFGHSTGGAVVLKAA 226 (395)
T ss_pred CCCEEEEEECHHHHHHHHHH
Confidence 35899999999999997544
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=89.99 E-value=0.6 Score=38.65 Aligned_cols=42 Identities=17% Similarity=0.233 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcCC
Q psy18225 117 SEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 117 ~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
+.+.+.+...+.+.|... + ..++.|+|||+||.++.-+..+.
T Consensus 123 ~~~~~~l~~~i~~~~~~~---~---~~~~~i~G~S~GG~~a~~~a~~~ 164 (283)
T PLN02442 123 DYVVKELPKLLSDNFDQL---D---TSRASIFGHSMGGHGALTIYLKN 164 (283)
T ss_pred hhHHHHHHHHHHHHHHhc---C---CCceEEEEEChhHHHHHHHHHhC
Confidence 445666666666655443 2 46799999999999998776653
No 76
>PRK05855 short chain dehydrogenase; Validated
Probab=89.85 E-value=0.57 Score=41.54 Aligned_cols=22 Identities=18% Similarity=0.513 Sum_probs=18.2
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
.+++.++|||+||++++..+..
T Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 93 DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CCcEEEEecChHHHHHHHHHhC
Confidence 4569999999999999876643
No 77
>PRK06489 hypothetical protein; Provisional
Probab=89.80 E-value=0.34 Score=41.18 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=18.1
Q ss_pred ccEE-EEecChhhHHHHHhhcCC
Q psy18225 143 AKIS-IIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 143 G~Vs-iigHSLGsvI~~DiL~~~ 164 (166)
.+++ |+||||||.++.+....+
T Consensus 153 ~~~~~lvG~SmGG~vAl~~A~~~ 175 (360)
T PRK06489 153 KHLRLILGTSMGGMHAWMWGEKY 175 (360)
T ss_pred CceeEEEEECHHHHHHHHHHHhC
Confidence 4665 899999999999887654
No 78
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=89.70 E-value=0.49 Score=37.44 Aligned_cols=37 Identities=30% Similarity=0.577 Sum_probs=28.5
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHH
Q psy18225 111 TSPIYGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYD 159 (166)
Q Consensus 111 ~sp~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~D 159 (166)
..|.+. +=++++.+++|.+ .|++.|||||||++..--
T Consensus 39 ~~P~~~-dWi~~l~~~v~a~-----------~~~~vlVAHSLGc~~v~h 75 (181)
T COG3545 39 EAPVLD-DWIARLEKEVNAA-----------EGPVVLVAHSLGCATVAH 75 (181)
T ss_pred CCCCHH-HHHHHHHHHHhcc-----------CCCeEEEEecccHHHHHH
Confidence 345554 6678889998865 678999999999986543
No 79
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=89.60 E-value=0.56 Score=39.72 Aligned_cols=22 Identities=14% Similarity=0.040 Sum_probs=18.4
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..+|.++|||+||.+++-.+..
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~ 156 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAAL 156 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHh
Confidence 4689999999999999876543
No 80
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=89.58 E-value=0.52 Score=39.74 Aligned_cols=21 Identities=10% Similarity=0.161 Sum_probs=17.7
Q ss_pred cEEEEecChhhHHHHHhhcCC
Q psy18225 144 KISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 144 ~VsiigHSLGsvI~~DiL~~~ 164 (166)
.++++||||||.|+..+...+
T Consensus 139 ~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 139 LHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred ceEEEEECHHHHHHHHHHHHC
Confidence 358999999999999887654
No 81
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=89.44 E-value=0.61 Score=39.01 Aligned_cols=21 Identities=14% Similarity=0.434 Sum_probs=18.0
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
.++.++|||+||.++..+...
T Consensus 197 ~~~~lvG~S~Gg~~a~~~a~~ 217 (371)
T PRK14875 197 ERAHLVGHSMGGAVALRLAAR 217 (371)
T ss_pred ccEEEEeechHHHHHHHHHHh
Confidence 589999999999999876654
No 82
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=89.27 E-value=3.3 Score=33.60 Aligned_cols=103 Identities=15% Similarity=0.127 Sum_probs=58.6
Q ss_pred eEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCeEEEe-eeccCCccccCCccccccchhhhhhHHHhhh
Q psy18225 24 HLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFP-VEWRSSLALDGDIVESITQLNVLNLRHMLNA 102 (166)
Q Consensus 24 hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v~~~p-I~W~~~l~~d~~~~~~it~~~i~~lR~~~~~ 102 (166)
=.|+|+|+|....+ .+|...+.+.+. +-+.+.| +.++..-..+.. +. +..+. +.
T Consensus 28 P~VIv~hei~Gl~~---------~i~~~a~rlA~~------Gy~v~~Pdl~~~~~~~~~~~-----~~---~~~~~--~~ 82 (236)
T COG0412 28 PGVIVLHEIFGLNP---------HIRDVARRLAKA------GYVVLAPDLYGRQGDPTDIE-----DE---PAELE--TG 82 (236)
T ss_pred CEEEEEecccCCch---------HHHHHHHHHHhC------CcEEEechhhccCCCCCccc-----cc---HHHHh--hh
Confidence 58999999996433 255566655543 4577888 777654222111 11 11111 10
Q ss_pred hhhhhhcccCchhhHHHHHHHHHHHHHHHHHHHhcCCC-CCccEEEEecChhhHHHHHhhcC
Q psy18225 103 SAMDIMYYTSPIYGSEIQQGLTDELNRLYSMFVARNPN-HNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 103 ~~~Dvl~y~sp~y~~~I~~~v~~~lN~~y~~f~~~~p~-F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
++...+. ..+...+.. .-.|++++|. -.++|.++|-|+||-+++...+.
T Consensus 83 -----~~~~~~~------~~~~~d~~a-~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 83 -----LVERVDP------AEVLADIDA-ALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred -----hhccCCH------HHHHHHHHH-HHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 2222221 122222222 2346677774 57789999999999999987765
No 83
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=89.22 E-value=0.64 Score=38.44 Aligned_cols=22 Identities=9% Similarity=0.104 Sum_probs=18.6
Q ss_pred ccEEEEecChhhHHHHHhhcCC
Q psy18225 143 AKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~~ 164 (166)
.++.++|||+||.|+..++...
T Consensus 95 ~~~~lvG~S~GG~ia~~~a~~~ 116 (306)
T TIGR01249 95 KNWLVFGGSWGSTLALAYAQTH 116 (306)
T ss_pred CCEEEEEECHHHHHHHHHHHHC
Confidence 5799999999999999876543
No 84
>PRK10985 putative hydrolase; Provisional
Probab=89.17 E-value=0.69 Score=38.79 Aligned_cols=21 Identities=14% Similarity=0.232 Sum_probs=16.2
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
..++.++||||||.|+-=.+.
T Consensus 130 ~~~~~~vG~S~GG~i~~~~~~ 150 (324)
T PRK10985 130 HVPTAAVGYSLGGNMLACLLA 150 (324)
T ss_pred CCCEEEEEecchHHHHHHHHH
Confidence 468999999999987554443
No 85
>PLN02511 hydrolase
Probab=88.99 E-value=0.69 Score=40.13 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=18.6
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
+.++.++||||||.|+...+..
T Consensus 172 ~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 172 SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred CCCEEEEEechhHHHHHHHHHh
Confidence 5789999999999998876653
No 86
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=88.82 E-value=0.43 Score=43.09 Aligned_cols=23 Identities=30% Similarity=0.622 Sum_probs=19.6
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
.+++.++||||||.|+..+...+
T Consensus 273 ~~k~~LVGhSmGG~iAl~~A~~~ 295 (481)
T PLN03087 273 VKSFHIVAHSLGCILALALAVKH 295 (481)
T ss_pred CCCEEEEEECHHHHHHHHHHHhC
Confidence 57999999999999999876543
No 87
>PLN00021 chlorophyllase
Probab=88.74 E-value=0.76 Score=39.02 Aligned_cols=21 Identities=24% Similarity=0.480 Sum_probs=18.6
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
.+|.|+|||+||.+++.+...
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~ 146 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALG 146 (313)
T ss_pred hheEEEEECcchHHHHHHHhh
Confidence 689999999999999987754
No 88
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=88.72 E-value=0.74 Score=37.36 Aligned_cols=31 Identities=23% Similarity=0.404 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHH
Q psy18225 121 QGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 121 ~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
..+..-++++.+.- . . ||-|||||+|+.|+-
T Consensus 60 ~~l~~fI~~Vl~~T-G-----a-kVDIVgHS~G~~iaR 90 (219)
T PF01674_consen 60 KQLRAFIDAVLAYT-G-----A-KVDIVGHSMGGTIAR 90 (219)
T ss_dssp HHHHHHHHHHHHHH-T--------EEEEEETCHHHHHH
T ss_pred HHHHHHHHHHHHhh-C-----C-EEEEEEcCCcCHHHH
Confidence 44455555553322 1 5 999999999999874
No 89
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=88.64 E-value=0.53 Score=38.59 Aligned_cols=23 Identities=17% Similarity=0.120 Sum_probs=19.9
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..++.++|||+||.++..+....
T Consensus 137 ~~~~~~~G~S~GG~~a~~~a~~~ 159 (275)
T TIGR02821 137 GERQGITGHSMGGHGALVIALKN 159 (275)
T ss_pred CCceEEEEEChhHHHHHHHHHhC
Confidence 46899999999999999887654
No 90
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=88.58 E-value=0.56 Score=42.53 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=23.6
Q ss_pred hcCCCCCccEEEEecChhhHHHHHhhcCCC
Q psy18225 136 ARNPNHNAKISIIAHSLGCVIVYDVITGWI 165 (166)
Q Consensus 136 ~~~p~F~G~VsiigHSLGsvI~~DiL~~~~ 165 (166)
+.+|--+|+|.++|||+||.+++-+....+
T Consensus 90 ~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~ 119 (550)
T TIGR00976 90 AKQPWCDGNVGMLGVSYLAVTQLLAAVLQP 119 (550)
T ss_pred HhCCCCCCcEEEEEeChHHHHHHHHhccCC
Confidence 445544899999999999999997766543
No 91
>PLN02847 triacylglycerol lipase
Probab=87.98 E-value=0.82 Score=42.45 Aligned_cols=21 Identities=38% Similarity=0.507 Sum_probs=16.5
Q ss_pred hcCCCCCccEEEEecChhhHHHH
Q psy18225 136 ARNPNHNAKISIIAHSLGCVIVY 158 (166)
Q Consensus 136 ~~~p~F~G~VsiigHSLGsvI~~ 158 (166)
+.+| +.+|-++|||||+-++-
T Consensus 246 ~~~P--dYkLVITGHSLGGGVAA 266 (633)
T PLN02847 246 DEYP--DFKIKIVGHSLGGGTAA 266 (633)
T ss_pred HHCC--CCeEEEeccChHHHHHH
Confidence 4466 57999999999997653
No 92
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=87.87 E-value=1.3 Score=38.43 Aligned_cols=39 Identities=13% Similarity=0.376 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhc
Q psy18225 124 TDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 124 ~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~ 162 (166)
++++-.+..+.+.+...=+-+|.+||||||+.+.|..|.
T Consensus 201 A~~aG~~LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~ 239 (345)
T PF05277_consen 201 AEKAGKVLADALLSRNQGERPVTLVGHSLGARVIYYCLL 239 (345)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeecccHHHHHHHHH
Confidence 344444455554433222557999999999999998874
No 93
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=87.58 E-value=1 Score=40.30 Aligned_cols=20 Identities=15% Similarity=0.102 Sum_probs=17.0
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
-.+|++||||||+.|+--+-
T Consensus 118 l~~VhLIGHSLGAhIAg~ag 137 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAG 137 (442)
T ss_pred CCcEEEEEECHHHHHHHHHH
Confidence 36899999999999987654
No 94
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=87.57 E-value=0.81 Score=37.15 Aligned_cols=17 Identities=29% Similarity=0.346 Sum_probs=14.7
Q ss_pred CccEEEEecChhhHHHH
Q psy18225 142 NAKISIIAHSLGCVIVY 158 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~ 158 (166)
.++|.+.|||+||-++-
T Consensus 83 ~~~i~v~GHSkGGnLA~ 99 (224)
T PF11187_consen 83 PGKIYVTGHSKGGNLAQ 99 (224)
T ss_pred CCCEEEEEechhhHHHH
Confidence 56899999999998764
No 95
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.43 E-value=7.5 Score=34.15 Aligned_cols=21 Identities=24% Similarity=0.548 Sum_probs=18.0
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
..+|.|+|||||+=++-..|-
T Consensus 190 ~~~I~ilAHSMGtwl~~e~Lr 210 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALR 210 (377)
T ss_pred CceEEEEEecchHHHHHHHHH
Confidence 679999999999988777663
No 96
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=87.01 E-value=1.3 Score=38.71 Aligned_cols=21 Identities=14% Similarity=0.289 Sum_probs=18.0
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
.++.++||||||.++..++..
T Consensus 176 ~~~~lvGhS~GG~la~~~a~~ 196 (402)
T PLN02894 176 SNFILLGHSFGGYVAAKYALK 196 (402)
T ss_pred CCeEEEEECHHHHHHHHHHHh
Confidence 489999999999999876654
No 97
>PRK07581 hypothetical protein; Validated
Probab=86.74 E-value=0.47 Score=39.72 Aligned_cols=22 Identities=14% Similarity=0.339 Sum_probs=18.2
Q ss_pred cc-EEEEecChhhHHHHHhhcCC
Q psy18225 143 AK-ISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 143 G~-VsiigHSLGsvI~~DiL~~~ 164 (166)
.+ +.|+||||||.+++.+...+
T Consensus 123 ~~~~~lvG~S~GG~va~~~a~~~ 145 (339)
T PRK07581 123 ERLALVVGWSMGAQQTYHWAVRY 145 (339)
T ss_pred CceEEEEEeCHHHHHHHHHHHHC
Confidence 57 57999999999999876654
No 98
>PLN02578 hydrolase
Probab=86.53 E-value=1.3 Score=37.70 Aligned_cols=23 Identities=17% Similarity=0.390 Sum_probs=18.9
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
..++.++|||+||.|+..+..+.
T Consensus 151 ~~~~~lvG~S~Gg~ia~~~A~~~ 173 (354)
T PLN02578 151 KEPAVLVGNSLGGFTALSTAVGY 173 (354)
T ss_pred cCCeEEEEECHHHHHHHHHHHhC
Confidence 35799999999999998876543
No 99
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=85.59 E-value=1.9 Score=32.20 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=18.6
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
.+++.++|||+|+.++++...
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHH
Confidence 678999999999999987754
No 100
>KOG4569|consensus
Probab=85.52 E-value=0.99 Score=38.72 Aligned_cols=31 Identities=42% Similarity=0.724 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHH
Q psy18225 121 QGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIV 157 (166)
Q Consensus 121 ~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~ 157 (166)
..+.+.++++...+ | +-+|-+.||||||.|+
T Consensus 155 ~~~~~~~~~L~~~~----~--~~~i~vTGHSLGgAlA 185 (336)
T KOG4569|consen 155 SGLDAELRRLIELY----P--NYSIWVTGHSLGGALA 185 (336)
T ss_pred HHHHHHHHHHHHhc----C--CcEEEEecCChHHHHH
Confidence 35555555555544 3 7899999999999876
No 101
>KOG3724|consensus
Probab=85.24 E-value=1.4 Score=42.21 Aligned_cols=20 Identities=20% Similarity=0.536 Sum_probs=15.9
Q ss_pred ccEEEEecChhhHHHHHhhc
Q psy18225 143 AKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~ 162 (166)
-.|.|+||||||+++==.++
T Consensus 182 ~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 182 HSVILVGHSMGGIVARATLT 201 (973)
T ss_pred ceEEEEeccchhHHHHHHHh
Confidence 35999999999999865443
No 102
>KOG3101|consensus
Probab=85.22 E-value=0.61 Score=38.38 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhH
Q psy18225 118 EIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCV 155 (166)
Q Consensus 118 ~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsv 155 (166)
.|++++-+.+|. ..-|-=-++++|+||||||-
T Consensus 122 Yv~kELp~~l~~------~~~pld~~k~~IfGHSMGGh 153 (283)
T KOG3101|consen 122 YVVKELPQLLNS------ANVPLDPLKVGIFGHSMGGH 153 (283)
T ss_pred HHHHHHHHHhcc------ccccccchhcceeccccCCC
Confidence 455555555553 11122257899999999974
No 103
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=84.74 E-value=1.4 Score=39.45 Aligned_cols=37 Identities=8% Similarity=0.280 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCC-CccEEEEecChhhHHH
Q psy18225 121 QGLTDELNRLYSMFVARNPNH-NAKISIIAHSLGCVIV 157 (166)
Q Consensus 121 ~~v~~~lN~~y~~f~~~~p~F-~G~VsiigHSLGsvI~ 157 (166)
+.++.++-+....|.+++|.| +.++.|+|||.||..+
T Consensus 148 ~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~ 185 (462)
T PTZ00472 148 SEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYA 185 (462)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhH
Confidence 456667777778888888988 7899999999999743
No 104
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=84.56 E-value=1.7 Score=37.37 Aligned_cols=21 Identities=10% Similarity=0.273 Sum_probs=17.2
Q ss_pred cc-EEEEecChhhHHHHHhhcC
Q psy18225 143 AK-ISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~-VsiigHSLGsvI~~DiL~~ 163 (166)
++ +.++||||||.+++.+...
T Consensus 146 ~~~~~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 146 TRLAAVVGGSMGGMQALEWAID 167 (379)
T ss_pred CCceEEEEECHHHHHHHHHHHh
Confidence 46 5899999999999876554
No 105
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=84.05 E-value=1.5 Score=45.12 Aligned_cols=23 Identities=17% Similarity=0.365 Sum_probs=19.6
Q ss_pred CccEEEEecChhhHHHHHhhcCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
.+++.++||||||.|++.+....
T Consensus 1444 ~~~v~LvGhSmGG~iAl~~A~~~ 1466 (1655)
T PLN02980 1444 PGKVTLVGYSMGARIALYMALRF 1466 (1655)
T ss_pred CCCEEEEEECHHHHHHHHHHHhC
Confidence 46899999999999999876543
No 106
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=84.02 E-value=1.6 Score=32.36 Aligned_cols=35 Identities=20% Similarity=0.371 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcCC
Q psy18225 124 TDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 124 ~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
+..+..++..+. ..++.++|||+||.++.......
T Consensus 75 ~~~~~~~~~~~~------~~~~~l~G~S~Gg~~~~~~~~~~ 109 (282)
T COG0596 75 ADDLAALLDALG------LEKVVLVGHSMGGAVALALALRH 109 (282)
T ss_pred HHHHHHHHHHhC------CCceEEEEecccHHHHHHHHHhc
Confidence 444455544332 23499999999999998776544
No 107
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=83.51 E-value=16 Score=32.50 Aligned_cols=52 Identities=17% Similarity=0.088 Sum_probs=36.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCCc--cEEEEecChhhHHHHHhhcCCCC
Q psy18225 113 PIYGSEIQQGLTDELNRLYSMFVARNPNHNA--KISIIAHSLGCVIVYDVITGWIP 166 (166)
Q Consensus 113 p~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G--~VsiigHSLGsvI~~DiL~~~~~ 166 (166)
..|+..=+-..+.-+|.+..... +-|+|+| +|-.+|+|-||-|++ +..+..|
T Consensus 153 ~EYQN~GIMqAiD~INAl~~l~k-~~~~~~~~lp~I~~G~s~G~yla~-l~~k~aP 206 (403)
T PF11144_consen 153 GEYQNFGIMQAIDIINALLDLKK-IFPKNGGGLPKIYIGSSHGGYLAH-LCAKIAP 206 (403)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHH-hhhcccCCCcEEEEecCcHHHHHH-HHHhhCc
Confidence 44554434455677887765543 3677888 999999999999998 4445555
No 108
>PRK13604 luxD acyl transferase; Provisional
Probab=83.49 E-value=2 Score=36.72 Aligned_cols=18 Identities=39% Similarity=0.652 Sum_probs=15.6
Q ss_pred ccEEEEecChhhHHHHHh
Q psy18225 143 AKISIIAHSLGCVIVYDV 160 (166)
Q Consensus 143 G~VsiigHSLGsvI~~Di 160 (166)
.+|.|+||||||.+++-+
T Consensus 108 ~~I~LiG~SmGgava~~~ 125 (307)
T PRK13604 108 NNLGLIAASLSARIAYEV 125 (307)
T ss_pred CceEEEEECHHHHHHHHH
Confidence 579999999999998743
No 109
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=83.39 E-value=1.1 Score=34.80 Aligned_cols=20 Identities=30% Similarity=0.650 Sum_probs=17.5
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
++++-+||||||.+.+--.|
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHH
T ss_pred CCCeEEEEeCHHHHHHHHHH
Confidence 67899999999999887766
No 110
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=83.39 E-value=2.6 Score=35.53 Aligned_cols=84 Identities=13% Similarity=0.237 Sum_probs=43.3
Q ss_pred Ee-eeccCCccccCCccccc-cchhhhhhHHHhhhhhhhhhcccCchhh---HHHHHHHHHHHHHHHHH---HHhcCCCC
Q psy18225 70 FP-VEWRSSLALDGDIVESI-TQLNVLNLRHMLNASAMDIMYYTSPIYG---SEIQQGLTDELNRLYSM---FVARNPNH 141 (166)
Q Consensus 70 ~p-I~W~~~l~~d~~~~~~i-t~~~i~~lR~~~~~~~~Dvl~y~sp~y~---~~I~~~v~~~lN~~y~~---f~~~~p~F 141 (166)
+| |-||-- -|.. ++.++..+.+++....-++..|+-.... +...+.....+|.-.+. -++++|.+
T Consensus 6 ~PvViwHGm-------GD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L 78 (279)
T PF02089_consen 6 LPVVIWHGM-------GDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPEL 78 (279)
T ss_dssp --EEEE--T-------T--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG
T ss_pred CcEEEEEcC-------ccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChhh
Confidence 46 778742 2232 2335566666666555556556554432 22344444445543333 34678989
Q ss_pred CccEEEEecChhhHHHHHh
Q psy18225 142 NAKISIIAHSLGCVIVYDV 160 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~Di 160 (166)
..-+.+||+|=||.++==+
T Consensus 79 ~~G~~~IGfSQGgl~lRa~ 97 (279)
T PF02089_consen 79 ANGFNAIGFSQGGLFLRAY 97 (279)
T ss_dssp TT-EEEEEETCHHHHHHHH
T ss_pred hcceeeeeeccccHHHHHH
Confidence 8889999999999987433
No 111
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=82.37 E-value=1.9 Score=37.64 Aligned_cols=23 Identities=13% Similarity=0.286 Sum_probs=18.5
Q ss_pred CccEE-EEecChhhHHHHHhhcCC
Q psy18225 142 NAKIS-IIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 142 ~G~Vs-iigHSLGsvI~~DiL~~~ 164 (166)
-.+++ ++||||||.+++.....+
T Consensus 159 i~~~~~vvG~SmGG~ial~~a~~~ 182 (389)
T PRK06765 159 IARLHAVMGPSMGGMQAQEWAVHY 182 (389)
T ss_pred CCCceEEEEECHHHHHHHHHHHHC
Confidence 34676 999999999999876544
No 112
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=82.01 E-value=1.2 Score=36.99 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcC
Q psy18225 118 EIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 118 ~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
+-+..|...|.+-|. | -++-+||||+|+++++.-|.+
T Consensus 87 ~wl~~vl~~L~~~Y~-~--------~~~N~VGHSmGg~~~~~yl~~ 123 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYH-F--------KKFNLVGHSMGGLSWTYYLEN 123 (255)
T ss_dssp HHHHHHHHHHHHCC-----------SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-C--------CEEeEEEECccHHHHHHHHHH
Confidence 345666666665554 2 379999999999998876643
No 113
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=81.66 E-value=2.9 Score=32.94 Aligned_cols=16 Identities=25% Similarity=0.326 Sum_probs=14.0
Q ss_pred cEEEEecChhhHHHHH
Q psy18225 144 KISIIAHSLGCVIVYD 159 (166)
Q Consensus 144 ~VsiigHSLGsvI~~D 159 (166)
.+.|||+||||-.+.=
T Consensus 60 ~~~liGSSlGG~~A~~ 75 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATY 75 (187)
T ss_pred CeEEEEEChHHHHHHH
Confidence 3999999999998873
No 114
>PLN02872 triacylglycerol lipase
Probab=81.35 E-value=3.3 Score=36.39 Aligned_cols=19 Identities=32% Similarity=0.580 Sum_probs=16.6
Q ss_pred ccEEEEecChhhHHHHHhh
Q psy18225 143 AKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL 161 (166)
.+|.++|||+||.+++=++
T Consensus 160 ~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 160 SKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred CceEEEEECHHHHHHHHHh
Confidence 5899999999999998444
No 115
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=80.26 E-value=4.3 Score=33.75 Aligned_cols=15 Identities=33% Similarity=0.620 Sum_probs=12.1
Q ss_pred ccEEEEecChhhHHH
Q psy18225 143 AKISIIAHSLGCVIV 157 (166)
Q Consensus 143 G~VsiigHSLGsvI~ 157 (166)
=++.-+|||||+.+-
T Consensus 90 lP~~~vGHSlGcklh 104 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLH 104 (250)
T ss_pred CCeeeeecccchHHH
Confidence 367889999998754
No 116
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=79.01 E-value=2.8 Score=38.42 Aligned_cols=16 Identities=6% Similarity=0.385 Sum_probs=14.4
Q ss_pred CccEEEEecChhhHHH
Q psy18225 142 NAKISIIAHSLGCVIV 157 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~ 157 (166)
..+|.++|||+||.++
T Consensus 261 ~~kv~lvG~cmGGtl~ 276 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLL 276 (532)
T ss_pred CCCeEEEEECcCcHHH
Confidence 5689999999999985
No 117
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=78.11 E-value=3.7 Score=32.26 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=18.6
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
..++.++|||.||+.+=-.+..
T Consensus 108 ~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 108 DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CCCEEEEEecchhHHHHHHhhh
Confidence 6799999999999998766654
No 118
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=76.61 E-value=6.5 Score=30.63 Aligned_cols=31 Identities=13% Similarity=0.278 Sum_probs=24.3
Q ss_pred HHhcCCC-CCccEEEEecChhhHHHHHhhcCC
Q psy18225 134 FVARNPN-HNAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 134 f~~~~p~-F~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
+++.+|. -.++|.++|.|+||-+++.+.+..
T Consensus 88 ~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~ 119 (218)
T PF01738_consen 88 YLRAQPEVDPGKIGVVGFCWGGKLALLLAARD 119 (218)
T ss_dssp HHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT
T ss_pred HHHhccccCCCcEEEEEEecchHHhhhhhhhc
Confidence 4455663 379999999999999999876654
No 119
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=76.57 E-value=1.5 Score=34.69 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcC
Q psy18225 115 YGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 115 y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
|.+.+.++|...+.+.|.... ++ ..|.|+||||..+.-+.-+
T Consensus 94 ~~~~l~~el~p~i~~~~~~~~------~~-~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 94 YETFLTEELIPYIEANYRTDP------DR-RAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp HHHHHHTHHHHHHHHHSSEEE------CC-EEEEEETHHHHHHHHHHHH
T ss_pred cceehhccchhHHHHhccccc------ce-eEEeccCCCcHHHHHHHHh
Confidence 445666777776665553221 22 9999999999999876543
No 120
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=76.29 E-value=4.5 Score=35.32 Aligned_cols=21 Identities=14% Similarity=0.148 Sum_probs=17.9
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
.++.++|||+||.|+..+...
T Consensus 197 ~~~~LvG~s~GG~ia~~~a~~ 217 (383)
T PLN03084 197 DKVSLVVQGYFSPPVVKYASA 217 (383)
T ss_pred CCceEEEECHHHHHHHHHHHh
Confidence 479999999999999877654
No 121
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=75.93 E-value=3.3 Score=36.38 Aligned_cols=29 Identities=7% Similarity=0.195 Sum_probs=21.6
Q ss_pred HHhcCCCC-CccEEEEecChhhHHHHHhhc
Q psy18225 134 FVARNPNH-NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 134 f~~~~p~F-~G~VsiigHSLGsvI~~DiL~ 162 (166)
++...|.. ..+|.++|||+||.++.-+..
T Consensus 255 ~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~ 284 (414)
T PRK05077 255 ALPNVPWVDHTRVAAFGFRFGANVAVRLAY 284 (414)
T ss_pred HHHhCcccCcccEEEEEEChHHHHHHHHHH
Confidence 44444544 479999999999999886654
No 122
>KOG4540|consensus
Probab=75.73 E-value=2.9 Score=35.95 Aligned_cols=17 Identities=41% Similarity=0.585 Sum_probs=16.1
Q ss_pred CccEEEEecChhhHHHH
Q psy18225 142 NAKISIIAHSLGCVIVY 158 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~ 158 (166)
++++-+-||||||.|+.
T Consensus 275 da~iwlTGHSLGGa~As 291 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIAS 291 (425)
T ss_pred CceEEEeccccchHHHH
Confidence 89999999999999986
No 123
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=75.73 E-value=2.9 Score=35.95 Aligned_cols=17 Identities=41% Similarity=0.585 Sum_probs=16.1
Q ss_pred CccEEEEecChhhHHHH
Q psy18225 142 NAKISIIAHSLGCVIVY 158 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~ 158 (166)
++++-+-||||||.|+.
T Consensus 275 da~iwlTGHSLGGa~As 291 (425)
T COG5153 275 DARIWLTGHSLGGAIAS 291 (425)
T ss_pred CceEEEeccccchHHHH
Confidence 89999999999999986
No 124
>PLN02606 palmitoyl-protein thioesterase
Probab=73.74 E-value=5.3 Score=34.20 Aligned_cols=40 Identities=15% Similarity=0.151 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhh
Q psy18225 121 QGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 121 ~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL 161 (166)
..+-+|+..+.++..+ .|.-..-+.+||+|=||.++==++
T Consensus 74 ~~~~~Qv~~vce~l~~-~~~L~~G~naIGfSQGglflRa~i 113 (306)
T PLN02606 74 MPLRQQASIACEKIKQ-MKELSEGYNIVAESQGNLVARGLI 113 (306)
T ss_pred cCHHHHHHHHHHHHhc-chhhcCceEEEEEcchhHHHHHHH
Confidence 4455666666555544 565555599999999999875443
No 125
>KOG3975|consensus
Probab=73.68 E-value=6.2 Score=33.25 Aligned_cols=21 Identities=38% Similarity=0.717 Sum_probs=18.9
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
+-||.|+|||.||-+..-+|-
T Consensus 109 ~~ki~iiGHSiGaYm~Lqil~ 129 (301)
T KOG3975|consen 109 DRKIYIIGHSIGAYMVLQILP 129 (301)
T ss_pred CCEEEEEecchhHHHHHHHhh
Confidence 889999999999999887775
No 126
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=73.22 E-value=5.3 Score=34.10 Aligned_cols=24 Identities=29% Similarity=0.440 Sum_probs=17.0
Q ss_pred CccEEEEecChhhHHHHHhhcCCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGWI 165 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~~ 165 (166)
.++|.|+|||-|+--+..-|++.+
T Consensus 107 ~~kIVLmGHSTGcQdvl~Yl~~~~ 130 (303)
T PF08538_consen 107 REKIVLMGHSTGCQDVLHYLSSPN 130 (303)
T ss_dssp -S-EEEEEECCHHHHHHHHHHH-T
T ss_pred CccEEEEecCCCcHHHHHHHhccC
Confidence 689999999999987766665543
No 127
>KOG2029|consensus
Probab=71.80 E-value=8.4 Score=36.06 Aligned_cols=39 Identities=23% Similarity=0.342 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHH
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIV 157 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~ 157 (166)
=+..++.+.|++-.+..+.-=+-+-+|-+||||+||.++
T Consensus 502 ~r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~ 540 (697)
T KOG2029|consen 502 HRRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLA 540 (697)
T ss_pred hhhHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHH
Confidence 467888899988888887766668899999999999865
No 128
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=70.73 E-value=5.3 Score=35.25 Aligned_cols=45 Identities=11% Similarity=0.089 Sum_probs=30.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcC
Q psy18225 114 IYGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 114 ~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
.|.+.|.++|.-.+.+.|.--. + ..+..|.|+||||..+.-+..+
T Consensus 264 ~f~~~l~~eLlP~I~~~y~~~~--d---~~~~~IaG~S~GGl~AL~~al~ 308 (411)
T PRK10439 264 DFWLAVQQELLPQVRAIAPFSD--D---ADRTVVAGQSFGGLAALYAGLH 308 (411)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC--C---ccceEEEEEChHHHHHHHHHHh
Confidence 4555677777777776653211 1 3578899999999999877544
No 129
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=69.79 E-value=7.2 Score=38.42 Aligned_cols=21 Identities=14% Similarity=0.305 Sum_probs=18.7
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
.|++.++|||+||.+++.+..
T Consensus 1132 ~~p~~l~G~S~Gg~vA~e~A~ 1152 (1296)
T PRK10252 1132 HGPYHLLGYSLGGTLAQGIAA 1152 (1296)
T ss_pred CCCEEEEEechhhHHHHHHHH
Confidence 589999999999999998753
No 130
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=69.54 E-value=16 Score=28.60 Aligned_cols=44 Identities=16% Similarity=0.156 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcCC
Q psy18225 120 QQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 120 ~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
++..++.+.++.+...+.. --..+|.+.|-|-|+.+++.++...
T Consensus 83 i~~s~~~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~ 126 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRY 126 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHc
Confidence 3444444444444443322 1156899999999999999988754
No 131
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=69.27 E-value=7.8 Score=29.93 Aligned_cols=21 Identities=29% Similarity=0.403 Sum_probs=17.9
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
..+|.|+|||.||.++.=++.
T Consensus 63 ~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 63 PDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp EEEEEEEEETHHHHHHHHHHH
T ss_pred ceeEEEEcccccccccchhhc
Confidence 689999999999999875544
No 132
>PRK10162 acetyl esterase; Provisional
Probab=69.10 E-value=5.3 Score=33.53 Aligned_cols=20 Identities=15% Similarity=0.295 Sum_probs=16.8
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
..+|.|+|||.||-++.-+.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a 172 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASA 172 (318)
T ss_pred hhHEEEEEECHHHHHHHHHH
Confidence 46999999999999987543
No 133
>PRK07868 acyl-CoA synthetase; Validated
Probab=69.09 E-value=3.8 Score=39.95 Aligned_cols=20 Identities=15% Similarity=0.391 Sum_probs=17.7
Q ss_pred ccEEEEecChhhHHHHHhhc
Q psy18225 143 AKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~ 162 (166)
.+|+++|||+||.+++....
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa 160 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAA 160 (994)
T ss_pred CceEEEEEChhHHHHHHHHH
Confidence 47999999999999987765
No 134
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=69.03 E-value=4.8 Score=33.60 Aligned_cols=25 Identities=24% Similarity=0.531 Sum_probs=20.3
Q ss_pred CCCCccEEEEecChhhHHHHHhhcCC
Q psy18225 139 PNHNAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 139 p~F~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
|+| .+|.|.|||-||-+++.+..+.
T Consensus 88 ~D~-s~l~l~GHSrGGk~Af~~al~~ 112 (259)
T PF12740_consen 88 PDF-SKLALAGHSRGGKVAFAMALGN 112 (259)
T ss_pred ccc-cceEEeeeCCCCHHHHHHHhhh
Confidence 454 4699999999999999887654
No 135
>COG1647 Esterase/lipase [General function prediction only]
Probab=67.44 E-value=4.9 Score=33.16 Aligned_cols=24 Identities=21% Similarity=0.448 Sum_probs=19.7
Q ss_pred ccEEEEecChhhHHHHHhhcCCCC
Q psy18225 143 AKISIIAHSLGCVIVYDVITGWIP 166 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~~~~ 166 (166)
-+|+++|=|||||++-=+-.+++|
T Consensus 85 ~eI~v~GlSmGGv~alkla~~~p~ 108 (243)
T COG1647 85 DEIAVVGLSMGGVFALKLAYHYPP 108 (243)
T ss_pred CeEEEEeecchhHHHHHHHhhCCc
Confidence 489999999999999866666554
No 136
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=65.54 E-value=4.3 Score=35.42 Aligned_cols=22 Identities=18% Similarity=0.376 Sum_probs=18.1
Q ss_pred CccEEEEecChhhHHHHHhhcC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~ 163 (166)
-.+|.++|||+||.=+..+|..
T Consensus 227 ~~~i~~~GHSFGGATa~~~l~~ 248 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATALQALRQ 248 (379)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH
T ss_pred hhheeeeecCchHHHHHHHHhh
Confidence 3569999999999988877653
No 137
>KOG4372|consensus
Probab=63.14 E-value=2.3 Score=37.68 Aligned_cols=17 Identities=35% Similarity=0.600 Sum_probs=14.4
Q ss_pred CCCCCCeEEEEEeCCCC
Q psy18225 18 RPEDISHLVFVVHGMGQ 34 (166)
Q Consensus 18 ~~~~i~hLvlVVHGIG~ 34 (166)
.+.+.+|||..+|||-+
T Consensus 75 ~~~k~~HLvVlthGi~~ 91 (405)
T KOG4372|consen 75 FPTKPKHLVVLTHGLHG 91 (405)
T ss_pred cccCCceEEEecccccc
Confidence 34688999999999876
No 138
>KOG1552|consensus
Probab=62.74 E-value=11 Score=31.39 Aligned_cols=43 Identities=19% Similarity=0.344 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcCCC
Q psy18225 122 GLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITGWI 165 (166)
Q Consensus 122 ~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~~~ 165 (166)
.+...+-.+|+-..++.- =.-+|-+.|+|+|++-+.|++++..
T Consensus 110 n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~ 152 (258)
T KOG1552|consen 110 NLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP 152 (258)
T ss_pred cchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC
Confidence 556666667765554431 1579999999999999999998753
No 139
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=62.61 E-value=10 Score=28.94 Aligned_cols=20 Identities=20% Similarity=0.343 Sum_probs=17.4
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
..+|.|+|||-|+-|+.-++
T Consensus 70 ~~~i~l~G~SAGg~la~~~~ 89 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLA 89 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHH
T ss_pred ccceEEeecccccchhhhhh
Confidence 46999999999999998665
No 140
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=61.56 E-value=5.2 Score=34.21 Aligned_cols=21 Identities=24% Similarity=0.309 Sum_probs=18.2
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
-+|-++|||+|+.++..++..
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~ 147 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGV 147 (336)
T ss_pred CceEEEeecccchhhHHHHhh
Confidence 699999999999999866654
No 141
>KOG4409|consensus
Probab=59.87 E-value=6 Score=34.59 Aligned_cols=17 Identities=24% Similarity=0.427 Sum_probs=15.2
Q ss_pred CccEEEEecChhhHHHH
Q psy18225 142 NAKISIIAHSLGCVIVY 158 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~ 158 (166)
-+|.-|+|||+||-|++
T Consensus 159 L~KmilvGHSfGGYLaa 175 (365)
T KOG4409|consen 159 LEKMILVGHSFGGYLAA 175 (365)
T ss_pred CcceeEeeccchHHHHH
Confidence 46999999999999886
No 142
>KOG2382|consensus
Probab=59.65 E-value=10 Score=32.54 Aligned_cols=13 Identities=23% Similarity=0.511 Sum_probs=12.4
Q ss_pred CccEEEEecChhh
Q psy18225 142 NAKISIIAHSLGC 154 (166)
Q Consensus 142 ~G~VsiigHSLGs 154 (166)
..++.++||||||
T Consensus 122 ~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 122 LDPVVLLGHSMGG 134 (315)
T ss_pred cCCceecccCcch
Confidence 7899999999999
No 143
>PRK04940 hypothetical protein; Provisional
Probab=59.49 E-value=16 Score=28.89 Aligned_cols=15 Identities=20% Similarity=0.067 Sum_probs=12.9
Q ss_pred cEEEEecChhhHHHH
Q psy18225 144 KISIIAHSLGCVIVY 158 (166)
Q Consensus 144 ~VsiigHSLGsvI~~ 158 (166)
++.|||+||||--+-
T Consensus 61 ~~~liGSSLGGyyA~ 75 (180)
T PRK04940 61 RPLICGVGLGGYWAE 75 (180)
T ss_pred CcEEEEeChHHHHHH
Confidence 699999999997654
No 144
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=58.86 E-value=33 Score=29.06 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcc-EEEEecChhhHHHHHhhcCCC
Q psy18225 118 EIQQGLTDELNRLYSMFVARNPNHNAK-ISIIAHSLGCVIVYDVITGWI 165 (166)
Q Consensus 118 ~I~~~v~~~lN~~y~~f~~~~p~F~G~-VsiigHSLGsvI~~DiL~~~~ 165 (166)
.-...+..+++.+++...+ +.|+ +.||||..|...+-+.|+...
T Consensus 171 ~~~~~~~ari~Aa~~~~~~----~~~~~ivlIg~G~gA~~~~~~la~~~ 215 (310)
T PF12048_consen 171 AYEERLFARIEAAIAFAQQ----QGGKNIVLIGHGTGAGWAARYLAEKP 215 (310)
T ss_pred HHHHHHHHHHHHHHHHHHh----cCCceEEEEEeChhHHHHHHHHhcCC
Confidence 3446777777877775544 3566 999999999999999998764
No 145
>KOG4627|consensus
Probab=58.28 E-value=19 Score=29.78 Aligned_cols=42 Identities=12% Similarity=0.131 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcCC
Q psy18225 118 EIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 118 ~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
+.+..+..-+|-+.+.|.. ...|-+=|||.|.-+++-++.+.
T Consensus 116 qt~~~~~~gv~filk~~~n-----~k~l~~gGHSaGAHLa~qav~R~ 157 (270)
T KOG4627|consen 116 QTMTQFTHGVNFILKYTEN-----TKVLTFGGHSAGAHLAAQAVMRQ 157 (270)
T ss_pred HHHHHHHHHHHHHHHhccc-----ceeEEEcccchHHHHHHHHHHHh
Confidence 4566666777777766642 34577779999999999988764
No 146
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=56.95 E-value=1.3e+02 Score=26.21 Aligned_cols=91 Identities=21% Similarity=0.180 Sum_probs=50.2
Q ss_pred CCCCCe-EEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCeEEEeeeccCCccccCCccccccchhhhhhH
Q psy18225 19 PEDISH-LVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLR 97 (166)
Q Consensus 19 ~~~i~h-LvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v~~~pI~W~~~l~~d~~~~~~it~~~i~~lR 97 (166)
+..-.- +|+++||+--...+. -.|..++++.++. -+.+-.+||.- .-++++
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~-------y~r~L~~~~~~rg-------~~~Vv~~~Rgc---------s~~~n~----- 121 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSP-------YARGLMRALSRRG-------WLVVVFHFRGC---------SGEANT----- 121 (345)
T ss_pred ccccCCceEEEEeccCCCCcCH-------HHHHHHHHHHhcC-------CeEEEEecccc---------cCCccc-----
Confidence 444444 899999975333321 2455555565443 34455677752 011110
Q ss_pred HHhhhhhhhhhcccCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHH
Q psy18225 98 HMLNASAMDIMYYTSPIYGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVI 156 (166)
Q Consensus 98 ~~~~~~~~Dvl~y~sp~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI 156 (166)
--.+|.+-.+. +| ..-++.+++.|. .+|+-.+|-|||+-+
T Consensus 122 --------~p~~yh~G~t~-D~----~~~l~~l~~~~~------~r~~~avG~SLGgnm 161 (345)
T COG0429 122 --------SPRLYHSGETE-DI----RFFLDWLKARFP------PRPLYAVGFSLGGNM 161 (345)
T ss_pred --------Ccceecccchh-HH----HHHHHHHHHhCC------CCceEEEEecccHHH
Confidence 11256665553 33 333455554442 799999999999943
No 147
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=54.98 E-value=27 Score=30.60 Aligned_cols=21 Identities=24% Similarity=0.362 Sum_probs=18.6
Q ss_pred ccEEEEecChhhHHHHHhhcC
Q psy18225 143 AKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 143 G~VsiigHSLGsvI~~DiL~~ 163 (166)
-+|-+.||||||.++-.+|.+
T Consensus 215 ~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 215 KNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred heEEEeeccccHHHHHHHHHh
Confidence 589999999999998888865
No 148
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=54.78 E-value=13 Score=30.18 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=26.3
Q ss_pred HHHhcCCCCCccEEEEecChhhHHHHHhhcCCCC
Q psy18225 133 MFVARNPNHNAKISIIAHSLGCVIVYDVITGWIP 166 (166)
Q Consensus 133 ~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~~~~ 166 (166)
++++.+|-.+|+|.++|.|-+|...+=+.+..+|
T Consensus 91 ~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p 124 (272)
T PF02129_consen 91 EWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPP 124 (272)
T ss_dssp HHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-T
T ss_pred HHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCC
Confidence 3555677779999999999999999866665544
No 149
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=54.32 E-value=36 Score=27.53 Aligned_cols=47 Identities=19% Similarity=0.291 Sum_probs=31.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcC
Q psy18225 112 SPIYGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 112 sp~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
++.|.+. ++.=++.+++....+.+ -.++|.++|+|.|++++.+.+..
T Consensus 22 ~~t~~~S-v~~G~~~L~~ai~~~~~----~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 22 SPTYDES-VAEGVANLDAAIRAAIA----AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CCccchH-HHHHHHHHHHHHHhhcc----CCCCEEEEEECHHHHHHHHHHHH
Confidence 3345533 33334556666655543 27899999999999999887753
No 150
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=53.32 E-value=21 Score=33.09 Aligned_cols=33 Identities=6% Similarity=0.221 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHH
Q psy18225 121 QGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYD 159 (166)
Q Consensus 121 ~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~D 159 (166)
+.+...+..+-+.-. ..+|+++|||+||.++-=
T Consensus 272 ~~i~~Ald~V~~~tG------~~~vnl~GyC~GGtl~a~ 304 (560)
T TIGR01839 272 DALKEAVDAVRAITG------SRDLNLLGACAGGLTCAA 304 (560)
T ss_pred HHHHHHHHHHHHhcC------CCCeeEEEECcchHHHHH
Confidence 455555555533221 678999999999998763
No 151
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=51.22 E-value=24 Score=30.01 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc-cEEEEecChhhHH
Q psy18225 121 QGLTDELNRLYSMFVARNPNHNA-KISIIAHSLGCVI 156 (166)
Q Consensus 121 ~~v~~~lN~~y~~f~~~~p~F~G-~VsiigHSLGsvI 156 (166)
+.+++++-+....|.+++|.+.+ ++.|.|-|-||.-
T Consensus 113 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~y 149 (415)
T PF00450_consen 113 DQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHY 149 (415)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHH
T ss_pred hHHHHHHHHHHHHhhhhhhhccCCCEEEEcccccccc
Confidence 57777778888888888999977 9999999999973
No 152
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=50.93 E-value=15 Score=29.87 Aligned_cols=69 Identities=16% Similarity=0.182 Sum_probs=43.0
Q ss_pred chhhhhhHHHhhhhhhhhhcccCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCcc-EEEEecChh--hHHHHHhh
Q psy18225 90 QLNVLNLRHMLNASAMDIMYYTSPIYGSEIQQGLTDELNRLYSMFVARNPNHNAK-ISIIAHSLG--CVIVYDVI 161 (166)
Q Consensus 90 ~~~i~~lR~~~~~~~~Dvl~y~sp~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~-VsiigHSLG--svI~~DiL 161 (166)
++.+..+|+.+... |.+...+|.|.-.|-..+.+.+.=+...... .+.|.|| |.++|-|-| ++-+-+.|
T Consensus 78 ~p~v~~l~~~v~~A--Dgvii~TPEYn~sipg~LKNaiDwls~~~~~-~~~~~~KpvaivgaSgg~~g~ra~~~L 149 (219)
T TIGR02690 78 HPKVRELRQLSEWS--EGQVWCSPERHGAITGSQKDQIDWIPLSVGP-VRPTQGKTLAVMQVSGGSQSFNAVNIL 149 (219)
T ss_pred CHHHHHHHHHHHhC--CEEEEeCCccccCcCHHHHHHHHhcccCccc-ccccCCCcEEEEEeCCcHhHHHHHHHH
Confidence 33566677766666 9999999999876666666666644332111 1237666 888988832 33355443
No 153
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=49.62 E-value=53 Score=27.42 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=31.8
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCC
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLR 66 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~ 66 (166)
|+||+. |-+.|++...+ -.|-|| .. +-+ .+ .|++.++.+++.-|....-.
T Consensus 39 L~~GcRcvElD~Wdg~~~e----P~V~HG-~t-lts-----~i-~f~~v~~~I~~~AF~~s~yP 90 (254)
T cd08633 39 LQAGCRCVEVDCWDGPDGE----PIVHHG-YT-LTS-----KI-LFKDVIETINKYAFIKNEYP 90 (254)
T ss_pred HHcCCcEEEEEeecCCCCC----cEEeeC-CC-ccc-----Cc-CHHHHHHHHHHHhccCCCCC
Confidence 678888 45778765321 268898 43 221 12 59999999988767544443
No 154
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=49.53 E-value=8.9 Score=31.00 Aligned_cols=14 Identities=50% Similarity=0.555 Sum_probs=12.3
Q ss_pred CccEEEEecChhhH
Q psy18225 142 NAKISIIAHSLGCV 155 (166)
Q Consensus 142 ~G~VsiigHSLGsv 155 (166)
.-.|-++|||||.+
T Consensus 234 i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 234 IDEIIIYGHSLGEV 247 (270)
T ss_pred CCEEEEEeCCCchh
Confidence 47999999999975
No 155
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=46.90 E-value=29 Score=32.11 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=24.6
Q ss_pred HHhcCCCC-CccEEEEecChhhHHHHHhhcCC
Q psy18225 134 FVARNPNH-NAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 134 f~~~~p~F-~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
+.+..|.- ..+|+|.|||-||.++.=++.+.
T Consensus 463 ~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~ 494 (620)
T COG1506 463 ALVKLPLVDPERIGITGGSYGGYMTLLAATKT 494 (620)
T ss_pred HHHhCCCcChHHeEEeccChHHHHHHHHHhcC
Confidence 55667764 58999999999999998776654
No 156
>COG0627 Predicted esterase [General function prediction only]
Probab=44.96 E-value=21 Score=30.51 Aligned_cols=16 Identities=25% Similarity=0.233 Sum_probs=12.8
Q ss_pred ccEEEEecChhhHHHH
Q psy18225 143 AKISIIAHSLGCVIVY 158 (166)
Q Consensus 143 G~VsiigHSLGsvI~~ 158 (166)
.+.+|+||||||-=++
T Consensus 152 ~~~aI~G~SMGG~GAl 167 (316)
T COG0627 152 DGRAIAGHSMGGYGAL 167 (316)
T ss_pred CCceeEEEeccchhhh
Confidence 3899999999985443
No 157
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=44.19 E-value=65 Score=26.95 Aligned_cols=51 Identities=16% Similarity=0.256 Sum_probs=31.8
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCe
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRA 67 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v 67 (166)
|+||+. |-+.|++...+ -.|-|| .. +-+ .+ .|++.++.+++.-|....-.|
T Consensus 39 L~~GcRcvElD~wdg~~~e----P~V~HG-~t-lts-----~i-~f~~v~~~I~~~AF~~S~yPv 91 (258)
T cd08629 39 LCKGCRCLELDCWDGPNQE----PIIYHG-YT-FTS-----KI-LFCDVLRAIRDYAFKASPYPV 91 (258)
T ss_pred HHhCCcEEEEEeecCCCCC----cEEeeC-CC-Ccc-----Cc-CHHHHHHHHHHHhccCCCCCE
Confidence 678888 44778764321 268898 42 221 11 589999999887776544433
No 158
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=43.78 E-value=74 Score=26.60 Aligned_cols=51 Identities=22% Similarity=0.311 Sum_probs=31.9
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCe
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRA 67 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v 67 (166)
|+||+. |-+.|++...+ -.|-|| +. +-+ .+ .|++.++.+++.-|....-.|
T Consensus 39 L~~GcRcvElD~wdg~~~e----P~V~HG-~t-lts-----~i-~f~~v~~~Ik~~AF~~s~yPv 91 (258)
T cd08631 39 LKRGCRCVEVDVWDGPNGE----PIVYHG-HT-FTS-----KI-LFKDVVAAVAQYAFQVSDYPV 91 (258)
T ss_pred HHcCCcEEEEEeecCCCCC----cEEeeC-Cc-ccC-----Cc-CHHHHHHHHHHHhccCCCCCE
Confidence 678887 44778764321 258898 53 211 11 599999999887776544433
No 159
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=43.33 E-value=20 Score=24.05 Aligned_cols=38 Identities=21% Similarity=0.422 Sum_probs=23.3
Q ss_pred CCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCeEEEeeecc
Q psy18225 22 ISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWR 75 (166)
Q Consensus 22 i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v~~~pI~W~ 75 (166)
+.-+|+++||+|... ..+....+.+.+ ..+.+.-+.++
T Consensus 15 ~k~~v~i~HG~~eh~---------~ry~~~a~~L~~-------~G~~V~~~D~r 52 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHS---------GRYAHLAEFLAE-------QGYAVFAYDHR 52 (79)
T ss_pred CCEEEEEeCCcHHHH---------HHHHHHHHHHHh-------CCCEEEEECCC
Confidence 889999999987432 235555555543 33555555544
No 160
>KOG4178|consensus
Probab=42.73 E-value=18 Score=31.20 Aligned_cols=21 Identities=14% Similarity=0.403 Sum_probs=18.2
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
.-++.++||..|++|++-+.-
T Consensus 112 ~~k~~lvgHDwGaivaw~la~ 132 (322)
T KOG4178|consen 112 LKKAFLVGHDWGAIVAWRLAL 132 (322)
T ss_pred cceeEEEeccchhHHHHHHHH
Confidence 568999999999999997653
No 161
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=42.60 E-value=67 Score=26.85 Aligned_cols=51 Identities=18% Similarity=0.327 Sum_probs=32.1
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCe
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRA 67 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v 67 (166)
|+||+. |-+.|++...+ -.|-|| +. +-+ .+ .|++.++.+++.-|....-.|
T Consensus 39 L~~GcRcvElD~wdg~~~e----P~V~HG-~t-lts-----~i-~f~~v~~~I~~~AF~~s~yPv 91 (258)
T cd08630 39 FAQGCRCVELDCWEGPGGE----PVIYHG-HT-LTS-----KI-LFRDVIQAVRQHAFTASPYPV 91 (258)
T ss_pred HHcCCcEEEEEeecCCCCC----cEEeeC-Cc-ccc-----ce-EHHHHHHHHHHHhccCCCCCE
Confidence 678888 44778765322 268898 42 221 22 599999999887676544443
No 162
>KOG3967|consensus
Probab=42.29 E-value=17 Score=30.13 Aligned_cols=40 Identities=18% Similarity=0.406 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcCCC
Q psy18225 124 TDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITGWI 165 (166)
Q Consensus 124 ~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~~~ 165 (166)
+..+-.++..+.. |.=--.|.+++||-||..+.|++-+|.
T Consensus 173 veh~~yvw~~~v~--pa~~~sv~vvahsyGG~~t~~l~~~f~ 212 (297)
T KOG3967|consen 173 VEHAKYVWKNIVL--PAKAESVFVVAHSYGGSLTLDLVERFP 212 (297)
T ss_pred HHHHHHHHHHHhc--ccCcceEEEEEeccCChhHHHHHHhcC
Confidence 3344445554442 222457999999999999999997763
No 163
>KOG0604|consensus
Probab=41.54 E-value=15 Score=31.95 Aligned_cols=16 Identities=50% Similarity=0.933 Sum_probs=14.4
Q ss_pred cChhhHHHHHhhcCCCC
Q psy18225 150 HSLGCVIVYDVITGWIP 166 (166)
Q Consensus 150 HSLGsvI~~DiL~~~~~ 166 (166)
-||| ||+|=+||+++|
T Consensus 247 wSlg-VimYIlLCGyPP 262 (400)
T KOG0604|consen 247 WSLG-VIMYILLCGYPP 262 (400)
T ss_pred cchh-HHHHHhhcCCCc
Confidence 4788 999999999988
No 164
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=41.50 E-value=35 Score=28.10 Aligned_cols=20 Identities=15% Similarity=0.308 Sum_probs=16.5
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
..+|.+.|||-||-++--+.
T Consensus 151 p~~i~v~GdSAGG~La~~~a 170 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALA 170 (312)
T ss_pred ccceEEEecCcccHHHHHHH
Confidence 45799999999999887543
No 165
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=40.49 E-value=54 Score=28.89 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhc
Q psy18225 126 ELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 126 ~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~ 162 (166)
|+=++|+...++. + +..|.++|+|.||-++-=+|.
T Consensus 180 qlv~~Y~~Lv~~~-G-~~nI~LmGDSAGGnL~Ls~Lq 214 (374)
T PF10340_consen 180 QLVATYDYLVESE-G-NKNIILMGDSAGGNLALSFLQ 214 (374)
T ss_pred HHHHHHHHHHhcc-C-CCeEEEEecCccHHHHHHHHH
Confidence 3345677666433 3 468999999999988765553
No 166
>KOG2551|consensus
Probab=40.31 E-value=27 Score=28.72 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=25.6
Q ss_pred EEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCC
Q psy18225 26 VFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSK 64 (166)
Q Consensus 26 vlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~ 64 (166)
|||+||-=|..+. +...+..+|+.+.++.+-+|++.+
T Consensus 8 vLcLHGfrQsg~~--F~~Ktg~~rK~l~k~~el~f~~aP 44 (230)
T KOG2551|consen 8 VLCLHGFRQSGKV--FSEKTGSLRKLLKKLAELVFPDAP 44 (230)
T ss_pred EEEecchhhccHH--HHHHhhhHHHHHHhhheEEecCCC
Confidence 7999997665433 555666788888777666666543
No 167
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=40.30 E-value=75 Score=27.74 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHh
Q psy18225 121 QGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDV 160 (166)
Q Consensus 121 ~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~Di 160 (166)
.+.+.+++.+-+ +++++ +| |++++.|-||||.++.=.
T Consensus 156 ~~~i~E~~~Ll~-Wl~~~-G~-~~~g~~G~SmGG~~A~la 192 (348)
T PF09752_consen 156 RATILESRALLH-WLERE-GY-GPLGLTGISMGGHMAALA 192 (348)
T ss_pred hHHHHHHHHHHH-HHHhc-CC-CceEEEEechhHhhHHhh
Confidence 445556655543 55555 64 599999999999998733
No 168
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=38.26 E-value=55 Score=26.43 Aligned_cols=24 Identities=8% Similarity=0.160 Sum_probs=20.9
Q ss_pred CccEEEEecChhhHHHHHhhcCCC
Q psy18225 142 NAKISIIAHSLGCVIVYDVITGWI 165 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~~~~ 165 (166)
..+|.+.|+|-|+-+++-+.+.++
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~p 119 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYP 119 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCC
Confidence 679999999999999998887653
No 169
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=37.91 E-value=50 Score=29.72 Aligned_cols=40 Identities=15% Similarity=0.307 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhhcC
Q psy18225 118 EIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVITG 163 (166)
Q Consensus 118 ~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL~~ 163 (166)
.|.+.+.+.+..+-+.-. .-+|.++|||.||.+++=+|..
T Consensus 162 Yi~e~l~~aid~v~~itg------~~~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 162 YILEGLSEAIDTVKDITG------QKDINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred HHHHHHHHHHHHHHHHhC------ccccceeeEecchHHHHHHHHh
Confidence 466666666666654432 5689999999999999877754
No 170
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=37.67 E-value=96 Score=25.89 Aligned_cols=51 Identities=14% Similarity=0.282 Sum_probs=31.3
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCe
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRA 67 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v 67 (166)
|+||+. |-+.|++...+ -.|-|| .. +- ..+ .|++.++.+++.-|....-.|
T Consensus 39 L~~GcRcvElD~wdg~~~e----P~v~HG-~t-~t-----~~i-~f~~v~~~I~~~aF~~s~yPv 91 (257)
T cd08593 39 LKKGCRCVELDCWDGPDGE----PIIYHG-HT-LT-----SKI-LFKDVIQAIREYAFKVSPYPV 91 (257)
T ss_pred HHhCCcEEEEEeecCCCCC----cEEeeC-Cc-cc-----cCc-CHHHHHHHHHHHhccCCCCCE
Confidence 678887 44668764321 268898 42 21 122 589999999887675444433
No 171
>PLN02633 palmitoyl protein thioesterase family protein
Probab=36.39 E-value=49 Score=28.50 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHhh
Q psy18225 120 QQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 120 ~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~DiL 161 (166)
++.|++++.. .|....-+.+||+|=||.++==++
T Consensus 79 ve~vce~l~~--------~~~l~~G~naIGfSQGGlflRa~i 112 (314)
T PLN02633 79 AEIACEKVKQ--------MKELSQGYNIVGRSQGNLVARGLI 112 (314)
T ss_pred HHHHHHHHhh--------chhhhCcEEEEEEccchHHHHHHH
Confidence 4555555544 333333499999999999875443
No 172
>KOG1551|consensus
Probab=35.97 E-value=38 Score=29.01 Aligned_cols=20 Identities=20% Similarity=0.305 Sum_probs=16.9
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
-|+..|+|-|||+.|+--.=
T Consensus 194 ~g~~~~~g~Smgg~~a~~vg 213 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVG 213 (371)
T ss_pred cccceeeeeecccHHHHhhc
Confidence 49999999999999986443
No 173
>KOG1515|consensus
Probab=35.55 E-value=65 Score=27.85 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=18.6
Q ss_pred HHhcCCCCCccEEEEecChhhHHHHHh
Q psy18225 134 FVARNPNHNAKISIIAHSLGCVIVYDV 160 (166)
Q Consensus 134 f~~~~p~F~G~VsiigHSLGsvI~~Di 160 (166)
+.+..-+|+ +|.|.|+|-||-|++=+
T Consensus 158 ~~~~~~D~~-rv~l~GDSaGGNia~~v 183 (336)
T KOG1515|consen 158 WLKLGADPS-RVFLAGDSAGGNIAHVV 183 (336)
T ss_pred HHHhCCCcc-cEEEEccCccHHHHHHH
Confidence 444444443 49999999999999843
No 174
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=34.66 E-value=1.2e+02 Score=24.87 Aligned_cols=51 Identities=20% Similarity=0.265 Sum_probs=31.5
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCe
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRA 67 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v 67 (166)
|.||++ |-+.|++...+ -.|-|| .. +-+ .+ .|++.++++++.-|....-.|
T Consensus 39 L~~GcRcvElD~wdg~~~e----PvV~HG-~t-lts-----~i-~f~dv~~aI~~~AF~~s~yPv 91 (227)
T cd08594 39 LQAGCRCVEVDCWDGPDGE----PVVHHG-YT-LTS-----KI-LFRDVIETINKYAFIKNEYPV 91 (227)
T ss_pred HHhCCcEEEEEeecCCCCC----cEEeeC-CC-ccc-----Cc-CHHHHHHHHHHhhccCCCCCE
Confidence 578887 44778764321 268888 42 221 12 599999999887676544444
No 175
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=32.92 E-value=82 Score=26.88 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC-CCccEEEEecChhhHHHHHhh
Q psy18225 119 IQQGLTDELNRLYSMFVARNPN-HNAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~-F~G~VsiigHSLGsvI~~DiL 161 (166)
..++|++-+-+-.+.++-.|-. =-.|+.++|||-||=.+|-+-
T Consensus 95 ~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlA 138 (307)
T PF07224_consen 95 SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALA 138 (307)
T ss_pred HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHH
Confidence 3345555555444445432211 258999999999999998654
No 176
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=32.41 E-value=33 Score=30.36 Aligned_cols=26 Identities=23% Similarity=0.379 Sum_probs=22.1
Q ss_pred HHHhcCCCC-CccEEEEecChhhHHHH
Q psy18225 133 MFVARNPNH-NAKISIIAHSLGCVIVY 158 (166)
Q Consensus 133 ~f~~~~p~F-~G~VsiigHSLGsvI~~ 158 (166)
+|+++-|.- ..+|.++|+|+|+-.++
T Consensus 215 DfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 215 DFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp HHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred HHHhcCcccCccceEEEeecccHHHHH
Confidence 688988874 89999999999998876
No 177
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=32.18 E-value=1.9e+02 Score=24.08 Aligned_cols=50 Identities=18% Similarity=0.237 Sum_probs=31.2
Q ss_pred eecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCC
Q psy18225 4 RLARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKL 65 (166)
Q Consensus 4 ~l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~ 65 (166)
.|+||+. |-+.|++...+ -.|-|| .. +- ..+ .||+.++++++.-|....-
T Consensus 38 aL~~GcRcvElD~Wdg~~~e----P~V~HG-~t-~t-----s~i-~f~dv~~~I~~~AF~~s~y 89 (254)
T cd08628 38 CLRMGCRCIELDCWDGPDGK----PIIYHG-WT-RT-----TKI-KFDDVVQAIKDHAFVTSEY 89 (254)
T ss_pred HHHcCCcEEEEEeecCCCCC----eEEeeC-CC-cc-----CCc-CHHHHHHHHHHHhccCCCC
Confidence 3678888 45778765321 268998 42 21 122 5899999888876654443
No 178
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=32.10 E-value=39 Score=28.79 Aligned_cols=28 Identities=18% Similarity=0.261 Sum_probs=23.4
Q ss_pred HHHhcCCCC-CccEEEEecChhhHHHHHh
Q psy18225 133 MFVARNPNH-NAKISIIAHSLGCVIVYDV 160 (166)
Q Consensus 133 ~f~~~~p~F-~G~VsiigHSLGsvI~~Di 160 (166)
+|+++.|.+ ..+|.+.|.|.||.++.-+
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG~lal~~ 192 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGGGLALAA 192 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHhCCCcCcceEEEEeecCchHHHHHH
Confidence 467788887 5899999999999998743
No 179
>KOG4530|consensus
Probab=31.59 E-value=44 Score=26.37 Aligned_cols=48 Identities=19% Similarity=0.302 Sum_probs=35.6
Q ss_pred cccccchhhhhhHHHhhhhhhhhhcccCchhhHHHHHHHHHHHHHHHHHH
Q psy18225 85 VESITQLNVLNLRHMLNASAMDIMYYTSPIYGSEIQQGLTDELNRLYSMF 134 (166)
Q Consensus 85 ~~~it~~~i~~lR~~~~~~~~Dvl~y~sp~y~~~I~~~v~~~lN~~y~~f 134 (166)
+|.-+++..++.|..++.. |.+.|-+|+|.=--=+.+.+.+..+|+++
T Consensus 69 vd~y~~~~t~aw~~ki~~a--D~ivFvtPqYN~gypA~LKNAlD~lyheW 116 (199)
T KOG4530|consen 69 VDEYYPPVTEAWRQKILEA--DSIVFVTPQYNFGYPAPLKNALDWLYHEW 116 (199)
T ss_pred ccccCcHHHHHHHHHHhhc--ceEEEecccccCCCchHHHHHHHHhhhhh
Confidence 3444555567777777655 99999999996545566778889999987
No 180
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=31.30 E-value=92 Score=24.91 Aligned_cols=31 Identities=23% Similarity=0.386 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCccEEEEecChhh
Q psy18225 122 GLTDELNRLYSMFVARNPNHNAKISIIAHSLGC 154 (166)
Q Consensus 122 ~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGs 154 (166)
.++..+.++.+.+.++=. .-+|.++|.|.|.
T Consensus 49 ~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGA 79 (192)
T PF06057_consen 49 QTAADLARIIRHYRARWG--RKRVVLIGYSFGA 79 (192)
T ss_pred HHHHHHHHHHHHHHHHhC--CceEEEEeecCCc
Confidence 344444444444443211 6799999999998
No 181
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=31.11 E-value=2.2e+02 Score=23.79 Aligned_cols=49 Identities=20% Similarity=0.312 Sum_probs=31.2
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCC
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKL 65 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~ 65 (166)
|+||+. |-+.|++...+ ..|-|| .. +-+ .+ .|++.++++++.-|....-
T Consensus 39 L~~GcRcvElD~Wdg~~~e----P~V~HG-~T-lts-----~i-~f~dv~~aI~~~AF~~S~y 89 (253)
T cd08632 39 LQAGCRCVEVDCWDGPDGE----PVVHHG-YT-LTS-----KI-TFRDVIETINKYAFVKNEF 89 (253)
T ss_pred HHcCCcEEEEEeecCCCCC----cEEeeC-CC-Ccc-----Cc-CHHHHHHHHHHHhccCCCC
Confidence 678888 45778764321 268898 43 321 12 5899999888876754443
No 182
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=31.04 E-value=37 Score=26.32 Aligned_cols=62 Identities=18% Similarity=0.172 Sum_probs=39.4
Q ss_pred ccchhhhhhHHHhhhhhhhhhcccCchhhHHHHHHHHHHHHHHHHHHHhcCCCC-CccEEEEecChhhHHH
Q psy18225 88 ITQLNVLNLRHMLNASAMDIMYYTSPIYGSEIQQGLTDELNRLYSMFVARNPNH-NAKISIIAHSLGCVIV 157 (166)
Q Consensus 88 it~~~i~~lR~~~~~~~~Dvl~y~sp~y~~~I~~~v~~~lN~~y~~f~~~~p~F-~G~VsiigHSLGsvI~ 157 (166)
-.++.+..+|.-+... |.+...+|.|.-.+=..+.+.+--+... .| ..+|.+++.|-|+.=+
T Consensus 53 ~~p~~v~~~~~~i~~a--D~li~~tPeYn~s~pg~lKnaiD~l~~~------~~~~Kpv~~~~~s~g~~~~ 115 (184)
T COG0431 53 GLPPAVQALREAIAAA--DGLIIATPEYNGSYPGALKNAIDWLSRE------ALGGKPVLLLGTSGGGAGG 115 (184)
T ss_pred cCCHHHHHHHHHHHhC--CEEEEECCccCCCCCHHHHHHHHhCCHh------HhCCCcEEEEecCCCchhH
Confidence 3455567777766655 9999999999865444444444333332 35 5566788887776543
No 183
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=30.83 E-value=2e+02 Score=24.06 Aligned_cols=52 Identities=21% Similarity=0.298 Sum_probs=32.1
Q ss_pred eecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCe
Q psy18225 4 RLARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRA 67 (166)
Q Consensus 4 ~l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v 67 (166)
-|+||+. |-+.|++...+ ..|-|| + .+-+ .+ .|++.++.+++.-|....-.|
T Consensus 38 aL~~GcRcvElD~wdg~~~e----p~v~HG-~-tlt~-----~i-~f~~v~~~I~~~AF~~s~yPv 91 (257)
T cd08595 38 ALRKGCRCLEIDCWDGADNE----PVVYHG-Y-TLTS-----KI-LFKEVITTVEKYAFEKSDYPV 91 (257)
T ss_pred HHHhCCcEEEEEeecCCCCC----cEEecC-C-Cccc-----cc-CHHHHHHHHHHHhccCCCCCE
Confidence 3678888 44778754321 268898 4 2221 12 599999999887676444433
No 184
>PF09713 A_thal_3526: Plant protein 1589 of unknown function (A_thal_3526); InterPro: IPR006476 This plant-specific family of proteins are defined by an uncharacterised region 57 residues in length. It is found toward the N terminus of most proteins that contain it. Examples include at least several proteins from Arabidopsis thaliana (Mouse-ear cress) and Oryza sativa (Rice). The function of the proteins are unknown.
Probab=30.79 E-value=47 Score=21.14 Aligned_cols=32 Identities=22% Similarity=0.411 Sum_probs=24.0
Q ss_pred hhcccCchhhHHHHHHHHHHHH-------HHHHHHHhcCCCC
Q psy18225 107 IMYYTSPIYGSEIQQGLTDELN-------RLYSMFVARNPNH 141 (166)
Q Consensus 107 vl~y~sp~y~~~I~~~v~~~lN-------~~y~~f~~~~p~F 141 (166)
+.+|+|. +++++.+.+++| .++++..+.||+|
T Consensus 9 l~~yMsk---~E~v~~L~~~a~I~P~~T~~VW~~Le~eN~eF 47 (54)
T PF09713_consen 9 LQLYMSK---EECVRALQKQANIEPVFTSTVWQKLEKENPEF 47 (54)
T ss_pred HHHcCCH---HHHHHHHHHHcCCChHHHHHHHHHHHHHCHHH
Confidence 4578884 578888888764 4678888888885
No 185
>PLN02223 phosphoinositide phospholipase C
Probab=29.86 E-value=1.3e+02 Score=27.82 Aligned_cols=46 Identities=20% Similarity=0.295 Sum_probs=29.6
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccC
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFAS 62 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~ 62 (166)
|+||+. |-+.|++...++ .|-|| +. +-+ .+ .|++.++++++.-|..
T Consensus 144 L~~GcRcvElD~W~~~~~~~----~v~hG-~t-lts-----~i-~f~~vl~aI~~~AF~~ 191 (537)
T PLN02223 144 LEQGVRVVELDLLPDGKDGI----CVRPK-WN-FEK-----PL-ELQECLDAIKEHAFTK 191 (537)
T ss_pred HHcCCcEEEEEecCCCCCCC----eEeeC-Cc-eec-----ce-EHHHHHHHHHHHhhhc
Confidence 678888 457786654443 57798 43 211 11 5888899888876654
No 186
>KOG3847|consensus
Probab=29.81 E-value=21 Score=31.17 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=16.3
Q ss_pred CccEEEEecChhhHHHHHhhc
Q psy18225 142 NAKISIIAHSLGCVIVYDVIT 162 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL~ 162 (166)
..+++++|||.||.-+-=+++
T Consensus 240 ~s~~aViGHSFGgAT~i~~ss 260 (399)
T KOG3847|consen 240 TSQAAVIGHSFGGATSIASSS 260 (399)
T ss_pred hhhhhheeccccchhhhhhhc
Confidence 457999999999987654443
No 187
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=29.43 E-value=79 Score=26.65 Aligned_cols=39 Identities=10% Similarity=0.336 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhcCCCC-CccEEEEecChhhH----HHHHhhc
Q psy18225 124 TDELNRLYSMFVARNPNH-NAKISIIAHSLGCV----IVYDVIT 162 (166)
Q Consensus 124 ~~~lN~~y~~f~~~~p~F-~G~VsiigHSLGsv----I~~DiL~ 162 (166)
+.++-+....|.+.+|.| +-+..|.|-|-||. ++..|+.
T Consensus 31 a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~ 74 (319)
T PLN02213 31 VKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQ 74 (319)
T ss_pred HHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHh
Confidence 366777788899999998 78999999999996 6666654
No 188
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=28.73 E-value=43 Score=27.11 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=19.6
Q ss_pred EEEEEeCCCCCCCc--hhHHhhhHHHHHHHHHHH
Q psy18225 25 LVFVVHGMGQKMDS--GRIIKNATQFRESVMWLK 56 (166)
Q Consensus 25 LvlVVHGIG~~~~~--~~~~~~~~~fr~~~~~l~ 56 (166)
++|++-|-|.+... ..+-.+...||+.++.+.
T Consensus 3 ~~~~f~Gqg~~~~~m~~~l~~~~p~~~~~~~~~~ 36 (290)
T TIGR00128 3 IAYVFPGQGSQTVGMGKDLYEQYPIAKELFDQAS 36 (290)
T ss_pred EEEEECCCCcchhhhHHHHHHcCHHHHHHHHHHH
Confidence 57888898876432 223334456777776554
No 189
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=27.69 E-value=29 Score=30.45 Aligned_cols=19 Identities=16% Similarity=0.510 Sum_probs=15.1
Q ss_pred CccEEEEecChhhHHHHHh
Q psy18225 142 NAKISIIAHSLGCVIVYDV 160 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~Di 160 (166)
..+|.++|||+||-=+..+
T Consensus 158 ~~~Vgv~GhS~GG~T~m~l 176 (365)
T COG4188 158 PQRVGVLGHSFGGYTAMEL 176 (365)
T ss_pred ccceEEEecccccHHHHHh
Confidence 5799999999998655443
No 190
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=26.74 E-value=2.5e+02 Score=23.49 Aligned_cols=53 Identities=19% Similarity=0.319 Sum_probs=32.0
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCe
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRA 67 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v 67 (166)
|+||++ |-+.|++... +.--.|-|| .. +-+ .+ .||+.++++++.-|....-.|
T Consensus 39 L~~GcRcvElD~wdg~~~--~~eP~V~HG-~t-lts-----~i-~f~dv~~aI~~~AF~~s~yPv 93 (257)
T cd08626 39 LLAGCRCIELDCWDGKGE--DQEPIITHG-KA-MCT-----DI-LFKDVIQAIKDTAFVTSDYPV 93 (257)
T ss_pred HHcCCcEEEEEecCCCCC--CCCCEEeeC-CC-Ccc-----Cc-CHHHHHHHHHHHhcccCCCCE
Confidence 678888 4577876421 111268898 43 211 11 599999999887776544433
No 191
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=26.42 E-value=80 Score=28.12 Aligned_cols=38 Identities=11% Similarity=0.345 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhcCCCC-CccEEEEecChhhH----HHHHhhc
Q psy18225 125 DELNRLYSMFVARNPNH-NAKISIIAHSLGCV----IVYDVIT 162 (166)
Q Consensus 125 ~~lN~~y~~f~~~~p~F-~G~VsiigHSLGsv----I~~DiL~ 162 (166)
+++-+....|.+++|.| +.++.|.|.|-||. ++..|+.
T Consensus 146 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 146 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 55666777888899997 78999999999996 6666654
No 192
>COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]
Probab=26.35 E-value=60 Score=27.17 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=26.9
Q ss_pred hhhhcccCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecC
Q psy18225 105 MDIMYYTSPIYGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHS 151 (166)
Q Consensus 105 ~Dvl~y~sp~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHS 151 (166)
=+||.|....-+.+|+......|+ .|-+-++|||
T Consensus 209 RNVLIYFd~~~q~~il~~f~~~L~-------------~gG~LflG~s 242 (268)
T COG1352 209 RNVLIYFDEETQERILRRFADSLK-------------PGGLLFLGHS 242 (268)
T ss_pred cceEEeeCHHHHHHHHHHHHHHhC-------------CCCEEEEccC
Confidence 378899988777777777666666 7889999998
No 193
>PF11467 LEDGF: Lens epithelium-derived growth factor (LEDGF) ; InterPro: IPR021567 LEDGF is a chromatin-associated protein that protects cells from stress-induced apoptosis. It is the binding partner of HIV-1 integrase in human cells. The integrase binding domain (IBD) of LEDGF is a compact right-handed bundle composed of five alpha-helices. The residues essential for the interaction with the integrase are present in the inter-helical loop regions of the bundle structure. ; PDB: 3F9K_K 3HPG_G 3U88_C 3HPH_H 2B4J_D 1Z9E_A.
Probab=26.30 E-value=71 Score=23.02 Aligned_cols=16 Identities=25% Similarity=0.488 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHh
Q psy18225 121 QGLTDELNRLYSMFVA 136 (166)
Q Consensus 121 ~~v~~~lN~~y~~f~~ 136 (166)
..|...++.+|+.|+.
T Consensus 62 ~~Ir~KA~~lYnkfK~ 77 (106)
T PF11467_consen 62 QQIRKKATELYNKFKS 77 (106)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5677888999998874
No 194
>KOG4840|consensus
Probab=26.22 E-value=41 Score=28.14 Aligned_cols=18 Identities=22% Similarity=0.523 Sum_probs=15.1
Q ss_pred CCCCCccEEEEecChhhH
Q psy18225 138 NPNHNAKISIIAHSLGCV 155 (166)
Q Consensus 138 ~p~F~G~VsiigHSLGsv 155 (166)
+.+|+-+|.++|||-|+-
T Consensus 102 ~~~fSt~vVL~GhSTGcQ 119 (299)
T KOG4840|consen 102 LCGFSTDVVLVGHSTGCQ 119 (299)
T ss_pred ccCcccceEEEecCccch
Confidence 346888999999999974
No 195
>PF01713 Smr: Smr domain; InterPro: IPR002625 This family includes the Smr (Small MutS Related) proteins, and the C-terminal region of the MutS2 protein. It has been suggested that this domain interacts with the MutS1 (P23909 from SWISSPROT) protein in the case of Smr proteins and with the N-terminal MutS related region of MutS2, P94545 from SWISSPROT [].; PDB: 3QD7_X 2D9I_A 3FAU_A 2VKC_A 2ZQE_A.
Probab=25.84 E-value=86 Score=20.68 Aligned_cols=14 Identities=14% Similarity=0.342 Sum_probs=8.1
Q ss_pred EEEEEeCCCCCCCc
Q psy18225 25 LVFVVHGMGQKMDS 38 (166)
Q Consensus 25 LvlVVHGIG~~~~~ 38 (166)
-+.||||.|.....
T Consensus 29 ~~~II~G~G~hS~~ 42 (83)
T PF01713_consen 29 ELRIITGKGNHSKG 42 (83)
T ss_dssp EEEEE--STCTCCT
T ss_pred EEEEEeccCCCCCC
Confidence 35699999965543
No 196
>KOG1283|consensus
Probab=25.47 E-value=1.1e+02 Score=26.92 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC-CccEEEEecChhhHHH
Q psy18225 119 IQQGLTDELNRLYSMFVARNPNH-NAKISIIAHSLGCVIV 157 (166)
Q Consensus 119 I~~~v~~~lN~~y~~f~~~~p~F-~G~VsiigHSLGsvI~ 157 (166)
=.+.++..+=.+.+.|-..||.| .-+..|+.-|-||=|+
T Consensus 97 ~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma 136 (414)
T KOG1283|consen 97 NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMA 136 (414)
T ss_pred cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchh
Confidence 35677888888899999999999 6899999999999765
No 197
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=25.40 E-value=54 Score=27.98 Aligned_cols=14 Identities=29% Similarity=0.185 Sum_probs=11.0
Q ss_pred CccEEEEecChhhH
Q psy18225 142 NAKISIIAHSLGCV 155 (166)
Q Consensus 142 ~G~VsiigHSLGsv 155 (166)
.-+..+.|||||=.
T Consensus 84 ~~p~~~aGHSlGEy 97 (310)
T COG0331 84 VKPDFVAGHSLGEY 97 (310)
T ss_pred CCCceeecccHhHH
Confidence 55679999999943
No 198
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=24.91 E-value=34 Score=28.91 Aligned_cols=12 Identities=33% Similarity=0.814 Sum_probs=11.3
Q ss_pred hhhHHHHHhhcC
Q psy18225 152 LGCVIVYDVITG 163 (166)
Q Consensus 152 LGsvI~~DiL~~ 163 (166)
||.+|++|++++
T Consensus 157 LG~ii~fDi~in 168 (275)
T PF09192_consen 157 LGRIIAFDIFIN 168 (275)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHhHHhhhhhhc
Confidence 899999999986
No 199
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=24.69 E-value=83 Score=26.30 Aligned_cols=53 Identities=19% Similarity=0.284 Sum_probs=31.5
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCe
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRA 67 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v 67 (166)
|.||+. |-+.|++...+-+ -.|-|| +. +-+ .+ .||+.++.+++.-|....-.|
T Consensus 39 L~~GcRcvElD~wdG~~~~~e--PiV~HG-~t-lts-----~i-~f~dv~~~I~~~AF~~S~yPv 93 (258)
T cd08623 39 LLSGCRCVELDCWKGRTAEEE--PVITHG-FT-MTT-----EI-SFKEVIEAIAECAFKTSPFPI 93 (258)
T ss_pred HHcCCCEEEEEeeCCCCCCCC--CEEeeC-CC-ccc-----Cc-CHHHHHHHHHHHhccCCCCCE
Confidence 678887 4477876421000 157899 42 211 12 589999988887776544444
No 200
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=24.19 E-value=70 Score=30.69 Aligned_cols=24 Identities=21% Similarity=0.135 Sum_probs=19.9
Q ss_pred CCccEEEEecChhhHHHHHhhcCC
Q psy18225 141 HNAKISIIAHSLGCVIVYDVITGW 164 (166)
Q Consensus 141 F~G~VsiigHSLGsvI~~DiL~~~ 164 (166)
.+|+|.++|.|.||.+++=+.+..
T Consensus 336 snGkVGm~G~SY~G~~~~~aAa~~ 359 (767)
T PRK05371 336 SNGKVAMTGKSYLGTLPNAVATTG 359 (767)
T ss_pred CCCeeEEEEEcHHHHHHHHHHhhC
Confidence 489999999999999998555443
No 201
>COG4663 FcbT1 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.44 E-value=61 Score=28.17 Aligned_cols=28 Identities=21% Similarity=0.417 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy18225 115 YGSEIQQGLTDELNRLYSMFVARNPNHN 142 (166)
Q Consensus 115 y~~~I~~~v~~~lN~~y~~f~~~~p~F~ 142 (166)
|.++|++...+..|++|.++-++||-|+
T Consensus 306 f~~eIl~a~~e~~~e~~ae~aa~np~fK 333 (363)
T COG4663 306 FSQEILKACREASDEVYAEKAAKNPLFK 333 (363)
T ss_pred CCHHHHHHHHHHHHHHHHHHhccChhHH
Confidence 5579999999999999999999999873
No 202
>PF10296 DUF2404: Putative integral membrane protein conserved region (DUF2404); InterPro: IPR019411 This is entry represents a domain of unknown function found in mitochondrial distribution and morphology proteins Mdm12 and Mdm34, and in maintenance of mitochondrial morphology protein Mmm1. These proteins are components of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum and mitochondria [].
Probab=23.16 E-value=82 Score=21.50 Aligned_cols=40 Identities=23% Similarity=0.408 Sum_probs=27.5
Q ss_pred ccCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhH
Q psy18225 110 YTSPIYGSEIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCV 155 (166)
Q Consensus 110 y~sp~y~~~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsv 155 (166)
|.++.+.+.|.+.+.+.+|.+ +.|+|=+++.+--=+||+-
T Consensus 12 ~~t~~~~~~i~~~L~~kL~~i------~~P~fl~~i~v~~~~lG~~ 51 (91)
T PF10296_consen 12 RRTEAFRDKIKEKLQKKLNKI------KLPSFLDEISVTELDLGDS 51 (91)
T ss_pred hcCHHHHHHHHHHHHHHHccc------cCCCccCcEEEEEEECCCC
Confidence 455555555666666665544 2699999999998888863
No 203
>PF14615 Rsa3: Ribosome-assembly protein 3
Probab=22.60 E-value=29 Score=21.38 Aligned_cols=33 Identities=18% Similarity=0.533 Sum_probs=22.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCC-CccEEEEecCh
Q psy18225 115 YGSEIQQGLTDELNRLYSMFVARNPNH-NAKISIIAHSL 152 (166)
Q Consensus 115 y~~~I~~~v~~~lN~~y~~f~~~~p~F-~G~VsiigHSL 152 (166)
|-+.+-++....+|++ +..|.| +-.+.++.++|
T Consensus 6 yl~~~t~efgdDLd~l-----R~~~dF~~~sl~~Li~aL 39 (47)
T PF14615_consen 6 YLQRLTDEFGDDLDEL-----RKAPDFTDKSLPLLIDAL 39 (47)
T ss_pred HHHHHHHHHHHHHHHH-----hcCCCCCchhHHHHHHHH
Confidence 4556677777777776 456888 45666666665
No 204
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=22.55 E-value=40 Score=28.53 Aligned_cols=14 Identities=29% Similarity=0.539 Sum_probs=11.2
Q ss_pred cEEEEecChhhHHH
Q psy18225 144 KISIIAHSLGCVIV 157 (166)
Q Consensus 144 ~VsiigHSLGsvI~ 157 (166)
++-.+|||+|++=.
T Consensus 137 k~n~VGhSmGg~~~ 150 (288)
T COG4814 137 KFNAVGHSMGGLGL 150 (288)
T ss_pred eeeeeeeccccHHH
Confidence 66789999998743
No 205
>PLN02209 serine carboxypeptidase
Probab=22.37 E-value=1.2e+02 Score=27.06 Aligned_cols=39 Identities=8% Similarity=0.311 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhcCCCCC-ccEEEEecChhhH----HHHHhhc
Q psy18225 124 TDELNRLYSMFVARNPNHN-AKISIIAHSLGCV----IVYDVIT 162 (166)
Q Consensus 124 ~~~lN~~y~~f~~~~p~F~-G~VsiigHSLGsv----I~~DiL~ 162 (166)
++++-+....|.+++|.|. -++.|.|.|-||. |+..|+.
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~ 190 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISK 190 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHh
Confidence 3555566778888999994 5999999999995 7777764
No 206
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=21.54 E-value=1.5e+02 Score=24.10 Aligned_cols=14 Identities=29% Similarity=0.515 Sum_probs=11.0
Q ss_pred cEEEEecChhhHHH
Q psy18225 144 KISIIAHSLGCVIV 157 (166)
Q Consensus 144 ~VsiigHSLGsvI~ 157 (166)
+-.++|||||=.-+
T Consensus 83 p~~~~GhSlGE~aA 96 (298)
T smart00827 83 PDAVVGHSLGEIAA 96 (298)
T ss_pred ccEEEecCHHHHHH
Confidence 34899999997655
No 207
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=21.52 E-value=63 Score=20.82 Aligned_cols=21 Identities=19% Similarity=0.537 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCC
Q psy18225 122 GLTDELNRLYSMFVARNPNHN 142 (166)
Q Consensus 122 ~v~~~lN~~y~~f~~~~p~F~ 142 (166)
++=..+.+..+.|++.||+++
T Consensus 5 eiPe~L~~~m~~fie~hP~WD 25 (57)
T PF10929_consen 5 EIPEDLHQAMKDFIETHPNWD 25 (57)
T ss_pred cccHHHHHHHHHHHHcCCCch
Confidence 444567777789999999873
No 208
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=21.44 E-value=3.2e+02 Score=22.43 Aligned_cols=51 Identities=16% Similarity=0.294 Sum_probs=31.2
Q ss_pred ecccCC--cccccCCCCCCCCeEEEEEeCCCCCCCchhHHhhhHHHHHHHHHHHHhcccCCCCCe
Q psy18225 5 LARGYK--DQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRA 67 (166)
Q Consensus 5 l~rg~~--~~~~~~~~~~~i~hLvlVVHGIG~~~~~~~~~~~~~~fr~~~~~l~~~~~~~~~~~v 67 (166)
|+||++ |-+.|++... -..|.|| . .+.+ .+ .|++.++.+++.-|..+.-.|
T Consensus 39 L~~GcR~vElD~wdg~dg----ePvV~Hg-~-tlts-----~i-~f~dv~~~I~~~AF~~S~yPv 91 (229)
T cd08627 39 LRMGCRCIELDCWDGPDG----MPVIYHG-H-TLTT-----KI-KFSDVLHTIKEHAFVTSEYPI 91 (229)
T ss_pred HHhCCCEEEEEeecCCCC----CEEEEeC-C-cCCC-----ce-EHHHHHHHHHHhhccCCCCCE
Confidence 567887 4466765432 1268998 3 3322 11 589999999887776544433
No 209
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=21.24 E-value=1.7e+02 Score=25.00 Aligned_cols=43 Identities=12% Similarity=0.167 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccEEEEecChhhHHHHHh
Q psy18225 118 EIQQGLTDELNRLYSMFVARNPNHNAKISIIAHSLGCVIVYDV 160 (166)
Q Consensus 118 ~I~~~v~~~lN~~y~~f~~~~p~F~G~VsiigHSLGsvI~~Di 160 (166)
...++-..-++.+|+...+--++=.-|+.+.|-|||+.=+-+.
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~a 126 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAA 126 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhh
Confidence 3455555666777777765545567899999999998754443
No 210
>KOG1516|consensus
Probab=21.04 E-value=71 Score=28.61 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=15.0
Q ss_pred CccEEEEecChhhHHHH
Q psy18225 142 NAKISIIAHSLGCVIVY 158 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~ 158 (166)
..+|-++|||-|+.++.
T Consensus 194 p~~vTl~G~saGa~~v~ 210 (545)
T KOG1516|consen 194 PKNVTLFGHSAGAASVS 210 (545)
T ss_pred CCeEEEEeechhHHHHH
Confidence 46999999999999875
No 211
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=20.62 E-value=72 Score=27.30 Aligned_cols=20 Identities=15% Similarity=0.091 Sum_probs=15.0
Q ss_pred CccEEEEecChhhHHHHHhh
Q psy18225 142 NAKISIIAHSLGCVIVYDVI 161 (166)
Q Consensus 142 ~G~VsiigHSLGsvI~~DiL 161 (166)
.+.=.+.|.||||.++.=+.
T Consensus 176 a~~r~L~G~SlGG~vsL~ag 195 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAG 195 (299)
T ss_pred CCCcEEeccccccHHHHHHH
Confidence 34467899999999986433
No 212
>PRK13562 acetolactate synthase 1 regulatory subunit; Provisional
Probab=20.61 E-value=1.1e+02 Score=21.20 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=19.9
Q ss_pred ecccCCccc--ccCCCCCCCCeEEEEEeC
Q psy18225 5 LARGYKDQA--LETDRPEDISHLVFVVHG 31 (166)
Q Consensus 5 l~rg~~~~~--~~~~~~~~i~hLvlVVHG 31 (166)
-+|||..+. .-+.+.+.++.+.+|++.
T Consensus 24 sRRg~NI~SLtvg~Te~~~iSRmtivv~~ 52 (84)
T PRK13562 24 VRLQYNIDTLHVTHSEQPGISNMEIQVDI 52 (84)
T ss_pred hccCcCeeeEEecccCCCCceEEEEEEeC
Confidence 379999763 234445789999999994
No 213
>PRK04946 hypothetical protein; Provisional
Probab=20.17 E-value=58 Score=25.70 Aligned_cols=10 Identities=40% Similarity=0.740 Sum_probs=8.3
Q ss_pred EEEEEeCCCC
Q psy18225 25 LVFVVHGMGQ 34 (166)
Q Consensus 25 LvlVVHGIG~ 34 (166)
-|+||||.|.
T Consensus 126 ~v~IIHGkG~ 135 (181)
T PRK04946 126 CACVMHGHGK 135 (181)
T ss_pred EEEEEcCCCH
Confidence 4799999994
Done!