BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18230
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80YA3|DDHD1_MOUSE Phospholipase DDHD1 OS=Mus musculus GN=Ddhd1 PE=2 SV=1
Length = 547
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 79/111 (71%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYF 60
+G RL RGY ++A D+P SH+VFVVHG+GQKMD GRIIKN RE+ +++K+F
Sbjct: 31 SGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKMEEKHF 90
Query: 61 ASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYT 111
++ EF PVEWRS L LDGD V+SIT V LR MLN+SAMDIMYYT
Sbjct: 91 SNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYT 141
>sp|O46606|DDHD1_BOVIN Phospholipase DDHD1 OS=Bos taurus GN=DDHD1 PE=1 SV=1
Length = 875
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 79/111 (71%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYF 60
+G RL RGY ++A D+P +H+VFVVHG+GQKMD GRIIKN RE+ +++++F
Sbjct: 387 SGTRLHRGYVEEATLEDKPSQTTHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEERHF 446
Query: 61 ASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYT 111
++ EF PVEWRS L LDGD V+SIT V LR MLN+SAMDIMYYT
Sbjct: 447 SNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYT 497
>sp|Q8NEL9|DDHD1_HUMAN Phospholipase DDHD1 OS=Homo sapiens GN=DDHD1 PE=1 SV=2
Length = 900
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 79/111 (71%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYF 60
+G RL RGY ++A D+P +H+VFVVHG+GQKMD GRIIKN RE+ +++++F
Sbjct: 384 SGTRLHRGYVEEATLEDKPSQTTHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEERHF 443
Query: 61 ASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYT 111
++ EF PVEWRS L LDGD V+SIT V LR MLN+SAMDIMYYT
Sbjct: 444 SNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYT 494
>sp|Q80Y98|DDHD2_MOUSE Phospholipase DDHD2 OS=Mus musculus GN=Ddhd2 PE=1 SV=3
Length = 699
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 14 LETDRPEDISHLVFVVHGMGQKMD--SGRIIKNATQFRESVMWLKKKYFASSKL-----R 66
+ P I HLVFVVHG+G D I++ FR + L + +F ++ R
Sbjct: 205 IHCGEPLQIDHLVFVVHGIGPACDLRFRSIVQCVNDFRSVSLNLLQTHFKKAQENEQIGR 264
Query: 67 AEFFPVEWRSSLALDG-DI-VESITQLNVLNLRHMLNASAMDIMYYT 111
EF PV W S L G DI ++ IT ++ LRH N + +D+ +Y
Sbjct: 265 VEFLPVNWHSPLHSTGVDIDLQRITLPSINRLRHFTNDTILDVFFYN 311
>sp|O94830|DDHD2_HUMAN Phospholipase DDHD2 OS=Homo sapiens GN=DDHD2 PE=1 SV=2
Length = 711
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 14 LETDRPEDISHLVFVVHGMGQKMD--SGRIIKNATQFRESVMWLKKKYFASSKL-----R 66
+ P I HLVFVVHG+G D I++ FR + L + +F ++ R
Sbjct: 205 IHCGEPLQIDHLVFVVHGIGPACDLRFRSIVQCVNDFRSVSLNLLQTHFKKAQENQQIGR 264
Query: 67 AEFFPVEWRSSLALDG-DI-VESITQLNVLNLRHMLNASAMDIMYYT 111
EF PV W S L G D+ ++ IT ++ LRH N + +D+ +Y
Sbjct: 265 VEFLPVNWHSPLHSTGVDVDLQRITLPSINRLRHFTNDTILDVFFYN 311
>sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1
Length = 1000
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 11 DQALETDRPEDISHLVFVVHGMGQKMD--SGRIIKNATQFRESVMWLKKKYFASS----- 63
D+ + + P+ + HLVFVVHG+G D II+ FR + L + +F S
Sbjct: 433 DEIPDGEMPQ-VDHLVFVVHGIGPVCDLRFRSIIECVDDFRVVSLKLLRTHFKKSLDDGK 491
Query: 64 KLRAEFFPVEWRSSLALDGDIVE----SITQLNVLNLRHMLNASAMDIMYY 110
R EF PV W SSL D V+ IT ++ RH N + +DI++Y
Sbjct: 492 VSRVEFLPVHWHSSLGGDATGVDRNIKKITLPSIGRFRHFTNETLLDILFY 542
>sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=1 SV=2
Length = 998
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 11 DQALETDRPEDISHLVFVVHGMGQKMD--SGRIIKNATQFRESVMWLKKKYFASS----- 63
D+ + + P+ + HLVF+VHG+G D II+ FR + L + +F S
Sbjct: 429 DEIPDGEMPQ-VDHLVFMVHGIGPVCDLRFRSIIECVDDFRVVSLKLLQTHFKKSVDEGK 487
Query: 64 KLRAEFFPVEWRSSL-----ALDGDIVESITQLNVLNLRHMLNASAMDIMYY 110
R EF PV W S+L +D +I + IT ++ RH N + +D+++Y
Sbjct: 488 VSRVEFLPVHWHSALGGHATGVDRNI-KKITLPSIGRFRHFTNETLLDVLFY 538
>sp|Q12204|YOR22_YEAST Probable phospholipase YOR022C, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YOR022C PE=1
SV=1
Length = 715
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 33/134 (24%)
Query: 8 GYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWL----KKKYFASS 63
G D+ + ++R D+ +L+ VHG+GQ + N F +V L KK Y S
Sbjct: 333 GASDRQIRSNR-RDVDNLILCVHGIGQTLGKKYEYVN---FAHTVNLLRSNMKKIYNNSE 388
Query: 64 KLRA-------------EFFPVEWRSSLALDGDIVES------------ITQLNVLNLRH 98
KL++ + P+ WR S++ D E +T VL LR
Sbjct: 389 KLQSLNTAPDYKSNCNVQVLPITWRHSISFQTDAKEENIENPDLPTLSQVTVNGVLPLRK 448
Query: 99 MLNASAMDIMYYTD 112
+L +DI+ Y +
Sbjct: 449 LLADGLLDILLYVE 462
>sp|P87109|YDK2_SCHPO Probable phospholipase C20G8.02, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC20G8.02 PE=3 SV=1
Length = 757
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 20/78 (25%)
Query: 18 RPE-DISHLVFVVHGMGQKM----DSGRIIKNATQFRESVMWLKKKYFASSKLRA----- 67
RP+ +++HL+ HG+GQKM ++ +K+ + FR++ LKK + +S L+A
Sbjct: 342 RPDREVNHLILCCHGIGQKMGERVETVSFVKDISNFRKT---LKKTFNSSPDLQAVYPKL 398
Query: 68 -------EFFPVEWRSSL 78
+ P+ WR +
Sbjct: 399 KGGGNGVQCLPLLWRQDI 416
>sp|Q7LKZ6|YJMD_SCHPO Probable phospholipase C1020.13c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1020.13c PE=3 SV=1
Length = 669
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 19 PEDISHLVFVVHGMGQK----------MDSGRIIKNATQFRESVMWLKKKYFASSKLRAE 68
P+ ++ L VVHG+GQK + + ++ Q ++++M K+ + +
Sbjct: 237 PKQVTDLFLVVHGIGQKRSETEERFLFTKTCNVFRSLIQIQKNIM--KEDPLIRNDYEPQ 294
Query: 69 FFPVEWRSSLALDGDI 84
P+ WR+ L + I
Sbjct: 295 LLPICWRNKLNFNSYI 310
>sp|O95789|ZMYM6_HUMAN Zinc finger MYM-type protein 6 OS=Homo sapiens GN=ZMYM6 PE=2 SV=2
Length = 1325
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 24 HLVFVVHGMGQKMDSGRIIKNATQFRESV-MWLKKKYFASSKLRAEFFPVEWRSSLALDG 82
H+ +H + + GR++K + R + ++L +K+ S L F EW LA
Sbjct: 1061 HVSLPLHAEVRWISRGRMLKRLFELRHEIEIFLSQKH---SDLAKYFHDEEWVGKLAYLS 1117
Query: 83 DIVESITQLNV 93
DI I +LN+
Sbjct: 1118 DIFSLINELNL 1128
>sp|P62278|RS13_RAT 40S ribosomal protein S13 OS=Rattus norvegicus GN=Rps13 PE=1 SV=2
Length = 151
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFR----ESVMWLK 56
TG ++ R K + L D PED+ HL+ + + ++ R K+A +FR ES +
Sbjct: 67 TGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDA-KFRLILIESRIHRL 125
Query: 57 KKYFASSKLRAEFFPVEWR 75
+Y+ + ++ P W+
Sbjct: 126 ARYYKTKRV----LPPNWK 140
>sp|P62301|RS13_MOUSE 40S ribosomal protein S13 OS=Mus musculus GN=Rps13 PE=1 SV=2
Length = 151
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFR----ESVMWLK 56
TG ++ R K + L D PED+ HL+ + + ++ R K+A +FR ES +
Sbjct: 67 TGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDA-KFRLILIESRIHRL 125
Query: 57 KKYFASSKLRAEFFPVEWR 75
+Y+ + ++ P W+
Sbjct: 126 ARYYKTKRV----LPPNWK 140
>sp|P62277|RS13_HUMAN 40S ribosomal protein S13 OS=Homo sapiens GN=RPS13 PE=1 SV=2
Length = 151
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFR----ESVMWLK 56
TG ++ R K + L D PED+ HL+ + + ++ R K+A +FR ES +
Sbjct: 67 TGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDA-KFRLILIESRIHRL 125
Query: 57 KKYFASSKLRAEFFPVEWR 75
+Y+ + ++ P W+
Sbjct: 126 ARYYKTKRV----LPPNWK 140
>sp|Q6ITC7|RS13_CHICK 40S ribosomal protein S13 OS=Gallus gallus GN=RPS13 PE=2 SV=3
Length = 151
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFR----ESVMWLK 56
TG ++ R K + L D PED+ HL+ + + ++ R K+A +FR ES +
Sbjct: 67 TGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDA-KFRLILIESRIHRL 125
Query: 57 KKYFASSKLRAEFFPVEWR 75
+Y+ + ++ P W+
Sbjct: 126 ARYYKTKRV----LPPNWK 140
>sp|Q56JX8|RS13_BOVIN 40S ribosomal protein S13 OS=Bos taurus GN=RPS13 PE=2 SV=3
Length = 151
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFR----ESVMWLK 56
TG ++ R K + L D PED+ HL+ + + ++ R K+A +FR ES +
Sbjct: 67 TGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDA-KFRLILIESRIHRL 125
Query: 57 KKYFASSKLRAEFFPVEWR 75
+Y+ + ++ P W+
Sbjct: 126 ARYYKTKRV----LPPNWK 140
>sp|Q9WVH0|RS13_CRIGR 40S ribosomal protein S13 OS=Cricetulus griseus GN=RPS13 PE=3 SV=3
Length = 151
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFR----ESVMWLK 56
TG ++ R K + L D PED+ HL+ + + ++ R K+A +FR ES +
Sbjct: 67 TGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDA-KFRLILIESRIHRL 125
Query: 57 KKYFASSKLRAEFFPVEWR 75
+Y+ + ++ P W+
Sbjct: 126 ARYYKTKRV----LPPNWK 140
>sp|P47772|RS13_ICTPU 40S ribosomal protein S13 OS=Ictalurus punctatus GN=rps13 PE=2 SV=3
Length = 151
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFR----ESVMWLK 56
TG ++ R K + L D PED+ HL+ + + ++ R K+A +FR ES +
Sbjct: 67 TGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDA-KFRLILVESRIHRL 125
Query: 57 KKYFASSKLRAEFFPVEWRSSLAL 80
+Y+ + ++ A + E ++ AL
Sbjct: 126 ARYYKTKRVLAPNWKYESSTASAL 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,297,956
Number of Sequences: 539616
Number of extensions: 1256472
Number of successful extensions: 2914
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2902
Number of HSP's gapped (non-prelim): 20
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)