Query psy18231
Match_columns 540
No_of_seqs 864 out of 3947
Neff 11.3
Searched_HMMs 29240
Date Fri Aug 16 17:04:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18231.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18231hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.4E-49 4.8E-54 387.1 35.1 283 159-533 103-410 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 5.6E-48 1.9E-52 360.4 37.9 286 159-535 8-303 (304)
3 3ow8_A WD repeat-containing pr 100.0 2E-48 6.7E-53 365.7 33.6 281 161-533 29-320 (321)
4 1nr0_A Actin interacting prote 100.0 2.8E-47 9.6E-52 390.3 42.1 381 128-533 153-610 (611)
5 1got_B GT-beta; complex (GTP-b 100.0 3.3E-47 1.1E-51 361.1 36.0 280 159-531 50-340 (340)
6 1nr0_A Actin interacting prote 100.0 1.4E-46 4.6E-51 385.2 42.2 341 147-535 129-568 (611)
7 2pbi_B Guanine nucleotide-bind 100.0 8.7E-47 3E-51 359.8 36.8 284 158-531 58-354 (354)
8 4gqb_B Methylosome protein 50; 100.0 1.5E-47 5.2E-52 362.1 29.8 292 150-537 17-334 (344)
9 4g56_B MGC81050 protein; prote 100.0 1.5E-47 5.3E-52 365.3 29.1 299 144-537 23-346 (357)
10 4ery_A WD repeat-containing pr 100.0 4.6E-46 1.6E-50 349.4 36.6 284 160-533 19-311 (312)
11 3iz6_a 40S ribosomal protein R 100.0 8.3E-47 2.8E-51 364.0 28.2 292 159-535 61-376 (380)
12 3frx_A Guanine nucleotide-bind 100.0 8.9E-46 3E-50 347.8 34.4 283 160-535 13-318 (319)
13 2xzm_R RACK1; ribosome, transl 100.0 1.2E-44 4.1E-49 344.1 37.9 287 159-536 16-342 (343)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.6E-45 1.6E-49 346.9 35.0 291 160-537 11-338 (345)
15 1erj_A Transcriptional repress 100.0 4.7E-45 1.6E-49 353.4 35.3 282 160-535 60-390 (393)
16 2ymu_A WD-40 repeat protein; u 100.0 5.6E-44 1.9E-48 365.0 38.4 368 138-531 193-577 (577)
17 2hes_X YDR267CP; beta-propelle 100.0 8.4E-44 2.9E-48 336.0 34.8 285 160-534 10-328 (330)
18 1vyh_C Platelet-activating fac 100.0 2.1E-43 7.2E-48 343.5 30.6 270 127-489 113-409 (410)
19 2ymu_A WD-40 repeat protein; u 100.0 1.2E-42 4.2E-47 355.0 37.1 351 158-534 10-375 (577)
20 1r5m_A SIR4-interacting protei 100.0 1.7E-42 5.7E-47 340.0 36.6 336 160-533 41-424 (425)
21 3ow8_A WD repeat-containing pr 100.0 5.6E-43 1.9E-47 328.6 30.4 263 137-489 48-319 (321)
22 2pm9_A Protein WEB1, protein t 100.0 5.9E-44 2E-48 349.4 24.5 308 144-535 42-415 (416)
23 3zwl_B Eukaryotic translation 100.0 7.4E-42 2.5E-46 328.8 38.3 295 159-536 27-348 (369)
24 4aow_A Guanine nucleotide-bind 100.0 3E-42 1E-46 327.7 35.0 286 160-536 34-339 (340)
25 1gxr_A ESG1, transducin-like e 100.0 4.8E-42 1.6E-46 325.8 34.4 279 160-533 47-336 (337)
26 4gqb_B Methylosome protein 50; 100.0 2E-42 6.8E-47 327.1 31.1 244 161-494 79-334 (344)
27 2oaj_A Protein SNI1; WD40 repe 100.0 2.4E-42 8E-47 366.2 34.8 399 126-532 62-659 (902)
28 1pgu_A Actin interacting prote 100.0 5.9E-42 2E-46 352.8 36.4 375 147-535 142-615 (615)
29 1got_B GT-beta; complex (GTP-b 100.0 6E-42 2.1E-46 324.9 33.4 267 128-488 61-340 (340)
30 3dm0_A Maltose-binding peripla 100.0 1.6E-41 5.6E-46 353.5 35.8 286 160-534 378-693 (694)
31 2ynn_A Coatomer subunit beta'; 100.0 1E-41 3.5E-46 318.0 30.5 249 197-535 4-260 (304)
32 3ei3_B DNA damage-binding prot 100.0 1.7E-41 5.7E-46 328.1 32.6 284 159-534 68-382 (383)
33 1sq9_A Antiviral protein SKI8; 100.0 1.7E-41 5.7E-46 329.9 32.1 296 160-535 12-396 (397)
34 4e54_B DNA damage-binding prot 100.0 6.6E-42 2.3E-46 336.2 27.7 287 160-536 115-432 (435)
35 3vl1_A 26S proteasome regulato 100.0 2.2E-41 7.6E-46 331.6 30.3 336 127-534 61-419 (420)
36 1k8k_C P40, ARP2/3 complex 41 100.0 4.1E-41 1.4E-45 324.1 31.4 287 161-535 5-362 (372)
37 2pbi_B Guanine nucleotide-bind 100.0 6E-41 2E-45 319.5 31.7 269 127-488 69-354 (354)
38 3i2n_A WD repeat-containing pr 100.0 4.7E-41 1.6E-45 321.7 31.1 287 161-535 15-354 (357)
39 3frx_A Guanine nucleotide-bind 100.0 9.7E-41 3.3E-45 313.5 32.5 264 137-492 30-318 (319)
40 4g56_B MGC81050 protein; prote 100.0 2.7E-41 9.2E-46 322.1 29.0 275 127-494 47-346 (357)
41 3sfz_A APAF-1, apoptotic pepti 100.0 5.7E-41 2E-45 372.7 35.3 395 127-536 620-1160(1249)
42 3k26_A Polycomb protein EED; W 100.0 2.4E-41 8.1E-46 324.9 27.6 282 162-534 16-366 (366)
43 2pm9_A Protein WEB1, protein t 100.0 2.6E-41 9E-46 330.6 28.1 292 162-537 10-340 (416)
44 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.1E-41 2.4E-45 318.1 30.1 280 128-498 22-342 (345)
45 3odt_A Protein DOA1; ubiquitin 100.0 3.4E-40 1.1E-44 309.7 33.5 275 160-536 14-298 (313)
46 1pgu_A Actin interacting prote 100.0 7.9E-40 2.7E-44 337.0 37.6 387 127-535 69-573 (615)
47 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.1E-39 3.8E-44 321.8 35.9 299 138-536 130-444 (445)
48 3v7d_B Cell division control p 100.0 1.8E-39 6.1E-44 322.3 35.6 303 159-536 116-423 (464)
49 2hes_X YDR267CP; beta-propelle 100.0 6.8E-40 2.3E-44 309.3 29.8 264 139-491 26-328 (330)
50 3dwl_C Actin-related protein 2 100.0 2.1E-41 7.1E-46 326.8 19.1 283 162-532 9-377 (377)
51 3vl1_A 26S proteasome regulato 100.0 6.8E-41 2.3E-45 328.2 23.0 278 165-535 57-366 (420)
52 2j04_B YDR362CP, TAU91; beta p 100.0 9.1E-41 3.1E-45 331.3 23.7 300 139-535 175-518 (524)
53 3iz6_a 40S ribosomal protein R 100.0 4.8E-40 1.6E-44 316.8 26.6 267 186-535 46-330 (380)
54 3dw8_B Serine/threonine-protei 100.0 2.5E-39 8.4E-44 319.8 32.0 291 161-533 25-445 (447)
55 2xzm_R RACK1; ribosome, transl 100.0 4.1E-39 1.4E-43 306.0 31.7 264 137-493 39-342 (343)
56 3mkq_A Coatomer beta'-subunit; 100.0 7.3E-39 2.5E-43 340.7 37.2 286 159-535 8-303 (814)
57 2oaj_A Protein SNI1; WD40 repe 100.0 1.5E-38 5E-43 337.2 38.7 364 160-535 13-606 (902)
58 3gre_A Serine/threonine-protei 100.0 7.3E-40 2.5E-44 322.5 26.7 279 161-531 60-437 (437)
59 4aez_A CDC20, WD repeat-contai 100.0 3.2E-39 1.1E-43 313.8 30.8 276 167-536 96-382 (401)
60 1gxr_A ESG1, transducin-like e 100.0 6.4E-39 2.2E-43 304.2 32.0 282 161-535 6-297 (337)
61 1yfq_A Cell cycle arrest prote 100.0 7.3E-39 2.5E-43 304.6 31.6 282 162-531 9-321 (342)
62 2pm7_B Protein transport prote 100.0 7E-39 2.4E-43 297.7 30.7 243 161-491 6-285 (297)
63 4ery_A WD repeat-containing pr 100.0 2E-38 6.8E-43 297.4 33.4 271 128-490 29-311 (312)
64 1erj_A Transcriptional repress 100.0 1.6E-38 5.6E-43 307.5 33.2 279 126-492 68-390 (393)
65 2pm7_B Protein transport prote 100.0 9.5E-39 3.2E-43 296.8 30.1 247 200-534 3-285 (297)
66 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-38 4E-43 354.2 36.5 358 160-535 611-1035(1249)
67 4h5i_A Guanine nucleotide-exch 100.0 2.4E-39 8.4E-44 309.4 26.7 279 165-538 15-347 (365)
68 1p22_A F-BOX/WD-repeat protein 100.0 8.3E-39 2.8E-43 314.4 31.0 274 162-536 131-416 (435)
69 4gga_A P55CDC, cell division c 100.0 2.1E-38 7.3E-43 309.8 33.6 274 166-535 107-396 (420)
70 4a11_B DNA excision repair pro 100.0 2.8E-38 9.7E-43 308.2 31.9 299 146-536 22-367 (408)
71 4ggc_A P55CDC, cell division c 100.0 5.1E-38 1.7E-42 295.5 32.0 273 167-535 28-316 (318)
72 3mmy_A MRNA export factor; mRN 100.0 3.4E-38 1.2E-42 303.1 30.4 279 160-532 35-344 (368)
73 3bg1_A Protein SEC13 homolog; 100.0 3.1E-38 1.1E-42 296.0 27.0 244 160-490 9-292 (316)
74 4gga_A P55CDC, cell division c 100.0 3E-37 1E-41 301.6 34.7 280 143-512 121-414 (420)
75 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.5E-37 8.6E-42 304.9 34.3 276 159-535 113-392 (445)
76 3v7d_B Cell division control p 100.0 3.1E-37 1E-41 306.2 33.2 296 138-532 133-461 (464)
77 3k26_A Polycomb protein EED; W 100.0 1.5E-37 5E-42 298.4 30.0 302 127-490 23-365 (366)
78 4aez_A CDC20, WD repeat-contai 100.0 3.3E-37 1.1E-41 299.5 32.0 268 140-499 106-388 (401)
79 3f3f_A Nucleoporin SEH1; struc 100.0 2.7E-37 9.2E-42 294.4 30.7 298 159-535 6-338 (351)
80 3dm0_A Maltose-binding peripla 100.0 2.1E-37 7.1E-42 322.5 31.9 271 131-490 389-692 (694)
81 3bg1_A Protein SEC13 homolog; 100.0 2.8E-38 9.6E-43 296.3 22.1 243 201-533 8-292 (316)
82 3mkq_A Coatomer beta'-subunit; 100.0 9.1E-37 3.1E-41 324.6 33.8 316 127-534 18-386 (814)
83 3jrp_A Fusion protein of prote 100.0 3.1E-36 1.1E-40 290.7 34.0 245 159-491 6-287 (379)
84 2aq5_A Coronin-1A; WD40 repeat 100.0 6.6E-37 2.2E-41 297.7 28.0 278 167-535 37-343 (402)
85 4aow_A Guanine nucleotide-bind 100.0 9.9E-36 3.4E-40 282.7 32.7 266 137-493 51-339 (340)
86 1sq9_A Antiviral protein SKI8; 100.0 1E-36 3.5E-41 296.1 26.3 265 138-493 27-397 (397)
87 2j04_B YDR362CP, TAU91; beta p 100.0 5.5E-37 1.9E-41 304.2 24.0 272 160-535 129-429 (524)
88 3i2n_A WD repeat-containing pr 100.0 1.2E-36 4E-41 291.1 25.6 268 136-494 30-356 (357)
89 4ggc_A P55CDC, cell division c 100.0 6.6E-35 2.3E-39 274.2 34.4 262 144-493 42-317 (318)
90 3ei3_B DNA damage-binding prot 100.0 9.5E-36 3.2E-40 287.7 29.3 263 137-491 86-382 (383)
91 3zwl_B Eukaryotic translation 100.0 1.2E-35 4.2E-40 285.3 29.4 276 128-496 38-351 (369)
92 4e54_B DNA damage-binding prot 100.0 4.8E-36 1.6E-40 294.5 26.1 279 127-495 124-434 (435)
93 4a11_B DNA excision repair pro 100.0 1.9E-35 6.6E-40 288.1 30.1 317 137-533 56-404 (408)
94 3jrp_A Fusion protein of prote 100.0 7.8E-36 2.7E-40 287.9 26.5 251 196-534 1-287 (379)
95 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.7E-35 3E-39 286.9 34.1 282 163-535 3-392 (450)
96 1r5m_A SIR4-interacting protei 100.0 1.1E-34 3.8E-39 284.3 33.0 312 127-490 50-424 (425)
97 3vu4_A KMHSV2; beta-propeller 100.0 9.6E-35 3.3E-39 276.8 31.4 276 161-536 16-338 (355)
98 3dwl_C Actin-related protein 2 100.0 3.3E-36 1.1E-40 290.4 20.9 241 202-533 7-280 (377)
99 3jro_A Fusion protein of prote 100.0 1.4E-35 4.8E-40 310.3 27.2 290 160-537 5-379 (753)
100 1k8k_C P40, ARP2/3 complex 41 100.0 5.9E-35 2E-39 281.0 28.2 243 202-534 4-274 (372)
101 3gre_A Serine/threonine-protei 100.0 4.3E-35 1.5E-39 288.4 27.5 270 127-488 68-437 (437)
102 1p22_A F-BOX/WD-repeat protein 100.0 5.4E-35 1.9E-39 287.2 27.7 274 137-513 143-433 (435)
103 2j04_A TAU60, YPL007P, hypothe 100.0 2E-35 6.8E-40 284.9 22.7 254 164-533 15-296 (588)
104 3odt_A Protein DOA1; ubiquitin 100.0 3.5E-34 1.2E-38 268.6 30.4 244 196-535 8-256 (313)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 3.2E-35 1.1E-39 285.8 23.6 270 133-494 43-345 (402)
106 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-35 8.5E-40 284.2 22.1 292 125-523 18-349 (588)
107 2xyi_A Probable histone-bindin 100.0 2.3E-34 7.8E-39 282.0 29.3 251 200-535 122-411 (430)
108 4h5i_A Guanine nucleotide-exch 100.0 3.3E-35 1.1E-39 280.8 20.9 255 146-492 42-344 (365)
109 4gq1_A NUP37; propeller, trans 100.0 2E-34 6.7E-39 278.6 25.8 280 151-533 76-388 (393)
110 3bws_A Protein LP49; two-domai 100.0 4.9E-33 1.7E-37 273.4 33.5 277 163-534 121-432 (433)
111 3dw8_B Serine/threonine-protei 100.0 7.7E-34 2.6E-38 280.4 25.2 276 205-535 27-374 (447)
112 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-33 4.6E-38 268.0 25.6 265 170-533 42-332 (343)
113 1yfq_A Cell cycle arrest prote 100.0 3.4E-33 1.2E-37 265.5 27.3 256 138-488 24-321 (342)
114 2xyi_A Probable histone-bindin 100.0 4.6E-33 1.6E-37 272.7 27.9 247 159-492 123-411 (430)
115 3jro_A Fusion protein of prote 100.0 8E-34 2.7E-38 297.0 22.2 249 199-535 2-286 (753)
116 2w18_A PALB2, fancn, partner a 100.0 3.3E-32 1.1E-36 246.4 28.8 269 167-533 42-356 (356)
117 1l0q_A Surface layer protein; 100.0 1.5E-31 5.1E-36 259.1 35.2 301 139-535 4-343 (391)
118 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-32 3.7E-37 262.6 26.0 248 190-535 3-272 (355)
119 1l0q_A Surface layer protein; 100.0 2.9E-31 1E-35 257.1 34.6 262 177-535 3-276 (391)
120 3mmy_A MRNA export factor; mRN 100.0 3.6E-32 1.2E-36 261.0 26.0 268 137-494 54-349 (368)
121 3f3f_A Nucleoporin SEH1; struc 100.0 3.5E-32 1.2E-36 259.0 24.7 282 127-499 16-345 (351)
122 2w18_A PALB2, fancn, partner a 100.0 2.8E-31 9.6E-36 240.3 24.6 209 163-489 110-355 (356)
123 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.1E-30 7.3E-35 255.5 30.8 241 162-492 100-392 (450)
124 3lrv_A PRE-mRNA-splicing facto 100.0 7.3E-31 2.5E-35 249.2 25.6 256 137-489 48-331 (343)
125 1nir_A Nitrite reductase; hemo 100.0 7.8E-29 2.7E-33 247.9 35.6 308 138-535 150-515 (543)
126 3bws_A Protein LP49; two-domai 100.0 2.5E-29 8.6E-34 247.0 29.9 269 127-491 127-432 (433)
127 4gq1_A NUP37; propeller, trans 100.0 8.8E-30 3E-34 246.0 18.5 243 137-490 101-388 (393)
128 1nir_A Nitrite reductase; hemo 100.0 5.7E-28 1.9E-32 241.6 28.1 281 171-536 144-460 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 6.7E-28 2.3E-32 234.1 26.5 272 148-517 94-410 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.6E-28 9E-33 237.0 22.2 275 163-535 61-388 (415)
131 2ecf_A Dipeptidyl peptidase IV 100.0 9.8E-27 3.3E-31 244.5 26.3 291 164-534 36-413 (741)
132 2ecf_A Dipeptidyl peptidase IV 99.9 3.1E-26 1E-30 240.8 26.2 307 166-534 110-459 (741)
133 3u4y_A Uncharacterized protein 99.9 4.1E-25 1.4E-29 208.6 30.2 273 170-535 3-305 (331)
134 1k32_A Tricorn protease; prote 99.9 1.9E-25 6.6E-30 242.5 31.7 343 147-535 33-462 (1045)
135 3vgz_A Uncharacterized protein 99.9 1.2E-24 4.1E-29 207.4 32.4 267 161-523 37-332 (353)
136 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-25 5.9E-30 233.7 28.4 308 165-535 82-436 (706)
137 1ri6_A Putative isomerase YBHE 99.9 1.4E-24 4.9E-29 205.9 28.8 266 177-533 5-307 (343)
138 1xfd_A DIP, dipeptidyl aminope 99.9 4.1E-26 1.4E-30 239.2 18.8 293 166-534 18-393 (723)
139 1k32_A Tricorn protease; prote 99.9 1.4E-24 4.7E-29 235.8 30.7 360 126-533 56-501 (1045)
140 2ojh_A Uncharacterized protein 99.9 6.9E-25 2.4E-29 203.3 24.0 250 181-523 17-290 (297)
141 1ri6_A Putative isomerase YBHE 99.9 3.3E-24 1.1E-28 203.4 27.8 284 143-517 11-335 (343)
142 1pby_B Quinohemoprotein amine 99.9 8.1E-25 2.8E-29 207.0 23.3 261 177-535 2-311 (337)
143 1xfd_A DIP, dipeptidyl aminope 99.9 1E-24 3.5E-29 228.6 26.3 342 126-523 20-428 (723)
144 1jmx_B Amine dehydrogenase; ox 99.9 3.7E-23 1.3E-27 196.6 28.6 263 169-535 4-326 (349)
145 3u4y_A Uncharacterized protein 99.9 4E-23 1.4E-27 194.9 27.8 271 137-493 10-306 (331)
146 2ojh_A Uncharacterized protein 99.9 1.1E-23 3.9E-28 195.1 22.8 248 143-482 18-293 (297)
147 3hfq_A Uncharacterized protein 99.9 3E-22 1E-26 190.3 29.7 269 185-533 15-316 (347)
148 3o4h_A Acylamino-acid-releasin 99.9 2.1E-23 7.3E-28 212.5 22.7 263 164-533 21-314 (582)
149 1pby_B Quinohemoprotein amine 99.9 1.1E-22 3.9E-27 192.2 24.9 284 140-500 4-319 (337)
150 2z3z_A Dipeptidyl aminopeptida 99.9 5.2E-23 1.8E-27 214.9 22.4 282 167-534 28-391 (706)
151 3hfq_A Uncharacterized protein 99.9 1.1E-21 3.9E-26 186.2 28.5 246 161-495 36-323 (347)
152 3vgz_A Uncharacterized protein 99.9 7.4E-22 2.5E-26 188.0 26.5 250 146-482 68-335 (353)
153 1z68_A Fibroblast activation p 99.9 1.7E-22 5.8E-27 211.4 21.3 287 169-534 20-391 (719)
154 1z68_A Fibroblast activation p 99.9 2.5E-22 8.6E-27 210.1 22.2 352 127-535 20-444 (719)
155 3scy_A Hypothetical bacterial 99.9 1.6E-20 5.3E-25 179.4 32.1 279 174-533 11-336 (361)
156 3pe7_A Oligogalacturonate lyas 99.9 5.4E-22 1.8E-26 191.6 21.4 270 170-533 41-381 (388)
157 3o4h_A Acylamino-acid-releasin 99.9 3.5E-22 1.2E-26 203.5 20.4 231 206-532 21-274 (582)
158 3scy_A Hypothetical bacterial 99.9 6.4E-20 2.2E-24 175.1 32.0 285 144-513 24-360 (361)
159 2oit_A Nucleoporin 214KDA; NH2 99.9 4.1E-21 1.4E-25 186.9 21.0 206 148-448 24-279 (434)
160 2oit_A Nucleoporin 214KDA; NH2 99.9 4.1E-21 1.4E-25 186.9 20.6 262 186-533 23-332 (434)
161 1jmx_B Amine dehydrogenase; ox 99.9 3.6E-20 1.2E-24 176.0 24.5 283 138-500 12-334 (349)
162 1jof_A Carboxy-CIS,CIS-muconat 99.9 1E-19 3.6E-24 173.7 26.4 272 178-535 4-342 (365)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 9.6E-20 3.3E-24 173.9 24.2 241 165-492 40-342 (365)
164 2oiz_A Aromatic amine dehydrog 99.8 3.3E-19 1.1E-23 169.2 26.3 280 145-517 29-360 (361)
165 4a5s_A Dipeptidyl peptidase 4 99.8 1.1E-19 3.8E-24 190.1 24.5 316 166-523 18-381 (740)
166 3c5m_A Oligogalacturonate lyas 99.8 1.9E-20 6.6E-25 181.2 17.4 297 163-533 34-381 (396)
167 2oiz_A Aromatic amine dehydrog 99.8 6.5E-19 2.2E-23 167.2 25.7 264 174-535 13-335 (361)
168 3azo_A Aminopeptidase; POP fam 99.8 1.3E-18 4.5E-23 180.1 25.0 278 161-532 20-365 (662)
169 1q7f_A NHL, brain tumor CG1071 99.8 3.2E-17 1.1E-21 150.8 30.9 246 162-538 27-284 (286)
170 2dg1_A DRP35, lactonase; beta 99.8 7.8E-18 2.7E-22 158.7 26.6 266 165-523 6-298 (333)
171 3fvz_A Peptidyl-glycine alpha- 99.8 2E-17 6.8E-22 155.3 29.3 253 164-535 23-323 (329)
172 3pe7_A Oligogalacturonate lyas 99.8 1.2E-18 4.1E-23 168.1 21.1 283 189-535 13-330 (388)
173 2gop_A Trilobed protease; beta 99.8 2.3E-17 8E-22 156.4 25.0 282 165-533 15-330 (347)
174 4a5s_A Dipeptidyl peptidase 4 99.8 1.9E-18 6.6E-23 180.7 18.2 236 206-535 16-354 (740)
175 3c5m_A Oligogalacturonate lyas 99.8 4.4E-17 1.5E-21 157.5 20.9 251 147-490 60-381 (396)
176 2dg1_A DRP35, lactonase; beta 99.8 1.3E-15 4.5E-20 143.4 30.3 250 141-482 21-301 (333)
177 1qks_A Cytochrome CD1 nitrite 99.8 5.1E-15 1.7E-19 147.5 35.4 308 138-535 168-539 (567)
178 2xdw_A Prolyl endopeptidase; a 99.7 5.2E-16 1.8E-20 161.6 29.0 273 174-536 81-416 (710)
179 3e5z_A Putative gluconolactona 99.7 1.9E-15 6.4E-20 139.7 28.6 244 196-534 17-286 (296)
180 3dsm_A Uncharacterized protein 99.7 4.1E-16 1.4E-20 146.1 23.7 261 184-533 15-301 (328)
181 3azo_A Aminopeptidase; POP fam 99.7 9.1E-17 3.1E-21 166.3 20.2 270 169-531 81-408 (662)
182 1vhn_A Putative flavin oxidore 99.7 2.5E-18 8.4E-23 158.1 7.4 110 13-123 2-111 (318)
183 1qks_A Cytochrome CD1 nitrite 99.7 5.1E-15 1.7E-19 147.5 31.8 279 174-535 165-478 (567)
184 2bkl_A Prolyl endopeptidase; m 99.7 3.9E-16 1.4E-20 162.0 24.6 271 173-535 76-398 (695)
185 2z2n_A Virginiamycin B lyase; 99.7 3.7E-14 1.3E-18 131.1 35.5 275 164-535 14-296 (299)
186 2xdw_A Prolyl endopeptidase; a 99.7 1.6E-15 5.6E-20 157.8 27.9 240 163-493 123-416 (710)
187 3b0p_A TRNA-dihydrouridine syn 99.7 2.6E-18 8.9E-23 159.3 5.3 109 13-123 1-111 (350)
188 2mad_H Methylamine dehydrogena 99.7 2.7E-14 9.1E-19 135.5 33.0 267 171-535 27-351 (373)
189 2bkl_A Prolyl endopeptidase; m 99.7 1.7E-16 5.8E-21 164.7 19.0 237 163-494 119-400 (695)
190 3no2_A Uncharacterized protein 99.7 2E-15 6.8E-20 137.0 23.7 250 175-511 4-272 (276)
191 2gop_A Trilobed protease; beta 99.7 2.4E-15 8.1E-20 142.5 24.8 245 146-499 42-337 (347)
192 3e5z_A Putative gluconolactona 99.7 6.5E-15 2.2E-19 136.1 25.8 235 163-494 26-289 (296)
193 3dsm_A Uncharacterized protein 99.7 2.6E-14 9E-19 133.7 29.6 267 145-512 15-319 (328)
194 3sjl_D Methylamine dehydrogena 99.7 1.3E-14 4.6E-19 135.3 26.9 268 170-535 38-364 (386)
195 1rwi_B Serine/threonine-protei 99.7 1E-14 3.5E-19 132.7 23.7 238 166-494 25-267 (270)
196 1rwi_B Serine/threonine-protei 99.7 1.8E-14 6.3E-19 131.1 23.2 237 208-537 25-267 (270)
197 3no2_A Uncharacterized protein 99.6 5.3E-14 1.8E-18 127.7 23.9 211 217-523 4-231 (276)
198 3sjl_D Methylamine dehydrogena 99.6 6.8E-14 2.3E-18 130.6 24.9 277 146-515 58-384 (386)
199 1yr2_A Prolyl oligopeptidase; 99.6 2E-14 6.8E-19 150.3 22.5 272 173-535 115-442 (741)
200 3c75_H MADH, methylamine dehyd 99.6 1.3E-13 4.6E-18 131.1 26.1 265 174-535 82-403 (426)
201 1q7f_A NHL, brain tumor CG1071 99.6 2.8E-13 9.7E-18 124.3 27.4 215 144-449 48-282 (286)
202 2qc5_A Streptogramin B lactona 99.6 2.7E-12 9.4E-17 118.5 34.1 273 164-533 19-299 (300)
203 3fvz_A Peptidyl-glycine alpha- 99.6 1.2E-13 4.2E-18 129.4 24.3 215 146-447 68-322 (329)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 9.4E-13 3.2E-17 122.6 28.2 240 205-535 16-300 (314)
205 2mad_H Methylamine dehydrogena 99.6 3.8E-12 1.3E-16 120.7 31.8 259 148-498 48-357 (373)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.2E-12 4E-17 122.0 28.0 234 164-491 17-299 (314)
207 1yr2_A Prolyl oligopeptidase; 99.6 1.5E-13 5E-18 143.7 22.8 240 163-493 161-443 (741)
208 2z2n_A Virginiamycin B lyase; 99.5 1.3E-11 4.6E-16 113.8 30.6 236 203-533 11-254 (299)
209 3hrp_A Uncharacterized protein 99.5 1E-11 3.5E-16 119.5 28.4 234 207-533 131-409 (409)
210 3hrp_A Uncharacterized protein 99.5 6E-12 2E-16 121.1 26.0 235 164-489 130-408 (409)
211 2qe8_A Uncharacterized protein 99.5 1.1E-12 3.7E-17 123.7 20.3 258 165-527 17-314 (343)
212 3c75_H MADH, methylamine dehyd 99.5 6.7E-12 2.3E-16 119.4 23.8 260 147-498 99-409 (426)
213 1kb0_A Quinohemoprotein alcoho 99.5 4.3E-12 1.5E-16 130.0 24.1 264 175-521 127-536 (677)
214 1xip_A Nucleoporin NUP159; bet 99.5 9.3E-13 3.2E-17 123.5 17.2 168 166-433 39-230 (388)
215 3q7m_A Lipoprotein YFGL, BAMB; 99.5 2.5E-11 8.6E-16 116.1 27.6 266 175-531 102-375 (376)
216 3g4e_A Regucalcin; six bladed 99.5 3.9E-11 1.3E-15 110.5 26.6 226 205-523 11-260 (297)
217 1xip_A Nucleoporin NUP159; bet 99.5 7E-13 2.4E-17 124.3 14.5 171 208-478 39-231 (388)
218 1yiq_A Quinohemoprotein alcoho 99.4 8.9E-12 3.1E-16 128.0 23.0 264 175-521 120-534 (689)
219 3iuj_A Prolyl endopeptidase; h 99.4 5.4E-12 1.9E-16 130.6 21.5 238 163-494 127-408 (693)
220 1mda_H Methylamine dehydrogena 99.4 1E-11 3.4E-16 116.3 20.9 244 187-535 47-347 (368)
221 3dr2_A Exported gluconolactona 99.4 6.4E-11 2.2E-15 109.5 25.5 238 198-531 36-303 (305)
222 2qc5_A Streptogramin B lactona 99.4 7.9E-10 2.7E-14 101.8 31.1 229 165-489 62-298 (300)
223 3g4e_A Regucalcin; six bladed 99.4 1.1E-10 3.6E-15 107.6 24.1 220 167-480 15-261 (297)
224 3iuj_A Prolyl endopeptidase; h 99.4 1.6E-11 5.5E-16 127.1 19.3 239 204-535 126-406 (693)
225 1kb0_A Quinohemoprotein alcoho 99.4 5.9E-11 2E-15 121.6 23.0 296 176-536 77-509 (677)
226 2ghs_A AGR_C_1268P; regucalcin 99.4 2.2E-10 7.4E-15 107.0 25.0 220 209-523 51-290 (326)
227 2hz6_A Endoplasmic reticulum t 99.4 8.3E-13 2.8E-17 125.4 8.3 206 217-518 8-217 (369)
228 3dr2_A Exported gluconolactona 99.4 1.5E-10 5.1E-15 107.1 22.9 221 163-482 43-298 (305)
229 1yiq_A Quinohemoprotein alcoho 99.4 6.8E-11 2.3E-15 121.5 22.4 296 176-536 70-507 (689)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.3 2.4E-10 8.1E-15 109.3 23.7 266 175-535 52-338 (376)
231 1mda_H Methylamine dehydrogena 99.3 4.3E-11 1.5E-15 112.1 17.8 265 148-514 47-366 (368)
232 2ghs_A AGR_C_1268P; regucalcin 99.3 6.6E-10 2.2E-14 103.7 25.3 218 167-480 51-291 (326)
233 1fwx_A Nitrous oxide reductase 99.3 8.2E-11 2.8E-15 114.4 18.7 267 174-535 99-432 (595)
234 2hz6_A Endoplasmic reticulum t 99.3 5.6E-13 1.9E-17 126.6 2.9 257 175-533 8-278 (369)
235 3hxj_A Pyrrolo-quinoline quino 99.3 1.5E-10 5.2E-15 108.4 17.2 263 166-536 61-326 (330)
236 2qe8_A Uncharacterized protein 99.1 8.5E-10 2.9E-14 103.8 16.2 227 207-532 17-276 (343)
237 3hxj_A Pyrrolo-quinoline quino 99.1 3.6E-10 1.2E-14 105.8 13.5 255 170-532 25-282 (330)
238 1kv9_A Type II quinohemoprotei 99.1 8.7E-09 3E-13 105.5 24.4 108 390-500 316-497 (668)
239 1kv9_A Type II quinohemoprotei 99.1 5.5E-09 1.9E-13 107.0 22.8 296 176-535 66-489 (668)
240 2ece_A 462AA long hypothetical 99.1 1.9E-08 6.5E-13 94.5 23.9 110 171-281 88-239 (462)
241 2ece_A 462AA long hypothetical 99.1 4.9E-08 1.7E-12 91.7 25.3 126 396-523 226-399 (462)
242 4a2l_A BT_4663, two-component 99.0 8.8E-07 3E-11 93.3 34.6 279 164-534 214-526 (795)
243 2iwa_A Glutamine cyclotransfer 99.0 2.5E-08 8.6E-13 88.0 19.1 149 383-534 70-237 (266)
244 2ad6_A Methanol dehydrogenase 99.0 4.5E-08 1.5E-12 98.1 22.8 130 390-523 318-525 (571)
245 1w6s_A Methanol dehydrogenase 99.0 6.5E-08 2.2E-12 96.8 23.5 80 436-519 451-530 (599)
246 1npe_A Nidogen, entactin; glyc 99.0 5.5E-07 1.9E-11 81.1 26.6 246 176-517 1-263 (267)
247 1k3i_A Galactose oxidase precu 99.0 2.1E-07 7.2E-12 95.5 25.8 113 169-281 190-325 (656)
248 2iwa_A Glutamine cyclotransfer 99.0 1.7E-07 5.9E-12 82.7 21.5 195 167-448 23-238 (266)
249 1w6s_A Methanol dehydrogenase 98.9 2.2E-07 7.5E-12 93.0 23.8 104 176-281 62-193 (599)
250 2ad6_A Methanol dehydrogenase 98.9 1.3E-07 4.5E-12 94.7 22.2 102 176-281 62-187 (571)
251 1flg_A Protein (quinoprotein e 98.9 1.5E-07 5E-12 94.5 20.8 80 437-521 465-545 (582)
252 3nol_A Glutamine cyclotransfer 98.9 1.7E-07 5.7E-12 81.6 18.0 136 384-523 92-243 (262)
253 4a2l_A BT_4663, two-component 98.9 3.3E-06 1.1E-10 88.9 31.6 278 167-534 175-480 (795)
254 1fwx_A Nitrous oxide reductase 98.8 5.1E-07 1.8E-11 88.0 21.2 90 438-534 254-361 (595)
255 1flg_A Protein (quinoprotein e 98.8 2.2E-06 7.6E-11 85.9 25.9 103 177-281 69-195 (582)
256 3nol_A Glutamine cyclotransfer 98.8 7.1E-07 2.4E-11 77.7 19.1 116 161-281 37-157 (262)
257 1npe_A Nidogen, entactin; glyc 98.8 5.6E-06 1.9E-10 74.4 26.1 218 165-473 36-263 (267)
258 3v9f_A Two-component system se 98.8 4.7E-05 1.6E-09 79.9 36.3 331 165-534 163-524 (781)
259 2fp8_A Strictosidine synthase; 98.7 3.9E-06 1.3E-10 77.8 23.9 135 397-536 164-315 (322)
260 3v9f_A Two-component system se 98.7 6.9E-05 2.4E-09 78.7 36.1 325 165-534 211-568 (781)
261 3nok_A Glutaminyl cyclase; bet 98.7 9.9E-07 3.4E-11 76.7 18.0 136 384-523 101-253 (268)
262 3mbr_X Glutamine cyclotransfer 98.7 2.4E-06 8.1E-11 73.8 19.9 136 384-523 70-222 (243)
263 2fp8_A Strictosidine synthase; 98.7 3.1E-06 1.1E-10 78.5 21.9 103 382-490 188-312 (322)
264 3nok_A Glutaminyl cyclase; bet 98.7 1.9E-06 6.4E-11 75.0 17.5 108 168-281 58-166 (268)
265 2p4o_A Hypothetical protein; p 98.6 5.8E-05 2E-09 69.3 28.5 235 165-482 32-279 (306)
266 2p4o_A Hypothetical protein; p 98.6 3.2E-05 1.1E-09 71.0 26.6 233 195-523 21-276 (306)
267 3v64_C Agrin; beta propeller, 98.5 0.00015 5.1E-09 67.8 28.3 240 166-499 35-283 (349)
268 2xe4_A Oligopeptidase B; hydro 98.5 7.3E-06 2.5E-10 85.3 21.2 112 166-280 175-305 (751)
269 3mbr_X Glutamine cyclotransfer 98.5 2.9E-05 9.7E-10 67.0 21.2 110 167-281 23-135 (243)
270 2xbg_A YCF48-like protein; pho 98.5 0.00068 2.3E-08 62.6 31.2 149 379-532 163-320 (327)
271 1k3i_A Galactose oxidase precu 98.4 4E-06 1.4E-10 86.0 16.8 72 210-281 189-276 (656)
272 3qqz_A Putative uncharacterize 98.4 0.00018 6.2E-09 63.0 24.3 201 164-445 26-251 (255)
273 3v65_B Low-density lipoprotein 98.4 0.00018 6.3E-09 68.2 26.6 240 166-499 78-326 (386)
274 2r14_A Morphinone reductase; H 98.4 3.8E-07 1.3E-11 85.0 6.4 112 10-121 18-214 (377)
275 1ijq_A LDL receptor, low-densi 98.3 0.001 3.4E-08 61.2 28.5 227 178-499 3-246 (316)
276 2xe4_A Oligopeptidase B; hydro 98.3 4.2E-05 1.4E-09 79.6 20.7 70 208-280 175-257 (751)
277 3p5b_L Low density lipoprotein 98.3 0.0015 5E-08 62.3 29.6 231 178-499 85-328 (400)
278 1vyr_A Pentaerythritol tetrani 98.3 9.2E-07 3.2E-11 82.2 6.9 96 10-105 12-184 (364)
279 3s94_A LRP-6, low-density lipo 98.3 0.0047 1.6E-07 62.3 33.8 383 137-535 96-511 (619)
280 3tc9_A Hypothetical hydrolase; 98.3 0.00047 1.6E-08 66.4 25.3 235 208-533 138-429 (430)
281 1z41_A YQJM, probable NADH-dep 98.3 9.6E-07 3.3E-11 81.6 6.1 95 10-105 12-167 (338)
282 3v64_C Agrin; beta propeller, 98.2 0.0011 3.7E-08 61.9 26.8 203 164-455 72-283 (349)
283 3v65_B Low-density lipoprotein 98.2 0.00075 2.6E-08 64.0 25.7 204 164-456 115-327 (386)
284 3qqz_A Putative uncharacterize 98.2 0.0014 4.8E-08 57.4 24.3 80 201-281 21-102 (255)
285 2gou_A Oxidoreductase, FMN-bin 98.2 1.5E-06 5.3E-11 80.8 5.8 96 10-105 12-184 (365)
286 4hw6_A Hypothetical protein, I 98.2 0.00095 3.3E-08 64.2 25.3 148 382-533 231-432 (433)
287 1ijq_A LDL receptor, low-densi 98.2 0.0028 9.5E-08 58.2 27.5 203 164-455 29-246 (316)
288 3sov_A LRP-6, low-density lipo 98.2 0.0015 5.1E-08 59.9 25.3 222 185-499 12-246 (318)
289 2nli_A Lactate oxidase; flavoe 98.1 3.6E-06 1.2E-10 78.3 7.1 89 11-108 76-172 (368)
290 3p5b_L Low density lipoprotein 98.1 0.0028 9.5E-08 60.3 27.1 229 147-464 92-337 (400)
291 4hw6_A Hypothetical protein, I 98.1 0.00083 2.8E-08 64.6 23.5 115 165-281 139-261 (433)
292 1icp_A OPR1, 12-oxophytodienoa 98.1 1.4E-06 4.9E-11 81.3 3.8 94 10-105 23-190 (376)
293 2nzl_A Hydroxyacid oxidase 1; 98.1 2.3E-06 8E-11 80.0 5.2 88 11-108 90-186 (392)
294 3amr_A 3-phytase; beta-propell 98.1 0.0025 8.6E-08 58.0 24.5 101 175-279 39-162 (355)
295 3tc9_A Hypothetical hydrolase; 98.1 0.00076 2.6E-08 64.9 22.3 113 165-280 137-258 (430)
296 2xzh_A Clathrin heavy chain 1; 98.1 0.0058 2E-07 54.6 28.2 252 148-494 50-335 (365)
297 1jub_A Dihydroorotate dehydrog 98.1 5.6E-06 1.9E-10 75.9 6.8 97 10-108 7-133 (311)
298 1gox_A (S)-2-hydroxy-acid oxid 98.0 8.6E-06 2.9E-10 76.1 7.2 87 11-108 67-162 (370)
299 3amr_A 3-phytase; beta-propell 98.0 0.00043 1.5E-08 63.0 17.5 133 397-533 98-262 (355)
300 3m0c_C LDL receptor, low-densi 98.0 0.0065 2.2E-07 62.8 28.1 231 178-499 397-640 (791)
301 3sov_A LRP-6, low-density lipo 98.0 0.0088 3E-07 54.8 26.3 205 163-456 33-247 (318)
302 2ism_A Putative oxidoreductase 97.9 0.0051 1.7E-07 57.4 25.0 100 165-267 31-153 (352)
303 2hsa_B 12-oxophytodienoate red 97.9 5.2E-06 1.8E-10 78.1 4.1 110 10-121 25-219 (402)
304 3ei3_A DNA damage-binding prot 97.9 0.04 1.4E-06 59.7 36.3 111 166-279 515-636 (1158)
305 3kya_A Putative phosphatase; s 97.9 0.0037 1.3E-07 60.3 23.8 153 382-537 250-478 (496)
306 1bpo_A Protein (clathrin); cla 97.9 0.015 5E-07 54.2 30.0 252 148-494 49-334 (494)
307 2xbg_A YCF48-like protein; pho 97.9 0.0097 3.3E-07 54.8 25.9 105 379-488 205-319 (327)
308 1p0k_A Isopentenyl-diphosphate 97.9 1.6E-05 5.3E-10 74.1 6.9 93 11-108 51-153 (349)
309 2vpj_A Kelch-like protein 12; 97.9 0.0018 6.1E-08 59.0 20.6 103 387-493 159-280 (301)
310 1ps9_A 2,4-dienoyl-COA reducta 97.8 1.9E-05 6.5E-10 80.9 6.5 112 10-121 12-189 (671)
311 2e6f_A Dihydroorotate dehydrog 97.8 3.3E-05 1.1E-09 70.9 7.4 99 10-108 9-135 (314)
312 2p9w_A MAL S 1 allergenic prot 97.8 0.0044 1.5E-07 55.9 20.4 106 169-274 17-163 (334)
313 2vpj_A Kelch-like protein 12; 97.8 0.0032 1.1E-07 57.3 20.1 142 387-534 112-278 (301)
314 2xn4_A Kelch-like protein 2; s 97.8 0.0021 7.3E-08 58.6 18.6 92 398-493 173-278 (302)
315 4a0p_A LRP6, LRP-6, low-densit 97.7 0.048 1.6E-06 55.0 40.0 379 138-535 93-509 (628)
316 4a0p_A LRP6, LRP-6, low-densit 97.7 0.035 1.2E-06 56.0 28.4 229 178-499 8-245 (628)
317 3m0c_C LDL receptor, low-densi 97.7 0.02 6.9E-07 59.2 26.7 117 163-279 422-546 (791)
318 3ii7_A Kelch-like protein 7; p 97.7 0.0063 2.1E-07 55.5 21.0 101 177-281 13-129 (306)
319 1n7d_A LDL receptor, low-densi 97.7 0.00014 4.6E-09 74.7 9.7 223 185-499 385-622 (699)
320 2p9w_A MAL S 1 allergenic prot 97.7 0.003 1E-07 56.9 17.1 151 382-533 16-214 (334)
321 3a9g_A Putative uncharacterize 97.6 0.04 1.4E-06 51.3 25.7 102 165-268 29-154 (354)
322 3s94_A LRP-6, low-density lipo 97.6 0.07 2.4E-06 53.8 35.9 117 165-281 84-204 (619)
323 1ep3_A Dihydroorotate dehydrog 97.6 4.4E-05 1.5E-09 70.1 4.5 97 10-107 12-137 (311)
324 1f76_A Dihydroorotate dehydrog 97.6 0.00016 5.5E-09 66.9 7.9 95 11-107 51-177 (336)
325 1vcf_A Isopentenyl-diphosphate 97.6 5.1E-05 1.7E-09 70.0 4.4 90 11-103 54-155 (332)
326 1kbi_A Cytochrome B2, L-LCR; f 97.5 0.00013 4.4E-09 70.9 7.1 88 11-107 185-285 (511)
327 1n7d_A LDL receptor, low-densi 97.5 0.00049 1.7E-08 70.6 11.7 115 164-278 405-527 (699)
328 1zgk_A Kelch-like ECH-associat 97.5 0.014 4.8E-07 53.2 19.9 102 387-493 168-289 (308)
329 3kya_A Putative phosphatase; s 97.5 0.0075 2.6E-07 58.2 18.3 151 380-533 140-340 (496)
330 1gte_A Dihydropyrimidine dehyd 97.5 0.00013 4.5E-09 78.2 6.9 112 11-123 539-688 (1025)
331 2xn4_A Kelch-like protein 2; s 97.5 0.0053 1.8E-07 55.9 16.8 142 387-535 108-277 (302)
332 3k30_A Histamine dehydrogenase 97.5 0.00026 9E-09 72.7 8.7 98 10-107 21-181 (690)
333 3ii7_A Kelch-like protein 7; p 97.4 0.0098 3.4E-07 54.2 18.0 143 387-535 101-273 (306)
334 2z6i_A Trans-2-enoyl-ACP reduc 97.4 0.00018 6E-09 66.4 5.7 91 11-107 8-100 (332)
335 3oix_A Putative dihydroorotate 97.4 0.00042 1.4E-08 63.4 7.8 105 11-122 44-177 (345)
336 1o94_A Tmadh, trimethylamine d 97.3 0.00023 8E-09 73.4 6.8 112 10-122 16-198 (729)
337 1tv5_A Dhodehase, dihydroorota 97.3 0.00061 2.1E-08 64.5 8.8 98 10-108 87-222 (443)
338 4asc_A Kelch repeat and BTB do 97.3 0.016 5.5E-07 53.0 17.8 61 178-240 7-79 (315)
339 3vkj_A Isopentenyl-diphosphate 97.2 0.00032 1.1E-08 64.9 5.7 90 11-103 55-158 (368)
340 1zgk_A Kelch-like ECH-associat 97.2 0.019 6.4E-07 52.4 17.7 142 387-535 121-288 (308)
341 3bo9_A Putative nitroalkan dio 97.1 0.00061 2.1E-08 62.5 6.5 93 10-107 21-114 (326)
342 4ef8_A Dihydroorotate dehydrog 97.1 0.0017 5.9E-08 59.6 9.4 116 2-122 31-177 (354)
343 3sre_A PON1, serum paraoxonase 97.1 0.1 3.6E-06 48.1 21.0 119 397-523 138-285 (355)
344 2xzh_A Clathrin heavy chain 1; 97.1 0.15 5.2E-06 45.7 29.3 256 185-533 48-331 (365)
345 1xi4_A Clathrin heavy chain; a 97.0 0.06 2.1E-06 58.1 20.3 231 170-495 71-335 (1630)
346 4asc_A Kelch repeat and BTB do 97.0 0.062 2.1E-06 49.0 18.6 106 173-281 43-176 (315)
347 2woz_A Kelch repeat and BTB do 96.9 0.069 2.4E-06 48.8 18.0 92 398-494 175-290 (318)
348 3pbp_A Nucleoporin NUP82; beta 96.8 0.024 8.1E-07 52.8 13.9 108 166-275 67-208 (452)
349 3ott_A Two-component system se 96.8 0.63 2.1E-05 48.4 32.2 350 166-534 192-586 (758)
350 3sre_A PON1, serum paraoxonase 96.7 0.17 5.8E-06 46.7 19.1 147 382-534 53-252 (355)
351 2uvk_A YJHT; unknown function, 96.7 0.082 2.8E-06 49.2 16.9 92 175-269 19-128 (357)
352 1bpo_A Protein (clathrin); cla 96.6 0.5 1.7E-05 44.2 31.2 256 185-533 47-330 (494)
353 2woz_A Kelch repeat and BTB do 96.5 0.22 7.4E-06 45.4 18.8 105 173-281 54-186 (318)
354 3das_A Putative oxidoreductase 96.5 0.47 1.6E-05 43.5 25.3 107 164-270 31-161 (347)
355 3pbp_A Nucleoporin NUP82; beta 96.5 0.27 9.3E-06 45.9 18.5 66 377-443 123-208 (452)
356 3ott_A Two-component system se 96.5 0.98 3.4E-05 46.9 37.0 354 165-534 146-545 (758)
357 2g8s_A Glucose/sorbosone dehyd 96.4 0.57 1.9E-05 43.4 26.7 61 471-533 288-351 (353)
358 2be1_A Serine/threonine-protei 96.4 0.033 1.1E-06 50.9 11.9 106 388-496 111-236 (339)
359 2uvk_A YJHT; unknown function, 96.4 0.26 9E-06 45.7 18.8 133 398-535 168-343 (357)
360 3sbq_A Nitrous-oxide reductase 96.4 0.8 2.7E-05 44.3 22.2 306 179-523 73-453 (638)
361 3ei3_A DNA damage-binding prot 96.3 1.7 5.9E-05 47.2 31.2 107 172-281 469-593 (1158)
362 1tl2_A L10, protein (tachylect 96.3 0.069 2.4E-06 44.9 11.8 134 390-530 6-159 (236)
363 2gjl_A Hypothetical protein PA 96.2 0.005 1.7E-07 56.6 5.2 93 8-106 8-107 (328)
364 1p4c_A L(+)-mandelate dehydrog 96.0 0.0066 2.3E-07 56.7 5.2 61 11-81 68-134 (380)
365 3zwt_A Dihydroorotate dehydrog 95.9 0.02 6.9E-07 53.0 8.0 95 11-108 56-189 (367)
366 2g8s_A Glucose/sorbosone dehyd 95.9 1.1 3.7E-05 41.5 25.5 104 164-268 17-149 (353)
367 3gr7_A NADPH dehydrogenase; fl 95.9 0.016 5.3E-07 53.3 7.1 112 10-121 12-192 (340)
368 3bw2_A 2-nitropropane dioxygen 95.6 0.023 8E-07 53.1 7.1 63 15-82 10-74 (369)
369 3kru_A NADH:flavin oxidoreduct 95.4 0.022 7.4E-07 52.2 6.1 113 10-122 11-192 (343)
370 2ism_A Putative oxidoreductase 95.4 0.27 9.4E-06 45.5 13.8 136 379-522 31-220 (352)
371 2zwa_A Leucine carboxyl methyl 95.3 0.81 2.8E-05 46.9 18.1 108 387-494 500-638 (695)
372 3l5a_A NADH/flavin oxidoreduct 95.2 0.048 1.6E-06 51.5 8.0 110 10-119 35-216 (419)
373 3sr7_A Isopentenyl-diphosphate 95.0 0.045 1.6E-06 50.4 7.0 89 11-103 82-178 (365)
374 3hgj_A Chromate reductase; TIM 94.9 0.038 1.3E-06 51.0 6.0 42 10-51 11-62 (349)
375 1tl2_A L10, protein (tachylect 94.8 0.063 2.1E-06 45.1 6.6 102 165-273 41-157 (236)
376 3a9g_A Putative uncharacterize 94.8 1.2 4E-05 41.2 16.2 137 379-523 29-216 (354)
377 3i65_A Dihydroorotate dehydrog 94.8 0.11 3.7E-06 48.5 8.8 105 11-122 90-232 (415)
378 1cru_A Protein (soluble quinop 94.6 2.6 9E-05 40.4 18.6 153 379-534 27-259 (454)
379 1ypf_A GMP reductase; GUAC, pu 94.6 0.043 1.5E-06 50.4 5.7 83 11-103 42-128 (336)
380 3s25_A Hypothetical 7-bladed b 94.5 2.6 8.8E-05 37.9 23.9 128 386-529 154-288 (302)
381 2zwa_A Leucine carboxyl methyl 94.4 2.1 7.3E-05 43.7 18.4 107 174-281 396-524 (695)
382 2be1_A Serine/threonine-protei 94.4 0.071 2.4E-06 48.7 6.5 112 389-500 11-139 (339)
383 3gka_A N-ethylmaleimide reduct 94.4 0.09 3.1E-06 48.5 7.2 42 10-51 19-68 (361)
384 1xi4_A Clathrin heavy chain; a 94.3 3.2 0.00011 45.4 19.4 88 185-279 47-134 (1630)
385 4ab4_A Xenobiotic reductase B; 94.1 0.1 3.5E-06 48.1 7.2 42 10-51 11-60 (362)
386 3das_A Putative oxidoreductase 93.7 0.54 1.9E-05 43.1 11.1 104 417-523 32-158 (347)
387 3s25_A Hypothetical 7-bladed b 93.5 4 0.00014 36.6 19.7 123 384-522 111-240 (302)
388 1mzh_A Deoxyribose-phosphate a 93.5 0.0093 3.2E-07 51.2 -1.0 77 18-105 11-95 (225)
389 3tjl_A NADPH dehydrogenase; OL 93.4 0.088 3E-06 49.1 5.4 42 10-51 21-72 (407)
390 1cru_A Protein (soluble quinop 93.0 1.3 4.6E-05 42.5 13.2 105 165-269 27-164 (454)
391 3l5l_A Xenobiotic reductase A; 91.7 0.42 1.4E-05 44.3 7.5 42 10-51 11-61 (363)
392 2wg3_C Hedgehog-interacting pr 91.6 9.8 0.00033 36.5 25.4 107 164-270 13-160 (463)
393 2wg3_C Hedgehog-interacting pr 91.1 2.5 8.4E-05 40.6 12.5 106 417-524 14-158 (463)
394 3r2g_A Inosine 5'-monophosphat 90.9 0.31 1E-05 44.7 5.6 44 10-53 37-80 (361)
395 3tjx_A Dihydroorotate dehydrog 90.7 0.99 3.4E-05 41.7 9.0 96 11-108 43-168 (354)
396 3qhy_B Beta-lactamase inhibito 90.7 8.5 0.00029 34.0 19.1 122 380-516 142-265 (282)
397 3qhy_B Beta-lactamase inhibito 87.8 14 0.00048 32.6 19.9 142 379-533 102-245 (282)
398 3sbq_A Nitrous-oxide reductase 87.2 2.2 7.7E-05 41.3 8.6 106 161-267 319-453 (638)
399 2qr6_A IMP dehydrogenase/GMP r 86.6 0.61 2.1E-05 43.9 4.6 39 10-48 62-101 (393)
400 3khj_A Inosine-5-monophosphate 86.5 1.7 5.8E-05 40.1 7.4 88 8-104 38-126 (361)
401 1eep_A Inosine 5'-monophosphat 86.5 1.6 5.4E-05 41.2 7.4 43 11-53 38-80 (404)
402 4a3u_A NCR, NADH\:flavin oxido 84.0 1.2 4.1E-05 41.1 5.2 41 10-50 11-59 (358)
403 4hvt_A Ritya.17583.B, post-pro 83.5 42 0.0014 34.2 18.1 109 423-533 295-429 (711)
404 4gq2_M Nucleoporin NUP120; bet 82.8 19 0.00065 38.3 14.3 37 463-499 238-274 (950)
405 4gbu_A NADPH dehydrogenase 1; 80.2 2.1 7.1E-05 40.2 5.3 42 10-51 24-77 (400)
406 3q6k_A 43.2 kDa salivary prote 79.7 38 0.0013 31.3 17.2 135 399-536 124-309 (381)
407 3aty_A Tcoye, prostaglandin F2 76.1 3.1 0.00011 38.6 5.1 41 10-50 14-64 (379)
408 4gq2_M Nucleoporin NUP120; bet 72.2 13 0.00046 39.4 9.4 38 165-202 236-273 (950)
409 3b7f_A Glycosyl hydrolase, BNR 70.6 67 0.0023 29.7 25.6 44 467-513 347-391 (394)
410 3b7f_A Glycosyl hydrolase, BNR 68.1 75 0.0026 29.3 28.2 93 178-272 24-140 (394)
411 3q6k_A 43.2 kDa salivary prote 66.6 81 0.0028 29.1 20.3 106 417-523 220-342 (381)
412 3zwu_A Alkaline phosphatase PH 62.3 26 0.00088 34.7 8.5 59 166-224 477-548 (592)
413 4fo4_A Inosine 5'-monophosphat 61.6 19 0.00063 33.2 6.9 33 8-40 39-71 (366)
414 3zwu_A Alkaline phosphatase PH 60.8 31 0.001 34.1 8.7 56 466-522 481-548 (592)
415 3no0_A DNA gyrase subunit A; D 59.1 91 0.0031 27.2 21.0 100 389-491 128-246 (276)
416 4fhn_B Nucleoporin NUP120; pro 58.7 83 0.0028 34.2 12.6 32 250-281 239-270 (1139)
417 4a9v_A PHOX; hydrolase, beta-p 58.4 43 0.0015 32.8 9.0 62 164-225 475-549 (592)
418 4a9v_A PHOX; hydrolase, beta-p 57.7 40 0.0014 33.0 8.7 56 466-522 481-548 (592)
419 4fhn_B Nucleoporin NUP120; pro 55.9 41 0.0014 36.7 9.5 33 467-499 244-276 (1139)
420 3uc1_A DNA gyrase subunit A; D 52.2 1.3E+02 0.0045 27.0 23.7 101 389-491 158-279 (327)
421 4hvt_A Ritya.17583.B, post-pro 50.5 2.2E+02 0.0075 29.0 22.7 92 396-490 318-429 (711)
422 3f7f_A Nucleoporin NUP120; nuc 49.9 26 0.00088 35.4 6.1 37 379-415 222-258 (729)
423 3f7f_A Nucleoporin NUP120; nuc 47.8 27 0.00094 35.2 6.0 38 165-204 222-259 (729)
424 1zi0_A DNA gyrase subunit A; b 44.0 1.7E+02 0.0059 25.9 25.9 106 174-280 1-129 (307)
425 3l6v_A GYRA, DNA gyrase subuni 43.1 2E+02 0.0068 26.4 25.5 108 172-281 3-134 (370)
426 1zvt_A Topoisomerase IV subuni 42.8 1.6E+02 0.0055 25.2 14.6 139 391-534 5-163 (256)
427 3no0_A DNA gyrase subunit A; D 42.6 1.7E+02 0.0058 25.4 19.4 111 166-279 25-146 (276)
428 2qjg_A Putative aldolase MJ040 36.9 24 0.00083 30.8 3.5 82 13-106 31-125 (273)
429 3mez_B Mannose-specific lectin 31.1 1.5E+02 0.0051 21.4 9.8 59 168-237 26-84 (113)
430 3mez_B Mannose-specific lectin 31.1 1.5E+02 0.0051 21.4 7.1 8 524-531 98-105 (113)
431 1suu_A DNA gyrase subunit A; t 26.9 3.3E+02 0.011 24.1 26.3 105 174-280 6-134 (312)
432 1q47_A Semaphorin 3A; beta pro 26.1 1.5E+02 0.0053 28.4 7.2 55 475-529 424-487 (495)
433 3al9_A Plexin-A2; beta-propell 25.4 1.6E+02 0.0054 28.8 7.2 56 473-528 414-475 (539)
434 3ffs_A Inosine-5-monophosphate 25.4 42 0.0015 31.2 3.0 33 8-40 35-67 (400)
435 1suu_A DNA gyrase subunit A; t 24.8 3.6E+02 0.012 23.8 24.7 141 389-532 115-281 (312)
436 1wp5_A Topoisomerase IV; broke 22.7 4.1E+02 0.014 23.6 18.6 196 340-539 1-230 (323)
437 4avf_A Inosine-5'-monophosphat 22.3 68 0.0023 30.9 4.0 35 6-40 33-67 (490)
438 2c6q_A GMP reductase 2; TIM ba 21.2 64 0.0022 29.4 3.3 30 11-40 53-82 (351)
439 4gz8_A Semaphorin-3A; multi-do 20.9 4E+02 0.014 26.7 9.2 60 470-529 425-495 (667)
440 4fxs_A Inosine-5'-monophosphat 20.4 81 0.0028 30.4 4.0 35 6-40 34-68 (496)
441 4gz8_A Semaphorin-3A; multi-do 20.1 6E+02 0.02 25.5 10.2 67 208-274 413-495 (667)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-49 Score=387.07 Aligned_cols=283 Identities=20% Similarity=0.299 Sum_probs=264.0
Q ss_pred eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC
Q psy18231 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 238 (540)
...+|.++|++++|+|++++|++|+.||+|+|||+.+++....+.+|.+.|++++|+|++++|++|+.|++|++||+.++
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccC
Q psy18231 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNG 318 (540)
Q Consensus 239 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
+++..+.+|...|.+++|+|++++|++|+.|++|++||++++..
T Consensus 183 ~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~------------------------------------ 226 (410)
T 1vyh_C 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC------------------------------------ 226 (410)
T ss_dssp CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE------------------------------------
T ss_pred ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE------------------------------------
Confidence 99999999999999999999999999999999999999987651
Q ss_pred ceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeC
Q psy18231 319 LLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASL 396 (540)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~ 396 (540)
+..+.+|...|.++.+++ .++++++.
T Consensus 227 ----------------------------------------------------~~~~~~h~~~v~~~~~~~~g~~l~s~s~ 254 (410)
T 1vyh_C 227 ----------------------------------------------------VKTFTGHREWVRMVRPNQDGTLIASCSN 254 (410)
T ss_dssp ----------------------------------------------------EEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ----------------------------------------------------EEEEeCCCccEEEEEECCCCCEEEEEcC
Confidence 124567888999999998 78999999
Q ss_pred CCeEEEEeCCCCceEEeeeC--CceEEEEEecC--------------------CcEEEeecCCCeEEEEeccccchhhhh
Q psy18231 397 DCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD--------------------CQCILTCSTDECLRLFDKATGELLEEY 454 (540)
Q Consensus 397 dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~--------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~ 454 (540)
|+.|++||+.+++....+.+ ..|.+++|+|+ +.+|++|+.|+.|++||+++++++..+
T Consensus 255 D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~ 334 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 (410)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 99999999999998888765 57999999996 678999999999999999999999999
Q ss_pred ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcc
Q psy18231 455 KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 455 ~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
.+|...|..+ +|+|++++|++|+.||+|++||+.+++++..+. +|...|++++|+|++.+|++++ |++|++|++.
T Consensus 335 ~~h~~~v~~v--~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 335 VGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ECCSSCEEEE--EECSSSSCEEEEETTTEEEEECCTTSCCCEEEE--CCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred ECCCCcEEEE--EEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999998888 899999999999999999999999999999998 8999999999999999999999 9999999863
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.6e-48 Score=360.35 Aligned_cols=286 Identities=18% Similarity=0.246 Sum_probs=258.9
Q ss_pred eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC
Q psy18231 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 238 (540)
...+|.+.|.+++|+|++++|++++.||+|++||+.+++.+..+..|...|.+++|+|++++|++|+.|++|++||+.++
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccC
Q psy18231 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNG 318 (540)
Q Consensus 239 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
+.+..+.+|.+.|.+++|+|++++|++|+.||+|++||++++..
T Consensus 88 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~------------------------------------ 131 (304)
T 2ynn_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA------------------------------------ 131 (304)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE------------------------------------
T ss_pred cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc------------------------------------
Confidence 99999999999999999999999999999999999999976531
Q ss_pred ceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeEeee
Q psy18231 319 LLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILTAS 395 (540)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~ 395 (540)
....+.+|...|.+++|+| ..+++++
T Consensus 132 ---------------------------------------------------~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 132 ---------------------------------------------------LEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp ---------------------------------------------------EEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred ---------------------------------------------------hhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 0114567899999999997 5799999
Q ss_pred CCCeEEEEeCCCCceEEeeeC---CceEEEEEec--CCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecC
Q psy18231 396 LDCRIRRYDIRTGNLVTDYVG---EPIVDACFTR--DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDS 470 (540)
Q Consensus 396 ~dg~i~iwd~~~~~~~~~~~~---~~i~~~~~sp--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~ 470 (540)
.|++|++||++++.....+.. ..+..+.|+| ++++|++++.|++|++||+++++++.++.+|...+..+ +|+|
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~--~~~p 238 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFA--VFHP 238 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE--EECS
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEE--EECC
Confidence 999999999998876665543 5788999987 77899999999999999999999999999999998887 8999
Q ss_pred CCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCc--EEEeecCCeeEEEEcccc
Q psy18231 471 KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNNVKLWTAEED 535 (540)
Q Consensus 471 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~--~l~s~~d~~i~iw~~~~~ 535 (540)
++++|++|+.||+|++||+.+++.+..+. .|...+.+++|+|++. ++++|+|+.+.+|++.++
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~~ 303 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLN--VGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEEC--CSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC--
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeecc--CCCccEEEEEECCCCCceEEEEecCCceEEEEeccC
Confidence 99999999999999999999999999998 8889999999999875 577777888999988764
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2e-48 Score=365.71 Aligned_cols=281 Identities=20% Similarity=0.302 Sum_probs=256.8
Q ss_pred eeeecCeEEEEeCCC----CCEEEEeeCCCcEEEEcCCCCee--EEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEE
Q psy18231 161 LFVLSGLMHTRFPVD----GSYCLTCGSDKKIKLWNPYRNLL--LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234 (540)
Q Consensus 161 ~~h~~~v~~v~~spd----g~~lat~~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd 234 (540)
.+|.++|.+++|+|+ +++|++|+.|++|+|||+.+++. ...+.+|...|.+++|+|++.++++++.|++|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 479999999999985 67999999999999999877653 456889999999999999999999999999999999
Q ss_pred cCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccc
Q psy18231 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNH 314 (540)
Q Consensus 235 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (540)
+.+++.+..+..|...+.+++|+|++++|++++.||.|++||+++++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~-------------------------------- 156 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-------------------------------- 156 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE--------------------------------
T ss_pred CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce--------------------------------
Confidence 999999999999999999999999999999999999999999987652
Q ss_pred cccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeE
Q psy18231 315 LSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEIL 392 (540)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~ 392 (540)
...+..|...|.+++|+| ++|+
T Consensus 157 --------------------------------------------------------~~~~~~~~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 157 --------------------------------------------------------EYSLDTRGKFILSIAYSPDGKYLA 180 (321)
T ss_dssp --------------------------------------------------------EEEEECSSSCEEEEEECTTSSEEE
T ss_pred --------------------------------------------------------eEEecCCCceEEEEEECCCCCEEE
Confidence 013345667899999998 8899
Q ss_pred eeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecC
Q psy18231 393 TASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDS 470 (540)
Q Consensus 393 ~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~ 470 (540)
+++.||.|++||+++++.+..+.+ .+|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|..+ +|+|
T Consensus 181 sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~--~~sp 258 (321)
T 3ow8_A 181 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV--AFCP 258 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEE--EECT
T ss_pred EEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEE--EECC
Confidence 999999999999999999988875 479999999999999999999999999999999999999999998887 8999
Q ss_pred CCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcc
Q psy18231 471 KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 471 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
++++|++++.|++|++||+.+++++..+. +|...|.+++|+|++++|++++ |++|++||.+
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHTFF--DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEc--CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999998 8999999999999999999999 9999999974
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.8e-47 Score=390.28 Aligned_cols=381 Identities=15% Similarity=0.189 Sum_probs=282.3
Q ss_pred ceeccccchhhhhhcccccceeeeecccccc---eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEee-
Q psy18231 128 LLFSLPRTITRILYELPKEWSIRVYRPLTVN---RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG- 203 (540)
Q Consensus 128 ~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~- 203 (540)
+.|+++ ....+++++.|++|++|+..+.. ...+|.+.|.+++|+|||++||+|+.|++|++||+.+++.+..+.
T Consensus 153 v~f~p~--~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~ 230 (611)
T 1nr0_A 153 VDFKPS--RPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFED 230 (611)
T ss_dssp EEECSS--SSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBC
T ss_pred EEECCC--CCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecc
Confidence 344443 23457788999999999976643 234699999999999999999999999999999999999988884
Q ss_pred ------cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeE-----------------------------------
Q psy18231 204 ------GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR----------------------------------- 242 (540)
Q Consensus 204 ------~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~----------------------------------- 242 (540)
+|.+.|++++|+|++++|++++.|++|++||+.+++.+.
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~ 310 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 310 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEE
T ss_pred ccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEe
Confidence 799999999999999999999999999999998876543
Q ss_pred --------eccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccc
Q psy18231 243 --------RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNH 314 (540)
Q Consensus 243 --------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (540)
.+.+|...|.+++|+|++++|++++.|++|++||+.++...... ...+.. .+..+.+.....
T Consensus 311 ~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~-------~~~h~~---~v~~~~~s~~~~ 380 (611)
T 1nr0_A 311 PELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF-------PDVHAT---MITGIKTTSKGD 380 (611)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS-------SCSCSS---CEEEEEECTTSC
T ss_pred CCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeec-------ccCCcc---eEEEEEECCCCc
Confidence 33579999999999999999999999999999999887532111 011222 223333333333
Q ss_pred cccCceeeEEEeeeeccc------------ccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEE
Q psy18231 315 LSNGLLTKLVFAFRCKYL------------NGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSIT 382 (540)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 382 (540)
+........+..|..... ......+.++.++...+........+++. .. +..+ .|...+.
T Consensus 381 l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~------~~-~~~~-~~~~~v~ 452 (611)
T 1nr0_A 381 LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSH------GK-LTEV-PISYNSS 452 (611)
T ss_dssp EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEET------TE-EEEE-ECSSCEE
T ss_pred EEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeC------Cc-eeee-ecCCCce
Confidence 333333333333332211 11112222233322222221122222210 01 1112 3677899
Q ss_pred EEEecC--CeeEeeeCCCeEEEEeCCCCceE--Ee-eeCCceEEEEEecCCcEEEeecCCCeEEEEeccc-cchhhh--h
Q psy18231 383 SVHVSD--HEILTASLDCRIRRYDIRTGNLV--TD-YVGEPIVDACFTRDCQCILTCSTDECLRLFDKAT-GELLEE--Y 454 (540)
Q Consensus 383 ~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~--~~-~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~-~~~~~~--~ 454 (540)
+++|+| +++++|+.|++|++||+.+++.. .. -+...|++++|+|+|++|++++.|++|++||+.+ ++.+.. +
T Consensus 453 ~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~ 532 (611)
T 1nr0_A 453 CVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW 532 (611)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCC
T ss_pred EEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeee
Confidence 999998 89999999999999999876532 22 2346899999999999999999999999999987 665544 3
Q ss_pred ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcce--eEEEeccc-ceeeeEEEEcCCCcEEEeec-CCeeEEE
Q psy18231 455 KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI--STLIHSVG-KAVVNSLCSHPTRKHIMSAC-GNNVKLW 530 (540)
Q Consensus 455 ~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~~~~~~-~~~v~~l~~s~d~~~l~s~~-d~~i~iw 530 (540)
..|...|.++ +|+|||++|++|+.|++|++||+.++... ..+. +| ...|.+++|+|+++ |++++ |++|++|
T Consensus 533 ~~H~~~V~~v--~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~--~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW 607 (611)
T 1nr0_A 533 TFHTAKVACV--SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKG--AHAMSSVNSVIWLNETT-IVSAGQDSNIKFW 607 (611)
T ss_dssp CCCSSCEEEE--EECTTSSEEEEEETTSCEEEEETTCTTSCCEEETT--SSTTSCEEEEEEEETTE-EEEEETTSCEEEE
T ss_pred eecccceeEE--EECCCCCEEEEEECCCcEEEEECCCcccccchhhc--cCcccCeeEEEEcCCCE-EEEecCCCCEEEE
Confidence 4599999888 89999999999999999999999887633 3444 78 89999999999999 99999 9999999
Q ss_pred Ecc
Q psy18231 531 TAE 533 (540)
Q Consensus 531 ~~~ 533 (540)
+++
T Consensus 608 ~~~ 610 (611)
T 1nr0_A 608 NVP 610 (611)
T ss_dssp ECC
T ss_pred ecc
Confidence 983
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.3e-47 Score=361.12 Aligned_cols=280 Identities=18% Similarity=0.334 Sum_probs=252.6
Q ss_pred eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC
Q psy18231 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 238 (540)
...+|.+.|.+++|+||+++|++|+.||+|++||..+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.++
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccC
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred c----eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccc
Q psy18231 239 Q----PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNH 314 (540)
Q Consensus 239 ~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (540)
+ ....+.+|.+.|.++.|++++. +++++.|++|++||+++++.
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~-------------------------------- 176 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQ-------------------------------- 176 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEE--------------------------------
T ss_pred CCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcE--------------------------------
Confidence 3 4556789999999999998765 88999999999999987641
Q ss_pred cccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeE
Q psy18231 315 LSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEIL 392 (540)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~ 392 (540)
...+.+|...|.+++|+| .+++
T Consensus 177 --------------------------------------------------------~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 177 --------------------------------------------------------TTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp --------------------------------------------------------EEEECCCSSCEEEEEECTTSSEEE
T ss_pred --------------------------------------------------------EEEEcCCCCceEEEEECCCCCEEE
Confidence 114567889999999998 7899
Q ss_pred eeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCc--CCcceEEEEe
Q psy18231 393 TASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SGDFRIECCL 468 (540)
Q Consensus 393 ~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~ 468 (540)
+++.|+.|++||+++++.+..+.+ ..|.+++|+|++++|++++.||.|++||+++++.+..+..+. ..+..+ +|
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~--~~ 278 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV--SF 278 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE--EE
T ss_pred EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEE--EE
Confidence 999999999999999999888865 579999999999999999999999999999888776664332 345555 89
Q ss_pred cCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEE
Q psy18231 469 DSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWT 531 (540)
Q Consensus 469 s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~ 531 (540)
+|+|++|++|+.||.|++||+.+++.+..+. +|...|.+++|+|++++|++++ |++|+|||
T Consensus 279 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~--~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLA--GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCCEEEEECCCCeEEEEEcccCcEeeEee--cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999999998 9999999999999999999999 99999996
No 6
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-46 Score=385.20 Aligned_cols=341 Identities=15% Similarity=0.201 Sum_probs=259.3
Q ss_pred ceeeeecccccc-eeeeeecCeEEEEeCCCCC-EEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEe
Q psy18231 147 WSIRVYRPLTVN-RELFVLSGLMHTRFPVDGS-YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 224 (540)
Q Consensus 147 ~~i~~~~~~~~~-~~~~h~~~v~~v~~spdg~-~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~ 224 (540)
..+++|+..... ...+|.+.|.+++|+|++. +|++|+.|++|++||..+++.+..+.+|...|++++|+|++++|+++
T Consensus 129 ~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~ 208 (611)
T 1nr0_A 129 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST 208 (611)
T ss_dssp EEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEE
Confidence 356666543221 2346888899999999886 59999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEEcCCCceeEecc-------ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhc
Q psy18231 225 ASDKSVILWEVTTGQPVRRWR-------EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEA 297 (540)
Q Consensus 225 s~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 297 (540)
+.|++|++||+.+++.+..+. +|.+.|.+++|+|++++|++++.|++|++||+++++.....
T Consensus 209 s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~----------- 277 (611)
T 1nr0_A 209 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI----------- 277 (611)
T ss_dssp ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-----------
T ss_pred ECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeee-----------
Confidence 999999999999999888874 79999999999999999999999999999999876521100
Q ss_pred CCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcc
Q psy18231 298 RDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEA 377 (540)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (540)
.... .. . .......+. ....+..+.++.+.+|+..... ....+.+|
T Consensus 278 ----------~~~~--~~-~--~~~~~~~~~------~~~l~s~s~d~~i~~~~~~~~~-------------~~~~~~gh 323 (611)
T 1nr0_A 278 ----------PVGT--RI-E--DQQLGIIWT------KQALVSISANGFINFVNPELGS-------------IDQVRYGH 323 (611)
T ss_dssp ----------ECCS--SG-G--GCEEEEEEC------SSCEEEEETTCCEEEEETTTTE-------------EEEEECCC
T ss_pred ----------cCCC--Cc-c--ceeEEEEEc------CCEEEEEeCCCcEEEEeCCCCC-------------cceEEcCC
Confidence 0000 00 0 000000010 0011222334444444432211 22345678
Q ss_pred cccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEee-----------------------------------------
Q psy18231 378 RDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDY----------------------------------------- 414 (540)
Q Consensus 378 ~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~----------------------------------------- 414 (540)
...|.+++|+| ++|++++.|+.|++||+.+++....+
T Consensus 324 ~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~ 403 (611)
T 1nr0_A 324 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSS 403 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTT
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccc
Confidence 88899999988 78888899999999988765432211
Q ss_pred -------------------------------------------eCCceEEEEEecCCcEEEeecCCCeEEEEeccccch-
Q psy18231 415 -------------------------------------------VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL- 450 (540)
Q Consensus 415 -------------------------------------------~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~- 450 (540)
....+.+++|+|||++|++|+.|++|++||+.+++.
T Consensus 404 ~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~ 483 (611)
T 1nr0_A 404 KAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVS 483 (611)
T ss_dssp SCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEE
T ss_pred ceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCcee
Confidence 012367899999999999999999999999987643
Q ss_pred -hhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecC-CcceeEEEecccceeeeEEEEcCCCcEEEeec-CCee
Q psy18231 451 -LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD-SSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNV 527 (540)
Q Consensus 451 -~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i 527 (540)
+.. .+|...|..+ +|+|||++|++++.|++|++||+.+ ++.+.......|...|.+++|+|||++|++++ |++|
T Consensus 484 ~~~~-~~h~~~v~~v--~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v 560 (611)
T 1nr0_A 484 EVKT-IVHPAEITSV--AFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV 560 (611)
T ss_dssp EEEE-EECSSCEEEE--EECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeec-cCCCCceEEE--EECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcE
Confidence 233 6788888888 8999999999999999999999987 55544312225999999999999999999999 9999
Q ss_pred EEEEcccc
Q psy18231 528 KLWTAEED 535 (540)
Q Consensus 528 ~iw~~~~~ 535 (540)
++|+++++
T Consensus 561 ~lW~~~~~ 568 (611)
T 1nr0_A 561 IVWNMNKP 568 (611)
T ss_dssp EEEETTCT
T ss_pred EEEECCCc
Confidence 99999764
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.7e-47 Score=359.81 Aligned_cols=284 Identities=16% Similarity=0.248 Sum_probs=253.1
Q ss_pred ceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC
Q psy18231 158 NRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237 (540)
Q Consensus 158 ~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 237 (540)
....+|.+.|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|++.+|++++.|+.+++|++..
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~ 137 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF 137 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred C------ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccc
Q psy18231 238 G------QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKST 311 (540)
Q Consensus 238 ~------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (540)
. .....+.+|...|.+++|+|++..|++++.||+|++||+++++.
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~----------------------------- 188 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQL----------------------------- 188 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE-----------------------------
T ss_pred cccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeE-----------------------------
Confidence 4 23456678999999999999999999999999999999987751
Q ss_pred ccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---
Q psy18231 312 KNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--- 388 (540)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--- 388 (540)
+..+.+|...|.+++++|
T Consensus 189 -----------------------------------------------------------~~~~~~h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 189 -----------------------------------------------------------LQSFHGHGADVLCLDLAPSET 209 (354)
T ss_dssp -----------------------------------------------------------EEEEECCSSCEEEEEECCCSS
T ss_pred -----------------------------------------------------------EEEEcCCCCCeEEEEEEeCCC
Confidence 124567888999999876
Q ss_pred -CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEE
Q psy18231 389 -HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIE 465 (540)
Q Consensus 389 -~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~ 465 (540)
+.+++++.||.|++||+++++++..+.+ ..|.+++|+|++++|++++.|++|++||+++++.+..+..+........
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASS 289 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeE
Confidence 5899999999999999999999888865 5799999999999999999999999999998877666654433222233
Q ss_pred EEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEE
Q psy18231 466 CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWT 531 (540)
Q Consensus 466 ~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~ 531 (540)
++|+|++++|++|+.|++|++||+.+++.+..+. +|...|++++|+|||++|++++ |++|++|+
T Consensus 290 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~--~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF--GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC--CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEeCCCCEEEEEECCCcEEEEECCCCceEEEEE--CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 4899999999999999999999999999998888 8999999999999999999999 99999996
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-47 Score=362.13 Aligned_cols=292 Identities=16% Similarity=0.156 Sum_probs=236.9
Q ss_pred eeecccccceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCC-----------CeeEEEeecCCcceeEEEEeeCC
Q psy18231 150 RVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYR-----------NLLLKTYGGHAHEVNDATAACDS 218 (540)
Q Consensus 150 ~~~~~~~~~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~-----------~~~~~~~~~h~~~v~~l~~sp~~ 218 (540)
|.|+... .....|.+.|.+++|+|||++|++++ |+++++||... .........|...|.+++|+|++
T Consensus 17 r~w~~~~-~~~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 94 (344)
T 4gqb_B 17 REWNLPP-NAPACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER 94 (344)
T ss_dssp ------C-CSCSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT
T ss_pred cccCCCC-CCcccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC
Confidence 4454333 22335677899999999999999887 77888887321 11111223367789999999985
Q ss_pred CeEEEeeCCCeEEEEEcCCCceeEe----ccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhh
Q psy18231 219 SQIASGASDKSVILWEVTTGQPVRR----WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294 (540)
Q Consensus 219 ~~l~s~s~dg~i~iwd~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 294 (540)
.|++|+.||+|+|||+++++.+.. +.+|.+.|++++|+|++++|++|+.||+|++||+++++.
T Consensus 95 -~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~------------ 161 (344)
T 4gqb_B 95 -GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV------------ 161 (344)
T ss_dssp -EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------
T ss_pred -eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE------------
Confidence 688999999999999999876544 348999999999999999999999999999999987651
Q ss_pred hhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhh
Q psy18231 295 KEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL 374 (540)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (540)
+..+
T Consensus 162 ----------------------------------------------------------------------------~~~~ 165 (344)
T 4gqb_B 162 ----------------------------------------------------------------------------LSSY 165 (344)
T ss_dssp ----------------------------------------------------------------------------EEEE
T ss_pred ----------------------------------------------------------------------------EEEE
Confidence 2256
Q ss_pred hcccccEEEEEecC---CeeEeeeCCCeEEEEeCCCCceEEeee----CCceEEEEEec-CCcEEEeecCCCeEEEEecc
Q psy18231 375 KEARDSITSVHVSD---HEILTASLDCRIRRYDIRTGNLVTDYV----GEPIVDACFTR-DCQCILTCSTDECLRLFDKA 446 (540)
Q Consensus 375 ~~~~~~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~i~~~~~sp-~~~~l~~~~~dg~i~i~d~~ 446 (540)
.+|...|.+++|++ .++++++.|++|++||+++++....+. +..+.+++|+| ++++|++|+.||.|++||++
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 78999999999988 468999999999999999999887764 35799999999 56788999999999999999
Q ss_pred ccchhhhhccCcCCcceEEEEecCCC-CeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCc-EEEeec-
Q psy18231 447 TGELLEEYKGHKSGDFRIECCLDSKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMSAC- 523 (540)
Q Consensus 447 ~~~~~~~~~~~~~~v~~~~~~~s~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~s~~- 523 (540)
+++++.++.+|...|+++ +|+|++ ++|++|+.|++|+|||+.+++.+ .+. +|.+.|++++|+|+++ +|++++
T Consensus 246 ~~~~~~~~~~h~~~v~~v--~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~--~H~~~V~~v~~sp~~~~llas~s~ 320 (344)
T 4gqb_B 246 STSCVLSSAVHSQCVTGL--VFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQ--AHRDFVRDATWSPLNHSLLTTVGW 320 (344)
T ss_dssp C--CCEEEECCSSCEEEE--EECSSSSCCEEEEETTSCEEEECTTCCEEE-EEC--CCSSCEEEEEECSSSTTEEEEEET
T ss_pred CCcEEEEEcCCCCCEEEE--EEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEc--CCCCCEEEEEEeCCCCeEEEEEcC
Confidence 999999999999999888 899998 57999999999999999888754 344 8999999999999986 567888
Q ss_pred CCeeEEEEcccccC
Q psy18231 524 GNNVKLWTAEEDYG 537 (540)
Q Consensus 524 d~~i~iw~~~~~~~ 537 (540)
|++|++|+++++..
T Consensus 321 D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 321 DHQVVHHVVPTEPL 334 (344)
T ss_dssp TSCEEEEECCC---
T ss_pred CCeEEEEECCCCCC
Confidence 99999999987643
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-47 Score=365.26 Aligned_cols=299 Identities=13% Similarity=0.121 Sum_probs=235.1
Q ss_pred cccceeeeecccccceeeeeecCeEEEEeCCCCCEEEEeeC------CCcEEEEcCCCCeeE----EEeecCCcceeEEE
Q psy18231 144 PKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGS------DKKIKLWNPYRNLLL----KTYGGHAHEVNDAT 213 (540)
Q Consensus 144 ~~~~~i~~~~~~~~~~~~~h~~~v~~v~~spdg~~lat~~~------dg~i~iwd~~~~~~~----~~~~~h~~~v~~l~ 213 (540)
..+.....|+... .....|.+.|++++|||||++||+|+. |+.|++|+..++... ....+|...|++++
T Consensus 23 ~g~~~~~~w~~p~-~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~ 101 (357)
T 4g56_B 23 NGSSKGSAWGRPV-TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVA 101 (357)
T ss_dssp ------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEE
T ss_pred CCCccccccCCCC-CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEE
Confidence 3445566776543 334579999999999999999999997 788999998776532 33456899999999
Q ss_pred EeeCCCeEEEeeCCCeEEEEEcCCCceeEe----ccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhh
Q psy18231 214 AACDSSQIASGASDKSVILWEVTTGQPVRR----WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRC 289 (540)
Q Consensus 214 ~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 289 (540)
|+|++. +++++.||+|+|||+.+++.... ..+|.+.|.+++|+|++++|++++.||+|++||+++++.
T Consensus 102 ~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~------- 173 (357)
T 4g56_B 102 WVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV------- 173 (357)
T ss_dssp EETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEE-------
T ss_pred EcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-------
Confidence 999875 56678899999999998865432 347999999999999999999999999999999987651
Q ss_pred hhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccc
Q psy18231 290 LNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNS 369 (540)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (540)
T Consensus 174 -------------------------------------------------------------------------------- 173 (357)
T 4g56_B 174 -------------------------------------------------------------------------------- 173 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhcccccEEEEEecC---CeeEeeeCCCeEEEEeCCCCceEEeeeC----CceEEEEEecC-CcEEEeecCCCeEE
Q psy18231 370 CFQALKEARDSITSVHVSD---HEILTASLDCRIRRYDIRTGNLVTDYVG----EPIVDACFTRD-CQCILTCSTDECLR 441 (540)
Q Consensus 370 ~~~~~~~~~~~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~i~~~~~sp~-~~~l~~~~~dg~i~ 441 (540)
+..+..|...|.+++|++ ..+++++.||.|++||+++++....+.. ..+.+++|+|+ +.+|++|+.|+.|+
T Consensus 174 -~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~ 252 (357)
T 4g56_B 174 -LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVS 252 (357)
T ss_dssp -EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEE
T ss_pred -EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccccee
Confidence 124567899999999987 4789999999999999999887765542 46999999997 56889999999999
Q ss_pred EEeccccchhhhhccCcCCcceEEEEecCCC-CeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcC-CCcEE
Q psy18231 442 LFDKATGELLEEYKGHKSGDFRIECCLDSKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP-TRKHI 519 (540)
Q Consensus 442 i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~~~l 519 (540)
+||+++++.+..+.+|...|..+ +|+|++ ++|++|+.|++|+|||+++++.+..+ +|.+.|++++|+| |+++|
T Consensus 253 ~wd~~~~~~~~~~~~~~~~v~~l--~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~---~H~~~V~~vafsP~d~~~l 327 (357)
T 4g56_B 253 LVNIKNPDSAQTSAVHSQNITGL--AYSYHSSPFLASISEDCTVAVLDADFSEVFRDL---SHRDFVTGVAWSPLDHSKF 327 (357)
T ss_dssp EEESSCGGGCEEECCCSSCEEEE--EECSSSSCCEEEEETTSCEEEECTTSCEEEEEC---CCSSCEEEEEECSSSTTEE
T ss_pred EEECCCCcEeEEEeccceeEEEE--EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC---CCCCCEEEEEEeCCCCCEE
Confidence 99999999999999999999888 899987 57999999999999999998877654 7999999999998 79999
Q ss_pred Eeec-CCeeEEEEcccccC
Q psy18231 520 MSAC-GNNVKLWTAEEDYG 537 (540)
Q Consensus 520 ~s~~-d~~i~iw~~~~~~~ 537 (540)
++++ |++|++|+++....
T Consensus 328 ~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 328 TTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EEEETTSCEEEEECC----
T ss_pred EEEcCCCeEEEEECCCCCc
Confidence 9999 99999999976543
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.6e-46 Score=349.42 Aligned_cols=284 Identities=29% Similarity=0.530 Sum_probs=258.8
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 239 (540)
..+|.+.|++++|+|++++|++|+.||.|++|+..+++....+.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCc
Q psy18231 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319 (540)
Q Consensus 240 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (540)
.+..+.+|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------------------------------------- 141 (312)
T 4ery_A 99 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC------------------------------------- 141 (312)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE-------------------------------------
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE-------------------------------------
Confidence 9999999999999999999999999999999999999987651
Q ss_pred eeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCC
Q psy18231 320 LTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLD 397 (540)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~d 397 (540)
...+..|...|.+++|+| .++++++.|
T Consensus 142 ---------------------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 142 ---------------------------------------------------LKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp ---------------------------------------------------EEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ---------------------------------------------------EEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 114456788999999998 789999999
Q ss_pred CeEEEEeCCCCceEEeeeC---CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEec-CCCC
Q psy18231 398 CRIRRYDIRTGNLVTDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLD-SKDS 473 (540)
Q Consensus 398 g~i~iwd~~~~~~~~~~~~---~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s-~~~~ 473 (540)
|.|++||+++++.+..+.. ..+..++|+|++++|++++.|+.|++||+++++.+..+.+|......+...++ +++.
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 250 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC
T ss_pred CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc
Confidence 9999999999988777643 57999999999999999999999999999999999999988876655443444 6788
Q ss_pred eEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec---CCeeEEEEcc
Q psy18231 474 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC---GNNVKLWTAE 533 (540)
Q Consensus 474 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~---d~~i~iw~~~ 533 (540)
+|++|+.||.|++||+.+++.+..+. +|...|.+++|+|++++|++++ |++|++|+.+
T Consensus 251 ~l~sg~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 251 WIVSGSEDNLVYIWNLQTKEIVQKLQ--GHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECCTTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEECCCCEEEEEECCCchhhhhhh--ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999999999999999998 8999999999999999999874 8999999975
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.3e-47 Score=364.02 Aligned_cols=292 Identities=20% Similarity=0.310 Sum_probs=252.2
Q ss_pred eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC
Q psy18231 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 238 (540)
...+|.+.|++++|+|++++|++|+.||+|+|||+.+++....+..|...|.+++|+|++++|++|+.|+.|++||+.+.
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999753
Q ss_pred c-------eeEeccccCCceeEEEECCC-CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecc
Q psy18231 239 Q-------PVRRWREHASKVTCVKFNED-SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310 (540)
Q Consensus 239 ~-------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (540)
. ....+.+|.+.|.++.|+|+ +..|++|+.|++|++||+++++.....
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~------------------------ 196 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF------------------------ 196 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE------------------------
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe------------------------
Confidence 2 34567899999999999996 467999999999999999887620000
Q ss_pred cccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--
Q psy18231 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-- 388 (540)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-- 388 (540)
......+|...|.++++++
T Consensus 197 -----------------------------------------------------------~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 197 -----------------------------------------------------------GSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp -----------------------------------------------------------CCCSSSSCCSCEEEEEECSSS
T ss_pred -----------------------------------------------------------ecccCCCCccCeEEEEeecCC
Confidence 0002246888999999975
Q ss_pred -CeeEeeeCCCeEEEEeCC-CCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcC-----
Q psy18231 389 -HEILTASLDCRIRRYDIR-TGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKS----- 459 (540)
Q Consensus 389 -~~l~~~~~dg~i~iwd~~-~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----- 459 (540)
+++++|+.|+.|++||++ .++.+..+.+ ..|.+++|+|++++|++++.|++|++||+++++.+..+..+..
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCS
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccc
Confidence 789999999999999998 4466666665 5799999999999999999999999999999988777655432
Q ss_pred --CcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe--cccceeeeEEEEcCCCcEEEeec-CCeeEEEEccc
Q psy18231 460 --GDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH--SVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEE 534 (540)
Q Consensus 460 --~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~ 534 (540)
.+..+ +|+|+|++|++|+.||.|++||+.+++.+..+.. .+|.+.|++++|+|||++|++|+ |++|++|++..
T Consensus 298 ~~~v~~~--~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 298 LPIVTSV--AFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SCSCSEE--EECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred cCceEEE--EECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 35666 8999999999999999999999999988877731 27999999999999999999999 99999999976
Q ss_pred c
Q psy18231 535 D 535 (540)
Q Consensus 535 ~ 535 (540)
.
T Consensus 376 ~ 376 (380)
T 3iz6_a 376 H 376 (380)
T ss_dssp S
T ss_pred C
Confidence 5
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.9e-46 Score=347.81 Aligned_cols=283 Identities=20% Similarity=0.337 Sum_probs=248.7
Q ss_pred eeeeecCeEEEEeCCCC-CEEEEeeCCCcEEEEcCCC-----CeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEE
Q psy18231 160 ELFVLSGLMHTRFPVDG-SYCLTCGSDKKIKLWNPYR-----NLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILW 233 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg-~~lat~~~dg~i~iwd~~~-----~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iw 233 (540)
..+|.+.|++++|+|++ ++|++|+.|++|++|++.. +.++..+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~w 92 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 92 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 45799999999999965 8999999999999999753 34677899999999999999999999999999999999
Q ss_pred EcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccc
Q psy18231 234 EVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKN 313 (540)
Q Consensus 234 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
|+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++...
T Consensus 93 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~-------------------------------- 140 (319)
T 3frx_A 93 DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC-------------------------------- 140 (319)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE--------------------------------
T ss_pred ECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe--------------------------------
Confidence 999999999999999999999999999999999999999999986421
Q ss_pred ccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCC----
Q psy18231 314 HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDH---- 389 (540)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---- 389 (540)
+..+.+|...|.++.+.|.
T Consensus 141 ---------------------------------------------------------~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 141 ---------------------------------------------------------LATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp ---------------------------------------------------------EEEECCCSSCEEEEEECCC----
T ss_pred ---------------------------------------------------------EEEEeccCCcEEEEEEccCCCCC
Confidence 1144578888999999872
Q ss_pred ----eeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcce
Q psy18231 390 ----EILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFR 463 (540)
Q Consensus 390 ----~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 463 (540)
.+++++.|+.|++||+++.+....+.+ ..|.+++|+|++++|++++.||.|++||+.+++.+..+..+ ..+..
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~ 242 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFS 242 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEE
Confidence 799999999999999999988887765 58999999999999999999999999999999988888765 45666
Q ss_pred EEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe------cccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 464 IECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH------SVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 464 ~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~------~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
+ +|+|++.+|++++.+ .+++|++.....+..+.. ..|...+.+++|+|||++|++++ |+.|++|++.++
T Consensus 243 ~--~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 243 L--AFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp E--EECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred E--EEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 6 899999999988765 599999988777666642 13566799999999999999999 999999999763
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-44 Score=344.05 Aligned_cols=287 Identities=17% Similarity=0.248 Sum_probs=239.2
Q ss_pred eeeeeecCeEEEEe-----CC-CCCEEEEeeCCCcEEEEcCCC-------CeeEEEeecCCcceeEEEEeeCCCeEEEee
Q psy18231 159 RELFVLSGLMHTRF-----PV-DGSYCLTCGSDKKIKLWNPYR-------NLLLKTYGGHAHEVNDATAACDSSQIASGA 225 (540)
Q Consensus 159 ~~~~h~~~v~~v~~-----sp-dg~~lat~~~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s 225 (540)
...+|.+.|++++| ++ |+++|++|+.|++|++||+.+ +.+...+.+|...|.+++|+|++.+|++++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s 95 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS 95 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc
Confidence 34579999999999 77 999999999999999999864 356778899999999999999999999999
Q ss_pred CCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEE
Q psy18231 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305 (540)
Q Consensus 226 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (540)
.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+.......
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~--------------------- 154 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFS--------------------- 154 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEE---------------------
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceee---------------------
Confidence 99999999999999999999999999999999999999999999999999986322000
Q ss_pred EeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEE
Q psy18231 306 SLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385 (540)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 385 (540)
......|...|.+++
T Consensus 155 -----------------------------------------------------------------~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 155 -----------------------------------------------------------------SAEKENHSDWVSCVR 169 (343)
T ss_dssp -----------------------------------------------------------------CCTTTSCSSCEEEEE
T ss_pred -----------------------------------------------------------------eecccCCCceeeeee
Confidence 002335777888888
Q ss_pred ecC------------CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEecccc-ch
Q psy18231 386 VSD------------HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATG-EL 450 (540)
Q Consensus 386 ~~~------------~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~-~~ 450 (540)
|+| .++++++.|+.|++||. ..+....+.+ ..|.+++|+|+|++|++|+.||.|++||+... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 887 36999999999999994 4555556654 57999999999999999999999999999544 33
Q ss_pred hhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe-----------cccceeeeEEEEcCCCcEE
Q psy18231 451 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH-----------SVGKAVVNSLCSHPTRKHI 519 (540)
Q Consensus 451 ~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-----------~~~~~~v~~l~~s~d~~~l 519 (540)
...+ .+...+..+ +|+|++.+++++ .|+.|++||+.+++....... .+|...|.+++|+|+|++|
T Consensus 249 ~~~~-~~~~~v~~v--~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 324 (343)
T 2xzm_R 249 QREF-DAGSTINQI--AFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKL 324 (343)
T ss_dssp SEEE-ECSSCEEEE--EECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCE
T ss_pred ceee-cCCCcEEEE--EECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeE
Confidence 3333 344556666 899999887655 578899999988776552221 1577889999999999999
Q ss_pred Eeec-CCeeEEEEccccc
Q psy18231 520 MSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 520 ~s~~-d~~i~iw~~~~~~ 536 (540)
++|+ ||+|++|+++++.
T Consensus 325 ~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 325 FAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp EEEETTSEEEEEEEEEEE
T ss_pred EEecCCceEEEEEEEccC
Confidence 9999 9999999998764
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-45 Score=346.93 Aligned_cols=291 Identities=18% Similarity=0.313 Sum_probs=240.6
Q ss_pred eeeeec-CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEE---EeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEc
Q psy18231 160 ELFVLS-GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLK---TYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235 (540)
Q Consensus 160 ~~~h~~-~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~---~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~ 235 (540)
..+|.+ .|.+++|+|+|++||+|+.|++|+|||+.++.... ...+|...|.+++|+|++++|++++.|++|++||+
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~ 90 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKK 90 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEc
Confidence 346777 89999999999999999999999999998876432 23689999999999999999999999999999999
Q ss_pred CCCc--eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccc
Q psy18231 236 TTGQ--PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKN 313 (540)
Q Consensus 236 ~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
..+. .+..+.+|...|.+++|+|++++|++++.|++|++||+++.....
T Consensus 91 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~----------------------------- 141 (345)
T 3fm0_A 91 NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE----------------------------- 141 (345)
T ss_dssp CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE-----------------------------
T ss_pred cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE-----------------------------
Confidence 8764 567888999999999999999999999999999999998654100
Q ss_pred ccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Cee
Q psy18231 314 HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI 391 (540)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l 391 (540)
+...+..|...|.+++|+| .+|
T Consensus 142 --------------------------------------------------------~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 142 --------------------------------------------------------CVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp --------------------------------------------------------EEEEECCCCSCEEEEEECSSSSCE
T ss_pred --------------------------------------------------------EEEEecCcCCCeEEEEECCCCCEE
Confidence 1114567889999999998 789
Q ss_pred EeeeCCCeEEEEeCCCCce--EEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccc---------------hhh
Q psy18231 392 LTASLDCRIRRYDIRTGNL--VTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGE---------------LLE 452 (540)
Q Consensus 392 ~~~~~dg~i~iwd~~~~~~--~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~---------------~~~ 452 (540)
++++.|+.|++||.++++. ...+.+ ..|.+++|+|++++|++++.|++|++||..... ++.
T Consensus 166 ~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC 245 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred EEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeE
Confidence 9999999999999988753 345554 579999999999999999999999999974321 222
Q ss_pred hhcc-CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc----eeEE---EecccceeeeEEEEcCCC-cEEEeec
Q psy18231 453 EYKG-HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ----ISTL---IHSVGKAVVNSLCSHPTR-KHIMSAC 523 (540)
Q Consensus 453 ~~~~-~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~----~~~~---~~~~~~~~v~~l~~s~d~-~~l~s~~ 523 (540)
.+.+ |...|+.+ +|++++..|++++.|+.|++|+...+.. ...+ ...+|...|++++|+|++ .+|++++
T Consensus 246 ~~~~~h~~~v~~v--~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 246 TLSGFHSRTIYDI--AWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323 (345)
T ss_dssp EECSSCSSCEEEE--EECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred EecCCCCCcEEEE--EEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence 3333 77777777 8999999999999999999999876531 1111 123789999999999998 4999999
Q ss_pred -CCeeEEEEcccccC
Q psy18231 524 -GNNVKLWTAEEDYG 537 (540)
Q Consensus 524 -d~~i~iw~~~~~~~ 537 (540)
||+|++|++.+...
T Consensus 324 ~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 324 DDGEVAFWKYQRPEG 338 (345)
T ss_dssp TTSCEEEEEECC---
T ss_pred CCCcEEEEEecCCCC
Confidence 99999999987654
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.7e-45 Score=353.44 Aligned_cols=282 Identities=22% Similarity=0.347 Sum_probs=245.2
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCc------------------ceeEEEEeeCCCeE
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAH------------------EVNDATAACDSSQI 221 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~------------------~v~~l~~sp~~~~l 221 (540)
...|.+.|.+++|+|||++||+|+ ++++++|++.+++.+..+..|.. .|.+++|+|++++|
T Consensus 60 ~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred ecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 346999999999999999999987 78999999999998888866542 48999999999999
Q ss_pred EEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCce
Q psy18231 222 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSI 301 (540)
Q Consensus 222 ~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (540)
++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++..
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~------------------ 200 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS------------------ 200 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE------------------
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE------------------
Confidence 99999999999999999999999999999999999999999999999999999999876410
Q ss_pred eEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccE
Q psy18231 302 TSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSI 381 (540)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 381 (540)
....+...+
T Consensus 201 -----------------------------------------------------------------------~~~~~~~~v 209 (393)
T 1erj_A 201 -----------------------------------------------------------------------LTLSIEDGV 209 (393)
T ss_dssp -----------------------------------------------------------------------EEEECSSCE
T ss_pred -----------------------------------------------------------------------EEEEcCCCc
Confidence 001234568
Q ss_pred EEEEecC---CeeEeeeCCCeEEEEeCCCCceEEeee---------CCceEEEEEecCCcEEEeecCCCeEEEEeccccc
Q psy18231 382 TSVHVSD---HEILTASLDCRIRRYDIRTGNLVTDYV---------GEPIVDACFTRDCQCILTCSTDECLRLFDKATGE 449 (540)
Q Consensus 382 ~~l~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~---------~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~ 449 (540)
.+++++| .++++++.|+.|++||+++++.+..+. ...|.+++|+|++++|++++.|+.|++||+++..
T Consensus 210 ~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 210 TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 8888887 789999999999999999998877662 2579999999999999999999999999997643
Q ss_pred ------------hhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcC---
Q psy18231 450 ------------LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP--- 514 (540)
Q Consensus 450 ------------~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~--- 514 (540)
+...+.+|...|..+ +|++++++|++|+.|+.|++||+.+++++..+. +|...|.+++|++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~--~h~~~v~~v~~~~~~~ 365 (393)
T 1erj_A 290 NKSDSKTPNSGTCEVTYIGHKDFVLSV--ATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ--GHRNSVISVAVANGSS 365 (393)
T ss_dssp -----------CEEEEEECCSSCEEEE--EECGGGCEEEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECSSCT
T ss_pred CcccccCCCCCcceEEEecccCcEEEE--EECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC--CCCCCEEEEEecCCcC
Confidence 344667888888777 899999999999999999999999999999998 8999999999986
Q ss_pred ---CCcEEEeec-CCeeEEEEcccc
Q psy18231 515 ---TRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 515 ---d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
++++|++++ |++|+||++++.
T Consensus 366 ~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 366 LGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred cCCCCCEEEEECCCCcEEECccccc
Confidence 689999999 999999998753
No 16
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.6e-44 Score=364.95 Aligned_cols=368 Identities=24% Similarity=0.352 Sum_probs=290.4
Q ss_pred hhhhcccccceeeeecccccc--eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEe
Q psy18231 138 RILYELPKEWSIRVYRPLTVN--RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 215 (540)
Q Consensus 138 ~~~~~~~~~~~i~~~~~~~~~--~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 215 (540)
..++..+.++.|++|+..... ....|.+.|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+
T Consensus 193 ~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~ 271 (577)
T 2ymu_A 193 QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFR 271 (577)
T ss_dssp SCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEc
Confidence 355677889999999965432 34568999999999999999999999999999995 677888999999999999999
Q ss_pred eCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhh
Q psy18231 216 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALK 295 (540)
Q Consensus 216 p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 295 (540)
|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.||+|++||+....... +.
T Consensus 272 ~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~---------~~ 341 (577)
T 2ymu_A 272 PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQT---------LT 341 (577)
T ss_dssp TTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE---------EC
T ss_pred CCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEE---------Ee
Confidence 99999999999999999996 577788889999999999999999999999999999999976543211 11
Q ss_pred hcCCceeEEEEeeccccc-ccccCceeeEEEeeee--------cccccceeeeeecccee-EEEeecccceecccccccc
Q psy18231 296 EARDSITSVHSLVKSTKN-HLSNGLLTKLVFAFRC--------KYLNGLLSGVLMSTQHL-MVLLDFLGSTQIGDVTPIS 365 (540)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 365 (540)
.+... +..+.+.+.+ .+..+.....+..|+. ......+..+.++.++. +......+...+|+.
T Consensus 342 ~~~~~---v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~---- 414 (577)
T 2ymu_A 342 GHSSS---VWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR---- 414 (577)
T ss_dssp CCSSC---EEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT----
T ss_pred CCCCC---EEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC----
Confidence 12222 2223333322 2222222223333321 11222333444444433 333334444444442
Q ss_pred cccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEE
Q psy18231 366 IHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLR 441 (540)
Q Consensus 366 ~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~ 441 (540)
....+..+.+|...|.+++|+| +++++++.|+.|++||.. ++.+..+.+ ..|.+++|+|++++|++++.|+.|+
T Consensus 415 -~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~ 492 (577)
T 2ymu_A 415 -NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 492 (577)
T ss_dssp -TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred -CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 2334556788999999999998 789999999999999974 666666654 5899999999999999999999999
Q ss_pred EEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEe
Q psy18231 442 LFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS 521 (540)
Q Consensus 442 i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s 521 (540)
+||. +++.+..+.+|...|..+ +|+|+|++|++++.||.|++|| .+++++..+. +|.+.|++++|+|||++|+|
T Consensus 493 iw~~-~~~~~~~~~~h~~~v~~l--~~s~dg~~l~s~~~dg~v~lwd-~~~~~~~~~~--~h~~~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 493 LWNR-NGQLLQTLTGHSSSVRGV--AFSPDGQTIASASDDKTVKLWN-RNGQLLQTLT--GHSSSVWGVAFSPDGQTIAS 566 (577)
T ss_dssp EEET-TSCEEEEEECCSSCEEEE--EECTTSSCEEEEETTSEEEEEC-TTSCEEEEEE--CCSSCEEEEEECTTSSCEEE
T ss_pred EEcC-CCCEEEEEeCCCCCEEEE--EEcCCCCEEEEEECcCEEEEEe-CCCCEEEEEc--CCCCCEEEEEEcCCCCEEEE
Confidence 9995 688889999999999888 8999999999999999999999 4788888888 99999999999999999999
Q ss_pred ec-CCeeEEEE
Q psy18231 522 AC-GNNVKLWT 531 (540)
Q Consensus 522 ~~-d~~i~iw~ 531 (540)
++ |++|++||
T Consensus 567 ~~~D~~i~~Wd 577 (577)
T 2ymu_A 567 ASSDKTVKLWN 577 (577)
T ss_dssp EETTSCEEEEC
T ss_pred EeCCCEEEEeC
Confidence 99 99999997
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-44 Score=336.04 Aligned_cols=285 Identities=16% Similarity=0.226 Sum_probs=229.4
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCC--eeEEEe-ec-CCcceeEEEEeeCCCeEEEeeCCCeEEEEEc
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRN--LLLKTY-GG-HAHEVNDATAACDSSQIASGASDKSVILWEV 235 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~--~~~~~~-~~-h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~ 235 (540)
..+|.++|.+++|+|+ +||+|+.|++|++||+.++ ..+..+ .+ |...|.+++|+|++++|++++.|++|+|||+
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAK 87 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEc
Confidence 4579999999999998 9999999999999999875 455556 44 9999999999999999999999999999998
Q ss_pred CC-------CceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEee
Q psy18231 236 TT-------GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLV 308 (540)
Q Consensus 236 ~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (540)
+. .+.+..+.+|...|.+++|+|++++|++++.|++|++||++......
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~------------------------ 143 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY------------------------ 143 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC------------------------
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe------------------------
Confidence 53 34567788999999999999999999999999999999995432100
Q ss_pred cccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC
Q psy18231 309 KSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD 388 (540)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 388 (540)
.++..+.+|...|.+++|+|
T Consensus 144 ------------------------------------------------------------~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 144 ------------------------------------------------------------ECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp ------------------------------------------------------------EEEEEECCCSSCEEEEEECS
T ss_pred ------------------------------------------------------------EEEEEeccCCCceEEEEECC
Confidence 01124567899999999998
Q ss_pred --CeeEeeeCCCeEEEEeCCCC--ceEEeeeC--CceEEEEEecC--CcEEEeecCCCeEEEEecccc--------chhh
Q psy18231 389 --HEILTASLDCRIRRYDIRTG--NLVTDYVG--EPIVDACFTRD--CQCILTCSTDECLRLFDKATG--------ELLE 452 (540)
Q Consensus 389 --~~l~~~~~dg~i~iwd~~~~--~~~~~~~~--~~i~~~~~sp~--~~~l~~~~~dg~i~i~d~~~~--------~~~~ 452 (540)
.+|++++.|++|++||..++ +++..+.+ ..|.+++|+|+ +.+|++++.|++|++||+..+ ....
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEee
Confidence 78999999999999999876 56666765 57999999998 778999999999999999765 3344
Q ss_pred hhcc-CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc--eeEEEecccce-eeeEEEEcC--CCcEEEeec-CC
Q psy18231 453 EYKG-HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ--ISTLIHSVGKA-VVNSLCSHP--TRKHIMSAC-GN 525 (540)
Q Consensus 453 ~~~~-~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~~~-~v~~l~~s~--d~~~l~s~~-d~ 525 (540)
.+.. |...|..+ +|++++ +|++++.||.|++||..+++. .... ...|.. .|++++|+| ++++|++++ ||
T Consensus 244 ~~~~~h~~~v~~v--~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~-~~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 244 ILPDVHKRQVYNV--AWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKR-ALCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp ECCSCCSSCEEEE--EECTTS-CEEEEETTSCEEEEEEETTEEEEEEEE-SCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred ecccccccceEEE--EEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecc-ccccccceEEEEEEecCCCceEEEEecCCC
Confidence 4544 88888887 788654 899999999999999987742 2222 126776 899999999 789999999 99
Q ss_pred eeEEEEccc
Q psy18231 526 NVKLWTAEE 534 (540)
Q Consensus 526 ~i~iw~~~~ 534 (540)
+|+||++++
T Consensus 320 ~v~~W~~~~ 328 (330)
T 2hes_X 320 IVNFWSLEK 328 (330)
T ss_dssp EEEEEEC--
T ss_pred cEEEEEecc
Confidence 999999865
No 18
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-43 Score=343.54 Aligned_cols=270 Identities=24% Similarity=0.395 Sum_probs=239.9
Q ss_pred cceeccccchhhhhhcccccceeeeecccccc---eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEee
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRPLTVN---RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG 203 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~ 203 (540)
.+.|+++ ...+++++.|++|++|+..+.. ...+|.+.|.+++|+|++++|++|+.|++|++||+.+++.+..+.
T Consensus 113 ~~~~~p~---~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~ 189 (410)
T 1vyh_C 113 RVIFHPV---FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH 189 (410)
T ss_dssp EEEECSS---SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC
T ss_pred EEEEcCC---CCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc
Confidence 3445554 3467788999999999987754 345699999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCC
Q psy18231 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 283 (540)
Q Consensus 204 ~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 283 (540)
+|...|.+++|+|++++|++|+.|++|++||+++++++..+.+|...|.++.|+|++.+|++++.||+|++||+.+++..
T Consensus 190 ~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 190 GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876520
Q ss_pred CcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccc
Q psy18231 284 PIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTP 363 (540)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (540)
T Consensus 270 -------------------------------------------------------------------------------- 269 (410)
T 1vyh_C 270 -------------------------------------------------------------------------------- 269 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccchhhhhhcccccEEEEEecC----------------------CeeEeeeCCCeEEEEeCCCCceEEeeeC--Cce
Q psy18231 364 ISIHNSCFQALKEARDSITSVHVSD----------------------HEILTASLDCRIRRYDIRTGNLVTDYVG--EPI 419 (540)
Q Consensus 364 ~~~~~~~~~~~~~~~~~v~~l~~~~----------------------~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i 419 (540)
..+..|...|.+++|+| .++++|+.|+.|++||+++++++..+.+ ..|
T Consensus 270 --------~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v 341 (410)
T 1vyh_C 270 --------AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341 (410)
T ss_dssp --------EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred --------eEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE
Confidence 12334455555555544 4799999999999999999999988876 479
Q ss_pred EEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEe
Q psy18231 420 VDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489 (540)
Q Consensus 420 ~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~ 489 (540)
.+++|+|++++|++++.|+.|++||+.+++++..+.+|...|+++ +|+|++.+|++|+.||+|++|++
T Consensus 342 ~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l--~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL--DFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEE--EECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEE--EEcCCCCEEEEEeCCCcEEEEeC
Confidence 999999999999999999999999999999999999999999888 89999999999999999999986
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-42 Score=355.05 Aligned_cols=351 Identities=25% Similarity=0.364 Sum_probs=266.9
Q ss_pred ceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC
Q psy18231 158 NRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237 (540)
Q Consensus 158 ~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 237 (540)
++..+|.+.|++++|||||++||+|+.|++|+|||. +++++.++.+|.+.|++++|+||+++|++++.|++|+|||+ +
T Consensus 10 ~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~ 87 (577)
T 2ymu_A 10 NRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-N 87 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-T
T ss_pred eEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-C
Confidence 456789999999999999999999999999999994 78899999999999999999999999999999999999996 6
Q ss_pred CceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccc-
Q psy18231 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLS- 316 (540)
Q Consensus 238 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 316 (540)
++.+..+.+|...|.+++|+|++++|++++.|+.+++|+......... ......+. .....+.....
T Consensus 88 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~---------~~~~~~v~---~~~~~~~~~~~~ 155 (577)
T 2ymu_A 88 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL---------TGHSSSVW---GVAFSPDGQTIA 155 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEE---------CCCSSCEE---EEEECTTSSCEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeec---------cCCCCcee---eeeeecCCccce
Confidence 788899999999999999999999999999999999999765431110 01111111 11111111110
Q ss_pred cCceeeEEEee--------eecccccceeeeeeccce-eEEEeecccceecccccccccccchhhhhhcccccEEEEEec
Q psy18231 317 NGLLTKLVFAF--------RCKYLNGLLSGVLMSTQH-LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVS 387 (540)
Q Consensus 317 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 387 (540)
..........+ ........+.......++ .+......+...+|+. .......+.+|...|.+++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-----~~~~~~~~~~~~~~v~~~~~s 230 (577)
T 2ymu_A 156 SASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-----NGQLLQTLTGHSSSVRGVAFS 230 (577)
T ss_dssp EEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-----TSCEEEEEECCSSCEEEEEEC
T ss_pred ecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-----CCcEEEEEecCCCCEEEEEEC
Confidence 00000000000 001111122222222222 2222233333333332 223344677899999999999
Q ss_pred C--CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcce
Q psy18231 388 D--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFR 463 (540)
Q Consensus 388 ~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 463 (540)
| ..+++++.|+.|++||.. ++.+..+.+ ..|.+++|+|+++.+++++.|+.|++||. +++.+..+.+|...+..
T Consensus 231 ~dg~~l~~~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~ 308 (577)
T 2ymu_A 231 PDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWG 308 (577)
T ss_dssp TTSSCEEEEETTSCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEE
Confidence 8 789999999999999965 566666654 57999999999999999999999999996 56777888999999888
Q ss_pred EEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEccc
Q psy18231 464 IECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEE 534 (540)
Q Consensus 464 ~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~ 534 (540)
+ +|+|++++|++++.|+.|++||+. ++.+..+. .|...|.+++|+|++++|++++ |+.|++|+...
T Consensus 309 ~--~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~ 375 (577)
T 2ymu_A 309 V--AFSPDGQTIASASDDKTVKLWNRN-GQHLQTLT--GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG 375 (577)
T ss_dssp E--EECTTSSEEEEEETTSCEEEEETT-SCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC
T ss_pred E--EECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEe--CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC
Confidence 7 899999999999999999999964 55566666 8999999999999999999999 99999999653
No 20
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-42 Score=339.99 Aligned_cols=336 Identities=18% Similarity=0.197 Sum_probs=260.5
Q ss_pred eeeeecCeEEEEeCCCCC-EEEEeeCCCcEEEEcC----CCCe------eEEEeec----------CCcceeEEEEeeCC
Q psy18231 160 ELFVLSGLMHTRFPVDGS-YCLTCGSDKKIKLWNP----YRNL------LLKTYGG----------HAHEVNDATAACDS 218 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~-~lat~~~dg~i~iwd~----~~~~------~~~~~~~----------h~~~v~~l~~sp~~ 218 (540)
...|.++|++++|+|+++ +||+|+.||.|++||+ .+++ ....+.. |.+.|++++|+|++
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 345779999999999999 9999999999999999 8887 5555554 68899999999999
Q ss_pred CeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcC
Q psy18231 219 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEAR 298 (540)
Q Consensus 219 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 298 (540)
++|++++.||.|++|| .+++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++..... ....
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~------ 191 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHF--ELKE------ 191 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE--CCC-------
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe--eccc------
Confidence 9999999999999999 678888899999999999999999999999999999999999876521111 0000
Q ss_pred CceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhccc
Q psy18231 299 DSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEAR 378 (540)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (540)
........... .........+.+..++.+......+...++++... .....+..|.
T Consensus 192 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~----~~~~~~~~~~ 247 (425)
T 1r5m_A 192 TGGSSINAENH--------------------SGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK----TPTGKLIGHH 247 (425)
T ss_dssp ----------------------------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS----SCSEEECCCS
T ss_pred cCccceeeccc--------------------cCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC----ceeeeeccCC
Confidence 00000000000 00000011111222223333333333333333221 2233456788
Q ss_pred ccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhh
Q psy18231 379 DSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 454 (540)
Q Consensus 379 ~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 454 (540)
..|.+++|+| .++++++.|+.|++||+++++.+..+.. ..+.+++|+|++ ++++++.|+.|++||+.+++.+..+
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 9999999998 7899999999999999999988877754 689999999999 9999999999999999999999999
Q ss_pred ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCc--------------------ceeEEEecccce--eeeEEEE
Q psy18231 455 KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS--------------------QISTLIHSVGKA--VVNSLCS 512 (540)
Q Consensus 455 ~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~--------------------~~~~~~~~~~~~--~v~~l~~ 512 (540)
..|...+..+ +|+|++++|++++.||.|++||+.+++ .+..+. .|.. .|++++|
T Consensus 327 ~~~~~~i~~~--~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~ 402 (425)
T 1r5m_A 327 IVDGVPIFAG--RISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ--SSQDNDYIFDLSW 402 (425)
T ss_dssp ECTTCCEEEE--EECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEEC--CTTCCCCEEEEEE
T ss_pred ccCCccEEEE--EEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc--CcccCCceEEEEc
Confidence 9999888877 899999999999999999999999887 777777 7766 9999999
Q ss_pred cCCCcEEEeec-CCeeEEEEcc
Q psy18231 513 HPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 513 s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
+|++++|++++ ||.|++|+++
T Consensus 403 s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 403 NCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CTTSSEEEEEESSSCCEEEECC
T ss_pred cCCCceEEEEecCceEEEEeec
Confidence 99999999999 9999999986
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.6e-43 Score=328.56 Aligned_cols=263 Identities=17% Similarity=0.247 Sum_probs=241.7
Q ss_pred hhhhhcccccceeeeecccccc-----eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeE
Q psy18231 137 TRILYELPKEWSIRVYRPLTVN-----RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVND 211 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~-----~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 211 (540)
...+++++.|++|++|+..... ...+|...|.+++|+|++.++++++.|++|++||+.+++.+..+..|...+.+
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~ 127 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT 127 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCC
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEE
Confidence 4567889999999999976543 23569999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhh
Q psy18231 212 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291 (540)
Q Consensus 212 l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 291 (540)
++|+|++++|++++.||.|++||+++++....+..|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 128 ~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~--------- 198 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL--------- 198 (321)
T ss_dssp EEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---------
T ss_pred EEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999987641
Q ss_pred HhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchh
Q psy18231 292 EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF 371 (540)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (540)
+
T Consensus 199 -------------------------------------------------------------------------------~ 199 (321)
T 3ow8_A 199 -------------------------------------------------------------------------------L 199 (321)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------E
Confidence 1
Q ss_pred hhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccc
Q psy18231 372 QALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKAT 447 (540)
Q Consensus 372 ~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~ 447 (540)
..+.+|...|.+++|+| .+|++++.|+.|++||+++++....+.+ ..|.+++|+|++++|++++.|++|++||+.+
T Consensus 200 ~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 200 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp EEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 24567888999999998 7899999999999999999998888876 4699999999999999999999999999999
Q ss_pred cchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEe
Q psy18231 448 GELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489 (540)
Q Consensus 448 ~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~ 489 (540)
++++.++.+|...|..+ +|+|++++|++++.||+|++||.
T Consensus 280 ~~~~~~~~~h~~~v~~v--~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 280 RTCVHTFFDHQDQVWGV--KYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp TEEEEEECCCSSCEEEE--EECTTSSEEEEEETTCCEEEEEC
T ss_pred CEEEEEEcCCCCcEEEE--EECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999999888 89999999999999999999995
No 22
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-44 Score=349.43 Aligned_cols=308 Identities=14% Similarity=0.199 Sum_probs=260.2
Q ss_pred cccceeeeecccccc-----eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCC----CeeEEEeecCCcceeEEEE
Q psy18231 144 PKEWSIRVYRPLTVN-----RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYR----NLLLKTYGGHAHEVNDATA 214 (540)
Q Consensus 144 ~~~~~i~~~~~~~~~-----~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~ 214 (540)
+.++.|++|+..+.. ....|...|.+++|+|++++|++++.||.|++||+.+ .+.+..+.+|...|++++|
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE
Confidence 788999999987653 3356899999999999999999999999999999987 4588889999999999999
Q ss_pred eeC-CCeEEEeeCCCeEEEEEcCCCc------eeEe---ccccCCceeEEEECCC-CCEEEEecCCCcEEEEEecCCCCC
Q psy18231 215 ACD-SSQIASGASDKSVILWEVTTGQ------PVRR---WREHASKVTCVKFNED-SSVVISGSQDNTVMMWDVKSRSHH 283 (540)
Q Consensus 215 sp~-~~~l~s~s~dg~i~iwd~~~~~------~~~~---~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~ 283 (540)
+|+ +++|++++.|+.|++||+.+++ .... +..|...|.+++|+|+ +.+|++++.||.|++||+++++..
T Consensus 122 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 201 (416)
T 2pm9_A 122 NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV 201 (416)
T ss_dssp CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE
T ss_pred cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc
Confidence 998 8999999999999999999886 3332 4679999999999998 789999999999999999876520
Q ss_pred CcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccc
Q psy18231 284 PIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTP 363 (540)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (540)
... .
T Consensus 202 ~~~----------------------------------------------------------------~------------ 205 (416)
T 2pm9_A 202 IHL----------------------------------------------------------------S------------ 205 (416)
T ss_dssp EEE----------------------------------------------------------------C------------
T ss_pred eEE----------------------------------------------------------------e------------
Confidence 000 0
Q ss_pred cccccchhhhhhcccccEEEEEecC---CeeEeeeCCC---eEEEEeCCCC-ceEEeee-C--CceEEEEEec-CCcEEE
Q psy18231 364 ISIHNSCFQALKEARDSITSVHVSD---HEILTASLDC---RIRRYDIRTG-NLVTDYV-G--EPIVDACFTR-DCQCIL 432 (540)
Q Consensus 364 ~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~~dg---~i~iwd~~~~-~~~~~~~-~--~~i~~~~~sp-~~~~l~ 432 (540)
......+|...|.+++|+| .++++++.|+ .|++||++++ +.+..+. + ..|.+++|+| ++++|+
T Consensus 206 ------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 206 ------YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLL 279 (416)
T ss_dssp ------CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEE
T ss_pred ------ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEE
Confidence 0001124478899999998 4799999998 9999999986 5555555 3 5799999999 999999
Q ss_pred eecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCC-CeEEEeeCCCcEEEEEecCCcceeEEE------------
Q psy18231 433 TCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKD-SQIFCGSSDGKIYKWQLVDSSQISTLI------------ 499 (540)
Q Consensus 433 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~------------ 499 (540)
+++.|+.|++||+++++.+..+..|...+..+ +|+|++ .+|++++.||.|++||+.+.+......
T Consensus 280 s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~--~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 357 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESAEQLSQFPARGNWCFKT--KFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETD 357 (416)
T ss_dssp EEESSSEEEEECSSSCCEEEEEECSSSCCCCE--EECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------------
T ss_pred EEeCCCCEEEeeCCCCccceeecCCCCceEEE--EECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccc
Confidence 99999999999999999999999999999988 899999 899999999999999998765433221
Q ss_pred ---ec------------------ccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 500 ---HS------------------VGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 500 ---~~------------------~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
.. .|..++.+++|+|||++|++++ |++|+||++.++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 358 FWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp ---------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 00 1667888999999999999999 999999999864
No 23
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-42 Score=328.78 Aligned_cols=295 Identities=18% Similarity=0.283 Sum_probs=259.2
Q ss_pred eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC
Q psy18231 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 238 (540)
...+|.+.|++++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.++
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEeccccCCceeEEEECCCCCEEEEecCC-----CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccc
Q psy18231 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQD-----NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKN 313 (540)
Q Consensus 239 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
+.+..+. |...|.+++|+|+++++++++.+ |.|++||+...........
T Consensus 107 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~------------------------- 160 (369)
T 3zwl_B 107 QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK------------------------- 160 (369)
T ss_dssp CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE-------------------------
T ss_pred cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc-------------------------
Confidence 9998887 88999999999999999999998 9999999987753111100
Q ss_pred ccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccc--cEEEEEecC--C
Q psy18231 314 HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARD--SITSVHVSD--H 389 (540)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~l~~~~--~ 389 (540)
........+..|.. .+.+++|+| +
T Consensus 161 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 161 ----------------------------------------------------VSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp ----------------------------------------------------ECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred ----------------------------------------------------cccceeeeccCCcCccceeEEEEcCCCC
Confidence 00001112334444 899999998 7
Q ss_pred eeEeeeCCCeEEEEeCCC-CceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEE
Q psy18231 390 EILTASLDCRIRRYDIRT-GNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 466 (540)
Q Consensus 390 ~l~~~~~dg~i~iwd~~~-~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 466 (540)
.+++++.||.|++||+++ ++.+..+.. ..|.+++|+|++++|++++.|+.|++||+++++.+..+. +...+..+
T Consensus 189 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~-- 265 (369)
T 3zwl_B 189 YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTA-- 265 (369)
T ss_dssp EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEE--
T ss_pred EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeE--
Confidence 899999999999999998 677777764 689999999999999999999999999999998888877 55666666
Q ss_pred EecCCCCeEEEeeCCC--------------cEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEE
Q psy18231 467 CLDSKDSQIFCGSSDG--------------KIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWT 531 (540)
Q Consensus 467 ~~s~~~~~l~s~s~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~ 531 (540)
+|+|+++++++++.++ .+++||+.+++.+..+. +|...|++++|+|++++|++++ ||.|++|+
T Consensus 266 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 266 VITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ--GHFGPLNTVAISPQGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp EECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEE--CCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee--cccCcEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 8999999999999988 89999999999999998 8999999999999999999999 99999999
Q ss_pred ccccc
Q psy18231 532 AEEDY 536 (540)
Q Consensus 532 ~~~~~ 536 (540)
++++.
T Consensus 344 ~~~~~ 348 (369)
T 3zwl_B 344 FEKSY 348 (369)
T ss_dssp ECHHH
T ss_pred Ccccc
Confidence 98753
No 24
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3e-42 Score=327.70 Aligned_cols=286 Identities=20% Similarity=0.323 Sum_probs=247.0
Q ss_pred eeeeecCeEEEEeCCC-CCEEEEeeCCCcEEEEcCCCC-----eeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEE
Q psy18231 160 ELFVLSGLMHTRFPVD-GSYCLTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILW 233 (540)
Q Consensus 160 ~~~h~~~v~~v~~spd-g~~lat~~~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iw 233 (540)
..+|.+.|++|+|+|+ +++||||+.|++|+|||+.+. .+...+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 4579999999999997 689999999999999998764 3567889999999999999999999999999999999
Q ss_pred EcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccc
Q psy18231 234 EVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKN 313 (540)
Q Consensus 234 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
+............+...+....+++++++|++++.|+.+++||+.....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~------------------------------- 162 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK------------------------------- 162 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE-------------------------------
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce-------------------------------
Confidence 9999988888888999999999999999999999999999999765431
Q ss_pred ccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC----C
Q psy18231 314 HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD----H 389 (540)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~ 389 (540)
......+|...+..+++++ .
T Consensus 163 --------------------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 163 --------------------------------------------------------YTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp --------------------------------------------------------EEECSSSCSSCEEEEEECSCSSSC
T ss_pred --------------------------------------------------------EEEEeccccCcccceEEccCCCCc
Confidence 0013456788889998876 5
Q ss_pred eeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEE
Q psy18231 390 EILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC 467 (540)
Q Consensus 390 ~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 467 (540)
.+++++.|+.|++||+++++.+..+.+ ..|++++|+|++++|++++.|+.|++||+++.+.+..+..+. .+..+ +
T Consensus 187 ~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~v~~~--~ 263 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINAL--C 263 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-CEEEE--E
T ss_pred EEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-eEEee--e
Confidence 678999999999999999999888865 579999999999999999999999999999999888887654 56655 7
Q ss_pred ecCCCCeEEEeeCCCcEEEEEecCCcceeEEE-------ecccceeeeEEEEcCCCcEEEeec-CCeeEEEEccccc
Q psy18231 468 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-------HSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 468 ~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~~ 536 (540)
|+|++. +++++.|+.|++||++++..+..+. ...|...|++++|+||+++|++|+ ||.|+|||+++|.
T Consensus 264 ~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 264 FSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred cCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 888765 5566779999999998877665553 126888999999999999999999 9999999999874
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.8e-42 Score=325.77 Aligned_cols=279 Identities=13% Similarity=0.189 Sum_probs=247.1
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCee---EEEee--cCCcceeEEEEeeCCCeEEEeeCCCeEEEEE
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLL---LKTYG--GHAHEVNDATAACDSSQIASGASDKSVILWE 234 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~---~~~~~--~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd 234 (540)
...|.+.|.+++|+|++++|++++ ||.|++||+.+++. +..+. +|...|.+++|+|++++|++++.|+.|++||
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 456999999999999999999999 99999999987643 33333 7999999999999999999999999999999
Q ss_pred cCCCc--eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccc
Q psy18231 235 VTTGQ--PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTK 312 (540)
Q Consensus 235 ~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
+.+++ ....+..|...|.+++|+|+++++++++.||.|++||+++++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~------------------------------ 175 (337)
T 1gxr_A 126 LAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL------------------------------ 175 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------------------------
T ss_pred CCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce------------------------------
Confidence 99887 5667788999999999999999999999999999999987541
Q ss_pred cccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Ce
Q psy18231 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HE 390 (540)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~ 390 (540)
...+..|...|.+++|+| +.
T Consensus 176 ----------------------------------------------------------~~~~~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 176 ----------------------------------------------------------VRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp ----------------------------------------------------------EEEECCCSSCEEEEEECTTSSE
T ss_pred ----------------------------------------------------------eeeeecccCceEEEEECCCCCE
Confidence 113456788999999998 78
Q ss_pred eEeeeCCCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEec
Q psy18231 391 ILTASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLD 469 (540)
Q Consensus 391 l~~~~~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s 469 (540)
+++++.||.|++||+++++.+..+.. ..+.+++|+|+++++++++.|+.|++||+.+++. ..+..|...+..+ +|+
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~--~~~ 274 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSL--KFA 274 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEE--EEC
T ss_pred EEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEE--EEC
Confidence 99999999999999999988877764 6899999999999999999999999999988765 3567788888877 899
Q ss_pred CCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcc
Q psy18231 470 SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 470 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
|++++|++++.||.|++||+.+++.+... .|...|.+++|+|++++|++++ ||.|++|++.
T Consensus 275 ~~~~~l~~~~~dg~i~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 275 YCGKWFVSTGKDNLLNAWRTPYGASIFQS---KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEE---ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCCCEEEEecCCCcEEEEECCCCeEEEEe---cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 99999999999999999999999888555 4888999999999999999999 9999999973
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=327.10 Aligned_cols=244 Identities=17% Similarity=0.234 Sum_probs=207.1
Q ss_pred eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEE----eecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcC
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKT----YGGHAHEVNDATAACDSSQIASGASDKSVILWEVT 236 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~----~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 236 (540)
..|...|.+++|+||+ .|++|+.||+|+|||+.+++.+.. +.+|.+.|++++|+|++++|++|+.|++|++||++
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 4577889999999996 678999999999999998865443 45899999999999999999999999999999999
Q ss_pred CCceeEeccccCCceeEEEECCCC-CEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccc
Q psy18231 237 TGQPVRRWREHASKVTCVKFNEDS-SVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHL 315 (540)
Q Consensus 237 ~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (540)
+++++..+.+|.+.|.+++|++++ .+|++++.||+|++||+++++.....
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~----------------------------- 208 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI----------------------------- 208 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC-----------------------------
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee-----------------------------
Confidence 999999999999999999999987 47899999999999999887621100
Q ss_pred ccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeE
Q psy18231 316 SNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEIL 392 (540)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~ 392 (540)
....+...+.+++|+| .+++
T Consensus 209 ---------------------------------------------------------~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 209 ---------------------------------------------------------GCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp ---------------------------------------------------------C----CCCEEEEEECSSCTTEEE
T ss_pred ---------------------------------------------------------ecceeeccceeeeecCCCCcceE
Confidence 1234456788999987 5788
Q ss_pred eeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCC-cEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEec
Q psy18231 393 TASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDC-QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLD 469 (540)
Q Consensus 393 ~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s 469 (540)
+|+.||.|++||+++++++..+.+ ..|++++|+|++ ++|++|+.|++|+|||+.+++.+ .+.+|...|+++ +|+
T Consensus 232 sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v--~~s 308 (344)
T 4gqb_B 232 FGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDA--TWS 308 (344)
T ss_dssp EEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEE--EEC
T ss_pred EeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEE--EEe
Confidence 999999999999999999888876 579999999998 57999999999999999988765 578999999888 899
Q ss_pred CCCCe-EEEeeCCCcEEEEEecCCcc
Q psy18231 470 SKDSQ-IFCGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 470 ~~~~~-l~s~s~dg~i~iwd~~~~~~ 494 (540)
|+++. |++++.||+|++|++.+...
T Consensus 309 p~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 309 PLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 99875 77999999999999876543
No 27
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-42 Score=366.19 Aligned_cols=399 Identities=10% Similarity=0.048 Sum_probs=276.6
Q ss_pred Ccceeccccchhhhhhcccccceeeeecccccce--eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeE----
Q psy18231 126 HPLLFSLPRTITRILYELPKEWSIRVYRPLTVNR--ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLL---- 199 (540)
Q Consensus 126 ~~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~---- 199 (540)
..+.|++ ...+++++.+++|++|+..+... ...|.+.|++++|+|++++|++|+.||+|++||+.+++..
T Consensus 62 ~~l~fsp----g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i 137 (902)
T 2oaj_A 62 KEMRFVK----GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL 137 (902)
T ss_dssp EEEEEET----TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEE
T ss_pred EEEEEcC----CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccccee
Confidence 3455565 23677889999999999877543 3457789999999999999999999999999999988764
Q ss_pred -------EEeecCCcceeEEEEeeC-CCeEEEeeCCCeEEEEEcCCCceeEecccc------------------CCceeE
Q psy18231 200 -------KTYGGHAHEVNDATAACD-SSQIASGASDKSVILWEVTTGQPVRRWREH------------------ASKVTC 253 (540)
Q Consensus 200 -------~~~~~h~~~v~~l~~sp~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h------------------~~~v~~ 253 (540)
..+.+|.+.|++++|+|+ +..|++|+.||+| +||+++++.+..+..| ...|.+
T Consensus 138 ~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~ 216 (902)
T 2oaj_A 138 DNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQ 216 (902)
T ss_dssp CCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEE
T ss_pred ccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEE
Confidence 234679999999999995 5789999999999 9999999988877655 578999
Q ss_pred EEECCCCCEEEEecCCCcEEEEEecCCCCCCcchh---hhhHhh----h---hcCCceeEEEEeec-ccc--cccccCce
Q psy18231 254 VKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR---CLNEAL----K---EARDSITSVHSLVK-STK--NHLSNGLL 320 (540)
Q Consensus 254 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~----~---~~~~~~~~~~~~~~-~~~--~~~~~~~~ 320 (540)
++|+|+|++|++++.||+|++||+++++....... ...... . .....+..+..... .++ ..+..+..
T Consensus 217 v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~ 296 (902)
T 2oaj_A 217 SLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKS 296 (902)
T ss_dssp EEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEEC
T ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCC
Confidence 99999999999999999999999988763211000 000000 0 01112233322211 111 11111100
Q ss_pred e-----eEEEeeeec------------------------cc----ccce--------------------eeeeeccceeE
Q psy18231 321 T-----KLVFAFRCK------------------------YL----NGLL--------------------SGVLMSTQHLM 347 (540)
Q Consensus 321 ~-----~~~~~~~~~------------------------~~----~~~~--------------------~~~~~~~~~~~ 347 (540)
. ..+..+... .. ...+ ..+....++.+
T Consensus 297 ~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l 376 (902)
T 2oaj_A 297 ISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEI 376 (902)
T ss_dssp STTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCE
T ss_pred CCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcE
Confidence 0 011111100 00 0000 11222334556
Q ss_pred EEeecccceecccc----ccc----------cc--------------ccchhhhhhcccccEEEEEecC--CeeEeeeCC
Q psy18231 348 VLLDFLGSTQIGDV----TPI----------SI--------------HNSCFQALKEARDSITSVHVSD--HEILTASLD 397 (540)
Q Consensus 348 ~~~~~~~~~~~~~~----~~~----------~~--------------~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~d 397 (540)
.+|+.......... ... .. .......+.+|...+.+++|+| +.+++|+.|
T Consensus 377 ~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~D 456 (902)
T 2oaj_A 377 ETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSN 456 (902)
T ss_dssp EEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETT
T ss_pred EEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCC
Confidence 66654221100000 000 00 0011123456666677777888 789999999
Q ss_pred CeEEEEeCCCCceE----Ee---------eeCCceEEEEEecCCcEEEeecCCCeEEEEeccccc---------------
Q psy18231 398 CRIRRYDIRTGNLV----TD---------YVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGE--------------- 449 (540)
Q Consensus 398 g~i~iwd~~~~~~~----~~---------~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~--------------- 449 (540)
++|++||+.++... .. -+...|.+++|+|++++||+|+.||+|+|||+.+++
T Consensus 457 gtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~ 536 (902)
T 2oaj_A 457 GSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEM 536 (902)
T ss_dssp SEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--------------
T ss_pred CcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccce
Confidence 99999999887431 11 123579999999999999999999999999998763
Q ss_pred ------------------------------hhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEE
Q psy18231 450 ------------------------------LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 450 ------------------------------~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 499 (540)
++..+.+|.+.|+++ +||||| +||+|+.|++|++||++++..+....
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~sv--afSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~ 613 (902)
T 2oaj_A 537 NFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAI--NNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMEN 613 (902)
T ss_dssp -CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEE--EECBTS-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEE--EecCCc-EEEEEeCCCcEEEEECCCCeEEEEee
Confidence 356678899999988 899999 99999999999999988776654322
Q ss_pred e----cccceeeeEEEEc-----CCC---cEEEeec-CCeeEEEEc
Q psy18231 500 H----SVGKAVVNSLCSH-----PTR---KHIMSAC-GNNVKLWTA 532 (540)
Q Consensus 500 ~----~~~~~~v~~l~~s-----~d~---~~l~s~~-d~~i~iw~~ 532 (540)
. .+|.+.|++++|+ ||| ++|++++ |++|++|++
T Consensus 614 ~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 614 IREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp GGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred hhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 1 1788999999999 885 8999999 999999998
No 28
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.9e-42 Score=352.83 Aligned_cols=375 Identities=12% Similarity=0.112 Sum_probs=278.0
Q ss_pred ceeeeecccccc-eeeeeecCeEEEEeCCCCC-EEEEeeCCCcEEEEcCCCCeeEEEeecCCc---ceeEEEEeeC-CCe
Q psy18231 147 WSIRVYRPLTVN-RELFVLSGLMHTRFPVDGS-YCLTCGSDKKIKLWNPYRNLLLKTYGGHAH---EVNDATAACD-SSQ 220 (540)
Q Consensus 147 ~~i~~~~~~~~~-~~~~h~~~v~~v~~spdg~-~lat~~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~sp~-~~~ 220 (540)
..|++|+..... ....|.+.|.+++|+|+++ +|++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++
T Consensus 142 ~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 221 (615)
T 1pgu_A 142 GVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEF 221 (615)
T ss_dssp EEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCE
T ss_pred cEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCE
Confidence 689999954432 3356999999999999998 799999999999999999999999999999 9999999999 999
Q ss_pred EEEeeCCCeEEEEEcCCCceeEec-c---ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhh
Q psy18231 221 IASGASDKSVILWEVTTGQPVRRW-R---EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKE 296 (540)
Q Consensus 221 l~s~s~dg~i~iwd~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 296 (540)
|++++.||.|++||+.+++.+..+ . .|...|.+++|+ ++++|++++.||.|++||+++++......... ..
T Consensus 222 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----~~ 296 (615)
T 1pgu_A 222 VITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDK----QQ 296 (615)
T ss_dssp EEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCT----TC
T ss_pred EEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC----Cc
Confidence 999999999999999999999998 6 899999999999 99999999999999999998765311110000 00
Q ss_pred cCCceeEE--------------------------------------EEeecccccccccCceeeEEEeeee----ccccc
Q psy18231 297 ARDSITSV--------------------------------------HSLVKSTKNHLSNGLLTKLVFAFRC----KYLNG 334 (540)
Q Consensus 297 ~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 334 (540)
.......+ ..+.+ +. +..+.....+..|+. .....
T Consensus 297 ~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--l~~~~~dg~i~~w~~~~~~~~~~~ 373 (615)
T 1pgu_A 297 LGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP--LISGSYDGRIMEWSSSSMHQDHSN 373 (615)
T ss_dssp GGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT--TEEEETTSCEEETTTTEEECCCCS
T ss_pred ccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC--cEEECCCCeEEEEEchhhcCcccC
Confidence 00000000 00111 00 111111111111110 01111
Q ss_pred ceeeeeeccceeEEEeecccceeccccccccc------------------------------ccchhhhhhcccccEEEE
Q psy18231 335 LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI------------------------------HNSCFQALKEARDSITSV 384 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~v~~l 384 (540)
.+..+....+..+......+...+|++..... ....+..+ .+...+.++
T Consensus 374 ~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 452 (615)
T 1pgu_A 374 LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSV-RLNSPGSAV 452 (615)
T ss_dssp CEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEE
T ss_pred ceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeec-ccCCCceEE
Confidence 12222222222333333333333333322110 11111112 367889999
Q ss_pred EecCCeeEeeeC-CCeEEEEeCCCCceE-Eeee--CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhcc-CcC
Q psy18231 385 HVSDHEILTASL-DCRIRRYDIRTGNLV-TDYV--GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG-HKS 459 (540)
Q Consensus 385 ~~~~~~l~~~~~-dg~i~iwd~~~~~~~-~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~ 459 (540)
+++.+++++++. |+.|++||+.+++.. ..+. ...|.+++|+|++++|++++.||.|++||+.+++.+..+.+ |..
T Consensus 453 ~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~ 532 (615)
T 1pgu_A 453 SLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTS 532 (615)
T ss_dssp EECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSS
T ss_pred EEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCC
Confidence 999999999999 999999999987765 3443 35899999999999999999999999999999999999988 999
Q ss_pred CcceEEEEecC----------CCCeEEEeeCCCcEEEEEecCC-cceeEEEecccceeeeEEEEcCCCcEEEeec-CCee
Q psy18231 460 GDFRIECCLDS----------KDSQIFCGSSDGKIYKWQLVDS-SQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNV 527 (540)
Q Consensus 460 ~v~~~~~~~s~----------~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i 527 (540)
.+..+ +|+| ++++|++++.||.|++||+.++ +++..+. +|...|++++|+|+++ |++++ |+.|
T Consensus 533 ~v~~~--~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~h~~~v~~l~~s~~~~-l~s~~~d~~v 607 (615)
T 1pgu_A 533 KINAI--SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN--AHKDGVNNLLWETPST-LVSSGADACI 607 (615)
T ss_dssp CEEEE--EECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT--SSTTCEEEEEEEETTE-EEEEETTSCE
T ss_pred ceeEE--EEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh--cCccceEEEEEcCCCC-eEEecCCceE
Confidence 99888 8999 9999999999999999999998 6777776 8999999999999999 99999 9999
Q ss_pred EEEEcccc
Q psy18231 528 KLWTAEED 535 (540)
Q Consensus 528 ~iw~~~~~ 535 (540)
++|+++.+
T Consensus 608 ~iw~~~~~ 615 (615)
T 1pgu_A 608 KRWNVVLE 615 (615)
T ss_dssp EEEEEC--
T ss_pred EEEeeecC
Confidence 99999753
No 29
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6e-42 Score=324.92 Aligned_cols=267 Identities=19% Similarity=0.325 Sum_probs=238.2
Q ss_pred ceeccccchhhhhhcccccceeeeecccccce---eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCC----eeEE
Q psy18231 128 LLFSLPRTITRILYELPKEWSIRVYRPLTVNR---ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRN----LLLK 200 (540)
Q Consensus 128 ~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~----~~~~ 200 (540)
+.|+++ ...+++++.|++|++|+..+... ...|...|.+++|+|++++|++|+.|+.|++||+.++ ....
T Consensus 61 ~~~s~d---~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~ 137 (340)
T 1got_B 61 MHWGTD---SRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137 (340)
T ss_dssp EEECTT---SSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEE
T ss_pred EEECCC---CCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEE
Confidence 444544 34667889999999999877543 3458889999999999999999999999999998765 4567
Q ss_pred EeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCC
Q psy18231 201 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280 (540)
Q Consensus 201 ~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 280 (540)
.+.+|.+.|.++.|++++. +++++.|++|++||+++++.+..+.+|.+.|.+++|+|+++++++|+.||+|++||++++
T Consensus 138 ~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~ 216 (340)
T 1got_B 138 ELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216 (340)
T ss_dssp EEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 7889999999999998875 899999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccc
Q psy18231 281 SHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGD 360 (540)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (540)
..
T Consensus 217 ~~------------------------------------------------------------------------------ 218 (340)
T 1got_B 217 MC------------------------------------------------------------------------------ 218 (340)
T ss_dssp SE------------------------------------------------------------------------------
T ss_pred ee------------------------------------------------------------------------------
Confidence 51
Q ss_pred ccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC----CceEEEEEecCCcEEEee
Q psy18231 361 VTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG----EPIVDACFTRDCQCILTC 434 (540)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~i~~~~~sp~~~~l~~~ 434 (540)
...+.+|...|.+++|+| +.+++++.||.|++||+++++.+..+.. ..|.+++|+|+|++|++|
T Consensus 219 ----------~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g 288 (340)
T 1got_B 219 ----------RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 288 (340)
T ss_dssp ----------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred ----------EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEE
Confidence 114567889999999998 8899999999999999999988777653 369999999999999999
Q ss_pred cCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEE
Q psy18231 435 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488 (540)
Q Consensus 435 ~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd 488 (540)
+.|+.|++||+.+++.+..+.+|...|.++ +|+|+|.+|++|+.||+|++||
T Consensus 289 ~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~--~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 289 YDDFNCNVWDALKADRAGVLAGHDNRVSCL--GVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEE--EECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCeEEEEEcccCcEeeEeecCCCcEEEE--EEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999888 8999999999999999999996
No 30
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.6e-41 Score=353.46 Aligned_cols=286 Identities=21% Similarity=0.337 Sum_probs=243.9
Q ss_pred eeeeecCeEEEEeCCCC-CEEEEeeCCCcEEEEcCCCC-----eeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEE
Q psy18231 160 ELFVLSGLMHTRFPVDG-SYCLTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILW 233 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg-~~lat~~~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iw 233 (540)
..+|.+.|++++|+|++ ++|++|+.|++|++||+.+. .....+.+|...|.+++|+|++++|++|+.||+|+||
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 45799999999999864 79999999999999998753 4567889999999999999999999999999999999
Q ss_pred EcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccc
Q psy18231 234 EVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKN 313 (540)
Q Consensus 234 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
|+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.......
T Consensus 458 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~----------------------------- 508 (694)
T 3dm0_A 458 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT----------------------------- 508 (694)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-----------------------------
T ss_pred ECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee-----------------------------
Confidence 999999999999999999999999999999999999999999975432100
Q ss_pred ccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC----C
Q psy18231 314 HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD----H 389 (540)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~ 389 (540)
......+|...|.+++|+| .
T Consensus 509 --------------------------------------------------------~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 509 --------------------------------------------------------ISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp --------------------------------------------------------ECSSTTSCSSCEEEEEECSCSSSC
T ss_pred --------------------------------------------------------eccCCCCCCCcEEEEEEeCCCCcc
Confidence 0012346888999999998 3
Q ss_pred eeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEE
Q psy18231 390 EILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC 467 (540)
Q Consensus 390 ~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 467 (540)
.+++++.|+.|++||+++++....+.+ ..|++++|+|++++|++++.||.|++||+.+++.+..+..+ ..+..+ +
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~--~ 609 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHAL--C 609 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEE--E
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcEEEE--E
Confidence 699999999999999999998888865 57999999999999999999999999999999988877654 456665 8
Q ss_pred ecCCCCeEEEeeCCCcEEEEEecCCcceeEEEec-----------------ccceeeeEEEEcCCCcEEEeec-CCeeEE
Q psy18231 468 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS-----------------VGKAVVNSLCSHPTRKHIMSAC-GNNVKL 529 (540)
Q Consensus 468 ~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------------~~~~~v~~l~~s~d~~~l~s~~-d~~i~i 529 (540)
|+|++.+|++++ |+.|++||+.+++.+..+... .+...+++++|+|||++|++|+ ||+|++
T Consensus 610 ~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~i 688 (694)
T 3dm0_A 610 FSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRV 688 (694)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEE
Confidence 999988877765 566999999999887766411 0112378999999999999999 999999
Q ss_pred EEccc
Q psy18231 530 WTAEE 534 (540)
Q Consensus 530 w~~~~ 534 (540)
|++..
T Consensus 689 W~i~~ 693 (694)
T 3dm0_A 689 WGIGR 693 (694)
T ss_dssp EEC--
T ss_pred EeccC
Confidence 99853
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-41 Score=317.98 Aligned_cols=249 Identities=18% Similarity=0.229 Sum_probs=221.2
Q ss_pred eeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEE
Q psy18231 197 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276 (540)
Q Consensus 197 ~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 276 (540)
+..+++.+|.+.|++++|+|++++|++++.||+|++||+++++.+..+..|..+|.+++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccce
Q psy18231 277 VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
+.+++.
T Consensus 84 ~~~~~~-------------------------------------------------------------------------- 89 (304)
T 2ynn_A 84 YNTGEK-------------------------------------------------------------------------- 89 (304)
T ss_dssp TTTCCE--------------------------------------------------------------------------
T ss_pred CCCCcE--------------------------------------------------------------------------
Confidence 987751
Q ss_pred ecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCce-EEeeeC--CceEEEEEec-CCcE
Q psy18231 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNL-VTDYVG--EPIVDACFTR-DCQC 430 (540)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~-~~~~~~--~~i~~~~~sp-~~~~ 430 (540)
+..+.+|...|.+++|+| .++++++.|++|++||++++.. ...+.+ ..|.+++|+| ++.+
T Consensus 90 --------------~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 90 --------------VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp --------------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred --------------EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 125567999999999999 7899999999999999998744 445544 5799999999 6789
Q ss_pred EEeecCCCeEEEEeccccchhhhhc-cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeE
Q psy18231 431 ILTCSTDECLRLFDKATGELLEEYK-GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNS 509 (540)
Q Consensus 431 l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 509 (540)
|++|+.|++|++||+.++.....+. +|...+..+.+...+++.+|++|+.|++|++||+++++++..+. +|...|.+
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~--~h~~~v~~ 233 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE--GHMSNVSF 233 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE--CCSSCEEE
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC--CCCCCEEE
Confidence 9999999999999998877665554 45566777744445688899999999999999999999999998 99999999
Q ss_pred EEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 510 LCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 510 l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
++|+|++++|++++ ||+|++||+.++
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999999999 999999998764
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-41 Score=328.12 Aligned_cols=284 Identities=12% Similarity=0.164 Sum_probs=240.9
Q ss_pred eeeeeecCeEEEEeCCCC-CEEEEeeCCCcEEEEcCCCCeeEEEee--cCCcceeEEEEee-CCCeEEEeeCCCeEEEEE
Q psy18231 159 RELFVLSGLMHTRFPVDG-SYCLTCGSDKKIKLWNPYRNLLLKTYG--GHAHEVNDATAAC-DSSQIASGASDKSVILWE 234 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg-~~lat~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~sp-~~~~l~s~s~dg~i~iwd 234 (540)
...+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 345789999999999999 999999999999999999888777765 6999999999999 789999999999999999
Q ss_pred cCCCceeEeccc---cCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccc
Q psy18231 235 VTTGQPVRRWRE---HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKST 311 (540)
Q Consensus 235 ~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (540)
++. +.+..+.. |...|.+++|+|++++|++++.||.|++||++ ++ .
T Consensus 148 ~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~--~--------------------------- 196 (383)
T 3ei3_B 148 FSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH--E--------------------------- 196 (383)
T ss_dssp TTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC--E---------------------------
T ss_pred CCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC--E---------------------------
Confidence 985 55555543 45889999999999999999999999999984 22 1
Q ss_pred ccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--C
Q psy18231 312 KNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--H 389 (540)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~ 389 (540)
+..+..|...|.+++|+| .
T Consensus 197 -----------------------------------------------------------~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 197 -----------------------------------------------------------IFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp -----------------------------------------------------------EEEEECSSSCEEEEEECSSCT
T ss_pred -----------------------------------------------------------EEEeccCCCcEEEEEECCCCC
Confidence 114557889999999999 4
Q ss_pred -eeEeeeCCCeEEEEeCCC----CceEEeee-CCceEEEEEec-CCcEEEeecCCCeEEEEeccccchhhhhccCcCC--
Q psy18231 390 -EILTASLDCRIRRYDIRT----GNLVTDYV-GEPIVDACFTR-DCQCILTCSTDECLRLFDKATGELLEEYKGHKSG-- 460 (540)
Q Consensus 390 -~l~~~~~dg~i~iwd~~~----~~~~~~~~-~~~i~~~~~sp-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-- 460 (540)
++++++.|+.|++||+++ +..+..+. ...|.+++|+| ++++|++++.|+.|++||+++++.+..+..|...
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 899999999999999997 55665554 46899999999 9999999999999999999999887777765421
Q ss_pred -----cc--------eEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeecCCee
Q psy18231 461 -----DF--------RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNV 527 (540)
Q Consensus 461 -----v~--------~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i 527 (540)
+. .+.++++|++++ +|+.||.|++||+.+++.+..+....|...+..++|+|++++|++++|+.|
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i 375 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNI 375 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEETTEE
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEecCCcE
Confidence 11 122367777777 888999999999999999999984346788888999999999999999999
Q ss_pred EEEEccc
Q psy18231 528 KLWTAEE 534 (540)
Q Consensus 528 ~iw~~~~ 534 (540)
++|++++
T Consensus 376 ~iw~~~~ 382 (383)
T 3ei3_B 376 LIWNRED 382 (383)
T ss_dssp EEEECC-
T ss_pred EEEecCC
Confidence 9999975
No 33
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.7e-41 Score=329.91 Aligned_cols=296 Identities=12% Similarity=0.170 Sum_probs=252.8
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe------eEEEeecCCcceeEEEEeeC----C---CeEEEeeC
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL------LLKTYGGHAHEVNDATAACD----S---SQIASGAS 226 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~------~~~~~~~h~~~v~~l~~sp~----~---~~l~s~s~ 226 (540)
..+|.+.|++++|+| ++|++|+.||+|++||+.+++ .+..+.+|...|++++|+|+ + ++|++++.
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 447999999999999 799999999999999999887 78889999999999999999 9 99999999
Q ss_pred CCeEEEEEcCCCce-----eEecccc-----CCceeEEEEC----CCCCE-EEEecCCCcEEEEEecC------CCCCCc
Q psy18231 227 DKSVILWEVTTGQP-----VRRWREH-----ASKVTCVKFN----EDSSV-VISGSQDNTVMMWDVKS------RSHHPI 285 (540)
Q Consensus 227 dg~i~iwd~~~~~~-----~~~~~~h-----~~~v~~~~~~----~~~~~-l~s~~~dg~i~iwd~~~------~~~~~~ 285 (540)
||.|++||+.+++. +..+..| ...|.+++|+ |++++ |++++.||.|++||+++ .+....
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeec
Confidence 99999999999887 8888888 5999999999 99999 99999999999999987 321000
Q ss_pred chhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccc
Q psy18231 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS 365 (540)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (540)
. ....+..
T Consensus 170 ~--------------------------------------------------------~~~~~~~---------------- 177 (397)
T 1sq9_A 170 S--------------------------------------------------------PTLELQG---------------- 177 (397)
T ss_dssp C--------------------------------------------------------CEEEEEE----------------
T ss_pred c--------------------------------------------------------Ccceeee----------------
Confidence 0 0000000
Q ss_pred cccchhhhhhcccccEEEEEecC-CeeEeeeCCCeEEEEeCCCCceEEeeeC--------CceEEEEEecCCcEEEeecC
Q psy18231 366 IHNSCFQALKEARDSITSVHVSD-HEILTASLDCRIRRYDIRTGNLVTDYVG--------EPIVDACFTRDCQCILTCST 436 (540)
Q Consensus 366 ~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------~~i~~~~~sp~~~~l~~~~~ 436 (540)
.......|...|.+++|+| ..+++++.||.|++||+++++.+..+.. ..|.+++|+|++++|++++.
T Consensus 178 ----~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~ 253 (397)
T 1sq9_A 178 ----TVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHD 253 (397)
T ss_dssp ----EECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEE
T ss_pred ----eeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEec
Confidence 0001245788899999998 5888999999999999999998887764 47999999999999999999
Q ss_pred C---CeEEEEeccccchhhhhcc-------------CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe
Q psy18231 437 D---ECLRLFDKATGELLEEYKG-------------HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 500 (540)
Q Consensus 437 d---g~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 500 (540)
| +.|++||+++++.+..+.. |...+..+ +|+|++++|++++.||.|++||+.+++.+..+..
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 331 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL--SFNDSGETLCSAGWDGKLRFWDVKTKERITTLNM 331 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEE--EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEE--EECCCCCEEEEEeCCCeEEEEEcCCCceeEEEec
Confidence 9 9999999999999999988 88888887 8999999999999999999999999999888872
Q ss_pred c----cc---------------ceeeeEEEEcCCC----------cEEEeec-CCeeEEEEcccc
Q psy18231 501 S----VG---------------KAVVNSLCSHPTR----------KHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 501 ~----~~---------------~~~v~~l~~s~d~----------~~l~s~~-d~~i~iw~~~~~ 535 (540)
. .| ...|++++|+|++ ++|++++ ||.|++|+++++
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 332 HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 1 34 8999999999998 7999999 999999999875
No 34
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.6e-42 Score=336.18 Aligned_cols=287 Identities=15% Similarity=0.168 Sum_probs=232.7
Q ss_pred eeeeecCeEEEEeCC-CCCEEEEeeCCCcEEEEcCCCCee--EEEeecCCcceeEEEEee-CCCeEEEeeCCCeEEEEEc
Q psy18231 160 ELFVLSGLMHTRFPV-DGSYCLTCGSDKKIKLWNPYRNLL--LKTYGGHAHEVNDATAAC-DSSQIASGASDKSVILWEV 235 (540)
Q Consensus 160 ~~~h~~~v~~v~~sp-dg~~lat~~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg~i~iwd~ 235 (540)
...|...|+|++|+| ++++||+|+.||+|+|||+.+++. ...+.+|.+.|++++|+| ++++|++++.||+|++||+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 456889999999999 577999999999999999987654 444568999999999998 7899999999999999999
Q ss_pred CCCceeEecc--ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccc
Q psy18231 236 TTGQPVRRWR--EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKN 313 (540)
Q Consensus 236 ~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
+++....... .+...+.+++|+|++++|++|+.||.|++||++...
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-------------------------------- 242 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-------------------------------- 242 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB--------------------------------
T ss_pred cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce--------------------------------
Confidence 7765433332 334567899999999999999999999999986532
Q ss_pred ccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---Ce
Q psy18231 314 HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HE 390 (540)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~ 390 (540)
+..+.+|...|.+++|+| .+
T Consensus 243 ---------------------------------------------------------~~~~~~h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 243 ---------------------------------------------------------LWNLRMHKKKVTHVALNPCCDWF 265 (435)
T ss_dssp ---------------------------------------------------------CCCSBCCSSCEEEEEECTTCSSE
T ss_pred ---------------------------------------------------------eEEEecccceEEeeeecCCCceE
Confidence 114567899999999998 47
Q ss_pred eEeeeCCCeEEEEeCCCCceEEee-----eCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCC----c
Q psy18231 391 ILTASLDCRIRRYDIRTGNLVTDY-----VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG----D 461 (540)
Q Consensus 391 l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----v 461 (540)
+++++.|+.|++||+++.+....+ +...|++++|+|+|++|++++.||.|++||+.+++....+..|... +
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 345 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHL 345 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSS
T ss_pred EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccc
Confidence 889999999999999987654333 2368999999999999999999999999999998877766655432 2
Q ss_pred ceEEEEecCCCCeEEEee------------CCCcEEEEEecCCcceeEEEecccceeeeEE-EEcCCCcEEEeecCCeeE
Q psy18231 462 FRIECCLDSKDSQIFCGS------------SDGKIYKWQLVDSSQISTLIHSVGKAVVNSL-CSHPTRKHIMSACGNNVK 528 (540)
Q Consensus 462 ~~~~~~~s~~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l-~~s~d~~~l~s~~d~~i~ 528 (540)
..+...|+|++.++++++ .++.|++||..+++.+..+.. +|...|.++ +|+|+|++|++|+|++|+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~-~~~~~v~s~~~fspdg~~lasg~d~~i~ 424 (435)
T 4e54_B 346 TPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD-PESSGISSLNEFNPMGDTLASAMGYHIL 424 (435)
T ss_dssp CCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC-SSCCCCCCEEEECTTSSCEEEECSSEEE
T ss_pred eeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC-CCCCcEEEEEEECCCCCEEEEEcCCcEE
Confidence 233336677776666654 346799999999999888753 678888887 699999999998888999
Q ss_pred EEEccccc
Q psy18231 529 LWTAEEDY 536 (540)
Q Consensus 529 iw~~~~~~ 536 (540)
||+++++-
T Consensus 425 iW~~~~gk 432 (435)
T 4e54_B 425 IWSQQEAR 432 (435)
T ss_dssp ECCCC---
T ss_pred EEECCcCe
Confidence 99998763
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.2e-41 Score=331.61 Aligned_cols=336 Identities=13% Similarity=0.122 Sum_probs=262.3
Q ss_pred cceeccccchhhhhhcccccceeeeeccccccee--eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeec
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRPLTVNRE--LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGG 204 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~ 204 (540)
.+.|+++ ...++.++.++.+++|+..+.... ......+....|+|++++|++|+.||.|++||+.+++....+.+
T Consensus 61 ~~~~s~~---g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 137 (420)
T 3vl1_A 61 GNTFEKV---GSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA 137 (420)
T ss_dssp TCEEEEE---ETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS
T ss_pred ceeeeec---CCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc
Confidence 4566666 345667788999999998765421 11224455567899999999999999999999999999988889
Q ss_pred CCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCC
Q psy18231 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP 284 (540)
Q Consensus 205 h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 284 (540)
|...|++++|+|++++|++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.||+|++||+++++...
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998765211
Q ss_pred cchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccc
Q psy18231 285 IQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPI 364 (540)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (540)
.. .. .......+..+..... .
T Consensus 218 ~~--~~---~~~~~~~v~~~~~~~~--------------------------------------------~---------- 238 (420)
T 3vl1_A 218 TF--NR---KENPHDGVNSIALFVG--------------------------------------------T---------- 238 (420)
T ss_dssp EE--CB---TTBTTCCEEEEEEEEC--------------------------------------------C----------
T ss_pred Ee--ec---CCCCCCCccEEEEecC--------------------------------------------C----------
Confidence 10 00 0000000000000000 0
Q ss_pred ccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC---CceEEEEEecCCc-EEEeecCCC
Q psy18231 365 SIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG---EPIVDACFTRDCQ-CILTCSTDE 438 (540)
Q Consensus 365 ~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~i~~~~~sp~~~-~l~~~~~dg 438 (540)
.......+...+.+++|+| +++++++.||.|++||+++++.+..+.. ..+.+++|+|+++ +|++++.||
T Consensus 239 -----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg 313 (420)
T 3vl1_A 239 -----DRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG 313 (420)
T ss_dssp -----CSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS
T ss_pred -----cceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC
Confidence 0002234567788888988 7899999999999999999988777753 5799999999999 999999999
Q ss_pred eEEEEeccccch-hhhhcc-CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc---------eeEEEecccceee
Q psy18231 439 CLRLFDKATGEL-LEEYKG-HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ---------ISTLIHSVGKAVV 507 (540)
Q Consensus 439 ~i~i~d~~~~~~-~~~~~~-~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~---------~~~~~~~~~~~~v 507 (540)
.|++||+++++. +..+.. |...+..+ +++++++|++++.||.|++||+.+.+. ...+. .|...|
T Consensus 314 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~v 388 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLINEGTPINNV---YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLV--SNDDAV 388 (420)
T ss_dssp EEEEEETTCTTSCSEEEEESTTSCEEEE---EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEEC--CSSCCC
T ss_pred eEEEEEcCCCcCchhhhhccCCCCceEE---EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEc--cCCcce
Confidence 999999998754 677777 45555544 456788999999999999999987422 22333 788899
Q ss_pred eEEEEcCCCc---EEEeec-CCeeEEEEccc
Q psy18231 508 NSLCSHPTRK---HIMSAC-GNNVKLWTAEE 534 (540)
Q Consensus 508 ~~l~~s~d~~---~l~s~~-d~~i~iw~~~~ 534 (540)
.+++|+|+++ .|++++ +|.+.+|++++
T Consensus 389 ~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 389 SQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 9999999999 455545 99999999875
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.1e-41 Score=324.10 Aligned_cols=287 Identities=13% Similarity=0.182 Sum_probs=247.5
Q ss_pred eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe--eEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL--LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 238 (540)
..|.++|++++|+|++++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||++++
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 3488999999999999999999999999999999987 88899999999999999999999999999999999999888
Q ss_pred ceeEe--ccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccc
Q psy18231 239 QPVRR--WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLS 316 (540)
Q Consensus 239 ~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (540)
+.... +..|...|.+++|+|++++|++++.||.|++||++........
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~------------------------------ 134 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC------------------------------ 134 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE------------------------------
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceee------------------------------
Confidence 75443 4679999999999999999999999999999999876520000
Q ss_pred cCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEee
Q psy18231 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTA 394 (540)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~ 394 (540)
......|...|.+++|+| ++++++
T Consensus 135 ------------------------------------------------------~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 135 ------------------------------------------------------KHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp ------------------------------------------------------EEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred ------------------------------------------------------eeeecccCCCeeEEEEcCCCCEEEEE
Confidence 002346788999999998 789999
Q ss_pred eCCCeEEEEeCC------------------CCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhh
Q psy18231 395 SLDCRIRRYDIR------------------TGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 454 (540)
Q Consensus 395 ~~dg~i~iwd~~------------------~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 454 (540)
+.||.|++||++ .++.+..+.. ..+.+++|+|++++|++++.|+.|++||+++++.+..+
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 999999999954 5677777754 57999999999999999999999999999999999999
Q ss_pred ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecC--Ccc--e-----------------------------------
Q psy18231 455 KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD--SSQ--I----------------------------------- 495 (540)
Q Consensus 455 ~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~--~~~--~----------------------------------- 495 (540)
..|...+..+ +|+|++++|++| .|+.|++|++.+ ++. +
T Consensus 241 ~~~~~~v~~~--~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (372)
T 1k8k_C 241 ASETLPLLAV--TFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA 317 (372)
T ss_dssp ECSSCCEEEE--EEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred ccCCCCeEEE--EEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence 9999888887 899999988888 899999999988 420 0
Q ss_pred -eEEEecccceeeeEEEEc-CCC---cEEEeec-CCeeEEEEcccc
Q psy18231 496 -STLIHSVGKAVVNSLCSH-PTR---KHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 496 -~~~~~~~~~~~v~~l~~s-~d~---~~l~s~~-d~~i~iw~~~~~ 535 (540)
..+. .+|...|++++|+ ++| ++|++++ ||.|++|+++++
T Consensus 318 ~~~~~-~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 318 GAGLD-SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp -CCCS-SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred ccccc-ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 1111 2799999999966 676 9999999 999999999764
No 37
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6e-41 Score=319.50 Aligned_cols=269 Identities=19% Similarity=0.307 Sum_probs=237.5
Q ss_pred cceeccccchhhhhhcccccceeeeecccccce---eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCC------e
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRPLTVNR---ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRN------L 197 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~------~ 197 (540)
.+.|+++ ...+++++.|++|++|+..+... ...|...|.+++|+|+|++|++|+.|+.+++|++... .
T Consensus 69 ~~~~s~d---~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~ 145 (354)
T 2pbi_B 69 CMDWCKD---KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAA 145 (354)
T ss_dssp EEEECTT---SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGG
T ss_pred EEEECCC---CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccc
Confidence 3445544 35677889999999999876543 3347788999999999999999999999999997643 3
Q ss_pred eEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECC--CCCEEEEecCCCcEEEE
Q psy18231 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE--DSSVVISGSQDNTVMMW 275 (540)
Q Consensus 198 ~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iw 275 (540)
....+.+|...|.+++|+|++..|++++.|++|++||+++++.+..+.+|...|.+++|+| ++++|++|+.||+|++|
T Consensus 146 ~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 146 KKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp GCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred cceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 4567788999999999999999999999999999999999999999999999999999988 56899999999999999
Q ss_pred EecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccc
Q psy18231 276 DVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGS 355 (540)
Q Consensus 276 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (540)
|+++++.
T Consensus 226 d~~~~~~------------------------------------------------------------------------- 232 (354)
T 2pbi_B 226 DMRSGQC------------------------------------------------------------------------- 232 (354)
T ss_dssp ETTTCCE-------------------------------------------------------------------------
T ss_pred ECCCCcE-------------------------------------------------------------------------
Confidence 9987651
Q ss_pred eecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC----CceEEEEEecCCc
Q psy18231 356 TQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG----EPIVDACFTRDCQ 429 (540)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~i~~~~~sp~~~ 429 (540)
...+..|...|.+++|+| +.+++++.|++|++||+++++.+..+.. ..+.+++|+|+++
T Consensus 233 ---------------~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 297 (354)
T 2pbi_B 233 ---------------VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR 297 (354)
T ss_dssp ---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred ---------------EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC
Confidence 124567889999999998 8899999999999999999887766653 3689999999999
Q ss_pred EEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEE
Q psy18231 430 CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488 (540)
Q Consensus 430 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd 488 (540)
+|++|+.|+.|++||+.+++.+..+.+|...|.++ +|+|+|++|++|+.||+|++|+
T Consensus 298 ~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l--~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 298 LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTL--RVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE--EECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEEECCCcEEEEECCCCceEEEEECCCCcEEEE--EECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999999999999888 8999999999999999999996
No 38
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.7e-41 Score=321.69 Aligned_cols=287 Identities=14% Similarity=0.219 Sum_probs=240.0
Q ss_pred eeeecCeEEEEeCCCCCEE-EEeeC---CCcEEEEcCCCCeeEEEe-ecCCcceeEEEEeeC---CCeEEEeeCCCeEEE
Q psy18231 161 LFVLSGLMHTRFPVDGSYC-LTCGS---DKKIKLWNPYRNLLLKTY-GGHAHEVNDATAACD---SSQIASGASDKSVIL 232 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~l-at~~~---dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~sp~---~~~l~s~s~dg~i~i 232 (540)
.+|.+.|.+++|+|+++.+ ++|+. ||.|++||+.+++..... .+|...|.+++|+|+ +++|++++.||.|++
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 94 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHI 94 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEE
Confidence 4699999999999999655 56665 899999999988765443 369999999999998 699999999999999
Q ss_pred EEcCCCc-eeEeccccCCceeEEEE------CCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEE
Q psy18231 233 WEVTTGQ-PVRRWREHASKVTCVKF------NEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305 (540)
Q Consensus 233 wd~~~~~-~~~~~~~h~~~v~~~~~------~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (540)
||+.+++ .+..+.+|...|.++.| +|++++|++++.||.|++||+++++.....
T Consensus 95 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~------------------- 155 (357)
T 3i2n_A 95 WNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVAN------------------- 155 (357)
T ss_dssp ECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEE-------------------
T ss_pred EeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCccee-------------------
Confidence 9999988 88889999999999954 688999999999999999999876520000
Q ss_pred EeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhh-cccccEEEE
Q psy18231 306 SLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALK-EARDSITSV 384 (540)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l 384 (540)
+.... .+...+.++
T Consensus 156 -----------------------------------------------------------------~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 156 -----------------------------------------------------------------MEPVQGENKRDCWTV 170 (357)
T ss_dssp -----------------------------------------------------------------ECCCTTSCCCCEEEE
T ss_pred -----------------------------------------------------------------ccccCCCCCCceEEE
Confidence 00001 113467777
Q ss_pred E----ecC--CeeEeeeCCCeEEEEeCCCCceEEeee-CCceEEEEEec---CCcEEEeecCCCeEEEEeccccchhhhh
Q psy18231 385 H----VSD--HEILTASLDCRIRRYDIRTGNLVTDYV-GEPIVDACFTR---DCQCILTCSTDECLRLFDKATGELLEEY 454 (540)
Q Consensus 385 ~----~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~i~~~~~sp---~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 454 (540)
+ |++ ..+++++.||.|++||+++++...... ...+.+++|+| ++++|++++.||.|++||+++++.+..+
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 7 555 889999999999999999998765554 47899999999 9999999999999999999999888777
Q ss_pred c-----cCcCCcceEEEEecCCCC-eEEEeeCCCcEEEEEecCCc-------------------ceeEEEecccceeeeE
Q psy18231 455 K-----GHKSGDFRIECCLDSKDS-QIFCGSSDGKIYKWQLVDSS-------------------QISTLIHSVGKAVVNS 509 (540)
Q Consensus 455 ~-----~~~~~v~~~~~~~s~~~~-~l~s~s~dg~i~iwd~~~~~-------------------~~~~~~~~~~~~~v~~ 509 (540)
. +|...+..+ +|+|+++ +|++++.||.|++||+.++. .+..+. .|...|++
T Consensus 251 ~~~~~~~~~~~v~~~--~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~v~~ 326 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQV--RHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT--LSTQPISS 326 (357)
T ss_dssp EEEEEECCSSCEEEE--EEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE--CCSSCEEE
T ss_pred eeeccCCCcCCEEEE--EECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc--cCCCCeeE
Confidence 6 899988888 8999998 89999999999999998653 445555 89999999
Q ss_pred EEEcCCCcEEE-eec-CCeeEEEEcccc
Q psy18231 510 LCSHPTRKHIM-SAC-GNNVKLWTAEED 535 (540)
Q Consensus 510 l~~s~d~~~l~-s~~-d~~i~iw~~~~~ 535 (540)
++|+|++++|+ +++ |+.|++|++.+.
T Consensus 327 ~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 327 LDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 99999999998 788 999999999764
No 39
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.7e-41 Score=313.48 Aligned_cols=264 Identities=17% Similarity=0.314 Sum_probs=228.9
Q ss_pred hhhhhcccccceeeeeccccc--------ceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcc
Q psy18231 137 TRILYELPKEWSIRVYRPLTV--------NRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE 208 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~--------~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~ 208 (540)
..++++++.|++|++|+.... ....+|...|.+++|+|+|++|++|+.|++|++||+.+++.+..+.+|...
T Consensus 30 ~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~ 109 (319)
T 3frx_A 30 PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD 109 (319)
T ss_dssp TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc
Confidence 467788999999999987542 123569999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCC------CCEEEEecCCCcEEEEEecCCCC
Q psy18231 209 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED------SSVVISGSQDNTVMMWDVKSRSH 282 (540)
Q Consensus 209 v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~~~~~ 282 (540)
|.+++|+|++++|++++.|++|++||++ ++.+..+.+|...|.++.|+|. +..+++++.|+.|++||+++.+.
T Consensus 110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 188 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188 (319)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh
Confidence 9999999999999999999999999995 5677788899999999999984 44899999999999999976541
Q ss_pred CCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccc
Q psy18231 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVT 362 (540)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (540)
T Consensus 189 -------------------------------------------------------------------------------- 188 (319)
T 3frx_A 189 -------------------------------------------------------------------------------- 188 (319)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEeecCCCe
Q psy18231 363 PISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTCSTDEC 439 (540)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~dg~ 439 (540)
...+.+|...|.+++|+| .+|++++.||.|++||+.+++.+..+.. ..+.+++|+|++.+|++++.+ .
T Consensus 189 --------~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~ 259 (319)
T 3frx_A 189 --------EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-G 259 (319)
T ss_dssp --------EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-E
T ss_pred --------heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-C
Confidence 114557899999999999 7899999999999999999999888875 689999999999999988765 5
Q ss_pred EEEEeccccchhhhhc--------cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCC
Q psy18231 440 LRLFDKATGELLEEYK--------GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS 492 (540)
Q Consensus 440 i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~ 492 (540)
+++|++..+..+..+. .|...+..+ +|+|||++|++|+.||.|++||+.++
T Consensus 260 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 260 IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSL--AWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEE--EECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cEEEEeCcCeeeeccCccccccccCcCcceeEE--EECCCCCEEEEeecCceEEEEEEeec
Confidence 9999998776554443 234445555 99999999999999999999998764
No 40
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.7e-41 Score=322.13 Aligned_cols=275 Identities=15% Similarity=0.239 Sum_probs=221.0
Q ss_pred cceeccccchhhhhhcccc------cceeeeecccccc-------eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcC
Q psy18231 127 PLLFSLPRTITRILYELPK------EWSIRVYRPLTVN-------RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNP 193 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~------~~~i~~~~~~~~~-------~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~ 193 (540)
.+.|+++. ..+++++. ++.+++|+..+.. ....|...|.+++|+|++++ ++++.||+|+|||+
T Consensus 47 ~v~fSpDG---~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~ 122 (357)
T 4g56_B 47 AVRYRRDG---ALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEI 122 (357)
T ss_dssp EEEECSSS---CEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC--
T ss_pred EEEECCCC---CEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeec
Confidence 45566663 33444444 5678888875532 33568899999999999865 46778999999999
Q ss_pred CCCeeEE----EeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCC-EEEEecC
Q psy18231 194 YRNLLLK----TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS-VVISGSQ 268 (540)
Q Consensus 194 ~~~~~~~----~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~ 268 (540)
.+++... ...+|...|++++|+|++++|++++.|++|++||+++++.+..+++|...|.+++|++++. ++++++.
T Consensus 123 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~ 202 (357)
T 4g56_B 123 LEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGE 202 (357)
T ss_dssp ------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEET
T ss_pred cccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeecc
Confidence 8876543 3457999999999999999999999999999999999999999999999999999999874 7899999
Q ss_pred CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEE
Q psy18231 269 DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMV 348 (540)
Q Consensus 269 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (540)
||+|++||+++++.....
T Consensus 203 dg~v~~wd~~~~~~~~~~-------------------------------------------------------------- 220 (357)
T 4g56_B 203 DGRILLWDTRKPKPATRI-------------------------------------------------------------- 220 (357)
T ss_dssp TSCEEECCTTSSSCBCBC--------------------------------------------------------------
T ss_pred CCceEEEECCCCceeeee--------------------------------------------------------------
Confidence 999999999887631111
Q ss_pred EeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEE
Q psy18231 349 LLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDAC 423 (540)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~ 423 (540)
....+...+.+++|+| .++++|+.|+.|++||+++++.+..+.+ ..|++++
T Consensus 221 ------------------------~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~ 276 (357)
T 4g56_B 221 ------------------------DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLA 276 (357)
T ss_dssp ------------------------CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEE
T ss_pred ------------------------eeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEE
Confidence 2345677899999997 5788999999999999999998888865 5899999
Q ss_pred EecCC-cEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecC-CCCeEEEeeCCCcEEEEEecCCcc
Q psy18231 424 FTRDC-QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDS-KDSQIFCGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 424 ~sp~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~-~~~~l~s~s~dg~i~iwd~~~~~~ 494 (540)
|+|++ ++|++++.|++|+|||+++++.+..+ +|...|+++ +|+| ++++|++++.||+|++|++.+...
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~v--afsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGV--AWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEE--EECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEE--EEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 99987 57999999999999999999877655 799999888 8998 789999999999999999876443
No 41
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.7e-41 Score=372.67 Aligned_cols=395 Identities=19% Similarity=0.292 Sum_probs=295.3
Q ss_pred cceeccccchhhhhhcccccceeeeecccccce---eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEee
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRPLTVNR---ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG 203 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~ 203 (540)
.+.|+++ ...+++++.+++|++|+..+... ..+|.+.|.+++|+|+|++|++++.||+|++||+.+++.+..+.
T Consensus 620 ~~~~s~~---~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 620 HACFSQD---GQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp EEEECTT---SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCC---CCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 3455555 34567788999999999987653 34599999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEee--CCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCC
Q psy18231 204 GHAHEVNDATAAC--DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 204 ~h~~~v~~l~~sp--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 281 (540)
+|...|.+++|+| ++.++++++.|+.|++||+.+++.+..+.+|.+.|.+++|+|+++++++++.||+|++||+.+++
T Consensus 697 ~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 697 EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTE
T ss_pred CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCc
Confidence 9999999999999 56689999999999999999999999999999999999999999999999999999999998764
Q ss_pred CCCcchh-h----hhHhh------------------------------------------hhcCCceeEEEEeecccccc
Q psy18231 282 HHPIQVR-C----LNEAL------------------------------------------KEARDSITSVHSLVKSTKNH 314 (540)
Q Consensus 282 ~~~~~~~-~----~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~ 314 (540)
....... . ..... ..+...+. .+.+.+.+.
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~---~~~~sp~~~ 853 (1249)
T 3sfz_A 777 ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQ---YCDFSPYDH 853 (1249)
T ss_dssp EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCC---EEEECSSTT
T ss_pred ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceE---EEEEcCCCC
Confidence 2110000 0 00000 00000000 011111100
Q ss_pred -cccCceeeEEEeee---------ecccccceeee----------eeccceeEEEee-----------------------
Q psy18231 315 -LSNGLLTKLVFAFR---------CKYLNGLLSGV----------LMSTQHLMVLLD----------------------- 351 (540)
Q Consensus 315 -~~~~~~~~~~~~~~---------~~~~~~~~~~~----------~~~~~~~~~~~~----------------------- 351 (540)
+..+.....+..|+ .......+..+ ..+.++.+.+|+
T Consensus 854 ~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1249)
T 3sfz_A 854 LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQEN 933 (1249)
T ss_dssp EEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETT
T ss_pred EEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCC
Confidence 00000011111110 00111111111 111222233332
Q ss_pred -----------------------------------------------cccceecccccccccccchhhhhhcccccEEEE
Q psy18231 352 -----------------------------------------------FLGSTQIGDVTPISIHNSCFQALKEARDSITSV 384 (540)
Q Consensus 352 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 384 (540)
..+...+++... ......+.+|...|.++
T Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~----~~~~~~~~~h~~~v~~l 1009 (1249)
T 3sfz_A 934 ETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPN----NRVFSSGVGHKKAVRHI 1009 (1249)
T ss_dssp EEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTT----TSCEEECCCCSSCCCCE
T ss_pred CcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCC----CceeeecccCCCceEEE
Confidence 222222222221 22334566899999999
Q ss_pred EecC--CeeEeeeCCCeEEEEeCCCCceEEeee-CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCc
Q psy18231 385 HVSD--HEILTASLDCRIRRYDIRTGNLVTDYV-GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461 (540)
Q Consensus 385 ~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v 461 (540)
+|+| +.+++++.||.|++||+.+++...... ...+.+++|+|++. +++++.||.|++||+.+++.+..+.+|...+
T Consensus 1010 ~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v 1088 (1249)
T 3sfz_A 1010 QFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTV 1088 (1249)
T ss_dssp EECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSE-EEEEESSSEEEEEETTTTCCCEEEECCSSCC
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCc-EEEEECCCcEEEEECCCCceeEEEcccCCcE
Confidence 9998 789999999999999999988765443 36899999999765 6788899999999999999999999999999
Q ss_pred ceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEccccc
Q psy18231 462 FRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 462 ~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~~ 536 (540)
..+ +|+|++++|++++.||+|++||+.+++++..+. +|...|++++|+|++++|++++ ||.|++||+.++.
T Consensus 1089 ~~~--~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~--~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1089 LSC--AISSDATKFSSTSADKTAKIWSFDLLSPLHELK--GHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp CCE--EECSSSSSCEEECCSSCCCEECSSSSSCSBCCC--CCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred EEE--EECCCCCEEEEEcCCCcEEEEECCCcceeeeec--cCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 888 899999999999999999999999999999888 8999999999999999999999 9999999998754
No 42
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.4e-41 Score=324.93 Aligned_cols=282 Identities=14% Similarity=0.245 Sum_probs=240.2
Q ss_pred eeecCeEEEEeCCC----CCEEEEeeCCCcEEEEcCCCCeeEEEeec-----CCcceeEEEEeeC----CCeEEEeeCCC
Q psy18231 162 FVLSGLMHTRFPVD----GSYCLTCGSDKKIKLWNPYRNLLLKTYGG-----HAHEVNDATAACD----SSQIASGASDK 228 (540)
Q Consensus 162 ~h~~~v~~v~~spd----g~~lat~~~dg~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~sp~----~~~l~s~s~dg 228 (540)
+|.++|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |...|++++|+|+ +++|++++.||
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 69999999999984 44566666678999999998887777754 5578999999998 67999999999
Q ss_pred eEEEEEcCCCceeEeccccCCceeEEEECC-CCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEe
Q psy18231 229 SVILWEVTTGQPVRRWREHASKVTCVKFNE-DSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSL 307 (540)
Q Consensus 229 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (540)
.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++. ..
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~--------------------- 152 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL--VA--------------------- 152 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE--EE---------------------
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE--EE---------------------
Confidence 999999999999999999999999999999 899999999999999999987641 00
Q ss_pred ecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEec
Q psy18231 308 VKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVS 387 (540)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 387 (540)
....+..|...|.+++|+
T Consensus 153 --------------------------------------------------------------~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 153 --------------------------------------------------------------IFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp --------------------------------------------------------------EECSTTSCSSCEEEEEEC
T ss_pred --------------------------------------------------------------EecccccccCceeEEEEC
Confidence 001235788999999999
Q ss_pred C--CeeEeeeCCCeEEEEeCCCCceEEee------------------------------eCCceEEEEEecCCcEEEeec
Q psy18231 388 D--HEILTASLDCRIRRYDIRTGNLVTDY------------------------------VGEPIVDACFTRDCQCILTCS 435 (540)
Q Consensus 388 ~--~~l~~~~~dg~i~iwd~~~~~~~~~~------------------------------~~~~i~~~~~sp~~~~l~~~~ 435 (540)
| +.+++++.||.|++||+++++....+ +...|.+++|+ ++++++++
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~ 248 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKS 248 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEEC
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEe
Confidence 8 78999999999999999987654322 34679999998 77999999
Q ss_pred CCCeEEEEeccccch--------------hhhhccCcCCcceEEEEecCC--CCeEEEeeCCCcEEEEEecCCccee---
Q psy18231 436 TDECLRLFDKATGEL--------------LEEYKGHKSGDFRIECCLDSK--DSQIFCGSSDGKIYKWQLVDSSQIS--- 496 (540)
Q Consensus 436 ~dg~i~i~d~~~~~~--------------~~~~~~~~~~v~~~~~~~s~~--~~~l~s~s~dg~i~iwd~~~~~~~~--- 496 (540)
.|+.|++||+.+++. +..+..|...+..+ +|+|+ +++|++|+.||.|++||+.+++...
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 326 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYM--RFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKC 326 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCC--CCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEE
T ss_pred cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEE--EEcCCCCCcEEEEEecCCcEEEEECCCCCCccccc
Confidence 999999999987754 66777888889888 67777 9999999999999999999887543
Q ss_pred -EEEeccc--ceeeeEEEEcCCCcEEEeec-CCeeEEEEccc
Q psy18231 497 -TLIHSVG--KAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEE 534 (540)
Q Consensus 497 -~~~~~~~--~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~ 534 (540)
.+. .| ...|++++|+|++++|++++ ||.|++||+.+
T Consensus 327 ~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 327 TTLT--HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEEC--CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred eEEc--ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 555 55 79999999999999999999 99999999853
No 43
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-41 Score=330.63 Aligned_cols=292 Identities=15% Similarity=0.231 Sum_probs=252.1
Q ss_pred eeecCeEEEEeCCCCC-EEEEe----------eCCCcEEEEcCCCCe---eEEEeecCCcceeEEEEeeCCCeEEEeeCC
Q psy18231 162 FVLSGLMHTRFPVDGS-YCLTC----------GSDKKIKLWNPYRNL---LLKTYGGHAHEVNDATAACDSSQIASGASD 227 (540)
Q Consensus 162 ~h~~~v~~v~~spdg~-~lat~----------~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d 227 (540)
.+...|.+++|+|+++ +|++| +.|+.|++||+.++. .+..+ .|...|++++|+|++++|++++.|
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d 88 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDN 88 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESS
T ss_pred hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccC
Confidence 3556799999999997 99999 889999999998875 34444 489999999999999999999999
Q ss_pred CeEEEEEcCC----CceeEeccccCCceeEEEECCC-CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCcee
Q psy18231 228 KSVILWEVTT----GQPVRRWREHASKVTCVKFNED-SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSIT 302 (540)
Q Consensus 228 g~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (540)
|.|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.||.|++||+.+.+......
T Consensus 89 g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--------------- 153 (416)
T 2pm9_A 89 GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY--------------- 153 (416)
T ss_dssp SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC---------------
T ss_pred CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc---------------
Confidence 9999999988 4578888999999999999998 8999999999999999998765211000
Q ss_pred EEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEE
Q psy18231 303 SVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSIT 382 (540)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 382 (540)
..........|...|.
T Consensus 154 ----------------------------------------------------------------~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 154 ----------------------------------------------------------------TPLTPGQSMSSVDEVI 169 (416)
T ss_dssp ----------------------------------------------------------------CCBCCCCSCCSSCCCC
T ss_pred ----------------------------------------------------------------cccccccccCCCCCee
Confidence 0000113456888999
Q ss_pred EEEecC---CeeEeeeCCCeEEEEeCCCCceEEeeeC--------CceEEEEEecCC-cEEEeecCCC---eEEEEeccc
Q psy18231 383 SVHVSD---HEILTASLDCRIRRYDIRTGNLVTDYVG--------EPIVDACFTRDC-QCILTCSTDE---CLRLFDKAT 447 (540)
Q Consensus 383 ~l~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------~~i~~~~~sp~~-~~l~~~~~dg---~i~i~d~~~ 447 (540)
+++|+| .++++++.||.|++||+++++.+..+.. ..+.+++|+|++ .++++++.|+ .|++||+++
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 999997 5799999999999999999988877753 569999999997 6899999998 999999998
Q ss_pred c-chhhhhc-cCcCCcceEEEEecC-CCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCC-cEEEeec
Q psy18231 448 G-ELLEEYK-GHKSGDFRIECCLDS-KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR-KHIMSAC 523 (540)
Q Consensus 448 ~-~~~~~~~-~~~~~v~~~~~~~s~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~-~~l~s~~ 523 (540)
+ +.+..+. +|...+..+ +|+| ++++|++++.||.|++||+.+++++..+. .|...|.+++|+|++ .+|++++
T Consensus 250 ~~~~~~~~~~~~~~~v~~~--~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 250 ANTPLQTLNQGHQKGILSL--DWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP--ARGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp TTSCSBCCCSCCSSCEEEE--EECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE--CSSSCCCCEEECTTCTTEEEECC
T ss_pred CCCCcEEeecCccCceeEE--EeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec--CCCCceEEEEECCCCCCEEEEEe
Confidence 6 6778888 899988888 8999 89999999999999999999999999998 899999999999999 8999999
Q ss_pred -CCeeEEEEcccccC
Q psy18231 524 -GNNVKLWTAEEDYG 537 (540)
Q Consensus 524 -d~~i~iw~~~~~~~ 537 (540)
|+.|++|++.+...
T Consensus 326 ~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 326 FDNKIEVQTLQNLTN 340 (416)
T ss_dssp SSSEEEEEESCCCCC
T ss_pred cCCcEEEEEccCCCC
Confidence 99999999987643
No 44
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=318.10 Aligned_cols=280 Identities=18% Similarity=0.262 Sum_probs=229.2
Q ss_pred ceeccccchhhhhhcccccceeeeecccccce------eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCC--eeE
Q psy18231 128 LLFSLPRTITRILYELPKEWSIRVYRPLTVNR------ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRN--LLL 199 (540)
Q Consensus 128 ~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~--~~~ 199 (540)
+.|+++ ..++++++.|++|++|+...... ..+|.+.|.+++|+|+|++|++|+.|++|++||..++ +.+
T Consensus 22 l~~sp~---g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~ 98 (345)
T 3fm0_A 22 LAWNPA---GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECV 98 (345)
T ss_dssp EEECTT---SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEE
T ss_pred EEECCC---CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEE
Confidence 455555 35677889999999999876431 1369999999999999999999999999999998776 467
Q ss_pred EEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc---eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEE
Q psy18231 200 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ---PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276 (540)
Q Consensus 200 ~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 276 (540)
..+.+|...|.+++|+|++++|++++.|++|++||+.++. .+..+.+|...|.+++|+|++++|++++.|++|++||
T Consensus 99 ~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~ 178 (345)
T 3fm0_A 99 TTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYR 178 (345)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred EEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 8889999999999999999999999999999999998764 4566789999999999999999999999999999999
Q ss_pred ecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccce
Q psy18231 277 VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
+++++..
T Consensus 179 ~~~~~~~------------------------------------------------------------------------- 185 (345)
T 3fm0_A 179 EEEDDWV------------------------------------------------------------------------- 185 (345)
T ss_dssp EETTEEE-------------------------------------------------------------------------
T ss_pred ecCCCEE-------------------------------------------------------------------------
Confidence 8765310
Q ss_pred ecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCC---------------ceEEeee---C
Q psy18231 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTG---------------NLVTDYV---G 416 (540)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~---------------~~~~~~~---~ 416 (540)
+...+.+|...|.+++|+| ++|++++.|++|++||.... +++..+. .
T Consensus 186 -------------~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 252 (345)
T 3fm0_A 186 -------------CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHS 252 (345)
T ss_dssp -------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCS
T ss_pred -------------EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCC
Confidence 1114567899999999998 78999999999999996422 2233333 3
Q ss_pred CceEEEEEecCCcEEEeecCCCeEEEEeccccch---------hhhhccCcCCcceEEEEecCCCC-eEEEeeCCCcEEE
Q psy18231 417 EPIVDACFTRDCQCILTCSTDECLRLFDKATGEL---------LEEYKGHKSGDFRIECCLDSKDS-QIFCGSSDGKIYK 486 (540)
Q Consensus 417 ~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~---------~~~~~~~~~~v~~~~~~~s~~~~-~l~s~s~dg~i~i 486 (540)
..|.+++|+|++..|++++.|+.|++|+...... .....+|...|.++ +|+|++. +||+|+.||+|++
T Consensus 253 ~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v--~~~p~~~~~laS~s~Dg~v~~ 330 (345)
T 3fm0_A 253 RTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCV--AWNPKEPGLLASCSDDGEVAF 330 (345)
T ss_dssp SCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEE--EECSSSTTEEEEEETTSCEEE
T ss_pred CcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEe--EEeCCCceEEEEcCCCCcEEE
Confidence 5799999999999999999999999999875432 12345788888888 8999984 8999999999999
Q ss_pred EEecCCcceeEE
Q psy18231 487 WQLVDSSQISTL 498 (540)
Q Consensus 487 wd~~~~~~~~~~ 498 (540)
|++.+++.....
T Consensus 331 W~~~~~~~~~~~ 342 (345)
T 3fm0_A 331 WKYQRPEGLHHH 342 (345)
T ss_dssp EEECC-------
T ss_pred EEecCCCCcccc
Confidence 999888776554
No 45
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-40 Score=309.66 Aligned_cols=275 Identities=21% Similarity=0.283 Sum_probs=242.6
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC-
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG- 238 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~- 238 (540)
..+|.+.|++++| |++++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.||.|++|++...
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 92 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS 92 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC
Confidence 4579999999999 99999999999999999999999999999999999999999999999999999999999998765
Q ss_pred --ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccc
Q psy18231 239 --QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLS 316 (540)
Q Consensus 239 --~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (540)
+.+..+.+|...|.++.| +++++++++.||.|++|| ..+
T Consensus 93 ~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~----------------------------------- 133 (313)
T 3odt_A 93 GEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGS----------------------------------- 133 (313)
T ss_dssp TSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTE-----------------------------------
T ss_pred CCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCc-----------------------------------
Confidence 556778899999999999 577999999999999999 221
Q ss_pred cCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeEe
Q psy18231 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILT 393 (540)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~ 393 (540)
....+..|...+.++.+.+ +.+++
T Consensus 134 -----------------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 134 -----------------------------------------------------LVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp -----------------------------------------------------EEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred -----------------------------------------------------EEEecccCCCceeEEEEccCCCCEEEE
Confidence 0114456788899998865 88999
Q ss_pred eeCCCeEEEEeCCCCceEEeee---CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecC
Q psy18231 394 ASLDCRIRRYDIRTGNLVTDYV---GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDS 470 (540)
Q Consensus 394 ~~~dg~i~iwd~~~~~~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~ 470 (540)
++.||.|++||. .+....+. ...+.+++|+|++. +++++.||.|++||+++++.+..+.+|...+..+ +|+|
T Consensus 161 ~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~--~~~~ 235 (313)
T 3odt_A 161 ASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCI--KLLP 235 (313)
T ss_dssp EETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE--EECT
T ss_pred EECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEE--EEec
Confidence 999999999994 44444443 46899999999999 9999999999999999999999999999999888 8999
Q ss_pred CCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEccccc
Q psy18231 471 KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 471 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~~ 536 (540)
++ .|++++.||.|++||+.+++.+..+. .|...|.+++|+|+++++ +++ ||.|++|+++++.
T Consensus 236 ~~-~l~~~~~dg~v~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~-~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 236 NG-DIVSCGEDRTVRIWSKENGSLKQVIT--LPAISIWSVDCMSNGDII-VGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp TS-CEEEEETTSEEEEECTTTCCEEEEEE--CSSSCEEEEEECTTSCEE-EEETTSCEEEEESCGGG
T ss_pred CC-CEEEEecCCEEEEEECCCCceeEEEe--ccCceEEEEEEccCCCEE-EEeCCCcEEEEeCCCCc
Confidence 99 69999999999999999999999998 889999999999999955 566 9999999998764
No 46
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=7.9e-40 Score=336.98 Aligned_cols=387 Identities=14% Similarity=0.171 Sum_probs=284.2
Q ss_pred cceecc--ccchhhhhhcccccceeeeeccccc--------c---eeeeeecCeEEEEeCCCCCEEEEeeCC----CcEE
Q psy18231 127 PLLFSL--PRTITRILYELPKEWSIRVYRPLTV--------N---RELFVLSGLMHTRFPVDGSYCLTCGSD----KKIK 189 (540)
Q Consensus 127 ~~~~s~--~~~~~~~~~~~~~~~~i~~~~~~~~--------~---~~~~h~~~v~~v~~spdg~~lat~~~d----g~i~ 189 (540)
.+.|++ + ...++.++.++.|++|+..+. . ....|..+|.+++|+|++++|++++.+ +.|.
T Consensus 69 ~~~~sp~~~---~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 69 TVKFSPIKG---SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp EEEECSSTT---CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEE
T ss_pred EEEECcCCC---CCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEE
Confidence 445555 4 346677788999999999633 1 223488999999999999999999987 7899
Q ss_pred EEcCCCCeeEEEeecCCcceeEEEEeeCCC-eEEEeeCCCeEEEEEcCCCceeEeccccCC---ceeEEEECCC-CCEEE
Q psy18231 190 LWNPYRNLLLKTYGGHAHEVNDATAACDSS-QIASGASDKSVILWEVTTGQPVRRWREHAS---KVTCVKFNED-SSVVI 264 (540)
Q Consensus 190 iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~---~v~~~~~~~~-~~~l~ 264 (540)
+|| +++.+..+.+|...|.+++|+|+++ ++++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|+
T Consensus 146 ~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 223 (615)
T 1pgu_A 146 SWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVI 223 (615)
T ss_dssp ETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEE
T ss_pred EEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEE
Confidence 998 6778889999999999999999998 799999999999999999999999999999 9999999999 99999
Q ss_pred EecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeeccc------------
Q psy18231 265 SGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYL------------ 332 (540)
Q Consensus 265 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 332 (540)
+++.||.|++||+++++....... ....+...+..+. +.....+..+.....+..|+....
T Consensus 224 ~~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~v~~~~---~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 296 (615)
T 1pgu_A 224 TVGSDRKISCFDGKSGEFLKYIED----DQEPVQGGIFALS---WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ 296 (615)
T ss_dssp EEETTCCEEEEETTTCCEEEECCB----TTBCCCSCEEEEE---ESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC
T ss_pred EEeCCCeEEEEECCCCCEeEEecc----cccccCCceEEEE---EcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc
Confidence 999999999999988763111100 0002222333332 222222333333333333332211
Q ss_pred -ccceeeeeeccceeEEEeecccceecccccccccccchhhhh---------------------------------hccc
Q psy18231 333 -NGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL---------------------------------KEAR 378 (540)
Q Consensus 333 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~ 378 (540)
...........+..+......+...+++..... ....+ ..|.
T Consensus 297 ~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~ 372 (615)
T 1pgu_A 297 LGNQQVGVVATGNGRIISLSLDGTLNFYELGHDE----VLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHS 372 (615)
T ss_dssp GGGCEEEEEEEETTEEEEEETTSCEEEEETTEEE----EEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCC
T ss_pred ccCceeEEEeCCCCeEEEEECCCCEEEEECCCCc----EEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCccc
Confidence 111222222233333333333333333322110 00111 4567
Q ss_pred ccEEEEEecC-CeeEeeeCCCeEEEEeCCC----------------------------------CceEEeee-CCceEEE
Q psy18231 379 DSITSVHVSD-HEILTASLDCRIRRYDIRT----------------------------------GNLVTDYV-GEPIVDA 422 (540)
Q Consensus 379 ~~v~~l~~~~-~~l~~~~~dg~i~iwd~~~----------------------------------~~~~~~~~-~~~i~~~ 422 (540)
..|.++++.+ ..+++++.|+.+++||+.+ ++.+..+. ...+.++
T Consensus 373 ~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (615)
T 1pgu_A 373 NLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAV 452 (615)
T ss_dssp SCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEE
T ss_pred CceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEE
Confidence 7788888865 7788888888888887753 22333332 3578888
Q ss_pred EEecCCcEEEeecC-CCeEEEEeccccchh-hhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe
Q psy18231 423 CFTRDCQCILTCST-DECLRLFDKATGELL-EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 500 (540)
Q Consensus 423 ~~sp~~~~l~~~~~-dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 500 (540)
+|+ +++|++++. |+.|++||+.+++.. ..+..|...+..+ +|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 453 ~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~- 527 (615)
T 1pgu_A 453 SLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYI--SISPSETYIAAGDVMGKILLYDLQSREVKTSRW- 527 (615)
T ss_dssp EEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEE--EECTTSSEEEEEETTSCEEEEETTTTEEEECCS-
T ss_pred EEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEE--EECCCCCEEEEcCCCCeEEEeeCCCCcceeEee-
Confidence 888 889999999 999999999988765 7778899988887 899999999999999999999999999988876
Q ss_pred cc-cceeeeEEEEcC----------CCcEEEeec-CCeeEEEEcccc
Q psy18231 501 SV-GKAVVNSLCSHP----------TRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 501 ~~-~~~~v~~l~~s~----------d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
+ |...|++++|+| ++++|++++ |+.|++|+++++
T Consensus 528 -~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 528 -AFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp -CCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred -cCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 6 999999999999 999999999 999999999875
No 47
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.1e-39 Score=321.80 Aligned_cols=299 Identities=20% Similarity=0.375 Sum_probs=262.5
Q ss_pred hhhhcccccceeeeecccccce---eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEE
Q psy18231 138 RILYELPKEWSIRVYRPLTVNR---ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 214 (540)
Q Consensus 138 ~~~~~~~~~~~i~~~~~~~~~~---~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 214 (540)
..+++++.+++|++|+..+... ..+|.+.|.+++|+ +++|++|+.||+|++||+.+++.+..+.+|...|.+++|
T Consensus 130 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 207 (445)
T 2ovr_B 130 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 207 (445)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEe
Confidence 4667788999999999877553 34599999999997 569999999999999999999999999999999999999
Q ss_pred eeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhh
Q psy18231 215 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294 (540)
Q Consensus 215 sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 294 (540)
+ ++.+++++.||+|++||+.+++.+..+.+|...|.+++| +++++++++.||.|++||+++++.
T Consensus 208 ~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~------------ 271 (445)
T 2ovr_B 208 H--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETC------------ 271 (445)
T ss_dssp E--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEE------------
T ss_pred c--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcE------------
Confidence 5 678999999999999999999999999999999999999 678999999999999999887641
Q ss_pred hhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhh
Q psy18231 295 KEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL 374 (540)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (540)
+..+
T Consensus 272 ----------------------------------------------------------------------------~~~~ 275 (445)
T 2ovr_B 272 ----------------------------------------------------------------------------LHTL 275 (445)
T ss_dssp ----------------------------------------------------------------------------EEEE
T ss_pred ----------------------------------------------------------------------------eEEe
Confidence 1144
Q ss_pred hcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeeeCC--ceEEEEEecCCcEEEeecCCCeEEEEeccccchhh
Q psy18231 375 KEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATGELLE 452 (540)
Q Consensus 375 ~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 452 (540)
.+|...|.++.+++..+++++.||.|++||+++++.+..+.++ .+.++. ++++++++++.||.|++||+++++.+.
T Consensus 276 ~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg~i~vwd~~~~~~~~ 353 (445)
T 2ovr_B 276 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME--LKDNILVSGNADSTVKIWDIKTGQCLQ 353 (445)
T ss_dssp CCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEE
T ss_pred cCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE--EeCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 5788899999998899999999999999999999999888765 455555 467899999999999999999999888
Q ss_pred hhcc---CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe---cccceeeeEEEEcCCCcEEEeec-CC
Q psy18231 453 EYKG---HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH---SVGKAVVNSLCSHPTRKHIMSAC-GN 525 (540)
Q Consensus 453 ~~~~---~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~l~~s~d~~~l~s~~-d~ 525 (540)
.+.. |...+.++ +|+ +++|++|+.||.|++||+.+++.+..+.. ..|.+.|.+++|+|++.+|++++ ||
T Consensus 354 ~~~~~~~~~~~v~~~--~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 354 TLQGPNKHQSAVTCL--QFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp EECSTTSCSSCEEEE--EEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred EEccCCCCCCCEEEE--EEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 8876 77777766 564 67999999999999999999999888831 26889999999999999999999 99
Q ss_pred e----eEEEEccccc
Q psy18231 526 N----VKLWTAEEDY 536 (540)
Q Consensus 526 ~----i~iw~~~~~~ 536 (540)
+ |.+||++.+.
T Consensus 430 ~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 430 TEETKLLVLDFDVDM 444 (445)
T ss_dssp SSCCEEEEEECCCCC
T ss_pred CCccEEEEEECCCCC
Confidence 7 9999998764
No 48
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.8e-39 Score=322.31 Aligned_cols=303 Identities=19% Similarity=0.309 Sum_probs=253.2
Q ss_pred eeeeeecCe-EEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC
Q psy18231 159 RELFVLSGL-MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237 (540)
Q Consensus 159 ~~~~h~~~v-~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 237 (540)
...+|.+.+ .++.| ++++|++|+.||+|++||+.+++.+..+.+|.+.|++++|+|++ +|++|+.||+|++||+++
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence 345688775 66665 56799999999999999999999999999999999999999988 999999999999999999
Q ss_pred CceeEeccccCCceeEEEEC--CCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccc
Q psy18231 238 GQPVRRWREHASKVTCVKFN--EDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHL 315 (540)
Q Consensus 238 ~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (540)
++.+..+.+|.+.|.+++|+ ++++++++++.||+|++||+++........... ..
T Consensus 193 ~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~---------~~-------------- 249 (464)
T 3v7d_B 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH---------DY-------------- 249 (464)
T ss_dssp TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------C---------CS--------------
T ss_pred CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccC---------Cc--------------
Confidence 99999999999999999998 577899999999999999998876321110000 00
Q ss_pred ccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeee
Q psy18231 316 SNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTAS 395 (540)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~ 395 (540)
....... .........+.+|...+.++..+++.+++++
T Consensus 250 ------------------------------~~~~~~~------------~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 287 (464)
T 3v7d_B 250 ------------------------------PLVFHTP------------EENPYFVGVLRGHMASVRTVSGHGNIVVSGS 287 (464)
T ss_dssp ------------------------------SEEESCG------------GGCTTEEEEECCCSSCEEEEEEETTEEEEEE
T ss_pred ------------------------------ceEeecc------------CCCeEEEEEccCccceEEEEcCCCCEEEEEe
Confidence 0000000 0000112255678889999988889999999
Q ss_pred CCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCC
Q psy18231 396 LDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 473 (540)
Q Consensus 396 ~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~ 473 (540)
.||.|++||+++++.+..+.+ ..|.+++|+|+++++++++.||.|++||+++++.+..+.+|...+..+ +++ ++
T Consensus 288 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~--~~~--~~ 363 (464)
T 3v7d_B 288 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLL--RLS--DK 363 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE--EEC--SS
T ss_pred CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEE--EEc--CC
Confidence 999999999999999888875 579999999999999999999999999999999999999999998877 665 57
Q ss_pred eEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEccccc
Q psy18231 474 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 536 (540)
Q Consensus 474 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~~~~ 536 (540)
+|++++.||.|++||+.+++...... |...+..++|+|++++|++++|+.|++||++++.
T Consensus 364 ~l~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 364 FLVSAAADGSIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGK 423 (464)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEETTEEEEEETTTCC
T ss_pred EEEEEeCCCcEEEEECCCCceeeeec---CCCCccEEEEEeCCCEEEEecCCeEEEEECCCCc
Confidence 99999999999999999888766664 6777889999999999999989999999998753
No 49
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-40 Score=309.28 Aligned_cols=264 Identities=18% Similarity=0.250 Sum_probs=211.8
Q ss_pred hhhcccccceeeeecccccc----ee--ee-eecCeEEEEeCCCCCEEEEeeCCCcEEEEcCC-------CCeeEEEeec
Q psy18231 139 ILYELPKEWSIRVYRPLTVN----RE--LF-VLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPY-------RNLLLKTYGG 204 (540)
Q Consensus 139 ~~~~~~~~~~i~~~~~~~~~----~~--~~-h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~-------~~~~~~~~~~ 204 (540)
++++++.+++|++|+..... .. .. |.+.|.+++|+|++++|++|+.|++|+|||+. +.+.+..+.+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC
Confidence 67888999999999987531 11 23 99999999999999999999999999999984 3456778899
Q ss_pred CCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC----ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCC
Q psy18231 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTG----QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280 (540)
Q Consensus 205 h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 280 (540)
|...|.+++|+|++++|++++.|++|++||+... +++..+.+|...|.+++|+|++++|++++.|++|++||..++
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999999999999999999999999999999432 456778899999999999999999999999999999998754
Q ss_pred CCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccc
Q psy18231 281 SHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGD 360 (540)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (540)
...
T Consensus 186 ~~~----------------------------------------------------------------------------- 188 (330)
T 2hes_X 186 DWE----------------------------------------------------------------------------- 188 (330)
T ss_dssp EEE-----------------------------------------------------------------------------
T ss_pred Cee-----------------------------------------------------------------------------
Confidence 210
Q ss_pred ccccccccchhhhhhcccccEEEEEecCC----eeEeeeCCCeEEEEeCCCC--------ceEEeee---CCceEEEEEe
Q psy18231 361 VTPISIHNSCFQALKEARDSITSVHVSDH----EILTASLDCRIRRYDIRTG--------NLVTDYV---GEPIVDACFT 425 (540)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~----~l~~~~~dg~i~iwd~~~~--------~~~~~~~---~~~i~~~~~s 425 (540)
++..+.+|...|.+++|+|. .+++++.|++|++||++++ .....+. ...|.+++|+
T Consensus 189 ---------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 259 (330)
T 2hes_X 189 ---------CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWG 259 (330)
T ss_dssp ---------EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEEC
T ss_pred ---------EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEc
Confidence 12256689999999999983 6899999999999998764 2333332 3579999999
Q ss_pred cCCcEEEeecCCCeEEEEeccccc--hh-hhhccCcC-CcceEEEEecC--CCCeEEEeeCCCcEEEEEecC
Q psy18231 426 RDCQCILTCSTDECLRLFDKATGE--LL-EEYKGHKS-GDFRIECCLDS--KDSQIFCGSSDGKIYKWQLVD 491 (540)
Q Consensus 426 p~~~~l~~~~~dg~i~i~d~~~~~--~~-~~~~~~~~-~v~~~~~~~s~--~~~~l~s~s~dg~i~iwd~~~ 491 (540)
+++ +|++++.||.|++||..+++ .+ ..+.+|.. .+..+ +|+| ++++|++|+.||+|++||+++
T Consensus 260 ~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v--~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 260 FNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVV--KWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEE--EEC-----CCEEEEETTSEEEEEEC--
T ss_pred CCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEE--EEecCCCceEEEEecCCCcEEEEEecc
Confidence 765 89999999999999988763 23 23456776 67777 7888 788999999999999999764
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-41 Score=326.77 Aligned_cols=283 Identities=15% Similarity=0.149 Sum_probs=227.2
Q ss_pred eeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCC--eeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc
Q psy18231 162 FVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRN--LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239 (540)
Q Consensus 162 ~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 239 (540)
.|.++|++++|+|++++||+|+.|+.|++||+.++ +.+..+.+|...|++++|+|++++|++++.|++|++||+.+++
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 45689999999999999999999999999999988 7888899999999999999999999999999999999999887
Q ss_pred ---eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccc
Q psy18231 240 ---PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLS 316 (540)
Q Consensus 240 ---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (540)
....+..|...|.+++|+|++++|++++.|+.|++||+++++....
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~------------------------------- 137 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV------------------------------- 137 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC-------------------------------
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee-------------------------------
Confidence 6677889999999999999999999999999999999987651000
Q ss_pred cCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhc-ccccEEEEEecC--CeeEe
Q psy18231 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKE-ARDSITSVHVSD--HEILT 393 (540)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~--~~l~~ 393 (540)
...+.. |...|.+++|+| +++++
T Consensus 138 ------------------------------------------------------~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 138 ------------------------------------------------------SKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp ------------------------------------------------------CEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred ------------------------------------------------------eeEeecccCCCeEEEEEcCCCCEEEE
Confidence 113334 889999999998 78999
Q ss_pred eeCCCeEEEEeCCC------------------CceEEee-eCCceEEEEEecCCcEEEeecCCCeEEEEeccccch----
Q psy18231 394 ASLDCRIRRYDIRT------------------GNLVTDY-VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL---- 450 (540)
Q Consensus 394 ~~~dg~i~iwd~~~------------------~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~---- 450 (540)
++.|+.|++||++. ++++..+ +...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 243 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA 243 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence 99999999999852 4444444 225799999999999999999999999999999988
Q ss_pred hhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCc--c-------------------------e--------
Q psy18231 451 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS--Q-------------------------I-------- 495 (540)
Q Consensus 451 ~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~--~-------------------------~-------- 495 (540)
+..+.+|...+..+ +|+|++++|++|+.|+.+ +|+..... . .
T Consensus 244 ~~~~~~~~~~v~~~--~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (377)
T 3dwl_C 244 LITVKLSQLPLRSL--LWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTAL 320 (377)
T ss_dssp CCCEECSSSCEEEE--EEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------
T ss_pred eEeecCCCCceEEE--EEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccc
Confidence 88999999998887 899999999999877766 66654211 0 0
Q ss_pred -eEEE--------------ecccceeeeEEEEcCCC-c---EEEeec-CCeeEEEEc
Q psy18231 496 -STLI--------------HSVGKAVVNSLCSHPTR-K---HIMSAC-GNNVKLWTA 532 (540)
Q Consensus 496 -~~~~--------------~~~~~~~v~~l~~s~d~-~---~l~s~~-d~~i~iw~~ 532 (540)
..+. ...|...|+++++.++. . .|+|++ ||.|++||+
T Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 321 RSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0010 01289999999976544 2 699999 999999985
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.8e-41 Score=328.16 Aligned_cols=278 Identities=18% Similarity=0.228 Sum_probs=239.3
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEec
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (540)
..+++++|+|++++|++++.||.|++||+.+++....+..| ..+....|+|++++|++++.||.|++||+.+++....+
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 44668899999999999999999999999988777666665 45556678999999999999999999999999999888
Q ss_pred cccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEE
Q psy18231 245 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLV 324 (540)
Q Consensus 245 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (540)
.+|.+.|.+++|+|++++|++++.||+|++||+++++.
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~------------------------------------------ 173 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN------------------------------------------ 173 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC------------------------------------------
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC------------------------------------------
Confidence 99999999999999999999999999999999987652
Q ss_pred EeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEE
Q psy18231 325 FAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRR 402 (540)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~i 402 (540)
...+.+|...|.+++|+| ..+++++.||.|++
T Consensus 174 ----------------------------------------------~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 174 ----------------------------------------------PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp ----------------------------------------------CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ----------------------------------------------ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 114567899999999998 78999999999999
Q ss_pred EeCCCCceEEeeeC-----CceEE---------------------EEEecCCcEEEeecCCCeEEEEeccccchhhhhc-
Q psy18231 403 YDIRTGNLVTDYVG-----EPIVD---------------------ACFTRDCQCILTCSTDECLRLFDKATGELLEEYK- 455 (540)
Q Consensus 403 wd~~~~~~~~~~~~-----~~i~~---------------------~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 455 (540)
||+++++.+..+.. ..+.+ ++|+|++++|++++.||.|++||+++++.+..+.
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 99999998888753 23444 4557899999999999999999999988766654
Q ss_pred cCcCCcceEEEEecCCCC-eEEEeeCCCcEEEEEecCCcc-eeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEc
Q psy18231 456 GHKSGDFRIECCLDSKDS-QIFCGSSDGKIYKWQLVDSSQ-ISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTA 532 (540)
Q Consensus 456 ~~~~~v~~~~~~~s~~~~-~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~ 532 (540)
.|...+..+ +|+|+++ +|++|+.||.|++||+.+++. +..+.. .|...|.++.| +++++|++++ |+.|++|++
T Consensus 288 ~~~~~v~~~--~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 288 KFTCSCNSL--TVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI-NEGTPINNVYF-AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TTSSCEEEE--EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE-STTSCEEEEEE-ETTEEEEEETTTEEEEEEEE
T ss_pred ccCCCceeE--EEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc-cCCCCceEEEe-CCCCEEEEecCCccEEEEec
Confidence 477778777 8999999 999999999999999998755 666662 47788888865 5788999999 999999999
Q ss_pred ccc
Q psy18231 533 EED 535 (540)
Q Consensus 533 ~~~ 535 (540)
...
T Consensus 364 ~~~ 366 (420)
T 3vl1_A 364 SDP 366 (420)
T ss_dssp CCT
T ss_pred cCC
Confidence 874
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-41 Score=331.27 Aligned_cols=300 Identities=12% Similarity=0.068 Sum_probs=223.4
Q ss_pred hhhcccccceeeeecccccce-------eeeeecCeEEEEeCCC------CCEEEEeeCCCcEEEEcCCCCee-------
Q psy18231 139 ILYELPKEWSIRVYRPLTVNR-------ELFVLSGLMHTRFPVD------GSYCLTCGSDKKIKLWNPYRNLL------- 198 (540)
Q Consensus 139 ~~~~~~~~~~i~~~~~~~~~~-------~~~h~~~v~~v~~spd------g~~lat~~~dg~i~iwd~~~~~~------- 198 (540)
++++.+.+++|++|+..+... ...|.+.|.+++|+|+ +.+||+++.||+|+|||+.++..
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 456778999999999765432 2346789999999997 57999999999999999976632
Q ss_pred ----EEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc-eeEeccccCCceeEE--EECCCC-CEEEEecCCC
Q psy18231 199 ----LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ-PVRRWREHASKVTCV--KFNEDS-SVVISGSQDN 270 (540)
Q Consensus 199 ----~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~--~~~~~~-~~l~s~~~dg 270 (540)
...+.+|...|++++|+|+ ..|++|+.||+|++||+++++ +...+.+|...|.++ .|+|++ .+|+|++.||
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~ 333 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG 333 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS
T ss_pred ecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC
Confidence 3467889999999999986 489999999999999999774 455688999999999 578887 8999999999
Q ss_pred cEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEe
Q psy18231 271 TVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLL 350 (540)
Q Consensus 271 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (540)
+|++||+++++.
T Consensus 334 tvklWD~~~~~~-------------------------------------------------------------------- 345 (524)
T 2j04_B 334 YFYIFNPKDIAT-------------------------------------------------------------------- 345 (524)
T ss_dssp EEEEECGGGHHH--------------------------------------------------------------------
T ss_pred eEEEEECCCCCc--------------------------------------------------------------------
Confidence 999999986541
Q ss_pred ecccceecccccccccccchhhhhhccc--ccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEE
Q psy18231 351 DFLGSTQIGDVTPISIHNSCFQALKEAR--DSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACF 424 (540)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~ 424 (540)
...+.+|. ..|.+++|+| ..+++++.|++|++||++++.++..+.+ ..|++++|
T Consensus 346 --------------------~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~ 405 (524)
T 2j04_B 346 --------------------TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGV 405 (524)
T ss_dssp --------------------HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEEC
T ss_pred --------------------ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEe
Confidence 11222333 2477899999 6789999999999999999987766654 58999999
Q ss_pred ecCCcEEEeecCCCeEEEEeccccchhhhhccCc---C--CcceEEEEecCCCCeEEEeeCCCcEEEEEec-CCcceeEE
Q psy18231 425 TRDCQCILTCSTDECLRLFDKATGELLEEYKGHK---S--GDFRIECCLDSKDSQIFCGSSDGKIYKWQLV-DSSQISTL 498 (540)
Q Consensus 425 sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~--~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~ 498 (540)
+|+|++|++|+.||+|++||+..+ .+..++.+. . .++ .++|+|+++.+. ... .+++|+.. ++..+..+
T Consensus 406 Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~--~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l 479 (524)
T 2j04_B 406 SRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLW--KWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKI 479 (524)
T ss_dssp CSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEE--ECBCCSSSCEEE-ECC--CCCCCC-----------
T ss_pred CCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEE--EeccCCCCCeEE-ccC--CceecccccCCcceeee
Confidence 999999999999999999998654 333322111 1 233 448999998552 222 23344432 56677777
Q ss_pred EecccceeeeEEEEcCCCc---EEEeec-CCeeEEEEcccc
Q psy18231 499 IHSVGKAVVNSLCSHPTRK---HIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 499 ~~~~~~~~v~~l~~s~d~~---~l~s~~-d~~i~iw~~~~~ 535 (540)
. +|...|.+|+|+|+++ +|++|+ ||.|+||++..+
T Consensus 480 ~--gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 480 D--AHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp ----CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred c--CCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 7 8999999999999964 999999 999999999765
No 53
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.8e-40 Score=316.78 Aligned_cols=267 Identities=17% Similarity=0.264 Sum_probs=231.0
Q ss_pred CcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEE
Q psy18231 186 KKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVIS 265 (540)
Q Consensus 186 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 265 (540)
..+..|+..+..+..++.+|.+.|++++|+|++++|++|+.|++|+|||+.+++....+..|...|.+++|+|++++|++
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEE
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEE
Confidence 34456787788888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccce
Q psy18231 266 GSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345 (540)
Q Consensus 266 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (540)
|+.|+.+++||+.+.......
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~----------------------------------------------------------- 146 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGN----------------------------------------------------------- 146 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCS-----------------------------------------------------------
T ss_pred eeCCCcEEEEECCCCccccCC-----------------------------------------------------------
Confidence 999999999999764310000
Q ss_pred eEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeEeeeCCCeEEEEeCCCCceEEeee-------
Q psy18231 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILTASLDCRIRRYDIRTGNLVTDYV------- 415 (540)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~------- 415 (540)
......+.+|.+.|.++.|.| ..+++++.|++|++||+++++.+..+.
T Consensus 147 ----------------------~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 147 ----------------------MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp ----------------------STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred ----------------------ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 001225678899999999987 579999999999999999999887662
Q ss_pred CCceEEEEEec-CCcEEEeecCCCeEEEEecc-ccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCc
Q psy18231 416 GEPIVDACFTR-DCQCILTCSTDECLRLFDKA-TGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS 493 (540)
Q Consensus 416 ~~~i~~~~~sp-~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~ 493 (540)
...|.+++|+| ++++|++|+.|+.|++||++ .++.+..+.+|...|.++ +|+|++++|++|+.||+|++||+.+++
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v--~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSV--KFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEE--EECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEE--EEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 25799999987 88999999999999999998 457788899999999988 899999999999999999999999999
Q ss_pred ceeEEEec-----ccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 494 QISTLIHS-----VGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 494 ~~~~~~~~-----~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
.+..+... .+...|++++|+|+|++|++|+ ||.|++||+..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC
Confidence 88887621 1223489999999999999999 999999998643
No 54
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=319.79 Aligned_cols=291 Identities=17% Similarity=0.276 Sum_probs=236.5
Q ss_pred eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe-----------eEEEeecCC------------cceeEEEEeeC
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL-----------LLKTYGGHA------------HEVNDATAACD 217 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~-----------~~~~~~~h~------------~~v~~l~~sp~ 217 (540)
..|.+.|++++|+|+|++||+|+.||.|+|||+.+++ ....+.+|. ..|++++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 4578999999999999999999999999999998876 578889998 88999999999
Q ss_pred C--CeEEEeeCCCeEEEEEcCCCcee----------------------------------------EeccccCCceeEEE
Q psy18231 218 S--SQIASGASDKSVILWEVTTGQPV----------------------------------------RRWREHASKVTCVK 255 (540)
Q Consensus 218 ~--~~l~s~s~dg~i~iwd~~~~~~~----------------------------------------~~~~~h~~~v~~~~ 255 (540)
+ .+|++++.|++|++||+.+++.. ....+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 79999999999999999775432 11367999999999
Q ss_pred ECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccc
Q psy18231 256 FNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGL 335 (540)
Q Consensus 256 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (540)
|+|++++|+++ .||.|++||++.... ...
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~-~~~------------------------------------------------- 213 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDR-SFN------------------------------------------------- 213 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEE-EEE-------------------------------------------------
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCc-eee-------------------------------------------------
Confidence 99999999998 799999999974321 000
Q ss_pred eeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeEeeeCCCeEEEEeCCCCce--
Q psy18231 336 LSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILTASLDCRIRRYDIRTGNL-- 410 (540)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~~~-- 410 (540)
... . ....+..|...|.+++|+| .++++++.||.|++||+++++.
T Consensus 214 -------------~~~---------~--------~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 214 -------------IVD---------I--------KPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp -------------EEE---------C--------CCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred -------------eee---------c--------ccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 000 0 0014567899999999998 5799999999999999999886
Q ss_pred --EEeeeCC--------------ceEEEEEecCCcEEEeecCCCeEEEEeccc-cchhhhhccCcCCcc-----------
Q psy18231 411 --VTDYVGE--------------PIVDACFTRDCQCILTCSTDECLRLFDKAT-GELLEEYKGHKSGDF----------- 462 (540)
Q Consensus 411 --~~~~~~~--------------~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~----------- 462 (540)
+..+..+ .|.+++|+|++++|++++. +.|++||+++ ++++..+.+|...+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 5666543 8999999999999999999 9999999997 888889988864332
Q ss_pred --eEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe------------------------------cccceeeeEE
Q psy18231 463 --RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH------------------------------SVGKAVVNSL 510 (540)
Q Consensus 463 --~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~------------------------------~~~~~~v~~l 510 (540)
...++|+|++++|++|+.||.|++||+.+++.+..... ..+...|..+
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 422 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT 422 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEE
Confidence 11238999999999999999999999998876532110 0234568999
Q ss_pred EEcCCCcEEEeecCCeeEEEEcc
Q psy18231 511 CSHPTRKHIMSACGNNVKLWTAE 533 (540)
Q Consensus 511 ~~s~d~~~l~s~~d~~i~iw~~~ 533 (540)
+|+|++.+|++++.+.+.+|...
T Consensus 423 ~~~p~~~~la~~~~~~~~~~~~~ 445 (447)
T 3dw8_B 423 AWHPKENIIAVATTNNLYIFQDK 445 (447)
T ss_dssp EECSSSSEEEEECSSCEEEEECC
T ss_pred EECCCCCEEEEEecceeeeeccc
Confidence 99999999999995568888753
No 55
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.1e-39 Score=305.96 Aligned_cols=264 Identities=17% Similarity=0.290 Sum_probs=220.5
Q ss_pred hhhhhcccccceeeeeccccc----------ceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCC
Q psy18231 137 TRILYELPKEWSIRVYRPLTV----------NRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~----------~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~ 206 (540)
..++++++.|++|++|+.... ....+|...|.+++|+|++.+|++|+.|++|++||+.+++.+..+.+|.
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 456788899999999997642 1235699999999999999999999999999999999999999999999
Q ss_pred cceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEec---cccCCceeEEEECCCC----------CEEEEecCCCcEE
Q psy18231 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW---REHASKVTCVKFNEDS----------SVVISGSQDNTVM 273 (540)
Q Consensus 207 ~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~----------~~l~s~~~dg~i~ 273 (540)
..|.+++|+|++++|++++.|++|++||+... ..... ..|...|.+++|+|++ .+|++++.||.|+
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 99999999999999999999999999999743 33333 3789999999999986 7899999999999
Q ss_pred EEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecc
Q psy18231 274 MWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFL 353 (540)
Q Consensus 274 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (540)
+||... +
T Consensus 198 iwd~~~-~------------------------------------------------------------------------ 204 (343)
T 2xzm_R 198 VWNTNF-Q------------------------------------------------------------------------ 204 (343)
T ss_dssp EEETTT-E------------------------------------------------------------------------
T ss_pred EEcCCC-c------------------------------------------------------------------------
Confidence 999321 1
Q ss_pred cceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCC-CCceEEee-eCCceEEEEEecCCc
Q psy18231 354 GSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIR-TGNLVTDY-VGEPIVDACFTRDCQ 429 (540)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~-~~~~~~~~-~~~~i~~~~~sp~~~ 429 (540)
....+.+|...|.+++|+| ++|++++.||.|++||+. .......+ .++.|.+++|+|++.
T Consensus 205 ----------------~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~ 268 (343)
T 2xzm_R 205 ----------------IRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQ 268 (343)
T ss_dssp ----------------EEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSC
T ss_pred ----------------eeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCC
Confidence 0114557889999999998 789999999999999994 44444444 357899999999998
Q ss_pred EEEeecCCCeEEEEeccccchhh--hhc-----------cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCc
Q psy18231 430 CILTCSTDECLRLFDKATGELLE--EYK-----------GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS 493 (540)
Q Consensus 430 ~l~~~~~dg~i~i~d~~~~~~~~--~~~-----------~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~ 493 (540)
+++++ .|+.|++||+.+++... .+. +|...+.++ +|+|+|++|++|+.||.|++|++.++.
T Consensus 269 ~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 269 WVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSL--AWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp EEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEE--EECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred EEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEE--EECCCCCeEEEecCCceEEEEEEEccC
Confidence 88755 57889999998776543 332 566777666 899999999999999999999987653
No 56
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.3e-39 Score=340.71 Aligned_cols=286 Identities=18% Similarity=0.245 Sum_probs=260.7
Q ss_pred eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC
Q psy18231 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 238 (540)
...+|.+.|++++|+|++++||+++.||.|+|||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.++
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccC
Q psy18231 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNG 318 (540)
Q Consensus 239 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
+.+..+.+|.+.|.+++|+|++++|++++.||.|++||+.++..
T Consensus 88 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~------------------------------------ 131 (814)
T 3mkq_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA------------------------------------ 131 (814)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE------------------------------------
T ss_pred cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce------------------------------------
Confidence 99999999999999999999999999999999999999976531
Q ss_pred ceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeEeee
Q psy18231 319 LLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILTAS 395 (540)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~ 395 (540)
....+.+|...|.+++|+| ..+++++
T Consensus 132 ---------------------------------------------------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 132 ---------------------------------------------------LEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp ---------------------------------------------------EEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred ---------------------------------------------------EEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 1114557888999999987 6899999
Q ss_pred CCCeEEEEeCCCCceEEeeeC---CceEEEEEec--CCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecC
Q psy18231 396 LDCRIRRYDIRTGNLVTDYVG---EPIVDACFTR--DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDS 470 (540)
Q Consensus 396 ~dg~i~iwd~~~~~~~~~~~~---~~i~~~~~sp--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~ 470 (540)
.||.|++||+.+++....+.. ..+.+++|+| ++++|++++.||.|++||+.+++.+..+.+|...+..+ +|+|
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~--~~~~ 238 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFA--VFHP 238 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEE--EECS
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEE--EEcC
Confidence 999999999998877666653 6799999999 99999999999999999999999999999999988887 8999
Q ss_pred CCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCc--EEEeecCCeeEEEEcccc
Q psy18231 471 KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNNVKLWTAEED 535 (540)
Q Consensus 471 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~--~l~s~~d~~i~iw~~~~~ 535 (540)
++++|++++.||.|++||+.+++.+..+. .|...+.+++|+|++. ++++++|+.+.+|++..+
T Consensus 239 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLN--VGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp SSSEEEEEETTSCEEEEETTTCSEEEEEC--CSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 99999999999999999999999999888 7889999999999987 455555888999998654
No 57
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-38 Score=337.15 Aligned_cols=364 Identities=8% Similarity=0.094 Sum_probs=245.9
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 239 (540)
..+|.+.|++++|+|++++||+|+.||+|+||+..+.+....+. |...|.+++|+| +++|++++.|++|++||+.+++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 45899999999999999999999999999999998887766654 788999999999 8899999999999999999999
Q ss_pred eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhh---HhhhhcCCceeEEEEeecccc--cc
Q psy18231 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN---EALKEARDSITSVHSLVKSTK--NH 314 (540)
Q Consensus 240 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~ 314 (540)
.+..+. |.+.|++++|+|++++|++|+.||+|++||+++++.......... .....+...+..+ .+.+. ..
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl---~~sp~~~~~ 166 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI---QWNPRDIGT 166 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE---EEETTEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE---EEccCCCCE
Confidence 988885 778999999999999999999999999999987653211110000 0112222233332 22221 12
Q ss_pred cccCceeeEEEeeeeccc---------------------------ccceeee----------eeccceeEEEeeccccee
Q psy18231 315 LSNGLLTKLVFAFRCKYL---------------------------NGLLSGV----------LMSTQHLMVLLDFLGSTQ 357 (540)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~----------~~~~~~~~~~~~~~~~~~ 357 (540)
+..+.....+ .|+.... ...+..+ ..+.++.+.+|+......
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 2222222222 2221110 0112222 223445556665532211
Q ss_pred ccc-------------------------cccccc----cc---c--------------hhhhhh----------------
Q psy18231 358 IGD-------------------------VTPISI----HN---S--------------CFQALK---------------- 375 (540)
Q Consensus 358 ~~~-------------------------~~~~~~----~~---~--------------~~~~~~---------------- 375 (540)
+.. +..+.. .. . .+..+.
T Consensus 246 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~ 325 (902)
T 2oaj_A 246 IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMK 325 (902)
T ss_dssp EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHH
T ss_pred EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhh
Confidence 100 000000 00 0 000000
Q ss_pred --------------cccccEEEEEecC------------CeeEeeeCCCeEEEEeCCCCceEEe-------e--eCCceE
Q psy18231 376 --------------EARDSITSVHVSD------------HEILTASLDCRIRRYDIRTGNLVTD-------Y--VGEPIV 420 (540)
Q Consensus 376 --------------~~~~~v~~l~~~~------------~~l~~~~~dg~i~iwd~~~~~~~~~-------~--~~~~i~ 420 (540)
.+...|.++.+.+ ..+++++.||.|++||+.++..... + +...|+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~ 405 (902)
T 2oaj_A 326 NYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLAT 405 (902)
T ss_dssp HHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEE
T ss_pred hhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCee
Confidence 1223344444321 2567777788888888876643322 0 012333
Q ss_pred ----------------------------------EEEEecCCcEEEeecCCCeEEEEeccccchhh--hh---------c
Q psy18231 421 ----------------------------------DACFTRDCQCILTCSTDECLRLFDKATGELLE--EY---------K 455 (540)
Q Consensus 421 ----------------------------------~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~--~~---------~ 455 (540)
+++|+|++++|++|+.|++|++||+.+++... .+ .
T Consensus 406 ~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~ 485 (902)
T 2oaj_A 406 TSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNK 485 (902)
T ss_dssp EEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTC
T ss_pred EEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCC
Confidence 44567899999999999999999998875321 11 1
Q ss_pred cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCc------------------------------------------
Q psy18231 456 GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS------------------------------------------ 493 (540)
Q Consensus 456 ~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~------------------------------------------ 493 (540)
+|...|.++ +|+||+++||+|+.||+|++||+.+++
T Consensus 486 ~h~~~V~sv--afspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (902)
T 2oaj_A 486 AKELAVDKI--SFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQ 563 (902)
T ss_dssp SSSCCEEEE--EEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSE
T ss_pred CCCCceeEE--EecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCC
Confidence 788888888 899999999999999999999998763
Q ss_pred ---ceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 494 ---QISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 494 ---~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
++..+. +|.+.|++++||||| +||+|+ |++|+|||+++.
T Consensus 564 g~~~~~~l~--~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 564 GFMPSTAVH--ANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp EEEEEEEEC--CCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred ccceeEEEE--cCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence 244555 799999999999999 999999 999999998763
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-40 Score=322.48 Aligned_cols=279 Identities=15% Similarity=0.257 Sum_probs=231.0
Q ss_pred eeeecCeEEEEeCC-CCCEEEEeeCCCcEEEEcCCC---Ce---eEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEE
Q psy18231 161 LFVLSGLMHTRFPV-DGSYCLTCGSDKKIKLWNPYR---NL---LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILW 233 (540)
Q Consensus 161 ~~h~~~v~~v~~sp-dg~~lat~~~dg~i~iwd~~~---~~---~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iw 233 (540)
.+|.+.|++++|+| ++++|++|+.||+|+|||+.+ +. ....+ +|...|++++|+|++++|++++.||+|++|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 45889999999999 999999999999999999876 33 23333 499999999999999999999999999999
Q ss_pred EcC---CCceeEeccc------------cCCceeEEE--ECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhh
Q psy18231 234 EVT---TGQPVRRWRE------------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKE 296 (540)
Q Consensus 234 d~~---~~~~~~~~~~------------h~~~v~~~~--~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 296 (540)
|++ +++.+..+.. +...+.++. +++++.+|++++.||.|++||+++++.
T Consensus 139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-------------- 204 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER-------------- 204 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE--------------
T ss_pred EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee--------------
Confidence 995 5655443332 455667776 567899999999999999999988652
Q ss_pred cCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhc
Q psy18231 297 ARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKE 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (540)
+..+..
T Consensus 205 --------------------------------------------------------------------------~~~~~~ 210 (437)
T 3gre_A 205 --------------------------------------------------------------------------LQIIEN 210 (437)
T ss_dssp --------------------------------------------------------------------------EEEEEC
T ss_pred --------------------------------------------------------------------------eEEEcc
Confidence 112333
Q ss_pred --ccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeee-C--CceEEEEEe----cCCcEEEeecCCCeEEEEec
Q psy18231 377 --ARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYV-G--EPIVDACFT----RDCQCILTCSTDECLRLFDK 445 (540)
Q Consensus 377 --~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~-~--~~i~~~~~s----p~~~~l~~~~~dg~i~i~d~ 445 (540)
|...|.+++|+| .++++++.||.|++||+++++++..+. . .+|.+++|+ |++++|++++.||.|++||+
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 788999999998 889999999999999999999988775 3 479999665 56889999999999999999
Q ss_pred cccchhhhhcc--------------------------CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEE
Q psy18231 446 ATGELLEEYKG--------------------------HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 446 ~~~~~~~~~~~--------------------------~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 499 (540)
++++.+..+.+ |...|.++ +|+ ++++|++|+.||.|++||+.+++....+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l--~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 291 VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI--SVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE--EEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE--EEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 98887665554 44456666 677 77899999999999999999998887776
Q ss_pred ec-----------------------------------ccceeeeEEEEcCC--CcEEEeec-CCeeEEEE
Q psy18231 500 HS-----------------------------------VGKAVVNSLCSHPT--RKHIMSAC-GNNVKLWT 531 (540)
Q Consensus 500 ~~-----------------------------------~~~~~v~~l~~s~d--~~~l~s~~-d~~i~iw~ 531 (540)
.. .|...|++++|+++ +.+|++++ ||.|+||+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 368 SPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 21 18899999999998 88999999 99999995
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.2e-39 Score=313.78 Aligned_cols=276 Identities=15% Similarity=0.233 Sum_probs=237.6
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeec-CCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEecc
Q psy18231 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGG-HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR 245 (540)
Q Consensus 167 v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (540)
+.++.|++ ..+++++.|+.|++||+.+++....+.. |...|++++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA 173 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec
Confidence 45566665 4577888999999999999998887765 88999999999999999999999999999999999999999
Q ss_pred ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEE
Q psy18231 246 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVF 325 (540)
Q Consensus 246 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (540)
+|...|.+++| ++++|++++.||.|++||++....
T Consensus 174 ~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~------------------------------------------- 208 (401)
T 4aez_A 174 GHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH------------------------------------------- 208 (401)
T ss_dssp CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC-------------------------------------------
T ss_pred CCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc-------------------------------------------
Confidence 99999999999 467999999999999999985431
Q ss_pred eeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEE
Q psy18231 326 AFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRY 403 (540)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iw 403 (540)
....+.+|...|.+++|+| ..+++++.||.|++|
T Consensus 209 --------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw 244 (401)
T 4aez_A 209 --------------------------------------------QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIW 244 (401)
T ss_dssp --------------------------------------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred --------------------------------------------eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEc
Confidence 0114557889999999998 789999999999999
Q ss_pred eCCCCceEEeeeC--CceEEEEEecCCc-EEEeec--CCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEE-
Q psy18231 404 DIRTGNLVTDYVG--EPIVDACFTRDCQ-CILTCS--TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477 (540)
Q Consensus 404 d~~~~~~~~~~~~--~~i~~~~~sp~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s- 477 (540)
|+++++.+..+.. ..|.+++|+|++. ++++++ .|+.|++||+.+++.+..+. +...+..+ +|+|++++|++
T Consensus 245 d~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~--~~s~~~~~l~~~ 321 (401)
T 4aez_A 245 DARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSL--IWSPHSKEIMST 321 (401)
T ss_dssp ETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEE--EECSSSSEEEEE
T ss_pred cCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEE--EECCCCCeEEEE
Confidence 9999998887754 6899999999765 555544 79999999999999888886 45567666 89999999999
Q ss_pred -eeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEccccc
Q psy18231 478 -GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 478 -~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~~ 536 (540)
|+.||.|++||+.+++........+|...|.+++|+|++++|++++ ||.|++|++.++.
T Consensus 322 ~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 322 HGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp ECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred eecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 5589999999999977666554448999999999999999999999 9999999998764
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.4e-39 Score=304.25 Aligned_cols=282 Identities=15% Similarity=0.173 Sum_probs=242.9
Q ss_pred eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCce
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP 240 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 240 (540)
..|.++|.+++|+|||++++++..++.+.+|+...........+|...|++++|+|++++|++++ ||.|++||+.+++.
T Consensus 6 ~~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~ 84 (337)
T 1gxr_A 6 AMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN 84 (337)
T ss_dssp EEEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC
T ss_pred cccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc
Confidence 35778999999999999999888888787887766655555567999999999999999999999 99999999988754
Q ss_pred eE---ecc--ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccc
Q psy18231 241 VR---RWR--EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHL 315 (540)
Q Consensus 241 ~~---~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (540)
.. .+. .|...|.+++|+|++++|++++.||.|++||+++++...
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~------------------------------- 133 (337)
T 1gxr_A 85 KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRI------------------------------- 133 (337)
T ss_dssp CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EE-------------------------------
T ss_pred eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcce-------------------------------
Confidence 33 222 789999999999999999999999999999998765211
Q ss_pred ccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEe
Q psy18231 316 SNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILT 393 (540)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~ 393 (540)
...+..|...|.+++|+| +.+++
T Consensus 134 -------------------------------------------------------~~~~~~~~~~i~~~~~~~~~~~l~~ 158 (337)
T 1gxr_A 134 -------------------------------------------------------KAELTSSAPACYALAISPDSKVCFS 158 (337)
T ss_dssp -------------------------------------------------------EEEEECSSSCEEEEEECTTSSEEEE
T ss_pred -------------------------------------------------------eeecccCCCceEEEEECCCCCEEEE
Confidence 113456788899999998 78999
Q ss_pred eeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCC
Q psy18231 394 ASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSK 471 (540)
Q Consensus 394 ~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~ 471 (540)
++.||.|++||+++++.+..+.. ..+.+++|+|++++|++++.||.|++||+++++.+..+. +...+..+ +|+|+
T Consensus 159 ~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~--~~s~~ 235 (337)
T 1gxr_A 159 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSL--GYCPT 235 (337)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEE--EECTT
T ss_pred EeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEE--EECCC
Confidence 99999999999999998888864 579999999999999999999999999999998877764 56667666 89999
Q ss_pred CCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 472 DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 472 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
+++|++++.|+.|++||+.+++.. .+. .|...|.+++|+|++++|++++ ||.|++|+++++
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~~~-~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPDKY-QLH--LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSCEE-EEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEcCCCcEEEEECCCCCeE-EEc--CCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 999999999999999999887654 444 7999999999999999999999 999999999765
No 61
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.3e-39 Score=304.59 Aligned_cols=282 Identities=11% Similarity=0.070 Sum_probs=238.7
Q ss_pred eeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe---eEEEeecCCcceeEEEEeeCCC-eEEEeeCCCeEEEEEc-C
Q psy18231 162 FVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL---LLKTYGGHAHEVNDATAACDSS-QIASGASDKSVILWEV-T 236 (540)
Q Consensus 162 ~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~-~ 236 (540)
.|.+.|++++|+|++++|++++.||.|++||+.+++ ....+.+|...|.+++|+|+++ +|++++.||.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 689999999999999999999999999999998876 3455668999999999999999 9999999999999999 7
Q ss_pred CCceeEeccc--cCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccc
Q psy18231 237 TGQPVRRWRE--HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNH 314 (540)
Q Consensus 237 ~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (540)
+++. ..+.+ |...|.+++|+| +++|++++.||.|++||+++.......
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~---------------------------- 138 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIA---------------------------- 138 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEE----------------------------
T ss_pred CCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccc----------------------------
Confidence 7765 66778 999999999999 999999999999999998762100000
Q ss_pred cccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEee
Q psy18231 315 LSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTA 394 (540)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~ 394 (540)
.....+..+. |...|.+++|+++.++++
T Consensus 139 ---------------------------------------------------~~~~~~~~~~-~~~~v~~~~~~~~~l~~~ 166 (342)
T 1yfq_A 139 ---------------------------------------------------VKNLNSNNTK-VKNKIFTMDTNSSRLIVG 166 (342)
T ss_dssp ---------------------------------------------------EEESCSSSSS-SCCCEEEEEECSSEEEEE
T ss_pred ---------------------------------------------------ccCCeeeEEe-eCCceEEEEecCCcEEEE
Confidence 0000111222 778999999999779999
Q ss_pred eCCCeEEEEeCCC-CceE--Eee--eCCceEEEEEec-CCcEEEeecCCCeEEEEecccc------chhhhhccCcC---
Q psy18231 395 SLDCRIRRYDIRT-GNLV--TDY--VGEPIVDACFTR-DCQCILTCSTDECLRLFDKATG------ELLEEYKGHKS--- 459 (540)
Q Consensus 395 ~~dg~i~iwd~~~-~~~~--~~~--~~~~i~~~~~sp-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~--- 459 (540)
+.|+.|++||+++ +... ... ....+.+++|+| +++++++++.||.|++||+... +....+..|..
T Consensus 167 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1yfq_A 167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246 (342)
T ss_dssp ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT
T ss_pred eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccc
Confidence 9999999999998 5432 122 236899999999 9999999999999999999887 77778888865
Q ss_pred ------CcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEeccc-ceeeeEEEEcCCCcEEEeec-CCe-eEEE
Q psy18231 460 ------GDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSAC-GNN-VKLW 530 (540)
Q Consensus 460 ------~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~s~d~~~l~s~~-d~~-i~iw 530 (540)
.+..+ +|+|++++|++++.||.|++||+.+++.+..+. .| ...|.+++ |++++|++++ ||. .+.|
T Consensus 247 ~~~~~~~i~~~--~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~ 320 (342)
T 1yfq_A 247 DTNLAYPVNSI--EFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA--KFNEDSVVKIA--CSDNILCLATSDDTFKTNA 320 (342)
T ss_dssp CCSSCCCEEEE--EECTTTCCEEEEETTSCEEEEETTTTEEEEECC--CCSSSEEEEEE--ECSSEEEEEEECTHHHHCS
T ss_pred ccccceeEEEE--EEcCCCCEEEEecCCceEEEEcCccHhHhhhhh--cccCCCceEec--CCCCeEEEEecCCcccccc
Confidence 67766 899999999999999999999999999998887 77 99999999 9999999999 998 4444
Q ss_pred E
Q psy18231 531 T 531 (540)
Q Consensus 531 ~ 531 (540)
.
T Consensus 321 ~ 321 (342)
T 1yfq_A 321 A 321 (342)
T ss_dssp S
T ss_pred c
Confidence 4
No 62
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7e-39 Score=297.70 Aligned_cols=243 Identities=16% Similarity=0.216 Sum_probs=204.9
Q ss_pred eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCC--CeeEEEeecCCcceeEEEEee--CCCeEEEeeCCCeEEEEEcC
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYR--NLLLKTYGGHAHEVNDATAAC--DSSQIASGASDKSVILWEVT 236 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~sp--~~~~l~s~s~dg~i~iwd~~ 236 (540)
.+|.+.|.+++|+|+|++||+|+.|++|+|||+.+ .+.+.++.+|.+.|++++|+| ++++|++|+.|++|++||++
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 46999999999999999999999999999999874 467889999999999999986 48999999999999999998
Q ss_pred CCc--eeEeccccCCceeEEEECCC--CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccc
Q psy18231 237 TGQ--PVRRWREHASKVTCVKFNED--SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTK 312 (540)
Q Consensus 237 ~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
+++ .+..+.+|...|.+++|+|+ +.+|++++.||+|++||+++......
T Consensus 86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~--------------------------- 138 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP--------------------------- 138 (297)
T ss_dssp SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC---------------------------
T ss_pred CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee---------------------------
Confidence 874 55667889999999999997 88999999999999999986531000
Q ss_pred cccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC----
Q psy18231 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---- 388 (540)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---- 388 (540)
..+.+|...|.+++|+|
T Consensus 139 -----------------------------------------------------------~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 139 -----------------------------------------------------------IIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp -----------------------------------------------------------EEEECCSSCEEEEEECCCC--
T ss_pred -----------------------------------------------------------eeeecccCccceEeecCCccc
Confidence 13446777888888877
Q ss_pred -----------CeeEeeeCCCeEEEEeCCCCc----eEEeeeC--CceEEEEEecCC---cEEEeecCCCeEEEEecccc
Q psy18231 389 -----------HEILTASLDCRIRRYDIRTGN----LVTDYVG--EPIVDACFTRDC---QCILTCSTDECLRLFDKATG 448 (540)
Q Consensus 389 -----------~~l~~~~~dg~i~iwd~~~~~----~~~~~~~--~~i~~~~~sp~~---~~l~~~~~dg~i~i~d~~~~ 448 (540)
.+|++++.|+.|++||+++++ ....+.+ ..|.+++|+|++ ++|++++.|++|++||+.+.
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 379999999999999998766 4455654 579999999984 89999999999999998764
Q ss_pred ch---hhhh--ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecC
Q psy18231 449 EL---LEEY--KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491 (540)
Q Consensus 449 ~~---~~~~--~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~ 491 (540)
.. ...+ ..|...+..+ +|+|++++|++++.||+|++|+...
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~--~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 240 QGPWKKTLLKEEKFPDVLWRA--SWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp TSCCEEEESSSSCCSSCEEEE--EECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCccceeeeecccCCCcEEEE--EECCCCCEEEEEcCCCcEEEEEECC
Confidence 31 1122 4667777766 8999999999999999999999763
No 63
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2e-38 Score=297.39 Aligned_cols=271 Identities=23% Similarity=0.371 Sum_probs=234.8
Q ss_pred ceeccccchhhhhhcccccceeeeecccccce---eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeec
Q psy18231 128 LLFSLPRTITRILYELPKEWSIRVYRPLTVNR---ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGG 204 (540)
Q Consensus 128 ~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~ 204 (540)
+.|+++ ...+++++.++.|++|+..+... ...|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+
T Consensus 29 ~~~s~~---~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 105 (312)
T 4ery_A 29 VKFSPN---GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG 105 (312)
T ss_dssp EEECTT---SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEECCC---CCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC
Confidence 445554 34566778999999999876542 345899999999999999999999999999999999999999999
Q ss_pred CCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCC
Q psy18231 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP 284 (540)
Q Consensus 205 h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 284 (540)
|...|.+++|+|++++|++++.|++|++||+++++.+..+..|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 106 ~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-- 183 (312)
T 4ery_A 106 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-- 183 (312)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE--
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987651
Q ss_pred cchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccc
Q psy18231 285 IQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPI 364 (540)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (540)
..
T Consensus 184 ~~------------------------------------------------------------------------------ 185 (312)
T 4ery_A 184 LK------------------------------------------------------------------------------ 185 (312)
T ss_dssp EE------------------------------------------------------------------------------
T ss_pred ee------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeCC--c---eEEEEEecCCcEEEeecCC
Q psy18231 365 SIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVGE--P---IVDACFTRDCQCILTCSTD 437 (540)
Q Consensus 365 ~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~---i~~~~~sp~~~~l~~~~~d 437 (540)
.....+...+..++|+| +++++++.|+.|++||+++++.+..+.++ . +......+++.+|++|+.|
T Consensus 186 -------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 258 (312)
T 4ery_A 186 -------TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 258 (312)
T ss_dssp -------EECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT
T ss_pred -------EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC
Confidence 01123456788899998 78999999999999999999988888653 1 2333334688999999999
Q ss_pred CeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEee--CCCcEEEEEec
Q psy18231 438 ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGS--SDGKIYKWQLV 490 (540)
Q Consensus 438 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s--~dg~i~iwd~~ 490 (540)
|.|++||+.+++.+..+.+|...+..+ +|+|++++|++++ .|++|++|+..
T Consensus 259 g~i~vwd~~~~~~~~~~~~h~~~v~~~--~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 259 NLVYIWNLQTKEIVQKLQGHTDVVIST--ACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEE--EECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CEEEEEECCCchhhhhhhccCCcEEEE--eecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999999999999988877 8999999999987 69999999853
No 64
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-38 Score=307.54 Aligned_cols=279 Identities=22% Similarity=0.318 Sum_probs=226.6
Q ss_pred Ccceeccccchhhhhhcccccceeeeecccccceee---ee------------------ecCeEEEEeCCCCCEEEEeeC
Q psy18231 126 HPLLFSLPRTITRILYELPKEWSIRVYRPLTVNREL---FV------------------LSGLMHTRFPVDGSYCLTCGS 184 (540)
Q Consensus 126 ~~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~h------------------~~~v~~v~~spdg~~lat~~~ 184 (540)
..+.|+++.. .++.+. +..+++|+..+..... .| ...|.+++|+|||++|++|+.
T Consensus 68 ~~v~fspdg~---~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 68 CCVKFSNDGE---YLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 143 (393)
T ss_dssp CEEEECTTSS---EEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCC---EEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC
Confidence 3455666532 333433 5788999887654321 12 124999999999999999999
Q ss_pred CCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECC-CCCEE
Q psy18231 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE-DSSVV 263 (540)
Q Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l 263 (540)
|++|++||+.+++.+..+.+|...|++++|+|++++|++++.|++|++||+++++....+. +...+.+++|+| ++++|
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEE
T ss_pred CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEE
Confidence 9999999999999999999999999999999999999999999999999999998877764 667899999999 89999
Q ss_pred EEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeecc
Q psy18231 264 ISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMST 343 (540)
Q Consensus 264 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (540)
++++.||.|++||++++......
T Consensus 223 ~~~s~d~~v~iwd~~~~~~~~~~--------------------------------------------------------- 245 (393)
T 1erj_A 223 AAGSLDRAVRVWDSETGFLVERL--------------------------------------------------------- 245 (393)
T ss_dssp EEEETTSCEEEEETTTCCEEEEE---------------------------------------------------------
T ss_pred EEEcCCCcEEEEECCCCcEEEee---------------------------------------------------------
Confidence 99999999999999876520000
Q ss_pred ceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCc------------
Q psy18231 344 QHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGN------------ 409 (540)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~------------ 409 (540)
........+|...|.+++|+| .++++++.|+.|++||+++..
T Consensus 246 ------------------------~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~ 301 (393)
T 1erj_A 246 ------------------------DSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 301 (393)
T ss_dssp ------------------------C------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------C
T ss_pred ------------------------cccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCc
Confidence 000012357889999999998 789999999999999998643
Q ss_pred eEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEec------CCCCeEEEeeCC
Q psy18231 410 LVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLD------SKDSQIFCGSSD 481 (540)
Q Consensus 410 ~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s------~~~~~l~s~s~d 481 (540)
+...+.+ ..|.+++|+|++++|++|+.|+.|++||..+++.+..+.+|...|..+ +|+ |++++|++|+.|
T Consensus 302 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v--~~~~~~~~~p~~~~l~sgs~D 379 (393)
T 1erj_A 302 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV--AVANGSSLGPEYNVFATGSGD 379 (393)
T ss_dssp EEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE--EECSSCTTCTTCEEEEEEETT
T ss_pred ceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEE--EecCCcCcCCCCCEEEEECCC
Confidence 3344444 469999999999999999999999999999999999999999999888 554 478899999999
Q ss_pred CcEEEEEecCC
Q psy18231 482 GKIYKWQLVDS 492 (540)
Q Consensus 482 g~i~iwd~~~~ 492 (540)
|+|++|++...
T Consensus 380 g~i~iW~~~~~ 390 (393)
T 1erj_A 380 CKARIWKYKKI 390 (393)
T ss_dssp SEEEEEEEEEC
T ss_pred CcEEECccccc
Confidence 99999998654
No 65
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.5e-39 Score=296.83 Aligned_cols=247 Identities=17% Similarity=0.197 Sum_probs=207.7
Q ss_pred EEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC--CceeEeccccCCceeEEEECC--CCCEEEEecCCCcEEEE
Q psy18231 200 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT--GQPVRRWREHASKVTCVKFNE--DSSVVISGSQDNTVMMW 275 (540)
Q Consensus 200 ~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iw 275 (540)
..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.. .+.+..+.+|.+.|.+++|++ ++++|++++.||+|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45678999999999999999999999999999999975 367788999999999999986 38999999999999999
Q ss_pred EecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccc
Q psy18231 276 DVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGS 355 (540)
Q Consensus 276 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (540)
|+++++....
T Consensus 83 d~~~~~~~~~---------------------------------------------------------------------- 92 (297)
T 2pm7_B 83 KEENGRWSQI---------------------------------------------------------------------- 92 (297)
T ss_dssp EBSSSCBCCC----------------------------------------------------------------------
T ss_pred EcCCCceEEE----------------------------------------------------------------------
Confidence 9987642111
Q ss_pred eecccccccccccchhhhhhcccccEEEEEecC----CeeEeeeCCCeEEEEeCCCCce--EEeee--CCceEEEEEecC
Q psy18231 356 TQIGDVTPISIHNSCFQALKEARDSITSVHVSD----HEILTASLDCRIRRYDIRTGNL--VTDYV--GEPIVDACFTRD 427 (540)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~l~~~~~dg~i~iwd~~~~~~--~~~~~--~~~i~~~~~sp~ 427 (540)
..+..|...|.+++|+| .+|++++.|+.|++||++++.. ...+. ...|.+++|+|+
T Consensus 93 ----------------~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 93 ----------------AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp ----------------EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred ----------------EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 13456888999999987 4799999999999999987632 23333 357999999997
Q ss_pred -------------CcEEEeecCCCeEEEEeccccc----hhhhhccCcCCcceEEEEecCCC---CeEEEeeCCCcEEEE
Q psy18231 428 -------------CQCILTCSTDECLRLFDKATGE----LLEEYKGHKSGDFRIECCLDSKD---SQIFCGSSDGKIYKW 487 (540)
Q Consensus 428 -------------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~s~~~---~~l~s~s~dg~i~iw 487 (540)
+++|++|+.|+.|++||+++++ ....+.+|...|..+ +|+|++ .+|++++.|++|++|
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v--~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV--AWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE--EECCCCSSSEEEEEEETTSCEEEE
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEE--EECCCCCCceEEEEEECCCcEEEE
Confidence 5799999999999999998765 566788999999888 899985 789999999999999
Q ss_pred EecCCcc--e-eEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEccc
Q psy18231 488 QLVDSSQ--I-STLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEE 534 (540)
Q Consensus 488 d~~~~~~--~-~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~ 534 (540)
|+.+... . ..+....|...|.+++|+|++++|++++ |++|++|+...
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9987532 1 2221136788999999999999999999 99999999863
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-38 Score=354.16 Aligned_cols=358 Identities=19% Similarity=0.266 Sum_probs=279.6
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 239 (540)
..+|.+.|++++|+|||++||+|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.|++|++||+.+++
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK 690 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEeccccCCceeEEEECC--CCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccc-ccc
Q psy18231 240 PVRRWREHASKVTCVKFNE--DSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKN-HLS 316 (540)
Q Consensus 240 ~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 316 (540)
.+..+.+|...|.+++|+| ++.++++++.||.|++||+++++... .+..+...+. .+.+.+.+ .+.
T Consensus 691 ~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~--------~~~~h~~~v~---~~~~sp~~~~l~ 759 (1249)
T 3sfz_A 691 LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN--------TMFGHTNSVN---HCRFSPDDELLA 759 (1249)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE--------EECCCSSCEE---EEEECSSTTEEE
T ss_pred eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh--------eecCCCCCEE---EEEEecCCCEEE
Confidence 9999999999999999999 55689999999999999998876311 1122333333 33333332 333
Q ss_pred cCceeeEEEeeeecccc----------------------cceeeeeeccceeEEEeecccceecccccccccccchhhhh
Q psy18231 317 NGLLTKLVFAFRCKYLN----------------------GLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL 374 (540)
Q Consensus 317 ~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (540)
.+.....+..|+..... ..+..+.++.++...+....+...+++....... ....
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~---~~~~ 836 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL---AEIH 836 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEE---EEEE
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCce---eEEc
Confidence 34444444444432211 1222333444444444444444444443322111 1123
Q ss_pred hcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccch
Q psy18231 375 KEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGEL 450 (540)
Q Consensus 375 ~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 450 (540)
.+|...|.+++|+| ..+++++.||.|++||+.++..+..+.+ ..|.+++|+|++++|++++.||.|++||+.+...
T Consensus 837 ~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~ 916 (1249)
T 3sfz_A 837 TGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCK 916 (1249)
T ss_dssp CSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHS
T ss_pred CCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccce
Confidence 47889999999999 8899999999999999999999888876 5799999999999999999999999999764321
Q ss_pred hhh-----------------------------h--------ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCc
Q psy18231 451 LEE-----------------------------Y--------KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS 493 (540)
Q Consensus 451 ~~~-----------------------------~--------~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~ 493 (540)
... . ..+...+.++ +++|+++++++|+.||.|++||+.+++
T Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~sp~g~~l~~g~~~g~i~i~d~~~~~ 994 (1249)
T 3sfz_A 917 NSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCC--CLSPHLEYVAFGDEDGAIKIIELPNNR 994 (1249)
T ss_dssp CCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEE--EECTTSSEEEEEETTSCCEEEETTTTS
T ss_pred eeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEE--EEcCCCCEEEEEcCCCCEEEEEcCCCc
Confidence 100 0 0122334444 899999999999999999999999999
Q ss_pred ceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 494 QISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 494 ~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
....+. +|...|++++|+|++++|++++ |+.|++|++.++
T Consensus 995 ~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 995 VFSSGV--GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp CEEECC--CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTT
T ss_pred eeeecc--cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 988887 8999999999999999999999 999999998765
No 67
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.4e-39 Score=309.40 Aligned_cols=279 Identities=12% Similarity=0.126 Sum_probs=218.8
Q ss_pred cCeEEEEeCCCCCEEEEeeCCC-------cEEEEcCCCCee----------EEEeecCCcceeEEEEeeCCCeEEEe---
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDK-------KIKLWNPYRNLL----------LKTYGGHAHEVNDATAACDSSQIASG--- 224 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg-------~i~iwd~~~~~~----------~~~~~~h~~~v~~l~~sp~~~~l~s~--- 224 (540)
-||++++|+|||++|++|+.+. .|++|++..+.. ...+.+|...|.+++++ ++.+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 5899999999999999987543 599999865421 23456788888887664 5666665
Q ss_pred --------eCCCeEEEEEcCCCceeEe---------ccccCCceeEEEECCCCCEEEE--ecCCCcEEEEEecCCCCCCc
Q psy18231 225 --------ASDKSVILWEVTTGQPVRR---------WREHASKVTCVKFNEDSSVVIS--GSQDNTVMMWDVKSRSHHPI 285 (540)
Q Consensus 225 --------s~dg~i~iwd~~~~~~~~~---------~~~h~~~v~~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~ 285 (540)
+.|+++++|++........ ...+...+.+++|+|||+++++ ++.|++|++||+++++. .
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~--~ 170 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE--K 170 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE--E
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE--E
Confidence 4578899999876542211 1234566899999999998764 45789999999987652 0
Q ss_pred chhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccc
Q psy18231 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS 365 (540)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (540)
T Consensus 171 -------------------------------------------------------------------------------- 170 (365)
T 4h5i_A 171 -------------------------------------------------------------------------------- 170 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeee----CCceEEEEEecCCcEEEeecCCC-
Q psy18231 366 IHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYV----GEPIVDACFTRDCQCILTCSTDE- 438 (540)
Q Consensus 366 ~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~i~~~~~sp~~~~l~~~~~dg- 438 (540)
..+ .|...|.+++|+| +++++++ ++.+.+|+..+++.+.... ...+.+++|+|+++++++++.|+
T Consensus 171 ------~~~-~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~ 242 (365)
T 4h5i_A 171 ------FEI-ETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG 242 (365)
T ss_dssp ------EEE-ECSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS
T ss_pred ------EEe-CCCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc
Confidence 012 3667899999999 6676766 5557777777776654332 24699999999999999999887
Q ss_pred ---eEEEEeccccch----hhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEE
Q psy18231 439 ---CLRLFDKATGEL----LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511 (540)
Q Consensus 439 ---~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 511 (540)
.+++||+..... ...+.+|...|+++ +|+|||++||+|+.|++|+|||+.+++++..+.. +|...|++++
T Consensus 243 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~--~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~-gH~~~V~~v~ 319 (365)
T 4h5i_A 243 KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSM--DVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQ-AHSFAITEVT 319 (365)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEE--EECTTSCEEEEEETTSCEEEEETTTTEEEEEETT-SSSSCEEEEE
T ss_pred ceeEEeecccccceecceeeeeecCCCCCeEeE--EECCCCCceEEEcCCCEEEEEECCCCcEEEEecC-cccCCEEEEE
Confidence 688899876543 35677888888887 8999999999999999999999999999887632 8999999999
Q ss_pred EcCCCcEEEeec-CCeeEEEEcccccCC
Q psy18231 512 SHPTRKHIMSAC-GNNVKLWTAEEDYGQ 538 (540)
Q Consensus 512 ~s~d~~~l~s~~-d~~i~iw~~~~~~~~ 538 (540)
|||||++|++++ |++|+||+++..+..
T Consensus 320 fSpdg~~laS~S~D~tvrvw~ip~~~~~ 347 (365)
T 4h5i_A 320 ISPDSTYVASVSAANTIHIIKLPLNYAN 347 (365)
T ss_dssp ECTTSCEEEEEETTSEEEEEECCTTTTC
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCCcC
Confidence 999999999999 999999999877654
No 68
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8.3e-39 Score=314.36 Aligned_cols=274 Identities=25% Similarity=0.393 Sum_probs=241.6
Q ss_pred eeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCcee
Q psy18231 162 FVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPV 241 (540)
Q Consensus 162 ~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 241 (540)
.|...|.+++| ++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++| ++++|++|+.||+|++||+.+++.+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 46678999887 7899999999999999999999999999999999999999 7899999999999999999999999
Q ss_pred EeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCcee
Q psy18231 242 RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLT 321 (540)
Q Consensus 242 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (540)
..+.+|...|.+++|++ ..+++++.||.|++||++++.....
T Consensus 207 ~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~------------------------------------ 248 (435)
T 1p22_A 207 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITL------------------------------------ 248 (435)
T ss_dssp EEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEE------------------------------------
T ss_pred EEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCcee------------------------------------
Confidence 99999999999999974 5999999999999999987652100
Q ss_pred eEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEE
Q psy18231 322 KLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIR 401 (540)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~ 401 (540)
...+.+|...|.+++++++.+++++.||.|+
T Consensus 249 -------------------------------------------------~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 249 -------------------------------------------------RRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 279 (435)
T ss_dssp -------------------------------------------------EEEECCCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred -------------------------------------------------eeEecCCCCcEEEEEeCCCEEEEEeCCCeEE
Confidence 0145578899999999889999999999999
Q ss_pred EEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEee
Q psy18231 402 RYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGS 479 (540)
Q Consensus 402 iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s 479 (540)
+||+++++.+..+.+ ..+.++.+ +++++++|+.||.|++||+++++.+..+.+|...+.++ +| ++.+|++|+
T Consensus 280 vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~--~~--~~~~l~sg~ 353 (435)
T 1p22_A 280 VWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI--RF--DNKRIVSGA 353 (435)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE--EC--CSSEEEEEE
T ss_pred EEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEE--Ee--cCCEEEEEe
Confidence 999999999988876 46888888 57899999999999999999999999999999998877 55 788999999
Q ss_pred CCCcEEEEEecCCc---------ceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEccccc
Q psy18231 480 SDGKIYKWQLVDSS---------QISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 480 ~dg~i~iwd~~~~~---------~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~~ 536 (540)
.||.|++||+.+++ .+..+. +|.+.|.+++| ++.+|++++ ||+|++||+.++.
T Consensus 354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 354 YDGKIKVWDLVAALDPRAPAGTLCLRTLV--EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp TTSCEEEEEHHHHTSTTSCTTTTEEEEEC--CCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CCCcEEEEECCCCCCccccccchheeecc--CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 99999999998766 677777 89999999999 788999999 9999999998764
No 69
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.1e-38 Score=309.82 Aligned_cols=274 Identities=16% Similarity=0.289 Sum_probs=234.4
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEee--cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEe
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG--GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRR 243 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 243 (540)
.++.|+||++ ++||+|. |++|+|||..+++....+. +|...|++++|+|+|++|++|+.||+|+|||+++++.+..
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 4678999986 4787775 9999999999998877664 6778899999999999999999999999999999999999
Q ss_pred ccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeE
Q psy18231 244 WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKL 323 (540)
Q Consensus 244 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (540)
+.+|...+.+++++ +.+|++|+.|+.+++||......
T Consensus 185 ~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~----------------------------------------- 221 (420)
T 4gga_A 185 MTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH----------------------------------------- 221 (420)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC-----------------------------------------
T ss_pred EeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccce-----------------------------------------
Confidence 99999999998885 67999999999999999876541
Q ss_pred EEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEE
Q psy18231 324 VFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIR 401 (540)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~ 401 (540)
....+.+|...+..+.+++ ..+++++.|+.++
T Consensus 222 ----------------------------------------------~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 222 ----------------------------------------------HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp ----------------------------------------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ----------------------------------------------eeEEecccccceeeeeecCCCCeeeeeeccccce
Confidence 1114567889999999998 8899999999999
Q ss_pred EEeCCCCce----EEeee--CCceEEEEEecCCc-EEEe--ecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCC
Q psy18231 402 RYDIRTGNL----VTDYV--GEPIVDACFTRDCQ-CILT--CSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKD 472 (540)
Q Consensus 402 iwd~~~~~~----~~~~~--~~~i~~~~~sp~~~-~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~ 472 (540)
+||..+++. +.... ...|.+++|+|++. ++++ |+.|++|++||+.+++.+..+..|.. +..+ .|++++
T Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~-v~~~--~~~~~~ 332 (420)
T 4gga_A 256 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ-VCSI--LWSPHY 332 (420)
T ss_dssp EEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC-EEEE--EEETTT
T ss_pred EEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc-eeee--eecCCC
Confidence 999987753 22222 36799999999654 4444 56799999999999999888876654 4444 799999
Q ss_pred CeEEEee--CCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 473 SQIFCGS--SDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 473 ~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
+.+++++ .|+.|+|||+.+++++.++. +|.+.|++++|+|||++|+||+ |++|+|||+.+.
T Consensus 333 ~~lv~~sg~~d~~I~iwd~~~~~~v~~l~--gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 333 KELISGHGFAQNQLVIWKYPTMAKVAELK--GHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred CeEEEEEecCCCEEEEEECCCCcEEEEEc--CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9988765 79999999999999999998 9999999999999999999999 999999998653
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=308.17 Aligned_cols=299 Identities=22% Similarity=0.252 Sum_probs=244.9
Q ss_pred cceeeeecccccc---eeeeeecCeEEEEeCC-CCCEEEEeeCCCcEEEEcCCCCeeEEEee-------------cCCcc
Q psy18231 146 EWSIRVYRPLTVN---RELFVLSGLMHTRFPV-DGSYCLTCGSDKKIKLWNPYRNLLLKTYG-------------GHAHE 208 (540)
Q Consensus 146 ~~~i~~~~~~~~~---~~~~h~~~v~~v~~sp-dg~~lat~~~dg~i~iwd~~~~~~~~~~~-------------~h~~~ 208 (540)
+..+++|+..... ....|.+.|++++|+| ++++|++|+.||.|++||+.+++....+. +|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 4456667655432 2345999999999999 99999999999999999998876554443 59999
Q ss_pred eeEEEEee-CCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCC---CCEEEEecCCCcEEEEEecCCCCCC
Q psy18231 209 VNDATAAC-DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED---SSVVISGSQDNTVMMWDVKSRSHHP 284 (540)
Q Consensus 209 v~~l~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~ 284 (540)
|.+++|+| ++.+|++++.||.|++||+.+++....+. +...+.++.|++. +.++++++.||.|++||+++++.
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-- 178 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-- 178 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC--
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce--
Confidence 99999999 78899999999999999999998887775 7889999999984 45999999999999999987652
Q ss_pred cchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccc
Q psy18231 285 IQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPI 364 (540)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (540)
T Consensus 179 -------------------------------------------------------------------------------- 178 (408)
T 4a11_B 179 -------------------------------------------------------------------------------- 178 (408)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhhhhcccccEEEEEecC--C-eeEeeeCCCeEEEEeCCCCc-eEEee-----------------eCCceEEEE
Q psy18231 365 SIHNSCFQALKEARDSITSVHVSD--H-EILTASLDCRIRRYDIRTGN-LVTDY-----------------VGEPIVDAC 423 (540)
Q Consensus 365 ~~~~~~~~~~~~~~~~v~~l~~~~--~-~l~~~~~dg~i~iwd~~~~~-~~~~~-----------------~~~~i~~~~ 423 (540)
...+..|...|.+++|+| . ++++++.||.|++||++++. .+..+ +...|.+++
T Consensus 179 ------~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 179 ------SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp ------CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred ------eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 114557889999999999 3 58899999999999998765 23322 235799999
Q ss_pred EecCCcEEEeecCCCeEEEEeccccchhhhhccCcCC----cceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEE
Q psy18231 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG----DFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 424 ~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 499 (540)
|+|++++|++++.||.|++||+.+++....+..+... ..... .....+..+++++.|+.|++||+.+++++..+.
T Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 253 FTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFT-VSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCE-ECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeE-EecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 9999999999999999999999998776555433211 11111 223445567788889999999999999999998
Q ss_pred ecccceeeeEEEEcCCCcEEEeec-CCeeEEEEccccc
Q psy18231 500 HSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 500 ~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~~ 536 (540)
+|...|++++|+|++++|++++ ||.|++|+++++.
T Consensus 332 --~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 332 --GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp --CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred --cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 8999999999999999999999 9999999998753
No 71
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=295.52 Aligned_cols=273 Identities=16% Similarity=0.257 Sum_probs=229.9
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEee--cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEec
Q psy18231 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG--GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244 (540)
Q Consensus 167 v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (540)
.++|+||+++ +||+|. |++|+|||+.+++.+..+. +|...|++++|+|++++|++|+.||+|++||+++++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4679999986 777765 9999999999999888765 67788999999999999999999999999999999999999
Q ss_pred cccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEE
Q psy18231 245 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLV 324 (540)
Q Consensus 245 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (540)
.+|...+.++.+. +..+++++.++.+++|+......
T Consensus 106 ~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~------------------------------------------ 141 (318)
T 4ggc_A 106 TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH------------------------------------------ 141 (318)
T ss_dssp ECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC------------------------------------------
T ss_pred cCccceEEEeecC--CCEEEEEecCCceEeeecCCCce------------------------------------------
Confidence 9999998877664 67999999999999999876542
Q ss_pred EeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEE
Q psy18231 325 FAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRR 402 (540)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~i 402 (540)
....+.+|...+..+.+++ ..+++++.|+.|++
T Consensus 142 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 176 (318)
T 4ggc_A 142 ---------------------------------------------HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV 176 (318)
T ss_dssp ---------------------------------------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ---------------------------------------------eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeE
Confidence 1114557888899999988 88999999999999
Q ss_pred EeCCCCceEEe----e--eCCceEEEEEecCCcE---EEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCC
Q psy18231 403 YDIRTGNLVTD----Y--VGEPIVDACFTRDCQC---ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 473 (540)
Q Consensus 403 wd~~~~~~~~~----~--~~~~i~~~~~sp~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~ 473 (540)
||+++++.... . ....|.+++++|++.. +++++.++.|++||........... +...+..+ +|+++++
T Consensus 177 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~--~~~~~~~ 253 (318)
T 4ggc_A 177 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSI--LWSPHYK 253 (318)
T ss_dssp EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEE--EEETTTT
T ss_pred EECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeee--eeccccc
Confidence 99998764321 1 2367999999997653 3467789999999998877665544 44555555 7889999
Q ss_pred eEEEee--CCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 474 QIFCGS--SDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 474 ~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
.+++++ .|+.|++||+.+++++.++. +|.+.|++++|+||+++|+|++ |++|+|||+.+.
T Consensus 254 ~~~~~sg~~d~~i~iwd~~~~~~~~~l~--gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 254 ELISGHGFAQNQLVIWKYPTMAKVAELK--GHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred ceEEEEEcCCCEEEEEECCCCcEEEEEc--CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 877654 89999999999999999998 9999999999999999999999 999999999653
No 72
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=303.07 Aligned_cols=279 Identities=15% Similarity=0.191 Sum_probs=237.4
Q ss_pred eeeeecCeEEEEeCCC---CCEEEEeeCCCcEEEEcCCC-CeeE-EEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEE
Q psy18231 160 ELFVLSGLMHTRFPVD---GSYCLTCGSDKKIKLWNPYR-NLLL-KTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234 (540)
Q Consensus 160 ~~~h~~~v~~v~~spd---g~~lat~~~dg~i~iwd~~~-~~~~-~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd 234 (540)
...|.+.|++++|+|+ |++|++|+.||.|++||+.+ +..+ ..+.+|...|++++|+|++++|++++.||.|++||
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 3479999999999999 69999999999999999987 5554 77889999999999999999999999999999999
Q ss_pred cCCCceeEeccccCCceeEEEE--CCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccc
Q psy18231 235 VTTGQPVRRWREHASKVTCVKF--NEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTK 312 (540)
Q Consensus 235 ~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
+++++.+. +..|...|.+++| +|++++|++++.||.|++||+++++. ..
T Consensus 115 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~-------------------------- 165 (368)
T 3mmy_A 115 LSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP--MM-------------------------- 165 (368)
T ss_dssp TTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC--SE--------------------------
T ss_pred cCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE--EE--------------------------
Confidence 99988776 5579999999999 89999999999999999999987752 11
Q ss_pred cccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeE
Q psy18231 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEIL 392 (540)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~ 392 (540)
.+. ....+.++.+.+..++
T Consensus 166 ------------------------------------------------------------~~~-~~~~~~~~~~~~~~~~ 184 (368)
T 3mmy_A 166 ------------------------------------------------------------VLQ-LPERCYCADVIYPMAV 184 (368)
T ss_dssp ------------------------------------------------------------EEE-CSSCEEEEEEETTEEE
T ss_pred ------------------------------------------------------------EEe-cCCCceEEEecCCeeE
Confidence 111 1235677777788899
Q ss_pred eeeCCCeEEEEeCCCCceEEeee----CCceEEEEEecCCcE----EEeecCCCeEEEEecccc---chhhhhccCcC--
Q psy18231 393 TASLDCRIRRYDIRTGNLVTDYV----GEPIVDACFTRDCQC----ILTCSTDECLRLFDKATG---ELLEEYKGHKS-- 459 (540)
Q Consensus 393 ~~~~dg~i~iwd~~~~~~~~~~~----~~~i~~~~~sp~~~~----l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~-- 459 (540)
+++.++.+++|+++......... .+.+.++++.++... +++++.||.|++||+... +.+..+..|..
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG 264 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence 99999999999999775543332 356778888776655 999999999999999887 55667777765
Q ss_pred ----------CcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeE
Q psy18231 460 ----------GDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVK 528 (540)
Q Consensus 460 ----------~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~ 528 (540)
.+..+ +|+|++++|++++.||.|++||+.+++++..+. .|...|++++|+|++++|++++ |+..+
T Consensus 265 ~~~~~~~~~~~v~~~--~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGI--AFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE--QLDQPISACCFNHNGNIFAYASSYDWSK 340 (368)
T ss_dssp ---CCCEEECCEEEE--EECTTTCCEEEEETTSCEEEEETTTTEEEEECC--CCSSCEEEEEECTTSSCEEEEECCCSTT
T ss_pred ccccccccccceEEE--EEecCCCEEEEEccCCeEEEEECCCCcEEEEec--CCCCCceEEEECCCCCeEEEEecccccc
Confidence 57666 899999999999999999999999999999888 8999999999999999999998 87555
Q ss_pred EEEc
Q psy18231 529 LWTA 532 (540)
Q Consensus 529 iw~~ 532 (540)
.|++
T Consensus 341 ~~~~ 344 (368)
T 3mmy_A 341 GHEF 344 (368)
T ss_dssp CGGG
T ss_pred cccc
Confidence 5443
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.1e-38 Score=295.96 Aligned_cols=244 Identities=15% Similarity=0.216 Sum_probs=198.3
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe--eEEEeecCCcceeEEEEee--CCCeEEEeeCCCeEEEEEc
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL--LLKTYGGHAHEVNDATAAC--DSSQIASGASDKSVILWEV 235 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~sp--~~~~l~s~s~dg~i~iwd~ 235 (540)
..+|.+.|++++|+|+|++||+|+.|++|+|||+.++. .+..+.+|.+.|++++|+| ++++|++++.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 34799999999999999999999999999999998774 5678899999999999986 4899999999999999999
Q ss_pred CCCc--eeEeccccCCceeEEEECCC--CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccc
Q psy18231 236 TTGQ--PVRRWREHASKVTCVKFNED--SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKST 311 (540)
Q Consensus 236 ~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (540)
++++ ....+.+|...|.+++|+|+ +.+|++++.||+|++||++.......
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~-------------------------- 142 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV-------------------------- 142 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE--------------------------
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce--------------------------
Confidence 8874 56678899999999999997 78999999999999999986531000
Q ss_pred ccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---
Q psy18231 312 KNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--- 388 (540)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--- 388 (540)
...+.+|...|.+++|+|
T Consensus 143 -----------------------------------------------------------~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 143 -----------------------------------------------------------KKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp -----------------------------------------------------------CCBTTSSSSCBCCCEECCCCC
T ss_pred -----------------------------------------------------------eeeeccccCCcceEEEccccC
Confidence 002233444455555544
Q ss_pred ----------------CeeEeeeCCCeEEEEeCCCC---ceEEeeeC--CceEEEEEecCC----cEEEeecCCCeEEEE
Q psy18231 389 ----------------HEILTASLDCRIRRYDIRTG---NLVTDYVG--EPIVDACFTRDC----QCILTCSTDECLRLF 443 (540)
Q Consensus 389 ----------------~~l~~~~~dg~i~iwd~~~~---~~~~~~~~--~~i~~~~~sp~~----~~l~~~~~dg~i~i~ 443 (540)
.+|++++.|+.|++||++.. +.+..+.+ ..|.+++|+|++ ++|++++.|++|++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE
Confidence 47999999999999999765 35555654 579999999987 889999999999999
Q ss_pred eccccc----hhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEec
Q psy18231 444 DKATGE----LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490 (540)
Q Consensus 444 d~~~~~----~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~ 490 (540)
|+.+.. ....+..|...++.+ +|+|++++|++++.|++|++|+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~v~~v--~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 244 TCDDASSNTWSPKLLHKFNDVVWHV--SWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ECSSTTCCCCBCCEEEECSSCEEEE--EECTTTCCEEEEESSSCEEEEEEC
T ss_pred EccCccccchhhhhhhcCCCcEEEE--EEcCCCCEEEEEcCCCeEEEEEEC
Confidence 987631 223456788888877 899999999999999999999975
No 74
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3e-37 Score=301.65 Aligned_cols=280 Identities=15% Similarity=0.233 Sum_probs=231.0
Q ss_pred ccccceeeeeccccccee-----eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeC
Q psy18231 143 LPKEWSIRVYRPLTVNRE-----LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 217 (540)
Q Consensus 143 ~~~~~~i~~~~~~~~~~~-----~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~ 217 (540)
.+.+.+|++|+..+.... ..|.+.|++|+|+|||++||+|+.||+|+|||+.+++.+..+.+|...+.++++ +
T Consensus 121 vgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~ 198 (420)
T 4gga_A 121 VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--N 198 (420)
T ss_dssp EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--E
T ss_pred EEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--C
Confidence 345889999999876532 246778999999999999999999999999999999999999999999998877 4
Q ss_pred CCeEEEeeCCCeEEEEEcCCC-ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhh
Q psy18231 218 SSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKE 296 (540)
Q Consensus 218 ~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 296 (540)
+.+|++|+.|+.+++||.... ..+..+.+|...+..+.|+|+++++++++.||.+++|+..+++....
T Consensus 199 ~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~----------- 267 (420)
T 4gga_A 199 SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV----------- 267 (420)
T ss_dssp TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC-----------
T ss_pred CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccce-----------
Confidence 789999999999999999864 45677889999999999999999999999999999999987652111
Q ss_pred cCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhc
Q psy18231 297 ARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKE 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (540)
.+.....
T Consensus 268 -------------------------------------------------------------------------~~~~~~~ 274 (420)
T 4gga_A 268 -------------------------------------------------------------------------PLQTFTQ 274 (420)
T ss_dssp -------------------------------------------------------------------------CSEEECC
T ss_pred -------------------------------------------------------------------------eeeeecc
Confidence 1114456
Q ss_pred ccccEEEEEecC---CeeEe--eeCCCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEeec--CCCeEEEEecccc
Q psy18231 377 ARDSITSVHVSD---HEILT--ASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTCS--TDECLRLFDKATG 448 (540)
Q Consensus 377 ~~~~v~~l~~~~---~~l~~--~~~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~--~dg~i~i~d~~~~ 448 (540)
|...|.+++|+| ..+++ |+.|++|++||+.++++...+.. ..+.++.|+|+++.+++++ .|+.|+|||+.++
T Consensus 275 ~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 275 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 788999999998 55554 45799999999999999888875 6899999999999888764 7999999999999
Q ss_pred chhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEE
Q psy18231 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 512 (540)
Q Consensus 449 ~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 512 (540)
+++.++.+|...|+++ +|+|||++|++|+.|++|++||+.+..+....+ .+...+....|
T Consensus 355 ~~v~~l~gH~~~V~~l--~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~--~~~~~~~~~s~ 414 (420)
T 4gga_A 355 AKVAELKGHTSRVLSL--TMSPDGATVASAAADETLRLWRCFELDPARRRE--REKASAAKSSL 414 (420)
T ss_dssp CEEEEECCCSSCEEEE--EECTTSSCEEEEETTTEEEEECCSCSSCC-----------------
T ss_pred cEEEEEcCCCCCEEEE--EEcCCCCEEEEEecCCeEEEEECCCCCccchhh--hccCCcccccc
Confidence 9999999999999888 899999999999999999999998877766665 44444443333
No 75
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.5e-37 Score=304.94 Aligned_cols=276 Identities=21% Similarity=0.404 Sum_probs=243.5
Q ss_pred eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC
Q psy18231 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 238 (540)
...+|.+.|.. +++++|++|++|+.||+|++||+.+++.+..+.+|.+.|++++|+ +++|++++.||+|++||+.++
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT
T ss_pred EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC
Confidence 34568887533 355578999999999999999999999999999999999999997 679999999999999999999
Q ss_pred ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccC
Q psy18231 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNG 318 (540)
Q Consensus 239 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
+.+..+.+|...|.++.|+ ++.+++++.||+|++||+.+++.
T Consensus 190 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~------------------------------------ 231 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC------------------------------------ 231 (445)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE------------------------------------
T ss_pred cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE------------------------------------
Confidence 9999999999999999995 56899999999999999987651
Q ss_pred ceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCC
Q psy18231 319 LLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDC 398 (540)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg 398 (540)
...+.+|...|.+++++++.+++++.||
T Consensus 232 ----------------------------------------------------~~~~~~~~~~v~~~~~~~~~l~~~~~dg 259 (445)
T 2ovr_B 232 ----------------------------------------------------LHVLMGHVAAVRCVQYDGRRVVSGAYDF 259 (445)
T ss_dssp ----------------------------------------------------EEEEECCSSCEEEEEECSSCEEEEETTS
T ss_pred ----------------------------------------------------EEEEcCCcccEEEEEECCCEEEEEcCCC
Confidence 1144578889999999889999999999
Q ss_pred eEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEE
Q psy18231 399 RIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 476 (540)
Q Consensus 399 ~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~ 476 (540)
.|++||+++++.+..+.+ ..|.+++| +++++++++.|+.|++||+++++.+..+.+|...+..+ .+ ++++|+
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~--~~--~~~~l~ 333 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM--EL--KDNILV 333 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE--EE--ETTEEE
T ss_pred EEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEE--EE--eCCEEE
Confidence 999999999999888875 57888888 88999999999999999999999999999998877655 33 577999
Q ss_pred EeeCCCcEEEEEecCCcceeEEEe-cccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 477 CGSSDGKIYKWQLVDSSQISTLIH-SVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 477 s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
+|+.||.|++||+.+++.+..+.. ..|...|.+++|+ +++|++++ ||.|++||+.++
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence 999999999999999999988872 1288899999996 57999999 999999999865
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.1e-37 Score=306.23 Aligned_cols=296 Identities=19% Similarity=0.281 Sum_probs=249.1
Q ss_pred hhhhcccccceeeeecccccce---eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEE
Q psy18231 138 RILYELPKEWSIRVYRPLTVNR---ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 214 (540)
Q Consensus 138 ~~~~~~~~~~~i~~~~~~~~~~---~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 214 (540)
..+++++.+++|++|+..+... ..+|.+.|.+++|+|++ +|++|+.||+|++||+.+++.+..+.+|...|.+++|
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~ 211 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI 211 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEE
Confidence 4677889999999999877653 34599999999999998 8999999999999999999999999999999999999
Q ss_pred ee--CCCeEEEeeCCCeEEEEEcCCCce-----------------------eEeccccCCceeEEEECCCCCEEEEecCC
Q psy18231 215 AC--DSSQIASGASDKSVILWEVTTGQP-----------------------VRRWREHASKVTCVKFNEDSSVVISGSQD 269 (540)
Q Consensus 215 sp--~~~~l~s~s~dg~i~iwd~~~~~~-----------------------~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 269 (540)
++ ++++|++++.|++|++||+.+++. +..+.+|...|.++ +++++++++++.|
T Consensus 212 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d 289 (464)
T 3v7d_B 212 VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYD 289 (464)
T ss_dssp EESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETT
T ss_pred ecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCC
Confidence 95 778999999999999999987653 44567888888887 4578899999999
Q ss_pred CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEE
Q psy18231 270 NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVL 349 (540)
Q Consensus 270 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (540)
|.|++||+++++.
T Consensus 290 ~~i~vwd~~~~~~------------------------------------------------------------------- 302 (464)
T 3v7d_B 290 NTLIVWDVAQMKC------------------------------------------------------------------- 302 (464)
T ss_dssp SCEEEEETTTTEE-------------------------------------------------------------------
T ss_pred CeEEEEECCCCcE-------------------------------------------------------------------
Confidence 9999999987641
Q ss_pred eecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEe
Q psy18231 350 LDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFT 425 (540)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~s 425 (540)
+..+.+|...|.+++|+| +.+++++.||.|++||+++++.+..+.+ ..|.+++|+
T Consensus 303 ---------------------~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 303 ---------------------LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS 361 (464)
T ss_dssp ---------------------EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ---------------------EEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc
Confidence 114557889999999998 7899999999999999999999988875 578888886
Q ss_pred cCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccce
Q psy18231 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 505 (540)
Q Consensus 426 p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 505 (540)
+++|++++.||.|++||+.+++....+. |...+..+ ++++++++|++|+ ||.|++||+.+++.+..... .|..
T Consensus 362 --~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~--~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~-~~~~ 434 (464)
T 3v7d_B 362 --DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAIT--TFYVSDNILVSGS-ENQFNIYNLRSGKLVHANIL-KDAD 434 (464)
T ss_dssp --SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEE--EEEECSSEEEEEE-TTEEEEEETTTCCEEESCTT-TTCS
T ss_pred --CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEE--EEEeCCCEEEEec-CCeEEEEECCCCcEEehhhc-cCCC
Confidence 5899999999999999999877554443 44455555 7899999999998 89999999999998876332 7889
Q ss_pred eeeEEEEcCCCcEEEeec-CCeeEEEEc
Q psy18231 506 VVNSLCSHPTRKHIMSAC-GNNVKLWTA 532 (540)
Q Consensus 506 ~v~~l~~s~d~~~l~s~~-d~~i~iw~~ 532 (540)
.|.+++|+ +..++++++ |+.+.+|-+
T Consensus 435 ~v~~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 435 QIWSVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred cEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence 99999997 344555555 776665543
No 77
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-37 Score=298.44 Aligned_cols=302 Identities=15% Similarity=0.205 Sum_probs=233.0
Q ss_pred cceeccc-cchhhhhhcccccceeeeecccccce---eee-----eecCeEEEEeCCC----CCEEEEeeCCCcEEEEcC
Q psy18231 127 PLLFSLP-RTITRILYELPKEWSIRVYRPLTVNR---ELF-----VLSGLMHTRFPVD----GSYCLTCGSDKKIKLWNP 193 (540)
Q Consensus 127 ~~~~s~~-~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~-----h~~~v~~v~~spd----g~~lat~~~dg~i~iwd~ 193 (540)
.+.|++. ......++....++.|++|+..+... ... |.+.|.+++|+|+ +++|++|+.||.|++||+
T Consensus 23 ~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~ 102 (366)
T 3k26_A 23 GVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINP 102 (366)
T ss_dssp EEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECT
T ss_pred EEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEc
Confidence 3445543 12233344445556899999886442 222 4477999999999 779999999999999999
Q ss_pred CCCeeEEEeecCCcceeEEEEee-CCCeEEEeeCCCeEEEEEcCCCceeEec---cccCCceeEEEECCCCCEEEEecCC
Q psy18231 194 YRNLLLKTYGGHAHEVNDATAAC-DSSQIASGASDKSVILWEVTTGQPVRRW---REHASKVTCVKFNEDSSVVISGSQD 269 (540)
Q Consensus 194 ~~~~~~~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~d 269 (540)
.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++.+..+ ..|...|.+++|+|++++|++++.|
T Consensus 103 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 103 ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC
Confidence 99999999999999999999999 9999999999999999999999988887 7899999999999999999999999
Q ss_pred CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEE
Q psy18231 270 NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVL 349 (540)
Q Consensus 270 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (540)
|.|++||+++++.... ..... ...+........
T Consensus 183 g~i~i~d~~~~~~~~~----~~~~~-------------~~~~~~~~~~~~------------------------------ 215 (366)
T 3k26_A 183 HSLKLWRINSKRMMNA----IKESY-------------DYNPNKTNRPFI------------------------------ 215 (366)
T ss_dssp SCEEEEESCSHHHHHH----HHHHH-------------TCCGGGCSSCCC------------------------------
T ss_pred CCEEEEECCCCccccc----cceeE-------------EecCCCCccccc------------------------------
Confidence 9999999987542110 00000 000000000000
Q ss_pred eecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCce--------------EEeee
Q psy18231 350 LDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNL--------------VTDYV 415 (540)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~ 415 (540)
..............|...|.+++|+++++++++.|+.|++||+.+++. +..+.
T Consensus 216 -------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (366)
T 3k26_A 216 -------------SQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD 282 (366)
T ss_dssp -------------CEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE
T ss_pred -------------ceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc
Confidence 000000011134458899999999999999999999999999987644 44444
Q ss_pred C--CceEEEEEecC--CcEEEeecCCCeEEEEeccccchhh----hhccC--cCCcceEEEEecCCCCeEEEeeCCCcEE
Q psy18231 416 G--EPIVDACFTRD--CQCILTCSTDECLRLFDKATGELLE----EYKGH--KSGDFRIECCLDSKDSQIFCGSSDGKIY 485 (540)
Q Consensus 416 ~--~~i~~~~~sp~--~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~--~~~v~~~~~~~s~~~~~l~s~s~dg~i~ 485 (540)
. ..|.+++|+|+ +++|++++.||.|++||+.+++... .+..| ...|..+ +|+|++++|++++.||.|+
T Consensus 283 ~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~~~l~s~~~dg~i~ 360 (366)
T 3k26_A 283 YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQT--SFSRDSSILIAVCDDASIW 360 (366)
T ss_dssp CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEE--EECTTSSEEEEEETTSEEE
T ss_pred ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEE--EeCCCCCeEEEEeCCCEEE
Confidence 3 57999999999 9999999999999999999987655 67777 6777777 8999999999999999999
Q ss_pred EEEec
Q psy18231 486 KWQLV 490 (540)
Q Consensus 486 iwd~~ 490 (540)
+||+.
T Consensus 361 iwd~~ 365 (366)
T 3k26_A 361 RWDRL 365 (366)
T ss_dssp EEEC-
T ss_pred EEEec
Confidence 99975
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-37 Score=299.53 Aligned_cols=268 Identities=16% Similarity=0.254 Sum_probs=228.4
Q ss_pred hhcccccceeeeeccccccee----eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEe
Q psy18231 140 LYELPKEWSIRVYRPLTVNRE----LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 215 (540)
Q Consensus 140 ~~~~~~~~~i~~~~~~~~~~~----~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 215 (540)
+..++.++.|++|+..+.... ..|.+.|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|
T Consensus 106 l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~- 184 (401)
T 4aez_A 106 VVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW- 184 (401)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-
T ss_pred EEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE-
Confidence 456678899999998876532 226789999999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEeeCCCeEEEEEcC-CCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhh
Q psy18231 216 CDSSQIASGASDKSVILWEVT-TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294 (540)
Q Consensus 216 p~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 294 (540)
++++|++++.||.|++||++ .+..+..+.+|.+.|.+++|+|++++|++++.||.|++||+++.+.
T Consensus 185 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~------------ 251 (401)
T 4aez_A 185 -NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP------------ 251 (401)
T ss_dssp -ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE------------
T ss_pred -CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc------------
Confidence 46799999999999999998 5667788889999999999999999999999999999999987541
Q ss_pred hhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhh
Q psy18231 295 KEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL 374 (540)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (540)
...+
T Consensus 252 ----------------------------------------------------------------------------~~~~ 255 (401)
T 4aez_A 252 ----------------------------------------------------------------------------KFTK 255 (401)
T ss_dssp ----------------------------------------------------------------------------EEEE
T ss_pred ----------------------------------------------------------------------------cEEe
Confidence 1134
Q ss_pred hcccccEEEEEecC---CeeEeee--CCCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEe--ecCCCeEEEEecc
Q psy18231 375 KEARDSITSVHVSD---HEILTAS--LDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILT--CSTDECLRLFDKA 446 (540)
Q Consensus 375 ~~~~~~v~~l~~~~---~~l~~~~--~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~--~~~dg~i~i~d~~ 446 (540)
..|...|.+++|+| .++++++ .|+.|++||+++++.+..+.. ..+.+++|+|+++++++ |+.||.|++||+.
T Consensus 256 ~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 256 TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 56788999999998 5566654 799999999999999888864 68999999999999999 5589999999999
Q ss_pred ccchh--hhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEE
Q psy18231 447 TGELL--EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 447 ~~~~~--~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 499 (540)
+++.. ..+.+|...+..+ +|+|++++|++++.||.|++||+.+++.+....
T Consensus 336 ~~~~~~~~~~~~h~~~v~~~--~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 336 SSGLTKQVDIPAHDTRVLYS--ALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp TTEEEEEEEEECCSSCCCEE--EECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred CccceeEEEecCCCCCEEEE--EECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 86544 4467899999888 899999999999999999999999988776654
No 79
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.7e-37 Score=294.42 Aligned_cols=298 Identities=17% Similarity=0.134 Sum_probs=221.0
Q ss_pred eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCC----eeEEEeecCCcceeEEEEee--CCCeEEEeeCCCeEEE
Q psy18231 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRN----LLLKTYGGHAHEVNDATAAC--DSSQIASGASDKSVIL 232 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~sp--~~~~l~s~s~dg~i~i 232 (540)
...+|.+.|++++|+|++++||+|+.||.|++||+.++ +....+.+|...|++++|+| ++++|++++.||+|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 34579999999999999999999999999999999876 56778889999999999999 6999999999999999
Q ss_pred EEcCCC---------ceeEeccccCCceeEEEECCC--CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCce
Q psy18231 233 WEVTTG---------QPVRRWREHASKVTCVKFNED--SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSI 301 (540)
Q Consensus 233 wd~~~~---------~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (540)
||++++ +.+..+..|...|.+++|+|+ +++|++++.||.|++||+++.+...... ..
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~--~~---------- 153 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWT--LT---------- 153 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCE--EE----------
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccc--cc----------
Confidence 999887 457778899999999999999 9999999999999999998876311110 00
Q ss_pred eEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccE
Q psy18231 302 TSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSI 381 (540)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 381 (540)
... .........|...+
T Consensus 154 ~~~---------------------------------------------------------------~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 154 SEM---------------------------------------------------------------KVLSIPPANHLQSD 170 (351)
T ss_dssp EEE---------------------------------------------------------------ESCSCCCSSCSCCC
T ss_pred ccc---------------------------------------------------------------cccccccCCcccce
Confidence 000 00000223567788
Q ss_pred EEEEecC-----CeeEeeeCCCeEEEEeCCCCce--EEeeeC--CceEEEEEecCC----cEEEeecCCCeEEEEecccc
Q psy18231 382 TSVHVSD-----HEILTASLDCRIRRYDIRTGNL--VTDYVG--EPIVDACFTRDC----QCILTCSTDECLRLFDKATG 448 (540)
Q Consensus 382 ~~l~~~~-----~~l~~~~~dg~i~iwd~~~~~~--~~~~~~--~~i~~~~~sp~~----~~l~~~~~dg~i~i~d~~~~ 448 (540)
.+++|+| ..+++++.|+.+.+|+...++. +..+.+ ..|.+++|+|++ ++|++++.||.|++||++++
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 9999975 6899999999998888887765 445543 589999999998 89999999999999999887
Q ss_pred chhhhhccCcCCcceEEEEecCCCCeEEEe----eCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-
Q psy18231 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCG----SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC- 523 (540)
Q Consensus 449 ~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~----s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~- 523 (540)
........+....... ..++....++.+ .....+.+|+..+.+.+..+. +|...|++++|+|++++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~~~ 326 (351)
T 3f3f_A 251 LSPLASEESLTNSNMF--DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD--DHNGEVWSVSWNLTGTILSSAGD 326 (351)
T ss_dssp C-----------------------------------------CCSEEEEEEEEEC--TTSSCEEEEEECSSSCCEEEEET
T ss_pred cCccccCCcccceecc--CCCcccccccccccccccceeeeecccccccEEEEEe--cccccEEEEEEcCCCCEEEEecC
Confidence 6554443333322222 333444344433 344556677766777777777 8999999999999999999999
Q ss_pred CCeeEEEEcccc
Q psy18231 524 GNNVKLWTAEED 535 (540)
Q Consensus 524 d~~i~iw~~~~~ 535 (540)
||.|++|+++.+
T Consensus 327 dg~v~iw~~~~~ 338 (351)
T 3f3f_A 327 DGKVRLWKATYS 338 (351)
T ss_dssp TSCEEEEEECTT
T ss_pred CCcEEEEecCcC
Confidence 999999999864
No 80
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.1e-37 Score=322.55 Aligned_cols=271 Identities=19% Similarity=0.328 Sum_probs=228.0
Q ss_pred ccccchhhhhhcccccceeeeeccccc--------ceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEe
Q psy18231 131 SLPRTITRILYELPKEWSIRVYRPLTV--------NRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY 202 (540)
Q Consensus 131 s~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~ 202 (540)
..+.....++++++.|++|++|+.... ....+|...|.+++|+|++++|++|+.||+|+|||+.+++.+..+
T Consensus 389 ~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~ 468 (694)
T 3dm0_A 389 ATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRF 468 (694)
T ss_dssp ECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEE
Confidence 333333567788999999999987642 234579999999999999999999999999999999999999999
Q ss_pred ecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEe---ccccCCceeEEEECCCC--CEEEEecCCCcEEEEEe
Q psy18231 203 GGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRR---WREHASKVTCVKFNEDS--SVVISGSQDNTVMMWDV 277 (540)
Q Consensus 203 ~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~---~~~h~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~ 277 (540)
.+|...|.+++|+|++++|++++.|++|++||+........ ..+|...|.+++|+|++ ..|++++.||+|++||+
T Consensus 469 ~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~ 548 (694)
T 3dm0_A 469 VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 548 (694)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEET
T ss_pred eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEEC
Confidence 99999999999999999999999999999999865543332 24789999999999986 58999999999999999
Q ss_pred cCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeeccccee
Q psy18231 278 KSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQ 357 (540)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (540)
++.+.
T Consensus 549 ~~~~~--------------------------------------------------------------------------- 553 (694)
T 3dm0_A 549 SNCKL--------------------------------------------------------------------------- 553 (694)
T ss_dssp TTCCE---------------------------------------------------------------------------
T ss_pred CCCcE---------------------------------------------------------------------------
Confidence 87651
Q ss_pred cccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEee
Q psy18231 358 IGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTC 434 (540)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~ 434 (540)
...+.+|...|.+++|+| +++++++.||.|++||+++++.+..+.. ..+.+++|+|++.+|+++
T Consensus 554 -------------~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 620 (694)
T 3dm0_A 554 -------------RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAA 620 (694)
T ss_dssp -------------EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEE
T ss_pred -------------EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEE
Confidence 114567899999999998 8899999999999999999998887765 579999999999888776
Q ss_pred cCCCeEEEEeccccchhhhhccCc-----------------CCcceEEEEecCCCCeEEEeeCCCcEEEEEec
Q psy18231 435 STDECLRLFDKATGELLEEYKGHK-----------------SGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490 (540)
Q Consensus 435 ~~dg~i~i~d~~~~~~~~~~~~~~-----------------~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~ 490 (540)
+ ++.|++||+++++.+..+..+. ..+.+..++|+|+|++|++|+.||+|++|++.
T Consensus 621 ~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 621 T-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp E-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred c-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 5 5669999999988766554321 11234455899999999999999999999975
No 81
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-38 Score=296.29 Aligned_cols=243 Identities=18% Similarity=0.205 Sum_probs=200.9
Q ss_pred EeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc--eeEeccccCCceeEEEECC--CCCEEEEecCCCcEEEEE
Q psy18231 201 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ--PVRRWREHASKVTCVKFNE--DSSVVISGSQDNTVMMWD 276 (540)
Q Consensus 201 ~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd 276 (540)
.+.+|.+.|++++|+|++++||+|+.|++|+|||+.+++ .+..+.+|.+.|.+++|++ ++++|++++.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998875 4677889999999999986 489999999999999999
Q ss_pred ecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccce
Q psy18231 277 VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
+++++...
T Consensus 88 ~~~~~~~~------------------------------------------------------------------------ 95 (316)
T 3bg1_A 88 EENGTWEK------------------------------------------------------------------------ 95 (316)
T ss_dssp CSSSCCCE------------------------------------------------------------------------
T ss_pred CCCCcceE------------------------------------------------------------------------
Confidence 98654111
Q ss_pred ecccccccccccchhhhhhcccccEEEEEecC----CeeEeeeCCCeEEEEeCCCCceE---Eeee--CCceEEEEEecC
Q psy18231 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSD----HEILTASLDCRIRRYDIRTGNLV---TDYV--GEPIVDACFTRD 427 (540)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~l~~~~~dg~i~iwd~~~~~~~---~~~~--~~~i~~~~~sp~ 427 (540)
...+.+|...|.+++|+| .+|++++.|+.|++||++.+... ..+. ...+.+++|+|+
T Consensus 96 --------------~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 96 --------------SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp --------------EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred --------------EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 114457889999999998 37999999999999999876322 2222 257899999997
Q ss_pred -----------------CcEEEeecCCCeEEEEecccc---chhhhhccCcCCcceEEEEecCCC----CeEEEeeCCCc
Q psy18231 428 -----------------CQCILTCSTDECLRLFDKATG---ELLEEYKGHKSGDFRIECCLDSKD----SQIFCGSSDGK 483 (540)
Q Consensus 428 -----------------~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~~s~~~----~~l~s~s~dg~ 483 (540)
+++|++|+.|+.|++||++.. +.+..+.+|...|..+ +|+|++ ++|++++.|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v--~~sp~~~~~~~~las~s~D~~ 239 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV--AWAPSIGLPTSTIASCSQDGR 239 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEE--ECCCCSSCSCCEEEEEETTCE
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEE--EecCCCCCCCceEEEEcCCCe
Confidence 478999999999999999754 4677889999999888 899986 78999999999
Q ss_pred EEEEEecCCc----ceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcc
Q psy18231 484 IYKWQLVDSS----QISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 484 i~iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
|++||+.+.. ....+. .|...|.+++|+|++++|++++ |++|++|+..
T Consensus 240 v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 240 VFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 9999987632 233444 6889999999999999999999 9999999976
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.1e-37 Score=324.56 Aligned_cols=316 Identities=17% Similarity=0.211 Sum_probs=262.2
Q ss_pred cceeccccchhhhhhcccccceeeeecccccc---eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEee
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRPLTVN---RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG 203 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~ 203 (540)
.+.|+++ ...++.+..++.|++|+..+.. ....|.++|.+++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 18 ~i~~sp~---~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 18 GIDFHPT---EPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp EEEECSS---SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCC---CCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 3445554 3455566788999999987754 334599999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC-ceeEeccccCCceeEEEECC-CCCEEEEecCCCcEEEEEecCCC
Q psy18231 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNE-DSSVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 204 ~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~ 281 (540)
+|.+.|++++|+|++++|++++.||+|++||+.++ .....+.+|...|.+++|+| +++.|++++.||+|++||+.++.
T Consensus 95 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999999999999999999987 66777889999999999999 88999999999999999997655
Q ss_pred CCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccc
Q psy18231 282 HHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDV 361 (540)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (540)
....
T Consensus 175 ~~~~---------------------------------------------------------------------------- 178 (814)
T 3mkq_A 175 PNFT---------------------------------------------------------------------------- 178 (814)
T ss_dssp CSEE----------------------------------------------------------------------------
T ss_pred ceeE----------------------------------------------------------------------------
Confidence 2000
Q ss_pred cccccccchhhhhhcccccEEEEEecC----CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeec
Q psy18231 362 TPISIHNSCFQALKEARDSITSVHVSD----HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCS 435 (540)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~ 435 (540)
....+...+.+++|+| ..+++++.||.|++||+++++.+..+.+ ..|.+++|+|+++++++++
T Consensus 179 -----------~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 179 -----------LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp -----------EECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred -----------EecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 1112346788888875 6899999999999999999998888875 5899999999999999999
Q ss_pred CCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCe-EEEeeCCCcEEEEEecCCcceeEEE---------------
Q psy18231 436 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLI--------------- 499 (540)
Q Consensus 436 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~--------------- 499 (540)
.||.|++||+.+++.+..+..|...+..+ +|+|++.. +++++.|+.+.+|++........+.
T Consensus 248 ~dg~v~vwd~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (814)
T 3mkq_A 248 EDGTLKIWNSSTYKVEKTLNVGLERSWCI--ATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAA 325 (814)
T ss_dssp TTSCEEEEETTTCSEEEEECCSSSSEEEE--EECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCT
T ss_pred CCCeEEEEECCCCcEEEEeecCCCcEEEE--EEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccc
Confidence 99999999999999999999998888887 89999874 2555557778899876543222111
Q ss_pred --------------------------ecccceeeeEEEEcCCCcEEEeecCCeeEEEEccc
Q psy18231 500 --------------------------HSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 534 (540)
Q Consensus 500 --------------------------~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~~ 534 (540)
...+...+.+++|+|+|++|++++|+.+.+|++..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~ 386 (814)
T 3mkq_A 326 SDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALA 386 (814)
T ss_dssp TCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETTT
T ss_pred eeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECcc
Confidence 01344467889999999999888888999998753
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-36 Score=290.67 Aligned_cols=245 Identities=16% Similarity=0.208 Sum_probs=211.4
Q ss_pred eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCC--CCeeEEEeecCCcceeEEEEeeC--CCeEEEeeCCCeEEEEE
Q psy18231 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPY--RNLLLKTYGGHAHEVNDATAACD--SSQIASGASDKSVILWE 234 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~i~iwd 234 (540)
...+|.+.|++++|+|++++||+|+.||.|+|||+. +++.+..+.+|...|++++|+|+ +++|++++.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 345799999999999999999999999999999998 66778889999999999999987 99999999999999999
Q ss_pred cCCCc--eeEeccccCCceeEEEECCC--CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecc
Q psy18231 235 VTTGQ--PVRRWREHASKVTCVKFNED--SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310 (540)
Q Consensus 235 ~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (540)
+.+++ .+..+..|...|.+++|+|+ +.+|++++.||.|++||+++.......
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~------------------------ 141 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI------------------------ 141 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE------------------------
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE------------------------
Confidence 99987 67778889999999999999 999999999999999999876421111
Q ss_pred cccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--
Q psy18231 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-- 388 (540)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-- 388 (540)
.+..|...|.+++|+|
T Consensus 142 --------------------------------------------------------------~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 142 --------------------------------------------------------------IIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp --------------------------------------------------------------EEECCTTCEEEEEECCCC
T ss_pred --------------------------------------------------------------EecCCCCceEEEEEcCcc
Confidence 3346778889999876
Q ss_pred -------------CeeEeeeCCCeEEEEeCCCCce----EEeee--CCceEEEEEecC---CcEEEeecCCCeEEEEecc
Q psy18231 389 -------------HEILTASLDCRIRRYDIRTGNL----VTDYV--GEPIVDACFTRD---CQCILTCSTDECLRLFDKA 446 (540)
Q Consensus 389 -------------~~l~~~~~dg~i~iwd~~~~~~----~~~~~--~~~i~~~~~sp~---~~~l~~~~~dg~i~i~d~~ 446 (540)
..+++++.||.|++||+++++. ...+. ...|.+++|+|+ +++|++++.||.|++||+.
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 6799999999999999987653 33443 357999999999 9999999999999999998
Q ss_pred ccc-----hhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecC
Q psy18231 447 TGE-----LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491 (540)
Q Consensus 447 ~~~-----~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~ 491 (540)
+++ .+.....|...+..+ +|+|++++|++++.||.|++|++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~--~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 240 NEQGPWKKTLLKEEKFPDVLWRA--SWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp STTSCCEEEESSSSCCSSCEEEE--EECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCccceeeeeccccCCCcEEEE--EEcCCCCEEEEecCCCcEEEEeCCC
Confidence 863 233344577777777 8999999999999999999999874
No 84
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.6e-37 Score=297.74 Aligned_cols=278 Identities=21% Similarity=0.291 Sum_probs=231.8
Q ss_pred eEEEEeCCCCCEEE-EeeCCCcEEEEcCCCCe----eEEEeecCCcceeEEEEee-CCCeEEEeeCCCeEEEEEcCCC--
Q psy18231 167 LMHTRFPVDGSYCL-TCGSDKKIKLWNPYRNL----LLKTYGGHAHEVNDATAAC-DSSQIASGASDKSVILWEVTTG-- 238 (540)
Q Consensus 167 v~~v~~spdg~~la-t~~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg~i~iwd~~~~-- 238 (540)
...++++|+...++ +++.||.|+||++.+.. .+..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 44578888875544 57889999999986542 3456788999999999999 9999999999999999999988
Q ss_pred -----ceeEeccccCCceeEEEECCCC-CEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccc
Q psy18231 239 -----QPVRRWREHASKVTCVKFNEDS-SVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTK 312 (540)
Q Consensus 239 -----~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
+.+..+.+|...|.+++|+|++ ++|++++.||.|++||+++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~------------------------------ 166 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA------------------------------ 166 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE------------------------------
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc------------------------------
Confidence 6678888999999999999998 6999999999999999987641
Q ss_pred cccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhh--hcccccEEEEEecC--
Q psy18231 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL--KEARDSITSVHVSD-- 388 (540)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~l~~~~-- 388 (540)
...+ ..|...|.+++|+|
T Consensus 167 ----------------------------------------------------------~~~~~~~~~~~~v~~~~~~~~~ 188 (402)
T 2aq5_A 167 ----------------------------------------------------------VLTLGPDVHPDTIYSVDWSRDG 188 (402)
T ss_dssp ----------------------------------------------------------EEEECTTTCCSCEEEEEECTTS
T ss_pred ----------------------------------------------------------cEEEecCCCCCceEEEEECCCC
Confidence 1133 56889999999998
Q ss_pred CeeEeeeCCCeEEEEeCCCCceEEee-eCC---ceEEEEEecCCcEEEee---cCCCeEEEEeccccch-hhhhc-cCcC
Q psy18231 389 HEILTASLDCRIRRYDIRTGNLVTDY-VGE---PIVDACFTRDCQCILTC---STDECLRLFDKATGEL-LEEYK-GHKS 459 (540)
Q Consensus 389 ~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~---~i~~~~~sp~~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~-~~~~ 459 (540)
+.+++++.||.|++||+++++.+..+ ..+ .+.+++|+|++++|++| +.|+.|++||+++++. +.... .|..
T Consensus 189 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 268 (402)
T 2aq5_A 189 ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSS 268 (402)
T ss_dssp SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCS
T ss_pred CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCC
Confidence 78999999999999999999998887 332 48999999999999999 7999999999998765 32332 3556
Q ss_pred CcceEEEEecCCCCeEE-EeeCCCcEEEEEecCCcc-eeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEcccc
Q psy18231 460 GDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVDSSQ-ISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED 535 (540)
Q Consensus 460 ~v~~~~~~~s~~~~~l~-s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~~~ 535 (540)
.+..+ +|+|++++|+ +|+.||.|++||+.+++. +..+....|...|.+++|+|++.+++++ |+.+++|++.++
T Consensus 269 ~v~~~--~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~-~~~~~~~~l~~~ 343 (402)
T 2aq5_A 269 GVLLP--FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK-CEIARFYKLHER 343 (402)
T ss_dssp SCEEE--EEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG-TEEEEEEEEETT
T ss_pred ceeEE--EEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceec-ceeEEEEEcCCC
Confidence 66666 8999999986 556799999999999885 5666533466899999999999988753 679999998764
No 85
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.9e-36 Score=282.71 Aligned_cols=266 Identities=18% Similarity=0.319 Sum_probs=227.3
Q ss_pred hhhhhcccccceeeeecccccc--------eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcc
Q psy18231 137 TRILYELPKEWSIRVYRPLTVN--------RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE 208 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~--------~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~ 208 (540)
..++++++.|++|++|+..... ...+|.+.|.+++|+|+|++|++++.|+.|++|+............+...
T Consensus 51 ~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~ 130 (340)
T 4aow_A 51 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 130 (340)
T ss_dssp TTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCc
Confidence 4677889999999999976532 23458999999999999999999999999999999999999989889999
Q ss_pred eeEEEEeeCCCeEEEeeCCCeEEEEEcCCCcee-EeccccCCceeEEEECCCC--CEEEEecCCCcEEEEEecCCCCCCc
Q psy18231 209 VNDATAACDSSQIASGASDKSVILWEVTTGQPV-RRWREHASKVTCVKFNEDS--SVVISGSQDNTVMMWDVKSRSHHPI 285 (540)
Q Consensus 209 v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~ 285 (540)
+..+.+++++++|++++.|+.+++||+...... ....+|...+..++|++++ .++++++.|+.|++||+++.+.
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~--- 207 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL--- 207 (340)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE---
T ss_pred eeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce---
Confidence 999999999999999999999999999766443 4466899999999998864 5788999999999999987651
Q ss_pred chhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccc
Q psy18231 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS 365 (540)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (540)
T Consensus 208 -------------------------------------------------------------------------------- 207 (340)
T 4aow_A 208 -------------------------------------------------------------------------------- 207 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEeecCCCeEEE
Q psy18231 366 IHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTCSTDECLRL 442 (540)
Q Consensus 366 ~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~dg~i~i 442 (540)
...+.+|...|.+++|+| ++|++++.||.|++||+++.+.+..+.. ..+.+++|+|++.++ +++.|+.|++
T Consensus 208 -----~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~i 281 (340)
T 4aow_A 208 -----KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPSIKI 281 (340)
T ss_dssp -----EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTEEEE
T ss_pred -----eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCEEEE
Confidence 114567889999999998 7899999999999999999999888875 679999999987655 5567999999
Q ss_pred Eeccccchhhh---------hccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCc
Q psy18231 443 FDKATGELLEE---------YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS 493 (540)
Q Consensus 443 ~d~~~~~~~~~---------~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~ 493 (540)
||++++..+.. ..+|...|+++ +|+|+|++|++|+.||.|+|||+.+|+
T Consensus 282 wd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l--~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 282 WDLEGKIIVDELKQEVISTSSKAEPPQCTSL--AWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTTTEEEEEECCC-------CCCCCEEEE--EECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EECCCCeEEEeccccceeeeccCCCCCEEEE--EECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 99987765433 34677788777 899999999999999999999999886
No 86
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1e-36 Score=296.15 Aligned_cols=265 Identities=14% Similarity=0.171 Sum_probs=229.5
Q ss_pred hhhhcccccceeeeecccccc---------eeeeeecCeEEEEeCCC----C---CEEEEeeCCCcEEEEcCCCCee---
Q psy18231 138 RILYELPKEWSIRVYRPLTVN---------RELFVLSGLMHTRFPVD----G---SYCLTCGSDKKIKLWNPYRNLL--- 198 (540)
Q Consensus 138 ~~~~~~~~~~~i~~~~~~~~~---------~~~~h~~~v~~v~~spd----g---~~lat~~~dg~i~iwd~~~~~~--- 198 (540)
..++.++.++.|++|+..... ....|..+|.+++|+|+ + ++|++++.||.|++||+.+++.
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 567788899999999987654 23458999999999999 9 9999999999999999998887
Q ss_pred --EEEeecC-----CcceeEEEEe----eCCCe-EEEeeCCCeEEEEEcCC------CceeE-----ec-------cccC
Q psy18231 199 --LKTYGGH-----AHEVNDATAA----CDSSQ-IASGASDKSVILWEVTT------GQPVR-----RW-------REHA 248 (540)
Q Consensus 199 --~~~~~~h-----~~~v~~l~~s----p~~~~-l~s~s~dg~i~iwd~~~------~~~~~-----~~-------~~h~ 248 (540)
+..+..| ...|.+++|+ |++++ |++++.||.|++||+.+ ++.+. .+ ..|.
T Consensus 107 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 186 (397)
T ss_dssp EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSC
T ss_pred ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCC
Confidence 8888888 5999999999 99999 99999999999999998 66665 66 4489
Q ss_pred CceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeee
Q psy18231 249 SKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFR 328 (540)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (540)
..|.+++|+|++ +|++++.||.|++||+++.+.
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~---------------------------------------------- 219 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRP---------------------------------------------- 219 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE----------------------------------------------
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCce----------------------------------------------
Confidence 999999999999 999999999999999987541
Q ss_pred ecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhc---c---cccEEEEEecC--CeeEeeeCC---
Q psy18231 329 CKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKE---A---RDSITSVHVSD--HEILTASLD--- 397 (540)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~l~~~~--~~l~~~~~d--- 397 (540)
+..+.. | ...|.+++|+| .++++++.|
T Consensus 220 ------------------------------------------~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~ 257 (397)
T 1sq9_A 220 ------------------------------------------LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 257 (397)
T ss_dssp ------------------------------------------EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTE
T ss_pred ------------------------------------------eEEEeccccccccCCccceEEECCCCCEEEEEecCCCC
Confidence 012233 6 78999999998 889999999
Q ss_pred CeEEEEeCCCCceEEeeeC---------------CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhc------c
Q psy18231 398 CRIRRYDIRTGNLVTDYVG---------------EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK------G 456 (540)
Q Consensus 398 g~i~iwd~~~~~~~~~~~~---------------~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~ 456 (540)
|.|++||+++++.+..+.. ..|.+++|+|++++|++++.||.|++||+.+++.+..+. +
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 337 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE 337 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS
T ss_pred ceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCccc
Confidence 9999999999998887753 579999999999999999999999999999999998888 7
Q ss_pred C---------------cCCcceEEEEecCCC----------CeEEEeeCCCcEEEEEecCCc
Q psy18231 457 H---------------KSGDFRIECCLDSKD----------SQIFCGSSDGKIYKWQLVDSS 493 (540)
Q Consensus 457 ~---------------~~~v~~~~~~~s~~~----------~~l~s~s~dg~i~iwd~~~~~ 493 (540)
| ...|..+ +|+|++ ++|++++.||.|++||+.+++
T Consensus 338 ~~~~~~~g~~~~~~~~~~~v~~~--~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 338 IEEDILAVDEHGDSLAEPGVFDV--KFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp SGGGCCCBCTTSCBCSSCCEEEE--EEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred chhhhhccccccccccCCceeEE--EeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 7 8888877 899998 799999999999999998764
No 87
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-37 Score=304.18 Aligned_cols=272 Identities=8% Similarity=0.022 Sum_probs=207.9
Q ss_pred eeeeecCeEEEEeCCCC---------CEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeE
Q psy18231 160 ELFVLSGLMHTRFPVDG---------SYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg---------~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i 230 (540)
...+.+.|.+|+|+|++ ++||+|+.++.. -..+|+++.+++++.|++|
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~-----------------------~~~~~~~~~laS~s~D~tI 185 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD-----------------------EPLNEHLEMFDKEKHSSCI 185 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-----------------------------------------CEEE
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccC-----------------------CccchhhhhhccCCCCceE
Confidence 34467899999999987 899999866420 0137899999999999999
Q ss_pred EEEEcCCCcee----EeccccCCceeEEEECCC------CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCc
Q psy18231 231 ILWEVTTGQPV----RRWREHASKVTCVKFNED------SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDS 300 (540)
Q Consensus 231 ~iwd~~~~~~~----~~~~~h~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 300 (540)
+|||+.+++.. ..+..|.+.|.+++|+|+ +.+|++++.||+|++||+..+.......
T Consensus 186 ~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~------------- 252 (524)
T 2j04_B 186 QIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF------------- 252 (524)
T ss_dssp EEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE-------------
T ss_pred EEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc-------------
Confidence 99999887643 345678899999999996 5799999999999999997664210000
Q ss_pred eeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhccccc
Q psy18231 301 ITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDS 380 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (540)
. ........+.+|...
T Consensus 253 ---~-------------------------------------------------------------~~~~p~~~l~~h~~~ 268 (524)
T 2j04_B 253 ---K-------------------------------------------------------------MCEKPSLTLSLADSL 268 (524)
T ss_dssp ---E-------------------------------------------------------------CCCSCSEEECCTTTC
T ss_pred ---e-------------------------------------------------------------eecCceEEEEcCCCC
Confidence 0 000011145678899
Q ss_pred EEEEEecC-CeeEeeeCCCeEEEEeCCCCc-eEEeee--CCceEEE--EEecCC-cEEEeecCCCeEEEEeccccchhhh
Q psy18231 381 ITSVHVSD-HEILTASLDCRIRRYDIRTGN-LVTDYV--GEPIVDA--CFTRDC-QCILTCSTDECLRLFDKATGELLEE 453 (540)
Q Consensus 381 v~~l~~~~-~~l~~~~~dg~i~iwd~~~~~-~~~~~~--~~~i~~~--~~sp~~-~~l~~~~~dg~i~i~d~~~~~~~~~ 453 (540)
|.+++|++ ..|++|+.||+|++||++++. +...+. ...|.++ +|+|++ ++|++++.|++|+|||+++++.+..
T Consensus 269 v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~ 348 (524)
T 2j04_B 269 ITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT 348 (524)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE
T ss_pred EEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc
Confidence 99999988 889999999999999999764 333344 4689999 578888 8999999999999999999998888
Q ss_pred hccCcC--CcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEE
Q psy18231 454 YKGHKS--GDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLW 530 (540)
Q Consensus 454 ~~~~~~--~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw 530 (540)
+.+|.. .+..+ +|+|+++.+++++.|++|++||++++.++..+. +|.+.|++++|||+|++|++|+ |++|++|
T Consensus 349 ~~~~~~~~~v~~v--~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~--gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lw 424 (524)
T 2j04_B 349 TVSRFRGSNLVPV--VYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV--SRETTITAIGVSRLHPMVLAGSADGSLIIT 424 (524)
T ss_dssp EEEECSCCSCCCE--EEETTTTEEEEECSSSEEEEEETTCTTCCEEEE--ECSSCEEEEECCSSCCBCEEEETTTEEECC
T ss_pred cccccccCcccce--EeCCCcCeEEEeCCCCcEEEEECcccccceeee--cCCCceEEEEeCCCCCeEEEEECCCEEEEE
Confidence 887764 35666 899999999999999999999999999888888 8999999999999999999999 9999999
Q ss_pred Ecccc
Q psy18231 531 TAEED 535 (540)
Q Consensus 531 ~~~~~ 535 (540)
++...
T Consensus 425 d~~~~ 429 (524)
T 2j04_B 425 NAARR 429 (524)
T ss_dssp BSCSS
T ss_pred echHh
Confidence 98654
No 88
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=291.12 Aligned_cols=268 Identities=15% Similarity=0.226 Sum_probs=223.4
Q ss_pred hhhhhhcccc---cceeeeecccccce----eeeeecCeEEEEeCCC---CCEEEEeeCCCcEEEEcCCCCe-eEEEeec
Q psy18231 136 ITRILYELPK---EWSIRVYRPLTVNR----ELFVLSGLMHTRFPVD---GSYCLTCGSDKKIKLWNPYRNL-LLKTYGG 204 (540)
Q Consensus 136 ~~~~~~~~~~---~~~i~~~~~~~~~~----~~~h~~~v~~v~~spd---g~~lat~~~dg~i~iwd~~~~~-~~~~~~~ 204 (540)
...+++.++. ++.|++|+..+... ...|.+.|.+++|+|+ +++|++|+.||.|++||+.+++ .+..+.+
T Consensus 30 ~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 109 (357)
T 3i2n_A 30 SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG 109 (357)
T ss_dssp SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe
Confidence 3445555555 89999999887542 3469999999999998 7999999999999999999988 8899999
Q ss_pred CCcceeEEEE------eeCCCeEEEeeCCCeEEEEEcCCCc-eeEeccccCC----ceeEEE----ECCCCCEEEEecCC
Q psy18231 205 HAHEVNDATA------ACDSSQIASGASDKSVILWEVTTGQ-PVRRWREHAS----KVTCVK----FNEDSSVVISGSQD 269 (540)
Q Consensus 205 h~~~v~~l~~------sp~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~h~~----~v~~~~----~~~~~~~l~s~~~d 269 (540)
|...|.++.| +|++++|++++.||.|++||+.+++ .+..+..|.+ .+.+++ |+|++++|++++.|
T Consensus 110 ~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 189 (357)
T 3i2n_A 110 HKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN 189 (357)
T ss_dssp CSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT
T ss_pred cccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC
Confidence 9999999955 6799999999999999999999987 6777766554 899998 78899999999999
Q ss_pred CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEE
Q psy18231 270 NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVL 349 (540)
Q Consensus 270 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (540)
|.|++||+++++.
T Consensus 190 ~~i~i~d~~~~~~------------------------------------------------------------------- 202 (357)
T 3i2n_A 190 GDIKLFDLRNMAL------------------------------------------------------------------- 202 (357)
T ss_dssp SEEEEEETTTTEE-------------------------------------------------------------------
T ss_pred CeEEEEECccCce-------------------------------------------------------------------
Confidence 9999999987641
Q ss_pred eecccceecccccccccccchhhhhhcccccEEEEEecC-----CeeEeeeCCCeEEEEeCCCCceEEee-------eCC
Q psy18231 350 LDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-----HEILTASLDCRIRRYDIRTGNLVTDY-------VGE 417 (540)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-----~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~ 417 (540)
.....|...|.+++|+| +.+++++.||.|++||+++++....+ +..
T Consensus 203 ----------------------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 260 (357)
T 3i2n_A 203 ----------------------RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKS 260 (357)
T ss_dssp ----------------------EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSS
T ss_pred ----------------------eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcC
Confidence 02235678899999985 78999999999999999987654433 236
Q ss_pred ceEEEEEecCCc-EEEeecCCCeEEEEecccc-------------------chhhhhccCcCCcceEEEEecCCCCeEE-
Q psy18231 418 PIVDACFTRDCQ-CILTCSTDECLRLFDKATG-------------------ELLEEYKGHKSGDFRIECCLDSKDSQIF- 476 (540)
Q Consensus 418 ~i~~~~~sp~~~-~l~~~~~dg~i~i~d~~~~-------------------~~~~~~~~~~~~v~~~~~~~s~~~~~l~- 476 (540)
.|.+++|+|+++ +|++++.||.|++||++++ +.+..+.+|...|..+ +|+|++++|+
T Consensus 261 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~~~l~~ 338 (357)
T 3i2n_A 261 TVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSL--DWSPDKRGLCV 338 (357)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEE--EECSSSTTEEE
T ss_pred CEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEE--EEcCCCCeEEE
Confidence 899999999998 8999999999999999754 3466778899888887 8999999998
Q ss_pred EeeCCCcEEEEEecCCcc
Q psy18231 477 CGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 477 s~s~dg~i~iwd~~~~~~ 494 (540)
+++.||.|++||+.+.+.
T Consensus 339 s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 339 CSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEETTSEEEEEEECC---
T ss_pred EecCCCcEEEEECCCccc
Confidence 899999999999987654
No 89
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.6e-35 Score=274.24 Aligned_cols=262 Identities=15% Similarity=0.252 Sum_probs=223.1
Q ss_pred cccceeeeeccccccee-----eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCC
Q psy18231 144 PKEWSIRVYRPLTVNRE-----LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 218 (540)
Q Consensus 144 ~~~~~i~~~~~~~~~~~-----~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~ 218 (540)
+.|++|++|+..+.... ..|...|++++|+|++++||+|+.||+|++||+.+++.+..+.+|...+.++. +++
T Consensus 42 g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~--~~~ 119 (318)
T 4ggc_A 42 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS--WNS 119 (318)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE--EET
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee--cCC
Confidence 45889999998876532 24778899999999999999999999999999999999999999999887654 467
Q ss_pred CeEEEeeCCCeEEEEEcCCC-ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhc
Q psy18231 219 SQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEA 297 (540)
Q Consensus 219 ~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 297 (540)
..+++++.++.+++|+.... ..+..+.+|...+..+.+++++++|++++.||.|++||+++++.....
T Consensus 120 ~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~----------- 188 (318)
T 4ggc_A 120 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP----------- 188 (318)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCC-----------
T ss_pred CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccc-----------
Confidence 89999999999999999876 455678899999999999999999999999999999999876531111
Q ss_pred CCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcc
Q psy18231 298 RDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEA 377 (540)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (540)
......+
T Consensus 189 -------------------------------------------------------------------------~~~~~~~ 195 (318)
T 4ggc_A 189 -------------------------------------------------------------------------LQTFTQH 195 (318)
T ss_dssp -------------------------------------------------------------------------SEEECCC
T ss_pred -------------------------------------------------------------------------eeeeccc
Confidence 1133456
Q ss_pred cccEEEEEecC---Ce--eEeeeCCCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEeec--CCCeEEEEeccccc
Q psy18231 378 RDSITSVHVSD---HE--ILTASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTCS--TDECLRLFDKATGE 449 (540)
Q Consensus 378 ~~~v~~l~~~~---~~--l~~~~~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~--~dg~i~i~d~~~~~ 449 (540)
...|.++.+.+ .. +++++.++.|++||.+.......... ..+..+.|+|+++.+++++ .|+.|++||+++++
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~ 275 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 275 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred CCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc
Confidence 67888888887 33 34677899999999998887766654 6899999999998887654 79999999999999
Q ss_pred hhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCc
Q psy18231 450 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS 493 (540)
Q Consensus 450 ~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~ 493 (540)
++.++.+|...|+++ +|+|+|++|++|+.||+|+|||+.+..
T Consensus 276 ~~~~l~gH~~~V~~l--~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 276 KVAELKGHTSRVLSL--TMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEECCCSSCEEEE--EECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEEEEcCCCCCEEEE--EEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999999999988 899999999999999999999987654
No 90
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.5e-36 Score=287.74 Aligned_cols=263 Identities=14% Similarity=0.156 Sum_probs=219.4
Q ss_pred hhhhhcccccceeeeeccccccee-----eeeecCeEEEEeCC-CCCEEEEeeCCCcEEEEcCCCCeeEEEeecC---Cc
Q psy18231 137 TRILYELPKEWSIRVYRPLTVNRE-----LFVLSGLMHTRFPV-DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH---AH 207 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~~~-----~~h~~~v~~v~~sp-dg~~lat~~~dg~i~iwd~~~~~~~~~~~~h---~~ 207 (540)
..+++.++.++.|++|+..+.... .+|.+.|.+++|+| ++++|++++.|+.|++||+.+ ..+..+..| ..
T Consensus 86 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~ 164 (383)
T 3ei3_B 86 PTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDY 164 (383)
T ss_dssp TTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSC
T ss_pred CCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCC
Confidence 357778889999999998865432 24899999999999 789999999999999999985 555555444 48
Q ss_pred ceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCC-EEEEecCCCcEEEEEecCCCCCCcc
Q psy18231 208 EVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS-VVISGSQDNTVMMWDVKSRSHHPIQ 286 (540)
Q Consensus 208 ~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~ 286 (540)
.|.+++|+|++++|++++.|+.|++||+ +++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+++.+....
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~- 242 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNS- 242 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTC-
T ss_pred CeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccc-
Confidence 8999999999999999999999999999 6788888999999999999999998 999999999999999987542100
Q ss_pred hhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccccc
Q psy18231 287 VRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI 366 (540)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (540)
T Consensus 243 -------------------------------------------------------------------------------- 242 (383)
T 3ei3_B 243 -------------------------------------------------------------------------------- 242 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhcccccEEEEEecC---CeeEeeeCCCeEEEEeCCCCceEEeeeC-------------------CceEEEEE
Q psy18231 367 HNSCFQALKEARDSITSVHVSD---HEILTASLDCRIRRYDIRTGNLVTDYVG-------------------EPIVDACF 424 (540)
Q Consensus 367 ~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------------------~~i~~~~~ 424 (540)
.. ...+|...|.+++|+| .++++++.|+.|++||+++++....+.+ ..+..++|
T Consensus 243 ---~~-~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 243 ---YI-AEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp ---EE-EEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred ---eE-EEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence 01 1125788999999988 7899999999999999998876655542 23555777
Q ss_pred ecCCcEEEeecCCCeEEEEeccccchhhhhccC--cCCcceEEEEecCCCCeEEEeeCCCcEEEEEecC
Q psy18231 425 TRDCQCILTCSTDECLRLFDKATGELLEEYKGH--KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491 (540)
Q Consensus 425 sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~ 491 (540)
+|++++ +++.|+.|++||+.+++.+..+.+| ...+..+ +|+|++++|++|+ ||.|++||+++
T Consensus 319 s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~--~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 319 YPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLN--KFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp BCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEE--EECTTSSEEEEEE-TTEEEEEECC-
T ss_pred cCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEE--EEecCccEEEEec-CCcEEEEecCC
Confidence 888877 8889999999999999999998874 4555555 8999999999997 99999999864
No 91
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=285.34 Aligned_cols=276 Identities=18% Similarity=0.235 Sum_probs=239.2
Q ss_pred ceeccccchhhhhhcccccceeeeecccccce---eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeec
Q psy18231 128 LLFSLPRTITRILYELPKEWSIRVYRPLTVNR---ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGG 204 (540)
Q Consensus 128 ~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~ 204 (540)
+.|+++ ...++.++.++.|++|+..+... ...|.+.|.+++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 38 ~~~s~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~- 113 (369)
T 3zwl_B 38 VKYNKE---GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK- 113 (369)
T ss_dssp EEECTT---SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-
T ss_pred EEEcCC---CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-
Confidence 444544 34566778899999999876542 34599999999999999999999999999999999999999888
Q ss_pred CCcceeEEEEeeCCCeEEEeeCC-----CeEEEEEcCCCc-----------eeEeccccCC--ceeEEEECCCCCEEEEe
Q psy18231 205 HAHEVNDATAACDSSQIASGASD-----KSVILWEVTTGQ-----------PVRRWREHAS--KVTCVKFNEDSSVVISG 266 (540)
Q Consensus 205 h~~~v~~l~~sp~~~~l~s~s~d-----g~i~iwd~~~~~-----------~~~~~~~h~~--~v~~~~~~~~~~~l~s~ 266 (540)
|...|.+++|+|++++|++++.+ +.|++||+..+. .+..+..|.. .+.+++|+|++++|+++
T Consensus 114 ~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 114 SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 89999999999999999999999 999999998764 3344455666 99999999999999999
Q ss_pred cCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeecccee
Q psy18231 267 SQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHL 346 (540)
Q Consensus 267 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (540)
+.||.|++||+++...
T Consensus 194 ~~dg~i~i~d~~~~~~---------------------------------------------------------------- 209 (369)
T 3zwl_B 194 HKDGKISKYDVSNNYE---------------------------------------------------------------- 209 (369)
T ss_dssp ETTSEEEEEETTTTTE----------------------------------------------------------------
T ss_pred cCCCEEEEEECCCCcE----------------------------------------------------------------
Confidence 9999999999987321
Q ss_pred EEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC-CceEEEE
Q psy18231 347 MVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG-EPIVDAC 423 (540)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~i~~~~ 423 (540)
....+..|...|.+++|+| .+|++++.|+.|++||+++++.+..+.. ..+.+++
T Consensus 210 -----------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 266 (369)
T 3zwl_B 210 -----------------------YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAV 266 (369)
T ss_dssp -----------------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred -----------------------eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEE
Confidence 1114456788999999998 7899999999999999999998888864 6899999
Q ss_pred EecCCcEEEeecCCC--------------eEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEe
Q psy18231 424 FTRDCQCILTCSTDE--------------CLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489 (540)
Q Consensus 424 ~sp~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~ 489 (540)
|+|+++++++++.++ .+++||..+++.+..+.+|...|..+ +|+|++++|++++.||.|++|++
T Consensus 267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~--~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 267 ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTV--AISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp ECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEE--EECTTSSEEEEEETTSEEEEEEE
T ss_pred ecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEE--EECCCCCEEEEEcCCCeEEEEEC
Confidence 999999999999988 89999999999999999999999888 89999999999999999999999
Q ss_pred cCCccee
Q psy18231 490 VDSSQIS 496 (540)
Q Consensus 490 ~~~~~~~ 496 (540)
.++....
T Consensus 345 ~~~~~~~ 351 (369)
T 3zwl_B 345 EKSYFDF 351 (369)
T ss_dssp CHHHHTC
T ss_pred ccccchh
Confidence 8765443
No 92
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.8e-36 Score=294.46 Aligned_cols=279 Identities=15% Similarity=0.183 Sum_probs=218.5
Q ss_pred cceeccccchhhhhhcccccceeeeecccccc-----eeeeeecCeEEEEeCC-CCCEEEEeeCCCcEEEEcCCCCeeEE
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRPLTVN-----RELFVLSGLMHTRFPV-DGSYCLTCGSDKKIKLWNPYRNLLLK 200 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~h~~~v~~v~~sp-dg~~lat~~~dg~i~iwd~~~~~~~~ 200 (540)
.+.|+|. ...+++.++.+++|++|+..... ...+|.+.|++++|+| ++++|++|+.||+|++||++++....
T Consensus 124 ~l~~~P~--~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 124 SLAWHPT--HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRV 201 (435)
T ss_dssp EEEECSS--CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEE
T ss_pred EEEEeCC--CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeE
Confidence 4455543 34577889999999999986543 2246999999999998 78999999999999999998765544
Q ss_pred Eeec--CCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCC-EEEEecCCCcEEEEEe
Q psy18231 201 TYGG--HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS-VVISGSQDNTVMMWDV 277 (540)
Q Consensus 201 ~~~~--h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~ 277 (540)
.... +...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++++.|++|++||+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~ 280 (435)
T 4e54_B 202 FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDL 280 (435)
T ss_dssp EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEET
T ss_pred EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEec
Confidence 4333 34467899999999999999999999999985 566778899999999999999875 7889999999999999
Q ss_pred cCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeeccccee
Q psy18231 278 KSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQ 357 (540)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (540)
++.+....
T Consensus 281 ~~~~~~~~------------------------------------------------------------------------ 288 (435)
T 4e54_B 281 RQVRGKAS------------------------------------------------------------------------ 288 (435)
T ss_dssp TTCCSSSC------------------------------------------------------------------------
T ss_pred ccccccce------------------------------------------------------------------------
Confidence 87652111
Q ss_pred cccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeCC--------ceEEEEEecC
Q psy18231 358 IGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVGE--------PIVDACFTRD 427 (540)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------~i~~~~~sp~ 427 (540)
+....+|...|.+++|+| .+|++++.||.|++||+.+++....+..+ .+....|+|+
T Consensus 289 -------------~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (435)
T 4e54_B 289 -------------FLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPR 355 (435)
T ss_dssp -------------CSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSS
T ss_pred -------------EEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCC
Confidence 113357889999999998 79999999999999999998877665431 2334566666
Q ss_pred CcEEEeec------------CCCeEEEEeccccchhhhhc-cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc
Q psy18231 428 CQCILTCS------------TDECLRLFDKATGELLEEYK-GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 428 ~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~ 494 (540)
+.++++++ .++.|++||..+++.+..+. +|...|.++. +|+|+|++|++|+ |++|+|||+++++.
T Consensus 356 ~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~-~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 356 YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLN-EFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEE-EECTTSSCEEEEC-SSEEEECCCC----
T ss_pred CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEE-EECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 66665543 34679999999999887764 6777777763 6999999999886 78999999998875
Q ss_pred e
Q psy18231 495 I 495 (540)
Q Consensus 495 ~ 495 (540)
.
T Consensus 434 r 434 (435)
T 4e54_B 434 R 434 (435)
T ss_dssp -
T ss_pred e
Confidence 3
No 93
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=288.12 Aligned_cols=317 Identities=15% Similarity=0.180 Sum_probs=228.5
Q ss_pred hhhhhcccccceeeeecccccce--ee--------------eeecCeEEEEeCC-CCCEEEEeeCCCcEEEEcCCCCeeE
Q psy18231 137 TRILYELPKEWSIRVYRPLTVNR--EL--------------FVLSGLMHTRFPV-DGSYCLTCGSDKKIKLWNPYRNLLL 199 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~~--~~--------------~h~~~v~~v~~sp-dg~~lat~~~dg~i~iwd~~~~~~~ 199 (540)
...++.++.++.|++|+..+... .. .|...|.+++|+| ++++|++++.||.|++||+.+++..
T Consensus 56 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 135 (408)
T 4a11_B 56 GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA 135 (408)
T ss_dssp CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc
Confidence 45667788899999999876432 11 3999999999999 7889999999999999999999988
Q ss_pred EEeecCCcceeEEEEeeC---CCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCC-EEEEecCCCcEEEE
Q psy18231 200 KTYGGHAHEVNDATAACD---SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS-VVISGSQDNTVMMW 275 (540)
Q Consensus 200 ~~~~~h~~~v~~l~~sp~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iw 275 (540)
..+. +...+.++.|+|. +.++++++.|+.|++||+++++.+..+..|...|.+++|+|+++ +|++++.||.|++|
T Consensus 136 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~ 214 (408)
T 4a11_B 136 DVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLW 214 (408)
T ss_dssp EEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred eecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEE
Confidence 8887 7889999999984 45999999999999999999999999999999999999999988 58999999999999
Q ss_pred EecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccc
Q psy18231 276 DVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGS 355 (540)
Q Consensus 276 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (540)
|+++...........
T Consensus 215 d~~~~~~~~~~~~~~----------------------------------------------------------------- 229 (408)
T 4a11_B 215 DVRRASGCLITLDQH----------------------------------------------------------------- 229 (408)
T ss_dssp ETTCSSCCSEECCTT-----------------------------------------------------------------
T ss_pred ECCCCCccccccccc-----------------------------------------------------------------
Confidence 998765211110000
Q ss_pred eecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC-------CceEEEEEec
Q psy18231 356 TQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG-------EPIVDACFTR 426 (540)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~~i~~~~~sp 426 (540)
..............|...|.+++|+| .++++++.||.|++||+++++....+.. ..+.......
T Consensus 230 -------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (408)
T 4a11_B 230 -------NGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCG 302 (408)
T ss_dssp -------TTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCS
T ss_pred -------ccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecC
Confidence 00000111224467899999999998 7899999999999999999876554432 1222223334
Q ss_pred CCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEeccccee
Q psy18231 427 DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 506 (540)
Q Consensus 427 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 506 (540)
.+..+++++.++.|++||+.+++.+..+.+|...|..+ +|+|++++|++++.||.|++||+.+++.+.... .+.
T Consensus 303 ~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~--~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~--~~~-- 376 (408)
T 4a11_B 303 CSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCC--VFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD--ETT-- 376 (408)
T ss_dssp SSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEE--EEETTTTEEEEEETTSCEEEEEECC---------------
T ss_pred CCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEE--EEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC--ceE--
Confidence 45667777889999999999999999999999999888 899999999999999999999999998876654 222
Q ss_pred eeEEEEcCC-CcEEEeec-CCeeEEEEcc
Q psy18231 507 VNSLCSHPT-RKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 507 v~~l~~s~d-~~~l~s~~-d~~i~iw~~~ 533 (540)
....+.+. ...+.+++ |+.+++|+..
T Consensus 377 -~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 377 -TKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp -----------------------------
T ss_pred -eccccccccceeecccCccCceeecCCc
Confidence 11233333 23344455 9999999865
No 94
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-36 Score=287.86 Aligned_cols=251 Identities=16% Similarity=0.206 Sum_probs=211.3
Q ss_pred CeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcC--CCceeEeccccCCceeEEEECCC--CCEEEEecCCCc
Q psy18231 196 NLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT--TGQPVRRWREHASKVTCVKFNED--SSVVISGSQDNT 271 (540)
Q Consensus 196 ~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~ 271 (540)
|+++..+.+|.+.|++++|+|++++|++++.||.|++||+. +++.+..+.+|...|.+++|+++ +++|++++.||.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 34566788999999999999999999999999999999998 56777888999999999999987 899999999999
Q ss_pred EEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEee
Q psy18231 272 VMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD 351 (540)
Q Consensus 272 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (540)
|++||+.+++...
T Consensus 81 v~iwd~~~~~~~~------------------------------------------------------------------- 93 (379)
T 3jrp_A 81 VLIWKEENGRWSQ------------------------------------------------------------------- 93 (379)
T ss_dssp EEEEEEETTEEEE-------------------------------------------------------------------
T ss_pred EEEEEcCCCceeE-------------------------------------------------------------------
Confidence 9999998764111
Q ss_pred cccceecccccccccccchhhhhhcccccEEEEEecC----CeeEeeeCCCeEEEEeCCCCce--EEeee--CCceEEEE
Q psy18231 352 FLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD----HEILTASLDCRIRRYDIRTGNL--VTDYV--GEPIVDAC 423 (540)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~l~~~~~dg~i~iwd~~~~~~--~~~~~--~~~i~~~~ 423 (540)
...+..|...|.+++|+| ..+++++.|+.|++||++++.. ...+. ...|.+++
T Consensus 94 -------------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 94 -------------------IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp -------------------EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEE
T ss_pred -------------------eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEE
Confidence 114456888999999997 4799999999999999998743 23333 36899999
Q ss_pred Eec-------------CCcEEEeecCCCeEEEEeccccc----hhhhhccCcCCcceEEEEecCC---CCeEEEeeCCCc
Q psy18231 424 FTR-------------DCQCILTCSTDECLRLFDKATGE----LLEEYKGHKSGDFRIECCLDSK---DSQIFCGSSDGK 483 (540)
Q Consensus 424 ~sp-------------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~s~~---~~~l~s~s~dg~ 483 (540)
|+| ++++|++++.|+.|++||+++++ .+..+.+|...+.++ +|+|+ +++|++++.||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~--~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV--AWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp ECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE--EECCCCSSSEEEEEEETTSC
T ss_pred EcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE--EECCCCCCCCeEEEEeCCCE
Confidence 999 69999999999999999998764 446778899988888 89999 899999999999
Q ss_pred EEEEEecCCcce---eEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEccc
Q psy18231 484 IYKWQLVDSSQI---STLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEE 534 (540)
Q Consensus 484 i~iwd~~~~~~~---~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~ 534 (540)
|++||+.++... ..+....|...|.+++|+|++++|++++ ||.|++|++..
T Consensus 233 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 233 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 999999887532 2222224888999999999999999999 99999999974
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-35 Score=286.94 Aligned_cols=282 Identities=16% Similarity=0.155 Sum_probs=229.5
Q ss_pred eecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe---eEEEeec-----------------------------------
Q psy18231 163 VLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL---LLKTYGG----------------------------------- 204 (540)
Q Consensus 163 h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~---~~~~~~~----------------------------------- 204 (540)
...++.+++|+|||++|+++. ++.|++||+.+++ .+..+..
T Consensus 3 ~~~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 3 VIHPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp EECCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred ccccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 346889999999999776664 7899999999998 6666553
Q ss_pred -------------------CCcceeEEEEeeCCCeE-EEeeCCCeEEEEEcC--CCceeEecc--ccCCceeEEEECCCC
Q psy18231 205 -------------------HAHEVNDATAACDSSQI-ASGASDKSVILWEVT--TGQPVRRWR--EHASKVTCVKFNEDS 260 (540)
Q Consensus 205 -------------------h~~~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~--~~~~~~~~~--~h~~~v~~~~~~~~~ 260 (540)
|.+.|++++|+|++++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC
Confidence 33379999999999996 899999999999999 888888876 567899999999999
Q ss_pred CEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeee
Q psy18231 261 SVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVL 340 (540)
Q Consensus 261 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (540)
++|++++.||.|++|++.+......
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~------------------------------------------------------- 186 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKF------------------------------------------------------- 186 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSC-------------------------------------------------------
T ss_pred CEEEEEeCCCcEEEEecCCcccccc-------------------------------------------------------
Confidence 9999999999999999987652110
Q ss_pred eccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCC-----eeEeeeCCCeEEEEeCCCCceEEeee
Q psy18231 341 MSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDH-----EILTASLDCRIRRYDIRTGNLVTDYV 415 (540)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~l~~~~~dg~i~iwd~~~~~~~~~~~ 415 (540)
....+.+|...|.+++|+|. +|++++.|+.|++||+++++.+..+.
T Consensus 187 -----------------------------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 187 -----------------------------TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp -----------------------------CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC
T ss_pred -----------------------------cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee
Confidence 01145678899999999986 89999999999999999998887733
Q ss_pred ---CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccC-------------------------cCCcceEEEE
Q psy18231 416 ---GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH-------------------------KSGDFRIECC 467 (540)
Q Consensus 416 ---~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------------------~~~v~~~~~~ 467 (540)
...|.+++|+ ++++|++++.|+.|++||+.+++.+..+..+ ...+..+ +
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--~ 314 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKI--I 314 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEE--E
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEE--E
Confidence 3689999999 9999999999999999999999877666532 2234444 8
Q ss_pred ecCCCCeEEEee-CCCcEEEEEe--cCC---cceeEEEecccceeeeEEEEcCCCcEEEeec-C------CeeEEEEccc
Q psy18231 468 LDSKDSQIFCGS-SDGKIYKWQL--VDS---SQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-G------NNVKLWTAEE 534 (540)
Q Consensus 468 ~s~~~~~l~s~s-~dg~i~iwd~--~~~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d------~~i~iw~~~~ 534 (540)
|+|++++|++++ .|+.|++|++ .++ +.+..+. .| ..|.+++|+|++.++++++ + ..|.+|.+..
T Consensus 315 ~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~--~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT--FP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp ECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE--CS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred EeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec--cC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 999999999998 8999999999 555 5566666 56 7899999999654444443 3 3479998764
Q ss_pred c
Q psy18231 535 D 535 (540)
Q Consensus 535 ~ 535 (540)
+
T Consensus 392 ~ 392 (450)
T 2vdu_B 392 N 392 (450)
T ss_dssp T
T ss_pred C
Confidence 3
No 96
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=284.32 Aligned_cols=312 Identities=15% Similarity=0.172 Sum_probs=241.2
Q ss_pred cceeccccchhhhhhcccccceeeeecc----cccc--------eeee-----------eecCeEEEEeCCCCCEEEEee
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRP----LTVN--------RELF-----------VLSGLMHTRFPVDGSYCLTCG 183 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~----~~~~--------~~~~-----------h~~~v~~v~~spdg~~lat~~ 183 (540)
.+.|+++. ..+++.++.++.|++|+. .+.. .... |.+.|++++|+|++++|++++
T Consensus 50 ~~~~s~~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 127 (425)
T 1r5m_A 50 SSTWNPLD--ESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV 127 (425)
T ss_dssp EEEECSSC--TTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCC--CcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEe
Confidence 44555553 336677888999999998 5543 1111 577999999999999999999
Q ss_pred CCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCc-------------
Q psy18231 184 SDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK------------- 250 (540)
Q Consensus 184 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~------------- 250 (540)
.||.|++|| .+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..+...
T Consensus 128 ~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (425)
T 1r5m_A 128 ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDG 206 (425)
T ss_dssp TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------C
T ss_pred CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCc
Confidence 999999999 788889999999999999999999999999999999999999999999888887776
Q ss_pred --eeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeee
Q psy18231 251 --VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFR 328 (540)
Q Consensus 251 --v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (540)
+.++.|++++ .+++++.||.|++||+++++..... ..+...+..+ .+.+.+
T Consensus 207 ~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~--------~~~~~~i~~~---~~~~~~--------------- 259 (425)
T 1r5m_A 207 SLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKL--------IGHHGPISVL---EFNDTN--------------- 259 (425)
T ss_dssp CCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEE--------CCCSSCEEEE---EEETTT---------------
T ss_pred ceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeee--------ccCCCceEEE---EECCCC---------------
Confidence 9999999875 5888899999999999876521111 0111111111 111100
Q ss_pred ecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-CeeEeeeCCCeEEEEeCCC
Q psy18231 329 CKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-HEILTASLDCRIRRYDIRT 407 (540)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~dg~i~iwd~~~ 407 (540)
...+....++.+.+|+.... .....+..|...|.+++|+| ..+++++.|+.|++||+++
T Consensus 260 -------~~l~~~~~d~~i~i~d~~~~-------------~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~ 319 (425)
T 1r5m_A 260 -------KLLLSASDDGTLRIWHGGNG-------------NSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQ 319 (425)
T ss_dssp -------TEEEEEETTSCEEEECSSSB-------------SCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTT
T ss_pred -------CEEEEEcCCCEEEEEECCCC-------------ccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCC
Confidence 01112223444444443322 12335567889999999999 6999999999999999999
Q ss_pred CceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccc--------------------hhhhhccCcC--Ccce
Q psy18231 408 GNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGE--------------------LLEEYKGHKS--GDFR 463 (540)
Q Consensus 408 ~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~--------------------~~~~~~~~~~--~v~~ 463 (540)
++.+..+.. ..+.+++|+|++++|++++.||.|++||+.+++ .+..+..|.. .+..
T Consensus 320 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 399 (425)
T 1r5m_A 320 NTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFD 399 (425)
T ss_dssp TEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEE
T ss_pred CcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEE
Confidence 998888765 589999999999999999999999999999888 7888888876 7777
Q ss_pred EEEEecCCCCeEEEeeCCCcEEEEEec
Q psy18231 464 IECCLDSKDSQIFCGSSDGKIYKWQLV 490 (540)
Q Consensus 464 ~~~~~s~~~~~l~s~s~dg~i~iwd~~ 490 (540)
+ +|+|++++|++++.||.|++||++
T Consensus 400 ~--~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 400 L--SWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp E--EECTTSSEEEEEESSSCCEEEECC
T ss_pred E--EccCCCceEEEEecCceEEEEeec
Confidence 7 899999999999999999999975
No 97
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=9.6e-35 Score=276.77 Aligned_cols=276 Identities=11% Similarity=0.118 Sum_probs=213.9
Q ss_pred eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeE-EEeeCCCeEEEEEcCCCc
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI-ASGASDKSVILWEVTTGQ 239 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~~~~ 239 (540)
..|.+.|.+++|+|||++||+|+.++ ++|||+.+++....... ..+..+++.++++.+ ++++.|++|++||+.+++
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence 46899999999999999999998665 78999988877665442 358888999988887 567888999999999999
Q ss_pred eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCC-CCCCcchhhhhHhhhhcCCceeEEEEeecccccccccC
Q psy18231 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR-SHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNG 318 (540)
Q Consensus 240 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
.+..+. |...|.++.|+++. ++++ .|+.|++||+.+. +. +.
T Consensus 93 ~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~--~~-------------------------------- 134 (355)
T 3vu4_A 93 DVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKR--IT-------------------------------- 134 (355)
T ss_dssp EEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCB--SS--------------------------------
T ss_pred EEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCcee--eE--------------------------------
Confidence 988886 67799999998764 4444 3789999999876 31 00
Q ss_pred ceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEe--eeC
Q psy18231 319 LLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILT--ASL 396 (540)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~--~~~ 396 (540)
.+.. ....+++++..+++ |+.
T Consensus 135 ------------------------------------------------------~~~~---~~~~~~~s~~~la~~sg~~ 157 (355)
T 3vu4_A 135 ------------------------------------------------------DDIR---FGGVCEFSNGLLVYSNEFN 157 (355)
T ss_dssp ------------------------------------------------------CCEE---EEEEEEEETTEEEEEESSC
T ss_pred ------------------------------------------------------Eecc---CCceEEEEccEEEEeCCCc
Confidence 1111 22233444566666 689
Q ss_pred CCeEEEEeCCCCc----------------eEEeeeC--CceEEEEEecCCcEEEeecCCCe-EEEEeccccchhhhhc-c
Q psy18231 397 DCRIRRYDIRTGN----------------LVTDYVG--EPIVDACFTRDCQCILTCSTDEC-LRLFDKATGELLEEYK-G 456 (540)
Q Consensus 397 dg~i~iwd~~~~~----------------~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~-~ 456 (540)
||.|++||+++++ .+..+.+ ..|.+++|+|+|++|++++.|++ |++||+++++.+.++. +
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g 237 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG 237 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 9999999999865 1445544 58999999999999999999998 9999999999999998 5
Q ss_pred -CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCccee--E------------------EEe-cccceeeeEEEEcC
Q psy18231 457 -HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIS--T------------------LIH-SVGKAVVNSLCSHP 514 (540)
Q Consensus 457 -~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~--~------------------~~~-~~~~~~v~~l~~s~ 514 (540)
|...|.++ +|+|++++|++++.|++|++||+.++.... . +.. ..+......++|++
T Consensus 238 ~h~~~v~~~--~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 315 (355)
T 3vu4_A 238 LDRADVVDM--KWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWIS 315 (355)
T ss_dssp TCCSCEEEE--EECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESS
T ss_pred CCCCcEEEE--EECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeC
Confidence 89888888 899999999999999999999997653211 1 110 01122347799999
Q ss_pred CCcEEEeec-CCeeEEEEccccc
Q psy18231 515 TRKHIMSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 515 d~~~l~s~~-d~~i~iw~~~~~~ 536 (540)
|+++|++++ ||.+++|++..+.
T Consensus 316 d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 316 ESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp SSEEEEEETTTTEEEEEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEEEEcCC
Confidence 999999999 9999999987653
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-36 Score=290.37 Aligned_cols=241 Identities=12% Similarity=0.114 Sum_probs=201.0
Q ss_pred eecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC--ceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecC
Q psy18231 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG--QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279 (540)
Q Consensus 202 ~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 279 (540)
++.+.+.|++++|+|++++|++++.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.||+|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 4456789999999999999999999999999999988 77888999999999999999999999999999999999987
Q ss_pred CC-CCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceec
Q psy18231 280 RS-HHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQI 358 (540)
Q Consensus 280 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (540)
++ ..+
T Consensus 87 ~~~~~~-------------------------------------------------------------------------- 92 (377)
T 3dwl_C 87 DGTWKQ-------------------------------------------------------------------------- 92 (377)
T ss_dssp --CCCC--------------------------------------------------------------------------
T ss_pred CCceee--------------------------------------------------------------------------
Confidence 64 101
Q ss_pred ccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCce---EEeee---CCceEEEEEecCCcE
Q psy18231 359 GDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNL---VTDYV---GEPIVDACFTRDCQC 430 (540)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~---~~~~~---~~~i~~~~~sp~~~~ 430 (540)
...+..|...|.+++|+| +.+++++.|+.|++||+++++. ...+. ...|.+++|+|++++
T Consensus 93 ------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 93 ------------TLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp ------------EEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred ------------eeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 114557889999999998 7899999999999999998863 55554 357999999999999
Q ss_pred EEeecCCCeEEEEecc------------------ccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCC
Q psy18231 431 ILTCSTDECLRLFDKA------------------TGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS 492 (540)
Q Consensus 431 l~~~~~dg~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~ 492 (540)
|++++.|+.|++||+. .++++..+ +|...+.++ +|+|++++|++++.||.|++||+.++
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~--~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAV--GFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEE--EECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEE--EECCCCCEEEEEeCCCcEEEEECCCC
Confidence 9999999999999985 45566677 888888888 89999999999999999999999999
Q ss_pred cc----eeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEcc
Q psy18231 493 SQ----ISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533 (540)
Q Consensus 493 ~~----~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~ 533 (540)
+. +..+. .|...|.+++|+|++++|++++++.+.+|+..
T Consensus 238 ~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 238 EQPPRALITVK--LSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp TSCEEECCCEE--CSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred CCcceeeEeec--CCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 88 77777 89999999999999999999994444466654
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=310.27 Aligned_cols=290 Identities=14% Similarity=0.170 Sum_probs=235.7
Q ss_pred eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCC--CCeeEEEeecCCcceeEEEEeeC--CCeEEEeeCCCeEEEEEc
Q psy18231 160 ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPY--RNLLLKTYGGHAHEVNDATAACD--SSQIASGASDKSVILWEV 235 (540)
Q Consensus 160 ~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~i~iwd~ 235 (540)
..+|.++|++++|+|+|++|++|+.||+|+|||+. +++.+..+.+|.+.|++++|+|+ +++|++|+.||+|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 35799999999999999999999999999999987 56778889999999999999998 999999999999999999
Q ss_pred CCCc--eeEeccccCCceeEEEECCC--CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccc
Q psy18231 236 TTGQ--PVRRWREHASKVTCVKFNED--SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKST 311 (540)
Q Consensus 236 ~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (540)
.+++ .+..+.+|...|.+++|+|+ ++++++|+.||.|++||+++.......
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~------------------------- 139 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI------------------------- 139 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-------------------------
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-------------------------
Confidence 9987 67778899999999999999 999999999999999999876421111
Q ss_pred ccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---
Q psy18231 312 KNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--- 388 (540)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--- 388 (540)
.+..|...|.+++|+|
T Consensus 140 -------------------------------------------------------------~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 140 -------------------------------------------------------------IIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp -------------------------------------------------------------EEECCSSCEEEEEECCCC-
T ss_pred -------------------------------------------------------------EeecCCCceEEEEecCccc
Confidence 3346778888888876
Q ss_pred ------------CeeEeeeCCCeEEEEeCCCCc----eEEeeeC--CceEEEEEecC---CcEEEeecCCCeEEEEeccc
Q psy18231 389 ------------HEILTASLDCRIRRYDIRTGN----LVTDYVG--EPIVDACFTRD---CQCILTCSTDECLRLFDKAT 447 (540)
Q Consensus 389 ------------~~l~~~~~dg~i~iwd~~~~~----~~~~~~~--~~i~~~~~sp~---~~~l~~~~~dg~i~i~d~~~ 447 (540)
..+++++.||.|++||++++. ....+.+ ..|.+++|+|+ +++|++++.||.|++||+.+
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 579999999999999998773 3444443 57999999999 99999999999999999988
Q ss_pred cc-----hhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCccee--------------------EEEe--
Q psy18231 448 GE-----LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIS--------------------TLIH-- 500 (540)
Q Consensus 448 ~~-----~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~--------------------~~~~-- 500 (540)
++ .+.....|...++.+ +|+|+|++|++|+.||.|++||+.++.... .+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l--~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 316 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRA--SWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVHQGGGGSGGGGATSKEFDGPC 316 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCE--EECTTTCCEEEECSSSCEECCBCCSSSCCBCCCCBC--------------------
T ss_pred CCCcceeEEeccCCCCCceEEE--EEcCCCCEEEEEcCCCEEEEEecCCCCCcccccccccccCCCCCCccccccccCcC
Confidence 64 444556688888888 899999999999999999999987422100 0000
Q ss_pred ------------------------cccceeeeEEEEcCCCcEEEeec--CCeeEEEEcccccC
Q psy18231 501 ------------------------SVGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAEEDYG 537 (540)
Q Consensus 501 ------------------------~~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~~~~~ 537 (540)
.....++..+.|++||++|+.+. ...+++..+...+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~k~i~~~~rl~s~~~~~~fs~dg~lL~~~~~~~~~~~~~~~ps~~~ 379 (753)
T 3jro_A 317 QNEIDLLFSECNDEIDNAKLIMKERRFTASYTFAKFSTGSMLLTKDIVGKSGVSIKRLPTELQ 379 (753)
T ss_dssp --------------CCSHHHHHHTTTCCSCCCCCCBCTTSCBCEECSSSTTSEECCCCCCCCC
T ss_pred CchhhhhhcccccchHHHHHHHHHhhccCCcceeEeCCCCeeeeccCCCccceEEeecccccc
Confidence 00112356688999999998777 34577777665543
No 100
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.9e-35 Score=281.01 Aligned_cols=243 Identities=16% Similarity=0.177 Sum_probs=215.6
Q ss_pred eecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc--eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecC
Q psy18231 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ--PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279 (540)
Q Consensus 202 ~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 279 (540)
+..|.++|++++|+|++++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45589999999999999999999999999999999987 8888999999999999999999999999999999999976
Q ss_pred CCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecc
Q psy18231 280 RSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359 (540)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (540)
++....
T Consensus 84 ~~~~~~-------------------------------------------------------------------------- 89 (372)
T 1k8k_C 84 RTWKPT-------------------------------------------------------------------------- 89 (372)
T ss_dssp TEEEEE--------------------------------------------------------------------------
T ss_pred Ceeeee--------------------------------------------------------------------------
Confidence 541000
Q ss_pred cccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCce---EEeee---CCceEEEEEecCCcEE
Q psy18231 360 DVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNL---VTDYV---GEPIVDACFTRDCQCI 431 (540)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~---~~~~~---~~~i~~~~~sp~~~~l 431 (540)
..+..|...|.+++|+| +++++++.|+.|++||++.++. ...+. ...|.+++|+|++++|
T Consensus 90 ------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 90 ------------LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp ------------EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE
T ss_pred ------------EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEE
Confidence 02346788999999998 7899999999999999998763 23332 3679999999999999
Q ss_pred EeecCCCeEEEEec------------------cccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCc
Q psy18231 432 LTCSTDECLRLFDK------------------ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS 493 (540)
Q Consensus 432 ~~~~~dg~i~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~ 493 (540)
++++.||.|++||+ ..++.+..+..|...+..+ +|+|++++|++++.||.|++||+.+++
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV--CFSANGSRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEE--EECSSSSEEEEEETTTEEEEEEGGGTT
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEE--EECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99999999999995 3667788888899888887 899999999999999999999999999
Q ss_pred ceeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEccc
Q psy18231 494 QISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 534 (540)
Q Consensus 494 ~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~~ 534 (540)
.+..+. .|...|.+++|+|++++|+++.|+.|++|++.+
T Consensus 236 ~~~~~~--~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 236 AVATLA--SETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEE--CSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred eeEEEc--cCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 999998 899999999999999999888899999999987
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-35 Score=288.40 Aligned_cols=270 Identities=13% Similarity=0.137 Sum_probs=219.9
Q ss_pred cceecc-ccchhhhhhcccccceeeeecccc---c-----ceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCC---
Q psy18231 127 PLLFSL-PRTITRILYELPKEWSIRVYRPLT---V-----NRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPY--- 194 (540)
Q Consensus 127 ~~~~s~-~~~~~~~~~~~~~~~~i~~~~~~~---~-----~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~--- 194 (540)
.+.|++ + ...+++++.+++|++|+..+ . .....|.+.|.+++|+|++++|++|+.||+|++||+.
T Consensus 68 ~~~~s~~~---~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 144 (437)
T 3gre_A 68 SSAVSPGE---TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQ 144 (437)
T ss_dssp EEEEECSS---SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEE
T ss_pred EEEECCCC---CCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecccc
Confidence 344555 3 45677889999999999866 2 2344699999999999999999999999999999984
Q ss_pred CCeeEEEeec------------CCcceeEEE--EeeCCCeEEEeeCCCeEEEEEcCCCceeEeccc--cCCceeEEEECC
Q psy18231 195 RNLLLKTYGG------------HAHEVNDAT--AACDSSQIASGASDKSVILWEVTTGQPVRRWRE--HASKVTCVKFNE 258 (540)
Q Consensus 195 ~~~~~~~~~~------------h~~~v~~l~--~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~~ 258 (540)
+++.+..+.+ +...+.++. +++++++|++++.|+.|++||+++++.+..+.. |.+.|.+++|+|
T Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~ 224 (437)
T 3gre_A 145 QESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE 224 (437)
T ss_dssp ETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT
T ss_pred CCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC
Confidence 5544443332 455666666 557899999999999999999999999999988 899999999999
Q ss_pred CCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceee
Q psy18231 259 DSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSG 338 (540)
Q Consensus 259 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (540)
++++|++|+.||.|++||+++++.
T Consensus 225 ~~~~l~s~~~dg~i~iwd~~~~~~-------------------------------------------------------- 248 (437)
T 3gre_A 225 ECCVLILGTTRGIIDIWDIRFNVL-------------------------------------------------------- 248 (437)
T ss_dssp TSCEEEEEETTSCEEEEETTTTEE--------------------------------------------------------
T ss_pred CCCEEEEEcCCCeEEEEEcCCccE--------------------------------------------------------
Confidence 999999999999999999987541
Q ss_pred eeeccceeEEEeecccceecccccccccccchhhhhh-cccccEEEEEecC------CeeEeeeCCCeEEEEeCCCCceE
Q psy18231 339 VLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALK-EARDSITSVHVSD------HEILTASLDCRIRRYDIRTGNLV 411 (540)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~------~~l~~~~~dg~i~iwd~~~~~~~ 411 (540)
+..+. .|...|.+++++| .++++++.||.|++||+++++.+
T Consensus 249 --------------------------------~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 296 (437)
T 3gre_A 249 --------------------------------IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQ 296 (437)
T ss_dssp --------------------------------EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEE
T ss_pred --------------------------------EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEE
Confidence 01222 5667899997665 38999999999999999999887
Q ss_pred EeeeC----------------------------CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhcc-------
Q psy18231 412 TDYVG----------------------------EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG------- 456 (540)
Q Consensus 412 ~~~~~----------------------------~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------- 456 (540)
..+.+ ..|.+++|+ ++++|++++.|+.|++||+.+++.+..+.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 375 (437)
T 3gre_A 297 YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDV 375 (437)
T ss_dssp EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCE
T ss_pred EEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCce
Confidence 77653 238889999 789999999999999999999987776665
Q ss_pred ------------------------------CcCCcceEEEEecCCCCeEEEeeCCCcEEEEE
Q psy18231 457 ------------------------------HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488 (540)
Q Consensus 457 ------------------------------~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd 488 (540)
|...|.++.+...+++.+|++|+.||.|+||+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 376 FIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 77888888444333478999999999999995
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.4e-35 Score=287.17 Aligned_cols=274 Identities=19% Similarity=0.329 Sum_probs=223.6
Q ss_pred hhhhhcccccceeeeecccccce---eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEE
Q psy18231 137 TRILYELPKEWSIRVYRPLTVNR---ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~~---~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 213 (540)
...++.++.++.|++|+..+... ..+|.+.|.+++| ++++|++|+.||+|++||+.+++.+..+.+|...|.+++
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 220 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 220 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 34567788999999999877542 3469999999999 788999999999999999999999999999999999999
Q ss_pred EeeCCCeEEEeeCCCeEEEEEcCCCcee---EeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhh
Q psy18231 214 AACDSSQIASGASDKSVILWEVTTGQPV---RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290 (540)
Q Consensus 214 ~sp~~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 290 (540)
|+ +.++++++.||.|++||+.+++.. ..+.+|...|.+++| +++++++++.||.|++||+++++.
T Consensus 221 ~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~-------- 288 (435)
T 1p22_A 221 FN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF-------- 288 (435)
T ss_dssp CC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE--------
T ss_pred Ec--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE--------
Confidence 97 469999999999999999988765 667899999999999 678999999999999999987651
Q ss_pred hHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccch
Q psy18231 291 NEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSC 370 (540)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (540)
T Consensus 289 -------------------------------------------------------------------------------- 288 (435)
T 1p22_A 289 -------------------------------------------------------------------------------- 288 (435)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEecccc
Q psy18231 371 FQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATG 448 (540)
Q Consensus 371 ~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~ 448 (540)
+..+.+|...|.++.++++.+++++.||.|++||+++++.+..+.+ ..|.+++| ++++|++|+.||.|++||+.++
T Consensus 289 ~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 289 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHH
T ss_pred EEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCC
Confidence 1144578889999999999999999999999999999999988875 46888888 7899999999999999999877
Q ss_pred c---------hhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEc
Q psy18231 449 E---------LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 513 (540)
Q Consensus 449 ~---------~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 513 (540)
+ .+..+.+|...|.++ +| ++++|++|+.||+|++||+.+........ ...+..++.|.
T Consensus 367 ~~~~~~~~~~~~~~~~~h~~~v~~l--~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~ 433 (435)
T 1p22_A 367 LDPRAPAGTLCLRTLVEHSGRVFRL--QF--DEFQIVSSSHDDTILIWDFLNDPAAQAEP---PRSPSRTYTYI 433 (435)
T ss_dssp TSTTSCTTTTEEEEECCCSSCCCCE--EE--CSSCEEECCSSSEEEEEC-------------------------
T ss_pred CCccccccchheeeccCCCCCeEEE--Ee--CCCEEEEEeCCCEEEEEECCCCCCcccCC---CCCCccceeee
Confidence 6 677888999999988 56 78899999999999999998876655543 33445555554
No 103
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-35 Score=284.90 Aligned_cols=254 Identities=9% Similarity=0.039 Sum_probs=207.0
Q ss_pred ecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEe
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRR 243 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 243 (540)
...|.+++|||||+++|+++.|++|+ |...++ .+++|...|.+++|+|+| .++.+.+|+. +....
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~---~~~~~ 79 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE-------FENKLDFELA---QQNGL 79 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC-------CCCTTTTSCC---CSSCS
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC-------CcceEEEEeC---CCceE
Confidence 47899999999999999999999999 765554 447999999999999998 4555555554 32223
Q ss_pred cc-ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceee
Q psy18231 244 WR-EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTK 322 (540)
Q Consensus 244 ~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (540)
+. .|...|.+++|+|+|.+|++++.||.|++||... ..
T Consensus 80 ~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l------------------------------------- 118 (588)
T 2j04_A 80 LNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----ML------------------------------------- 118 (588)
T ss_dssp STTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EE-------------------------------------
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----ee-------------------------------------
Confidence 33 5688999999999999999999999999999432 00
Q ss_pred EEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhccc-----ccEEEEEecC--CeeEeee
Q psy18231 323 LVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEAR-----DSITSVHVSD--HEILTAS 395 (540)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~l~~~~--~~l~~~~ 395 (540)
..+. |. ..+.+++|+| ++|++|+
T Consensus 119 -------------------------------------------------~~l~-~~~~~~~~sv~svafSPDG~~LAsgs 148 (588)
T 2j04_A 119 -------------------------------------------------TNLD-SKGNLSSRTYHCFEWNPIESSIVVGN 148 (588)
T ss_dssp -------------------------------------------------EECC-CSSCSTTTCEEEEEECSSSSCEEEEE
T ss_pred -------------------------------------------------eecc-CCCccccccEEEEEEcCCCCEEEEEc
Confidence 0122 33 3589999999 9999999
Q ss_pred CCCeEEEEeCCCCce-------EEeee------CCceEEEEEecCCcEEEeecCCCeEEEEeccccchh---hhh-ccCc
Q psy18231 396 LDCRIRRYDIRTGNL-------VTDYV------GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELL---EEY-KGHK 458 (540)
Q Consensus 396 ~dg~i~iwd~~~~~~-------~~~~~------~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~---~~~-~~~~ 458 (540)
.||+|++||+.+++. +..+. ...|.+++|+|+| +++++.|+.|++||+..++.. .++ .+|.
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASR 226 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCS
T ss_pred CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccccc
Confidence 999999999998863 45553 1479999999999 888899999999999887742 456 4788
Q ss_pred CCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEE--cCCCcEEEeec-CCeeEEEEcc
Q psy18231 459 SGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS--HPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 459 ~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~--s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
..|..+ +|+ |+.||+++ +++|++||+.+++...... +|.+.|.+++| +||+..|++++ ||+ ++|..+
T Consensus 227 ~~V~sv--aFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~--gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 227 RKITDL--KIV--DYKVVLTC-PGYVHKIDLKNYSISSLKT--GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp SCCCCE--EEE--TTEEEEEC-SSEEEEEETTTTEEEEEEC--SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred CcEEEE--EEE--CCEEEEEe-CCeEEEEECCCCeEEEEEc--CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 889888 677 68899997 6999999988777644444 79999999999 99999999999 999 999874
No 104
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-34 Score=268.57 Aligned_cols=244 Identities=20% Similarity=0.288 Sum_probs=214.4
Q ss_pred CeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEE
Q psy18231 196 NLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275 (540)
Q Consensus 196 ~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 275 (540)
.+....+.+|.+.|++++| |++++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.||.|++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 3778889999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccc
Q psy18231 276 DVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGS 355 (540)
Q Consensus 276 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (540)
++.......
T Consensus 87 ~~~~~~~~~----------------------------------------------------------------------- 95 (313)
T 3odt_A 87 PLFATSGED----------------------------------------------------------------------- 95 (313)
T ss_dssp ETTCCTTSC-----------------------------------------------------------------------
T ss_pred EeeecCCCC-----------------------------------------------------------------------
Confidence 997654110
Q ss_pred eecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeee--CCceEEEEEec-CCcEEE
Q psy18231 356 TQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYV--GEPIVDACFTR-DCQCIL 432 (540)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~i~~~~~sp-~~~~l~ 432 (540)
....+..|...|.+++|+++.+++++.||.|++|| .++....+. ...+.+++|+| ++++++
T Consensus 96 --------------~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 96 --------------PLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp --------------C-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred --------------cccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 12245678899999999889999999999999999 555555554 46899999998 999999
Q ss_pred eecCCCeEEEEeccccchhhhhcc-CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEE
Q psy18231 433 TCSTDECLRLFDKATGELLEEYKG-HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511 (540)
Q Consensus 433 ~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 511 (540)
+++.|+.|++|| ..+.+..+.. |...+..+ +|+|++. +++++.||.|++||+.+++.+..+. .|...|++++
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~--~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~ 232 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGIHNDVVRHL--AVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE--GHESFVYCIK 232 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSSCSSCEEEE--EEEETTE-EEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEE
T ss_pred EEECCCCEEEEe--cCceEEEEeccCcccEEEE--EEcCCCe-EEEccCCCeEEEEECCchhhhhhhh--cCCceEEEEE
Confidence 999999999999 4455566666 77788777 8899988 9999999999999999999999998 8999999999
Q ss_pred EcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 512 SHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 512 ~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
|+|++ .|++++ |+.|++||+.++
T Consensus 233 ~~~~~-~l~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 233 LLPNG-DIVSCGEDRTVRIWSKENG 256 (313)
T ss_dssp ECTTS-CEEEEETTSEEEEECTTTC
T ss_pred EecCC-CEEEEecCCEEEEEECCCC
Confidence 99999 577777 999999999765
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.2e-35 Score=285.83 Aligned_cols=270 Identities=11% Similarity=0.135 Sum_probs=223.1
Q ss_pred ccchhhhhhcccccceeeeecccccc-------eeeeeecCeEEEEeCC-CCCEEEEeeCCCcEEEEcCCCC-------e
Q psy18231 133 PRTITRILYELPKEWSIRVYRPLTVN-------RELFVLSGLMHTRFPV-DGSYCLTCGSDKKIKLWNPYRN-------L 197 (540)
Q Consensus 133 ~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~h~~~v~~v~~sp-dg~~lat~~~dg~i~iwd~~~~-------~ 197 (540)
++....+++..+.++.|++|+..... ...+|.+.|++++|+| ++++|++|+.||+|++||+.++ +
T Consensus 43 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~ 122 (402)
T 2aq5_A 43 NPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLRE 122 (402)
T ss_dssp CSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCS
T ss_pred CCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCC
Confidence 44445666677889999999975432 2456999999999999 9999999999999999999987 6
Q ss_pred eEEEeecCCcceeEEEEeeCC-CeEEEeeCCCeEEEEEcCCCceeEec--cccCCceeEEEECCCCCEEEEecCCCcEEE
Q psy18231 198 LLKTYGGHAHEVNDATAACDS-SQIASGASDKSVILWEVTTGQPVRRW--REHASKVTCVKFNEDSSVVISGSQDNTVMM 274 (540)
Q Consensus 198 ~~~~~~~h~~~v~~l~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 274 (540)
.+..+.+|...|.+++|+|++ ++|++++.|++|++||+++++.+..+ ..|...|.+++|+|++++|++++.||.|++
T Consensus 123 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 202 (402)
T 2aq5_A 123 PVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRV 202 (402)
T ss_dssp CSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred ceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEE
Confidence 788899999999999999998 69999999999999999999999988 889999999999999999999999999999
Q ss_pred EEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeeccc
Q psy18231 275 WDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLG 354 (540)
Q Consensus 275 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (540)
||+++++.
T Consensus 203 wd~~~~~~------------------------------------------------------------------------ 210 (402)
T 2aq5_A 203 IEPRKGTV------------------------------------------------------------------------ 210 (402)
T ss_dssp EETTTTEE------------------------------------------------------------------------
T ss_pred EeCCCCce------------------------------------------------------------------------
Confidence 99987641
Q ss_pred ceecccccccccccchhhhh-hccccc-EEEEEecC--CeeEee---eCCCeEEEEeCCCCce-E--Eeee-CCceEEEE
Q psy18231 355 STQIGDVTPISIHNSCFQAL-KEARDS-ITSVHVSD--HEILTA---SLDCRIRRYDIRTGNL-V--TDYV-GEPIVDAC 423 (540)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~l~~~~--~~l~~~---~~dg~i~iwd~~~~~~-~--~~~~-~~~i~~~~ 423 (540)
+..+ ..|.+. +.++.|+| .+++++ +.|+.|++||+++++. + ..+. ...+.+++
T Consensus 211 ----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 211 ----------------VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp ----------------EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred ----------------eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 0022 344444 78889988 567777 6899999999998764 2 2222 35799999
Q ss_pred EecCCcEEE-eecCCCeEEEEeccccch-hhhhccC--cCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc
Q psy18231 424 FTRDCQCIL-TCSTDECLRLFDKATGEL-LEEYKGH--KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 424 ~sp~~~~l~-~~~~dg~i~i~d~~~~~~-~~~~~~~--~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~ 494 (540)
|+|++++|+ +++.||.|++||+.+++. +..+..| ...+..+ +|+|++.++++ .++.+++|++.+++.
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~--~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGM--GYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEE--EECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccce--EEeccccccee--cceeEEEEEcCCCcE
Confidence 999999986 456799999999998874 5555444 4778877 89999988775 466999999988754
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-35 Score=284.22 Aligned_cols=292 Identities=10% Similarity=0.060 Sum_probs=226.8
Q ss_pred CCcceeccccchhhhhhcccccceeeeecccccceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeec
Q psy18231 125 THPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGG 204 (540)
Q Consensus 125 ~~~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~ 204 (540)
...+.++++ ..++++.+.|.+|+ +........+|...|.+++|+|+| .++.+.+|+.+.. .+..+ .
T Consensus 18 v~sv~~SpD---G~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~~~~-~ 83 (588)
T 2j04_A 18 KNNLTWARD---GTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GLLNS-Q 83 (588)
T ss_dssp SCCEEECTT---SCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CSSTT-S
T ss_pred EEEEEECCC---CCEEEEEcCCceee--cccccceecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eEeec-C
Confidence 456677777 46777889999999 555555556899999999999999 4666666664322 22233 4
Q ss_pred CCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCC-----ceeEEEECCCCCEEEEecCCCcEEEEEecC
Q psy18231 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHAS-----KVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279 (540)
Q Consensus 205 h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 279 (540)
|...|.+++|||+|++||+++.||+|++||.+. ++..+. |.. .|.+++|+|||++|++|+.||+|++||+.+
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 688999999999999999999999999999644 666666 665 499999999999999999999999999987
Q ss_pred CCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecc
Q psy18231 280 RSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359 (540)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (540)
+.......
T Consensus 161 ~~l~~~~~------------------------------------------------------------------------ 168 (588)
T 2j04_A 161 NSENTPEF------------------------------------------------------------------------ 168 (588)
T ss_dssp CTTTCCCC------------------------------------------------------------------------
T ss_pred Cccccccc------------------------------------------------------------------------
Confidence 64100000
Q ss_pred cccccccccchhhh----hhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCce---EEeee---CCceEEEEEecCCc
Q psy18231 360 DVTPISIHNSCFQA----LKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNL---VTDYV---GEPIVDACFTRDCQ 429 (540)
Q Consensus 360 ~~~~~~~~~~~~~~----~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~---~~~i~~~~~sp~~~ 429 (540)
-.+.. ..+|...|.+++|+|+-+++++.|+++++||+.+++. ..++. ...|.+++|+ |+
T Consensus 169 ---------i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~ 237 (588)
T 2j04_A 169 ---------YFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DY 237 (588)
T ss_dssp ---------EEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TT
T ss_pred ---------eeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CC
Confidence 00002 2568889999999994499999999999999998774 23442 3579999999 68
Q ss_pred EEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEe--cCCCCeEEEeeCCCcEEEEEecC----------------
Q psy18231 430 CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCL--DSKDSQIFCGSSDGKIYKWQLVD---------------- 491 (540)
Q Consensus 430 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--s~~~~~l~s~s~dg~i~iwd~~~---------------- 491 (540)
.||+++ +++|++||+.+++......+|...++.+ +| +|++..|+++++||+ ++|....
T Consensus 238 ~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~v--a~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~ 313 (588)
T 2j04_A 238 KVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHII--PLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKK 313 (588)
T ss_dssp EEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEE--EETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHH
T ss_pred EEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEE--EeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCE
Confidence 888887 6999999999887743343799999998 88 999999999999999 9998631
Q ss_pred -------CcceeEEEecccceeeeEEEEcCCCcEEEeec
Q psy18231 492 -------SSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 492 -------~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~ 523 (540)
+..+..+ .+...|.+++|||||+.+|+++
T Consensus 314 v~lW~~~g~~l~~~---~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 314 FKKWSTIWNEFNNY---ETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp HHHTTTTTTSSSSS---CCEEEEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCceeee---ccceEEEEEEECCCCCEEEEEE
Confidence 1112222 2356799999999999999987
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.3e-34 Score=281.95 Aligned_cols=251 Identities=18% Similarity=0.249 Sum_probs=211.1
Q ss_pred EEeecCCcceeEEEEeeC-CCeEEEeeCCCeEEEEEcCC----------CceeEeccccCCceeEEEECCCCC-EEEEec
Q psy18231 200 KTYGGHAHEVNDATAACD-SSQIASGASDKSVILWEVTT----------GQPVRRWREHASKVTCVKFNEDSS-VVISGS 267 (540)
Q Consensus 200 ~~~~~h~~~v~~l~~sp~-~~~l~s~s~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~ 267 (540)
.....|.+.|++++|+|+ +.+|++++.||.|++||+.+ .+.+..+.+|...|.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445679999999999997 78999999999999999987 577788889999999999999988 999999
Q ss_pred CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeE
Q psy18231 268 QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLM 347 (540)
Q Consensus 268 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (540)
.||.|++||+.........
T Consensus 202 ~dg~i~vwd~~~~~~~~~~------------------------------------------------------------- 220 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRV------------------------------------------------------------- 220 (430)
T ss_dssp TTSCEEEEETTSCCBGGGE-------------------------------------------------------------
T ss_pred CCCeEEEEeCCCCCCCCce-------------------------------------------------------------
Confidence 9999999999875410000
Q ss_pred EEeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeEeeeCCCeEEEEeCCCC---ceEEeee--CCce
Q psy18231 348 VLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILTASLDCRIRRYDIRTG---NLVTDYV--GEPI 419 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~---~~~~~~~--~~~i 419 (540)
......+..|...|.+++|+| ..+++++.||.|++||++++ +.+..+. ...|
T Consensus 221 --------------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 221 --------------------IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp --------------------EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred --------------------eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 000114457889999999987 68889999999999999987 4555554 3689
Q ss_pred EEEEEecCCc-EEEeecCCCeEEEEeccc-cchhhhhccCcCCcceEEEEecCCCC-eEEEeeCCCcEEEEEecCC----
Q psy18231 420 VDACFTRDCQ-CILTCSTDECLRLFDKAT-GELLEEYKGHKSGDFRIECCLDSKDS-QIFCGSSDGKIYKWQLVDS---- 492 (540)
Q Consensus 420 ~~~~~sp~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~s~s~dg~i~iwd~~~~---- 492 (540)
++++|+|+++ ++++|+.||.|++||+++ .+.+..+..|...+..+ +|+|+++ +|++++.||.|++||+...
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i--~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV--QWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE--EECSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE--EECCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 9999999987 688999999999999998 56788889999998888 8999996 5999999999999999872
Q ss_pred ----------cceeEEEecccceeeeEEEEcCCCc-EEEeec-CCeeEEEEcccc
Q psy18231 493 ----------SQISTLIHSVGKAVVNSLCSHPTRK-HIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 493 ----------~~~~~~~~~~~~~~v~~l~~s~d~~-~l~s~~-d~~i~iw~~~~~ 535 (540)
+.+..+. +|...|++++|+|+++ +|++++ ||.|++|++.+.
T Consensus 359 ~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 359 STEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CHHHHHHCCTTEEEECC--CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CccccccCCcceEEEcC--CCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 3444444 8899999999999999 888888 999999999764
No 108
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.3e-35 Score=280.79 Aligned_cols=255 Identities=10% Similarity=0.021 Sum_probs=197.9
Q ss_pred cceeeeecccccce-------------eeeeecCeEEEEeCCCCCEEEEe-----------eCCCcEEEEcCCCCeeE--
Q psy18231 146 EWSIRVYRPLTVNR-------------ELFVLSGLMHTRFPVDGSYCLTC-----------GSDKKIKLWNPYRNLLL-- 199 (540)
Q Consensus 146 ~~~i~~~~~~~~~~-------------~~~h~~~v~~v~~spdg~~lat~-----------~~dg~i~iwd~~~~~~~-- 199 (540)
+..|++|+...... ...|.+.|.+++++ ++.+++| +.|+++++|++.+....
T Consensus 42 ~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~ 119 (365)
T 4h5i_A 42 PNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLE 119 (365)
T ss_dssp CEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEE
T ss_pred CCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEE
Confidence 44689998654321 12356678887664 4566654 45788999987654322
Q ss_pred --EEe-----ecCCcceeEEEEeeCCCeEEEe--eCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCC
Q psy18231 200 --KTY-----GGHAHEVNDATAACDSSQIASG--ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 270 (540)
Q Consensus 200 --~~~-----~~h~~~v~~l~~sp~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 270 (540)
... ..+...+.+++|||||++|+++ +.|++|+|||+++++++..+. |.+.|.+++|+|||+++++++. +
T Consensus 120 ~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~-~ 197 (365)
T 4h5i_A 120 FLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG-S 197 (365)
T ss_dssp EEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS-S
T ss_pred EeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc-e
Confidence 111 2244568899999999998654 478999999999999988875 7889999999999999999985 4
Q ss_pred cEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEe
Q psy18231 271 TVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLL 350 (540)
Q Consensus 271 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (540)
.+.+|+..+++....
T Consensus 198 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 212 (365)
T 4h5i_A 198 SLEVISTVTGSCIAR----------------------------------------------------------------- 212 (365)
T ss_dssp CEEEEETTTCCEEEE-----------------------------------------------------------------
T ss_pred eEEEEEeccCcceee-----------------------------------------------------------------
Confidence 577777766542100
Q ss_pred ecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCC----eEEEEeCCCCceE----EeeeC--Cc
Q psy18231 351 DFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDC----RIRRYDIRTGNLV----TDYVG--EP 418 (540)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg----~i~iwd~~~~~~~----~~~~~--~~ 418 (540)
.....|...|.+++|+| ..+++++.|+ .+++||+...... ..+.+ ..
T Consensus 213 ---------------------~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 271 (365)
T 4h5i_A 213 ---------------------KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG 271 (365)
T ss_dssp ---------------------ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC
T ss_pred ---------------------eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC
Confidence 13346788899999998 7788888877 6889998776542 23333 57
Q ss_pred eEEEEEecCCcEEEeecCCCeEEEEeccccchhhh-hccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCC
Q psy18231 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEE-YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS 492 (540)
Q Consensus 419 i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~ 492 (540)
|++++|+|+|++||+|+.|++|+|||+++++++.+ +++|...|+++ +|+|||++||+||.|++|+|||+...
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v--~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEV--TISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEE--EECTTSCEEEEEETTSEEEEEECCTT
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEE--EECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999999999999999999887 47899999988 89999999999999999999999643
No 109
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2e-34 Score=278.64 Aligned_cols=280 Identities=16% Similarity=0.116 Sum_probs=177.0
Q ss_pred eecccccceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEE-----EeecCCcceeEEEEee--------C
Q psy18231 151 VYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLK-----TYGGHAHEVNDATAAC--------D 217 (540)
Q Consensus 151 ~~~~~~~~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~-----~~~~h~~~v~~l~~sp--------~ 217 (540)
.|..........|...+....+++++++||+++.|++|+|||..+++... .+.+|.+.|++++|+| |
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d 155 (393)
T 4gq1_A 76 SFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLA 155 (393)
T ss_dssp EECTTCEEECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEE
T ss_pred eecCCccccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCC
Confidence 34444433444566777777888899999999999999999998886543 3578999999999998 8
Q ss_pred CCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCC-CEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhh
Q psy18231 218 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS-SVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKE 296 (540)
Q Consensus 218 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 296 (540)
+++||+++.|++|+|||+.++.++..+..|.+.|.+++|+|++ .+|++++.||+|++||+++++......... ..
T Consensus 156 ~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~----~~ 231 (393)
T 4gq1_A 156 EQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTE----LV 231 (393)
T ss_dssp EEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC--------------C
T ss_pred CCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccC----Cc
Confidence 8999999999999999999998888888999999999999987 589999999999999998876311110000 00
Q ss_pred cCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhc
Q psy18231 297 ARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKE 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (540)
.... ...... ..........+
T Consensus 232 ~~~~----------------------------------------------~~s~~~-------------~~~~~~~~~~~ 252 (393)
T 4gq1_A 232 KNPW----------------------------------------------LLTLNT-------------LPLVNTCHSSG 252 (393)
T ss_dssp SCCC----------------------------------------------SEEEES-------------GGGC------C
T ss_pred ccce----------------------------------------------EEeccc-------------ccceeeeeccc
Confidence 0000 000000 00000001123
Q ss_pred ccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEe-cCCcEEEeecCCCeEEEEeccccchhhhhc
Q psy18231 377 ARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFT-RDCQCILTCSTDECLRLFDKATGELLEEYK 455 (540)
Q Consensus 377 ~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~s-p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 455 (540)
|... +.++.|+ |+++.+++++.|+++++||+..++....+.
T Consensus 253 ~~~~--------------------------------------v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~ 294 (393)
T 4gq1_A 253 IASS--------------------------------------LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEIS 294 (393)
T ss_dssp CSSS--------------------------------------CSEEEEETTTTCEEEEECTTSEEEEEEC----------
T ss_pred cccc--------------------------------------ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEe
Confidence 3333 4444444 455555555555555555555544443333
Q ss_pred cCcCCcceE----------------EEEecC--CCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCc
Q psy18231 456 GHKSGDFRI----------------ECCLDS--KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 517 (540)
Q Consensus 456 ~~~~~v~~~----------------~~~~s~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 517 (540)
.|...+..+ ...+++ ++.++++|+.||+|++||+.+++....+. .|..+|.+++|+|||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~--~~~~~V~svafspdG~ 372 (393)
T 4gq1_A 295 DSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI--QLGMPIVDFCWHQDGS 372 (393)
T ss_dssp ---------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE--ECSSCEEEEEECTTSS
T ss_pred eecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec--CCCCcEEEEEEcCCCC
Confidence 332222111 112333 44567889999999999999999988887 7889999999999999
Q ss_pred EEEeecCCeeEEEEcc
Q psy18231 518 HIMSACGNNVKLWTAE 533 (540)
Q Consensus 518 ~l~s~~d~~i~iw~~~ 533 (540)
+||+++++.+.+|++.
T Consensus 373 ~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 373 HLAIATEGSVLLTRLM 388 (393)
T ss_dssp EEEEEESSEEEEEEEG
T ss_pred EEEEEeCCCeEEEEEe
Confidence 9999997778888764
No 110
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.9e-33 Score=273.41 Aligned_cols=277 Identities=10% Similarity=0.067 Sum_probs=231.1
Q ss_pred eecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEE-----EeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC
Q psy18231 163 VLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLK-----TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237 (540)
Q Consensus 163 h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~-----~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 237 (540)
+...+.+++|+|+++++++++.++.|++||+.+++.+. .+.+|...|.+++|+|+++++++++.|+.|++||+++
T Consensus 121 ~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 121 TGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp CSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 44567799999988888888889999999999998887 3457899999999999999999999999999999999
Q ss_pred CceeEeccccCCceeEEEECCCCCEEE-EecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccc
Q psy18231 238 GQPVRRWREHASKVTCVKFNEDSSVVI-SGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLS 316 (540)
Q Consensus 238 ~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (540)
++.+..+..|...+.+++|+|++++++ +++.|+.|++||+++++. ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~--~~------------------------------ 248 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE--IR------------------------------ 248 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE--EE------------------------------
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE--EE------------------------------
Confidence 999999989999999999999998875 555799999999987641 00
Q ss_pred cCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEee
Q psy18231 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTA 394 (540)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~ 394 (540)
.+. +...+.+++++| +.++++
T Consensus 249 --------------------------------------------------------~~~-~~~~~~~~~~~~~g~~l~~~ 271 (433)
T 3bws_A 249 --------------------------------------------------------KTD-KIGLPRGLLLSKDGKELYIA 271 (433)
T ss_dssp --------------------------------------------------------ECC-CCSEEEEEEECTTSSEEEEE
T ss_pred --------------------------------------------------------Eec-CCCCceEEEEcCCCCEEEEE
Confidence 111 123478899988 577777
Q ss_pred e--------CCCeEEEEeCCCCceEEeee-CCceEEEEEecCCcE-EEeecCCCeEEEEeccccchhhhhccCcCCcceE
Q psy18231 395 S--------LDCRIRRYDIRTGNLVTDYV-GEPIVDACFTRDCQC-ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 464 (540)
Q Consensus 395 ~--------~dg~i~iwd~~~~~~~~~~~-~~~i~~~~~sp~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~ 464 (540)
+ .|+.|++||+++++.+..+. ...+.+++|+|+++. +++++.|+.|++||+.+++.+..+. +...+..+
T Consensus 272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~ 350 (433)
T 3bws_A 272 QFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTI 350 (433)
T ss_dssp EEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEE
T ss_pred ECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeE
Confidence 7 58899999999998776664 357889999999975 5666899999999999988877775 45556655
Q ss_pred EEEecCCCCeEEEeeC---------------CCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec--CCee
Q psy18231 465 ECCLDSKDSQIFCGSS---------------DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC--GNNV 527 (540)
Q Consensus 465 ~~~~s~~~~~l~s~s~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~--d~~i 527 (540)
+|+|+|++|++++. ||.|++||+.+++.+..+. . ...+.+++|+|+|++|++++ |+.|
T Consensus 351 --~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~--~-~~~~~~~~~s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 351 --ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE--A-GNQPTGLDVSPDNRYLVISDFLDHQI 425 (433)
T ss_dssp --EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE--C-SSSEEEEEECTTSCEEEEEETTTTEE
T ss_pred --EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec--C-CCCCceEEEcCCCCEEEEEECCCCeE
Confidence 89999999888876 5799999999999888887 3 45789999999999988764 9999
Q ss_pred EEEEccc
Q psy18231 528 KLWTAEE 534 (540)
Q Consensus 528 ~iw~~~~ 534 (540)
++|++++
T Consensus 426 ~v~~~~~ 432 (433)
T 3bws_A 426 RVYRRDG 432 (433)
T ss_dssp EEEEETT
T ss_pred EEEEecC
Confidence 9999863
No 111
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.7e-34 Score=280.39 Aligned_cols=276 Identities=14% Similarity=0.220 Sum_probs=202.7
Q ss_pred CCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc-----------eeEeccccC------------CceeEEEECCCC-
Q psy18231 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ-----------PVRRWREHA------------SKVTCVKFNEDS- 260 (540)
Q Consensus 205 h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~-----------~~~~~~~h~------------~~v~~~~~~~~~- 260 (540)
|.+.|++++|+|++++||+|+.||.|+|||+.+++ ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999999877 477788998 889999999998
Q ss_pred -CEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeee
Q psy18231 261 -SVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGV 339 (540)
Q Consensus 261 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (540)
.+|++++.||+|++||+.+........... .... .... ...........
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~-----~~~g---~~~~----------------------~~~~~~~~~~~ 156 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLK-----EEDG---RYRD----------------------PTTVTTLRVPV 156 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------------------------------------CCCCCSCCCCE
T ss_pred cceEEEeCCCCeEEEEecccccCCcceeccc-----Cccc---cccC----------------------cccccceEecc
Confidence 799999999999999998754210000000 0000 0000 00000000000
Q ss_pred eeccceeEEEeecccceecccccccccccchhh-hhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCC-CceEEee-
Q psy18231 340 LMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQ-ALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRT-GNLVTDY- 414 (540)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~-~~~~~~~- 414 (540)
..... ... ...... ...+|...|.+++|+| ++++++ .|+.|++||+++ ++.+..+
T Consensus 157 -~~~~~-~~~-----------------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~ 216 (447)
T 3dw8_B 157 -FRPMD-LMV-----------------EASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVD 216 (447)
T ss_dssp -EEEEE-EEE-----------------EEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEE
T ss_pred -ccchh-eee-----------------eccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeee
Confidence 00000 000 000011 2357899999999998 778887 899999999994 4444422
Q ss_pred ------e--CCceEEEEEecCC-cEEEeecCCCeEEEEeccccch----hhhhccCcC------------CcceEEEEec
Q psy18231 415 ------V--GEPIVDACFTRDC-QCILTCSTDECLRLFDKATGEL----LEEYKGHKS------------GDFRIECCLD 469 (540)
Q Consensus 415 ------~--~~~i~~~~~sp~~-~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~------------~v~~~~~~~s 469 (540)
. ...|.+++|+|++ ++|++++.||.|++||+++++. +..+..|.. .+..+ +|+
T Consensus 217 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s 294 (447)
T 3dw8_B 217 IKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDV--KFS 294 (447)
T ss_dssp CCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEE--EEC
T ss_pred cccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEE--EEC
Confidence 2 3579999999998 9999999999999999999886 677777775 77777 899
Q ss_pred CCCCeEEEeeCCCcEEEEEecC-CcceeEEEeccccee---------------eeEEEEcCCCcEEEeec-CCeeEEEEc
Q psy18231 470 SKDSQIFCGSSDGKIYKWQLVD-SSQISTLIHSVGKAV---------------VNSLCSHPTRKHIMSAC-GNNVKLWTA 532 (540)
Q Consensus 470 ~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~---------------v~~l~~s~d~~~l~s~~-d~~i~iw~~ 532 (540)
|++++|++++. +.|++||+.+ ++++..+. .|... +..++|+|++++|++++ ||.|++||+
T Consensus 295 ~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 295 HSGRYMMTRDY-LSVKVWDLNMENRPVETYQ--VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp TTSSEEEEEES-SEEEEEETTCCSSCSCCEE--SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred CCCCEEEEeeC-CeEEEEeCCCCccccceee--ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 99999999999 9999999997 88888888 67542 33499999999999999 999999999
Q ss_pred ccc
Q psy18231 533 EED 535 (540)
Q Consensus 533 ~~~ 535 (540)
.++
T Consensus 372 ~~~ 374 (447)
T 3dw8_B 372 NTK 374 (447)
T ss_dssp TTC
T ss_pred CCC
Confidence 765
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=268.02 Aligned_cols=265 Identities=11% Similarity=0.094 Sum_probs=210.9
Q ss_pred EEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcC---------CCce
Q psy18231 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT---------TGQP 240 (540)
Q Consensus 170 v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~---------~~~~ 240 (540)
..+.+++++|++|+.||+|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 3456788999999999999999999999888887 577888999988 9999999999999765 4554
Q ss_pred eEecc-ccCCceeEEEECC--CCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccccc
Q psy18231 241 VRRWR-EHASKVTCVKFNE--DSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317 (540)
Q Consensus 241 ~~~~~-~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (540)
+..+. +|.+.|.+++|+| +++++++++.||+|++||+++++. ..
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--~~------------------------------- 163 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--YI------------------------------- 163 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--EE-------------------------------
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--EE-------------------------------
Confidence 44443 6778999999999 999999999999999999987762 00
Q ss_pred CceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeee
Q psy18231 318 GLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTAS 395 (540)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~ 395 (540)
.....+...+.+++|+| .++++|+
T Consensus 164 ------------------------------------------------------~~~~~~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 164 ------------------------------------------------------VHSAKSDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp ------------------------------------------------------EECCCSSCCCCEEEECTTSCEEEEEC
T ss_pred ------------------------------------------------------EEecCCCCceEEEEECCCCCEEEEEc
Confidence 00123455689999998 7899999
Q ss_pred CCCeEEEEeCCCCceE-EeeeC---CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhcc---CcCCcceEEEEe
Q psy18231 396 LDCRIRRYDIRTGNLV-TDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG---HKSGDFRIECCL 468 (540)
Q Consensus 396 ~dg~i~iwd~~~~~~~-~~~~~---~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~ 468 (540)
.||.|++||+++++.+ ..+.. .+|.+++|+|++.+|++++ |+.|++||+++++.+..+.. |...+....++|
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI 268 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE
T ss_pred CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEE
Confidence 9999999999999876 55554 5899999999999999999 55999999999887766654 434444323589
Q ss_pred cCCCCeEEEeeC-CCcEEEEEecCCcceeEEEecccceeeeEEEEcC---CCcEEEeec-CCeeEEEEcc
Q psy18231 469 DSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP---TRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 469 s~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~---d~~~l~s~~-d~~i~iw~~~ 533 (540)
+|+|++|++++. |+.|++|++......... .++..++|++ +.+.|++++ |+.+.++-..
T Consensus 269 ~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 269 DDSGKNMIAYSNESNSLTIYKFDKKTKNWTK------DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCSEEE------EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred CCCCCEEEEecCCCCcEEEEEEcccccceEe------cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 999999999998 999999999766544332 5678888988 888999988 9998887543
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.4e-33 Score=265.46 Aligned_cols=256 Identities=11% Similarity=0.090 Sum_probs=220.3
Q ss_pred hhhhcccccceeeeecccccc------eeeeeecCeEEEEeCCCCC-EEEEeeCCCcEEEEcC-CCCeeEEEeec--CCc
Q psy18231 138 RILYELPKEWSIRVYRPLTVN------RELFVLSGLMHTRFPVDGS-YCLTCGSDKKIKLWNP-YRNLLLKTYGG--HAH 207 (540)
Q Consensus 138 ~~~~~~~~~~~i~~~~~~~~~------~~~~h~~~v~~v~~spdg~-~lat~~~dg~i~iwd~-~~~~~~~~~~~--h~~ 207 (540)
..++.++.++.|++|+..... ....|...|.+++|+|+++ +|++|+.||.|++||+ .+++. ..+.+ |..
T Consensus 24 ~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~ 102 (342)
T 1yfq_A 24 SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANL 102 (342)
T ss_dssp TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCS
T ss_pred CEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCC
Confidence 455667888999999986643 3456899999999999999 9999999999999999 77754 77888 999
Q ss_pred ceeEEEEeeCCCeEEEeeCCCeEEEEEcCC---------CceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEec
Q psy18231 208 EVNDATAACDSSQIASGASDKSVILWEVTT---------GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278 (540)
Q Consensus 208 ~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 278 (540)
.|.+++|+| +++|++++.|+.|++||+++ ++++..+. |...|.+++|+|++ +++++.||.|++||++
T Consensus 103 ~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~ 178 (342)
T 1yfq_A 103 GICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLP 178 (342)
T ss_dssp CEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESS
T ss_pred ceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECC
Confidence 999999999 99999999999999999988 77777776 89999999999886 9999999999999998
Q ss_pred C-CCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeeccccee
Q psy18231 279 S-RSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQ 357 (540)
Q Consensus 279 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (540)
+ .......
T Consensus 179 ~~~~~~~~~----------------------------------------------------------------------- 187 (342)
T 1yfq_A 179 LCEDDNGTI----------------------------------------------------------------------- 187 (342)
T ss_dssp CCTTCCCEE-----------------------------------------------------------------------
T ss_pred cccccccee-----------------------------------------------------------------------
Confidence 7 4411100
Q ss_pred cccccccccccchhhhhhcccccEEEEEecC---CeeEeeeCCCeEEEEeCCCC------ceEEeeeCC-----------
Q psy18231 358 IGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILTASLDCRIRRYDIRTG------NLVTDYVGE----------- 417 (540)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~----------- 417 (540)
....|...+.+++|+| +.+++++.||.|++|+++.. +....+..+
T Consensus 188 ---------------~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (342)
T 1yfq_A 188 ---------------EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252 (342)
T ss_dssp ---------------EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCC
T ss_pred ---------------eecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccce
Confidence 2235667899999986 78999999999999999887 666666653
Q ss_pred ceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccC-cCCcceEEEEecCCCCeEEEeeCCCc-EEEEE
Q psy18231 418 PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH-KSGDFRIECCLDSKDSQIFCGSSDGK-IYKWQ 488 (540)
Q Consensus 418 ~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~s~~~~~l~s~s~dg~-i~iwd 488 (540)
.|.+++|+|++++|++++.||.|++||+.+++.+..+.+| ...|..+ + |++++|++++.||. .+.|.
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~--~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI--A--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEE--E--ECSSEEEEEEECTHHHHCSS
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEe--c--CCCCeEEEEecCCccccccc
Confidence 8999999999999999999999999999999999999998 8888877 4 99999999999998 55554
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.6e-33 Score=272.68 Aligned_cols=247 Identities=15% Similarity=0.236 Sum_probs=210.7
Q ss_pred eeeeeecCeEEEEeCCC-CCEEEEeeCCCcEEEEcCCC----------CeeEEEeecCCcceeEEEEeeCCC-eEEEeeC
Q psy18231 159 RELFVLSGLMHTRFPVD-GSYCLTCGSDKKIKLWNPYR----------NLLLKTYGGHAHEVNDATAACDSS-QIASGAS 226 (540)
Q Consensus 159 ~~~~h~~~v~~v~~spd-g~~lat~~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~ 226 (540)
....|.+.|++++|+|+ +++||+++.||.|++||+.+ ...+..+.+|...|++++|+|++. +|++++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 45679999999999997 78999999999999999876 677888999999999999999988 9999999
Q ss_pred CCeEEEEEcCCCce-------eEeccccCCceeEEEECC-CCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcC
Q psy18231 227 DKSVILWEVTTGQP-------VRRWREHASKVTCVKFNE-DSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEAR 298 (540)
Q Consensus 227 dg~i~iwd~~~~~~-------~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 298 (540)
||.|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.||.|++||+++.....
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~-------------- 268 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK-------------- 268 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS--------------
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc--------------
Confidence 99999999987432 455678999999999999 77899999999999999998764100
Q ss_pred CceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhccc
Q psy18231 299 DSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEAR 378 (540)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (540)
....+..|.
T Consensus 269 -----------------------------------------------------------------------~~~~~~~~~ 277 (430)
T 2xyi_A 269 -----------------------------------------------------------------------PSHTVDAHT 277 (430)
T ss_dssp -----------------------------------------------------------------------CSEEEECCS
T ss_pred -----------------------------------------------------------------------ceeEeecCC
Confidence 111345788
Q ss_pred ccEEEEEecC---CeeEeeeCCCeEEEEeCCC-CceEEeee--CCceEEEEEecCCc-EEEeecCCCeEEEEeccc----
Q psy18231 379 DSITSVHVSD---HEILTASLDCRIRRYDIRT-GNLVTDYV--GEPIVDACFTRDCQ-CILTCSTDECLRLFDKAT---- 447 (540)
Q Consensus 379 ~~v~~l~~~~---~~l~~~~~dg~i~iwd~~~-~~~~~~~~--~~~i~~~~~sp~~~-~l~~~~~dg~i~i~d~~~---- 447 (540)
..|.+++|+| .++++++.||.|++||+++ .+.+..+. ...|.+++|+|+++ +|++++.|+.|++||+..
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 8999999998 3688999999999999998 45566665 36899999999985 699999999999999987
Q ss_pred ----------cchhhhhccCcCCcceEEEEecCCCC-eEEEeeCCCcEEEEEecCC
Q psy18231 448 ----------GELLEEYKGHKSGDFRIECCLDSKDS-QIFCGSSDGKIYKWQLVDS 492 (540)
Q Consensus 448 ----------~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~s~s~dg~i~iwd~~~~ 492 (540)
.+.+..+.+|...+..+ +|+|+++ +|++++.||.|++|++...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEE--EECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEEcCCCCCCceEE--EECCCCCCEEEEEECCCCEEEeEcccc
Confidence 24556677888888877 8999999 8999999999999998654
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-34 Score=296.99 Aligned_cols=249 Identities=16% Similarity=0.208 Sum_probs=208.2
Q ss_pred EEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcC--CCceeEeccccCCceeEEEECCC--CCEEEEecCCCcEEE
Q psy18231 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT--TGQPVRRWREHASKVTCVKFNED--SSVVISGSQDNTVMM 274 (540)
Q Consensus 199 ~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~i 274 (540)
+..+.+|.+.|++++|+|++++|++|+.||+|+|||+. +++.+..+.+|.+.|.+++|+|+ +++|++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 34678999999999999999999999999999999998 55777888999999999999987 999999999999999
Q ss_pred EEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeeccc
Q psy18231 275 WDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLG 354 (540)
Q Consensus 275 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (540)
||+.+++...
T Consensus 82 wd~~~~~~~~---------------------------------------------------------------------- 91 (753)
T 3jro_A 82 WKEENGRWSQ---------------------------------------------------------------------- 91 (753)
T ss_dssp EEEETTEEEE----------------------------------------------------------------------
T ss_pred EECCCCcccc----------------------------------------------------------------------
Confidence 9998764111
Q ss_pred ceecccccccccccchhhhhhcccccEEEEEecC----CeeEeeeCCCeEEEEeCCCCce--EEeee--CCceEEEEEec
Q psy18231 355 STQIGDVTPISIHNSCFQALKEARDSITSVHVSD----HEILTASLDCRIRRYDIRTGNL--VTDYV--GEPIVDACFTR 426 (540)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~l~~~~~dg~i~iwd~~~~~~--~~~~~--~~~i~~~~~sp 426 (540)
...+..|...|.+++|+| +.+++++.||.|++||++++.. ...+. ...|.+++|+|
T Consensus 92 ----------------~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p 155 (753)
T 3jro_A 92 ----------------IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (753)
T ss_dssp ----------------EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECC
T ss_pred ----------------cccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecC
Confidence 114557889999999997 4899999999999999998733 22333 36899999999
Q ss_pred -------------CCcEEEeecCCCeEEEEecccc----chhhhhccCcCCcceEEEEecCC---CCeEEEeeCCCcEEE
Q psy18231 427 -------------DCQCILTCSTDECLRLFDKATG----ELLEEYKGHKSGDFRIECCLDSK---DSQIFCGSSDGKIYK 486 (540)
Q Consensus 427 -------------~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~s~~---~~~l~s~s~dg~i~i 486 (540)
+++++++|+.||.|++||++++ .....+.+|...|.++ +|+|+ +++|++|+.||.|++
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l--~~sp~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV--AWSPTVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE--EECCCCSSSEEEEEEESSSCEEE
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEE--EeccCCCCCCEEEEEecCCEEEE
Confidence 5899999999999999999877 4567788899999888 89999 899999999999999
Q ss_pred EEecCCcce---eEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 487 WQLVDSSQI---STLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 487 wd~~~~~~~---~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
||+.+++.. .......|...|++++|+|++++|++++ ||.|++|++..+
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 234 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred ecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 999887421 1111225889999999999999999999 999999999853
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3.3e-32 Score=246.43 Aligned_cols=269 Identities=13% Similarity=0.090 Sum_probs=185.6
Q ss_pred eEEEEeCCCCC---EEEEeeCCCcEEEEcCCCC---eeEEEeecCCcceeEEEEeeCCCeEEEeeC-C---CeEEEEEcC
Q psy18231 167 LMHTRFPVDGS---YCLTCGSDKKIKLWNPYRN---LLLKTYGGHAHEVNDATAACDSSQIASGAS-D---KSVILWEVT 236 (540)
Q Consensus 167 v~~v~~spdg~---~lat~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~-d---g~i~iwd~~ 236 (540)
+.++.|-.-|- -+++++ ...|++|+..++ +.+++++.|+.+|..+.+.||..-|++..- + +.|+..-+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 45555544332 456666 689999999998 899999999988888888885544333211 1 111111111
Q ss_pred CC----ceeEeccccCCceeEEEECCCCCEEEEec--CCCcEEEEEecC-CCCCCcchhhhhHhhhhcCCceeEEEEeec
Q psy18231 237 TG----QPVRRWREHASKVTCVKFNEDSSVVISGS--QDNTVMMWDVKS-RSHHPIQVRCLNEALKEARDSITSVHSLVK 309 (540)
Q Consensus 237 ~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (540)
.. .....-.+|...|..+ ++++++.+++ .|+.|++|++.. ++.
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~--------------------------- 170 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGG--------------------------- 170 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCE---------------------------
T ss_pred CCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCce---------------------------
Confidence 11 1111112344445443 5666666643 588899998844 320
Q ss_pred ccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-
Q psy18231 310 STKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD- 388 (540)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~- 388 (540)
+..+..|...+..++|++
T Consensus 171 -------------------------------------------------------------~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 171 -------------------------------------------------------------KENQFLMPPEETILTFAEV 189 (356)
T ss_dssp -------------------------------------------------------------EEEEEECCCSSCEEEEEEE
T ss_pred -------------------------------------------------------------eeeeccCCCceeeEEeecc
Confidence 113345666666666665
Q ss_pred ----CeeEeeeCCCeEEEEeCCCCceEEeeeCC-----ceEEEEEecCCcEE------------EeecCCCeEEEEeccc
Q psy18231 389 ----HEILTASLDCRIRRYDIRTGNLVTDYVGE-----PIVDACFTRDCQCI------------LTCSTDECLRLFDKAT 447 (540)
Q Consensus 389 ----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~i~~~~~sp~~~~l------------~~~~~dg~i~i~d~~~ 447 (540)
..|++++.|++|++||++++++++++.++ .+.+++|+|+|+++ ++|+.|++|++||..+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 78999999999999999999999999752 57788999999987 5678899999999999
Q ss_pred cchhhhh-----ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeee-EEEEcCCCcEEEe
Q psy18231 448 GELLEEY-----KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVN-SLCSHPTRKHIMS 521 (540)
Q Consensus 448 ~~~~~~~-----~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~l~~s~d~~~l~s 521 (540)
++.+..+ .+|.... + ..+.++.++++|+.|++|+|||+.+++++.++. +|...+. .++|||||++|++
T Consensus 270 gk~l~v~~~~~p~Gh~~~~--l--sg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~--gH~~~vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRF--L--EGDVKDHCAAAILTSGTIAIWDLLLGQCTALLP--PVSDQHWSFVKWSGTDSHLLA 343 (356)
T ss_dssp TEEEEEEEECCCTTCCCCE--E--EEEEETTEEEEEETTSCEEEEETTTCSEEEEEC--CC--CCCCEEEECSSSSEEEE
T ss_pred CEEEEEEEeeccCCCccee--E--ccccCCCEEEEEcCCCcEEEEECCCCcEEEEec--CCCCCeEEEEEECCCCCEEEE
Confidence 9877654 3565442 3 223337889999999999999999999999998 7877655 6899999999999
Q ss_pred ec-CCeeEEEEcc
Q psy18231 522 AC-GNNVKLWTAE 533 (540)
Q Consensus 522 ~~-d~~i~iw~~~ 533 (540)
|+ |++|+|||+.
T Consensus 344 GS~D~TIklWd~~ 356 (356)
T 2w18_A 344 GQKDGNIFVYHYS 356 (356)
T ss_dssp ECTTSCEEEEEEC
T ss_pred EECCCcEEEecCC
Confidence 99 9999999963
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.5e-31 Score=259.09 Aligned_cols=301 Identities=11% Similarity=0.098 Sum_probs=236.5
Q ss_pred hhhcccccceeeeecccccce--eeeeecCeEEEEeCCCCCEE-EEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEe
Q psy18231 139 ILYELPKEWSIRVYRPLTVNR--ELFVLSGLMHTRFPVDGSYC-LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 215 (540)
Q Consensus 139 ~~~~~~~~~~i~~~~~~~~~~--~~~h~~~v~~v~~spdg~~l-at~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 215 (540)
++...+.++.|++|+..+... ...+...+.+++|+|+|++| ++++.|+.|++||+.+++.+..+..+. .+.+++|+
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~s 82 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS 82 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEEC
Confidence 345567788999999877543 34455679999999999987 577789999999999999999888655 89999999
Q ss_pred eCCCeEEE-eeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEE-EEecCCCcEEEEEecCCCCCCcchhhhhHh
Q psy18231 216 CDSSQIAS-GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV-ISGSQDNTVMMWDVKSRSHHPIQVRCLNEA 293 (540)
Q Consensus 216 p~~~~l~s-~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 293 (540)
|++++|+. ++.++.|++||+.+++.+..+.. ...+.+++|+|+++++ ++++.|+.|++||+.+++.. .
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~--~------- 152 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI--N------- 152 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE--E-------
T ss_pred CCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE--E-------
Confidence 99998754 55679999999999998887765 4578999999999977 68888999999999876410 0
Q ss_pred hhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhh
Q psy18231 294 LKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQA 373 (540)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (540)
.
T Consensus 153 -------------------------------------------------------------------------------~ 153 (391)
T 1l0q_A 153 -------------------------------------------------------------------------------T 153 (391)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------E
Confidence 1
Q ss_pred hhcccccEEEEEecC--Cee-EeeeCCCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEeec---CCCeEEEEecc
Q psy18231 374 LKEARDSITSVHVSD--HEI-LTASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTCS---TDECLRLFDKA 446 (540)
Q Consensus 374 ~~~~~~~v~~l~~~~--~~l-~~~~~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~---~dg~i~i~d~~ 446 (540)
+.. ...+.+++|+| +.+ ++++.++.|++||+++++.+..+.. ..+.+++|+|++++|++++ .++.|++||+.
T Consensus 154 ~~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 154 VSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred Eec-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 111 23457888988 455 6778899999999999988877764 5789999999999999888 68999999999
Q ss_pred ccchhhhhccCcCCcceEEEEecCCCCeE-EEeeCCCcEEEEEecCCcceeEEEecccceeee---EEEEcC--------
Q psy18231 447 TGELLEEYKGHKSGDFRIECCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVN---SLCSHP-------- 514 (540)
Q Consensus 447 ~~~~~~~~~~~~~~v~~~~~~~s~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~---~l~~s~-------- 514 (540)
+++.+..+..|.. +..+ +|+|++++| ++++.|+.|++||+.+++.+..+. .|..+.. .+.+.|
T Consensus 233 ~~~~~~~~~~~~~-~~~~--~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a 307 (391)
T 1l0q_A 233 TNKITARIPVGPD-PAGI--AVTPDGKKVYVALSFXNTVSVIDTATNTITATMA--VGKNPYASGQFIGSIPVQPVYPSA 307 (391)
T ss_dssp TTEEEEEEECCSS-EEEE--EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEECCSSCEEECSSCCCCCBC
T ss_pred CCeEEEEEecCCC-ccEE--EEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEE--CCcCCCccceeeeccccccccccc
Confidence 9988888877654 4444 899999987 677899999999999999988887 4443321 122222
Q ss_pred ----CC----------cEEEeec-CCeeEEEEcccc
Q psy18231 515 ----TR----------KHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 515 ----d~----------~~l~s~~-d~~i~iw~~~~~ 535 (540)
+. ..+...+ |..+++|++.++
T Consensus 308 ~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g 343 (391)
T 1l0q_A 308 DFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDG 343 (391)
T ss_dssp CEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSS
T ss_pred ccccccccccccccceEEEEeCCCCceEEEEECCCC
Confidence 11 3355556 889999999665
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.1e-32 Score=262.59 Aligned_cols=248 Identities=12% Similarity=0.090 Sum_probs=191.2
Q ss_pred EEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEE-EEecC
Q psy18231 190 LWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV-ISGSQ 268 (540)
Q Consensus 190 iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~ 268 (540)
||++.+.+++..+..|...|++++|+|||++|++|+.++ +++||+.+++...... ...+..+++.++++.+ ++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECC
Confidence 567777778888889999999999999999999998775 7899998877665432 2358888999988877 56788
Q ss_pred CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEE
Q psy18231 269 DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMV 348 (540)
Q Consensus 269 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (540)
|++|++||+.+++. +.
T Consensus 80 d~~v~iWd~~~~~~--~~-------------------------------------------------------------- 95 (355)
T 3vu4_A 80 KEVVHIWDDVKKQD--VS-------------------------------------------------------------- 95 (355)
T ss_dssp TTEEEEEETTTTEE--EE--------------------------------------------------------------
T ss_pred ccEEEEEECCCCcE--EE--------------------------------------------------------------
Confidence 89999999987651 00
Q ss_pred EeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCC-ceEEeeeCCceEEEEEecC
Q psy18231 349 LLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTG-NLVTDYVGEPIVDACFTRD 427 (540)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~i~~~~~sp~ 427 (540)
.+ .+...|.++.++++.++++. |+.|++||+.++ +.+..+.. +...+++++
T Consensus 96 ------------------------~~-~~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~- 147 (355)
T 3vu4_A 96 ------------------------RI-KVDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIR-FGGVCEFSN- 147 (355)
T ss_dssp ------------------------EE-ECSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEE-EEEEEEEET-
T ss_pred ------------------------EE-ECCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEecc-CCceEEEEc-
Confidence 11 24568899999997776654 789999999988 66666655 566677888
Q ss_pred CcEEEe--ecCCCeEEEEeccccc----------------hhhhhccCcCCcceEEEEecCCCCeEEEeeCCCc-EEEEE
Q psy18231 428 CQCILT--CSTDECLRLFDKATGE----------------LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGK-IYKWQ 488 (540)
Q Consensus 428 ~~~l~~--~~~dg~i~i~d~~~~~----------------~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~-i~iwd 488 (540)
.++++ |+.||.|++||+.+++ .+..+.+|...|.++ +|+|+|++|++|+.|++ |++||
T Consensus 148 -~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~--~~s~~g~~l~s~s~d~~~v~iwd 224 (355)
T 3vu4_A 148 -GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMV--RLNRKSDMVATCSQDGTIIRVFK 224 (355)
T ss_dssp -TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEE--EECTTSSEEEEEETTCSEEEEEE
T ss_pred -cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEE--EECCCCCEEEEEeCCCCEEEEEE
Confidence 55555 6889999999999865 267889999999888 89999999999999998 99999
Q ss_pred ecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 489 LVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
+.+++++..+....|...|.+++|+|++++|++++ |++|++||++.+
T Consensus 225 ~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 225 TEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 99999999987423899999999999999999999 999999999765
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.9e-31 Score=257.06 Aligned_cols=262 Identities=12% Similarity=0.130 Sum_probs=216.9
Q ss_pred CEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeE-EEeeCCCeEEEEEcCCCceeEeccccCCceeEEE
Q psy18231 177 SYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI-ASGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255 (540)
Q Consensus 177 ~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 255 (540)
..+++++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|++|++||+.+++.+..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 357788999999999999999999998765 48999999999987 677789999999999999988886555 899999
Q ss_pred ECCCCCEEE-EecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeeccccc
Q psy18231 256 FNEDSSVVI-SGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNG 334 (540)
Q Consensus 256 ~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (540)
|+|++++|+ +++.++.|++||+.+++.. .
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~--~------------------------------------------------ 110 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVA--G------------------------------------------------ 110 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEE--E------------------------------------------------
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEE--E------------------------------------------------
Confidence 999999775 5556799999999876510 0
Q ss_pred ceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Cee-EeeeCCCeEEEEeCCCCceE
Q psy18231 335 LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI-LTASLDCRIRRYDIRTGNLV 411 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l-~~~~~dg~i~iwd~~~~~~~ 411 (540)
.+ .+...+.+++|+| +.+ ++++.|+.|++||+.+++.+
T Consensus 111 --------------------------------------~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 111 --------------------------------------TV-KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp --------------------------------------EE-ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred --------------------------------------EE-eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 11 1234578899998 455 67888999999999999988
Q ss_pred EeeeC-CceEEEEEecCCcEE-EeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEee---CCCcEEE
Q psy18231 412 TDYVG-EPIVDACFTRDCQCI-LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGS---SDGKIYK 486 (540)
Q Consensus 412 ~~~~~-~~i~~~~~sp~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s---~dg~i~i 486 (540)
..+.. ..+..++|+|+++++ ++++.++.|++||+++++.+..+..+ ..+..+ +|+|++++|++++ .++.|++
T Consensus 152 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~--~~~~~g~~l~~~~~~~~~~~v~~ 228 (391)
T 1l0q_A 152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE-AAPSGI--AVNPEGTKAYVTNVDKYFNTVSM 228 (391)
T ss_dssp EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SEEEEE--EECTTSSEEEEEEECSSCCEEEE
T ss_pred EEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC-CCccce--EECCCCCEEEEEecCcCCCcEEE
Confidence 88774 578999999999887 57788999999999998877766543 345555 8999999999888 6899999
Q ss_pred EEecCCcceeEEEecccceeeeEEEEcCCCcEE-Eeec-CCeeEEEEcccc
Q psy18231 487 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI-MSAC-GNNVKLWTAEED 535 (540)
Q Consensus 487 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l-~s~~-d~~i~iw~~~~~ 535 (540)
||+.+++.+..+. .|. .+.+++|+|++++| ++++ |+.|++||++++
T Consensus 229 ~d~~~~~~~~~~~--~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 229 IDTGTNKITARIP--VGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EETTTTEEEEEEE--CCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EECCCCeEEEEEe--cCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 9999999888887 444 47899999999887 5667 999999999764
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.6e-32 Score=261.01 Aligned_cols=268 Identities=12% Similarity=0.187 Sum_probs=216.8
Q ss_pred hhhhhcccccceeeeecccc-cc----eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeE
Q psy18231 137 TRILYELPKEWSIRVYRPLT-VN----RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVND 211 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~-~~----~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 211 (540)
...++.++.++.|++|+..+ .. ....|.+.|.+++|+|++++|++++.||.|++||+.+++.+. +..|...|.+
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~ 132 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKT 132 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEE
Confidence 45677888999999999875 22 335589999999999999999999999999999999998776 5569999999
Q ss_pred EEE--eeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhh
Q psy18231 212 ATA--ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRC 289 (540)
Q Consensus 212 l~~--sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 289 (540)
++| +|++++|++++.||.|++||+++++.+..+..|. .+.++.+.+ ..+++++.++.+.+|+++........
T Consensus 133 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~--- 206 (368)
T 3mmy_A 133 IHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRR--- 206 (368)
T ss_dssp EEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEE---
T ss_pred EEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC--CeeEEEeCCCcEEEEEeccccchhhh---
Confidence 999 8899999999999999999999999988887664 667777764 47888888999999999765410000
Q ss_pred hhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccc
Q psy18231 290 LNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNS 369 (540)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (540)
T Consensus 207 -------------------------------------------------------------------------------- 206 (368)
T 3mmy_A 207 -------------------------------------------------------------------------------- 206 (368)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhcccccEEEEEecC----CeeEeeeCCCeEEEEeCCCC---ceEEeeeCC--------------ceEEEEEecCC
Q psy18231 370 CFQALKEARDSITSVHVSD----HEILTASLDCRIRRYDIRTG---NLVTDYVGE--------------PIVDACFTRDC 428 (540)
Q Consensus 370 ~~~~~~~~~~~v~~l~~~~----~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~--------------~i~~~~~sp~~ 428 (540)
......+...+.++...+ ..+++++.||.|++||++.. +.+..+..+ .|.+++|+|++
T Consensus 207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 285 (368)
T 3mmy_A 207 -IESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH 285 (368)
T ss_dssp -CCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT
T ss_pred -ccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCC
Confidence 001112233333444433 33999999999999999987 445555442 59999999999
Q ss_pred cEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc
Q psy18231 429 QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 429 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~ 494 (540)
++|++++.||.|++||+.+++.+..+..|...+..+ +|+|+|++|++++.|+..+.|++.+.+.
T Consensus 286 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~--~~s~~g~~l~~~s~d~~~~~~~~~~~~~ 349 (368)
T 3mmy_A 286 GTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISAC--CFNHNGNIFAYASSYDWSKGHEFYNPQK 349 (368)
T ss_dssp CCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEE--EECTTSSCEEEEECCCSTTCGGGCCTTS
T ss_pred CEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEE--EECCCCCeEEEEecccccccccccCCCc
Confidence 999999999999999999999999999999999888 8999999999999998777666554433
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.5e-32 Score=258.99 Aligned_cols=282 Identities=16% Similarity=0.180 Sum_probs=210.3
Q ss_pred cceeccccchhhhhhcccccceeeeecccccc-------eeeeeecCeEEEEeCC--CCCEEEEeeCCCcEEEEcCCCC-
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRPLTVN-------RELFVLSGLMHTRFPV--DGSYCLTCGSDKKIKLWNPYRN- 196 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~h~~~v~~v~~sp--dg~~lat~~~dg~i~iwd~~~~- 196 (540)
.+.|+++ ...++.++.++.|++|+..+.. ....|.+.|.+++|+| |+++|++++.||+|++||+.++
T Consensus 16 ~~~~~~~---~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 16 DVVYDFY---GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp EEEECSS---SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred EEEEcCC---CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 3445554 3456777889999999987542 1245999999999999 6999999999999999999887
Q ss_pred --------eeEEEeecCCcceeEEEEeeC--CCeEEEeeCCCeEEEEEcCCCceeEecc-------------ccCCceeE
Q psy18231 197 --------LLLKTYGGHAHEVNDATAACD--SSQIASGASDKSVILWEVTTGQPVRRWR-------------EHASKVTC 253 (540)
Q Consensus 197 --------~~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------------~h~~~v~~ 253 (540)
+.+..+.+|...|.+++|+|+ +++|++++.||.|++||+++++.+..+. .|...+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (351)
T 3f3f_A 93 EECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFC 172 (351)
T ss_dssp CTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEE
T ss_pred ccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeE
Confidence 668888899999999999999 9999999999999999999887654433 68889999
Q ss_pred EEECCC---CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeec
Q psy18231 254 VKFNED---SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCK 330 (540)
Q Consensus 254 ~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (540)
++|+|+ +.++++++.|+.+.+|+...++...
T Consensus 173 ~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 206 (351)
T 3f3f_A 173 LSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV---------------------------------------------- 206 (351)
T ss_dssp EEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE----------------------------------------------
T ss_pred EEeccCCCCCcEEEEecCCCcEEEEccCCCceee----------------------------------------------
Confidence 999997 8999999999999777766554111
Q ss_pred ccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCC------eeEeeeCCCeEEEEe
Q psy18231 331 YLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDH------EILTASLDCRIRRYD 404 (540)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~------~l~~~~~dg~i~iwd 404 (540)
...+.+|...|.+++|+|. ++++++.||.|++||
T Consensus 207 ----------------------------------------~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd 246 (351)
T 3f3f_A 207 ----------------------------------------AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFK 246 (351)
T ss_dssp ----------------------------------------EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEE
T ss_pred ----------------------------------------eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEe
Confidence 1145678899999999993 699999999999999
Q ss_pred CCCCceEEeeeC--CceEEEEEecCCcEEEee----cCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEe
Q psy18231 405 IRTGNLVTDYVG--EPIVDACFTRDCQCILTC----STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCG 478 (540)
Q Consensus 405 ~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~ 478 (540)
++++........ ........++....+..+ .....+.+|+....+.+..+.+|...|..+ +|+|++++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~s~~~~~l~s~ 324 (351)
T 3f3f_A 247 ITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSV--SWNLTGTILSSA 324 (351)
T ss_dssp EEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEE--EECSSSCCEEEE
T ss_pred CCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEE--EEcCCCCEEEEe
Confidence 987755444332 223333333433333333 345567788888888899999999999888 899999999999
Q ss_pred eCCCcEEEEEecCCcceeEEE
Q psy18231 479 SSDGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 479 s~dg~i~iwd~~~~~~~~~~~ 499 (540)
+.||.|++||+.+++.+..+.
T Consensus 325 ~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 325 GDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp ETTSCEEEEEECTTSCEEEEE
T ss_pred cCCCcEEEEecCcCcchhhee
Confidence 999999999999987766654
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.8e-31 Score=240.35 Aligned_cols=209 Identities=14% Similarity=0.104 Sum_probs=162.2
Q ss_pred eecCeEEEEeCCC----CCEEEEeeC--------------------CCcEEEEcC-CCCeeEEEeecCCcceeEEEEee-
Q psy18231 163 VLSGLMHTRFPVD----GSYCLTCGS--------------------DKKIKLWNP-YRNLLLKTYGGHAHEVNDATAAC- 216 (540)
Q Consensus 163 h~~~v~~v~~spd----g~~lat~~~--------------------dg~i~iwd~-~~~~~~~~~~~h~~~v~~l~~sp- 216 (540)
|.+.|.+++|+|| ++++++++. |+.|++|++ .+++.+..+.+|...++.++|+|
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 3457888889999 888887553 899999998 55888888889999999999999
Q ss_pred --CCCeEEEeeCCCeEEEEEcCCCceeEeccccC---CceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhh
Q psy18231 217 --DSSQIASGASDKSVILWEVTTGQPVRRWREHA---SKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291 (540)
Q Consensus 217 --~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 291 (540)
++.+|++++.|++|+|||+.+|++++++.+|. ..+.+++|+|+|.++++++.+.. +|+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w~--------------- 252 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KES--------------- 252 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------------------
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cce---------------
Confidence 77999999999999999999999999998654 36778899999999988876433 243
Q ss_pred HhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchh
Q psy18231 292 EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF 371 (540)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (540)
T Consensus 253 -------------------------------------------------------------------------------- 252 (356)
T 2w18_A 253 -------------------------------------------------------------------------------- 252 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeee-----CCceEEEEEecCCcEEEeecCCCeEEEEecc
Q psy18231 372 QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYV-----GEPIVDACFTRDCQCILTCSTDECLRLFDKA 446 (540)
Q Consensus 372 ~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~ 446 (540)
+++|+.|++|++||..+++.+..+. ++....+..+.++.++++++.|++|+|||+.
T Consensus 253 -------------------laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~ 313 (356)
T 2w18_A 253 -------------------ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLL 313 (356)
T ss_dssp ------------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred -------------------eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECC
Confidence 5677789999999999998776542 3322223333447899999999999999999
Q ss_pred ccchhhhhccCcCCcce-EEEEecCCCCeEEEeeCCCcEEEEEe
Q psy18231 447 TGELLEEYKGHKSGDFR-IECCLDSKDSQIFCGSSDGKIYKWQL 489 (540)
Q Consensus 447 ~~~~~~~~~~~~~~v~~-~~~~~s~~~~~l~s~s~dg~i~iwd~ 489 (540)
+++++.++++|...+.. + +|+|||++|++|+.|++|+|||+
T Consensus 314 tGk~l~tL~gH~~~vvs~v--afSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 314 LGQCTALLPPVSDQHWSFV--KWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TCSEEEEECCC--CCCCEE--EECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEecCCCCCeEEEE--EECCCCCEEEEEECCCcEEEecC
Confidence 99999999999876653 5 89999999999999999999996
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.1e-30 Score=255.54 Aligned_cols=241 Identities=14% Similarity=0.119 Sum_probs=201.5
Q ss_pred eeecCeEEEEeCCCCCEE-EEeeCCCcEEEEcCC--CCeeEEEee--cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcC
Q psy18231 162 FVLSGLMHTRFPVDGSYC-LTCGSDKKIKLWNPY--RNLLLKTYG--GHAHEVNDATAACDSSQIASGASDKSVILWEVT 236 (540)
Q Consensus 162 ~h~~~v~~v~~spdg~~l-at~~~dg~i~iwd~~--~~~~~~~~~--~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 236 (540)
.|.+.|.+++|+|++++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|++++|++++.||.|++|++.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecC
Confidence 355579999999999996 899999999999999 888888886 567899999999999999999999999999998
Q ss_pred CCceeE----eccccCCceeEEEECCC---CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeec
Q psy18231 237 TGQPVR----RWREHASKVTCVKFNED---SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVK 309 (540)
Q Consensus 237 ~~~~~~----~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (540)
+++... .+.+|...|.+++|+|+ +++|++++.|++|++||+++++. ..
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~--~~----------------------- 234 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI--VD----------------------- 234 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC--EE-----------------------
T ss_pred CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce--ee-----------------------
Confidence 887554 77899999999999999 99999999999999999987652 00
Q ss_pred ccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEec-C
Q psy18231 310 STKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVS-D 388 (540)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~ 388 (540)
..+.+|...|.+++|+ .
T Consensus 235 --------------------------------------------------------------~~~~~h~~~v~~~~~sd~ 252 (450)
T 2vdu_B 235 --------------------------------------------------------------KWLFGHKHFVSSICCGKD 252 (450)
T ss_dssp --------------------------------------------------------------EECCCCSSCEEEEEECST
T ss_pred --------------------------------------------------------------eeecCCCCceEEEEECCC
Confidence 0134688999999997 4
Q ss_pred CeeEeeeCCCeEEEEeCCCCceEEeeeC---------------------------CceEEEEEecCCcEEEeec-CCCeE
Q psy18231 389 HEILTASLDCRIRRYDIRTGNLVTDYVG---------------------------EPIVDACFTRDCQCILTCS-TDECL 440 (540)
Q Consensus 389 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------------------------~~i~~~~~sp~~~~l~~~~-~dg~i 440 (540)
.+|++++.|+.|++||+++++.+..+.. ..+.+++|+|++++|++++ .|+.|
T Consensus 253 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i 332 (450)
T 2vdu_B 253 YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCI 332 (450)
T ss_dssp TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeE
Confidence 8999999999999999999998777652 3588999999999999998 89999
Q ss_pred EEEec--ccc---chhhhhccCcCCcceEEEEecCCCCeEEEeeC------CCcEEEEEecCC
Q psy18231 441 RLFDK--ATG---ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS------DGKIYKWQLVDS 492 (540)
Q Consensus 441 ~i~d~--~~~---~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~------dg~i~iwd~~~~ 492 (540)
++||+ .++ +.+..+..| ..+..+ +|+|++.++++++. +..|.+|.+...
T Consensus 333 ~iw~~~~~~~~~l~~~~~~~~~-~~v~~~--~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 333 IILEMSEKQKGDLALKQIITFP-YNVISL--SAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEEECSSSTTCEEEEEEEECS-SCEEEE--EEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEEeccCCCCceeeccEeccC-CceEEE--EecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 99999 555 666777777 666666 89996544444443 556899987543
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7.3e-31 Score=249.17 Aligned_cols=256 Identities=11% Similarity=0.069 Sum_probs=201.3
Q ss_pred hhhhhcccccceeeeeccccccee-eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCC---------CCeeEEEee-cC
Q psy18231 137 TRILYELPKEWSIRVYRPLTVNRE-LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPY---------RNLLLKTYG-GH 205 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~~~-~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~---------~~~~~~~~~-~h 205 (540)
...+++++.|++|++|+..+.... ......|.++.|+|+ +++++.|++|++|+.. +++.+..+. +|
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS 124 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC
Confidence 345678899999999998876532 223678999999998 9999999999999655 455455544 67
Q ss_pred CcceeEEEEee--CCCeEEEeeCCCeEEEEEcCCCceeEecc-ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCC
Q psy18231 206 AHEVNDATAAC--DSSQIASGASDKSVILWEVTTGQPVRRWR-EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282 (540)
Q Consensus 206 ~~~v~~l~~sp--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 282 (540)
.+.|.+++|+| ++++|++++.||+|++||+++++.+.... .|...|.+++|+|++.+|++|+.||.|++||+++++.
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 78999999999 99999999999999999999999876654 4566899999999999999999999999999998763
Q ss_pred CCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccc
Q psy18231 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVT 362 (540)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (540)
..
T Consensus 205 ~~------------------------------------------------------------------------------ 206 (343)
T 3lrv_A 205 AS------------------------------------------------------------------------------ 206 (343)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred ccccccchhhhhhc-ccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC-----Cce--EEEEEecCCcEEE
Q psy18231 363 PISIHNSCFQALKE-ARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG-----EPI--VDACFTRDCQCIL 432 (540)
Q Consensus 363 ~~~~~~~~~~~~~~-~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~i--~~~~~sp~~~~l~ 432 (540)
..+.. |...|.+++|+| .+|++++ |+.|++||+++++.+..+.. ..+ .+++|+|+|++|+
T Consensus 207 ---------~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 276 (343)
T 3lrv_A 207 ---------SRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMI 276 (343)
T ss_dssp ---------EECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEE
T ss_pred ---------cEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEE
Confidence 12344 889999999998 6788888 55999999999877655442 233 3699999999999
Q ss_pred eecC-CCeEEEEeccccchhhhhccCcCCcceEEEEecC---CCCeEEEeeCCCcEEEEEe
Q psy18231 433 TCST-DECLRLFDKATGELLEEYKGHKSGDFRIECCLDS---KDSQIFCGSSDGKIYKWQL 489 (540)
Q Consensus 433 ~~~~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~---~~~~l~s~s~dg~i~iwd~ 489 (540)
+++. |+.+++|++.+....... .++..+ +|++ +...+++++.||.+.++-.
T Consensus 277 ~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 277 AYSNESNSLTIYKFDKKTKNWTK----DEESAL--CLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEETTTTEEEEEEECTTTCSEEE----EEEEEC--CC----CCCCEEEEEEETTEEEEEEE
T ss_pred EecCCCCcEEEEEEcccccceEe----cCceeE--ecCccccccceeEEEecCCceEEEEe
Confidence 9988 999999998765432221 223334 6777 8889999999999998863
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=7.8e-29 Score=247.89 Aligned_cols=308 Identities=12% Similarity=0.099 Sum_probs=240.7
Q ss_pred hhhhcccccceeeeeccccccee--eeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcC--CCCeeEEEeecCCcceeEEE
Q psy18231 138 RILYELPKEWSIRVYRPLTVNRE--LFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNP--YRNLLLKTYGGHAHEVNDAT 213 (540)
Q Consensus 138 ~~~~~~~~~~~i~~~~~~~~~~~--~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~ 213 (540)
.++.+...+++|.+|+..+.... +.....+..++|+|||++|++++.|++|++||+ .+++.+.++. +...+..++
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va 228 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVE 228 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEE
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEE
Confidence 45566778899999998776532 221234889999999999999999999999999 8899998888 456789999
Q ss_pred Eee----CCCeEEEeeC-CCeEEEEEcCCCceeEeccc----------cC-CceeEEEECCCCC-EEEEecCCCcEEEEE
Q psy18231 214 AAC----DSSQIASGAS-DKSVILWEVTTGQPVRRWRE----------HA-SKVTCVKFNEDSS-VVISGSQDNTVMMWD 276 (540)
Q Consensus 214 ~sp----~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~----------h~-~~v~~~~~~~~~~-~l~s~~~dg~i~iwd 276 (540)
|+| ||++|++++. +++|.+||..+++++..+.. |. ..+..+.++|++. ++++...++.|.+||
T Consensus 229 ~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd 308 (543)
T 1nir_A 229 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN 308 (543)
T ss_dssp ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred eCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEE
Confidence 999 9999999885 89999999999999887754 22 3789999999765 566777899999999
Q ss_pred ecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccce
Q psy18231 277 VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
+.+.+....
T Consensus 309 ~~~~~~l~~----------------------------------------------------------------------- 317 (543)
T 1nir_A 309 YKDIDNLTV----------------------------------------------------------------------- 317 (543)
T ss_dssp CTTSSSCEE-----------------------------------------------------------------------
T ss_pred ecCCCccee-----------------------------------------------------------------------
Confidence 987642000
Q ss_pred ecccccccccccchhhhhhcccccEEEEEecC--CeeEe-eeCCCeEEEEeCCCCceEEeeeC----CceEEEE-EecC-
Q psy18231 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILT-ASLDCRIRRYDIRTGNLVTDYVG----EPIVDAC-FTRD- 427 (540)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~-~~~dg~i~iwd~~~~~~~~~~~~----~~i~~~~-~sp~- 427 (540)
....+...+.++.|+| +++++ +..+++|.+||..+++++..+.. ++-..+. ++|+
T Consensus 318 ----------------~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~ 381 (543)
T 1nir_A 318 ----------------TSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKY 381 (543)
T ss_dssp ----------------EEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTT
T ss_pred ----------------EEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCC
Confidence 0001234456778888 55554 45689999999999999887763 3211222 4777
Q ss_pred CcEEEeec-CCCeEEEEeccc-------cchhhhhccCcCCcceEEEEecCCCCeEEEee-------CCCcEEEEEecCC
Q psy18231 428 CQCILTCS-TDECLRLFDKAT-------GELLEEYKGHKSGDFRIECCLDSKDSQIFCGS-------SDGKIYKWQLVDS 492 (540)
Q Consensus 428 ~~~l~~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s-------~dg~i~iwd~~~~ 492 (540)
+..++++. .|++|.+||+.+ +++++++..|...+..+ +++|++++|++++ .+++|.+||+.++
T Consensus 382 g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v--~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 382 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFI--KTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE--ECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEE--EcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence 66667765 589999999988 78899999998777777 8999999999987 3789999999999
Q ss_pred cce-eEEEe------cccceeeeEEEEcCCCcEEEee-----c-CCeeEEEEcccc
Q psy18231 493 SQI-STLIH------SVGKAVVNSLCSHPTRKHIMSA-----C-GNNVKLWTAEED 535 (540)
Q Consensus 493 ~~~-~~~~~------~~~~~~v~~l~~s~d~~~l~s~-----~-d~~i~iw~~~~~ 535 (540)
+.. ..+.. ..+...+..+.|+|+|+.|..+ + |+.|.|||.+++
T Consensus 460 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 460 DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp TSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 887 44421 1457789999999999998865 4 699999999875
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=2.5e-29 Score=246.95 Aligned_cols=269 Identities=8% Similarity=0.028 Sum_probs=220.6
Q ss_pred cceeccccchhhhhhcccccceeeeecccccceee--------eeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCee
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRPLTVNREL--------FVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLL 198 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~ 198 (540)
.+.+++ ...+++....++.|++|+..+..... .|.+.|.+++|+|+++++++++.|+.|++||+.+++.
T Consensus 127 ~~~~s~---~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~ 203 (433)
T 3bws_A 127 SVRFID---NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAY 203 (433)
T ss_dssp CCEESS---SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE
T ss_pred EEEEeC---CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceE
Confidence 344554 24556666778889999988755433 4777999999999999999999999999999999999
Q ss_pred EEEeecCCcceeEEEEeeCCCeEE-EeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEec--------CC
Q psy18231 199 LKTYGGHAHEVNDATAACDSSQIA-SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS--------QD 269 (540)
Q Consensus 199 ~~~~~~h~~~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--------~d 269 (540)
+..+..|...+.+++|+|++++++ +++.|+.|++||+.+++.+..+..+ ..+.+++|+|+++++++++ .|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 204 KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 999999999999999999999885 5557999999999999988887654 4599999999999999888 58
Q ss_pred CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEE
Q psy18231 270 NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVL 349 (540)
Q Consensus 270 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (540)
|.|++||+.+++. .
T Consensus 283 g~i~~~d~~~~~~--~---------------------------------------------------------------- 296 (433)
T 3bws_A 283 GRLGIYSMDKEKL--I---------------------------------------------------------------- 296 (433)
T ss_dssp EEEEEEETTTTEE--E----------------------------------------------------------------
T ss_pred CeEEEEECCCCcE--E----------------------------------------------------------------
Confidence 8999999987641 0
Q ss_pred eecccceecccccccccccchhhhhhcccccEEEEEecC--C-eeEeeeCCCeEEEEeCCCCceEEeeeC-CceEEEEEe
Q psy18231 350 LDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--H-EILTASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFT 425 (540)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~-~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~s 425 (540)
....|...+.+++|+| + .+++++.|+.|++||+++++.+..+.. ..+.+++|+
T Consensus 297 -----------------------~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s 353 (433)
T 3bws_A 297 -----------------------DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALS 353 (433)
T ss_dssp -----------------------EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred -----------------------eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEc
Confidence 1113445677889988 3 456668999999999999988877764 679999999
Q ss_pred cCCcEEEeecC---------------CCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeC-CCcEEEEEe
Q psy18231 426 RDCQCILTCST---------------DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 489 (540)
Q Consensus 426 p~~~~l~~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~-dg~i~iwd~ 489 (540)
|+++++++++. ||.|++||+.+++.+..+..+. .+..+ +|+|+|++|++++. |+.|++|++
T Consensus 354 ~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~-~~~~~--~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 354 PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN-QPTGL--DVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS-SEEEE--EECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC-CCceE--EEcCCCCEEEEEECCCCeEEEEEe
Confidence 99998888776 5799999999999888877643 45555 89999999988775 999999998
Q ss_pred cC
Q psy18231 490 VD 491 (540)
Q Consensus 490 ~~ 491 (540)
..
T Consensus 431 ~~ 432 (433)
T 3bws_A 431 DG 432 (433)
T ss_dssp TT
T ss_pred cC
Confidence 63
No 127
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=8.8e-30 Score=246.04 Aligned_cols=243 Identities=9% Similarity=0.058 Sum_probs=178.8
Q ss_pred hhhhhcccccceeeeecccccce--------eeeeecCeEEEEeCC--------CCCEEEEeeCCCcEEEEcCCCCeeEE
Q psy18231 137 TRILYELPKEWSIRVYRPLTVNR--------ELFVLSGLMHTRFPV--------DGSYCLTCGSDKKIKLWNPYRNLLLK 200 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~~--------~~~h~~~v~~v~~sp--------dg~~lat~~~dg~i~iwd~~~~~~~~ 200 (540)
...+++.+.|++|++|+...... ..+|.+.|++++|+| |+++||+|+.|++|+|||+.++.++.
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~ 180 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPIL 180 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceee
Confidence 45677889999999999876532 235999999999998 89999999999999999999988888
Q ss_pred EeecCCcceeEEEEeeCCC-eEEEeeCCCeEEEEEcCCCceeEe-------------------------ccccCCceeEE
Q psy18231 201 TYGGHAHEVNDATAACDSS-QIASGASDKSVILWEVTTGQPVRR-------------------------WREHASKVTCV 254 (540)
Q Consensus 201 ~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~~~-------------------------~~~h~~~v~~~ 254 (540)
.+.+|...|.+++|+|++. +|++++.|++|++||+.+++.... ..+|...+.++
T Consensus 181 ~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v 260 (393)
T 4gq1_A 181 AGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANV 260 (393)
T ss_dssp EEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEE
T ss_pred eecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceee
Confidence 8888999999999999874 799999999999999988754322 23577889999
Q ss_pred EEC-CCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccc
Q psy18231 255 KFN-EDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLN 333 (540)
Q Consensus 255 ~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (540)
.|+ ++++.|++++.|+++++||+..++.
T Consensus 261 ~~~~~dg~~l~s~s~d~~i~vwd~~~~~~--------------------------------------------------- 289 (393)
T 4gq1_A 261 RWIGSDGSGILAMCKSGAWLRWNLFANND--------------------------------------------------- 289 (393)
T ss_dssp EEETTTTCEEEEECTTSEEEEEEC--------------------------------------------------------
T ss_pred eeecCCCCEEEEEeCCCCEEEEECccCCC---------------------------------------------------
Confidence 986 7999999999999999999987652
Q ss_pred cceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEe
Q psy18231 334 GLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTD 413 (540)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 413 (540)
...+..|...+..+.+.+..--...
T Consensus 290 -------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~------------------ 314 (393)
T 4gq1_A 290 -------------------------------------YNEISDSTMKLGPKNLLPNVQGISL------------------ 314 (393)
T ss_dssp ---------------------------------------------------CCSCSEEEECS------------------
T ss_pred -------------------------------------CceEeeecCccccEEEccccccccc------------------
Confidence 0122233344444444442111100
Q ss_pred eeCCceEEEEEec--CCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEec
Q psy18231 414 YVGEPIVDACFTR--DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490 (540)
Q Consensus 414 ~~~~~i~~~~~sp--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~ 490 (540)
........++| ++.++++|+.||.|++||+.+++.+..+..|..+|..+ +|+|||++||+++.+| +.+|++.
T Consensus 315 --~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~sv--afspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 315 --FPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDF--CWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp --SCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEE--EECTTSSEEEEEESSE-EEEEEEG
T ss_pred --cCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEE--EEcCCCCEEEEEeCCC-eEEEEEe
Confidence 01122233343 55677888999999999999999988888899988887 9999999999998776 6666653
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=5.7e-28 Score=241.64 Aligned_cols=281 Identities=10% Similarity=0.087 Sum_probs=219.8
Q ss_pred EeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEc--CCCceeEeccccC
Q psy18231 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV--TTGQPVRRWREHA 248 (540)
Q Consensus 171 ~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~--~~~~~~~~~~~h~ 248 (540)
+|+|++.++++++.|++|.+||..+++++.++..+.. +.+++|+|||++|++++.|++|.+||+ .+++.+..+. +.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IG 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cC
Confidence 4899999999999999999999999999999984333 889999999999999999999999999 8888888886 45
Q ss_pred CceeEEEECC----CCCEEEEecC-CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeE
Q psy18231 249 SKVTCVKFNE----DSSVVISGSQ-DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKL 323 (540)
Q Consensus 249 ~~v~~~~~~~----~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (540)
..+..++|+| +|+++++++. +++|.+||..+.+.....
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i------------------------------------- 264 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV------------------------------------- 264 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE-------------------------------------
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceee-------------------------------------
Confidence 6689999999 9999999885 899999998876521000
Q ss_pred EEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhccc-ccEEEEEecC---CeeEeeeCCCe
Q psy18231 324 VFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEAR-DSITSVHVSD---HEILTASLDCR 399 (540)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~l~~~~---~~l~~~~~dg~ 399 (540)
... +........|. ..+.++.+++ .++++...++.
T Consensus 265 ---------------------------~~~--------------g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~ 303 (543)
T 1nir_A 265 ---------------------------STR--------------GMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 303 (543)
T ss_dssp ---------------------------ECC--------------EECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred ---------------------------ccc--------------CcccCccccccCCceEEEEECCCCCEEEEEECCCCe
Confidence 000 00000001122 3678888887 45677788999
Q ss_pred EEEEeCCCCceEE--eee-CCceEEEEEecCCcEEEee-cCCCeEEEEeccccchhhhhcc----CcCCcceEEEEecCC
Q psy18231 400 IRRYDIRTGNLVT--DYV-GEPIVDACFTRDCQCILTC-STDECLRLFDKATGELLEEYKG----HKSGDFRIECCLDSK 471 (540)
Q Consensus 400 i~iwd~~~~~~~~--~~~-~~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~s~~ 471 (540)
|.+||..+.+.+. .+. +..+..+.|+|+|++++++ ..+++|.+||..+++++..+.. |.+.. ..+ ++|+
T Consensus 304 i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g--~~~-~~p~ 380 (543)
T 1nir_A 304 VLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRG--ANF-VHPK 380 (543)
T ss_dssp EEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTC--EEE-EETT
T ss_pred EEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCC--ccc-CCCC
Confidence 9999998876443 333 3568889999999977655 4689999999999998887764 44322 322 4677
Q ss_pred -CCeEEEee-CCCcEEEEEecC-------CcceeEEEecccceeeeEEEEcCCCcEEEeec--------CCeeEEEEccc
Q psy18231 472 -DSQIFCGS-SDGKIYKWQLVD-------SSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC--------GNNVKLWTAEE 534 (540)
Q Consensus 472 -~~~l~s~s-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~--------d~~i~iw~~~~ 534 (540)
+..++++. .|++|.+||+.+ .+.++++. .|...+..++|+||+++|++++ +++|.+||+++
T Consensus 381 ~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~--~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 381 YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ--GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE--CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred CccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE--cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 66677765 689999999988 88899998 7888889999999999999986 56999999986
Q ss_pred cc
Q psy18231 535 DY 536 (540)
Q Consensus 535 ~~ 536 (540)
..
T Consensus 459 ~~ 460 (543)
T 1nir_A 459 LD 460 (543)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=6.7e-28 Score=234.14 Aligned_cols=272 Identities=12% Similarity=0.047 Sum_probs=213.1
Q ss_pred eeeeecc--cccce-----eeeeecCeEEEEeCC--------------CCCEEEEeeCC------CcEEEEcCCCCeeEE
Q psy18231 148 SIRVYRP--LTVNR-----ELFVLSGLMHTRFPV--------------DGSYCLTCGSD------KKIKLWNPYRNLLLK 200 (540)
Q Consensus 148 ~i~~~~~--~~~~~-----~~~h~~~v~~v~~sp--------------dg~~lat~~~d------g~i~iwd~~~~~~~~ 200 (540)
++++|+. .+... ..+|...+..+++++ .+..++.++.+ +.|++||+. +....
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~ 172 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQF 172 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCE
Confidence 8999999 66543 345777788777775 25566665544 799999986 45567
Q ss_pred EeecCCcceeEEEEeeCCCeEEEeeCCC---eEEEEEcCCCceeEeccccCCceeEEEECCCCCEEE-EecCCCc--EEE
Q psy18231 201 TYGGHAHEVNDATAACDSSQIASGASDK---SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI-SGSQDNT--VMM 274 (540)
Q Consensus 201 ~~~~h~~~v~~l~~sp~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~--i~i 274 (540)
.+.+|...|.+++|+|||++|++++.++ .|++||+.+++.. .+..|...+.+++|+|||++|+ +++.|+. |++
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~ 251 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 251 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEE
Confidence 7888999999999999999999999885 9999999998875 4667888999999999999887 6666655 899
Q ss_pred EEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeeccc
Q psy18231 275 WDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLG 354 (540)
Q Consensus 275 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (540)
||+.+++.
T Consensus 252 ~d~~~~~~------------------------------------------------------------------------ 259 (415)
T 2hqs_A 252 MDLASGQI------------------------------------------------------------------------ 259 (415)
T ss_dssp EETTTCCE------------------------------------------------------------------------
T ss_pred EECCCCCE------------------------------------------------------------------------
Confidence 99877651
Q ss_pred ceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeC-CC--eEEEEeCCCCceEEe-eeCCceEEEEEecCC
Q psy18231 355 STQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASL-DC--RIRRYDIRTGNLVTD-YVGEPIVDACFTRDC 428 (540)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~-dg--~i~iwd~~~~~~~~~-~~~~~i~~~~~sp~~ 428 (540)
..+..|...+.+++|+| +.|++++. ++ .|.+||+.+++.... ..+..+.+++|+|+|
T Consensus 260 -----------------~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG 322 (415)
T 2hqs_A 260 -----------------RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDG 322 (415)
T ss_dssp -----------------EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTS
T ss_pred -----------------EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCC
Confidence 13345667889999998 66777765 44 688889988775432 234678899999999
Q ss_pred cEEEeecCC---CeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCC---cEEEEEecCCcceeEEEecc
Q psy18231 429 QCILTCSTD---ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG---KIYKWQLVDSSQISTLIHSV 502 (540)
Q Consensus 429 ~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~ 502 (540)
++|++++.+ ..|++||+.+++.. .+..+. .+..+ +|+|+|++|++++.++ .|++||+. ++....+. .
T Consensus 323 ~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~--~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~--~ 395 (415)
T 2hqs_A 323 KFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETP--SLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLP--A 395 (415)
T ss_dssp SEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEE--EECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECC--C
T ss_pred CEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCe--EEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEee--C
Confidence 999988764 58999999988763 455454 55555 8999999999988877 79999975 66667776 8
Q ss_pred cceeeeEEEEcCCCc
Q psy18231 503 GKAVVNSLCSHPTRK 517 (540)
Q Consensus 503 ~~~~v~~l~~s~d~~ 517 (540)
|.+.|.+++|+|...
T Consensus 396 ~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 396 TDGQVKFPAWSPYLH 410 (415)
T ss_dssp SSSEEEEEEECCCCC
T ss_pred CCCCCcCCccccccc
Confidence 999999999999754
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=2.6e-28 Score=236.98 Aligned_cols=275 Identities=11% Similarity=0.056 Sum_probs=212.6
Q ss_pred eecCeEEEEeCCCCC-EEEEee----CCC----cEEEEcC--CCCeeE--EEeecCCcceeEEEEee-------------
Q psy18231 163 VLSGLMHTRFPVDGS-YCLTCG----SDK----KIKLWNP--YRNLLL--KTYGGHAHEVNDATAAC------------- 216 (540)
Q Consensus 163 h~~~v~~v~~spdg~-~lat~~----~dg----~i~iwd~--~~~~~~--~~~~~h~~~v~~l~~sp------------- 216 (540)
+...+....|++.|. ++++|+ .+| +++|||+ .+++.+ ..+.+|...+..+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 345778888888775 555775 467 9999999 898877 45888998888888775
Q ss_pred -CCCeEEEeeCC------CeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCC---cEEEEEecCCCCCCcc
Q psy18231 217 -DSSQIASGASD------KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN---TVMMWDVKSRSHHPIQ 286 (540)
Q Consensus 217 -~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~ 286 (540)
.+..++.++.+ ++|++||+. +.....+..|...+.+++|+|+|++|++++.++ .|++||+.+++..
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~--- 216 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--- 216 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---
Confidence 15667766654 799999996 455677788999999999999999999999875 9999999877520
Q ss_pred hhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccccc
Q psy18231 287 VRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI 366 (540)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (540)
T Consensus 217 -------------------------------------------------------------------------------- 216 (415)
T 2hqs_A 217 -------------------------------------------------------------------------------- 216 (415)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhcccccEEEEEecC--CeeE-eeeCCCe--EEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecC-CC
Q psy18231 367 HNSCFQALKEARDSITSVHVSD--HEIL-TASLDCR--IRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCST-DE 438 (540)
Q Consensus 367 ~~~~~~~~~~~~~~v~~l~~~~--~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~-dg 438 (540)
.+..|...+.+++|+| +.|+ +++.++. |++||+++++.. .+.. ..+.+++|+|||++|++++. ++
T Consensus 217 ------~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~l~~~s~~~g 289 (415)
T 2hqs_A 217 ------QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAG 289 (415)
T ss_dssp ------EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred ------EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcCCCCcccceEECCCCCEEEEEECCCC
Confidence 2234566788999998 5566 6666554 999999988764 3333 57899999999999988876 44
Q ss_pred --eEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCC---CcEEEEEecCCcceeEEEecccceeeeEEEEc
Q psy18231 439 --CLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD---GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 513 (540)
Q Consensus 439 --~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 513 (540)
.|++||+.+++. ..+..+...+..+ +|+|+|++|++++.+ ..|++||+.+++.. .+. .+. .+.+++|+
T Consensus 290 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~--~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~--~~~-~~~~~~~s 362 (415)
T 2hqs_A 290 RPQVYKVNINGGAP-QRITWEGSQNQDA--DVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLS--STF-LDETPSLA 362 (415)
T ss_dssp SCEEEEEETTSSCC-EECCCSSSEEEEE--EECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECC--CSS-SCEEEEEC
T ss_pred CcEEEEEECCCCCE-EEEecCCCcccCe--EECCCCCEEEEEECcCCceEEEEEECCCCCEE-Eec--CCC-CcCCeEEc
Confidence 688889887764 3344455545444 899999999988764 58999999888763 444 443 89999999
Q ss_pred CCCcEEEeec-CC---eeEEEEcccc
Q psy18231 514 PTRKHIMSAC-GN---NVKLWTAEED 535 (540)
Q Consensus 514 ~d~~~l~s~~-d~---~i~iw~~~~~ 535 (540)
|||++|++++ |+ .|++|++.++
T Consensus 363 pdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 363 PNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred CCCCEEEEEEcCCCccEEEEEECCCC
Confidence 9999999988 66 7999998754
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=9.8e-27 Score=244.54 Aligned_cols=291 Identities=12% Similarity=0.035 Sum_probs=214.7
Q ss_pred ecCeEEEEeCCCCCEEEEeeC-CC-----cEEEEcCCCCeeEEEeecCCc------------------------ceeEEE
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGS-DK-----KIKLWNPYRNLLLKTYGGHAH------------------------EVNDAT 213 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~-dg-----~i~iwd~~~~~~~~~~~~h~~------------------------~v~~l~ 213 (540)
...+.+++|||||++|++++. |+ .|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457899999999999999988 88 999999999988777765433 388999
Q ss_pred EeeCCCeEEEeeCCCeEEEEEcCCCc--eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhh
Q psy18231 214 AACDSSQIASGASDKSVILWEVTTGQ--PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291 (540)
Q Consensus 214 ~sp~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 291 (540)
|||||++|++++. +.|.+||+.++. ....+..|...+..++|+|||++|++++ ++.|.+||+.+++...+...
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~--- 190 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD--- 190 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC---
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC---
Confidence 9999999999987 999999998883 4455777888999999999999999987 56999999987652111000
Q ss_pred HhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchh
Q psy18231 292 EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF 371 (540)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (540)
. ...+ .. +. ..
T Consensus 191 -------------------~--------------------------------~~~~-~~---g~--------------~~ 201 (741)
T 2ecf_A 191 -------------------G--------------------------------STTI-GN---GI--------------AE 201 (741)
T ss_dssp -------------------C--------------------------------CSSE-EE---SC--------------CC
T ss_pred -------------------C--------------------------------ccce-ec---cc--------------cc
Confidence 0 0000 00 00 00
Q ss_pred hhhhcccccEEEEEecC--CeeEeeeCCC---------------------------------eEEEEeCCC-CceEEeee
Q psy18231 372 QALKEARDSITSVHVSD--HEILTASLDC---------------------------------RIRRYDIRT-GNLVTDYV 415 (540)
Q Consensus 372 ~~~~~~~~~v~~l~~~~--~~l~~~~~dg---------------------------------~i~iwd~~~-~~~~~~~~ 415 (540)
.........+.+++|+| +.|++++.|+ .|++||+.+ ++......
T Consensus 202 ~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 281 (741)
T 2ecf_A 202 FVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDL 281 (741)
T ss_dssp HHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECC
T ss_pred eeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecC
Confidence 00011123356788888 6677776655 789999998 77654432
Q ss_pred ----CCceEEEEEecCCcEEEeecC-----CCeEEEEeccccchhhhhccCcC----CcceEEEEecCCCCeEEEeeCCC
Q psy18231 416 ----GEPIVDACFTRDCQCILTCST-----DECLRLFDKATGELLEEYKGHKS----GDFRIECCLDSKDSQIFCGSSDG 482 (540)
Q Consensus 416 ----~~~i~~~~~sp~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~s~~~~~l~s~s~dg 482 (540)
...+..++| |||++|++++. +..|++||+.+++....+..+.. .+..+ +|+|||+++++++.||
T Consensus 282 ~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~--~~spdg~~~~~~~~~g 358 (741)
T 2ecf_A 282 GKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL--RFLDDGSILWSSERTG 358 (741)
T ss_dssp CSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC--EECTTSCEEEEECTTS
T ss_pred CCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce--EECCCCeEEEEecCCC
Confidence 246899999 99999987653 67899999999887766665543 23445 8999999999999999
Q ss_pred cEEEEEec-CCcceeEEEecccceeeeEE-EEcCCCcEEEe-ec-CC--eeEEEEccc
Q psy18231 483 KIYKWQLV-DSSQISTLIHSVGKAVVNSL-CSHPTRKHIMS-AC-GN--NVKLWTAEE 534 (540)
Q Consensus 483 ~i~iwd~~-~~~~~~~~~~~~~~~~v~~l-~~s~d~~~l~s-~~-d~--~i~iw~~~~ 534 (540)
.+++|.+. +++ ...+. .|...+..+ .|+||++.|+. ++ ++ .++||+++.
T Consensus 359 ~~~l~~~~~~~~-~~~l~--~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 359 FQHLYRIDSKGK-AAALT--HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp SCEEEEECSSSC-EEESC--CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred ccEEEEEcCCCC-eeeee--ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 88888876 445 56665 677778887 59999987765 44 55 899999864
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=3.1e-26 Score=240.77 Aligned_cols=307 Identities=9% Similarity=0.032 Sum_probs=205.9
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe--eEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEe
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL--LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRR 243 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 243 (540)
.|.+++|||||++|++++. +.|.+||+.++. ....+..|...+.+++|||||++|+.++. +.|.+||+.+++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEe
Confidence 3889999999999999885 999999998873 44557778889999999999999999874 6999999998877665
Q ss_pred ccccCCc----------------eeEEEECCCCCEEEEecCCC-cEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEE
Q psy18231 244 WREHASK----------------VTCVKFNEDSSVVISGSQDN-TVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHS 306 (540)
Q Consensus 244 ~~~h~~~----------------v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (540)
...+... +..++|+|||++|++++.|+ .+..|+..... +. ......
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~--p~---------------~~~~~~ 250 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVY--AD---------------RTDVIE 250 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEEC--SS---------------CEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCC--CC---------------cccceE
Confidence 5444432 47899999999999887654 33333311000 00 000000
Q ss_pred eecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeeccc-ceecccccccccccchhhhhhcccccEEEEE
Q psy18231 307 LVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLG-STQIGDVTPISIHNSCFQALKEARDSITSVH 385 (540)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 385 (540)
+.....+. ......+.+++..+ ..... +.....|...+..++
T Consensus 251 ~~~~~~g~--------------------------~~~~~~l~~~d~~~~~~~~~-----------~~~~~~~~~~~~~~~ 293 (741)
T 2ecf_A 251 QRYPAAGD--------------------------ANVQVKLGVISPAEQAQTQW-----------IDLGKEQDIYLARVN 293 (741)
T ss_dssp EECCBTTS--------------------------CCCEEEEEEECSSTTCCCEE-----------ECCCSCSSEEEEEEE
T ss_pred eecCCCCC--------------------------CCCeeEEEEEECCCCCceEE-----------ecCCCCcceEEEEEE
Confidence 00000000 00011222222221 11000 000114667888999
Q ss_pred ecC--CeeEeeeC-----CCeEEEEeCCCCceEEeeeCC------ceEEEEEecCCcEEEeecCCCeEEEEecc-ccchh
Q psy18231 386 VSD--HEILTASL-----DCRIRRYDIRTGNLVTDYVGE------PIVDACFTRDCQCILTCSTDECLRLFDKA-TGELL 451 (540)
Q Consensus 386 ~~~--~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~------~i~~~~~sp~~~~l~~~~~dg~i~i~d~~-~~~~~ 451 (540)
| | +.|++++. +..|++||+.+++....+..+ .+..++|+|||+++++++.||.++||.+. +++ .
T Consensus 294 ~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~ 371 (741)
T 2ecf_A 294 W-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-A 371 (741)
T ss_dssp E-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-E
T ss_pred e-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-e
Confidence 9 8 66775543 578999999999876655431 45689999999999999999988887665 344 6
Q ss_pred hhhccCcCCcceEEEEecCCCCeEE-EeeCCC--cEEEEEecC-CcceeEEEecccceeeeEEEEcCCCcEEEeec-C--
Q psy18231 452 EEYKGHKSGDFRIECCLDSKDSQIF-CGSSDG--KIYKWQLVD-SSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-G-- 524 (540)
Q Consensus 452 ~~~~~~~~~v~~~~~~~s~~~~~l~-s~s~dg--~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d-- 524 (540)
..+..|...+..+. .|+|+|+.|+ +++.++ .+++|++.. ++....+. . ...+..++|||||++|+... +
T Consensus 372 ~~l~~~~~~v~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~--~-~~~~~~~~~spdg~~l~~~~~~~~ 447 (741)
T 2ecf_A 372 AALTHGNWSVDELL-AVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS--K-APGMHSASFARNASVYVDSWSNNS 447 (741)
T ss_dssp EESCCSSSCEEEEE-EEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC--C-SCSEEEEEECTTSSEEEEEEEETT
T ss_pred eeeeecceEEEeEe-EEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc--c-CCCceEEEECCCCCEEEEEecCCC
Confidence 67777766665441 5999999875 455555 899999875 56566665 3 56688999999999988765 3
Q ss_pred --CeeEEEEccc
Q psy18231 525 --NNVKLWTAEE 534 (540)
Q Consensus 525 --~~i~iw~~~~ 534 (540)
..+.+|+..+
T Consensus 448 ~p~~~~l~~~~~ 459 (741)
T 2ecf_A 448 TPPQIELFRANG 459 (741)
T ss_dssp EEEEEEEEETTS
T ss_pred CCCeEEEEEcCC
Confidence 4788888653
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=4.1e-25 Score=208.61 Aligned_cols=273 Identities=12% Similarity=0.201 Sum_probs=198.7
Q ss_pred EEeCCCCCE-EEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeC-CCeEEEEEcCCCce-eEeccc
Q psy18231 170 TRFPVDGSY-CLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS-DKSVILWEVTTGQP-VRRWRE 246 (540)
Q Consensus 170 v~~spdg~~-lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~-dg~i~iwd~~~~~~-~~~~~~ 246 (540)
..|.+++++ +++.+.++.|.+||..+++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 346666555 6677889999999999999988888777777 9999999997766665 88999999999987 777777
Q ss_pred cCCceeEEEECCCCCEEEEecCCC---cEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeE
Q psy18231 247 HASKVTCVKFNEDSSVVISGSQDN---TVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKL 323 (540)
Q Consensus 247 h~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (540)
+..+..+++|+|++++++++..++ .|.+||+.+++. ..
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~--~~------------------------------------- 122 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF--IS------------------------------------- 122 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE--EE-------------------------------------
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe--EE-------------------------------------
Confidence 777666699999999999665553 899999987651 00
Q ss_pred EEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEe-eeCCCe-
Q psy18231 324 VFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILT-ASLDCR- 399 (540)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~-~~~dg~- 399 (540)
.+ .......+++|+| +.+++ ...++.
T Consensus 123 -------------------------------------------------~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~ 152 (331)
T 3u4y_A 123 -------------------------------------------------TI-PIPYDAVGIAISPNGNGLILIDRSSANT 152 (331)
T ss_dssp -------------------------------------------------EE-ECCTTEEEEEECTTSSCEEEEEETTTTE
T ss_pred -------------------------------------------------EE-ECCCCccceEECCCCCEEEEEecCCCce
Confidence 00 1123447889998 44544 455678
Q ss_pred EEEEeCCCCceEE-----eee-CCceEEEEEecCCcEEEe-ecCCCeEEEEeccccch---hhhhccCcCCcceEEEEec
Q psy18231 400 IRRYDIRTGNLVT-----DYV-GEPIVDACFTRDCQCILT-CSTDECLRLFDKATGEL---LEEYKGHKSGDFRIECCLD 469 (540)
Q Consensus 400 i~iwd~~~~~~~~-----~~~-~~~i~~~~~sp~~~~l~~-~~~dg~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~s 469 (540)
|.+|++.....+. .+. +.....++|+|+|+++++ +..++.|++||+.+++. +..+..+ ..+..+ +|+
T Consensus 153 i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~--~~s 229 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTI--VVS 229 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCE--EEC
T ss_pred EEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceE--EEC
Confidence 9999988644331 112 356899999999996554 55689999999999887 6666644 334555 899
Q ss_pred CCCCeEEEee-CCCcEEEEEecCCcc--eeEEEec--ccce---eeeEEEEcCCCcEEEeec--CCeeEEEEcccc
Q psy18231 470 SKDSQIFCGS-SDGKIYKWQLVDSSQ--ISTLIHS--VGKA---VVNSLCSHPTRKHIMSAC--GNNVKLWTAEED 535 (540)
Q Consensus 470 ~~~~~l~s~s-~dg~i~iwd~~~~~~--~~~~~~~--~~~~---~v~~l~~s~d~~~l~s~~--d~~i~iw~~~~~ 535 (540)
|||++|+.++ .++.|.+||+.+++. +..+... .+.. ....++|+|||++|++++ ++.|.+|++.+.
T Consensus 230 pdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 230 RDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp TTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred CCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 9999776554 578899999998877 4444311 1122 235689999999886655 779999999754
No 134
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=1.9e-25 Score=242.47 Aligned_cols=343 Identities=10% Similarity=-0.015 Sum_probs=225.6
Q ss_pred ceeeeecccccc--eeeeeecCeEEEEeCCCCCEEEEeeCC------CcEEEEcCCCCeeEEEeecCCcce-------eE
Q psy18231 147 WSIRVYRPLTVN--RELFVLSGLMHTRFPVDGSYCLTCGSD------KKIKLWNPYRNLLLKTYGGHAHEV-------ND 211 (540)
Q Consensus 147 ~~i~~~~~~~~~--~~~~h~~~v~~v~~spdg~~lat~~~d------g~i~iwd~~~~~~~~~~~~h~~~v-------~~ 211 (540)
..|.+|+..... +...|.+.+.+++|||||++||.++.+ ..|.+||+.+++ ...+..|...+ .+
T Consensus 33 ~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~ 111 (1045)
T 1k32_A 33 DDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDV 111 (1045)
T ss_dssp TEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEE
T ss_pred CcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCccccccccccc
Confidence 478888876543 445688999999999999999987543 489999998876 57788898888 99
Q ss_pred EEEeeCCCeEEEeeCC------CeEEEEEcCCCceeEec-----------------------------------------
Q psy18231 212 ATAACDSSQIASGASD------KSVILWEVTTGQPVRRW----------------------------------------- 244 (540)
Q Consensus 212 l~~sp~~~~l~s~s~d------g~i~iwd~~~~~~~~~~----------------------------------------- 244 (540)
++|+|||+++++++.+ ..|.+|++.+++.....
T Consensus 112 ~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~ 191 (1045)
T 1k32_A 112 AGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEV 191 (1045)
T ss_dssp EEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEE
T ss_pred ccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEEC
Confidence 9999999977777754 35788887666533211
Q ss_pred --------cccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccc
Q psy18231 245 --------REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLS 316 (540)
Q Consensus 245 --------~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (540)
.+|...+.++.|+++ .++++++.|+.+.+|.+........... ...
T Consensus 192 ~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~-------~~~------------------ 245 (1045)
T 1k32_A 192 NSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHT-------SFT------------------ 245 (1045)
T ss_dssp ETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECC-------CCC------------------
T ss_pred CCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEec-------CCC------------------
Confidence 234445555555555 4444555556666665543110000000 000
Q ss_pred cCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEec-C--CeeEe
Q psy18231 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVS-D--HEILT 393 (540)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~--~~l~~ 393 (540)
......+..+.. .+.+..++.+.+++..+. .+..+... ..........|...+.+++|+ | +.+++
T Consensus 246 --~~~~~~~SpDG~-------~la~~~~~~i~~~d~~~~-~l~~l~~~--~~~~~~~~~~~~~~v~~~~~S~pdG~~la~ 313 (1045)
T 1k32_A 246 --DYYPRHLNTDGR-------RILFSKGGSIYIFNPDTE-KIEKIEIG--DLESPEDRIISIPSKFAEDFSPLDGDLIAF 313 (1045)
T ss_dssp --SSCEEEEEESSS-------CEEEEETTEEEEECTTTC-CEEECCCC--CCCBCCSEEEECGGGGEEEEEECGGGCEEE
T ss_pred --CcceeeEcCCCC-------EEEEEeCCEEEEecCCce-EeeeeccC--cccccccccccccccceeeecCCCCCEEEE
Confidence 000000000000 001112333344433111 00000000 000000112345578899999 8 56776
Q ss_pred eeCCCeEEEEeCCCCceEEeee-CC-ceEEEEEecCCcEEEeecCCCeEE-EEeccccchhhhhccCcCCcceEEEEecC
Q psy18231 394 ASLDCRIRRYDIRTGNLVTDYV-GE-PIVDACFTRDCQCILTCSTDECLR-LFDKATGELLEEYKGHKSGDFRIECCLDS 470 (540)
Q Consensus 394 ~~~dg~i~iwd~~~~~~~~~~~-~~-~i~~~~~sp~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~v~~~~~~~s~ 470 (540)
++ ++.|.+|++.+++...... .. .+..++|+ ||+.|+.++.++.+. +||+.+++... +.+|...+..+ +|+|
T Consensus 314 ~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~--~~Sp 388 (1045)
T 1k32_A 314 VS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAM--GVDR 388 (1045)
T ss_dssp EE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEE--EECT
T ss_pred EE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeee--EECC
Confidence 66 8899999999877554222 24 78999999 999999998888899 99988776443 33666666666 8999
Q ss_pred CCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CC----------eeEEEEcccc
Q psy18231 471 KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GN----------NVKLWTAEED 535 (540)
Q Consensus 471 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~----------~i~iw~~~~~ 535 (540)
||++|++++.++.|++||+.+++....+. .|...+.+++|||||++|++++ ++ .|++||+.++
T Consensus 389 DG~~la~~~~~~~v~~~d~~tg~~~~~~~--~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 389 NGKFAVVANDRFEIMTVDLETGKPTVIER--SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred CCCEEEEECCCCeEEEEECCCCceEEecc--CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 99999999999999999999998887776 7888999999999999999887 54 8999999764
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=1.2e-24 Score=207.37 Aligned_cols=267 Identities=11% Similarity=0.116 Sum_probs=209.1
Q ss_pred eeeecCeEEEEeCCCCCEEEEeeC-------CCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEE-EeeCCCeEEE
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTCGS-------DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA-SGASDKSVIL 232 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~~~-------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~-s~s~dg~i~i 232 (540)
......+..++|+|+|++|++++. ++.|.+||..+++.+..+.. ...+..++|+|++++++ +...++.|.+
T Consensus 37 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 37 KAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp EEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred hhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 345677889999999999888774 56899999999998888874 44578899999999655 5555799999
Q ss_pred EEcCCCceeEeccccCCc---------eeEEEECCCCCEEEEec--CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCce
Q psy18231 233 WEVTTGQPVRRWREHASK---------VTCVKFNEDSSVVISGS--QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSI 301 (540)
Q Consensus 233 wd~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (540)
||..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++.. .
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~--~--------------- 178 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLK--T--------------- 178 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE--E---------------
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceE--E---------------
Confidence 999999988877654422 78899999999877765 4788999998876510 0
Q ss_pred eEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccE
Q psy18231 302 TSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSI 381 (540)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 381 (540)
.+..+...+
T Consensus 179 -----------------------------------------------------------------------~~~~~~~~~ 187 (353)
T 3vgz_A 179 -----------------------------------------------------------------------AIQNTGKMS 187 (353)
T ss_dssp -----------------------------------------------------------------------EECCCCTTC
T ss_pred -----------------------------------------------------------------------EecCCCCcc
Confidence 111122335
Q ss_pred EEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC------CceEEEEEecCCcEEEeecC-CCeEEEEeccccchhh
Q psy18231 382 TSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG------EPIVDACFTRDCQCILTCST-DECLRLFDKATGELLE 452 (540)
Q Consensus 382 ~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~i~~~~~sp~~~~l~~~~~-dg~i~i~d~~~~~~~~ 452 (540)
.+++++| +.+++++.++.|.+||+.+++.+..+.. +.+..++|+|+++++++++. ++.|.+||..+++.+.
T Consensus 188 ~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp CCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 5677877 7788888999999999999988877652 35788999999997776665 5999999999998877
Q ss_pred hhccCcCCcceEEEEecCCCCeEEEee-CCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec
Q psy18231 453 EYKGHKSGDFRIECCLDSKDSQIFCGS-SDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 453 ~~~~~~~~v~~~~~~~s~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~ 523 (540)
.+..... ..+ +|+|+|+++++++ .++.|.+||..+++.+..+. . ...+.+++|+|||++|+.+.
T Consensus 268 ~~~~~~~--~~~--~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~--~-~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 268 KVAAPES--LAV--LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD--T-PTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp EEECSSC--CCE--EEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE--C-CSEEEEEEECTTSCEEEEEE
T ss_pred EEEcCCC--ceE--EECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe--c-CCCCCeEEEcCCCCEEEEEE
Confidence 7765442 334 8999999765555 78999999999999888886 3 34689999999999887766
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=1.7e-25 Score=233.66 Aligned_cols=308 Identities=12% Similarity=0.101 Sum_probs=205.5
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC-----Cc
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQ 239 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~-----~~ 239 (540)
..|.+++|||| ++++.+. ++.|++||+.+++... +..+...+.+++|||||++|+++ .|+.|.+||+.+ ++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 56999999999 6666554 6999999998887654 44567789999999999999985 679999999998 87
Q ss_pred eeEeccccCCc--------------eeEEEECCCCCEEEEecCC-CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEE
Q psy18231 240 PVRRWREHASK--------------VTCVKFNEDSSVVISGSQD-NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSV 304 (540)
Q Consensus 240 ~~~~~~~h~~~--------------v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (540)
.......+... +.++.|+|||++|++++.| ..+..+.+......... .
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~-----------------~ 220 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAE-----------------S 220 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCE-----------------E
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCc-----------------e
Confidence 76655444443 4899999999999988733 22222222211100000 0
Q ss_pred EEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEE
Q psy18231 305 HSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSV 384 (540)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 384 (540)
.... + .. .+ .......+.+++..+..... +.....|...+.++
T Consensus 221 ~~~~------------------y--~~-~g-----~~~~~~~l~~~d~~~~~~~~-----------~~~~~~~~~~~~~~ 263 (706)
T 2z3z_A 221 KPLY------------------Y--PM-AG-----TPSHHVTVGIYHLATGKTVY-----------LQTGEPKEKFLTNL 263 (706)
T ss_dssp EEEC------------------C--CB-TT-----SCCCEEEEEEEETTTTEEEE-----------CCCCSCTTCEEEEE
T ss_pred EEee------------------C--CC-CC-----CCCCeeEEEEEECCCCceEe-----------eccCCCCceeEeeE
Confidence 0000 0 00 00 00112334444443322110 00112456778999
Q ss_pred EecC--CeeEeeeCCC-----eEEEEeCCCCceEEeee---C----CceEEEEEec--CCcEEEeecCCCeEEEEecc-c
Q psy18231 385 HVSD--HEILTASLDC-----RIRRYDIRTGNLVTDYV---G----EPIVDACFTR--DCQCILTCSTDECLRLFDKA-T 447 (540)
Q Consensus 385 ~~~~--~~l~~~~~dg-----~i~iwd~~~~~~~~~~~---~----~~i~~~~~sp--~~~~l~~~~~dg~i~i~d~~-~ 447 (540)
+|+| +.+++++.++ .|++||+.+++....+. . ..+..++|+| ||+++++++.|+.++||++. +
T Consensus 264 ~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~ 343 (706)
T 2z3z_A 264 SWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT 343 (706)
T ss_dssp EECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT
T ss_pred EEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECC
Confidence 9999 6688877665 89999999984333332 1 1246789999 99999999999999999876 5
Q ss_pred cchhhhhccCcCCcceEEEEecCCCCeEEEeeC-CC----cEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEee
Q psy18231 448 GELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-DG----KIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522 (540)
Q Consensus 448 ~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~-dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 522 (540)
++.+..+..+...+..+ ++|+|+|+.|+.++. ++ .|+.||+.+++ ...+ .|...+.+++|||||++|+.+
T Consensus 344 ~~~~~~l~~~~~~v~~~-~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l---~~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 344 GRLIRQVTKGEWEVTNF-AGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDL---TPESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp SCEEEECCCSSSCEEEE-EEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEES---CCSSSEEEEEECTTSSEEEEE
T ss_pred CCEEEecCCCCeEEEee-eEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceec---cCCCceEEEEECCCCCEEEEE
Confidence 66667777776655441 389999998766554 44 56677766655 3344 356678999999999988876
Q ss_pred c-C----CeeEEEEcccc
Q psy18231 523 C-G----NNVKLWTAEED 535 (540)
Q Consensus 523 ~-d----~~i~iw~~~~~ 535 (540)
. + +.|.+||++++
T Consensus 419 ~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 419 FQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EECSSCSCEEEEEESSSC
T ss_pred ecCCCCCcEEEEEECCCC
Confidence 4 3 56999998765
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.4e-24 Score=205.89 Aligned_cols=266 Identities=12% Similarity=0.219 Sum_probs=184.3
Q ss_pred CEEE-EeeCCCcEEEEcCC-CC--eeEEEeecCCcceeEEEEeeCCCeEEEeeCC-CeEEEEEcC--CCce--eEecccc
Q psy18231 177 SYCL-TCGSDKKIKLWNPY-RN--LLLKTYGGHAHEVNDATAACDSSQIASGASD-KSVILWEVT--TGQP--VRRWREH 247 (540)
Q Consensus 177 ~~la-t~~~dg~i~iwd~~-~~--~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d-g~i~iwd~~--~~~~--~~~~~~h 247 (540)
++++ +++.++.|++||+. ++ +.+..+ .|...+.+++|+|++++|++++.+ +.|.+|++. +++. +..+..+
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 3444 44779999999985 33 334333 477889999999999999888886 999999997 5543 3344443
Q ss_pred CCceeEEEECCCCCEEEEecC-CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEe
Q psy18231 248 ASKVTCVKFNEDSSVVISGSQ-DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFA 326 (540)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (540)
. .+..++|+|++++|++++. ++.|.+||+..+.....
T Consensus 84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~----------------------------------------- 121 (343)
T 1ri6_A 84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV----------------------------------------- 121 (343)
T ss_dssp S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE-----------------------------------------
T ss_pred C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccc-----------------------------------------
Confidence 3 7899999999998866654 88999999962210000
Q ss_pred eeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeee-CCCeEEEE
Q psy18231 327 FRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTAS-LDCRIRRY 403 (540)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~-~dg~i~iw 403 (540)
.... .....+.+++|+| +.+++++ .++.|.+|
T Consensus 122 --------------------------------------------~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 122 --------------------------------------------VDVV-EGLDGCHSANISPDNRTLWVPALKQDRICLF 156 (343)
T ss_dssp --------------------------------------------EEEE-CCCTTBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred --------------------------------------------cccc-cCCCCceEEEECCCCCEEEEecCCCCEEEEE
Confidence 0001 1123466788888 5677666 89999999
Q ss_pred eCCC-CceEE----eee---CCceEEEEEecCCcEEEee-cCCCeEEEEeccc--cch--hhhhc----cCcCCcceEEE
Q psy18231 404 DIRT-GNLVT----DYV---GEPIVDACFTRDCQCILTC-STDECLRLFDKAT--GEL--LEEYK----GHKSGDFRIEC 466 (540)
Q Consensus 404 d~~~-~~~~~----~~~---~~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~--~~~--~~~~~----~~~~~v~~~~~ 466 (540)
|+.+ ++... .+. +..+..++|+|++++++++ ..++.|.+||+.. ++. ...+. ++........+
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 157 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred EecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 9987 65432 222 3478899999999976554 4789999999953 332 11111 11222223345
Q ss_pred EecCCCCeEE-EeeCCCcEEEEEec--CC--cceeEEEecccceeeeEEEEcCCCcEEEeec--CCeeEEEEcc
Q psy18231 467 CLDSKDSQIF-CGSSDGKIYKWQLV--DS--SQISTLIHSVGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAE 533 (540)
Q Consensus 467 ~~s~~~~~l~-s~s~dg~i~iwd~~--~~--~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~ 533 (540)
+|+|+|++|+ ++..++.|++||+. ++ +.+..+. .+.. +..++|+|+|++|++++ ++.|.+|+++
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~--~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP--TETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE--CSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec--CCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 8999999877 55579999999998 33 3344444 3433 89999999999888776 7999999665
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=4.1e-26 Score=239.16 Aligned_cols=293 Identities=12% Similarity=0.089 Sum_probs=199.8
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCc---ceeEEEEeeCCCeEEEeeCC---------CeEEEE
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAH---EVNDATAACDSSQIASGASD---------KSVILW 233 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~sp~~~~l~s~s~d---------g~i~iw 233 (540)
.+.+++|+|||+++++ +.||+|++||+.+++....+.+|.. .|.+++|||||++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3667899999998776 6799999999999988888877765 49999999999999999774 788899
Q ss_pred EcCCCcee--EeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccc
Q psy18231 234 EVTTGQPV--RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKST 311 (540)
Q Consensus 234 d~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (540)
|+.+++.. .....|...+..++|+|||+.|++++. +.|++||+.+++...+.... .
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~---------------------~ 154 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTG---------------------K 154 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCC---------------------B
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCC---------------------C
Confidence 99988762 222345556899999999999999885 79999999887631111000 0
Q ss_pred ccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--C
Q psy18231 312 KNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--H 389 (540)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~ 389 (540)
.. .... |. ..+ + ....-...+.+++|+| +
T Consensus 155 ~~---------------------------------~~~~---g~-~~~-----------v-~~ee~~~~~~~~~~SpDg~ 185 (723)
T 1xfd_A 155 EG---------------------------------VIYN---GL-SDW-----------L-YEEEILKTHIAHWWSPDGT 185 (723)
T ss_dssp TT---------------------------------TEEE---EE-CCH-----------H-HHHTTSSSSEEEEECTTSS
T ss_pred CC---------------------------------ceEC---cc-cce-----------e-EEEEeccCcceEEECCCCC
Confidence 00 0000 00 000 0 0000012335667776 5
Q ss_pred eeEeeeCC----------------------------------CeEEEEeCCCCceEEeeeC--------CceEEEEEecC
Q psy18231 390 EILTASLD----------------------------------CRIRRYDIRTGNLVTDYVG--------EPIVDACFTRD 427 (540)
Q Consensus 390 ~l~~~~~d----------------------------------g~i~iwd~~~~~~~~~~~~--------~~i~~~~~sp~ 427 (540)
.|++++.| ..|++||+.+++....+.. ..+..++||||
T Consensus 186 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD 265 (723)
T 1xfd_A 186 RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS 265 (723)
T ss_dssp EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS
T ss_pred EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCC
Confidence 56655543 2799999998876455542 36889999999
Q ss_pred CcEEEeecC----CCeEEEEeccccchhhhhccC-cCCcc----eEEEEecCCCCeEEE--eeCCC------cEEEEEe-
Q psy18231 428 CQCILTCST----DECLRLFDKATGELLEEYKGH-KSGDF----RIECCLDSKDSQIFC--GSSDG------KIYKWQL- 489 (540)
Q Consensus 428 ~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~-~~~v~----~~~~~~s~~~~~l~s--~s~dg------~i~iwd~- 489 (540)
|+++++... +..|++||+.+++....+..+ ...+. .+ +|+|||+.|+. +..++ .|++||+
T Consensus 266 g~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~ 343 (723)
T 1xfd_A 266 TKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEP--VFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQ 343 (723)
T ss_dssp SEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCC--EECTTSCSEEEEEEECCSSSSCEEEEEEECSS
T ss_pred CeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCc--eEcCCCCeEEEEEecccCCCcceeEEEEEecc
Confidence 998876643 367999999998876655433 33332 34 89999998775 44666 5677773
Q ss_pred cCCcc--eeEEEecccceeee-EEEEcCCCcEEEeec--C--CeeEEEEccc
Q psy18231 490 VDSSQ--ISTLIHSVGKAVVN-SLCSHPTRKHIMSAC--G--NNVKLWTAEE 534 (540)
Q Consensus 490 ~~~~~--~~~~~~~~~~~~v~-~l~~s~d~~~l~s~~--d--~~i~iw~~~~ 534 (540)
..++. ...+. .+...+. .++|+|||+.|+..+ + +.++||+++.
T Consensus 344 ~~~~~~~~~~l~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 344 PNSSNDNIQSIT--SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp CCSSSCCCCBSC--CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred CCCCccceeEee--cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 33331 44444 2333344 479999999997665 4 7899999864
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.4e-24 Score=235.80 Aligned_cols=360 Identities=9% Similarity=0.009 Sum_probs=240.2
Q ss_pred Ccceeccccchhhhhhcc-----cccceeeeecccccc--eeeeeecCe-------EEEEeCCCCCEEEEeeCC------
Q psy18231 126 HPLLFSLPRTITRILYEL-----PKEWSIRVYRPLTVN--RELFVLSGL-------MHTRFPVDGSYCLTCGSD------ 185 (540)
Q Consensus 126 ~~~~~s~~~~~~~~~~~~-----~~~~~i~~~~~~~~~--~~~~h~~~v-------~~v~~spdg~~lat~~~d------ 185 (540)
....||++. ..+++.. .....|.+|+..... +...|...+ ..++|||||+++++++.+
T Consensus 56 ~~~~~SPDG--~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~ 133 (1045)
T 1k32_A 56 NNARFFPDG--RKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSM 133 (1045)
T ss_dssp EEEEECTTS--SEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTC
T ss_pred cCeEECCCC--CEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCccc
Confidence 345566654 3333322 234578899876643 344577777 999999999977777654
Q ss_pred CcEEEEcCCCCeeE-------------------------------------------------EEeecCCcceeEEEEee
Q psy18231 186 KKIKLWNPYRNLLL-------------------------------------------------KTYGGHAHEVNDATAAC 216 (540)
Q Consensus 186 g~i~iwd~~~~~~~-------------------------------------------------~~~~~h~~~v~~l~~sp 216 (540)
..|.+|++.+++.. ..+.+|...+.++.|++
T Consensus 134 ~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~ 213 (1045)
T 1k32_A 134 TCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVG 213 (1045)
T ss_dssp CEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEET
T ss_pred ceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeC
Confidence 35777776554322 22345777888899988
Q ss_pred CCCeEEEeeCCCeEEEEEcCC-CceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhh
Q psy18231 217 DSSQIASGASDKSVILWEVTT-GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALK 295 (540)
Q Consensus 217 ~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 295 (540)
+ .++++++.|++++||.+.. +.....+..|. .+...+|+|||++|+++. ++.|.+||+...... . +.
T Consensus 214 d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~l~--~---l~---- 281 (1045)
T 1k32_A 214 H-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKIE--K---IE---- 281 (1045)
T ss_dssp T-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCCEE--E---CC----
T ss_pred C-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCceEee--e---ec----
Confidence 7 6677888889999998764 44555565555 467789999999998874 899999998332210 0 00
Q ss_pred hcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeec-cceeEEEeecccceecccccccccccchhhhh
Q psy18231 296 EARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMS-TQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL 374 (540)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (540)
.... ... .. ..........+.++ .++..+++...+...+++... .....+
T Consensus 282 ~~~~------------~~~------~~------~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~-----~~~~~~ 332 (1045)
T 1k32_A 282 IGDL------------ESP------ED------RIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSG-----TYVLKV 332 (1045)
T ss_dssp CCCC------------CBC------CS------EEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTS-----SBEEEC
T ss_pred cCcc------------ccc------cc------ccccccccceeeecCCCCCEEEEEEcCEEEEEcCCC-----CceEEc
Confidence 0000 000 00 00000111222223 222222222222222211111 111123
Q ss_pred hcccc-cEEEEEecC-CeeEeeeCCCeEE-EEeCCCCceEEeee-CCceEEEEEecCCcEEEeecCCCeEEEEeccccch
Q psy18231 375 KEARD-SITSVHVSD-HEILTASLDCRIR-RYDIRTGNLVTDYV-GEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL 450 (540)
Q Consensus 375 ~~~~~-~v~~l~~~~-~~l~~~~~dg~i~-iwd~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 450 (540)
..|.. .+..++|+. +.++.++.++.+. +||+.+++...... ...+..++|+|||++|++++.++.|++||+.+++.
T Consensus 333 ~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~ 412 (1045)
T 1k32_A 333 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP 412 (1045)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce
Confidence 45555 788888884 5678888888898 99998876543332 25789999999999999999999999999999988
Q ss_pred hhhhccCcCCcceEEEEecCCCCeEEEeeCCC----------cEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEE
Q psy18231 451 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG----------KIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 520 (540)
Q Consensus 451 ~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg----------~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~ 520 (540)
...+..|...+..+ +|+|||++|++++.++ .|++||+.+++ +..+. .|...+..++|+|||++|+
T Consensus 413 ~~~~~~~~~~v~~~--~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~--~~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 413 TVIERSREAMITDF--TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAAT--TENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp EEEEECSSSCCCCE--EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECS--CSSSBEEEEEECTTSCEEE
T ss_pred EEeccCCCCCccce--EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEee--CCCcccCCceEcCCCCEEE
Confidence 77777888888877 8999999999887654 89999998877 55555 6788899999999999999
Q ss_pred eec-CCeeEEEEcc
Q psy18231 521 SAC-GNNVKLWTAE 533 (540)
Q Consensus 521 s~~-d~~i~iw~~~ 533 (540)
+++ ++...+|+..
T Consensus 488 ~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 488 YLSYRSLDPSPDRV 501 (1045)
T ss_dssp EEESCCCCCEECSS
T ss_pred EEecccCCcCcchh
Confidence 988 8888888753
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=6.9e-25 Score=203.32 Aligned_cols=250 Identities=10% Similarity=0.024 Sum_probs=189.7
Q ss_pred EeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC-CceeEecccc-CCceeEEEECC
Q psy18231 181 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-GQPVRRWREH-ASKVTCVKFNE 258 (540)
Q Consensus 181 t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h-~~~v~~~~~~~ 258 (540)
.++.|++|++||+.+++... +..|...|.+++|+|++++|++++ ++.|.+||+.+ ++.......| ...+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 45678999999999888664 455899999999999999999987 78999999999 8877766665 47889999999
Q ss_pred CCCEEEEec--CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccce
Q psy18231 259 DSSVVISGS--QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLL 336 (540)
Q Consensus 259 ~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (540)
++++|++++ .++...+|.+........
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~--------------------------------------------------- 123 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPR--------------------------------------------------- 123 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCE---------------------------------------------------
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceE---------------------------------------------------
Confidence 999999998 445667776643221000
Q ss_pred eeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeE-eeeCCCeEEEEeCC--CCceE
Q psy18231 337 SGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEIL-TASLDCRIRRYDIR--TGNLV 411 (540)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~-~~~~dg~i~iwd~~--~~~~~ 411 (540)
.+.. ...+..++|+| +.++ ++..++.+++|+++ +++.
T Consensus 124 ------------------------------------~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~- 165 (297)
T 2ojh_A 124 ------------------------------------LMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE- 165 (297)
T ss_dssp ------------------------------------ECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-
T ss_pred ------------------------------------Eeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-
Confidence 1111 12377788988 5555 77889999999853 4443
Q ss_pred Eeee--CCceEEEEEecCCcEEEeec-CCCeEEEEecc-ccchhhhhccCcCCcceEEEEecCCCCeEEEeeCC------
Q psy18231 412 TDYV--GEPIVDACFTRDCQCILTCS-TDECLRLFDKA-TGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD------ 481 (540)
Q Consensus 412 ~~~~--~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~d------ 481 (540)
..+. ...+.+++|+|++++|+.++ .++.+++|++. .+..+..+..|...+..+ +|+|+|++|++++.+
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~s~dg~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFP--HPSPSGDKVVFVSYDADVFDH 243 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEE--EECTTSSEEEEEEEETTCCSC
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCe--EECCCCCEEEEEEcCCCCCcc
Confidence 3333 25799999999999887766 58999999886 455666677776655555 899999999988876
Q ss_pred -----CcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec
Q psy18231 482 -----GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 482 -----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~ 523 (540)
+.|++||+.+++.........|...+..++|+|++++|++++
T Consensus 244 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp CSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred cccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 569999998887644443336788899999999999999887
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=3.3e-24 Score=203.40 Aligned_cols=284 Identities=8% Similarity=0.044 Sum_probs=196.4
Q ss_pred ccccceeeeecccc-c----ceeeeeecCeEEEEeCCCCCEEEEeeCC-CcEEEEcCC--CCe--eEEEeecCCcceeEE
Q psy18231 143 LPKEWSIRVYRPLT-V----NRELFVLSGLMHTRFPVDGSYCLTCGSD-KKIKLWNPY--RNL--LLKTYGGHAHEVNDA 212 (540)
Q Consensus 143 ~~~~~~i~~~~~~~-~----~~~~~h~~~v~~v~~spdg~~lat~~~d-g~i~iwd~~--~~~--~~~~~~~h~~~v~~l 212 (540)
...++.|++|+... . .....|...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+. .+..+
T Consensus 11 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 89 (343)
T 1ri6_A 11 SPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHI 89 (343)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEE
T ss_pred CCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEE
Confidence 35678899998742 1 1234577889999999999999988876 999999987 444 444555444 88999
Q ss_pred EEeeCCCeEEEeeC-CCeEEEEEcC---CCceeEeccccCCceeEEEECCCCCEEEEec-CCCcEEEEEecC-CCCCCcc
Q psy18231 213 TAACDSSQIASGAS-DKSVILWEVT---TGQPVRRWREHASKVTCVKFNEDSSVVISGS-QDNTVMMWDVKS-RSHHPIQ 286 (540)
Q Consensus 213 ~~sp~~~~l~s~s~-dg~i~iwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~-~~~~~~~ 286 (540)
+|+|++++|++++. ++.|.+||+. ..+.+..+.. ...+.+++|+|+++++++++ .++.|.+||+.+ ++.....
T Consensus 90 ~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 90 STDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred EEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeec
Confidence 99999998876665 8899999994 3444454443 34689999999999888776 889999999976 3310000
Q ss_pred hhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccccc
Q psy18231 287 VRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI 366 (540)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (540)
.
T Consensus 169 ----------------------------------------------------------------~--------------- 169 (343)
T 1ri6_A 169 ----------------------------------------------------------------P--------------- 169 (343)
T ss_dssp ----------------------------------------------------------------E---------------
T ss_pred ----------------------------------------------------------------c---------------
Confidence 0
Q ss_pred ccchhhhhhcccccEEEEEecC--CeeEe-eeCCCeEEEEeCCC--Cce--EEeee---C-----CceEEEEEecCCcEE
Q psy18231 367 HNSCFQALKEARDSITSVHVSD--HEILT-ASLDCRIRRYDIRT--GNL--VTDYV---G-----EPIVDACFTRDCQCI 431 (540)
Q Consensus 367 ~~~~~~~~~~~~~~v~~l~~~~--~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~---~-----~~i~~~~~sp~~~~l 431 (540)
..........+.+++|+| +++++ +..++.|.+||++. ++. ..... . ..+..++|+|+|++|
T Consensus 170 ----~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l 245 (343)
T 1ri6_A 170 ----AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 245 (343)
T ss_dssp ----EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred ----cccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE
Confidence 000001123567889988 54544 45889999999954 432 22222 1 246689999999887
Q ss_pred Ee-ecCCCeEEEEecc----ccchhhhhccCcCCcceEEEEecCCCCeEEEee-CCCcEEEEEec--CCcc--eeEEEec
Q psy18231 432 LT-CSTDECLRLFDKA----TGELLEEYKGHKSGDFRIECCLDSKDSQIFCGS-SDGKIYKWQLV--DSSQ--ISTLIHS 501 (540)
Q Consensus 432 ~~-~~~dg~i~i~d~~----~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s-~dg~i~iwd~~--~~~~--~~~~~~~ 501 (540)
++ ...++.|.+||+. +.+.+..+..+.. +..+ +|+|+|++|++++ .++.|.+|++. +++. +..+.
T Consensus 246 ~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~--~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~-- 320 (343)
T 1ri6_A 246 YACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGF--NVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYA-- 320 (343)
T ss_dssp EEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCE--EECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEE--
T ss_pred EEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceE--EECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccc--
Confidence 74 5578999999998 2344444544444 5556 8999999888877 68999999664 5533 33333
Q ss_pred ccceeeeEEEEcCCCc
Q psy18231 502 VGKAVVNSLCSHPTRK 517 (540)
Q Consensus 502 ~~~~~v~~l~~s~d~~ 517 (540)
. .....+++|.|+.+
T Consensus 321 ~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 321 V-GQGPMWVVVNAHEG 335 (343)
T ss_dssp C-SSSCCEEEEEEEC-
T ss_pred c-CCCCeeEEEEcccC
Confidence 2 34577888877654
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=8.1e-25 Score=207.04 Aligned_cols=261 Identities=15% Similarity=0.128 Sum_probs=197.1
Q ss_pred CEEEEeeCCCcEEEEcCCCCeeEEEeecCCc--ceeEEEEeeCCCeE-EEeeCCCeEEEEEcCCCceeEeccc-c----C
Q psy18231 177 SYCLTCGSDKKIKLWNPYRNLLLKTYGGHAH--EVNDATAACDSSQI-ASGASDKSVILWEVTTGQPVRRWRE-H----A 248 (540)
Q Consensus 177 ~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~-h----~ 248 (540)
++|++++.++.|.+||+.+++.+..+..... .+..++|+|+++++ ++++.++.|.+||+.+++.+..+.. + .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999999999888863322 58899999999876 5556678999999999988776642 2 2
Q ss_pred CceeEEEECCCCCEEEEec------------CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccc
Q psy18231 249 SKVTCVKFNEDSSVVISGS------------QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLS 316 (540)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (540)
..+..++|+|+++++++++ .++.|.+||+.+++.. .
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~--~------------------------------ 129 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR--K------------------------------ 129 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE--E------------------------------
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE--E------------------------------
Confidence 3678899999999998886 5799999998765410 0
Q ss_pred cCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEee
Q psy18231 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTA 394 (540)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~ 394 (540)
.+ .....+.+++|+| +.++++
T Consensus 130 --------------------------------------------------------~~-~~~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 130 --------------------------------------------------------AF-EAPRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp --------------------------------------------------------EE-ECCSSCCCEEECTTSSCEEEE
T ss_pred --------------------------------------------------------EE-eCCCCcceeEECCCCCEEEEe
Confidence 00 0122355677887 556666
Q ss_pred eCCCeEEEEeCCCCceEEeeeCCc-eEEEEEecCCcEEEeecCCC------------------------eEEEEeccccc
Q psy18231 395 SLDCRIRRYDIRTGNLVTDYVGEP-IVDACFTRDCQCILTCSTDE------------------------CLRLFDKATGE 449 (540)
Q Consensus 395 ~~dg~i~iwd~~~~~~~~~~~~~~-i~~~~~sp~~~~l~~~~~dg------------------------~i~i~d~~~~~ 449 (540)
++.|.+||+.+++....+..+. ...+.|+|+++.++..+.++ .|.+||+.+++
T Consensus 153 --~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 230 (337)
T 1pby_B 153 --GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE 230 (337)
T ss_dssp --SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC
T ss_pred --CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC
Confidence 6889999999998877765421 22347899998776655332 46899998887
Q ss_pred hh-hhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCee
Q psy18231 450 LL-EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNV 527 (540)
Q Consensus 450 ~~-~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i 527 (540)
.. ..+..+...+..+ +|+|+|++++++ ++.|++||+.+++.+..+. ....+.+++|+|||++|++++ ++.|
T Consensus 231 ~~~~~~~~~~~~~~~~--~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~i 303 (337)
T 1pby_B 231 MAMREVRIMDVFYFST--AVNPAKTRAFGA--YNVLESFDLEKNASIKRVP---LPHSYYSVNVSTDGSTVWLGGALGDL 303 (337)
T ss_dssp EEEEEEEECSSCEEEE--EECTTSSEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECTTSCEEEEESBSSEE
T ss_pred ceEeecCCCCCceeeE--EECCCCCEEEEe--CCeEEEEECCCCcCcceec---CCCceeeEEECCCCCEEEEEcCCCcE
Confidence 64 1223333334444 899999999988 7999999999998888776 234678999999999999988 9999
Q ss_pred EEEEcccc
Q psy18231 528 KLWTAEED 535 (540)
Q Consensus 528 ~iw~~~~~ 535 (540)
.+||++++
T Consensus 304 ~v~d~~~~ 311 (337)
T 1pby_B 304 AAYDAETL 311 (337)
T ss_dssp EEEETTTC
T ss_pred EEEECcCC
Confidence 99999765
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=1e-24 Score=228.60 Aligned_cols=342 Identities=11% Similarity=0.050 Sum_probs=219.3
Q ss_pred Ccceeccccchhhhhhcccccceeeeeccccccee--ee-eec---CeEEEEeCCCCCEEEEeeCC---------CcEEE
Q psy18231 126 HPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRE--LF-VLS---GLMHTRFPVDGSYCLTCGSD---------KKIKL 190 (540)
Q Consensus 126 ~~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~-h~~---~v~~v~~spdg~~lat~~~d---------g~i~i 190 (540)
..+.|+++.. +++. +.+++|++|+..+.... .. |.. .|.+++|||||++|++++.+ +.+.+
T Consensus 20 ~~~~~spdg~---~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 20 PEAKWISDTE---FIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCBSSSSC---BCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccEEcCCCc---EEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 3456666643 4444 67789999998876532 22 222 39999999999999998764 78889
Q ss_pred EcCCCCeeEEEee---cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCce----------------
Q psy18231 191 WNPYRNLLLKTYG---GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV---------------- 251 (540)
Q Consensus 191 wd~~~~~~~~~~~---~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v---------------- 251 (540)
||+.+++. ..+. +|...+..++|||||++||.++. +.|.+||+.+++.......+...+
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 99998876 3343 34556899999999999999886 799999999988776655544333
Q ss_pred --eEEEECCCCCEEEEecCC-CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeee
Q psy18231 252 --TCVKFNEDSSVVISGSQD-NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFR 328 (540)
Q Consensus 252 --~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (540)
.+++|+|||++|++++.| +.+.+|++....... ... +..+.+...+.
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~-------------~~~---~~~~~~~~~G~-------------- 223 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSI-------------YPT---VKPYHYPKAGS-------------- 223 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSS-------------SCC---CEEEECCBTTS--------------
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcC-------------CCc---ceeccCCCCCC--------------
Confidence 789999999999988765 467888875432100 000 00111110000
Q ss_pred ecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeC----CCeEEE
Q psy18231 329 CKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASL----DCRIRR 402 (540)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~----dg~i~i 402 (540)
......+.+++..+......+.. ......+...+..++|+| +++++.+. +..|++
T Consensus 224 ------------~~~~~~l~~~d~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 284 (723)
T 1xfd_A 224 ------------ENPSISLHVIGLNGPTHDLEMMP-------PDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTL 284 (723)
T ss_dssp ------------CCCEEEEEEEESSSSCCCEECCC-------CCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEE
T ss_pred ------------CCCeeEEEEEECCCCceeEEeeC-------CccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEE
Confidence 01123445555443321111100 001223467889999999 45545432 367999
Q ss_pred EeCCCCceEEeeeC---Cce----EEEEEecCCcEEEe--ecCCC------eEEEEe-ccccch--hhhhccCcCCcceE
Q psy18231 403 YDIRTGNLVTDYVG---EPI----VDACFTRDCQCILT--CSTDE------CLRLFD-KATGEL--LEEYKGHKSGDFRI 464 (540)
Q Consensus 403 wd~~~~~~~~~~~~---~~i----~~~~~sp~~~~l~~--~~~dg------~i~i~d-~~~~~~--~~~~~~~~~~v~~~ 464 (540)
||+.+++....+.. ..+ ..++|+|||+.|+. +..++ .|++|| ...++. ...+..+...+...
T Consensus 285 ~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~ 364 (723)
T 1xfd_A 285 CDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKI 364 (723)
T ss_dssp EETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEE
T ss_pred EeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEee
Confidence 99999887655432 223 37899999997775 44566 577788 344441 45554333333221
Q ss_pred EEEecCCCCeEEEeeCC---CcEEEEEecCCc--ceeEEEec-ccceeeeEEEEcCCCcEEEeec
Q psy18231 465 ECCLDSKDSQIFCGSSD---GKIYKWQLVDSS--QISTLIHS-VGKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 465 ~~~~s~~~~~l~s~s~d---g~i~iwd~~~~~--~~~~~~~~-~~~~~v~~l~~s~d~~~l~s~~ 523 (540)
.+|+|||++|+..+.+ +.+++|++.... ....+... .|...+..++|+|||++|+...
T Consensus 365 -~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 365 -LAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp -EEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred -eEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 3799999998766555 789999986532 33333310 1567789999999999888754
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=3.7e-23 Score=196.64 Aligned_cols=263 Identities=9% Similarity=0.018 Sum_probs=191.5
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCC-cceeEEEEeeCCCeEE-EeeCCCeEEEEEcCCCceeEeccc
Q psy18231 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA-HEVNDATAACDSSQIA-SGASDKSVILWEVTTGQPVRRWRE 246 (540)
Q Consensus 169 ~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~ 246 (540)
.++++++++++++++.+++|.+||+.+++.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45788999999999999999999999999988887543 2578999999998654 556789999999999988776653
Q ss_pred cC------CceeEEEECCCCCEEEEecCC------------CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEee
Q psy18231 247 HA------SKVTCVKFNEDSSVVISGSQD------------NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLV 308 (540)
Q Consensus 247 h~------~~v~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (540)
+. ..+..++|+|+|++|++++.+ +.|.+||+.+++.....
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~---------------------- 141 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV---------------------- 141 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS----------------------
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccccee----------------------
Confidence 22 337899999999999998865 89999999875410000
Q ss_pred cccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC
Q psy18231 309 KSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD 388 (540)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 388 (540)
....+...+.+++|+|
T Consensus 142 ----------------------------------------------------------------~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 142 ----------------------------------------------------------------RTFPMPRQVYLMRAAD 157 (349)
T ss_dssp ----------------------------------------------------------------EEEECCSSCCCEEECT
T ss_pred ----------------------------------------------------------------eeccCCCcccceeECC
Confidence 0011223466788888
Q ss_pred -CeeEeeeCCCeEEEEeCCCCceEEeeeCC--------------------------ceEEEEEecCCc-----------E
Q psy18231 389 -HEILTASLDCRIRRYDIRTGNLVTDYVGE--------------------------PIVDACFTRDCQ-----------C 430 (540)
Q Consensus 389 -~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------------------~i~~~~~sp~~~-----------~ 430 (540)
..+++++. .|.+||+.+++.+..+..+ ....+++++++. +
T Consensus 158 dg~l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 158 DGSLYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp TSCEEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred CCcEEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 33665543 4999999999887766532 345567766542 2
Q ss_pred EEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecC-CCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeE
Q psy18231 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDS-KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNS 509 (540)
Q Consensus 431 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 509 (540)
+.....++.+++|+... +......+ +++| ++++++++ ++.|++||+.+++.+..+. ....+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~---------~~~~~~~~--~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~ 299 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFAD---------LTELYFTG--LRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN---LDHTYYC 299 (349)
T ss_dssp EEEETTTCCEEEEEEEE---------CSSCEEEE--EECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCE
T ss_pred EEEeccCCcEEeccccc---------CCCcceee--EecCCCCCEEEEE--cCeEEEEECccCeEEEEEc---CCCCccc
Confidence 22333445566665532 22333344 8999 99999888 8899999999998888876 2345789
Q ss_pred EEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 510 LCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 510 l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
++|+|++++|++++ ++.|++||++++
T Consensus 300 ~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 300 VAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred eEECCCCCEEEEecCCCeEEEEecccc
Confidence 99999999888888 999999999764
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=4e-23 Score=194.95 Aligned_cols=271 Identities=7% Similarity=0.029 Sum_probs=193.1
Q ss_pred hhhhhcccccceeeeecccccceee---eeecCeEEEEeCCCCCEEEEeeC-CCcEEEEcCCCCee-EEEeecCCcceeE
Q psy18231 137 TRILYELPKEWSIRVYRPLTVNREL---FVLSGLMHTRFPVDGSYCLTCGS-DKKIKLWNPYRNLL-LKTYGGHAHEVND 211 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~~~~---~h~~~v~~v~~spdg~~lat~~~-dg~i~iwd~~~~~~-~~~~~~h~~~v~~ 211 (540)
..++.....++.|++|+..+..... .+...+ +++|+|||++|++++. ++.|.+||+.+++. ...+..+..+..+
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD 88 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc
Confidence 3444556677899999987654322 234456 9999999997776665 88999999999987 7777777777666
Q ss_pred EEEeeCCCeEEEeeCCC---eEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEe-cCCCc-EEEEEecCCCCCCcc
Q psy18231 212 ATAACDSSQIASGASDK---SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG-SQDNT-VMMWDVKSRSHHPIQ 286 (540)
Q Consensus 212 l~~sp~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~-i~iwd~~~~~~~~~~ 286 (540)
++|+|++++|+++..++ .|.+||+.+++.+..+.. .....+++|+|+|++++++ ..++. |.+|++..... ..
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~--~~ 165 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV--LF 165 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC--EE
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCc--Ee
Confidence 99999999999665553 899999999988887754 4456999999999865554 55578 99999975431 00
Q ss_pred hhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccccc
Q psy18231 287 VRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI 366 (540)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (540)
.. .
T Consensus 166 ----------------~~------------------------------------------------~------------- 168 (331)
T 3u4y_A 166 ----------------DT------------------------------------------------G------------- 168 (331)
T ss_dssp ----------------EE------------------------------------------------E-------------
T ss_pred ----------------ec------------------------------------------------C-------------
Confidence 00 0
Q ss_pred ccchhhhhhcccccEEEEEecC--Cee-EeeeCCCeEEEEeCCCCce---EEeeeC-CceEEEEEecCCcEEEeec-CCC
Q psy18231 367 HNSCFQALKEARDSITSVHVSD--HEI-LTASLDCRIRRYDIRTGNL---VTDYVG-EPIVDACFTRDCQCILTCS-TDE 438 (540)
Q Consensus 367 ~~~~~~~~~~~~~~v~~l~~~~--~~l-~~~~~dg~i~iwd~~~~~~---~~~~~~-~~i~~~~~sp~~~~l~~~~-~dg 438 (540)
.........+..++|+| +++ +++..++.|.+||+.+++. +..+.. ..+..++|+|+|+++++++ .++
T Consensus 169 -----~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 243 (331)
T 3u4y_A 169 -----QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTV 243 (331)
T ss_dssp -----EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEE
T ss_pred -----CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCC
Confidence 00001223467889998 444 4555789999999999887 666654 5678999999999776554 578
Q ss_pred eEEEEeccccch--hhhhccC----cCCcce-EEEEecCCCCeEEEee-CCCcEEEEEecCCc
Q psy18231 439 CLRLFDKATGEL--LEEYKGH----KSGDFR-IECCLDSKDSQIFCGS-SDGKIYKWQLVDSS 493 (540)
Q Consensus 439 ~i~i~d~~~~~~--~~~~~~~----~~~v~~-~~~~~s~~~~~l~s~s-~dg~i~iwd~~~~~ 493 (540)
.|.+||..+++. +..+..+ ...... -.++|+|||++|++++ .++.|.+||+.+..
T Consensus 244 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 244 DVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 899999998876 3222221 222221 1138999999876555 56699999987543
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.1e-23 Score=195.09 Aligned_cols=248 Identities=14% Similarity=0.037 Sum_probs=187.8
Q ss_pred ccccceeeeecccccc--eeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCC-CeeEEEeecC-CcceeEEEEeeCC
Q psy18231 143 LPKEWSIRVYRPLTVN--RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYR-NLLLKTYGGH-AHEVNDATAACDS 218 (540)
Q Consensus 143 ~~~~~~i~~~~~~~~~--~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~-~~~~~~~~~h-~~~v~~l~~sp~~ 218 (540)
.+.+..|++|+..+.. ....|.+.|.+++|+|||++|++++ ++.|.+||+.+ ++.......| ...+.+++|+|++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 3567889999987654 3466889999999999999999987 88999999998 8777666665 4788999999999
Q ss_pred CeEEEee--CCCeEEEEEc--CCCceeEeccccCCceeEEEECCCCCEEE-EecCCCcEEEEEecCCCCCCcchhhhhHh
Q psy18231 219 SQIASGA--SDKSVILWEV--TTGQPVRRWREHASKVTCVKFNEDSSVVI-SGSQDNTVMMWDVKSRSHHPIQVRCLNEA 293 (540)
Q Consensus 219 ~~l~s~s--~dg~i~iwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 293 (540)
++|++++ .++...||.+ .+++ ...+..+. .+..++|+|++++|+ +++.++.+++|+++.....
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~---------- 164 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV---------- 164 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC----------
T ss_pred CEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCc----------
Confidence 9999998 3345555554 4444 34444333 489999999999877 7788999999997543210
Q ss_pred hhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhh
Q psy18231 294 LKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQA 373 (540)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (540)
...
T Consensus 165 -----------------------------------------------------------------------------~~~ 167 (297)
T 2ojh_A 165 -----------------------------------------------------------------------------ETR 167 (297)
T ss_dssp -----------------------------------------------------------------------------EEE
T ss_pred -----------------------------------------------------------------------------ceE
Confidence 002
Q ss_pred hhcccccEEEEEecC--CeeEeee-CCCeEEEEeCC-CCceEEeeeC--CceEEEEEecCCcEEEeecCC----------
Q psy18231 374 LKEARDSITSVHVSD--HEILTAS-LDCRIRRYDIR-TGNLVTDYVG--EPIVDACFTRDCQCILTCSTD---------- 437 (540)
Q Consensus 374 ~~~~~~~v~~l~~~~--~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~d---------- 437 (540)
+..+...+.+++|+| +.+++++ .++.+++|+++ .+.....+.. ..+..++|+|+|++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence 334566788999998 5566555 58999999886 4445555543 468889999999999888765
Q ss_pred -CeEEEEeccccch--hhhhccCcCCcceEEEEecCCCCeEEEeeCCC
Q psy18231 438 -ECLRLFDKATGEL--LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG 482 (540)
Q Consensus 438 -g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg 482 (540)
+.|++||+.+++. +..+.+|...+..+ +|+|++++|++++.+.
T Consensus 248 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~--~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 248 DVRVQLMDMDGGNVETLFDLFGGQGTMNSP--NWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEETTSCSCEEEEEEEESTTTSCSC--CBCTTSSEEEEEEECC
T ss_pred ceEEEEEecCCCCceeeeccCCCCcccccc--eECCCCCEEEEEEecc
Confidence 5699999988765 33444777778777 8999999998887654
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=3e-22 Score=190.27 Aligned_cols=269 Identities=10% Similarity=0.108 Sum_probs=179.4
Q ss_pred CCcEEEEcC--CCCeeEE-EeecCCcceeEEEEeeCCCeEEEeeC---CCeEEEEEcCCCc--eeEeccccCCceeEEEE
Q psy18231 185 DKKIKLWNP--YRNLLLK-TYGGHAHEVNDATAACDSSQIASGAS---DKSVILWEVTTGQ--PVRRWREHASKVTCVKF 256 (540)
Q Consensus 185 dg~i~iwd~--~~~~~~~-~~~~h~~~v~~l~~sp~~~~l~s~s~---dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~ 256 (540)
++.|.+|++ .+++... ....+...+..++|+|||+ |++++. ++.|.+||+.+++ .+..+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 456777755 4565433 2334567788899999999 555544 6899999997765 34444567888999999
Q ss_pred CCCCCEEEEec-CCCcEEEEEecCCCC-CCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeeccccc
Q psy18231 257 NEDSSVVISGS-QDNTVMMWDVKSRSH-HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNG 334 (540)
Q Consensus 257 ~~~~~~l~s~~-~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (540)
+|++++|++++ .++.|.+|++..... ..+.
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~------------------------------------------------ 125 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTD------------------------------------------------ 125 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEE------------------------------------------------
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecc------------------------------------------------
Confidence 99999888887 679999999964221 0000
Q ss_pred ceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCC-CCceE
Q psy18231 335 LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIR-TGNLV 411 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~-~~~~~ 411 (540)
.....+. . . ....+...+.+++|+| +++++...++.|.+||+. +++..
T Consensus 126 --------------~~~~~~~------------~-p--~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 126 --------------TVQHSGH------------G-P--RPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLS 176 (347)
T ss_dssp --------------EEECCCC------------C-S--STTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEE
T ss_pred --------------eeecCCC------------C-C--CccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEE
Confidence 0000000 0 0 0111234578899998 645555668899999998 55433
Q ss_pred E--eee---CCceEEEEEecCCcEEEe-ecCCCeEEEEeccc--cch--hhhhccCcCC----cceEEEEecCCCCeE-E
Q psy18231 412 T--DYV---GEPIVDACFTRDCQCILT-CSTDECLRLFDKAT--GEL--LEEYKGHKSG----DFRIECCLDSKDSQI-F 476 (540)
Q Consensus 412 ~--~~~---~~~i~~~~~sp~~~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~~~~----v~~~~~~~s~~~~~l-~ 476 (540)
. .+. +.....++|+|||+++++ ...++.|.+|++.. ++. +..+...... .....++|+|||++| +
T Consensus 177 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v 256 (347)
T 3hfq_A 177 EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYV 256 (347)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEE
T ss_pred EeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEE
Confidence 2 111 246788999999996655 56789999999874 432 2222222111 122334899999987 4
Q ss_pred EeeCCCcEEEEEecCC---cceeEEEecccceeeeEEEEcCCCcEEEeec--CCeeEEEEcc
Q psy18231 477 CGSSDGKIYKWQLVDS---SQISTLIHSVGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAE 533 (540)
Q Consensus 477 s~s~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~ 533 (540)
+...++.|.+|++... +.+..+. .+...+..++|+|||++|++++ ++.|.+|+++
T Consensus 257 ~~~~~~~v~v~~~~~~g~~~~~~~~~--~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 257 SNRGYNTLAVFAVTADGHLTLIQQIS--TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEETTTEEEEEEECGGGCEEEEEEEE--CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EeCCCCEEEEEEECCCCcEEEeEEEe--cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 5567899999999732 3344444 5566789999999999888876 5899999664
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=2.1e-23 Score=212.55 Aligned_cols=263 Identities=10% Similarity=0.048 Sum_probs=191.9
Q ss_pred ecCeEEEEeCCCCCEEEEeeC-CCcEEEEcCCCCeeEEEeecCC-cceeEEEEeeCCCeEEEeeC---CCeEEEEEcCC-
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHA-HEVNDATAACDSSQIASGAS---DKSVILWEVTT- 237 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~-dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~sp~~~~l~s~s~---dg~i~iwd~~~- 237 (540)
..+|.+++|+|||++||+++. ||+++||++.+++.. .+..|. ..+.+++|+|| +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 457999999999999998876 999999998666654 455455 68999999999 77777765 45566765543
Q ss_pred --CceeEeccccCCceeEEEECCCCC--EEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccc
Q psy18231 238 --GQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKN 313 (540)
Q Consensus 238 --~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
+... .+..+. .+...+|+|+++ .+++++. +.+.+||+.+++...
T Consensus 99 ~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~----------------------------- 146 (582)
T 3o4h_A 99 RPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRE----------------------------- 146 (582)
T ss_dssp STTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEE-----------------------------
T ss_pred CCCccc-cccCCC-CceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEE-----------------------------
Confidence 3333 333222 344567788775 4444444 455699998765211
Q ss_pred ccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Cee
Q psy18231 314 HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI 391 (540)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l 391 (540)
+..+.. .+++|+| +.+
T Consensus 147 ------------------------------------------------------------l~~~~~--~~~~~spDG~~l 164 (582)
T 3o4h_A 147 ------------------------------------------------------------LARLPG--FGFVSDIRGDLI 164 (582)
T ss_dssp ------------------------------------------------------------EEEESS--CEEEEEEETTEE
T ss_pred ------------------------------------------------------------eecCCC--ceEEECCCCCEE
Confidence 011111 5677777 778
Q ss_pred EeeeCC----CeEEEEeCCCCceEEeee-CCceEEEEEecCCcEEEeecCCC--eEEEEeccccchhhhhccCcCCcceE
Q psy18231 392 LTASLD----CRIRRYDIRTGNLVTDYV-GEPIVDACFTRDCQCILTCSTDE--CLRLFDKATGELLEEYKGHKSGDFRI 464 (540)
Q Consensus 392 ~~~~~d----g~i~iwd~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~ 464 (540)
++++.+ +.|++||+.+++...... ...+..++|||||++|+++..++ .|++||+.+++.. .+..|...+..+
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~ 243 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSY 243 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHH
T ss_pred EEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhh
Confidence 877766 789999999887653322 25689999999999999888888 8999999988877 677776666555
Q ss_pred EEE--------ecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CC---eeEEEEc
Q psy18231 465 ECC--------LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GN---NVKLWTA 532 (540)
Q Consensus 465 ~~~--------~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~---~i~iw~~ 532 (540)
+ |+|||.++++++.|+++++|++ ++... .+.+.+.+++|+ +++++++++ +. .+.+|+.
T Consensus 244 --~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~-----~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 244 --RPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE-----APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp --CCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC-----CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred --hhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec-----cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 5 9999988999999999999998 65443 234678999999 999998877 64 4666665
Q ss_pred c
Q psy18231 533 E 533 (540)
Q Consensus 533 ~ 533 (540)
.
T Consensus 314 ~ 314 (582)
T 3o4h_A 314 G 314 (582)
T ss_dssp C
T ss_pred C
Confidence 4
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=1.1e-22 Score=192.19 Aligned_cols=284 Identities=10% Similarity=0.082 Sum_probs=192.0
Q ss_pred hhcccccceeeeeccccccee--eeeec---CeEEEEeCCCCCEEE-EeeCCCcEEEEcCCCCeeEEEeec-C----Ccc
Q psy18231 140 LYELPKEWSIRVYRPLTVNRE--LFVLS---GLMHTRFPVDGSYCL-TCGSDKKIKLWNPYRNLLLKTYGG-H----AHE 208 (540)
Q Consensus 140 ~~~~~~~~~i~~~~~~~~~~~--~~h~~---~v~~v~~spdg~~la-t~~~dg~i~iwd~~~~~~~~~~~~-h----~~~ 208 (540)
++....++.|++|+..+.... ..+.. .+..++|+|||++++ +++.++.|.+||+.+++.+..+.. + ...
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 445567788999998765432 23334 589999999998765 555678999999999998877753 2 236
Q ss_pred eeEEEEeeCCCeEEEee------------CCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEE
Q psy18231 209 VNDATAACDSSQIASGA------------SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276 (540)
Q Consensus 209 v~~l~~sp~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 276 (540)
+.+++|+|++++|++++ .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|.+||
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d 160 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMD 160 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEE
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEE
Confidence 78899999999998886 579999999999888777654 4567889999999988887 68899999
Q ss_pred ecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccce
Q psy18231 277 VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
+.+++..... ... . ... ....+.++......
T Consensus 161 ~~~~~~~~~~--~~~-------------------~--------------------~~~---~~~~s~dg~~l~~~----- 191 (337)
T 1pby_B 161 PEAGTLVEDK--PIQ-------------------S--------------------WEA---ETYAQPDVLAVWNQ----- 191 (337)
T ss_dssp TTTTEEEEEE--CST-------------------T--------------------TTT---TTBCCCBCCCCCCC-----
T ss_pred CCCCcEeeee--ecc-------------------c--------------------cCC---CceeCCCccEEeee-----
Confidence 9876521000 000 0 000 00000000000000
Q ss_pred ecccccccccccchhhhhhcccccE---EEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeee----CCceEEEEEecC
Q psy18231 357 QIGDVTPISIHNSCFQALKEARDSI---TSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYV----GEPIVDACFTRD 427 (540)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~v---~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~i~~~~~sp~ 427 (540)
......+ ....... .... ......|.+||+.+++.. .+. ...+.+++|+|+
T Consensus 192 ------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~d 251 (337)
T 1pby_B 192 ------------------HESSGVMATPFYTARKDIDPADP-TAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPA 251 (337)
T ss_dssp ------------------CTTTTEEEEEEEEEBTTSCTTSG-GGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTT
T ss_pred ------------------ccCCCceeeeeeccccccccccc-cccccceEEEeCCCCCce-EeecCCCCCceeeEEECCC
Confidence 0000000 0000000 0000 001116899999998775 222 246788999999
Q ss_pred CcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe
Q psy18231 428 CQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 500 (540)
Q Consensus 428 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 500 (540)
|++++++ ++.|++||+.+++.+..+..+. .+..+ +|+|+|++|++++.++.|++||+.+++.+..+..
T Consensus 252 g~~l~~~--~~~v~~~d~~~~~~~~~~~~~~-~~~~~--~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 252 KTRAFGA--YNVLESFDLEKNASIKRVPLPH-SYYSV--NVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp SSEEEEE--ESEEEEEETTTTEEEEEEECSS-CCCEE--EECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEe--CCeEEEEECCCCcCcceecCCC-ceeeE--EECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 9999988 7999999999988877766443 34555 8999999999999999999999999999988873
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=5.2e-23 Score=214.92 Aligned_cols=282 Identities=9% Similarity=0.071 Sum_probs=191.7
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeE-EEeecCC-----------------cceeEEEEeeCCCeEEEeeCCC
Q psy18231 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLL-KTYGGHA-----------------HEVNDATAACDSSQIASGASDK 228 (540)
Q Consensus 167 v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~-~~~~~h~-----------------~~v~~l~~sp~~~~l~s~s~dg 228 (540)
+..+.|+ |+.+++++.++ | +||+.+++.+ ..+..|. ..|.+++|+|| +.++.+. ++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CC
Confidence 4456677 55667777777 8 9999999873 4443333 46999999999 6665553 59
Q ss_pred eEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecC-----CCCCCcchhhhhHhhhhcCCceeE
Q psy18231 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-----RSHHPIQVRCLNEALKEARDSITS 303 (540)
Q Consensus 229 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 303 (540)
.|++||+.+++... +..+...+.+++|+|||++|+++ .|+.|++||+.+ ++...+....
T Consensus 102 ~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~-------------- 165 (706)
T 2z3z_A 102 GLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDG-------------- 165 (706)
T ss_dssp EEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCC--------------
T ss_pred EEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCC--------------
Confidence 99999998886654 44567789999999999999985 689999999987 5421110000
Q ss_pred EEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEE
Q psy18231 304 VHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITS 383 (540)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 383 (540)
... ... +.. ....+...+.+
T Consensus 166 --------~~~---------------------------------~~~-----------------g~~--~~~ee~~~~~~ 185 (706)
T 2z3z_A 166 --------TET---------------------------------LVY-----------------GQA--VHQREFGIEKG 185 (706)
T ss_dssp --------BTT---------------------------------EEE-----------------SSC--CGGGCTTCCCS
T ss_pred --------CCC---------------------------------eEc-----------------ccc--hhhhhcCCCce
Confidence 000 000 000 11122344567
Q ss_pred EEecC--CeeEeee---------------------------------CCCeEEEEeCCCCceEEeee----CCceEEEEE
Q psy18231 384 VHVSD--HEILTAS---------------------------------LDCRIRRYDIRTGNLVTDYV----GEPIVDACF 424 (540)
Q Consensus 384 l~~~~--~~l~~~~---------------------------------~dg~i~iwd~~~~~~~~~~~----~~~i~~~~~ 424 (540)
+.|+| +.|++++ .+..|++||+.+++...... ...+..++|
T Consensus 186 ~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 265 (706)
T 2z3z_A 186 TFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSW 265 (706)
T ss_dssp EEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEE
Confidence 78887 6677766 44689999999887654442 246899999
Q ss_pred ecCCcEEEeecCCC-----eEEEEeccccchhhhhc-c-CcC---CcceEEEEecC--CCCeEEEeeCCCcEEEEEec-C
Q psy18231 425 TRDCQCILTCSTDE-----CLRLFDKATGELLEEYK-G-HKS---GDFRIECCLDS--KDSQIFCGSSDGKIYKWQLV-D 491 (540)
Q Consensus 425 sp~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~-~-~~~---~v~~~~~~~s~--~~~~l~s~s~dg~i~iwd~~-~ 491 (540)
+|||++|++++.++ .|++||+.+++....+. . +.. .+..+ +|+| ||+++++++.|+.+++|++. +
T Consensus 266 spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~--~~sp~~dg~~l~~~~~~g~~~l~~~~~~ 343 (706)
T 2z3z_A 266 SPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPL--TFLPGSNNQFIWQSRRDGWNHLYLYDTT 343 (706)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCC--EECTTCSSEEEEEECTTSSCEEEEEETT
T ss_pred ECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCc--eeecCCCCEEEEEEccCCccEEEEEECC
Confidence 99999999887765 89999999884333332 1 221 12344 7999 99999999999999999987 6
Q ss_pred CcceeEEEecccceeeeE-EEEcCCCcEEEeec--CC----eeEEEEccc
Q psy18231 492 SSQISTLIHSVGKAVVNS-LCSHPTRKHIMSAC--GN----NVKLWTAEE 534 (540)
Q Consensus 492 ~~~~~~~~~~~~~~~v~~-l~~s~d~~~l~s~~--d~----~i~iw~~~~ 534 (540)
++.+..+. .|...+.. ++|+||++.|+.++ ++ .|..|++.+
T Consensus 344 ~~~~~~l~--~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 344 GRLIRQVT--KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp SCEEEECC--CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred CCEEEecC--CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 67777776 67777776 89999998876655 44 555566554
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=1.1e-21 Score=186.21 Aligned_cols=246 Identities=10% Similarity=0.095 Sum_probs=172.1
Q ss_pred eeeecCeEEEEeCCCCCEEEEeeC---CCcEEEEcCCCCe--eEEEeecCCcceeEEEEeeCCCeEEEee-CCCeEEEEE
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTCGS---DKKIKLWNPYRNL--LLKTYGGHAHEVNDATAACDSSQIASGA-SDKSVILWE 234 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~~~---dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~sp~~~~l~s~s-~dg~i~iwd 234 (540)
..+...+..++|+|||+ |++++. ++.|.+|++.+++ .+..+..+...+..++|+|||++|++++ .++.|.+|+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 34667888999999999 655544 6899999997765 4455556788899999999999988887 679999999
Q ss_pred cCC-Cc--eeEeccc---------cCCceeEEEECCCCCEEEEecCCCcEEEEEecC-CCCCCcchhhhhHhhhhcCCce
Q psy18231 235 VTT-GQ--PVRRWRE---------HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPIQVRCLNEALKEARDSI 301 (540)
Q Consensus 235 ~~~-~~--~~~~~~~---------h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~ 301 (540)
+.. +. .+..+.. +...+.+++|+|+++++++...++.|.+|++.. ++.....
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~--------------- 179 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQS--------------- 179 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEE---------------
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEee---------------
Confidence 963 32 2222221 123488999999999777777788999999983 3210000
Q ss_pred eEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhh-hccccc
Q psy18231 302 TSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL-KEARDS 380 (540)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 380 (540)
.. ......
T Consensus 180 -----------------------------------------------------------------------~~~~~~g~~ 188 (347)
T 3hfq_A 180 -----------------------------------------------------------------------VLTMEAGFG 188 (347)
T ss_dssp -----------------------------------------------------------------------EEECCTTCC
T ss_pred -----------------------------------------------------------------------eEEcCCCCC
Confidence 00 001224
Q ss_pred EEEEEecC--CeeEe-eeCCCeEEEEeCCC--Cce--EEeeeC--------CceEEEEEecCCcEEE-eecCCCeEEEEe
Q psy18231 381 ITSVHVSD--HEILT-ASLDCRIRRYDIRT--GNL--VTDYVG--------EPIVDACFTRDCQCIL-TCSTDECLRLFD 444 (540)
Q Consensus 381 v~~l~~~~--~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~~--------~~i~~~~~sp~~~~l~-~~~~dg~i~i~d 444 (540)
+..++|+| +++++ ...++.|.+|+++. ++. +..+.. ..+..++|+|||++|+ +...++.|.+||
T Consensus 189 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~ 268 (347)
T 3hfq_A 189 PRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFA 268 (347)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEE
T ss_pred CceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEE
Confidence 56789998 54444 56789999999874 443 222221 3488899999999874 555689999999
Q ss_pred cccc---chhhhhccCcCCcceEEEEecCCCCeEEEeeCC-CcEEEEEe--cCCcce
Q psy18231 445 KATG---ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD-GKIYKWQL--VDSSQI 495 (540)
Q Consensus 445 ~~~~---~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~d-g~i~iwd~--~~~~~~ 495 (540)
+... +.+..+..+...+..+ +|+|||++|++++.+ +.|.+|++ .+++..
T Consensus 269 ~~~~g~~~~~~~~~~~~~~~~~~--~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 269 VTADGHLTLIQQISTEGDFPRDF--DLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ECGGGCEEEEEEEECSSSCCCEE--EECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ECCCCcEEEeEEEecCCCCcCeE--EECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 8732 4445555555555666 899999998888754 89999955 455543
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=7.4e-22 Score=188.00 Aligned_cols=250 Identities=5% Similarity=0.041 Sum_probs=192.4
Q ss_pred cceeeeecccccce--eeeeecCeEEEEeCCCCCEEEEe-eCCCcEEEEcCCCCeeEEEeecCCcc---------eeEEE
Q psy18231 146 EWSIRVYRPLTVNR--ELFVLSGLMHTRFPVDGSYCLTC-GSDKKIKLWNPYRNLLLKTYGGHAHE---------VNDAT 213 (540)
Q Consensus 146 ~~~i~~~~~~~~~~--~~~h~~~v~~v~~spdg~~lat~-~~dg~i~iwd~~~~~~~~~~~~h~~~---------v~~l~ 213 (540)
+..|.+|+..+... ...+...+..++|+|+|++++++ ..++.|.+||..+++.+..+..+... +.+++
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELV 147 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEE
T ss_pred CccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEE
Confidence 67899999877543 33445668899999999966654 55799999999999998888765432 78899
Q ss_pred EeeCCCeEEEee--CCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhh
Q psy18231 214 AACDSSQIASGA--SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291 (540)
Q Consensus 214 ~sp~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 291 (540)
|+|+++++++++ .++.|.+||+.+++.+..+..+...+..++|+|+++++++++.++.|.+||+.+++.....
T Consensus 148 ~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~----- 222 (353)
T 3vgz_A 148 ADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK----- 222 (353)
T ss_dssp EETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE-----
T ss_pred ECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE-----
Confidence 999999887776 4789999999999998888766777899999999999999999999999998876520000
Q ss_pred HhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchh
Q psy18231 292 EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF 371 (540)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (540)
.
T Consensus 223 -----------------------------------------------------------~-------------------- 223 (353)
T 3vgz_A 223 -----------------------------------------------------------K-------------------- 223 (353)
T ss_dssp -----------------------------------------------------------E--------------------
T ss_pred -----------------------------------------------------------E--------------------
Confidence 0
Q ss_pred hhhhcccccEEEEEecC--CeeEeee-CCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeec-CCCeEEEEeccc
Q psy18231 372 QALKEARDSITSVHVSD--HEILTAS-LDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCS-TDECLRLFDKAT 447 (540)
Q Consensus 372 ~~~~~~~~~v~~l~~~~--~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~ 447 (540)
....++...+.+++++| +.+++++ .++.|.+||+.+++.+..+.......++|+|+|+++++++ .++.|.+||..+
T Consensus 224 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 224 LLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 00112345677888987 5555554 4599999999999988887765557799999999665554 689999999999
Q ss_pred cchhhhhccCcCCcceEEEEecCCCCeEEEeeCCC
Q psy18231 448 GELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG 482 (540)
Q Consensus 448 ~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg 482 (540)
++.+..+.... ....+ +|+|+|++|+++..++
T Consensus 304 ~~~~~~~~~~~-~~~~~--~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 304 YKVVKTFDTPT-HPNSL--ALSADGKTLYVSVKQK 335 (353)
T ss_dssp TEEEEEEECCS-EEEEE--EECTTSCEEEEEEECC
T ss_pred CeEEEEEecCC-CCCeE--EEcCCCCEEEEEEccc
Confidence 98887776544 33444 8999999877776654
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=1.7e-22 Score=211.40 Aligned_cols=287 Identities=11% Similarity=0.079 Sum_probs=194.8
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCc---ceeEEEEeeCCCeEEEeeC---------CCeEEEEEcC
Q psy18231 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAH---EVNDATAACDSSQIASGAS---------DKSVILWEVT 236 (540)
Q Consensus 169 ~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~sp~~~~l~s~s~---------dg~i~iwd~~ 236 (540)
+++|+|||++++++ .|++|++||+.+++....+.+|.. .+.+++|||||++|++++. +++|++||+.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 67899999766655 599999999999988777766554 4999999999999998876 7899999999
Q ss_pred CCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccc
Q psy18231 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLS 316 (540)
Q Consensus 237 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (540)
+++.+... .....+..++|+|||+.|+++. ++.|++||+.+++...+.... .. ..+
T Consensus 99 ~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~-------~~--------------~~v- 154 (719)
T 1z68_A 99 NGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNG-------RE--------------NKI- 154 (719)
T ss_dssp TTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCC-------BT--------------TTE-
T ss_pred CCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCC-------Cc--------------CCe-
Confidence 88763111 1135688999999999999886 789999999877631111000 00 000
Q ss_pred cCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEee
Q psy18231 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTA 394 (540)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~ 394 (540)
+. |.. ..+ ....-.....+++|+| +.|+++
T Consensus 155 ---------------------------------~~--g~~------------~~v-~~ee~~~~~~~~~wSPDG~~la~~ 186 (719)
T 1z68_A 155 ---------------------------------FN--GIP------------DWV-YEEEMLATKYALWWSPNGKFLAYA 186 (719)
T ss_dssp ---------------------------------EE--SSC------------CHH-HHHHTTCSSCCEEECTTSSEEEEE
T ss_pred ---------------------------------Ec--ccc------------cce-eeeecccCcccEEECCCCCEEEEE
Confidence 00 000 000 0000001224677777 566666
Q ss_pred eCCC----------------------------------eEEEEeCCCCceE--Eee--------eCCceEEEEEecCCcE
Q psy18231 395 SLDC----------------------------------RIRRYDIRTGNLV--TDY--------VGEPIVDACFTRDCQC 430 (540)
Q Consensus 395 ~~dg----------------------------------~i~iwd~~~~~~~--~~~--------~~~~i~~~~~sp~~~~ 430 (540)
+.|. .|++||+.+++.. ..+ +...+..++||||+++
T Consensus 187 ~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~ 266 (719)
T 1z68_A 187 EFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERV 266 (719)
T ss_dssp EEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEE
T ss_pred EECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeE
Confidence 5442 7899999988752 111 1246899999999887
Q ss_pred EEeecCC----CeEEEEe----ccccchhhhh----ccCcCCcc-----eEEEEecCCCCeEEE--eeCCC--cEEEEEe
Q psy18231 431 ILTCSTD----ECLRLFD----KATGELLEEY----KGHKSGDF-----RIECCLDSKDSQIFC--GSSDG--KIYKWQL 489 (540)
Q Consensus 431 l~~~~~d----g~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~~~s~~~~~l~s--~s~dg--~i~iwd~ 489 (540)
+++.... ..|.+|| ..+++....+ ..|...+. .+ .|+|||+.|+. ...+| .|++||+
T Consensus 267 ~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~spdg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 267 CLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTP--VFSYDAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp EEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCC--EECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred EEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCcc--EECCCCCeEEEEEEccCCceEEEEEEC
Confidence 7774432 3588899 8888877777 46766665 55 79999997654 44555 5777777
Q ss_pred cCCcceeEEEecccceeeeEEEEcCCCcEEEeec-C-----CeeEEEEccc
Q psy18231 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-G-----NNVKLWTAEE 534 (540)
Q Consensus 490 ~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d-----~~i~iw~~~~ 534 (540)
.+++ ...+. .+...+..+.++ +++.|+..+ + +..++|.++.
T Consensus 345 ~~~~-~~~lt--~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 345 TVEN-AIQIT--SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CSTT-CEECS--CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CCCc-eEecc--cCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 6665 44554 455567777777 887777666 6 7899998864
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=2.5e-22 Score=210.10 Aligned_cols=352 Identities=7% Similarity=0.004 Sum_probs=215.4
Q ss_pred cceeccccchhhhhhcccccceeeeecccccceee--eeec----CeEEEEeCCCCCEEEEeeC---------CCcEEEE
Q psy18231 127 PLLFSLPRTITRILYELPKEWSIRVYRPLTVNREL--FVLS----GLMHTRFPVDGSYCLTCGS---------DKKIKLW 191 (540)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~h~~----~v~~v~~spdg~~lat~~~---------dg~i~iw 191 (540)
...++++. .+++. +.+++|++|+..+..... .+.. .+.+++|||||++||+++. ++.|++|
T Consensus 20 ~~~~s~dg---~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQ---EYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSS---EEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCC---eEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 34455554 23333 347789999988765332 2222 3999999999999998876 6899999
Q ss_pred cCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEec-cccCCce-----------------eE
Q psy18231 192 NPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW-REHASKV-----------------TC 253 (540)
Q Consensus 192 d~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~h~~~v-----------------~~ 253 (540)
|+.+++.+.... ....+..++|||||+.||.+. ++.|++||+.+++..... .++...| .+
T Consensus 96 d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 96 DLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp ETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred ECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 999887631111 135688999999999999986 789999999888765533 2333222 48
Q ss_pred EEECCCCCEEEEecCC-CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeeccc
Q psy18231 254 VKFNEDSSVVISGSQD-NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYL 332 (540)
Q Consensus 254 ~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (540)
++|+|||++|++++.| +.+.+|.+....... . .....+.....+
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~-------------~---~~~~~~~yp~~g------------------- 218 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQ-------------Y---PRTINIPYPKAG------------------- 218 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSS-------------S---CEEEEEECCBTT-------------------
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCC-------------C---ccceeecCCCCC-------------------
Confidence 9999999999998765 455666554322100 0 000000000000
Q ss_pred ccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-C-eeEeeeCC----CeEEEEe--
Q psy18231 333 NGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-H-EILTASLD----CRIRRYD-- 404 (540)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l~~~~~d----g~i~iwd-- 404 (540)
.......+.+++..+......+. . .....+.+|...+.+++|+| . ++++.... ..|.+||
T Consensus 219 -------~~~~~~~l~~~d~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~ 286 (719)
T 1z68_A 219 -------AKNPVVRIFIIDTTYPAYVGPQE---V--PVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFR 286 (719)
T ss_dssp -------SCCCEEEEEEEESSCHHHHCCEE---C--CCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEEC
T ss_pred -------CCCCeeEEEEEECCCCCccceeE---c--cCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEccc
Confidence 00112344455544332110000 0 00023557888999999999 4 34443222 3488999
Q ss_pred --CCCCceEEee----eC--CceE-----EEEEecCCcEEEe--ecCCC--eEEEEeccccchhhhhccCcCCcceEEEE
Q psy18231 405 --IRTGNLVTDY----VG--EPIV-----DACFTRDCQCILT--CSTDE--CLRLFDKATGELLEEYKGHKSGDFRIECC 467 (540)
Q Consensus 405 --~~~~~~~~~~----~~--~~i~-----~~~~sp~~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 467 (540)
..+++....+ .+ ..+. .+.|+|||+.++. +..+| .|.+||+.+++ ...+..+...+..+ .
T Consensus 287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~--~ 363 (719)
T 1z68_A 287 EDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINI--F 363 (719)
T ss_dssp SSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEE--E
T ss_pred CCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEE--E
Confidence 8877765444 22 3454 7899999996554 44444 57778887665 44555555445544 4
Q ss_pred ecCCCCeEEEeeCC-----CcEEEEEecC--Cc-ceeEEEe--cccceeeeEEEEcCCCcEEEee-c-C--CeeEEEEcc
Q psy18231 468 LDSKDSQIFCGSSD-----GKIYKWQLVD--SS-QISTLIH--SVGKAVVNSLCSHPTRKHIMSA-C-G--NNVKLWTAE 533 (540)
Q Consensus 468 ~s~~~~~l~s~s~d-----g~i~iwd~~~--~~-~~~~~~~--~~~~~~v~~l~~s~d~~~l~s~-~-d--~~i~iw~~~ 533 (540)
++ +++.|+..+.+ +.+++|.+.. +. ....+.. .+|...+..+.|+||+++++.. + + ..+.+|++.
T Consensus 364 ~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~ 442 (719)
T 1z68_A 364 RV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGR 442 (719)
T ss_dssp EE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSS
T ss_pred EE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECC
Confidence 55 77777666654 8899998764 32 1233320 1256678899999999887743 3 3 478888876
Q ss_pred cc
Q psy18231 534 ED 535 (540)
Q Consensus 534 ~~ 535 (540)
++
T Consensus 443 ~g 444 (719)
T 1z68_A 443 TD 444 (719)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=1.6e-20 Score=179.41 Aligned_cols=279 Identities=11% Similarity=0.157 Sum_probs=182.7
Q ss_pred CCCCEEEEee----CCCcEEEEcC--CCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCC----CeEEEEEcCC--Cce-
Q psy18231 174 VDGSYCLTCG----SDKKIKLWNP--YRNLLLKTYGGHAHEVNDATAACDSSQIASGASD----KSVILWEVTT--GQP- 240 (540)
Q Consensus 174 pdg~~lat~~----~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d----g~i~iwd~~~--~~~- 240 (540)
+...++++|+ .++.|.+|++ .+++.......+......++|+||+++|++++.+ +.|.+|++.. ++.
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~ 90 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH 90 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE
Confidence 3444566664 3568999865 4555433222267788889999999999999886 7999999876 432
Q ss_pred -eEeccccCCceeEEEECCCCCEEEEec-CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccC
Q psy18231 241 -VRRWREHASKVTCVKFNEDSSVVISGS-QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNG 318 (540)
Q Consensus 241 -~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
+.....+......+++ ++++|++++ .++.|.+|++.......... .
T Consensus 91 ~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~---------------~--------------- 138 (361)
T 3scy_A 91 LLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPAS---------------D--------------- 138 (361)
T ss_dssp EEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCS---------------E---------------
T ss_pred EeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccc---------------e---------------
Confidence 3333345567778888 777777665 57899999997543100000 0
Q ss_pred ceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEee-e
Q psy18231 319 LLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTA-S 395 (540)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~-~ 395 (540)
.....+. .......+...+.+++|+| ++++++ .
T Consensus 139 ------------------------------~~~~~g~--------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 174 (361)
T 3scy_A 139 ------------------------------VIEFKGS--------------GPDKERQTMPHLHCVRITPDGKYLLADDL 174 (361)
T ss_dssp ------------------------------EEECCCC--------------CSCTTTCSSCCEEEEEECTTSSEEEEEET
T ss_pred ------------------------------eEEccCC--------------CCCccccCCCcceEEEECCCCCEEEEEeC
Confidence 0000000 0001112334578899998 545554 4
Q ss_pred CCCeEEEEeCCCCc-------e-------EEeee-CCceEEEEEecCCcEEEeec-CCCeEEEEeccccch--hhhhc--
Q psy18231 396 LDCRIRRYDIRTGN-------L-------VTDYV-GEPIVDACFTRDCQCILTCS-TDECLRLFDKATGEL--LEEYK-- 455 (540)
Q Consensus 396 ~dg~i~iwd~~~~~-------~-------~~~~~-~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~-- 455 (540)
.++.|.+|++.... . ..... +.....++|+|+|+++++++ .++.|.+||+.+++. +..+.
T Consensus 175 ~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~ 254 (361)
T 3scy_A 175 GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD 254 (361)
T ss_dssp TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC
T ss_pred CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC
Confidence 58999999887543 1 11111 35688999999999887776 689999999987643 22222
Q ss_pred -cCcCCcceEEEEecCCCCeEEEeeC--CCcEEEEEec--CCc--ceeEEEecccceeeeEEEEcCCCcEEEeec--CCe
Q psy18231 456 -GHKSGDFRIECCLDSKDSQIFCGSS--DGKIYKWQLV--DSS--QISTLIHSVGKAVVNSLCSHPTRKHIMSAC--GNN 526 (540)
Q Consensus 456 -~~~~~v~~~~~~~s~~~~~l~s~s~--dg~i~iwd~~--~~~--~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~--d~~ 526 (540)
.+......+ +|+|||++|+++.. ++.|.+|++. +++ .+..+. . ...+.+++|+|||++|++++ ++.
T Consensus 255 ~~~~~~~~~i--~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~--~-g~~~~~~~~spdg~~l~~~~~~~~~ 329 (361)
T 3scy_A 255 TVNAQGSGDI--HLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL--T-GIHPRNFIITPNGKYLLVACRDTNV 329 (361)
T ss_dssp SSCCCCEEEE--EECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE--C-SSCCCEEEECTTSCEEEEEETTTTE
T ss_pred CCCCCCcccE--EECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec--C-CCCCceEEECCCCCEEEEEECCCCC
Confidence 222223344 89999999877665 4899999996 444 333343 3 45688999999999888876 789
Q ss_pred eEEEEcc
Q psy18231 527 VKLWTAE 533 (540)
Q Consensus 527 i~iw~~~ 533 (540)
|.+|+++
T Consensus 330 v~v~~~d 336 (361)
T 3scy_A 330 IQIFERD 336 (361)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 9998765
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=5.4e-22 Score=191.64 Aligned_cols=270 Identities=13% Similarity=0.078 Sum_probs=184.8
Q ss_pred EEeCCCCCEEEEeeC-CC--cEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccc
Q psy18231 170 TRFPVDGSYCLTCGS-DK--KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWRE 246 (540)
Q Consensus 170 v~~spdg~~lat~~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 246 (540)
.+|||||++|+.++. ++ .|.+||+.+++......++...+..+.|+||++.|+.++.++.|.+||+.+++....+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 789999999998876 66 488889999888777777777776789999999999999999999999999987776666
Q ss_pred cCCceeEEE--ECCCCCEEEEec----------------------CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCcee
Q psy18231 247 HASKVTCVK--FNEDSSVVISGS----------------------QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSIT 302 (540)
Q Consensus 247 h~~~v~~~~--~~~~~~~l~s~~----------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (540)
+...+.... +++++.+++... .+..|.+||+.+++.
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-------------------- 180 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-------------------- 180 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE--------------------
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce--------------------
Confidence 666554444 488998877421 234455555554431
Q ss_pred EEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEE
Q psy18231 303 SVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSIT 382 (540)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 382 (540)
..+..+...+.
T Consensus 181 ---------------------------------------------------------------------~~l~~~~~~~~ 191 (388)
T 3pe7_A 181 ---------------------------------------------------------------------TVILQENQWLG 191 (388)
T ss_dssp ---------------------------------------------------------------------EEEEEESSCEE
T ss_pred ---------------------------------------------------------------------EEeecCCcccc
Confidence 01223344567
Q ss_pred EEEecC---CeeEeeeC------CCeEEEEeCCCCceEEeeeCC---ceEEEEEecCCcEEEeecC-C----CeEEEEec
Q psy18231 383 SVHVSD---HEILTASL------DCRIRRYDIRTGNLVTDYVGE---PIVDACFTRDCQCILTCST-D----ECLRLFDK 445 (540)
Q Consensus 383 ~l~~~~---~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~---~i~~~~~sp~~~~l~~~~~-d----g~i~i~d~ 445 (540)
.+.|+| +.++..+. ...|.++|...++........ .+...+|+|||+.|+..+. + ..|++||+
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 778877 44555544 337888888766543333322 4778899999998765443 2 24999999
Q ss_pred cccchh--hhhccCcC---CcceEEEEecCCCCeEEEe---------eCCCcEEEEEecCCcceeEEEecccce------
Q psy18231 446 ATGELL--EEYKGHKS---GDFRIECCLDSKDSQIFCG---------SSDGKIYKWQLVDSSQISTLIHSVGKA------ 505 (540)
Q Consensus 446 ~~~~~~--~~~~~~~~---~v~~~~~~~s~~~~~l~s~---------s~dg~i~iwd~~~~~~~~~~~~~~~~~------ 505 (540)
.+++.. ..+.++.. ..... +|+|||+.|+.. ..+..|++||+.+++. ..+. .+..
T Consensus 272 ~~g~~~~l~~~~~~~~~~~~~~~~--~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~--~~~~~~~~~~ 346 (388)
T 3pe7_A 272 ETLENRQLTSMPACSHLMSNYDGS--LMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVA--RHDTSWKVFE 346 (388)
T ss_dssp TTCCEEEEEEECCEEEEEECTTSS--EEEEEECCC------------CCCCEEEEEETTTTEE-EEEE--ECCCCCCCBT
T ss_pred CCCceEEEEcCCCceeeeecCCCC--eEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEec--cccCcccccc
Confidence 988642 22322100 01112 589999988754 4567899999887765 4444 3444
Q ss_pred -----eeeEEEEcCCCcEEEeec--CCeeEEEEcc
Q psy18231 506 -----VVNSLCSHPTRKHIMSAC--GNNVKLWTAE 533 (540)
Q Consensus 506 -----~v~~l~~s~d~~~l~s~~--d~~i~iw~~~ 533 (540)
.+.+++|+|||+.|+.++ ++...||.++
T Consensus 347 ~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 347 GDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp TBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 478899999999888665 7777777654
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=3.5e-22 Score=203.52 Aligned_cols=231 Identities=12% Similarity=0.036 Sum_probs=173.4
Q ss_pred CcceeEEEEeeCCCeEEEeeC-CCeEEEEEcCCCceeEeccccC-CceeEEEECCCCCEEEEecC---CCcEEEEEecC-
Q psy18231 206 AHEVNDATAACDSSQIASGAS-DKSVILWEVTTGQPVRRWREHA-SKVTCVKFNEDSSVVISGSQ---DNTVMMWDVKS- 279 (540)
Q Consensus 206 ~~~v~~l~~sp~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~- 279 (540)
..+|++++|+|||++||+++. ||+++||++..++..+ +..|. ..+..++|+|| +++++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 567999999999999999887 9999999996666544 44454 68999999999 77777664 45667776654
Q ss_pred -CCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceec
Q psy18231 280 -RSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQI 358 (540)
Q Consensus 280 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (540)
..... .
T Consensus 99 ~~g~~~-~------------------------------------------------------------------------ 105 (582)
T 3o4h_A 99 RPGEEQ-R------------------------------------------------------------------------ 105 (582)
T ss_dssp STTCCE-E------------------------------------------------------------------------
T ss_pred CCCccc-c------------------------------------------------------------------------
Confidence 21100 0
Q ss_pred ccccccccccchhhhhhcccccEEEEEecC-CeeEeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCC
Q psy18231 359 GDVTPISIHNSCFQALKEARDSITSVHVSD-HEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTD 437 (540)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d 437 (540)
....+...+.++++++ ..+++.+.++.+.+||+.+++......... .+++|||||++|++++.+
T Consensus 106 --------------l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 106 --------------LEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp --------------CTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEE
T ss_pred --------------ccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEc
Confidence 0011112244555555 444555555556699999887665554444 899999999999988877
Q ss_pred ----CeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCC--cEEEEEecCCcceeEEEecccceeeeEEE
Q psy18231 438 ----ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG--KIYKWQLVDSSQISTLIHSVGKAVVNSLC 511 (540)
Q Consensus 438 ----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 511 (540)
+.|++||+.+++.. .+..|...+..+ +|||||++|++++.++ .|++||+.+++.. .+. .|...+..++
T Consensus 171 ~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~--~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~--~~~~~~~~~~ 244 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLR-VFDSGEGSFSSA--SISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE--LPSKDFSSYR 244 (582)
T ss_dssp ETTEEEEEEEETTTCCCE-EECCSSCEEEEE--EECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC--CSCSHHHHHC
T ss_pred CCCCeEEEEEcCCCCCce-EeecCCCccccc--eECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc--CCCcChhhhh
Confidence 78999999888754 566777666555 8999999999888888 8999999988877 554 6777777777
Q ss_pred --------EcCCCcEEEeec-CCeeEEEEc
Q psy18231 512 --------SHPTRKHIMSAC-GNNVKLWTA 532 (540)
Q Consensus 512 --------~s~d~~~l~s~~-d~~i~iw~~ 532 (540)
|+|||.++++++ |+++++|++
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 999998888888 999999998
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=6.4e-20 Score=175.11 Aligned_cols=285 Identities=8% Similarity=0.057 Sum_probs=185.1
Q ss_pred cccceeeeecccc--cce---eeeeecCeEEEEeCCCCCEEEEeeCC----CcEEEEcCCC--Ce--eEEEeecCCccee
Q psy18231 144 PKEWSIRVYRPLT--VNR---ELFVLSGLMHTRFPVDGSYCLTCGSD----KKIKLWNPYR--NL--LLKTYGGHAHEVN 210 (540)
Q Consensus 144 ~~~~~i~~~~~~~--~~~---~~~h~~~v~~v~~spdg~~lat~~~d----g~i~iwd~~~--~~--~~~~~~~h~~~v~ 210 (540)
+.+..|.+|.... ... ...+...+..++|+|||++|++++.+ +.|.+|++.. ++ .+.....+.....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred CCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 3455677776532 211 11267788899999999999998875 7999998765 43 3334444556677
Q ss_pred EEEEeeCCCeEEEee-CCCeEEEEEcCCCceeEecc--------------ccCCceeEEEECCCCCEEEEec-CCCcEEE
Q psy18231 211 DATAACDSSQIASGA-SDKSVILWEVTTGQPVRRWR--------------EHASKVTCVKFNEDSSVVISGS-QDNTVMM 274 (540)
Q Consensus 211 ~l~~sp~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~--------------~h~~~v~~~~~~~~~~~l~s~~-~dg~i~i 274 (540)
.+++ ++++|++++ .++.|.+|++.....+..+. .+...+.+++|+|+|+++++++ .++.|.+
T Consensus 104 ~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v 181 (361)
T 3scy_A 104 YLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHK 181 (361)
T ss_dssp EEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEE
Confidence 7777 788777766 57899999997543332211 1233468899999999666554 5789999
Q ss_pred EEecCCCC----CCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEe
Q psy18231 275 WDVKSRSH----HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLL 350 (540)
Q Consensus 275 wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (540)
|++..... ..+.. . +.
T Consensus 182 ~~~~~~~~~~~~~~l~~----------------~----------------------------------------~~---- 201 (361)
T 3scy_A 182 FNINPNANADNKEKFLT----------------K----------------------------------------GT---- 201 (361)
T ss_dssp EEECTTCCTTTCCCCEE----------------E----------------------------------------EE----
T ss_pred EEEcCCCCcccccceee----------------c----------------------------------------cc----
Confidence 99876431 00000 0 00
Q ss_pred ecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeee-CCCeEEEEeCCCCce--EEeeeC-----CceE
Q psy18231 351 DFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTAS-LDCRIRRYDIRTGNL--VTDYVG-----EPIV 420 (540)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~-~dg~i~iwd~~~~~~--~~~~~~-----~~i~ 420 (540)
.......+...+..++|+| +++++++ .++.|.+||+.+++. +..+.. ....
T Consensus 202 -------------------~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~ 262 (361)
T 3scy_A 202 -------------------PEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSG 262 (361)
T ss_dssp -------------------EEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEE
T ss_pred -------------------ccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcc
Confidence 0000011234467899998 5566666 689999999987754 233322 3467
Q ss_pred EEEEecCCcEEEeecCC--CeEEEEecc--ccc--hhhhhccCcCCcceEEEEecCCCCeEEEee-CCCcEEEEEec--C
Q psy18231 421 DACFTRDCQCILTCSTD--ECLRLFDKA--TGE--LLEEYKGHKSGDFRIECCLDSKDSQIFCGS-SDGKIYKWQLV--D 491 (540)
Q Consensus 421 ~~~~sp~~~~l~~~~~d--g~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s-~dg~i~iwd~~--~ 491 (540)
.++|+|||++|+++..+ +.|.+|++. +++ .+..+.. ...+..+ +|+|||++|++++ .++.|.+|++. +
T Consensus 263 ~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~--~~spdg~~l~~~~~~~~~v~v~~~d~~~ 339 (361)
T 3scy_A 263 DIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNF--IITPNGKYLLVACRDTNVIQIFERDQAT 339 (361)
T ss_dssp EEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEE--EECTTSCEEEEEETTTTEEEEEEECTTT
T ss_pred cEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceE--EECCCCCEEEEEECCCCCEEEEEEECCC
Confidence 99999999998776654 899999985 343 3333433 3344555 8999999988887 67899997654 5
Q ss_pred CcceeEEEecccceeeeEEEEc
Q psy18231 492 SSQISTLIHSVGKAVVNSLCSH 513 (540)
Q Consensus 492 ~~~~~~~~~~~~~~~v~~l~~s 513 (540)
++...... ..+...+.|+.|.
T Consensus 340 g~~~~~~~-~~~~~~p~~v~~~ 360 (361)
T 3scy_A 340 GLLTDIKK-DIKVDKPVCLKFV 360 (361)
T ss_dssp CCEEECSC-CEECSSEEEEEEE
T ss_pred CcEeecce-eeeCCCCeEEEEc
Confidence 55433221 1244568888886
No 159
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4.1e-21 Score=186.91 Aligned_cols=206 Identities=11% Similarity=0.116 Sum_probs=157.2
Q ss_pred eeeeecccccceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCC----------eeE------EEeecCCcceeE
Q psy18231 148 SIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRN----------LLL------KTYGGHAHEVND 211 (540)
Q Consensus 148 ~i~~~~~~~~~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~----------~~~------~~~~~h~~~v~~ 211 (540)
.+++|+.... .....++.+++++++.++++++.++ +++|+.... ..+ ..+ .|...|.+
T Consensus 24 ~vri~~~~~~----~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 97 (434)
T 2oit_A 24 KVRIFDSPEE----LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHH 97 (434)
T ss_dssp EEECSCCCSS----CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEE
T ss_pred eEEecCCccc----cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccE
Confidence 5677765321 1235689999999999999999887 888764211 011 112 35678999
Q ss_pred EEEeeCCCeEE----EeeCCCeEEEEEcCCC--------ce---eEeccccCCceeEEEECCC-CCEEEEecCCCcEEEE
Q psy18231 212 ATAACDSSQIA----SGASDKSVILWEVTTG--------QP---VRRWREHASKVTCVKFNED-SSVVISGSQDNTVMMW 275 (540)
Q Consensus 212 l~~sp~~~~l~----s~s~dg~i~iwd~~~~--------~~---~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iw 275 (540)
++|+|++++|+ +++.|++|+|||+.++ +. +..+.+|...|.+++|+|+ +++|++++.||+|++|
T Consensus 98 l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 98 LALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp EEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 99999999999 8899999999999765 22 4556789999999999997 7899999999999999
Q ss_pred EecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccc
Q psy18231 276 DVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGS 355 (540)
Q Consensus 276 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (540)
|++++.. .
T Consensus 178 D~~~~~~--~---------------------------------------------------------------------- 185 (434)
T 2oit_A 178 QVTETVK--V---------------------------------------------------------------------- 185 (434)
T ss_dssp EESSSEE--E----------------------------------------------------------------------
T ss_pred EcCCCcc--e----------------------------------------------------------------------
Confidence 9987631 0
Q ss_pred eecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC---------CceEEEEE
Q psy18231 356 TQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG---------EPIVDACF 424 (540)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------~~i~~~~~ 424 (540)
....+|...|.+++|+| ++|++|+.||.|++||++ ++....+.. ..+.+++|
T Consensus 186 ----------------~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 186 ----------------CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp ----------------EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred ----------------eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEE
Confidence 02235778899999998 899999999999999998 555444421 17899999
Q ss_pred ecCCcEEEeec-CCC------eEEEEecccc
Q psy18231 425 TRDCQCILTCS-TDE------CLRLFDKATG 448 (540)
Q Consensus 425 sp~~~~l~~~~-~dg------~i~i~d~~~~ 448 (540)
++++.++++.+ .|| .+++||+.+.
T Consensus 249 ~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 249 IGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99988876533 333 3899999765
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4.1e-21 Score=186.90 Aligned_cols=262 Identities=8% Similarity=0.070 Sum_probs=175.9
Q ss_pred CcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc----------eeEe-----ccccCCc
Q psy18231 186 KKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ----------PVRR-----WREHASK 250 (540)
Q Consensus 186 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~----------~~~~-----~~~h~~~ 250 (540)
+.+++|+.... .+...+..+++++++.++++++.|+ +++|+..... .+.. ...+...
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 56888875321 1345688999999999999999988 8998764211 1111 1135678
Q ss_pred eeEEEECCCCCEEE----EecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEe
Q psy18231 251 VTCVKFNEDSSVVI----SGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFA 326 (540)
Q Consensus 251 v~~~~~~~~~~~l~----s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (540)
|.+++|+|++++|+ +++.|+.|++||+.+........ ..
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~----------~~--------------------------- 137 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQ----------KR--------------------------- 137 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSS----------CC---------------------------
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCC----------cc---------------------------
Confidence 99999999999999 88999999999987641000000 00
Q ss_pred eeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeEeeeCCCeEEEE
Q psy18231 327 FRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILTASLDCRIRRY 403 (540)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~~dg~i~iw 403 (540)
.......+.+|...|.+++|+| .++++++.||+|++|
T Consensus 138 ----------------------------------------~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 138 ----------------------------------------PFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp ----------------------------------------CSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred ----------------------------------------eeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 0000124567899999999998 579999999999999
Q ss_pred eCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcC-----CcceEEEEecCCCCeEE
Q psy18231 404 DIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKS-----GDFRIECCLDSKDSQIF 476 (540)
Q Consensus 404 d~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~v~~~~~~~s~~~~~l~ 476 (540)
|++++..+....+ ..+.+++|+|+|++|++|+.||.|++||.+ ++....+..|.. ......++|++++.+++
T Consensus 178 D~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~ 256 (434)
T 2oit_A 178 QVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAI 256 (434)
T ss_dssp EESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEE
T ss_pred EcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEE
Confidence 9999876655543 579999999999999999999999999998 544444433321 12344458899888765
Q ss_pred Ee-eCCC------cEEEEEecCCcc--eeEEE---ec-----ccceeeeEEEEcCCCcEEEeec--CCeeEEEEcc
Q psy18231 477 CG-SSDG------KIYKWQLVDSSQ--ISTLI---HS-----VGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAE 533 (540)
Q Consensus 477 s~-s~dg------~i~iwd~~~~~~--~~~~~---~~-----~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~ 533 (540)
+. +.|| .+++|++...+. ...+. .. ....+-..+.+-++.+++++++ .+.|.+....
T Consensus 257 ~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 257 VYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp EEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred EEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 43 3443 389999976531 11111 00 1122222344447777776665 6666666643
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=3.6e-20 Score=175.97 Aligned_cols=283 Identities=8% Similarity=0.037 Sum_probs=183.5
Q ss_pred hhhhcccccceeeeeccccccee--eeeec--CeEEEEeCCCCCEEE-EeeCCCcEEEEcCCCCeeEEEeecCC------
Q psy18231 138 RILYELPKEWSIRVYRPLTVNRE--LFVLS--GLMHTRFPVDGSYCL-TCGSDKKIKLWNPYRNLLLKTYGGHA------ 206 (540)
Q Consensus 138 ~~~~~~~~~~~i~~~~~~~~~~~--~~h~~--~v~~v~~spdg~~la-t~~~dg~i~iwd~~~~~~~~~~~~h~------ 206 (540)
.++.....+..|.+|+..+.... ..... .+..++|+|||++++ ++..++.|.+||+.+++.+..+..+.
T Consensus 12 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~ 91 (349)
T 1jmx_B 12 EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVG 91 (349)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccc
Confidence 34455567788999998775432 22233 688999999998765 45568999999999999887776332
Q ss_pred cceeEEEEeeCCCeEEEeeCC------------CeEEEEEcCCCcee---EeccccCCceeEEEECCCCCEEEEecCCCc
Q psy18231 207 HEVNDATAACDSSQIASGASD------------KSVILWEVTTGQPV---RRWREHASKVTCVKFNEDSSVVISGSQDNT 271 (540)
Q Consensus 207 ~~v~~l~~sp~~~~l~s~s~d------------g~i~iwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 271 (540)
..+.+++|+|+|++|++++.+ +.|.+||+.+++.. ..+. +...+.+++|+|+++ +++++. .
T Consensus 92 ~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~ 167 (349)
T 1jmx_B 92 RSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--D 167 (349)
T ss_dssp ECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--S
T ss_pred ccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--c
Confidence 337899999999999998865 89999999885433 3333 344688999999999 555543 4
Q ss_pred EEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEee
Q psy18231 272 VMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD 351 (540)
Q Consensus 272 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (540)
|.+||+.+++..... ........ .. .. ...+.++.
T Consensus 168 i~~~d~~~~~~~~~~---------------------~~~~~~~~------------------~~-----~~-~~~~~~~~ 202 (349)
T 1jmx_B 168 IYKMDVKTGKYTVAL---------------------PLRNWNRK------------------GY-----SA-PDVLYFWP 202 (349)
T ss_dssp EEEECTTTCCEEEEE---------------------CSTTCCCT------------------TB-----CC-CBCCCCCC
T ss_pred EEEEeCCCCceeccc---------------------cccccCCc------------------cc-----cC-ccceeeec
Confidence 999999877621100 00000000 00 00 00000000
Q ss_pred cccceecccccccccccchhhhhhcccccEEEEEecC-------------CeeEeeeCCCeEEEEeCCCCceEEeeeCCc
Q psy18231 352 FLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-------------HEILTASLDCRIRRYDIRTGNLVTDYVGEP 418 (540)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-------------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 418 (540)
.. ...........+++++ .++.....++.+++|++.. .+..
T Consensus 203 ~~-------------------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 256 (349)
T 1jmx_B 203 HQ-------------------SPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD-------LTEL 256 (349)
T ss_dssp CC-------------------CTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE-------CSSC
T ss_pred CC-------------------CcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc-------CCCc
Confidence 00 0000000112233332 1111223344444444421 3457
Q ss_pred eEEEEEec-CCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeE
Q psy18231 419 IVDACFTR-DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIST 497 (540)
Q Consensus 419 i~~~~~sp-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 497 (540)
+..++|+| ++++++++ ++.|.+||+.+++.+..+.... .+..+ +|+|+|++|++++.++.|++||+.+++.+..
T Consensus 257 ~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~-~~~~~--~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 257 YFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH-TYYCV--AFDKKGDKLYLGGTFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp EEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS-CCCEE--EECSSSSCEEEESBSSEEEEEETTTTEEEEE
T ss_pred ceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC-Cccce--EECCCCCEEEEecCCCeEEEEeccccceeee
Confidence 88999999 99999988 8899999999998877765433 34555 8999999999898999999999999998888
Q ss_pred EEe
Q psy18231 498 LIH 500 (540)
Q Consensus 498 ~~~ 500 (540)
+..
T Consensus 332 ~~~ 334 (349)
T 1jmx_B 332 IKL 334 (349)
T ss_dssp EEC
T ss_pred eec
Confidence 873
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=1e-19 Score=173.68 Aligned_cols=272 Identities=9% Similarity=0.030 Sum_probs=179.9
Q ss_pred EEEEeeCC--CcEEEEcC--CCCeeEE--Eee-cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcC-CCceeEecccc-C
Q psy18231 178 YCLTCGSD--KKIKLWNP--YRNLLLK--TYG-GHAHEVNDATAACDSSQIASGASDKSVILWEVT-TGQPVRRWREH-A 248 (540)
Q Consensus 178 ~lat~~~d--g~i~iwd~--~~~~~~~--~~~-~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~h-~ 248 (540)
+|++|+.. +.|.+|++ .+++... ... .....+..++|+|++++|++++.+ .|.+|++. +++........ .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 45566553 56777654 5665432 221 234578899999999999999888 99999997 77665433211 1
Q ss_pred CceeEEEECCCCCE--EEEec-------------CCCcEEEEEecC-CCCCCcchhhhhHhhhhcCCceeEEEEeecccc
Q psy18231 249 SKVTCVKFNEDSSV--VISGS-------------QDNTVMMWDVKS-RSHHPIQVRCLNEALKEARDSITSVHSLVKSTK 312 (540)
Q Consensus 249 ~~v~~~~~~~~~~~--l~s~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
+.+..++|+|+|++ +++++ .+|++.+|++.. ++.....
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~-------------------------- 136 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV-------------------------- 136 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE--------------------------
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE--------------------------
Confidence 33566899999984 55553 688999999874 3210000
Q ss_pred cccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhh-hcccccEEEEEecC--C
Q psy18231 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL-KEARDSITSVHVSD--H 389 (540)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~--~ 389 (540)
..+ ..+...+.+++|+| +
T Consensus 137 -----------------------------------------------------------~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 137 -----------------------------------------------------------QNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp -----------------------------------------------------------EEEECCTTCCEEEEEECTTSS
T ss_pred -----------------------------------------------------------eeEEeCCCCcceEEEECCCCC
Confidence 000 01345678899998 5
Q ss_pred eeEeee-CCCeEEEEeCC-CCceE--Eeee----CCceEEEEEecCCcEEEeecC-CCeEEEEecc--ccchh------h
Q psy18231 390 EILTAS-LDCRIRRYDIR-TGNLV--TDYV----GEPIVDACFTRDCQCILTCST-DECLRLFDKA--TGELL------E 452 (540)
Q Consensus 390 ~l~~~~-~dg~i~iwd~~-~~~~~--~~~~----~~~i~~~~~sp~~~~l~~~~~-dg~i~i~d~~--~~~~~------~ 452 (540)
+++++. .++.|++||++ +++.. ..+. +..+..++|+|||+++++++. ++.|.+|++. +++.. .
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 237 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP 237 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence 666655 46899999998 67643 3332 456899999999999887765 7899999765 45432 1
Q ss_pred hhcc----CcC----CcceEEEE-ecCCCCeEEEeeCCC------cEEEEEec-CCcceeEEE-ecccceeeeEEEEcC-
Q psy18231 453 EYKG----HKS----GDFRIECC-LDSKDSQIFCGSSDG------KIYKWQLV-DSSQISTLI-HSVGKAVVNSLCSHP- 514 (540)
Q Consensus 453 ~~~~----~~~----~v~~~~~~-~s~~~~~l~s~s~dg------~i~iwd~~-~~~~~~~~~-~~~~~~~v~~l~~s~- 514 (540)
.+.. |.. ......++ |+|||++|++++.+. .|.+|++. +++...... ...+...+..++|+|
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~ 317 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPC 317 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEEC
T ss_pred cCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCC
Confidence 2221 121 00223348 999999988776432 89999996 565443211 113455678899999
Q ss_pred --CCcEEEeec--CCeeEEEEcccc
Q psy18231 515 --TRKHIMSAC--GNNVKLWTAEED 535 (540)
Q Consensus 515 --d~~~l~s~~--d~~i~iw~~~~~ 535 (540)
||++|++++ ++.|++|+++.+
T Consensus 318 ~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 318 PWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CcCCCEEEEEEcCCCeEEEEEEchh
Confidence 899999987 489999998654
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=9.6e-20 Score=173.93 Aligned_cols=241 Identities=12% Similarity=0.115 Sum_probs=168.0
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCC-CCeeEEEeecC-CcceeEEEEeeCCCe--EEEee-------------CC
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPY-RNLLLKTYGGH-AHEVNDATAACDSSQ--IASGA-------------SD 227 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~-~~~~~~~~~~h-~~~v~~l~~sp~~~~--l~s~s-------------~d 227 (540)
..+..++|+|||++|++++.+ .|.+|++. +++........ .+....++|+|||++ +++++ .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 368899999999999998887 99999987 77765433211 133566899999994 55553 68
Q ss_pred CeEEEEEcC-CCceeEecc----ccCCceeEEEECCCCCEEEEecC-CCcEEEEEec-CCCCCCcchhhhhHhhhhcCCc
Q psy18231 228 KSVILWEVT-TGQPVRRWR----EHASKVTCVKFNEDSSVVISGSQ-DNTVMMWDVK-SRSHHPIQVRCLNEALKEARDS 300 (540)
Q Consensus 228 g~i~iwd~~-~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~ 300 (540)
+++.+|++. +++....+. .+...+.+++|+|||++|++++. ++.|.+||+. +++.....
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~-------------- 184 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVG-------------- 184 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEE--------------
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEee--------------
Confidence 999999997 466544433 25568999999999998887653 6799999997 55410000
Q ss_pred eeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhccccc
Q psy18231 301 ITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDS 380 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (540)
.. ....|...
T Consensus 185 ---------------------------------------------------------------------~~-~~~~~g~~ 194 (365)
T 1jof_A 185 ---------------------------------------------------------------------SV-DAPDPGDH 194 (365)
T ss_dssp ---------------------------------------------------------------------EE-ECSSTTCC
T ss_pred ---------------------------------------------------------------------eE-ecCCCCCC
Confidence 00 00112345
Q ss_pred EEEEEecC--CeeEeeeC-CCeEEEEeCC--CCceE---Eee---eC-----C-------ceEEEE-EecCCcEEEeecC
Q psy18231 381 ITSVHVSD--HEILTASL-DCRIRRYDIR--TGNLV---TDY---VG-----E-------PIVDAC-FTRDCQCILTCST 436 (540)
Q Consensus 381 v~~l~~~~--~~l~~~~~-dg~i~iwd~~--~~~~~---~~~---~~-----~-------~i~~~~-~sp~~~~l~~~~~ 436 (540)
+..++|+| +++++++. ++.|.+|+++ +++.. ..+ .. . .+..++ |+|||++|++++.
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 78899998 56766664 7899999765 45542 122 11 1 478999 9999999887764
Q ss_pred C-C-----eEEEEecc-ccchhh---hhccCcCCcceEEEEecC---CCCeEEEeeCC-CcEEEEEecCC
Q psy18231 437 D-E-----CLRLFDKA-TGELLE---EYKGHKSGDFRIECCLDS---KDSQIFCGSSD-GKIYKWQLVDS 492 (540)
Q Consensus 437 d-g-----~i~i~d~~-~~~~~~---~~~~~~~~v~~~~~~~s~---~~~~l~s~s~d-g~i~iwd~~~~ 492 (540)
+ + .|.+|++. +++... ....+......+ +|+| ||++|++++.+ +.|.+|++...
T Consensus 275 ~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~--a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSN--AVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCC--CEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccc--eecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 3 2 89999986 555432 122333344555 7899 89999998864 89999998765
No 164
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=3.3e-19 Score=169.25 Aligned_cols=280 Identities=12% Similarity=0.119 Sum_probs=194.5
Q ss_pred ccceeeeeccccccee---eeeecCeEEEEeCCCCCEEEEee----------CCCcEEEEcCCCCeeEEEeecC------
Q psy18231 145 KEWSIRVYRPLTVNRE---LFVLSGLMHTRFPVDGSYCLTCG----------SDKKIKLWNPYRNLLLKTYGGH------ 205 (540)
Q Consensus 145 ~~~~i~~~~~~~~~~~---~~h~~~v~~v~~spdg~~lat~~----------~dg~i~iwd~~~~~~~~~~~~h------ 205 (540)
.+..+.+|+..+.... ..+..+ .++|+|||++|+++. .+++|.+||..+++.+.++...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 3567888887664422 123344 899999999999876 3678999999999988887643
Q ss_pred CcceeEEEEeeCCCeEEEeeC--CCeEEEEEcCCCceeEe-ccccCCceeEEEECCCC-CEEEEecCCCcEEEEEecCCC
Q psy18231 206 AHEVNDATAACDSSQIASGAS--DKSVILWEVTTGQPVRR-WREHASKVTCVKFNEDS-SVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 206 ~~~v~~l~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~ 281 (540)
......++++|||++|+++.. +++|.+||+.+++.+.. +.. .+ ...+.+.|++ ..+++.+.||.+.+|++....
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 345678999999999998874 58999999999988877 643 22 2335677765 677888899999999986522
Q ss_pred CCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccc
Q psy18231 282 HHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDV 361 (540)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (540)
. ... ... ...
T Consensus 185 ~-~~~----------------~~~-------------------------------------------------~~~---- 194 (361)
T 2oiz_A 185 K-VAS----------------QSR-------------------------------------------------SKQ---- 194 (361)
T ss_dssp S-EEE----------------EEE-------------------------------------------------CCC----
T ss_pred c-Eee----------------ecc-------------------------------------------------ccc----
Confidence 1 000 000 000
Q ss_pred cccccccchhhhhhcccccEEEE--EecCCeeEeeeCCCeEEEEeCCCCce--EEeee--C----------CceEEEEEe
Q psy18231 362 TPISIHNSCFQALKEARDSITSV--HVSDHEILTASLDCRIRRYDIRTGNL--VTDYV--G----------EPIVDACFT 425 (540)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~v~~l--~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~--~----------~~i~~~~~s 425 (540)
.+.....++ .+ ...+..++..+.++.+.++|+..... ...+. . .....++|+
T Consensus 195 -----------~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~ 262 (361)
T 2oiz_A 195 -----------MFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH 262 (361)
T ss_dssp -----------CSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE
T ss_pred -----------eEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe
Confidence 000000000 00 11123455556788899999875542 12111 0 112237899
Q ss_pred cCCcEEEeecC-----------CCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCC--
Q psy18231 426 RDCQCILTCST-----------DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS-- 492 (540)
Q Consensus 426 p~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~-- 492 (540)
|+++.++++.. .+.|.+||+.+++.+.++..+. ...+ +|+|||++|++++. ++|.+||..++
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~i--a~spdg~~l~v~n~-~~v~v~D~~t~~l 337 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSM--TIDQQRNLMLTLDG-GNVNVYDISQPEP 337 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEE--EEETTTTEEEEECS-SCEEEEECSSSSC
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEE--EECCCCCEEEEeCC-CeEEEEECCCCcc
Confidence 99888777543 3589999999999999988877 6666 89999999998887 99999999999
Q ss_pred cceeEEEecccceeeeEEEEcCCCc
Q psy18231 493 SQISTLIHSVGKAVVNSLCSHPTRK 517 (540)
Q Consensus 493 ~~~~~~~~~~~~~~v~~l~~s~d~~ 517 (540)
+.+.++. .+......++++|+|.
T Consensus 338 ~~~~~i~--~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 338 KLLRTIE--GAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEEET--TSCSSEEEEEECCCSC
T ss_pred eeeEEec--cCCCCcEEEEecCCCC
Confidence 8888875 5667788999999986
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=1.1e-19 Score=190.06 Aligned_cols=316 Identities=10% Similarity=0.047 Sum_probs=180.9
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcc-----eeEEEEeeCCCeEEEeeCC---------CeEE
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE-----VNDATAACDSSQIASGASD---------KSVI 231 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~-----v~~l~~sp~~~~l~s~s~d---------g~i~ 231 (540)
...+++|+|||++|+++ |++|++||+.+++....+.+|... ..+++|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35688999999999886 999999999999988888877643 2447899999999998876 5667
Q ss_pred EEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccc
Q psy18231 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKST 311 (540)
Q Consensus 232 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (540)
+||+.+++.. .+..|...+...+|||||+.|+.+. |+.|.+|++.+++...+.... ..
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g-------~~------------- 153 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTG-------KE------------- 153 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCC-------BT-------------
T ss_pred EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCC-------Cc-------------
Confidence 9999998754 4667788899999999999999885 689999999877632111000 00
Q ss_pred ccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCee
Q psy18231 312 KNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEI 391 (540)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l 391 (540)
.....+... +.+. ...-+.......+.++..+++. ......+..+...... ....+...+..+.+..
T Consensus 154 -~~~~~g~~~---~v~~-ee~~~~~~~~~wSpDg~~la~~---~~d~~~v~~~~~~~~~--~~~~~~~~~~~~~yp~--- 220 (740)
T 4a5s_A 154 -DIIYNGITD---WVYE-EEVFSAYSALWWSPNGTFLAYA---QFNDTEVPLIEYSFYS--DESLQYPKTVRVPYPK--- 220 (740)
T ss_dssp -TTEEESBCC---HHHH-HHTSSSSBCEEECTTSSEEEEE---EEECTTCCEEEEEECC--STTCSSCEEEEEECCB---
T ss_pred -cceecCccc---cccc-chhcCCCcceEECCCCCEEEEE---EEcccCCceEEEEeec--CCCCCCCcceeecCCC---
Confidence 000000000 0000 0000001112223333222211 0000000000000000 0001222233333322
Q ss_pred EeeeC--CCeEEEEeCCC---Cc--eEEeee--------CCceEEEEEecCCcEEEeec----CCCeEEEEeccccc---
Q psy18231 392 LTASL--DCRIRRYDIRT---GN--LVTDYV--------GEPIVDACFTRDCQCILTCS----TDECLRLFDKATGE--- 449 (540)
Q Consensus 392 ~~~~~--dg~i~iwd~~~---~~--~~~~~~--------~~~i~~~~~sp~~~~l~~~~----~dg~i~i~d~~~~~--- 449 (540)
.|.. ...|++||+.+ ++ ....+. ...+..++|+|||+.++... .+..|++||+.+++
T Consensus 221 -~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~ 299 (740)
T 4a5s_A 221 -AGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRW 299 (740)
T ss_dssp -TTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEE
T ss_pred -CcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccc
Confidence 1111 22688999998 73 222332 24588999999999766543 34479999999887
Q ss_pred -hh--hhh--ccCcCCcc---eEEEEecCCCCeEE-EeeC-C--CcEEEEEecCCcceeEEEecccceeeeEEEEcCCCc
Q psy18231 450 -LL--EEY--KGHKSGDF---RIECCLDSKDSQIF-CGSS-D--GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 517 (540)
Q Consensus 450 -~~--~~~--~~~~~~v~---~~~~~~s~~~~~l~-s~s~-d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 517 (540)
+. ..+ ..|...+. ....+|+|||+.|+ ..+. + ..|++||+..++.. .+. .....|..+.+ +|++
T Consensus 300 ~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT--~g~~~v~~~~~-~d~~ 375 (740)
T 4a5s_A 300 NCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FIT--KGTWEVIGIEA-LTSD 375 (740)
T ss_dssp EECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESC--CSSSCEEEEEE-ECSS
T ss_pred ceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecc--cCCEEEEEEEE-EeCC
Confidence 32 333 44555544 11237999999877 6653 3 46888887665443 443 23444555432 3465
Q ss_pred EEEeec
Q psy18231 518 HIMSAC 523 (540)
Q Consensus 518 ~l~s~~ 523 (540)
.|+..+
T Consensus 376 ~i~f~~ 381 (740)
T 4a5s_A 376 YLYYIS 381 (740)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555443
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=1.9e-20 Score=181.17 Aligned_cols=297 Identities=10% Similarity=-0.002 Sum_probs=178.2
Q ss_pred eecCeEEEEeCCCCCEEEEeeCC---CcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc
Q psy18231 163 VLSGLMHTRFPVDGSYCLTCGSD---KKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239 (540)
Q Consensus 163 h~~~v~~v~~spdg~~lat~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 239 (540)
|...+..++|||||++|+..... ..|.+||+.+++......++......+.|+|||++|+.++.++.|.+||+.+++
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 34457788999999998876442 478889998887654433333333348899999999999999999999999887
Q ss_pred eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccc-cccC
Q psy18231 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNH-LSNG 318 (540)
Q Consensus 240 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 318 (540)
.......+.. |+++++.|+..+.++...+|.....- ++.+. +...
T Consensus 114 ~~~~~~~~~~------~~~~g~~l~~~~~~~~~~~~~~~~~~----------------------------spdg~~~~~~ 159 (396)
T 3c5m_A 114 EQVIYTVDEE------WKGYGTWVANSDCTKLVGIEILKRDW----------------------------QPLTSWEKFA 159 (396)
T ss_dssp EEEEEECCTT------EEEEEEEEECTTSSEEEEEEEEGGGC----------------------------CCCCSHHHHH
T ss_pred cEEEEecccc------cCCCCCEEEeccCCcccccccccccc----------------------------CCCCcceeee
Confidence 6655544443 45555666655555444444321000 00000 0000
Q ss_pred ceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---CeeEeee
Q psy18231 319 LLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---HEILTAS 395 (540)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~~~~ 395 (540)
. .........+.+++..+... ..+..+...+..+.|+| +.++..+
T Consensus 160 ~------------------~~~~~~~~~l~~~d~~~g~~--------------~~~~~~~~~~~~~~~sp~dg~~l~~~~ 207 (396)
T 3c5m_A 160 E------------------FYHTNPTCRLIKVDIETGEL--------------EVIHQDTAWLGHPIYRPFDDSTVGFCH 207 (396)
T ss_dssp H------------------HHHTCCCEEEEEEETTTCCE--------------EEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred e------------------eccCCCcceEEEEECCCCcE--------------EeeccCCcccccceECCCCCCEEEEEe
Confidence 0 00000111122222111100 01113345567778876 3355444
Q ss_pred CC------CeEEEEeCCCCceEEeeeC---CceEEEEEecCCcEEEeecCC-----CeEEEEeccccchhhhhccCcCCc
Q psy18231 396 LD------CRIRRYDIRTGNLVTDYVG---EPIVDACFTRDCQCILTCSTD-----ECLRLFDKATGELLEEYKGHKSGD 461 (540)
Q Consensus 396 ~d------g~i~iwd~~~~~~~~~~~~---~~i~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~v 461 (540)
.+ ..|.+||+.+++....... ..+..++|+|+|++|+..+.+ +.|++||+.+++...... ... .
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~ 285 (396)
T 3c5m_A 208 EGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-C 285 (396)
T ss_dssp CSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-E
T ss_pred cCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-C
Confidence 33 4688999876654333332 257889999999988776543 459999998876432221 111 1
Q ss_pred ceEEEEecC-CCCeEEEee----------------CCCcEEEEEecCCcceeEEEecccce-----------eeeEEEEc
Q psy18231 462 FRIECCLDS-KDSQIFCGS----------------SDGKIYKWQLVDSSQISTLIHSVGKA-----------VVNSLCSH 513 (540)
Q Consensus 462 ~~~~~~~s~-~~~~l~s~s----------------~dg~i~iwd~~~~~~~~~~~~~~~~~-----------~v~~l~~s 513 (540)
. ..|+| ||+++++++ .+..|++||+.+++.. .+. .+.. .+..++|+
T Consensus 286 ~---~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~--~~~~~~~~~~~~~~~~~~~~~~s 359 (396)
T 3c5m_A 286 S---HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLC--KHSTSWDVLDGDRQITHPHPSFT 359 (396)
T ss_dssp E---EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEE--ECCCCCCCBTTBSSTTCCCCEEC
T ss_pred C---CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-Ecc--CCCCccccccccccCCCCCceEc
Confidence 1 47999 999888754 3478999998877653 444 3433 25678999
Q ss_pred CCCcEEEeec--CCeeEEEEcc
Q psy18231 514 PTRKHIMSAC--GNNVKLWTAE 533 (540)
Q Consensus 514 ~d~~~l~s~~--d~~i~iw~~~ 533 (540)
|||+.|+.++ ++...+|.++
T Consensus 360 ~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 360 PNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TTSSEEEEEECTTSSCEEEEEE
T ss_pred cCCCeEEEEecCCCCceEEEEE
Confidence 9999887766 6666666654
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=6.5e-19 Score=167.24 Aligned_cols=264 Identities=10% Similarity=0.090 Sum_probs=187.7
Q ss_pred CCCCEEEEee------CCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeC----------CCeEEEEEcCC
Q psy18231 174 VDGSYCLTCG------SDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS----------DKSVILWEVTT 237 (540)
Q Consensus 174 pdg~~lat~~------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~----------dg~i~iwd~~~ 237 (540)
++++++++.. .|+.|.+||..+++.+.++..+..+ .++|+||+++|++++. +++|.+||+.+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 3666766543 3789999999999999888876665 8999999999998863 67899999999
Q ss_pred CceeEecccc------CCceeEEEECCCCCEEEEecC--CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeec
Q psy18231 238 GQPVRRWREH------ASKVTCVKFNEDSSVVISGSQ--DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVK 309 (540)
Q Consensus 238 ~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (540)
++.+..+... ......++++|||++|+++.. +++|.+||+.+++. +.
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~--~~----------------------- 145 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY--VE----------------------- 145 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE--EE-----------------------
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE--EE-----------------------
Confidence 9888776532 345778999999999998864 57899999987651 00
Q ss_pred ccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhh-hhcccccEEEEEecC
Q psy18231 310 STKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQA-LKEARDSITSVHVSD 388 (540)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~l~~~~ 388 (540)
. +. .. ....+.+.|
T Consensus 146 ---------------------------------------------------------------~~i~-~~-~~~~v~~~p 160 (361)
T 2oiz_A 146 ---------------------------------------------------------------DVTA-AA-GCWSVIPQP 160 (361)
T ss_dssp ---------------------------------------------------------------EEGG-GT-TEEEEEECT
T ss_pred ---------------------------------------------------------------EEec-CC-CcceeEEcC
Confidence 0 00 00 011122333
Q ss_pred ---CeeEeeeCCCeEEEEeCCC-CceEEee------eC-CceEEEEEecCCcEEEeecCCCeEEEEeccccchh--hhhc
Q psy18231 389 ---HEILTASLDCRIRRYDIRT-GNLVTDY------VG-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELL--EEYK 455 (540)
Q Consensus 389 ---~~l~~~~~dg~i~iwd~~~-~~~~~~~------~~-~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~ 455 (540)
..+++.+.||.+.+|+... ++..... .. .....+.++|++..++..+.++.+.++|+...... ..+.
T Consensus 161 ~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~ 240 (361)
T 2oiz_A 161 NRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWS 240 (361)
T ss_dssp TSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEE
T ss_pred CCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceeccccc
Confidence 4677888899999998865 5444221 11 11123344778877777788899999998654311 1110
Q ss_pred --------cC--cCCcceEEEEecCCCCeEEEeeC-----------CCcEEEEEecCCcceeEEEecccceeeeEEEEcC
Q psy18231 456 --------GH--KSGDFRIECCLDSKDSQIFCGSS-----------DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 514 (540)
Q Consensus 456 --------~~--~~~v~~~~~~~s~~~~~l~s~s~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 514 (540)
.. ......+ +++|+++.++++.. ++.|.+||+.+++.+.++. .+. +.+++|+|
T Consensus 241 ~~~~~~~~~~~~p~g~~~~--a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~--~~~--p~~ia~sp 314 (361)
T 2oiz_A 241 LLNDEDKAKNWVPGGYNLV--GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP--GRD--ALSMTIDQ 314 (361)
T ss_dssp SCCHHHHHTTCEECCSSCE--EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE--CTT--CCEEEEET
T ss_pred ccCccccccccccCCeeEE--EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe--cCC--eeEEEECC
Confidence 00 0111124 78999888777643 3589999999999999998 555 99999999
Q ss_pred CCcEEEeecCCeeEEEEcccc
Q psy18231 515 TRKHIMSACGNNVKLWTAEED 535 (540)
Q Consensus 515 d~~~l~s~~d~~i~iw~~~~~ 535 (540)
||++|+++++++|.+||.+++
T Consensus 315 dg~~l~v~n~~~v~v~D~~t~ 335 (361)
T 2oiz_A 315 QRNLMLTLDGGNVNVYDISQP 335 (361)
T ss_dssp TTTEEEEECSSCEEEEECSSS
T ss_pred CCCEEEEeCCCeEEEEECCCC
Confidence 999999877899999999876
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=1.3e-18 Score=180.14 Aligned_cols=278 Identities=11% Similarity=-0.001 Sum_probs=190.2
Q ss_pred eeeecCeEEEEeCCCCCEEEEe--eCCCcEEEEcCCCCeeEEEeecCCccee---------EEEEe--eCCCe-EEEeeC
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTC--GSDKKIKLWNPYRNLLLKTYGGHAHEVN---------DATAA--CDSSQ-IASGAS 226 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~--~~dg~i~iwd~~~~~~~~~~~~h~~~v~---------~l~~s--p~~~~-l~s~s~ 226 (540)
..|...+..++|++++-++++. +.++...||....+.....+..|...+. ...|+ |||+. |+.++.
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 4577889999999887777776 5688999998655556677777776666 66676 99998 776554
Q ss_pred -CCeEEEEEcC--CCceeEeccc-----cCCceeEEEECCCCCEEEEecCC----------CcEEEEEecC------CCC
Q psy18231 227 -DKSVILWEVT--TGQPVRRWRE-----HASKVTCVKFNEDSSVVISGSQD----------NTVMMWDVKS------RSH 282 (540)
Q Consensus 227 -dg~i~iwd~~--~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~------~~~ 282 (540)
+..|.+|++. .......+.. |...+..++|+|||+.|++++.+ ..|.+||+.+ ++.
T Consensus 100 ~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 179 (662)
T 3azo_A 100 GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV 179 (662)
T ss_dssp TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS
T ss_pred CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce
Confidence 5567777765 2033444555 67788999999999999998876 5788888876 221
Q ss_pred CCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccc
Q psy18231 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVT 362 (540)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (540)
T Consensus 180 -------------------------------------------------------------------------------- 179 (662)
T 3azo_A 180 -------------------------------------------------------------------------------- 179 (662)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccchhhhhh-cccccEEEEEecC--CeeEeeeCC--------CeEEEEeCC-CC---ceEEeee--CCceEEEEEe
Q psy18231 363 PISIHNSCFQALK-EARDSITSVHVSD--HEILTASLD--------CRIRRYDIR-TG---NLVTDYV--GEPIVDACFT 425 (540)
Q Consensus 363 ~~~~~~~~~~~~~-~~~~~v~~l~~~~--~~l~~~~~d--------g~i~iwd~~-~~---~~~~~~~--~~~i~~~~~s 425 (540)
..+. .+...+..++|+| +.|+.++.+ ..|++||+. ++ +...... ...+..+.|+
T Consensus 180 ---------~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 180 ---------RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp ---------EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred ---------eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 0122 2334566778888 667766644 379999999 56 3333333 3578999999
Q ss_pred cCCcEEEeecCCC--eEEEEeccccchhhhhccCcCC--------cceEEEEecCCCCeEEEeeCCCcEEEEEecC-Ccc
Q psy18231 426 RDCQCILTCSTDE--CLRLFDKATGELLEEYKGHKSG--------DFRIECCLDSKDSQIFCGSSDGKIYKWQLVD-SSQ 494 (540)
Q Consensus 426 p~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~--------v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~-~~~ 494 (540)
|||+++++++.++ .|.+||..+++.......+... +..+ +|+++++++++++. +.+++|.+.. +..
T Consensus 251 pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~--~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWF--APLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSE--EECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred CCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceE--eEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 9999888888888 6777777666654333333221 2334 78899999999998 9999995542 233
Q ss_pred eeEEEecccceeeeEE-EEcCCCcEEEeec-CCeeEEEEc
Q psy18231 495 ISTLIHSVGKAVVNSL-CSHPTRKHIMSAC-GNNVKLWTA 532 (540)
Q Consensus 495 ~~~~~~~~~~~~v~~l-~~s~d~~~l~s~~-d~~i~iw~~ 532 (540)
+..+. .|...+..+ +++++.-++++++ +....+|.+
T Consensus 328 ~~~l~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 328 LVDAA--GPWTEWAATLTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp EEECC--SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEEec--CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEE
Confidence 56665 677778877 5554444444455 554445443
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=3.2e-17 Score=150.81 Aligned_cols=246 Identities=10% Similarity=0.172 Sum_probs=175.5
Q ss_pred eeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEee------cCCcceeEEEEe-eCCCeEEEeeC-CCeEEEE
Q psy18231 162 FVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG------GHAHEVNDATAA-CDSSQIASGAS-DKSVILW 233 (540)
Q Consensus 162 ~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~s-p~~~~l~s~s~-dg~i~iw 233 (540)
++.....+++++|+|+++++...++.|.+||.. ++.+..+. +|...+.++++. ++++++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 466789999999999988888889999999976 66666664 244578899995 67766666643 8899999
Q ss_pred EcCCCceeEecc-ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccc
Q psy18231 234 EVTTGQPVRRWR-EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTK 312 (540)
Q Consensus 234 d~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
| .+++.+..+. .+...+..++++++++++++...++.|.+||.....
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~------------------------------- 153 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV------------------------------- 153 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-------------------------------
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCE-------------------------------
Confidence 9 5777766653 344678999999999888877778888888743210
Q ss_pred cccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeE
Q psy18231 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEIL 392 (540)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~ 392 (540)
T Consensus 154 -------------------------------------------------------------------------------- 153 (286)
T 1q7f_A 154 -------------------------------------------------------------------------------- 153 (286)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccC--cCCcceEEEEecC
Q psy18231 393 TASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH--KSGDFRIECCLDS 470 (540)
Q Consensus 393 ~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~ 470 (540)
+..+... + ....+..++++|+|+++++...++.|++||. +++.+..+..+ ......+ ++++
T Consensus 154 -------~~~~~~~-~------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i--~~d~ 216 (286)
T 1q7f_A 154 -------LHKFGCS-K------HLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGV--GINS 216 (286)
T ss_dssp -------EEEEECT-T------TCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEE--EECT
T ss_pred -------EEEeCCC-C------ccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEE--EECC
Confidence 0000000 0 0124677888888887777777888888886 34444444332 2334445 8999
Q ss_pred CCCeEEEeeCCC-cEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEcccccCC
Q psy18231 471 KDSQIFCGSSDG-KIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQ 538 (540)
Q Consensus 471 ~~~~l~s~s~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~~~~~~ 538 (540)
+|+++++...++ .|.+|| .+++.+..+........+.+++++|+|+++++..|++|++|++......
T Consensus 217 ~G~l~v~~~~~~~~i~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 217 NGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp TCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCCCCT
T ss_pred CCCEEEEeCCCCEEEEEEC-CCCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccccccc
Confidence 999888888776 999999 5677777776323334578999999998777744999999998765443
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=7.8e-18 Score=158.70 Aligned_cols=266 Identities=9% Similarity=0.073 Sum_probs=188.1
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEec
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (540)
..|.+++|++++..++..+.++.++.| .++....+..+...+.+++|+|++++++++..++.|.+||..+++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 457788999999888877888999999 45666777777788899999999998888888999999999888766544
Q ss_pred cccCCceeEEEECCCCCEEEEecCC----CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCce
Q psy18231 245 REHASKVTCVKFNEDSSVVISGSQD----NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLL 320 (540)
Q Consensus 245 ~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (540)
..+...+.+++++++++++++...+ +.|.+||..++......
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~---------------------------------- 128 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII---------------------------------- 128 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE----------------------------------
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE----------------------------------
Confidence 4567789999999999888877666 68999988765421000
Q ss_pred eeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-CeeEeeeC---
Q psy18231 321 TKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-HEILTASL--- 396 (540)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~--- 396 (540)
....+...+.++++++ ..++.++.
T Consensus 129 ----------------------------------------------------~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 156 (333)
T 2dg1_A 129 ----------------------------------------------------EDLSTAYCIDDMVFDSKGGFYFTDFRGY 156 (333)
T ss_dssp ----------------------------------------------------CSSSSCCCEEEEEECTTSCEEEEECCCB
T ss_pred ----------------------------------------------------ccCccCCcccceEECCCCCEEEEecccc
Confidence 0001234577888887 44444443
Q ss_pred ----CCeEEEEeCCCCceEEeee-CCceEEEEEecCCcEEE-eecCCCeEEEEeccc-cchhhh--------hccCcCCc
Q psy18231 397 ----DCRIRRYDIRTGNLVTDYV-GEPIVDACFTRDCQCIL-TCSTDECLRLFDKAT-GELLEE--------YKGHKSGD 461 (540)
Q Consensus 397 ----dg~i~iwd~~~~~~~~~~~-~~~i~~~~~sp~~~~l~-~~~~dg~i~i~d~~~-~~~~~~--------~~~~~~~v 461 (540)
.+.|..+|..+++...... ...+..++|+|+++.|+ +.+.++.|.+||..+ +..+.. +.++ ...
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~ 235 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGP 235 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEE
T ss_pred ccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCC
Confidence 3567777776555433222 24578999999998554 455678999999863 332221 1111 123
Q ss_pred ceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecc----cceeeeEEEEcCCCcEEEeec
Q psy18231 462 FRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV----GKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 462 ~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~s~d~~~l~s~~ 523 (540)
..+ +++++|+++++...++.|.+||. +++.+..+..+. |...+.+++|+||++.|+.++
T Consensus 236 ~~i--~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 236 DSC--CIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp EEE--EEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred Cce--EECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEe
Confidence 334 89999998888878899999997 677777775211 112689999999987776655
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=2e-17 Score=155.29 Aligned_cols=253 Identities=12% Similarity=0.108 Sum_probs=182.1
Q ss_pred ecCeEEEEeCCCCCEEEEeeCC------------------------CcEEEEcCCCCeeEEEee-cCCcceeEEEEeeCC
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGSD------------------------KKIKLWNPYRNLLLKTYG-GHAHEVNDATAACDS 218 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~d------------------------g~i~iwd~~~~~~~~~~~-~h~~~v~~l~~sp~~ 218 (540)
.+.+.+++++|+|+++++...+ ++|.+||..+++.+..+. ++-.....++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4779999999999998887766 479999999898877664 445678999999999
Q ss_pred CeEEEeeCCCeEEEEEcCCCc-eeEec---------cccCCceeEEEECC-CCCEEEEec-CCCcEEEEEecCCCCCCcc
Q psy18231 219 SQIASGASDKSVILWEVTTGQ-PVRRW---------REHASKVTCVKFNE-DSSVVISGS-QDNTVMMWDVKSRSHHPIQ 286 (540)
Q Consensus 219 ~~l~s~s~dg~i~iwd~~~~~-~~~~~---------~~h~~~v~~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 286 (540)
+++++...++.|++||..... .+..+ ..+......++++| ++.++++.+ .++.|++|+. +++. ..
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~--~~ 179 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKF--VT 179 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCE--EE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCE--EE
Confidence 999999889999999975442 44444 24455788999999 788777776 5888999983 2220 00
Q ss_pred hhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccccc
Q psy18231 287 VRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI 366 (540)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (540)
T Consensus 180 -------------------------------------------------------------------------------- 179 (329)
T 3fvz_A 180 -------------------------------------------------------------------------------- 179 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecC-CcEEEeecCCCeEEEEec
Q psy18231 367 HNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRD-CQCILTCSTDECLRLFDK 445 (540)
Q Consensus 367 ~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~dg~i~i~d~ 445 (540)
. +...+ .+. ....+ .-.....++++|+ ++++++...++.|++||.
T Consensus 180 ----------------~-------~~~~g-~~~----~~~~~------~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~ 225 (329)
T 3fvz_A 180 ----------------Q-------WGEES-SGS----SPRPG------QFSVPHSLALVPHLDQLCVADRENGRIQCFKT 225 (329)
T ss_dssp ----------------E-------ECEEC-CSS----SCCTT------EESCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ----------------E-------eccCC-CCC----CCCCc------ccCCCcEEEEECCCCEEEEEECCCCEEEEEEC
Confidence 0 00000 000 00000 0024678999998 788888888899999999
Q ss_pred cccchhhhhcc--CcCCcceEEEEecC------CCCeEEEeeCCCcEEEEEecCCcceeEEEe-cccceeeeEEEEcCCC
Q psy18231 446 ATGELLEEYKG--HKSGDFRIECCLDS------KDSQIFCGSSDGKIYKWQLVDSSQISTLIH-SVGKAVVNSLCSHPTR 516 (540)
Q Consensus 446 ~~~~~~~~~~~--~~~~v~~~~~~~s~------~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~ 516 (540)
.+++.+..+.. +...+..+ +++| +|+..++...+..|++||..+++.+..+.. ..+...+..++++|+|
T Consensus 226 ~~G~~~~~~~~~~~~~~~~~~--~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG 303 (329)
T 3fvz_A 226 DTKEFVREIKHASFGRNVFAI--SYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG 303 (329)
T ss_dssp TTCCEEEEECCTTTTTCEEEE--EEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS
T ss_pred CCCcEEEEEeccccCCCccee--eecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC
Confidence 88887776643 33344444 7777 444444445566999999999998888731 1466779999999999
Q ss_pred cEEEeec-CCeeEEEEcccc
Q psy18231 517 KHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 517 ~~l~s~~-d~~i~iw~~~~~ 535 (540)
.++++.. ++.|++|+++..
T Consensus 304 ~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 304 TVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEEESSSCCEEEEEEEEC
T ss_pred CEEEEECCCCEEEEEeCCcc
Confidence 8888877 999999998754
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=1.2e-18 Score=168.11 Aligned_cols=283 Identities=10% Similarity=0.083 Sum_probs=172.8
Q ss_pred EEEcCCCCeeEEEeecCCcceeE-----EEEeeCCCeEEEeeC-CC--eEEEEEcCCCceeEeccccCCceeEEEECCCC
Q psy18231 189 KLWNPYRNLLLKTYGGHAHEVND-----ATAACDSSQIASGAS-DK--SVILWEVTTGQPVRRWREHASKVTCVKFNEDS 260 (540)
Q Consensus 189 ~iwd~~~~~~~~~~~~h~~~v~~-----l~~sp~~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 260 (540)
..+|..++..+..+..|...... .+|+|||++|+.++. ++ .|.+||+.+++......++...+....|+||+
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC
Confidence 34688888888888888766665 889999999998887 66 48888999988877777777666678899999
Q ss_pred CEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeee
Q psy18231 261 SVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVL 340 (540)
Q Consensus 261 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (540)
+.|+.++.++.|.+||+.+++...+.. .. ...... ....
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~--~~------~~~~~~---------------------------------~~~~ 131 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQ--VP------AEWVGY---------------------------------GTWV 131 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEE--CC------TTEEEE---------------------------------EEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeee--ch------hhcccc---------------------------------ccee
Confidence 999999999999999998876311110 00 000000 0000
Q ss_pred eccceeEEEe-ecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeee-CCc
Q psy18231 341 MSTQHLMVLL-DFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYV-GEP 418 (540)
Q Consensus 341 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~ 418 (540)
.+.++...+. ...+.. ..... ... .+ ........+..|.+||+.+++...... ...
T Consensus 132 ~~~dg~~l~~~~~~~~~----~~~~~---~~~-~~--------------~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 189 (388)
T 3pe7_A 132 ANSDCTKLVGIEIRRED----WVPLT---DWK-KF--------------HEFYFTKPCCRLMRVDLKTGESTVILQENQW 189 (388)
T ss_dssp ECTTSSEEEEEEEEGGG----CCCCC---SHH-HH--------------HHHGGGCCCEEEEEEETTTCCEEEEEEESSC
T ss_pred ECCCCCeeccccccCcc----ccccc---ccc-hh--------------hhhhccCCcceEEEEECCCCceEEeecCCcc
Confidence 0111111110 000000 00000 000 00 001123345789999999887654443 356
Q ss_pred eEEEEEec-CCcEEEeecCC------CeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCC-C----cEEE
Q psy18231 419 IVDACFTR-DCQCILTCSTD------ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD-G----KIYK 486 (540)
Q Consensus 419 i~~~~~sp-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~d-g----~i~i 486 (540)
+..+.|+| ||+.|+....+ ..|.++|...++. ..+..+.........+|+|||+.|+..+.+ + .|++
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (388)
T 3pe7_A 190 LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYS 268 (388)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEE
T ss_pred ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEE
Confidence 89999999 99998876653 3788888765543 333333321122334899999987665432 2 3999
Q ss_pred EEecCCcceeEEEeccccee---eeEEEEcCCCcEEEee---------c-CCeeEEEEcccc
Q psy18231 487 WQLVDSSQISTLIHSVGKAV---VNSLCSHPTRKHIMSA---------C-GNNVKLWTAEED 535 (540)
Q Consensus 487 wd~~~~~~~~~~~~~~~~~~---v~~l~~s~d~~~l~s~---------~-d~~i~iw~~~~~ 535 (540)
||+.+++.........+... ...++|+|||+.|+.. . +..|++||++++
T Consensus 269 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 269 ADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp ECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT
T ss_pred EecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 99998875333221121111 2234799999988853 4 678999998764
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.79 E-value=2.3e-17 Score=156.39 Aligned_cols=282 Identities=13% Similarity=0.110 Sum_probs=164.1
Q ss_pred cCeEEEEeCCCCCEEEEee---------CCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCC---C--eE
Q psy18231 165 SGLMHTRFPVDGSYCLTCG---------SDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD---K--SV 230 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~---------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d---g--~i 230 (540)
..+...++ ||++++... .++.|.+||+.+++... + ..+..++|+|||++|+.++.+ + .|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 44566777 888887542 26789999998876533 3 568889999999999987754 3 47
Q ss_pred EEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecc
Q psy18231 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310 (540)
Q Consensus 231 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (540)
.+||+.+++....... .. +..+.|+|||+.|+.++.+. ..... ... +..+.+.
T Consensus 88 ~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~-------~~~~~-~~~-----------------~~~~~~~ 140 (347)
T 2gop_A 88 WVADLETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKR-------REDED-FIF-----------------EDDVPAW 140 (347)
T ss_dssp EEEETTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECC-------CC---------------------------CCCC
T ss_pred EEEECCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccC-------CCcCC-cEE-----------------Eccccee
Confidence 8888888776554433 33 99999999999988876431 00000 000 0000000
Q ss_pred cccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-C
Q psy18231 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-H 389 (540)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~ 389 (540)
..+ ..........+.+++..+.... ..+.. . .+..+.|+| .
T Consensus 141 ~~g-----------------------~~~~~~~~~~l~~~d~~~~~~~-------------~~l~~-~-~~~~~~~spdg 182 (347)
T 2gop_A 141 FDD-----------------------LGFFDGEKTTFWIFDTESEEVI-------------EEFEK-P-RFSSGIWHRDK 182 (347)
T ss_dssp --------------------------------CEEEEEEEETTTTEEE-------------EEEEE-E-TTCEEEEETTE
T ss_pred ecC-----------------------cccccCccceEEEEECCCCeEE-------------eeecC-C-CcccccCCCCe
Confidence 000 0000000111222222111100 01111 1 455677777 4
Q ss_pred eeEeeeCC---------CeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCC--------CeEEEEeccccchhh
Q psy18231 390 EILTASLD---------CRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTD--------ECLRLFDKATGELLE 452 (540)
Q Consensus 390 ~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d--------g~i~i~d~~~~~~~~ 452 (540)
+++++..+ ..|.++| +++......+..+. .++|+|++|+.++.+ ..|.+|| +++...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~ 256 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEKVSFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG 256 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEEESEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE
T ss_pred EEEEEecccccccccccccEEEeC--CCceEEeccCccee--eECCCCCEEEEEEccccCCccccceEEEEC--CCceEe
Confidence 44444333 2355555 45433222222333 349999998877644 4688888 555444
Q ss_pred hhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCee-EEE
Q psy18231 453 EYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNV-KLW 530 (540)
Q Consensus 453 ~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i-~iw 530 (540)
....+...+.. ...|+ |+ ++++++.++.+++| +.+++. ..+. .+...|.+++|+| .++++++ ++.. .||
T Consensus 257 l~~~~~~~~~~-~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~--~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 257 ILDEVDRGVGQ-AKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIA--KGRHWIMGFDVDE--IVVYLKETATRLRELF 327 (347)
T ss_dssp SSTTCCSEEEE-EEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEE--CSSSEEEEEEESS--SEEEEEECSSSCCEEE
T ss_pred ccccCCcccCC-ccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEe--cCCCeEEeeeeeC--cEEEEEcCCCChHHhe
Confidence 44455555543 13788 88 99999999999999 886654 4444 4578899999999 5666665 6554 778
Q ss_pred Ecc
Q psy18231 531 TAE 533 (540)
Q Consensus 531 ~~~ 533 (540)
.++
T Consensus 328 ~~~ 330 (347)
T 2gop_A 328 TWD 330 (347)
T ss_dssp EES
T ss_pred EeC
Confidence 764
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=1.9e-18 Score=180.69 Aligned_cols=236 Identities=6% Similarity=-0.016 Sum_probs=167.4
Q ss_pred CcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCc-----eeEEEECCCCCEEEEecCC---------Cc
Q psy18231 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK-----VTCVKFNEDSSVVISGSQD---------NT 271 (540)
Q Consensus 206 ~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~~~d---------g~ 271 (540)
.....++.|+||+++++++ |++|++||+.+++....+.+|... ...++|||||++|+.++.+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3446689999999988886 899999999999988777776543 2448899999999998876 56
Q ss_pred EEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEee
Q psy18231 272 VMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD 351 (540)
Q Consensus 272 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (540)
+.+||+.+++..
T Consensus 94 ~~~~d~~~~~~~-------------------------------------------------------------------- 105 (740)
T 4a5s_A 94 YDIYDLNKRQLI-------------------------------------------------------------------- 105 (740)
T ss_dssp EEEEETTTTEEC--------------------------------------------------------------------
T ss_pred EEEEECCCCcEE--------------------------------------------------------------------
Confidence 679998877521
Q ss_pred cccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeee-CC--ce-------
Q psy18231 352 FLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYV-GE--PI------- 419 (540)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~--~i------- 419 (540)
.+..+...+...+|+| +.|+.+ .++.|++||+.+++..+... ++ .+
T Consensus 106 ---------------------~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~ 163 (740)
T 4a5s_A 106 ---------------------TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDW 163 (740)
T ss_dssp ---------------------CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCH
T ss_pred ---------------------EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccc
Confidence 2334556788999999 666666 57899999999887554322 21 12
Q ss_pred ----------EEEEEecCCcEEEeecCCC------------------------------------eEEEEeccc---cch
Q psy18231 420 ----------VDACFTRDCQCILTCSTDE------------------------------------CLRLFDKAT---GEL 450 (540)
Q Consensus 420 ----------~~~~~sp~~~~l~~~~~dg------------------------------------~i~i~d~~~---~~~ 450 (540)
..+.|||||+.|+..+.|. .|++||+.+ ++.
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 3489999999998875321 588899888 631
Q ss_pred --hhhhc------cCcCCcceEEEEecCCCCeEEEeeC----CCcEEEEEecCCc------ceeEEEecccceeee----
Q psy18231 451 --LEEYK------GHKSGDFRIECCLDSKDSQIFCGSS----DGKIYKWQLVDSS------QISTLIHSVGKAVVN---- 508 (540)
Q Consensus 451 --~~~~~------~~~~~v~~~~~~~s~~~~~l~s~s~----dg~i~iwd~~~~~------~~~~~~~~~~~~~v~---- 508 (540)
...+. +|...+..+ +|+|||+.++.... +..|++||+.+++ .+..+....|...|.
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~--~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (740)
T 4a5s_A 244 ATSIQITAPASMLIGDHYLCDV--TWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321 (740)
T ss_dssp CCEEEECCCHHHHTSCEEEEEE--EEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSC
T ss_pred ceEEEecCCccCCCCCeEEEEE--EEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcC
Confidence 12222 255555555 89999997665532 3479999999987 223332125665555
Q ss_pred -EEEEcCCCcEEE-eec--CC--eeEEEEcccc
Q psy18231 509 -SLCSHPTRKHIM-SAC--GN--NVKLWTAEED 535 (540)
Q Consensus 509 -~l~~s~d~~~l~-s~~--d~--~i~iw~~~~~ 535 (540)
.++|+|||+.|+ ..+ +| .|.+|+++++
T Consensus 322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 322 SEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp CCCEECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred CCceEcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 789999999877 554 44 6888887654
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=4.4e-17 Score=157.49 Aligned_cols=251 Identities=10% Similarity=-0.032 Sum_probs=164.3
Q ss_pred ceeeeeccccccee--eeeecC-eEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeE------------
Q psy18231 147 WSIRVYRPLTVNRE--LFVLSG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVND------------ 211 (540)
Q Consensus 147 ~~i~~~~~~~~~~~--~~h~~~-v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~------------ 211 (540)
..|.+|+..+.... ..+... ...+.|+|||++|+.++.++.|.+||+.+++.......+......
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 139 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKL 139 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCcc
Confidence 45677776554322 112222 333789999999999998999999999988766655544443222
Q ss_pred -------EEEeeCCCeEEEe-----eCCCeEEEEEcCCCceeEeccccCCceeEEEECC-CCCEEEEecCC------CcE
Q psy18231 212 -------ATAACDSSQIASG-----ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE-DSSVVISGSQD------NTV 272 (540)
Q Consensus 212 -------l~~sp~~~~l~s~-----s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d------g~i 272 (540)
+.|+|+++.++.. ..+..|.+||+.+++..... .+...+..+.|+| +++.|+..+.+ ..|
T Consensus 140 ~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l 218 (396)
T 3c5m_A 140 VGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARM 218 (396)
T ss_dssp EEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCC
T ss_pred ccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceE
Confidence 3456777766554 35678999999888765544 5677899999999 78877766543 357
Q ss_pred EEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeec
Q psy18231 273 MMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352 (540)
Q Consensus 273 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (540)
.+||+..++...+
T Consensus 219 ~~~d~~~~~~~~l------------------------------------------------------------------- 231 (396)
T 3c5m_A 219 WLVNEDGSNVRKI------------------------------------------------------------------- 231 (396)
T ss_dssp EEEETTSCCCEES-------------------------------------------------------------------
T ss_pred EEEECCCCceeEe-------------------------------------------------------------------
Confidence 7777655431000
Q ss_pred ccceecccccccccccchhhhhhcc-cccEEEEEecC--CeeEeeeCC-----CeEEEEeCCCCceEEeeeCCceEEEEE
Q psy18231 353 LGSTQIGDVTPISIHNSCFQALKEA-RDSITSVHVSD--HEILTASLD-----CRIRRYDIRTGNLVTDYVGEPIVDACF 424 (540)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~l~~~~--~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~i~~~~~ 424 (540)
.... ...+..+.|+| +.|+..+.+ +.|++||+.+++........... +.|
T Consensus 232 ---------------------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~ 289 (396)
T 3c5m_A 232 ---------------------KEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLM 289 (396)
T ss_dssp ---------------------SCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEE
T ss_pred ---------------------eccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCc
Confidence 0111 23467788988 556665443 45999999988754433333344 899
Q ss_pred ec-CCcEEEeec----------------CCCeEEEEeccccchhhhhccCcCC-----------cceEEEEecCCCCeEE
Q psy18231 425 TR-DCQCILTCS----------------TDECLRLFDKATGELLEEYKGHKSG-----------DFRIECCLDSKDSQIF 476 (540)
Q Consensus 425 sp-~~~~l~~~~----------------~dg~i~i~d~~~~~~~~~~~~~~~~-----------v~~~~~~~s~~~~~l~ 476 (540)
+| +|+++++++ .+..|++||+.+++. ..+..+... +... +|+|||+.|+
T Consensus 290 s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~--~~s~dg~~l~ 366 (396)
T 3c5m_A 290 SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHP--SFTPNDDGVL 366 (396)
T ss_dssp ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCC--EECTTSSEEE
T ss_pred cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCc--eEccCCCeEE
Confidence 99 999888754 347899999987764 344444431 3334 7999999888
Q ss_pred EeeC-CCcEEEEEec
Q psy18231 477 CGSS-DGKIYKWQLV 490 (540)
Q Consensus 477 s~s~-dg~i~iwd~~ 490 (540)
.++. ++...+|.+.
T Consensus 367 ~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 367 FTSDFEGVPAIYIAD 381 (396)
T ss_dssp EEECTTSSCEEEEEE
T ss_pred EEecCCCCceEEEEE
Confidence 7664 5555555443
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.76 E-value=1.3e-15 Score=143.37 Aligned_cols=250 Identities=12% Similarity=0.062 Sum_probs=171.1
Q ss_pred hcccccceeeeecccccceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCe
Q psy18231 141 YELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ 220 (540)
Q Consensus 141 ~~~~~~~~i~~~~~~~~~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 220 (540)
..+..+..++.|..........+...+.+++|+|+|++++++..++.|.+||..+++.......+...+.+++++|++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l 100 (333)
T 2dg1_A 21 VPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRL 100 (333)
T ss_dssp SCCCCGGGSCEEECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCE
T ss_pred eEEeecccCcccccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcE
Confidence 34466777888844433344456677899999999998888888999999999888766555456788999999999998
Q ss_pred EEEeeCC----CeEEEEEcCCCceeEecc--ccCCceeEEEECCCCCEEEEecC------CCcEEEEEecCCCCCCcchh
Q psy18231 221 IASGASD----KSVILWEVTTGQPVRRWR--EHASKVTCVKFNEDSSVVISGSQ------DNTVMMWDVKSRSHHPIQVR 288 (540)
Q Consensus 221 l~s~s~d----g~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~ 288 (540)
+++...+ +.|.+||..+++....+. .+...+..++++|+++++++... .+.|..+|..+++. .
T Consensus 101 ~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~---~-- 175 (333)
T 2dg1_A 101 FVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV---T-- 175 (333)
T ss_dssp EEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE---E--
T ss_pred EEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE---E--
Confidence 8887766 689999998876543332 34567899999999987776653 23344443332220 0
Q ss_pred hhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccccccc
Q psy18231 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHN 368 (540)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (540)
T Consensus 176 -------------------------------------------------------------------------------- 175 (333)
T 2dg1_A 176 -------------------------------------------------------------------------------- 175 (333)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhhcccccEEEEEecC--Cee-EeeeCCCeEEEEeCCC-CceEEe--------eeC-CceEEEEEecCCcEEEeec
Q psy18231 369 SCFQALKEARDSITSVHVSD--HEI-LTASLDCRIRRYDIRT-GNLVTD--------YVG-EPIVDACFTRDCQCILTCS 435 (540)
Q Consensus 369 ~~~~~~~~~~~~v~~l~~~~--~~l-~~~~~dg~i~iwd~~~-~~~~~~--------~~~-~~i~~~~~sp~~~~l~~~~ 435 (540)
.+......+..+++++ +.+ ++.+.++.|.+||+++ +..+.. +.+ ..+..++++++|+++++..
T Consensus 176 ----~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~ 251 (333)
T 2dg1_A 176 ----PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY 251 (333)
T ss_dssp ----EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE
T ss_pred ----EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEc
Confidence 0001122356788887 344 4445678999999964 332211 112 3678899999999888877
Q ss_pred CCCeEEEEeccccchhhhhccCcC------CcceEEEEecCCCCeEEEeeCCC
Q psy18231 436 TDECLRLFDKATGELLEEYKGHKS------GDFRIECCLDSKDSQIFCGSSDG 482 (540)
Q Consensus 436 ~dg~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~s~~~~~l~s~s~dg 482 (540)
.++.|.+||. +++.+..+..+.. .+..+ +|++|++.|+.++.++
T Consensus 252 ~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~--~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 252 GQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHP--QFIPGTNQLIICSNDI 301 (333)
T ss_dssp TTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEE--EECTTSCEEEEEEECG
T ss_pred CCCEEEEECC-CCCEEEEEEcCCCccccccCcceE--EECCCCCEEEEEeCcc
Confidence 7899999998 4655555543322 45555 7889987777666553
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.75 E-value=5.1e-15 Score=147.50 Aligned_cols=308 Identities=12% Similarity=0.129 Sum_probs=214.3
Q ss_pred hhhhcccccceeeeecccccce--eeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCC--CCeeEEEeecCCcceeEEE
Q psy18231 138 RILYELPKEWSIRVYRPLTVNR--ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPY--RNLLLKTYGGHAHEVNDAT 213 (540)
Q Consensus 138 ~~~~~~~~~~~i~~~~~~~~~~--~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~ 213 (540)
.++.....++.|.+++..+... .+.....+..+.|||||+++++++.|+.|.+||+. +++.+.++... .....++
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia 246 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIE 246 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeE
Confidence 3444556778899999887543 23344567799999999999999999999999995 88888888753 3467899
Q ss_pred Ee----eCCCeEEEeeC-CCeEEEEEcCCCceeEeccc----------cCC-ceeEEEECCCCC-EEEEecCCCcEEEEE
Q psy18231 214 AA----CDSSQIASGAS-DKSVILWEVTTGQPVRRWRE----------HAS-KVTCVKFNEDSS-VVISGSQDNTVMMWD 276 (540)
Q Consensus 214 ~s----p~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~----------h~~-~v~~~~~~~~~~-~l~s~~~dg~i~iwd 276 (540)
|+ |||+++++++. +++|.|+|..+.+.+..+.. |.. .+..+..++++. +++....+|.|.++|
T Consensus 247 ~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd 326 (567)
T 1qks_A 247 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD 326 (567)
T ss_dssp ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred EccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 99 69999887765 58999999999988877542 222 678888888765 455556679999999
Q ss_pred ecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccce
Q psy18231 277 VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
..+.+...+.
T Consensus 327 ~~~~~~~~v~---------------------------------------------------------------------- 336 (567)
T 1qks_A 327 YTDLNNLKTT---------------------------------------------------------------------- 336 (567)
T ss_dssp TTCSSEEEEE----------------------------------------------------------------------
T ss_pred cCCCccceee----------------------------------------------------------------------
Confidence 8654310000
Q ss_pred ecccccccccccchhhhhhcccccEEEEEecC--CeeEee-eCCCeEEEEeCCCCceEEeeeC-----CceEEEE-EecC
Q psy18231 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTA-SLDCRIRRYDIRTGNLVTDYVG-----EPIVDAC-FTRD 427 (540)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~-~~dg~i~iwd~~~~~~~~~~~~-----~~i~~~~-~sp~ 427 (540)
. .........+.|++ ++++++ ..++.|.++|+.+++.+..+.- ++-..+. ++|+
T Consensus 337 ----------------~-i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~ 399 (567)
T 1qks_A 337 ----------------E-ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPT 399 (567)
T ss_dssp ----------------E-EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETT
T ss_pred ----------------e-eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCC
Confidence 0 01112344667877 555554 4688999999999988766643 2212233 5887
Q ss_pred Cc-EEEeec-CCCeEEEEeccc-------cchhhhhccCcCCcceEEEEecCCCCeEEEeeC-------CCcEEEEEecC
Q psy18231 428 CQ-CILTCS-TDECLRLFDKAT-------GELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-------DGKIYKWQLVD 491 (540)
Q Consensus 428 ~~-~l~~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~-------dg~i~iwd~~~ 491 (540)
+. ..+++. .++.|.++|..+ .+.++++......-..+ ..+|++++|.+... .++|.++|+.+
T Consensus 400 ~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i--~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 400 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFI--KTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE--ECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred CCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEE--EeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 54 444443 468999999987 45666666543322234 68999999888663 45999999987
Q ss_pred C-----cce-eEEEe------cccceeeeEEEEcCCCcEEEee--c----CCeeEEEEcccc
Q psy18231 492 S-----SQI-STLIH------SVGKAVVNSLCSHPTRKHIMSA--C----GNNVKLWTAEED 535 (540)
Q Consensus 492 ~-----~~~-~~~~~------~~~~~~v~~l~~s~d~~~l~s~--~----d~~i~iw~~~~~ 535 (540)
. ... ..+.. ......+..+.|+|+|+++..+ + ++.|.++|.++.
T Consensus 478 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 478 MTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp CCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred ccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 7 222 33321 0124578999999999887765 2 589999998764
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.75 E-value=5.2e-16 Score=161.58 Aligned_cols=273 Identities=11% Similarity=0.067 Sum_probs=181.6
Q ss_pred CCCCEEEEeeCC-----CcEEEEcCCCCeeEEEe------ecCCcceeEEEEeeCCCeEEEeeCCC-----eEEEEEcCC
Q psy18231 174 VDGSYCLTCGSD-----KKIKLWNPYRNLLLKTY------GGHAHEVNDATAACDSSQIASGASDK-----SVILWEVTT 237 (540)
Q Consensus 174 pdg~~lat~~~d-----g~i~iwd~~~~~~~~~~------~~h~~~v~~l~~sp~~~~l~s~s~dg-----~i~iwd~~~ 237 (540)
|||++++-...+ +.+.+.+...++....+ .+|...+..++|||||++||.++.++ +|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 788887754322 24455555445433222 13445688999999999998776543 899999999
Q ss_pred CceeEeccccCCceeEEEECCCCCEEEEecCCCc----------------EEEEEecCCCCCCcchhhhhHhhhhcCCce
Q psy18231 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT----------------VMMWDVKSRSHHPIQVRCLNEALKEARDSI 301 (540)
Q Consensus 238 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (540)
++.......+ ..+..++|+|||+.|+.++.++. |++|++.++......
T Consensus 161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~--------------- 224 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL--------------- 224 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE---------------
T ss_pred CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE---------------
Confidence 9876643222 23678999999999999887765 777777655310000
Q ss_pred eEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccE
Q psy18231 302 TSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSI 381 (540)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 381 (540)
+.....+...+
T Consensus 225 ---------------------------------------------------------------------v~~~~~~~~~~ 235 (710)
T 2xdw_A 225 ---------------------------------------------------------------------CAEFPDEPKWM 235 (710)
T ss_dssp ---------------------------------------------------------------------EECCTTCTTCE
T ss_pred ---------------------------------------------------------------------EeccCCCCeEE
Confidence 00111234456
Q ss_pred EEEEecC--CeeEeeeC-----CCeEEEEeCCC------Cc-eEEeeeC--CceEEEEEecCCcEEEeecCC----CeEE
Q psy18231 382 TSVHVSD--HEILTASL-----DCRIRRYDIRT------GN-LVTDYVG--EPIVDACFTRDCQCILTCSTD----ECLR 441 (540)
Q Consensus 382 ~~l~~~~--~~l~~~~~-----dg~i~iwd~~~------~~-~~~~~~~--~~i~~~~~sp~~~~l~~~~~d----g~i~ 441 (540)
..+.|+| ++|+..+. +..|++||+.+ +. ....+.. ..+.. .|+|+|+.|+..+.. +.|.
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~ 314 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLI 314 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEE
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEE
Confidence 7788888 66666554 67899999986 42 2333432 23333 588999887766543 4699
Q ss_pred EEeccccch--hhhhccCcC--CcceEEEEecCCCCeEEEeeCCCc--EEEEEecCCcceeEEEecccceeeeEEEEcCC
Q psy18231 442 LFDKATGEL--LEEYKGHKS--GDFRIECCLDSKDSQIFCGSSDGK--IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 515 (540)
Q Consensus 442 i~d~~~~~~--~~~~~~~~~--~v~~~~~~~s~~~~~l~s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d 515 (540)
+||+.+++. ...+..|.. .+..+ ++++++.++++...|+. |++|++.+++.+..+. .+.+.+..+.++|+
T Consensus 315 ~~d~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~--~~~~~v~~~~~s~d 390 (710)
T 2xdw_A 315 NIDFTDPEESKWKVLVPEHEKDVLEWV--ACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP--LEVGSVVGYSGQKK 390 (710)
T ss_dssp EEETTSCCGGGCEEEECCCSSCEEEEE--EEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC--CCSSEEEEEECCTT
T ss_pred EEeCCCCCcccceeccCCCCCCeEEEE--EEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC--CCCceEEEEecCCC
Confidence 999987642 345555544 33334 67777788888888885 5666766788777777 56788999999999
Q ss_pred CcEEEee--c---CCeeEEEEccccc
Q psy18231 516 RKHIMSA--C---GNNVKLWTAEEDY 536 (540)
Q Consensus 516 ~~~l~s~--~---d~~i~iw~~~~~~ 536 (540)
++.++.. + .++|.+||+.++.
T Consensus 391 ~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 391 DTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 9766532 2 5789999987653
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=1.9e-15 Score=139.69 Aligned_cols=244 Identities=8% Similarity=0.011 Sum_probs=167.7
Q ss_pred CeeEEEeecCCcceeEEEEeeCCC-eEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEE
Q psy18231 196 NLLLKTYGGHAHEVNDATAACDSS-QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 274 (540)
Q Consensus 196 ~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 274 (540)
+..+..+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+...+.+++++++|+++++...++.|.+
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 344455555667788999999998 7888888999999999877 5666677788999999999998888777789999
Q ss_pred EEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeeccc
Q psy18231 275 WDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLG 354 (540)
Q Consensus 275 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (540)
||..+++...... .
T Consensus 95 ~d~~~g~~~~~~~---------------------------------------------------------------~--- 108 (296)
T 3e5z_A 95 QREPGGEWESIAD---------------------------------------------------------------S--- 108 (296)
T ss_dssp ECSTTCCEEEEEC---------------------------------------------------------------E---
T ss_pred EcCCCCcEEEEee---------------------------------------------------------------c---
Confidence 9987665210000 0
Q ss_pred ceecccccccccccchhhhhhcccccEEEEEecC--CeeEe----ee-------------CCCeEEEEeCCCCceEEeee
Q psy18231 355 STQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILT----AS-------------LDCRIRRYDIRTGNLVTDYV 415 (540)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~----~~-------------~dg~i~iwd~~~~~~~~~~~ 415 (540)
........+..+++++ +++++ ++ ..+.|..++.. ++......
T Consensus 109 ------------------~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (296)
T 3e5z_A 109 ------------------FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR 169 (296)
T ss_dssp ------------------ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC
T ss_pred ------------------cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec
Confidence 0000112344566666 34443 22 13466666665 44333222
Q ss_pred C-CceEEEEEecCCcEEEeecCCCeEEEEecc-ccch---hhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEec
Q psy18231 416 G-EPIVDACFTRDCQCILTCSTDECLRLFDKA-TGEL---LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490 (540)
Q Consensus 416 ~-~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~ 490 (540)
. .....++|+|+++.+++.+.++.|++||+. +++. ...+..+......+ +++++|+++++. ++.|.+||..
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i--~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL--RVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE--EEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE--EECCCCCEEEEc--CCeEEEECCC
Confidence 2 457899999999998777888999999986 4443 22222233444556 899999876666 7899999965
Q ss_pred CCcceeEEEecccceeeeEEEE-cCCCcEEEeecCCeeEEEEccc
Q psy18231 491 DSSQISTLIHSVGKAVVNSLCS-HPTRKHIMSACGNNVKLWTAEE 534 (540)
Q Consensus 491 ~~~~~~~~~~~~~~~~v~~l~~-s~d~~~l~s~~d~~i~iw~~~~ 534 (540)
++.+..+. .+.. +++++| +|+++.|++++.+.+.-++.++
T Consensus 246 -g~~~~~~~--~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~ 286 (296)
T 3e5z_A 246 -GDELGRVL--TPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNV 286 (296)
T ss_dssp -SCEEEEEE--CSSC-CCEEEEESTTSCEEEEEETTEEEEEECSC
T ss_pred -CCEEEEEE--CCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccc
Confidence 88888777 5666 999999 6899988888844444444443
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=4.1e-16 Score=146.09 Aligned_cols=261 Identities=10% Similarity=0.069 Sum_probs=182.7
Q ss_pred CCCcEEEEcCCCCeeEEEee------cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEEC
Q psy18231 184 SDKKIKLWNPYRNLLLKTYG------GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257 (540)
Q Consensus 184 ~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~ 257 (540)
.+++|.+||.++++....+. ........+.+. +++.+++...++.|.+||..+++.+..+. .......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 37899999999998765441 112345677774 55666667778999999999999988874 45678899998
Q ss_pred CCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeeccccccee
Q psy18231 258 EDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLS 337 (540)
Q Consensus 258 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (540)
++++..++...++.|.+||+.+++.....
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i--------------------------------------------------- 121 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYI--------------------------------------------------- 121 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEE---------------------------------------------------
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEE---------------------------------------------------
Confidence 88855444447899999998876520000
Q ss_pred eeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeee--CCCeEEEEeCCCCceEEeee
Q psy18231 338 GVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTAS--LDCRIRRYDIRTGNLVTDYV 415 (540)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~ 415 (540)
. .....+.......+++..+.++++. .++.|.++|+.+++.+..+.
T Consensus 122 -------------~-------------------~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 122 -------------E-------------------CPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp -------------E-------------------CTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred -------------E-------------------cCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 0 0000000112234445555555554 48899999999999887776
Q ss_pred C-CceEEEEEecCCcEEEeecCC----------CeEEEEeccccchhhhhccCc-CCcceEEEEecCCCCeEEEeeCCCc
Q psy18231 416 G-EPIVDACFTRDCQCILTCSTD----------ECLRLFDKATGELLEEYKGHK-SGDFRIECCLDSKDSQIFCGSSDGK 483 (540)
Q Consensus 416 ~-~~i~~~~~sp~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~s~~~~~l~s~s~dg~ 483 (540)
. .....++++|+|++++++..+ +.|.++|..+++....+.... .....+ +++|++++|+++.. .
T Consensus 170 ~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~l--a~~~d~~~lyv~~~--~ 245 (328)
T 3dsm_A 170 IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEV--QLNGTRDTLYWINN--D 245 (328)
T ss_dssp CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEE--EECTTSCEEEEESS--S
T ss_pred cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeE--EEecCCCEEEEEcc--E
Confidence 3 456789999999988777655 789999999888776664322 234445 89999999888765 8
Q ss_pred EEEEEecCCcceeEEEecccceeeeEEEEcC-CCcEEEee----c-CCeeEEEEcc
Q psy18231 484 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHP-TRKHIMSA----C-GNNVKLWTAE 533 (540)
Q Consensus 484 i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~~~l~s~----~-d~~i~iw~~~ 533 (540)
|.+||..+++.........+......++++| ++.+.++. . ++.|.+|+.+
T Consensus 246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 9999998887642111112245688999999 56677776 6 8899999987
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.73 E-value=9.1e-17 Score=166.34 Aligned_cols=270 Identities=11% Similarity=0.028 Sum_probs=173.2
Q ss_pred EEEeC--CCCCE-EEEeeC-CCcEEEEcCC--CCeeEEEeec-----CCcceeEEEEeeCCCeEEEeeCC----------
Q psy18231 169 HTRFP--VDGSY-CLTCGS-DKKIKLWNPY--RNLLLKTYGG-----HAHEVNDATAACDSSQIASGASD---------- 227 (540)
Q Consensus 169 ~v~~s--pdg~~-lat~~~-dg~i~iwd~~--~~~~~~~~~~-----h~~~v~~l~~sp~~~~l~s~s~d---------- 227 (540)
...|+ |||++ |+.++. +..|.+|++. .......+.. |...+.+++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 45554 99998 775543 5677777765 2033455655 67789999999999999998877
Q ss_pred CeEEEEEcCC------CceeEecc-ccCCceeEEEECCCCCEEEEecCCC--------cEEEEEec-CCCCCCcchhhhh
Q psy18231 228 KSVILWEVTT------GQPVRRWR-EHASKVTCVKFNEDSSVVISGSQDN--------TVMMWDVK-SRSHHPIQVRCLN 291 (540)
Q Consensus 228 g~i~iwd~~~------~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg--------~i~iwd~~-~~~~~~~~~~~~~ 291 (540)
..|.+||+.+ ++. ..+. .+...+..++|+|||++|+.++.++ .|.+||+. ++.....
T Consensus 161 ~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~------ 233 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT------ 233 (662)
T ss_dssp EEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE------
T ss_pred eEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc------
Confidence 5899999987 544 4555 5667888999999999999877553 79999987 3420000
Q ss_pred HhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchh
Q psy18231 292 EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF 371 (540)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (540)
.
T Consensus 234 -------------------------------------------------------------------------------~ 234 (662)
T 3azo_A 234 -------------------------------------------------------------------------------R 234 (662)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------E
Confidence 0
Q ss_pred hhhhcccccEEEEEecC--CeeEeeeCCC--eEEEEeCCCCceEEeeeCC----------ceEEEEEecCCcEEEeecCC
Q psy18231 372 QALKEARDSITSVHVSD--HEILTASLDC--RIRRYDIRTGNLVTDYVGE----------PIVDACFTRDCQCILTCSTD 437 (540)
Q Consensus 372 ~~~~~~~~~v~~l~~~~--~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~----------~i~~~~~sp~~~~l~~~~~d 437 (540)
.....+...+..+.|+| ++++++..++ .|.+||+.+++.......+ .+..++|+|+++++++++.
T Consensus 235 ~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~- 313 (662)
T 3azo_A 235 TLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK- 313 (662)
T ss_dssp EEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-
T ss_pred EeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-
Confidence 01123456788899998 6666777777 6777777677654433321 1567899999999999998
Q ss_pred CeEEEE--eccccchhhhhccCcCCcceEEEEecCCCCe--EEEeeCCCc--EEEEEecCCcceeEEEecccceeeeEEE
Q psy18231 438 ECLRLF--DKATGELLEEYKGHKSGDFRIECCLDSKDSQ--IFCGSSDGK--IYKWQLVDSSQISTLIHSVGKAVVNSLC 511 (540)
Q Consensus 438 g~i~i~--d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~--l~s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 511 (540)
+.++|| |..+++ +..+..|...+..+ ++++++. +++++.+.. |++||+.+++...... .+...+....
T Consensus 314 ~~~~l~~~d~~~~~-~~~l~~~~~~~~~~---~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~--~~~~~~~~~~ 387 (662)
T 3azo_A 314 GAAVLGILDPESGE-LVDAAGPWTEWAAT---LTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGA--RHTDPVDPAY 387 (662)
T ss_dssp SSCEEEEEETTTTE-EEECCSSCCEEEEE---EEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEES--CCCCSSCGGG
T ss_pred CccEEEEEECCCCc-EEEecCCCCeEEEE---EecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeec--CCcccCCccc
Confidence 999999 555554 56666665544433 1444543 444555544 5555655665433222 3333333334
Q ss_pred EcCCCcEEEeec-CCeeEEEE
Q psy18231 512 SHPTRKHIMSAC-GNNVKLWT 531 (540)
Q Consensus 512 ~s~d~~~l~s~~-d~~i~iw~ 531 (540)
+++...+.+.+. +..|..|-
T Consensus 388 ~~~~~~~~~~~~dg~~i~~~~ 408 (662)
T 3azo_A 388 YPEPQIRTFTAPDGREIHAHI 408 (662)
T ss_dssp SCCCEEEEEECTTSCEEEEEE
T ss_pred cCcceEEEEEcCCCCEEEEEE
Confidence 444444444444 33555554
No 182
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.73 E-value=2.5e-18 Score=158.15 Aligned_cols=110 Identities=25% Similarity=0.405 Sum_probs=98.1
Q ss_pred ecCCceEEeccCCCCCHHHHHHHHHcCCCEEEeeeeecccccccchhhccccccCCCCCCEEEEEecCChhHHHHHHHHh
Q psy18231 13 LLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFVRATQYV 92 (540)
Q Consensus 13 ~~~~~~~~ap~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~ 92 (540)
.+++++++|||+++|++|||++++++|+++++|||+++..+.+..+.....+ .++.+.|+++|++|++|+.++++++..
T Consensus 2 ~l~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~~aa~~a 80 (318)
T 1vhn_A 2 SLEVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAARIL 80 (318)
T ss_dssp ---CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHHHHHHHH
T ss_pred ccCCCEEECCCCCCCcHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999998887776666677 788899999999999999999999987
Q ss_pred cCCCCeEeeccCCCceEEEeccccceecccc
Q psy18231 93 APHCNGVDLNCGCPQRWAIKEGYGCALLSKQ 123 (540)
Q Consensus 93 ~~~~~~id~~~gc~~~~~~~~g~g~~l~~~~ 123 (540)
.+.+|.|++|+|||.......++|+.|+.++
T Consensus 81 ~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~ 111 (318)
T 1vhn_A 81 SEKYKWIDLNAGCPVRKVVKEGAGGALLKDL 111 (318)
T ss_dssp TTTCSEEEEEECCCCHHHHHTTCGGGGGSCH
T ss_pred HHhCCEEEEECCCCcHhcCCCCcccchhhCH
Confidence 7669999999999998888889999999874
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.73 E-value=5.1e-15 Score=147.50 Aligned_cols=279 Identities=10% Similarity=0.086 Sum_probs=192.9
Q ss_pred CCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcC--CCceeEeccccCCce
Q psy18231 174 VDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT--TGQPVRRWREHASKV 251 (540)
Q Consensus 174 pdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~--~~~~~~~~~~h~~~v 251 (540)
|.+.++++...+++|.++|..+++.+.++.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+..+... ...
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCC
Confidence 4455666777899999999999999998874 3456799999999999999999999999995 78887777643 346
Q ss_pred eEEEEC----CCCCEEEEecC-CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEe
Q psy18231 252 TCVKFN----EDSSVVISGSQ-DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFA 326 (540)
Q Consensus 252 ~~~~~~----~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (540)
..++|+ |||+++++++. +++|.++|..+.+..... ..
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i--~~------------------------------------ 284 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ--ST------------------------------------ 284 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE--EC------------------------------------
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE--ec------------------------------------
Confidence 789999 69998887765 589999998776521000 00
Q ss_pred eeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccc-cEEEEEecC---CeeEeeeCCCeEEE
Q psy18231 327 FRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARD-SITSVHVSD---HEILTASLDCRIRR 402 (540)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~l~~~~---~~l~~~~~dg~i~i 402 (540)
..........|.. .+..+..++ ..++....+|.|.+
T Consensus 285 ----------------------------------------~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 285 ----------------------------------------RGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp ----------------------------------------CEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred ----------------------------------------cccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 0000000001111 445555554 45556667899999
Q ss_pred EeCCCCceE--Eeee-CCceEEEEEecCCcEEEeec-CCCeEEEEeccccchhhhhcc-CcCC--cceEEEEecCCCCeE
Q psy18231 403 YDIRTGNLV--TDYV-GEPIVDACFTRDCQCILTCS-TDECLRLFDKATGELLEEYKG-HKSG--DFRIECCLDSKDSQI 475 (540)
Q Consensus 403 wd~~~~~~~--~~~~-~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~~~~--v~~~~~~~s~~~~~l 475 (540)
+|....+.+ ..+. +.....+.|+|+|+++++++ .++.|.++|+.+++.+..+.. ...+ -....+ ++|++..+
T Consensus 325 vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v 403 (567)
T 1qks_A 325 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPV 403 (567)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEE
T ss_pred EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcE
Confidence 999876432 2332 35677899999999887655 578999999999987665543 1111 123332 57875544
Q ss_pred -EEee-CCCcEEEEEecC-------CcceeEEEecccceeeeEEEEcCCCcEEEeec----C----CeeEEEEcccc
Q psy18231 476 -FCGS-SDGKIYKWQLVD-------SSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC----G----NNVKLWTAEED 535 (540)
Q Consensus 476 -~s~s-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~----d----~~i~iw~~~~~ 535 (540)
+++. .+++|.++|..+ .+.++++. .....-..+..+|++++|.+.. | ++|.++|+.+.
T Consensus 404 ~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~--~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 404 WATSHMGDDSVALIGTDPEGHPDNAWKILDSFP--ALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE--CSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEeCCCCCCeEEEecCCCCCCccccCEEEEEEe--cCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 4443 568999999887 56777777 3333334577899999888755 2 49999998765
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.73 E-value=3.9e-16 Score=161.99 Aligned_cols=271 Identities=7% Similarity=-0.023 Sum_probs=177.6
Q ss_pred CCCCCEEEEeeCCC-----cEEEEcCCCCeeEEEee------cCCcceeEEEEeeCCCeEE-----EeeCCCeEEEEEcC
Q psy18231 173 PVDGSYCLTCGSDK-----KIKLWNPYRNLLLKTYG------GHAHEVNDATAACDSSQIA-----SGASDKSVILWEVT 236 (540)
Q Consensus 173 spdg~~lat~~~dg-----~i~iwd~~~~~~~~~~~------~h~~~v~~l~~sp~~~~l~-----s~s~dg~i~iwd~~ 236 (540)
+|+|++++....++ .+.+.+...++....+. +|...+.+++|||||++|| .|+.+.+|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47888888655433 24444544444333332 4556799999999999998 45556789999999
Q ss_pred CCceeEeccccCCce--eEEEECCCCCEEEEecCCCc-------------EEEEEecCCCCCCcchhhhhHhhhhcCCce
Q psy18231 237 TGQPVRRWREHASKV--TCVKFNEDSSVVISGSQDNT-------------VMMWDVKSRSHHPIQVRCLNEALKEARDSI 301 (540)
Q Consensus 237 ~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~~dg~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (540)
+++.+. ..+...+ ..++|+|||+.|+.++.|.. |++|++.++......
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~l--------------- 218 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTV--------------- 218 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEE---------------
T ss_pred CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceE---------------
Confidence 998651 1122222 68999999999999988765 888888765421000
Q ss_pred eEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccE
Q psy18231 302 TSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSI 381 (540)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 381 (540)
+.....+...+
T Consensus 219 ---------------------------------------------------------------------v~~~~~~~~~~ 229 (695)
T 2bkl_A 219 ---------------------------------------------------------------------VHERTGDPTTF 229 (695)
T ss_dssp ---------------------------------------------------------------------EECCCCCTTCE
T ss_pred ---------------------------------------------------------------------EEecCCCCEEE
Confidence 00122344567
Q ss_pred EEEEecC--CeeEeeeCCC----eEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEeec---CCCeEEEEeccccch-
Q psy18231 382 TSVHVSD--HEILTASLDC----RIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTCS---TDECLRLFDKATGEL- 450 (540)
Q Consensus 382 ~~l~~~~--~~l~~~~~dg----~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~---~dg~i~i~d~~~~~~- 450 (540)
.++.++| ++++.++.++ .|++||..+++....... ..+....+ ++|.+++... .++.|.+||+.+++.
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~ 308 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARA 308 (695)
T ss_dssp EEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGG
T ss_pred EEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 7888988 6677766555 677787766554333322 34555555 6666444433 258899999987753
Q ss_pred -hhhhccCc--CCcceEEEEecCCCCeEEEeeCCCcEEEEEec-CCcceeEEEeccc-ceeeeEEEEcCCCcEEE----e
Q psy18231 451 -LEEYKGHK--SGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV-DSSQISTLIHSVG-KAVVNSLCSHPTRKHIM----S 521 (540)
Q Consensus 451 -~~~~~~~~--~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~-~~~v~~l~~s~d~~~l~----s 521 (540)
...+..+. ..+..+ +++ ++.++++...|+..++|.+. +++....+. .+ .+.+..++++|+++.|+ +
T Consensus 309 ~~~~l~~~~~~~~l~~~--~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~--~~~~~~v~~~~~s~d~~~l~~~~ss 383 (695)
T 2bkl_A 309 SWKEIVPEDSSASLLSV--SIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQ--LPGVGAASNLMGLEDLDDAYYVFTS 383 (695)
T ss_dssp GCEEEECCCSSCEEEEE--EEE-TTEEEEEEEETTEEEEEEEETTCCEEEECC--CSSSSEECCCBSCTTCSEEEEEEEE
T ss_pred CCeEEecCCCCCeEEEE--EEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEec--CCCCeEEEEeecCCCCCEEEEEEcC
Confidence 23343333 234334 566 67788999999999888776 466555554 33 67788999999998776 3
Q ss_pred ec-CCeeEEEEcccc
Q psy18231 522 AC-GNNVKLWTAEED 535 (540)
Q Consensus 522 ~~-d~~i~iw~~~~~ 535 (540)
.. .++|++||+.++
T Consensus 384 ~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 384 FTTPRQIYKTSVSTG 398 (695)
T ss_dssp TTEEEEEEEEETTTC
T ss_pred CCCCCEEEEEECCCC
Confidence 33 579999998764
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.73 E-value=3.7e-14 Score=131.12 Aligned_cols=275 Identities=11% Similarity=0.009 Sum_probs=190.4
Q ss_pred ecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEE-eecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCcee-
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPV- 241 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~- 241 (540)
...+.+++++++|+++++...++.|.+||.. ++.... +..+...+.++++.+++.++++...++.|..||.. ++..
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~ 91 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKE 91 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEE
Confidence 3578999999999987776668899999987 544322 22345778999999999988887778899999976 4332
Q ss_pred EeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCcee
Q psy18231 242 RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLT 321 (540)
Q Consensus 242 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (540)
..+......+..+++.+++.++++...++.|..||. +++....
T Consensus 92 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~------------------------------------ 134 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREY------------------------------------ 134 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE------------------------------------
T ss_pred EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEe------------------------------------
Confidence 222234567899999999988887777888999987 4331000
Q ss_pred eEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCe
Q psy18231 322 KLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCR 399 (540)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~ 399 (540)
........+..+++++ ...++...++.
T Consensus 135 ---------------------------------------------------~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 135 ---------------------------------------------------ELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp ---------------------------------------------------ECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred ---------------------------------------------------cCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 0011223567788887 44444555789
Q ss_pred EEEEeCCCCceEEe-ee--CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhh-hccCcCCcceEEEEecCCCCeE
Q psy18231 400 IRRYDIRTGNLVTD-YV--GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEE-YKGHKSGDFRIECCLDSKDSQI 475 (540)
Q Consensus 400 i~iwd~~~~~~~~~-~~--~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~~~~~l 475 (540)
|..||. +++.... .. ...+..++++++|+++++...++.|.+||. +++.... ...+...+..+ +++++|+++
T Consensus 164 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i--~~~~~g~l~ 239 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAI--TAGAGIDLW 239 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEE--EECSTTCEE
T ss_pred EEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeE--EECCCCCEE
Confidence 999999 6655432 22 246889999999998877777889999998 6653321 22223344445 889999877
Q ss_pred EEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEcccc
Q psy18231 476 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED 535 (540)
Q Consensus 476 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~~~ 535 (540)
++...++.|..||. +++ +..+....+...+.++++ +++.+.++...+.|..++.+++
T Consensus 240 v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 240 FTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp EEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred EeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 76667889999997 453 344433245567899999 8998887766566777776553
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=1.6e-15 Score=157.84 Aligned_cols=240 Identities=18% Similarity=0.124 Sum_probs=164.5
Q ss_pred eecCeEEEEeCCCCCEEEEeeCCC-----cEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCe--------
Q psy18231 163 VLSGLMHTRFPVDGSYCLTCGSDK-----KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS-------- 229 (540)
Q Consensus 163 h~~~v~~v~~spdg~~lat~~~dg-----~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~-------- 229 (540)
|...+..++|||||++||.++.++ +|++||+.+++.+.....+ ..+.+++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 444688999999999999765433 8999999999877643322 23678999999999999888766
Q ss_pred --------EEEEEcCCCce----eEeccccCCceeEEEECCCCCEEEEecC-----CCcEEEEEecC------CCCCCcc
Q psy18231 230 --------VILWEVTTGQP----VRRWREHASKVTCVKFNEDSSVVISGSQ-----DNTVMMWDVKS------RSHHPIQ 286 (540)
Q Consensus 230 --------i~iwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~------~~~~~~~ 286 (540)
|.+|++.+++. +.....|...+..+.|+|||++|+.++. +..|.+||+.+ +.... .
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~-~ 280 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW-V 280 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC-E
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce-E
Confidence 99999988762 2223335666889999999999887764 56899999876 32000 0
Q ss_pred hhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccccc
Q psy18231 287 VRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI 366 (540)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (540)
T Consensus 281 -------------------------------------------------------------------------------- 280 (710)
T 2xdw_A 281 -------------------------------------------------------------------------------- 280 (710)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhcccccEEEEEecC--CeeEeeeC----CCeEEEEeCCCCce--EEeee-C---CceEEEEEecCCcEEEee
Q psy18231 367 HNSCFQALKEARDSITSVHVSD--HEILTASL----DCRIRRYDIRTGNL--VTDYV-G---EPIVDACFTRDCQCILTC 434 (540)
Q Consensus 367 ~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~----dg~i~iwd~~~~~~--~~~~~-~---~~i~~~~~sp~~~~l~~~ 434 (540)
.+..+...+.. .+++ +.++..+. .+.|.+||+.++.. ...+. . ..+..++|++++.++++.
T Consensus 281 ------~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 281 ------KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp ------EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred ------EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE
Confidence 11111222222 1332 44444433 34799999987641 22332 2 257889999888888888
Q ss_pred cCCCe--EEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEe----eCCCcEEEEEecCCc
Q psy18231 435 STDEC--LRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCG----SSDGKIYKWQLVDSS 493 (540)
Q Consensus 435 ~~dg~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~----s~dg~i~iwd~~~~~ 493 (540)
..++. |++||+.+++.+..+..+...+..+ +++|+++.++.. ...++|+.||+.+++
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~--~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFPLEVGSVVGY--SGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEECCCSSEEEEE--ECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EECCEEEEEEEECCCCCEEEecCCCCceEEEE--ecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 88885 5667776777666777665544444 788988766533 245789999998877
No 187
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.72 E-value=2.6e-18 Score=159.31 Aligned_cols=109 Identities=24% Similarity=0.440 Sum_probs=96.6
Q ss_pred ecCCceEEeccCCCCCHHHHHHHHHcCC-CEEEeeeeecccccccchhhccccccCCCCCCEEEEEecCChhHHHHHHHH
Q psy18231 13 LLKNLKHCDSTLWTSKLNFRQLVRSHNV-DLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFVRATQY 91 (540)
Q Consensus 13 ~~~~~~~~ap~~~~~~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~ 91 (540)
++++++++|||+|+|+++||.+++++|+ +++||||+++..++++.+.. .+..++++.|+++|++|++|+.++++++.
T Consensus 1 ~l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~--~~~~~~~~~p~~vQL~g~~p~~~~~aA~~ 78 (350)
T 3b0p_A 1 MLDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRER--LLAFRPEEHPIALQLAGSDPKSLAEAARI 78 (350)
T ss_dssp -CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHH--HHCCCGGGCSEEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHH--HhccCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 4789999999999999999999999986 99999999999988766643 33457889999999999999999999998
Q ss_pred hcC-CCCeEeeccCCCceEEEeccccceecccc
Q psy18231 92 VAP-HCNGVDLNCGCPQRWAIKEGYGCALLSKQ 123 (540)
Q Consensus 92 ~~~-~~~~id~~~gc~~~~~~~~g~g~~l~~~~ 123 (540)
+.+ ++|.|++|+|||......+++|++|+.++
T Consensus 79 a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~ 111 (350)
T 3b0p_A 79 GEAFGYDEINLNLGCPSEKAQEGGYGACLLLDL 111 (350)
T ss_dssp HHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCH
T ss_pred HHHcCCCEEEECCcCCCCcCcCCCcchhHHhCH
Confidence 765 79999999999999888899999998774
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.72 E-value=2.7e-14 Score=135.47 Aligned_cols=267 Identities=9% Similarity=0.002 Sum_probs=183.2
Q ss_pred EeCCCCCEEEEeeC--CC---cEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEee----------CCCeEEEEEc
Q psy18231 171 RFPVDGSYCLTCGS--DK---KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA----------SDKSVILWEV 235 (540)
Q Consensus 171 ~~spdg~~lat~~~--dg---~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s----------~dg~i~iwd~ 235 (540)
...|+++++++... .. +|.++|..+++.+.++.....+ .++++||+++|+.+. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34578888777653 22 8899999999998888754444 899999999998886 3678999999
Q ss_pred CCCceeEecccc-------CCceeEEEECCCCCEEEEecC--CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEE
Q psy18231 236 TTGQPVRRWREH-------ASKVTCVKFNEDSSVVISGSQ--DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHS 306 (540)
Q Consensus 236 ~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (540)
.+.+.+..+.-. ......+.|+|||++|+.+.. +++|.++| .+++.. .
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~--~-------------------- 161 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD--D-------------------- 161 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE--e--------------------
Confidence 998887765421 133568999999999998874 47899999 877520 0
Q ss_pred eecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhh-hhcccccEEEEE
Q psy18231 307 LVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQA-LKEARDSITSVH 385 (540)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~l~ 385 (540)
. + .....+.-..
T Consensus 162 ------------------------------------------------------------------~~i-~~~~~~~~~~ 174 (373)
T 2mad_H 162 ------------------------------------------------------------------QLL-SSPTCYHIHP 174 (373)
T ss_pred ------------------------------------------------------------------EEc-CCCceEEEEe
Confidence 0 0 0001111111
Q ss_pred ecCCeeEeeeCCCeEEEEeCCCCceEEeee------C-Cc-eEEEEEecCCcEEEeecCCCeEEEEeccccc--hhhhhc
Q psy18231 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYV------G-EP-IVDACFTRDCQCILTCSTDECLRLFDKATGE--LLEEYK 455 (540)
Q Consensus 386 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~-~~-i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~ 455 (540)
..+..+++.+.||.+.++|. +++...... + .+ .....+.+++..++..+.++.+.+.|+.... .+..+.
T Consensus 175 ~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~ 253 (373)
T 2mad_H 175 GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPID 253 (373)
T ss_pred CCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeee
Confidence 22255677778999999999 777663322 1 12 1234667766555555578899999986542 222221
Q ss_pred cC----------cCCcceEEEEecCCCCeEEEeeC----------CCcEEEEEecCCcceeEEEecccceeeeEEEEcCC
Q psy18231 456 GH----------KSGDFRIECCLDSKDSQIFCGSS----------DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 515 (540)
Q Consensus 456 ~~----------~~~v~~~~~~~s~~~~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d 515 (540)
.. ......+ +++++++.++.+.. ++.|.++|..+++.+.++.. .....+++|+||
T Consensus 254 ~~~~~~~~~~~~p~g~~~~--~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~---g~~p~~i~~s~D 328 (373)
T 2mad_H 254 ALSGGRKADTWRPGGWQQV--AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL---GHDVDAISVAQD 328 (373)
T ss_pred ecCCcccccceecCceEeE--EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC---CCCcCeEEECCC
Confidence 11 1111123 78999998777653 35799999999999999873 235899999999
Q ss_pred Cc-EEEeec--CCeeEEEEcccc
Q psy18231 516 RK-HIMSAC--GNNVKLWTAEED 535 (540)
Q Consensus 516 ~~-~l~s~~--d~~i~iw~~~~~ 535 (540)
|+ +++++. ++.|.+||+.++
T Consensus 329 g~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 329 GGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred CCeEEEEEcCCCCeEEEEECCCC
Confidence 99 677765 899999999765
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=1.7e-16 Score=164.75 Aligned_cols=237 Identities=9% Similarity=-0.024 Sum_probs=159.1
Q ss_pred eecCeEEEEeCCCCCEEE-----EeeCCCcEEEEcCCCCeeEEEeecCCcce--eEEEEeeCCCeEEEeeCCCe------
Q psy18231 163 VLSGLMHTRFPVDGSYCL-----TCGSDKKIKLWNPYRNLLLKTYGGHAHEV--NDATAACDSSQIASGASDKS------ 229 (540)
Q Consensus 163 h~~~v~~v~~spdg~~la-----t~~~dg~i~iwd~~~~~~~~~~~~h~~~v--~~l~~sp~~~~l~s~s~dg~------ 229 (540)
|...+..++|||||++|| .|+.+.+|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 455789999999999999 44445789999999988641 1122223 68999999999999988776
Q ss_pred -------EEEEEcCCCc----eeEeccccCCceeEEEECCCCCEEEEecCCC----cEEEEEecCCCCCCcchhhhhHhh
Q psy18231 230 -------VILWEVTTGQ----PVRRWREHASKVTCVKFNEDSSVVISGSQDN----TVMMWDVKSRSHHPIQVRCLNEAL 294 (540)
Q Consensus 230 -------i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~ 294 (540)
|++|++.+++ .+.....|...+..+.|+|||++|+.++.++ .|.+|+..+++. .
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~--~--------- 265 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF--R--------- 265 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC--E---------
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce--E---------
Confidence 9999998876 3334445667889999999999988877665 455554332221 0
Q ss_pred hhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhh
Q psy18231 295 KEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL 374 (540)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (540)
.+
T Consensus 266 ------------------------------------------------------------------------------~l 267 (695)
T 2bkl_A 266 ------------------------------------------------------------------------------LL 267 (695)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------Ee
Confidence 11
Q ss_pred hcccccEEEEEecC-CeeEeee----CCCeEEEEeCCCCce---EEeee---CCceEEEEEecCCcEEEeecCCCeEEEE
Q psy18231 375 KEARDSITSVHVSD-HEILTAS----LDCRIRRYDIRTGNL---VTDYV---GEPIVDACFTRDCQCILTCSTDECLRLF 443 (540)
Q Consensus 375 ~~~~~~v~~l~~~~-~~l~~~~----~dg~i~iwd~~~~~~---~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~i~ 443 (540)
..+...+....+++ + ++..+ .++.|.+||+.+++. ...+. ...+..++++ ++.++++...|+..+||
T Consensus 268 ~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 268 VKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVR 345 (695)
T ss_dssp EECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred ecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence 11222223333333 4 44333 358899999987652 22222 2357888888 77888889999988888
Q ss_pred ecc-ccchhhhhccC-cCCcceEEEEecCCCCeEE----EeeCCCcEEEEEecCCcc
Q psy18231 444 DKA-TGELLEEYKGH-KSGDFRIECCLDSKDSQIF----CGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 444 d~~-~~~~~~~~~~~-~~~v~~~~~~~s~~~~~l~----s~s~dg~i~iwd~~~~~~ 494 (540)
.+. +++.+..+..+ ...+..+ +++++++.++ +....++|++||+.+++.
T Consensus 346 ~~~~~g~~~~~l~~~~~~~v~~~--~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 346 VATLKGKPVRTVQLPGVGAASNL--MGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEETTCCEEEECCCSSSSEECCC--BSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEeCCCCeeEEecCCCCeEEEEe--ecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 654 35444555444 3444444 7889988766 333457899999988763
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=2e-15 Score=137.04 Aligned_cols=250 Identities=10% Similarity=0.172 Sum_probs=178.4
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCeeEEEeecCC-cceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEecccc-CCcee
Q psy18231 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA-HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREH-ASKVT 252 (540)
Q Consensus 175 dg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h-~~~v~ 252 (540)
.+++|++++.++.|.+||.++++.+.++..+. ..+.++.++|+|++|+ +.++.|..||. +++.+..+..+ ...+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 45789999999999999999999999998776 5789999999999888 45788999998 89999888765 35788
Q ss_pred EEEECCCCCEEEEecC-CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecc
Q psy18231 253 CVKFNEDSSVVISGSQ-DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKY 331 (540)
Q Consensus 253 ~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (540)
++.+.++|+++++.+. ++.|..+|. +++. +.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~--l~--------------------------------------------- 112 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEV--LS--------------------------------------------- 112 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCE--EE---------------------------------------------
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCE--EE---------------------------------------------
Confidence 9999999999998876 666666664 3331 00
Q ss_pred cccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCc
Q psy18231 332 LNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGN 409 (540)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~ 409 (540)
-+...+ ....+......+++.+ +++++...++.|..||.+ ++
T Consensus 113 -----------------~~~~~~------------------~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 113 -----------------KTEFET------------------GIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp -----------------EEEECC------------------SCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred -----------------EEeccC------------------CCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 000000 0000001122233444 788888899999999998 99
Q ss_pred eEEeeeC-CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCC----cceEEEEecCCCCeEEEeeCC---
Q psy18231 410 LVTDYVG-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG----DFRIECCLDSKDSQIFCGSSD--- 481 (540)
Q Consensus 410 ~~~~~~~-~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----v~~~~~~~s~~~~~l~s~s~d--- 481 (540)
.+.++.. ....++...++|+.+++++.++.|..+|..+++.+.++..+... ......+..++|..+++....
T Consensus 157 ~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~ 236 (276)
T 3no2_A 157 LLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDR 236 (276)
T ss_dssp EEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCT
T ss_pred EEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccc
Confidence 9888875 45677888999999999998999999999999988777543211 112233677889888776421
Q ss_pred -----CcEEEEEe-cCCcceeEEEecccceeeeEEE
Q psy18231 482 -----GKIYKWQL-VDSSQISTLIHSVGKAVVNSLC 511 (540)
Q Consensus 482 -----g~i~iwd~-~~~~~~~~~~~~~~~~~v~~l~ 511 (540)
+..+++++ .+++.+-++.....-+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~ 272 (276)
T 3no2_A 237 EAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTIC 272 (276)
T ss_dssp TGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEEE
T ss_pred cccccCCceEEEECCCCCEEEEecCcccccceeeee
Confidence 23456666 5777777776444445565554
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.71 E-value=2.4e-15 Score=142.51 Aligned_cols=245 Identities=11% Similarity=0.089 Sum_probs=160.7
Q ss_pred cceeeeecccccceeeeeecCeEEEEeCCCCCEEEEeeCC---C--cEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCe
Q psy18231 146 EWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSD---K--KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ 220 (540)
Q Consensus 146 ~~~i~~~~~~~~~~~~~h~~~v~~v~~spdg~~lat~~~d---g--~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 220 (540)
+..|.+|+......... ..+..++|||||++||..+.+ + .|.+||+.+++.......+ . +..++|+|||+.
T Consensus 42 ~~~l~~~d~~~~~~~~l--~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~ 117 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI--ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRK 117 (347)
T ss_dssp EEEEEEEETTTCCEEEE--ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSE
T ss_pred cceEEEEeCCCCceEEc--ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCE
Confidence 55677887766542222 678999999999999977653 3 4888898888766555433 4 999999999999
Q ss_pred EEEeeCC---------------------------CeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCC---
Q psy18231 221 IASGASD---------------------------KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--- 270 (540)
Q Consensus 221 l~s~s~d---------------------------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--- 270 (540)
|+.++.+ ..|.+||+.+++.+..+.. . .+..+.|+||| ++++++.++
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~ 194 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIP 194 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSC
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccc
Confidence 9887642 5799999988877455544 3 78899999999 777776542
Q ss_pred ----cEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeecccee
Q psy18231 271 ----TVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHL 346 (540)
Q Consensus 271 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (540)
...+|.+.+++. .
T Consensus 195 ~~~~~~~l~~~d~~~~---~------------------------------------------------------------ 211 (347)
T 2gop_A 195 QYFKFWDIYIWEDGKE---E------------------------------------------------------------ 211 (347)
T ss_dssp CSSCCEEEEEEETTEE---E------------------------------------------------------------
T ss_pred cccccccEEEeCCCce---E------------------------------------------------------------
Confidence 345555442210 0
Q ss_pred EEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCC--------CeEEEEeCCCCceEEeeeC--
Q psy18231 347 MVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLD--------CRIRRYDIRTGNLVTDYVG-- 416 (540)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~-- 416 (540)
.+..+ ..+..+..+.+.++.++.+ ..|.+|| +++......+
T Consensus 212 --------------------------~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~ 262 (347)
T 2gop_A 212 --------------------------KMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVD 262 (347)
T ss_dssp --------------------------EEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCC
T ss_pred --------------------------EeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCC
Confidence 01111 2223332222556555533 4688888 5554433333
Q ss_pred CceEE-EEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcE-EEEEecCCcc
Q psy18231 417 EPIVD-ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI-YKWQLVDSSQ 494 (540)
Q Consensus 417 ~~i~~-~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i-~iwd~~~~~~ 494 (540)
..+.. +.|+ ++ ++++++.++.++|| +.+++.. .+..+...+..+ ++++ .++++++.++.. .+|.+. ++
T Consensus 263 ~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~--~~s~--~~~~~~~~~~~~~~l~~~~-g~- 332 (347)
T 2gop_A 263 RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGF--DVDE--IVVYLKETATRLRELFTWD-GE- 332 (347)
T ss_dssp SEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEE--EESS--SEEEEEECSSSCCEEEEES-SS-
T ss_pred cccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEee--eeeC--cEEEEEcCCCChHHheEeC-Cc-
Confidence 45775 8999 88 88899999999999 8765543 333345555555 7888 677777777765 778776 43
Q ss_pred eeEEE
Q psy18231 495 ISTLI 499 (540)
Q Consensus 495 ~~~~~ 499 (540)
...+.
T Consensus 333 ~~~lt 337 (347)
T 2gop_A 333 EKQLT 337 (347)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 34444
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=6.5e-15 Score=136.07 Aligned_cols=235 Identities=9% Similarity=0.051 Sum_probs=165.4
Q ss_pred eecCeEEEEeCCCCC-EEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCcee
Q psy18231 163 VLSGLMHTRFPVDGS-YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPV 241 (540)
Q Consensus 163 h~~~v~~v~~spdg~-~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 241 (540)
+.....+++|+|+|+ +++++..++.|..||..++ ...+..+...+.+++++|+|+++++...++.|.+||..+++..
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 445678999999998 6778888999999998877 5667777888999999999998888877899999999888765
Q ss_pred Eecccc----CCceeEEEECCCCCEEEEecCCC---------------cEEEEEecCCCCCCcchhhhhHhhhhcCCcee
Q psy18231 242 RRWREH----ASKVTCVKFNEDSSVVISGSQDN---------------TVMMWDVKSRSHHPIQVRCLNEALKEARDSIT 302 (540)
Q Consensus 242 ~~~~~h----~~~v~~~~~~~~~~~l~s~~~dg---------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (540)
...... ...+..++++|+|+++++.+..| .-.+|.+..... ..
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~---------------- 165 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT--LS---------------- 165 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC--EE----------------
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC--EE----------------
Confidence 433221 23567899999999888732111 113333322110 00
Q ss_pred EEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEE
Q psy18231 303 SVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSIT 382 (540)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 382 (540)
.+..+.....
T Consensus 166 ----------------------------------------------------------------------~~~~~~~~~~ 175 (296)
T 3e5z_A 166 ----------------------------------------------------------------------APIRDRVKPN 175 (296)
T ss_dssp ----------------------------------------------------------------------EEECCCSSEE
T ss_pred ----------------------------------------------------------------------EeecCCCCCc
Confidence 1112234457
Q ss_pred EEEecC--CeeEeeeCCCeEEEEeCC-CCce---EEee--eCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhh
Q psy18231 383 SVHVSD--HEILTASLDCRIRRYDIR-TGNL---VTDY--VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 454 (540)
Q Consensus 383 ~l~~~~--~~l~~~~~dg~i~iwd~~-~~~~---~~~~--~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 454 (540)
.++|+| +.+++.+.++.|.+||+. +++. ...+ ....+..++++++|+++++. ++.|.+||.. ++.+..+
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEE
Confidence 788988 556667778999999997 4544 2233 22456789999999977666 7899999986 7777777
Q ss_pred ccCcCCcceEEEEe-cCCCCeEEEeeCCCcEEEEEecCCcc
Q psy18231 455 KGHKSGDFRIECCL-DSKDSQIFCGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 455 ~~~~~~v~~~~~~~-s~~~~~l~s~s~dg~i~iwd~~~~~~ 494 (540)
..+.. +..+ +| +++++.|++++.++ +.-++..+.+.
T Consensus 253 ~~~~~-~~~~--~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 253 LTPQT-TSNL--CFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp ECSSC-CCEE--EEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred ECCCC-ceeE--EEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 77766 6666 67 68999899888764 44555554443
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=2.6e-14 Score=133.73 Aligned_cols=267 Identities=9% Similarity=0.027 Sum_probs=176.6
Q ss_pred ccceeeeecccccceee---------eeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEe
Q psy18231 145 KEWSIRVYRPLTVNREL---------FVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 215 (540)
Q Consensus 145 ~~~~i~~~~~~~~~~~~---------~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 215 (540)
.+.+|.++++.+..... ........+.+. +++..++...++.|.+||..+++.+.++. .......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 35566677666543211 111335667774 34455555667999999999999999886 35678899999
Q ss_pred eCCCeEEEeeCCCeEEEEEcCCCceeEeccccC-----CceeEEEECCCCCEEEEec--CCCcEEEEEecCCCCCCcchh
Q psy18231 216 CDSSQIASGASDKSVILWEVTTGQPVRRWREHA-----SKVTCVKFNEDSSVVISGS--QDNTVMMWDVKSRSHHPIQVR 288 (540)
Q Consensus 216 p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~ 288 (540)
++++.+++...++.|.+||..+++....+.... .....+++ ++..++.+. .++.|.++|+.+++.....
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i-- 168 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDEL-- 168 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEE--
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEE--
Confidence 998655555488999999999998776665322 14566777 344455544 4889999999876520000
Q ss_pred hhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccccccc
Q psy18231 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHN 368 (540)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (540)
T Consensus 169 -------------------------------------------------------------------------------- 168 (328)
T 3dsm_A 169 -------------------------------------------------------------------------------- 168 (328)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhhcccccEEEEEecC-CeeE-eeeCC----------CeEEEEeCCCCceEEeee---CCceEEEEEecCCcEEEe
Q psy18231 369 SCFQALKEARDSITSVHVSD-HEIL-TASLD----------CRIRRYDIRTGNLVTDYV---GEPIVDACFTRDCQCILT 433 (540)
Q Consensus 369 ~~~~~~~~~~~~v~~l~~~~-~~l~-~~~~d----------g~i~iwd~~~~~~~~~~~---~~~i~~~~~sp~~~~l~~ 433 (540)
. .......+.+++ ..++ ++..+ +.|.++|..+++....+. +.....++++|+++.|++
T Consensus 169 ------~-~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 169 ------T-IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp ------E-CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred ------E-cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 0 001123455565 3333 33333 789999999998876665 346899999999998888
Q ss_pred ecCCCeEEEEeccccchhhh--hccCcCCcceEEEEecCC-CCeEEEe----eCCCcEEEEEecCCcceeEEEeccccee
Q psy18231 434 CSTDECLRLFDKATGELLEE--YKGHKSGDFRIECCLDSK-DSQIFCG----SSDGKIYKWQLVDSSQISTLIHSVGKAV 506 (540)
Q Consensus 434 ~~~dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~s~~-~~~l~s~----s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 506 (540)
+.. .|.+||..+++.... +..+......+ +++|+ +.++++. ..++.|.+||.. ++.+.++.. ...
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi--~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~---G~~ 313 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGL--TVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV---GII 313 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEE--EECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE---EES
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEE--EEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe---ccC
Confidence 765 899999988875421 12112333444 89985 5555555 578999999987 998888863 233
Q ss_pred eeEEEE
Q psy18231 507 VNSLCS 512 (540)
Q Consensus 507 v~~l~~ 512 (540)
...++|
T Consensus 314 P~~~~~ 319 (328)
T 3dsm_A 314 PGAFCW 319 (328)
T ss_dssp EEEEEE
T ss_pred cceEEE
Confidence 455555
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.69 E-value=1.3e-14 Score=135.29 Aligned_cols=268 Identities=11% Similarity=0.099 Sum_probs=186.9
Q ss_pred EEeCCCCCEEEEeeC-----CCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEee----------CCCeEEEEE
Q psy18231 170 TRFPVDGSYCLTCGS-----DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA----------SDKSVILWE 234 (540)
Q Consensus 170 v~~spdg~~lat~~~-----dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s----------~dg~i~iwd 234 (540)
....|+++++++... ++.|.+.|..+++.+.++..-..+ . ++++|||++++.++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 345789998887765 679999999999999999755555 4 99999999988775 367899999
Q ss_pred cCCCceeEecccc-------CCceeEEEECCCCCEEEEecC--CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEE
Q psy18231 235 VTTGQPVRRWREH-------ASKVTCVKFNEDSSVVISGSQ--DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305 (540)
Q Consensus 235 ~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (540)
..+++.+..+.-. ......+.|+|||++++.+.. ++.|.++|+.+.+.....
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI------------------- 176 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML------------------- 176 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE-------------------
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE-------------------
Confidence 9999988876432 124667999999999888764 689999999887620000
Q ss_pred EeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEE
Q psy18231 306 SLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385 (540)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 385 (540)
.. .+ ...+.
T Consensus 177 -------------------------------------------------------------------~v---~g-~~~~~ 185 (386)
T 3sjl_D 177 -------------------------------------------------------------------DV---PD-CYHIF 185 (386)
T ss_dssp -------------------------------------------------------------------EC---CS-EEEEE
T ss_pred -------------------------------------------------------------------EC---CC-cceee
Confidence 00 00 00111
Q ss_pred e-cCCeeEeeeCCCeEEEEeCCC-CceEEeeeC------Cce-EEEEEe-cCCcEEEeecCCCeEEEEeccccc--hhhh
Q psy18231 386 V-SDHEILTASLDCRIRRYDIRT-GNLVTDYVG------EPI-VDACFT-RDCQCILTCSTDECLRLFDKATGE--LLEE 453 (540)
Q Consensus 386 ~-~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~------~~i-~~~~~s-p~~~~l~~~~~dg~i~i~d~~~~~--~~~~ 453 (540)
. ....+++.+.||++.+.++.+ ++....... .++ ....|. ++|++++ .+.+|.|++.|+.+.. .+..
T Consensus 186 P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~ 264 (386)
T 3sjl_D 186 PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPA 264 (386)
T ss_dssp EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCC
T ss_pred cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecc
Confidence 1 125677888899999999876 554321111 122 224664 6887655 4457999999987553 2222
Q ss_pred hc---------c-CcCCcceEEEEecCCCCeEEEeeC----------CCcEEEEEecCCcceeEEEecccceeeeEEEEc
Q psy18231 454 YK---------G-HKSGDFRIECCLDSKDSQIFCGSS----------DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 513 (540)
Q Consensus 454 ~~---------~-~~~~v~~~~~~~s~~~~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 513 (540)
+. + .......+ +++++++.++.... .+.|.+.|+.+++.+..+.. ...+.+|+++
T Consensus 265 ~~~~~~~~~~~g~~p~g~q~~--a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v---g~~~~~lavs 339 (386)
T 3sjl_D 265 VEALTEAERADGWRPGGWQQV--AYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM---GHEIDSINVS 339 (386)
T ss_dssp EESSCHHHHHTTEEECSSSCE--EEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---EEEECEEEEC
T ss_pred eeccccccccccccCCCccee--eECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC---CCCcceEEEC
Confidence 21 0 11222334 67899998887643 25799999999999999974 3478899999
Q ss_pred CCCc-EEEee-c-CCeeEEEEcccc
Q psy18231 514 PTRK-HIMSA-C-GNNVKLWTAEED 535 (540)
Q Consensus 514 ~d~~-~l~s~-~-d~~i~iw~~~~~ 535 (540)
+|++ +|+++ . ++.|.++|..++
T Consensus 340 ~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 340 QDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp SSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CCCCeEEEEEcCCCCeEEEEECCCC
Confidence 9997 66664 4 899999999765
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=1e-14 Score=132.73 Aligned_cols=238 Identities=7% Similarity=-0.004 Sum_probs=162.4
Q ss_pred CeEEEEeCCCCCEEE-EeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEec
Q psy18231 166 GLMHTRFPVDGSYCL-TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244 (540)
Q Consensus 166 ~v~~v~~spdg~~la-t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (540)
...+++++++|++++ +.+.++.|.+||..+.........+...+.+++++++++++++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 677899999999776 546789999999766543322223445788999999998666666 889999998665443222
Q ss_pred cccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEE
Q psy18231 245 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLV 324 (540)
Q Consensus 245 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (540)
......+..++++++++++++...++.|.+|+..+... ..
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~~-------------------------------------- 143 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--TV-------------------------------------- 143 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--EE--------------------------------------
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--Ee--------------------------------------
Confidence 23336789999999999777777788899986443221 00
Q ss_pred EeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEE
Q psy18231 325 FAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRR 402 (540)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~i 402 (540)
........+.++++++ +++++...++.|.+
T Consensus 144 ------------------------------------------------~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 144 ------------------------------------------------LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK 175 (270)
T ss_dssp ------------------------------------------------CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEE
T ss_pred ------------------------------------------------eccccCCCceeEEEeCCCCEEEEECCCCEEEE
Confidence 0001112345677776 44555556789999
Q ss_pred EeCCCCceEEeee-C-CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeC
Q psy18231 403 YDIRTGNLVTDYV-G-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS 480 (540)
Q Consensus 403 wd~~~~~~~~~~~-~-~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~ 480 (540)
||........... + ..+..++++++|.++++...++.|.+||............+...+..+ +++++|+++++...
T Consensus 176 ~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i--~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 176 LEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAV--AVDSDRTVYVADRG 253 (270)
T ss_dssp ECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEE--EECTTCCEEEEEGG
T ss_pred EecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeE--EECCCCCEEEEECC
Confidence 9998766544322 2 568899999999888887788999999986554332222222334445 89999998888889
Q ss_pred CCcEEEEEecCCcc
Q psy18231 481 DGKIYKWQLVDSSQ 494 (540)
Q Consensus 481 dg~i~iwd~~~~~~ 494 (540)
++.|+++++...+.
T Consensus 254 ~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 254 NDRVVKLTSLEHHH 267 (270)
T ss_dssp GTEEEEECCCGGGS
T ss_pred CCEEEEEcCCCccc
Confidence 99999999876554
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.66 E-value=1.8e-14 Score=131.06 Aligned_cols=237 Identities=8% Similarity=0.012 Sum_probs=162.4
Q ss_pred ceeEEEEeeCCCeEE-EeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcc
Q psy18231 208 EVNDATAACDSSQIA-SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 286 (540)
Q Consensus 208 ~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 286 (540)
...++++++++++++ +.+.++.|.+||..++........+...+.+++++++++++++.. ++.|.+||.........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~- 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL- 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee-
Confidence 678899999999777 557789999999766544332223445788999999998666655 88999998765431000
Q ss_pred hhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccccc
Q psy18231 287 VRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI 366 (540)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (540)
T Consensus 103 -------------------------------------------------------------------------------- 102 (270)
T 1rwi_B 103 -------------------------------------------------------------------------------- 102 (270)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEE
Q psy18231 367 HNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRL 442 (540)
Q Consensus 367 ~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i 442 (540)
.......+.++++++ .++++...++.|.+|+..+......... ..+..++++|+|+++++...++.|.+
T Consensus 103 -------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 103 -------PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK 175 (270)
T ss_dssp -------CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEE
T ss_pred -------ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEE
Confidence 001123467788887 4455556678999998766544332222 46788999999998887777889999
Q ss_pred EeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEee
Q psy18231 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522 (540)
Q Consensus 443 ~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 522 (540)
||............+......+ +++++|.++++...++.|.+||....... .... .+...+.+++++++|+++++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~p~~i--~~d~~g~l~v~~~~~~~v~~~~~~~~~~~-~~~~-~~~~~p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 176 LEAESNNQVVLPFTDITAPWGI--AVDEAGTVYVTEHNTNQVVKLLAGSTTST-VLPF-TGLNTPLAVAVDSDRTVYVAD 251 (270)
T ss_dssp ECTTTCCEEECCCSSCCSEEEE--EECTTCCEEEEETTTSCEEEECTTCSCCE-ECCC-CSCSCEEEEEECTTCCEEEEE
T ss_pred EecCCCceEeecccCCCCceEE--EECCCCCEEEEECCCCcEEEEcCCCCcce-eecc-CCCCCceeEEECCCCCEEEEE
Confidence 9987665433222222334445 89999977777777889999997554332 2221 334578999999999988888
Q ss_pred c-CCeeEEEEcccccC
Q psy18231 523 C-GNNVKLWTAEEDYG 537 (540)
Q Consensus 523 ~-d~~i~iw~~~~~~~ 537 (540)
. ++.|++++......
T Consensus 252 ~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 252 RGNDRVVKLTSLEHHH 267 (270)
T ss_dssp GGGTEEEEECCCGGGS
T ss_pred CCCCEEEEEcCCCccc
Confidence 7 99999999987643
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=5.3e-14 Score=127.65 Aligned_cols=211 Identities=9% Similarity=0.066 Sum_probs=159.9
Q ss_pred CCCeEEEeeCCCeEEEEEcCCCceeEeccccC-CceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhh
Q psy18231 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHA-SKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALK 295 (540)
Q Consensus 217 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 295 (540)
.+++|++++.|+.|.+||.++|+.+..+..+. ..+.++.++|+|+++++ .++.|..||. +++. +
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~--~---------- 68 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRE--L---------- 68 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCE--E----------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCE--E----------
Confidence 46789999999999999999999999988766 57899999999998883 4678999988 5541 0
Q ss_pred hcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhh
Q psy18231 296 EARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALK 375 (540)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (540)
| .+.
T Consensus 69 ---------------------------------------------------------------W-------------~~~ 72 (276)
T 3no2_A 69 ---------------------------------------------------------------W-------------NIA 72 (276)
T ss_dssp ---------------------------------------------------------------E-------------EEE
T ss_pred ---------------------------------------------------------------E-------------EEc
Confidence 0 000
Q ss_pred c-ccccEEEEEecC--CeeEeeeC-CCeEEEEeCCCCceEEeeeC--------CceEEEEEecCCcEEEeecCCCeEEEE
Q psy18231 376 E-ARDSITSVHVSD--HEILTASL-DCRIRRYDIRTGNLVTDYVG--------EPIVDACFTRDCQCILTCSTDECLRLF 443 (540)
Q Consensus 376 ~-~~~~v~~l~~~~--~~l~~~~~-dg~i~iwd~~~~~~~~~~~~--------~~i~~~~~sp~~~~l~~~~~dg~i~i~ 443 (540)
. ....+.++.+.+ +.+++.+. ++.+..+|. +++.+.++.- .....+++.++|+++++...++.|..|
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~ 151 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 151 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEE
T ss_pred CCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEE
Confidence 0 112355666666 66666666 777888886 6776665541 134556789999999999999999999
Q ss_pred eccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecc----cceeeeEEEEcCCCcEE
Q psy18231 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV----GKAVVNSLCSHPTRKHI 519 (540)
Q Consensus 444 d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~s~d~~~l 519 (540)
|.. |+.+.++..+.. ...+ ...++|+.+++++.++.|..+|..+++.+.++.... ....+..++..++|.++
T Consensus 152 d~~-G~~~w~~~~~~~-~~~~--~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 152 APN-GQLLNSVKLSGT-PFSS--AFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp CTT-SCEEEEEECSSC-CCEE--EECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred CCC-CCEEEEEECCCC-ccce--eEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE
Confidence 987 999888876533 3444 678999999999998999999999999999887211 12347888999999988
Q ss_pred Eeec
Q psy18231 520 MSAC 523 (540)
Q Consensus 520 ~s~~ 523 (540)
++..
T Consensus 228 v~~~ 231 (276)
T 3no2_A 228 ICNW 231 (276)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8873
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.64 E-value=6.8e-14 Score=130.55 Aligned_cols=277 Identities=9% Similarity=0.040 Sum_probs=184.6
Q ss_pred cceeeeecccccceee-eeecCeEEEEeCCCCCEEEEee----------CCCcEEEEcCCCCeeEEEeecCC-------c
Q psy18231 146 EWSIRVYRPLTVNREL-FVLSGLMHTRFPVDGSYCLTCG----------SDKKIKLWNPYRNLLLKTYGGHA-------H 207 (540)
Q Consensus 146 ~~~i~~~~~~~~~~~~-~h~~~v~~v~~spdg~~lat~~----------~dg~i~iwd~~~~~~~~~~~~h~-------~ 207 (540)
+..+.+.+..+..... ...+.--.+++||||++|+++. .++.|.+||..+++.+.++.... .
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~ 137 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGT 137 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred CCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCC
Confidence 3567777776644221 1222222499999999988765 36789999999999998875321 2
Q ss_pred ceeEEEEeeCCCeEEEeeC--CCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecC-CCCCC
Q psy18231 208 EVNDATAACDSSQIASGAS--DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHP 284 (540)
Q Consensus 208 ~v~~l~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~ 284 (540)
.-..++|+|||++|+.+.. ++.|.++|+.+++.+.++.-.. . ...+....+.+++.+.||.+.+.++.+ ++.
T Consensus 138 ~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v-- 212 (386)
T 3sjl_D 138 YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP-- 212 (386)
T ss_dssp CGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCC--
T ss_pred CCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeE--
Confidence 4567999999999888864 6899999999999988875322 1 223333446777888899999999876 331
Q ss_pred cchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccc
Q psy18231 285 IQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPI 364 (540)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (540)
.... . .
T Consensus 213 ~~~~-----------------------------------------------------------------~--~------- 218 (386)
T 3sjl_D 213 EITH-----------------------------------------------------------------T--E------- 218 (386)
T ss_dssp EEEE-----------------------------------------------------------------C--C-------
T ss_pred EEee-----------------------------------------------------------------c--c-------
Confidence 0000 0 0
Q ss_pred ccccchhhhhhcccccEE-EEEec-C-CeeEeeeCCCeEEEEeCCCCc--eEEeee------------CCceEEEEEecC
Q psy18231 365 SIHNSCFQALKEARDSIT-SVHVS-D-HEILTASLDCRIRRYDIRTGN--LVTDYV------------GEPIVDACFTRD 427 (540)
Q Consensus 365 ~~~~~~~~~~~~~~~~v~-~l~~~-~-~~l~~~~~dg~i~iwd~~~~~--~~~~~~------------~~~i~~~~~sp~ 427 (540)
.+......+. ...|. + ..++..+.+|.+.+.|+.+.. ....+. ......++++|+
T Consensus 219 --------~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~ 290 (386)
T 3sjl_D 219 --------VFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA 290 (386)
T ss_dssp --------CCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred --------eeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCC
Confidence 0000000000 11332 2 444446668999999997664 333332 134456788999
Q ss_pred CcEEEeecC----------CCeEEEEeccccchhhhhccCcCCcceEEEEecCCCC-eEEEe-eCCCcEEEEEecCCcce
Q psy18231 428 CQCILTCST----------DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS-QIFCG-SSDGKIYKWQLVDSSQI 495 (540)
Q Consensus 428 ~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~s~-s~dg~i~iwd~~~~~~~ 495 (540)
++.+++... .+.|.++|+.+++.+..+.... .++.+ ++++|++ +|++. ..++.|.++|..+++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-~~~~l--avs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSI--NVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEE--EECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-CcceE--EECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 988887643 2579999999999988876543 34555 8999997 66665 45899999999999999
Q ss_pred eEEEecccceeeeEEEEcCC
Q psy18231 496 STLIHSVGKAVVNSLCSHPT 515 (540)
Q Consensus 496 ~~~~~~~~~~~v~~l~~s~d 515 (540)
.++...+| .+.|.+++|
T Consensus 368 ~~i~~~~~---p~~l~~s~d 384 (386)
T 3sjl_D 368 RSVNQLGH---GPQVITTAD 384 (386)
T ss_dssp EEECCCCS---SCCEEEECC
T ss_pred EEecCCCC---CceeEECCc
Confidence 99975444 455666666
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=2e-14 Score=150.29 Aligned_cols=272 Identities=13% Similarity=0.049 Sum_probs=169.6
Q ss_pred CCCCCEEEEeeCCCc---EEEE--cCC---CCeeEEEe------ecCCcceeEEEEeeCCCeEEEeeCC-----CeEEEE
Q psy18231 173 PVDGSYCLTCGSDKK---IKLW--NPY---RNLLLKTY------GGHAHEVNDATAACDSSQIASGASD-----KSVILW 233 (540)
Q Consensus 173 spdg~~lat~~~dg~---i~iw--d~~---~~~~~~~~------~~h~~~v~~l~~sp~~~~l~s~s~d-----g~i~iw 233 (540)
+|||++++....++. -.+| +.. .++....+ .+|...+..++|||||++||.++.+ .+|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 389998886544332 4445 433 33322221 2234478899999999999887654 469999
Q ss_pred EcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCc--------------EEEEEecCCCCCCcchhhhhHhhhhcCC
Q psy18231 234 EVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT--------------VMMWDVKSRSHHPIQVRCLNEALKEARD 299 (540)
Q Consensus 234 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 299 (540)
|+.+++.+... .+...+..++|+|| +.|+.++.++. |++|++.++......
T Consensus 195 dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~l------------- 259 (741)
T 1yr2_A 195 GVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQP------------- 259 (741)
T ss_dssp ETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEE-------------
T ss_pred ECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEE-------------
Confidence 99999876531 22223467899999 98888877654 666666543310000
Q ss_pred ceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccc
Q psy18231 300 SITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARD 379 (540)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (540)
+.....+..
T Consensus 260 -----------------------------------------------------------------------v~~~~~~~~ 268 (741)
T 1yr2_A 260 -----------------------------------------------------------------------VFATPELPK 268 (741)
T ss_dssp -----------------------------------------------------------------------EECCTTCTT
T ss_pred -----------------------------------------------------------------------EeccCCCCe
Confidence 001112233
Q ss_pred cEEEEEecC--CeeEeeeCC-----CeEEEEeCCCC--ceEEeeeC--CceEEEEEecCCcEEEeecC----CCeEEEEe
Q psy18231 380 SITSVHVSD--HEILTASLD-----CRIRRYDIRTG--NLVTDYVG--EPIVDACFTRDCQCILTCST----DECLRLFD 444 (540)
Q Consensus 380 ~v~~l~~~~--~~l~~~~~d-----g~i~iwd~~~~--~~~~~~~~--~~i~~~~~sp~~~~l~~~~~----dg~i~i~d 444 (540)
.+..+.|+| ++++..+.+ ..|++||+.++ +....+.. ...... ++|+|+.|+..+. ++.|.+||
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence 467888888 566666644 38999999877 31333332 233333 4588888887765 45699999
Q ss_pred cccc--chhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEec-CCcceeEEEecccceeeeEEEEcCCCcEEE-
Q psy18231 445 KATG--ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV-DSSQISTLIHSVGKAVVNSLCSHPTRKHIM- 520 (540)
Q Consensus 445 ~~~~--~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~- 520 (540)
+.++ +....+..+...+..+ +++ ++.++++...|+..++|.+. +++....+.. .+.+.+..+.++|+++.|+
T Consensus 348 ~~~~~~~~~~l~~~~~~~l~~~--~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s~d~~~l~~ 423 (741)
T 1yr2_A 348 LSGSTPRFDTVVPESKDNLESV--GIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PGIGSASGLSGRPGDRHAYL 423 (741)
T ss_dssp CSSSSCEEEEEECCCSSEEEEE--EEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC-SSSCEEEEEECCBTCSCEEE
T ss_pred CCCCccccEEEecCCCCeEEEE--EEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC-CCCeEEEEeecCCCCCEEEE
Confidence 8874 2222333333333333 555 56678888999988888765 4665555542 2467799999999988666
Q ss_pred ---eec-CCeeEEEEcccc
Q psy18231 521 ---SAC-GNNVKLWTAEED 535 (540)
Q Consensus 521 ---s~~-d~~i~iw~~~~~ 535 (540)
+.. .++|++||+.++
T Consensus 424 ~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 424 SFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEETTEEEEEEEEETTTT
T ss_pred EEcCCCCCCEEEEEECCCC
Confidence 223 579999998764
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.63 E-value=1.3e-13 Score=131.07 Aligned_cols=265 Identities=11% Similarity=0.067 Sum_probs=183.4
Q ss_pred CCCCEEEEeeCC-----CcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEee----------CCCeEEEEEcCCC
Q psy18231 174 VDGSYCLTCGSD-----KKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA----------SDKSVILWEVTTG 238 (540)
Q Consensus 174 pdg~~lat~~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s----------~dg~i~iwd~~~~ 238 (540)
|+++++++.... +.|.++|..+++.+.++..-..+ .++++||+++|+.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 466666655442 69999999999999999755555 899999999988876 3678999999999
Q ss_pred ceeEecccc-------CCceeEEEECCCCCEEEEecC--CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeec
Q psy18231 239 QPVRRWREH-------ASKVTCVKFNEDSSVVISGSQ--DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVK 309 (540)
Q Consensus 239 ~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (540)
+.+..+.-. ......+.|+|||++++.+.. ++.|.+.|+.+.+.....
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I----------------------- 216 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRML----------------------- 216 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE-----------------------
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEE-----------------------
Confidence 988776421 234567899999999998864 578999999887620000
Q ss_pred ccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEec-C
Q psy18231 310 STKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVS-D 388 (540)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~ 388 (540)
.. .+ ...+... +
T Consensus 217 ---------------------------------------------------------------~v---~g-~~~~~p~g~ 229 (426)
T 3c75_H 217 ---------------------------------------------------------------DV---PD-CYHIFPASP 229 (426)
T ss_dssp ---------------------------------------------------------------EC---CS-EEEEEEEET
T ss_pred ---------------------------------------------------------------Ec---CC-ceeeccCCC
Confidence 00 00 0011111 1
Q ss_pred CeeEeeeCCCeEEEEeCCCCceEEe----ee--CCc-eEEEEEecCCcEEEeecCCCeEEEEeccccch--hhhhc----
Q psy18231 389 HEILTASLDCRIRRYDIRTGNLVTD----YV--GEP-IVDACFTRDCQCILTCSTDECLRLFDKATGEL--LEEYK---- 455 (540)
Q Consensus 389 ~~l~~~~~dg~i~iwd~~~~~~~~~----~~--~~~-i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~---- 455 (540)
..+++.+.||++.+.+..+++.... +. ..+ ...+.+++++..++..+..+.+.+.|...... +..+.
T Consensus 230 ~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~ 309 (426)
T 3c75_H 230 TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTE 309 (426)
T ss_dssp TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCT
T ss_pred cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccc
Confidence 4456666788888788765554422 11 112 22457899988877777889999999865431 11111
Q ss_pred ------cCcCCcceEEEEecCCCCeEEEeeC----------CCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCc-E
Q psy18231 456 ------GHKSGDFRIECCLDSKDSQIFCGSS----------DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-H 518 (540)
Q Consensus 456 ------~~~~~v~~~~~~~s~~~~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~ 518 (540)
........+ +++++++.+++... ++.|.+.|..+.+.+.++.. ......++|+|||+ +
T Consensus 310 ~~i~~g~~p~g~~~v--a~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v---g~~P~gia~spDg~~~ 384 (426)
T 3c75_H 310 AERADDWRPGGWQQT--AYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL---GHEIDSINVSQDAEPL 384 (426)
T ss_dssp TTGGGTEEECSSSCE--EEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---EEEECEEEECCSSSCE
T ss_pred cccccccccCCceee--EEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC---CCCcCeEEEccCCCEE
Confidence 011112224 78999888776642 35799999999999999973 23589999999998 7
Q ss_pred EEeec--CCeeEEEEcccc
Q psy18231 519 IMSAC--GNNVKLWTAEED 535 (540)
Q Consensus 519 l~s~~--d~~i~iw~~~~~ 535 (540)
++++. ++.|.++|+.+.
T Consensus 385 lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 385 LYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEEETTTTEEEEEETTTC
T ss_pred EEEEcCCCCeEEEEECCCC
Confidence 77776 899999998764
No 201
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=2.8e-13 Score=124.31 Aligned_cols=215 Identities=13% Similarity=0.209 Sum_probs=151.5
Q ss_pred cccceeeeecccccce-ee-------eeecCeEEEEe-CCCCCEEEEeeC-CCcEEEEcCCCCeeEEEeec-CCcceeEE
Q psy18231 144 PKEWSIRVYRPLTVNR-EL-------FVLSGLMHTRF-PVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGG-HAHEVNDA 212 (540)
Q Consensus 144 ~~~~~i~~~~~~~~~~-~~-------~h~~~v~~v~~-spdg~~lat~~~-dg~i~iwd~~~~~~~~~~~~-h~~~v~~l 212 (540)
..+..|.+|+...... .. .|...+..+++ .++++++++... ++.|.+|| .+++.+..+.. +...+.++
T Consensus 48 ~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i 126 (286)
T 1q7f_A 48 TNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGV 126 (286)
T ss_dssp GGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEE
T ss_pred CCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEE
Confidence 4456677777553221 11 23457899999 578876666543 89999999 67777776643 44678999
Q ss_pred EEeeCCCeEEEeeCCCeEEEEEcCCCceeEecc--ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhh
Q psy18231 213 TAACDSSQIASGASDKSVILWEVTTGQPVRRWR--EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290 (540)
Q Consensus 213 ~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 290 (540)
+++|+++++++...++.|.+||. +++.+..+. .+...+..++++++++++++.+.++.|.+||...... .
T Consensus 127 ~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~---~---- 198 (286)
T 1q7f_A 127 TVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYL---R---- 198 (286)
T ss_dssp EECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEE---E----
T ss_pred EEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEE---E----
Confidence 99999998888888899999996 466655553 3456789999999999888878889999999643210 0
Q ss_pred hHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccch
Q psy18231 291 NEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSC 370 (540)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (540)
.+
T Consensus 199 ----------------------------------------------------------~~-------------------- 200 (286)
T 1q7f_A 199 ----------------------------------------------------------QI-------------------- 200 (286)
T ss_dssp ----------------------------------------------------------EE--------------------
T ss_pred ----------------------------------------------------------EE--------------------
Confidence 00
Q ss_pred hhhhhcccccEEEEEecC--CeeEeeeCCC-eEEEEeCCCCceEEeeeC----CceEEEEEecCCcEEEeecCCCeEEEE
Q psy18231 371 FQALKEARDSITSVHVSD--HEILTASLDC-RIRRYDIRTGNLVTDYVG----EPIVDACFTRDCQCILTCSTDECLRLF 443 (540)
Q Consensus 371 ~~~~~~~~~~v~~l~~~~--~~l~~~~~dg-~i~iwd~~~~~~~~~~~~----~~i~~~~~sp~~~~l~~~~~dg~i~i~ 443 (540)
...++...+..+++++ .++++...++ .|.+||.. ++.+..+.. ..+..++++|+|+++++ +.|+.|++|
T Consensus 201 --~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~ 276 (286)
T 1q7f_A 201 --GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIY 276 (286)
T ss_dssp --SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEE
T ss_pred --ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEE
Confidence 0011224567888887 5555555665 99999964 666655543 24789999999987777 578999999
Q ss_pred eccccc
Q psy18231 444 DKATGE 449 (540)
Q Consensus 444 d~~~~~ 449 (540)
+.....
T Consensus 277 ~~~~~~ 282 (286)
T 1q7f_A 277 RYVQLA 282 (286)
T ss_dssp ECSCCC
T ss_pred Eccccc
Confidence 986543
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=2.7e-12 Score=118.50 Aligned_cols=273 Identities=10% Similarity=-0.014 Sum_probs=186.8
Q ss_pred ecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEE-EeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeE
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR 242 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (540)
...+.+++++++|+..++...++.|.+||.. ++... .+..+...+.++++.++++++++...++.|..||.. ++...
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 3567899999999987777678999999987 55433 223334678999999999988877778899999987 65432
Q ss_pred -eccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCcee
Q psy18231 243 -RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLT 321 (540)
Q Consensus 243 -~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (540)
.+......+..+++.++++++++...++.|..+|.. ++....
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~------------------------------------ 139 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEY------------------------------------ 139 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEE------------------------------------
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEc------------------------------------
Confidence 222344678999999999888877767888888865 331000
Q ss_pred eEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCe
Q psy18231 322 KLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCR 399 (540)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~ 399 (540)
.+......+.++++++ ++.++...++.
T Consensus 140 ---------------------------------------------------~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 140 ---------------------------------------------------DLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp ---------------------------------------------------ECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred ---------------------------------------------------cCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 0001123566788877 44444445788
Q ss_pred EEEEeCCCCceEEee-e--CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhh-hccCcCCcceEEEEecCCCCeE
Q psy18231 400 IRRYDIRTGNLVTDY-V--GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEE-YKGHKSGDFRIECCLDSKDSQI 475 (540)
Q Consensus 400 i~iwd~~~~~~~~~~-~--~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~~~~~l 475 (540)
|..||. +++..... . ...+..++++++|++.++....+.|.+||. +++.... +..+...+..+ +++++|++.
T Consensus 169 i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i--~~d~~g~l~ 244 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAI--TAGKNSEIW 244 (300)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEE--EECSTTCEE
T ss_pred EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEE--EECCCCCEE
Confidence 999998 55544321 1 246889999999988877777788999998 4443221 22223334444 889999877
Q ss_pred EEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEcc
Q psy18231 476 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533 (540)
Q Consensus 476 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~ 533 (540)
++...++.|..||. +++. ..+........+.+++++++|++.++... .|..++.+
T Consensus 245 v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 245 FTEWGANQIGRITN-DNTI-QEYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNLN 299 (300)
T ss_dssp EEETTTTEEEEECT-TSCE-EEEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEEC
T ss_pred EeccCCCeEEEECC-CCcE-EEEECCccCCccceeEeCCCCCEEEEccC-ceEEeCCC
Confidence 77667789999997 4443 33432234567899999999987666554 66666653
No 203
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.62 E-value=1.2e-13 Score=129.42 Aligned_cols=215 Identities=10% Similarity=0.112 Sum_probs=155.7
Q ss_pred cceeeeecccccceee----eeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe-eEEEe---------ecCCcceeE
Q psy18231 146 EWSIRVYRPLTVNREL----FVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTY---------GGHAHEVND 211 (540)
Q Consensus 146 ~~~i~~~~~~~~~~~~----~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~-~~~~~---------~~h~~~v~~ 211 (540)
+..|.+|+..+..... .+......++++|+|+++++...++.|++||..... .+..+ .++......
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred CCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence 4567888876544221 234578999999999988888889999999975442 45555 234557889
Q ss_pred EEEee-CCCeEEEee-CCCeEEEEEcCCCceeEecccc----------CCceeEEEECCC-CCEEEEecCCCcEEEEEec
Q psy18231 212 ATAAC-DSSQIASGA-SDKSVILWEVTTGQPVRRWREH----------ASKVTCVKFNED-SSVVISGSQDNTVMMWDVK 278 (540)
Q Consensus 212 l~~sp-~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~h----------~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~ 278 (540)
++++| ++.++++.+ .++.|++|| .+++.+..+... -.....++++|+ +.++++...++.|++||..
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 99999 788888886 689999999 577777766432 234899999998 7777787888999999988
Q ss_pred CCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceec
Q psy18231 279 SRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQI 358 (540)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (540)
+++.....
T Consensus 227 ~G~~~~~~------------------------------------------------------------------------ 234 (329)
T 3fvz_A 227 TKEFVREI------------------------------------------------------------------------ 234 (329)
T ss_dssp TCCEEEEE------------------------------------------------------------------------
T ss_pred CCcEEEEE------------------------------------------------------------------------
Confidence 66510000
Q ss_pred ccccccccccchhhhhhcccccEEEEEecCC--------eeEeeeCCCeEEEEeCCCCceEEeee---C--CceEEEEEe
Q psy18231 359 GDVTPISIHNSCFQALKEARDSITSVHVSDH--------EILTASLDCRIRRYDIRTGNLVTDYV---G--EPIVDACFT 425 (540)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--------~l~~~~~dg~i~iwd~~~~~~~~~~~---~--~~i~~~~~s 425 (540)
....+...+.+++++|. ..++...+..|++||..+++.+..+. . .....++++
T Consensus 235 --------------~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 235 --------------KHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp --------------CCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred --------------eccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence 00122234445555552 23333445689999999999988874 2 468999999
Q ss_pred cCCcEEEeecCCCeEEEEeccc
Q psy18231 426 RDCQCILTCSTDECLRLFDKAT 447 (540)
Q Consensus 426 p~~~~l~~~~~dg~i~i~d~~~ 447 (540)
|+|.++++...++.|++|++..
T Consensus 301 ~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 301 EDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TTSEEEEEESSSCCEEEEEEEE
T ss_pred CCCCEEEEECCCCEEEEEeCCc
Confidence 9999888888999999999754
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=9.4e-13 Score=122.61 Aligned_cols=240 Identities=9% Similarity=0.067 Sum_probs=160.5
Q ss_pred CCcceeEEEEeeCCCeEEE-------eeCCCeEEEEEcCCCceeEecc----ccCCceeEEEECCC-CCEEEEecCCCcE
Q psy18231 205 HAHEVNDATAACDSSQIAS-------GASDKSVILWEVTTGQPVRRWR----EHASKVTCVKFNED-SSVVISGSQDNTV 272 (540)
Q Consensus 205 h~~~v~~l~~sp~~~~l~s-------~s~dg~i~iwd~~~~~~~~~~~----~h~~~v~~~~~~~~-~~~l~s~~~dg~i 272 (540)
.-....+++|++++.++++ ...++.|.+||..+++...... ++...+..++++++ ++++++.. .+.|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l 94 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGL 94 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCE
Confidence 3445688999999988888 6778999999988887543221 25567899999999 76555544 4478
Q ss_pred EEEEecCCCCCCc-chhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEee
Q psy18231 273 MMWDVKSRSHHPI-QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD 351 (540)
Q Consensus 273 ~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (540)
.+||.. ++.... . ..
T Consensus 95 ~~~d~~-g~~~~~~~--~~------------------------------------------------------------- 110 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAK--KD------------------------------------------------------------- 110 (314)
T ss_dssp EEEETT-SCEEECCS--BC-------------------------------------------------------------
T ss_pred EEEeCC-CCEEEEEe--cc-------------------------------------------------------------
Confidence 889877 441100 0 00
Q ss_pred cccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeCC---------------CeEEEEeCCCCceEEee
Q psy18231 352 FLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASLD---------------CRIRRYDIRTGNLVTDY 414 (540)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~d---------------g~i~iwd~~~~~~~~~~ 414 (540)
........+.++++++ .++++...+ +.|..||.. ++.....
T Consensus 111 ---------------------~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 111 ---------------------SEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp ---------------------TTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred ---------------------CCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 0001123456677776 344443333 567778776 5543332
Q ss_pred e-CCceEEEEEe----cCCcEEEee-cCCCeEEEEecc-ccc-----hhhhhccCc-CCcceEEEEecCCCCeEEEeeCC
Q psy18231 415 V-GEPIVDACFT----RDCQCILTC-STDECLRLFDKA-TGE-----LLEEYKGHK-SGDFRIECCLDSKDSQIFCGSSD 481 (540)
Q Consensus 415 ~-~~~i~~~~~s----p~~~~l~~~-~~dg~i~i~d~~-~~~-----~~~~~~~~~-~~v~~~~~~~s~~~~~l~s~s~d 481 (540)
. ......++++ |+++.++++ ..++.|.+||.. +++ ....+..+. .....+ +++++|+++++...+
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i--~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM--DFDEDNNLLVANWGS 246 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE--EEBTTCCEEEEEETT
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce--EECCCCCEEEEEcCC
Confidence 2 2456889999 999765544 567899999976 343 222333332 233344 889999988888788
Q ss_pred CcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEE-eec-CCeeEEEEcccc
Q psy18231 482 GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM-SAC-GNNVKLWTAEED 535 (540)
Q Consensus 482 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~-s~~-d~~i~iw~~~~~ 535 (540)
+.|.+||..+++.+..+. .+...+.+++|+|+++.|. +.. ++.|..|+++..
T Consensus 247 ~~i~~~d~~~g~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TEEEEECTTCBSCSEEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CEEEEEcCCCCcEeEEEe--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 999999988788777776 5667899999999999554 444 789999998753
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.59 E-value=3.8e-12 Score=120.67 Aligned_cols=259 Identities=9% Similarity=-0.004 Sum_probs=169.7
Q ss_pred eeeeecccccceeee-eecCeEEEEeCCCCCEEEEee----------CCCcEEEEcCCCCeeEEEeecC-------Ccce
Q psy18231 148 SIRVYRPLTVNRELF-VLSGLMHTRFPVDGSYCLTCG----------SDKKIKLWNPYRNLLLKTYGGH-------AHEV 209 (540)
Q Consensus 148 ~i~~~~~~~~~~~~~-h~~~v~~v~~spdg~~lat~~----------~dg~i~iwd~~~~~~~~~~~~h-------~~~v 209 (540)
.+.+++..+...... ..+....++|||||++|+++. .++.|.+||..+.+.+.++... ...-
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p 127 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS 127 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 567777665442211 122223999999999999875 3678999999998888776432 1234
Q ss_pred eEEEEeeCCCeEEEeeC--CCeEEEEEcCCCceeEe-ccccCCceeEEEECCCC-CEEEEecCCCcEEEEEecCCCCCCc
Q psy18231 210 NDATAACDSSQIASGAS--DKSVILWEVTTGQPVRR-WREHASKVTCVKFNEDS-SVVISGSQDNTVMMWDVKSRSHHPI 285 (540)
Q Consensus 210 ~~l~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~ 285 (540)
..++|+|||++|+.++. ++.|.++| .+++.+.. +... . ++.+.|++ ..+++.+.||.+.++|. +++....
T Consensus 128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~ 201 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGA 201 (373)
T ss_pred cceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEE
Confidence 57999999999998874 57899999 99998877 6432 2 24455554 45667778999999999 6652100
Q ss_pred chhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccc
Q psy18231 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS 365 (540)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (540)
. ...
T Consensus 202 ~--~~~-------------------------------------------------------------------------- 205 (373)
T 2mad_H 202 G--LVG-------------------------------------------------------------------------- 205 (373)
T ss_pred E--ecc--------------------------------------------------------------------------
Confidence 0 000
Q ss_pred cccchhhhhhcccccE-EEEEecC--CeeEeeeCCCeEEEEeCCCCc--eEEeee------------CCceEEEEEecCC
Q psy18231 366 IHNSCFQALKEARDSI-TSVHVSD--HEILTASLDCRIRRYDIRTGN--LVTDYV------------GEPIVDACFTRDC 428 (540)
Q Consensus 366 ~~~~~~~~~~~~~~~v-~~l~~~~--~~l~~~~~dg~i~iwd~~~~~--~~~~~~------------~~~i~~~~~sp~~ 428 (540)
. .. ....++ ....+.+ ..++..+.++.+.+.|+.++. .+..+. ......+.++|++
T Consensus 206 ----~--~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~ 278 (373)
T 2mad_H 206 ----A--ML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSS 278 (373)
T ss_pred ----c--cc-cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCC
Confidence 0 00 000000 1111222 233333366788888886542 222221 1234457899999
Q ss_pred cEEEeecC----------CCeEEEEeccccchhhhhccCcCCcceEEEEecCCCC-eEEEee-CCCcEEEEEecCCccee
Q psy18231 429 QCILTCST----------DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS-QIFCGS-SDGKIYKWQLVDSSQIS 496 (540)
Q Consensus 429 ~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~s~s-~dg~i~iwd~~~~~~~~ 496 (540)
+.++++.. ++.|.++|..+++.+.++.... ....+ +|+|||+ .++++. .++.|.+||+.+++.+.
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i--~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAI--SVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeE--EECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 88877653 3579999999999988885433 34555 8999999 777777 58999999999999988
Q ss_pred EE
Q psy18231 497 TL 498 (540)
Q Consensus 497 ~~ 498 (540)
.+
T Consensus 356 ~i 357 (373)
T 2mad_H 356 ST 357 (373)
T ss_pred ee
Confidence 84
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=1.2e-12 Score=121.98 Aligned_cols=234 Identities=10% Similarity=0.144 Sum_probs=157.7
Q ss_pred ecCeEEEEeCCCCCEEEE-------eeCCCcEEEEcCCCCeeEEEee----cCCcceeEEEEeeC-CCeEEEeeCCCeEE
Q psy18231 164 LSGLMHTRFPVDGSYCLT-------CGSDKKIKLWNPYRNLLLKTYG----GHAHEVNDATAACD-SSQIASGASDKSVI 231 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat-------~~~dg~i~iwd~~~~~~~~~~~----~h~~~v~~l~~sp~-~~~l~s~s~dg~i~ 231 (540)
.....+++|+++|+++++ +..++.|.+||..+++...... ++...+.+++++++ ++++++.. .+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEE
Confidence 345789999999988887 6778999999988877543222 24567899999999 76555544 44799
Q ss_pred EEEcCCCceeEe-ccc----cCCceeEEEECCCCCEEEEecCC---------------CcEEEEEecCCCCCCcchhhhh
Q psy18231 232 LWEVTTGQPVRR-WRE----HASKVTCVKFNEDSSVVISGSQD---------------NTVMMWDVKSRSHHPIQVRCLN 291 (540)
Q Consensus 232 iwd~~~~~~~~~-~~~----h~~~v~~~~~~~~~~~l~s~~~d---------------g~i~iwd~~~~~~~~~~~~~~~ 291 (540)
+||.. ++.... ... +...+.+++++++|++.++...+ +.|..|+.. ++. .
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~---~----- 165 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM---I----- 165 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE---E-----
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE---E-----
Confidence 99988 765433 221 22458899999999877776544 234444322 110 0
Q ss_pred HhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchh
Q psy18231 292 EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF 371 (540)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (540)
T Consensus 166 -------------------------------------------------------------------------------- 165 (314)
T 1pjx_A 166 -------------------------------------------------------------------------------- 165 (314)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcccccEEEEEec----C--CeeEee-eCCCeEEEEeCC-CCce-----EEeeeC---CceEEEEEecCCcEEEeec
Q psy18231 372 QALKEARDSITSVHVS----D--HEILTA-SLDCRIRRYDIR-TGNL-----VTDYVG---EPIVDACFTRDCQCILTCS 435 (540)
Q Consensus 372 ~~~~~~~~~v~~l~~~----~--~~l~~~-~~dg~i~iwd~~-~~~~-----~~~~~~---~~i~~~~~sp~~~~l~~~~ 435 (540)
.+..+......++++ + +.++++ ..++.|.+||.+ +++. ...+.. .....++++++|+++++..
T Consensus 166 -~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 166 -QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp -EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred -EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 000111234566777 6 344444 567899999986 4432 222222 3578899999999888887
Q ss_pred CCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEE-EeeCCCcEEEEEecC
Q psy18231 436 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVD 491 (540)
Q Consensus 436 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~-s~s~dg~i~iwd~~~ 491 (540)
.++.|.+||..+++.+..+..+...+..+ +++++++.|+ +...++.|..|++..
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~i--~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRCPFEKPSNL--HFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEECSSSCEEEE--EECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEcCCCCcEeEEEeCCCCCceeE--EECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 88999999998787776666665556555 7899999554 555668899999764
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.58 E-value=1.5e-13 Score=143.70 Aligned_cols=240 Identities=13% Similarity=0.029 Sum_probs=153.4
Q ss_pred eecCeEEEEeCCCCCEEEEeeCC-----CcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCe--------
Q psy18231 163 VLSGLMHTRFPVDGSYCLTCGSD-----KKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS-------- 229 (540)
Q Consensus 163 h~~~v~~v~~spdg~~lat~~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~-------- 229 (540)
|...+..++|||||++||.++.+ .+|++||+.+++.+... .+...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44578899999999999976543 46999999999876542 22333467899999 98988877654
Q ss_pred ------EEEEEcCCCc----eeEeccccCCceeEEEECCCCCEEEEecCCC-----cEEEEEecCCCCCCcchhhhhHhh
Q psy18231 230 ------VILWEVTTGQ----PVRRWREHASKVTCVKFNEDSSVVISGSQDN-----TVMMWDVKSRSHHPIQVRCLNEAL 294 (540)
Q Consensus 230 ------i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~ 294 (540)
|.+|++.++. .+.....+...+..+.|+|||++|+..+.++ .|.+||+.++......
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~-------- 310 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT-------- 310 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE--------
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE--------
Confidence 8999997765 2222233444688999999999888777544 7899998765210000
Q ss_pred hhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhh
Q psy18231 295 KEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQAL 374 (540)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (540)
.+
T Consensus 311 ------------------------------------------------------------------------------~l 312 (741)
T 1yr2_A 311 ------------------------------------------------------------------------------AL 312 (741)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------Ee
Confidence 00
Q ss_pred hcccccEEE-EEecCCeeEeeeC----CCeEEEEeCCCCc-eEEee-eC--CceEEEEEecCCcEEEeecCCCeEEEEec
Q psy18231 375 KEARDSITS-VHVSDHEILTASL----DCRIRRYDIRTGN-LVTDY-VG--EPIVDACFTRDCQCILTCSTDECLRLFDK 445 (540)
Q Consensus 375 ~~~~~~v~~-l~~~~~~l~~~~~----dg~i~iwd~~~~~-~~~~~-~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~ 445 (540)
..+...+.. +....+.|+..+. ++.|.+||+.++. ....+ .. ..+..++++ ++.++++...|+..+||.+
T Consensus 313 ~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 313 IPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp ECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred cCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 111111111 1212255555544 4569999998752 22232 22 346677777 6677888888988777755
Q ss_pred c-ccchhhhhccC-cCCcceEEEEecCCCCeEEE----eeCCCcEEEEEecCCc
Q psy18231 446 A-TGELLEEYKGH-KSGDFRIECCLDSKDSQIFC----GSSDGKIYKWQLVDSS 493 (540)
Q Consensus 446 ~-~~~~~~~~~~~-~~~v~~~~~~~s~~~~~l~s----~s~dg~i~iwd~~~~~ 493 (540)
. +++.+..+..+ ...+..+ .++|+++.|+. ....++|++||+.+++
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~--~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGL--SGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEE--ECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eCCCCceeeccCCCCeEEEEe--ecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 4 35444555432 3334444 78899887662 3345789999988775
No 208
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.55 E-value=1.3e-11 Score=113.78 Aligned_cols=236 Identities=13% Similarity=0.082 Sum_probs=165.9
Q ss_pred ecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEe-ccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCC
Q psy18231 203 GGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRR-WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 203 ~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 281 (540)
..+...+.++++.++|+++++...++.|.+||.. ++.... ...+...+..+++++++.+.++...++.|..||.. ++
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence 3455789999999999988877778999999987 554332 22345779999999999988877767889988864 22
Q ss_pred CCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccc
Q psy18231 282 HHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDV 361 (540)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (540)
... .
T Consensus 89 ~~~-~--------------------------------------------------------------------------- 92 (299)
T 2z2n_A 89 IKE-Y--------------------------------------------------------------------------- 92 (299)
T ss_dssp EEE-E---------------------------------------------------------------------------
T ss_pred EEE-E---------------------------------------------------------------------------
Confidence 000 0
Q ss_pred cccccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEee-e--CCceEEEEEecCCcEEEeecC
Q psy18231 362 TPISIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDY-V--GEPIVDACFTRDCQCILTCST 436 (540)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~-~--~~~i~~~~~sp~~~~l~~~~~ 436 (540)
.+......+.++++++ .++++...++.|..||. +++..... . ...+..++++++|+++++...
T Consensus 93 -----------~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 160 (299)
T 2z2n_A 93 -----------TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ 160 (299)
T ss_dssp -----------ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred -----------eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC
Confidence 0001223567788877 44444556789999998 55443222 2 256899999999988888777
Q ss_pred CCeEEEEeccccchhhh-hccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCC
Q psy18231 437 DECLRLFDKATGELLEE-YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 515 (540)
Q Consensus 437 dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d 515 (540)
++.|..||. +++.... +..+...+..+ +++++|++.++...++.|.+||. +++.. .+....+...+.+++++++
T Consensus 161 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i--~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 161 NNAIGRITE-SGDITEFKIPTPASGPVGI--TKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGAG 235 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEE--EECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECST
T ss_pred CCEEEEEcC-CCcEEEeeCCCCCCcceeE--EECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECCC
Confidence 889999998 6654321 22222333444 88999987777777889999998 66543 3432245567899999999
Q ss_pred CcEEEeec-CCeeEEEEcc
Q psy18231 516 RKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 516 ~~~l~s~~-d~~i~iw~~~ 533 (540)
|+++++.. ++.|..|+..
T Consensus 236 g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 236 IDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp TCEEEEETTTTEEEEEETT
T ss_pred CCEEEeccCCceEEEECCC
Confidence 99887776 8899999874
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.52 E-value=1e-11 Score=119.47 Aligned_cols=234 Identities=12% Similarity=0.069 Sum_probs=159.6
Q ss_pred cceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCC--cEEEEEecCCCCCC
Q psy18231 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMWDVKSRSHHP 284 (540)
Q Consensus 207 ~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~ 284 (540)
.....++|+++++++++...++.|++||..+++....... ..... ++|+++++.|+++..++ .|.+|+........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 3578899999999888888889999999987776554443 33334 99999999998888766 67777765543100
Q ss_pred cchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccc
Q psy18231 285 IQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPI 364 (540)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (540)
.. ..
T Consensus 209 ~~------------------------------------------------------------------------g~---- 212 (409)
T 3hrp_A 209 RI------------------------------------------------------------------------GQ---- 212 (409)
T ss_dssp EE------------------------------------------------------------------------EE----
T ss_pred Ee------------------------------------------------------------------------ee----
Confidence 00 00
Q ss_pred ccccchhhhhhcccccEEEEEecC--CeeEeeeCCCeEEEEeCCCCceEEe----eeC-Cc---eEEEEEec-CCcEEEe
Q psy18231 365 SIHNSCFQALKEARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTD----YVG-EP---IVDACFTR-DCQCILT 433 (540)
Q Consensus 365 ~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~----~~~-~~---i~~~~~sp-~~~~l~~ 433 (540)
........+.+++++| ..|+++..++.|+.||..++..... ..+ .. ...++|+| ++.++++
T Consensus 213 --------~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 213 --------LGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp --------CCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred --------ccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 0000223456677877 5666677788999999987764322 111 11 23999999 5677777
Q ss_pred ecCCCeEEEEeccccchhhhhccCc---------------CCcceEEEEecCCCCeEEEee-CCCcEEEEEecCCcceeE
Q psy18231 434 CSTDECLRLFDKATGELLEEYKGHK---------------SGDFRIECCLDSKDSQIFCGS-SDGKIYKWQLVDSSQIST 497 (540)
Q Consensus 434 ~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~v~~~~~~~s~~~~~l~s~s-~dg~i~iwd~~~~~~~~~ 497 (540)
-..++.|+.||.... +..+.++. ..... ++++++|+++++-+ .++.|+.|++.+++. .+
T Consensus 285 d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~g--ia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~ 359 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNG--MTVDEDGNFYIVDGFKGYCLRKLDILDGYV-ST 359 (409)
T ss_dssp ETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEE--EEECTTCCEEEEETTTTCEEEEEETTTTEE-EE
T ss_pred eCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeE--EEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EE
Confidence 777899999997532 22222221 11233 48999999777777 889999999877764 33
Q ss_pred EEeccc---------------ceeeeEEEEcCCCcEEEeec-CCeeEEEEcc
Q psy18231 498 LIHSVG---------------KAVVNSLCSHPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 498 ~~~~~~---------------~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
+. ++ -.....++++++|.++++-. ++.|+.++++
T Consensus 360 ~~--g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 360 VA--GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EE--ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred Ee--CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 33 22 24588999999988888877 8899988764
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=6e-12 Score=121.07 Aligned_cols=235 Identities=13% Similarity=0.117 Sum_probs=160.1
Q ss_pred ecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCC--eEEEEEcCCCcee
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK--SVILWEVTTGQPV 241 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg--~i~iwd~~~~~~~ 241 (540)
......++|+++++++++...++.|++||..++........ ..... ++|+|+++.|+++..++ .|.+|+...+...
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 35688999999999777777789999999988876655554 33334 99999999998888766 7999998776554
Q ss_pred Eec----cccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccccc
Q psy18231 242 RRW----REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317 (540)
Q Consensus 242 ~~~----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (540)
..+ ......+.+++++|++..|+.+..++.|..||..+.......
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~------------------------------- 256 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIK------------------------------- 256 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEE-------------------------------
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEe-------------------------------
Confidence 433 224567889999995555555777889999998765410000
Q ss_pred CceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccc--cEEEEEecC--C-eeE
Q psy18231 318 GLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARD--SITSVHVSD--H-EIL 392 (540)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~l~~~~--~-~l~ 392 (540)
. . ...++.. +...++++| . +++
T Consensus 257 ---------------------------------~-~-------------------~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 257 ---------------------------------Q-L-------------------ELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp ---------------------------------E-C-------------------CCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred ---------------------------------c-c-------------------cccCCCCCCccccEEEeCCCCEEEE
Confidence 0 0 0000001 112677776 3 444
Q ss_pred eeeCCCeEEEEeCCCCceEEeeeC-----------------CceEEEEEecCCcEEEeec-CCCeEEEEeccccchhhhh
Q psy18231 393 TASLDCRIRRYDIRTGNLVTDYVG-----------------EPIVDACFTRDCQCILTCS-TDECLRLFDKATGELLEEY 454 (540)
Q Consensus 393 ~~~~dg~i~iwd~~~~~~~~~~~~-----------------~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~ 454 (540)
+-..++.|+.|+.... +..+.+ .....++++|+|+++++-. .++.|+.||+.+++. .++
T Consensus 284 ~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~ 360 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STV 360 (409)
T ss_dssp EETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEE
T ss_pred EeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEE
Confidence 5566788999987643 222221 2378999999999888877 889999999877753 333
Q ss_pred ccC---------------cCCcceEEEEecCCCCeEEEeeCCCcEEEEEe
Q psy18231 455 KGH---------------KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489 (540)
Q Consensus 455 ~~~---------------~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~ 489 (540)
.++ -.....+ +++++|.++++-..++.|+.+++
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~gi--avd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDI--CYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEE--EECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCCCCcCCCChhceEeCCceEE--EEcCCCCEEEEECCCCeEEEEEe
Confidence 332 1123334 88999888888888888888775
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=1.1e-12 Score=123.66 Aligned_cols=258 Identities=10% Similarity=0.030 Sum_probs=163.9
Q ss_pred cCeEEEEeCCCCCEEEEee--CCCcEEEEcCCCCeeEEEe-------ecCCcceeEEEEeeCCCeEEEeeC-----CCeE
Q psy18231 165 SGLMHTRFPVDGSYCLTCG--SDKKIKLWNPYRNLLLKTY-------GGHAHEVNDATAACDSSQIASGAS-----DKSV 230 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~--~dg~i~iwd~~~~~~~~~~-------~~h~~~v~~l~~sp~~~~l~s~s~-----dg~i 230 (540)
.....++++|+|+++++.. .++.++||.+.+++. ..+ ..|...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5789999999999988864 234355665545543 322 134568899999999887666544 5789
Q ss_pred EEEEcCCCceeEeccc------cCCceeEEEECCCCCEE-EEec---CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCc
Q psy18231 231 ILWEVTTGQPVRRWRE------HASKVTCVKFNEDSSVV-ISGS---QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDS 300 (540)
Q Consensus 231 ~iwd~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l-~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 300 (540)
.+||+.+++.+..+.. +...+..+++++++..+ ++-. .++.|.+||+.+++....
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~--------------- 160 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV--------------- 160 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE---------------
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE---------------
Confidence 9999999987665542 23457899999865444 4544 578899999887652100
Q ss_pred eeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhccc--
Q psy18231 301 ITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEAR-- 378 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 378 (540)
+..|.
T Consensus 161 -------------------------------------------------------------------------~~~~~~~ 167 (343)
T 2qe8_A 161 -------------------------------------------------------------------------LQGYPGI 167 (343)
T ss_dssp -------------------------------------------------------------------------CTTCTTT
T ss_pred -------------------------------------------------------------------------ecCCCcc
Confidence 00000
Q ss_pred --ccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCCC-eEEEEeccc--------
Q psy18231 379 --DSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDE-CLRLFDKAT-------- 447 (540)
Q Consensus 379 --~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg-~i~i~d~~~-------- 447 (540)
.. ..+.+....+.+.+.++.++.|. ..+..++|+|+|+.|+.+..++ .+..++...
T Consensus 168 ~~~~-~~~~~~g~~~~~~~~~g~~~~~~------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~ 234 (343)
T 2qe8_A 168 APED-IDLVIDGVPVQIGQPDGTVIRPH------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTD 234 (343)
T ss_dssp SCCS-CCCEETTEECBEECTTSCEECCC------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCH
T ss_pred cccc-cceeECCEEEEeccCCCceecee------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCCh
Confidence 00 01111223344555666665553 2467899999999888877665 555555321
Q ss_pred cchhhhhc--cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-C
Q psy18231 448 GELLEEYK--GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-G 524 (540)
Q Consensus 448 ~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d 524 (540)
.+....+. ++......+ +++++|.++++...++.|.+||..+++....... .+...+.+++|.++++++++.+ .
T Consensus 235 ~~~~~~~~~~g~~g~pdgi--a~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~-~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 235 AELGSKIERYSEKPICDGI--SIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD-EKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp HHHHTTCEEEEECCSCSCE--EECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-GGGSCEEEEEECTTSCEEEEECCG
T ss_pred hhhhcceEecccCCCCceE--EECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC-CceecCCeeEECCCCcEEEEeCcc
Confidence 11111111 233333445 8999999999999999999999756764333321 2345689999999999888876 4
Q ss_pred Cee
Q psy18231 525 NNV 527 (540)
Q Consensus 525 ~~i 527 (540)
+.+
T Consensus 312 ~~~ 314 (343)
T 2qe8_A 312 HHS 314 (343)
T ss_dssp GGS
T ss_pred ccc
Confidence 433
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.49 E-value=6.7e-12 Score=119.38 Aligned_cols=260 Identities=10% Similarity=0.024 Sum_probs=173.0
Q ss_pred ceeeeeccccccee--eeeecCeEEEEeCCCCCEEEEee----------CCCcEEEEcCCCCeeEEEeecC-------Cc
Q psy18231 147 WSIRVYRPLTVNRE--LFVLSGLMHTRFPVDGSYCLTCG----------SDKKIKLWNPYRNLLLKTYGGH-------AH 207 (540)
Q Consensus 147 ~~i~~~~~~~~~~~--~~h~~~v~~v~~spdg~~lat~~----------~dg~i~iwd~~~~~~~~~~~~h-------~~ 207 (540)
..|.+++..+.... +.-...- .++++|||++|+++. .++.|.++|..+++.+.++.-. ..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~ 177 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGT 177 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCC
Confidence 67888887775432 2122223 899999999988775 3678999999999998887532 23
Q ss_pred ceeEEEEeeCCCeEEEeeC--CCeEEEEEcCCCceeEeccccCCceeEEEECCCC-CEEEEecCCCcEEEEEecCCCCCC
Q psy18231 208 EVNDATAACDSSQIASGAS--DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS-SVVISGSQDNTVMMWDVKSRSHHP 284 (540)
Q Consensus 208 ~v~~l~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~ 284 (540)
....+.|+|||++|+.+.. ++.|.+.|+.+++.+..+.-... ....|++ ..+++.+.||.+.+.++.+++...
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~ 253 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKV 253 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEE
T ss_pred CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEE
Confidence 4567899999999998874 57899999999998887753211 2333433 556667778888888874443100
Q ss_pred cchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccccc
Q psy18231 285 IQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPI 364 (540)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (540)
.. . .
T Consensus 254 ~~------------------------------------------------------------------~---~------- 257 (426)
T 3c75_H 254 TN------------------------------------------------------------------T---E------- 257 (426)
T ss_dssp EE------------------------------------------------------------------C---C-------
T ss_pred Ee------------------------------------------------------------------e---e-------
Confidence 00 0 0
Q ss_pred ccccchhhhhhcccccE-EEEEecC--CeeEeeeCCCeEEEEeCCCCceE--Eeee------------CCceEEEEEecC
Q psy18231 365 SIHNSCFQALKEARDSI-TSVHVSD--HEILTASLDCRIRRYDIRTGNLV--TDYV------------GEPIVDACFTRD 427 (540)
Q Consensus 365 ~~~~~~~~~~~~~~~~v-~~l~~~~--~~l~~~~~dg~i~iwd~~~~~~~--~~~~------------~~~i~~~~~sp~ 427 (540)
.+.....++ ..+.+.+ ..++..+..+.+.+.|+...... ..+. ......++++|+
T Consensus 258 --------~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~d 329 (426)
T 3c75_H 258 --------VFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQ 329 (426)
T ss_dssp --------CCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGG
T ss_pred --------eeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCC
Confidence 000000000 0122333 44445556788888888655421 1111 112233789999
Q ss_pred CcEEEeecC----------CCeEEEEeccccchhhhhccCcCCcceEEEEecCCCC-eEEEee-CCCcEEEEEecCCcce
Q psy18231 428 CQCILTCST----------DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS-QIFCGS-SDGKIYKWQLVDSSQI 495 (540)
Q Consensus 428 ~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~s~s-~dg~i~iwd~~~~~~~ 495 (540)
++.+++... ++.|.++|..+.+.+.++..... ...+ +|+|||+ ++++.. .++.|.++|+.+++.+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~-P~gi--a~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE-IDSI--NVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE-ECEE--EECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC-cCeE--EEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 887777642 35799999999999988865432 3445 8999999 888887 5999999999999999
Q ss_pred eEE
Q psy18231 496 STL 498 (540)
Q Consensus 496 ~~~ 498 (540)
.++
T Consensus 407 ~tI 409 (426)
T 3c75_H 407 RSV 409 (426)
T ss_dssp EEE
T ss_pred EEe
Confidence 887
No 213
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.49 E-value=4.3e-12 Score=130.02 Aligned_cols=264 Identities=11% Similarity=0.102 Sum_probs=169.0
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCeeEEEeecC-C----cceeEEEEeeCCCeEEEeeC------CCeEEEEEcCCCceeEe
Q psy18231 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH-A----HEVNDATAACDSSQIASGAS------DKSVILWEVTTGQPVRR 243 (540)
Q Consensus 175 dg~~lat~~~dg~i~iwd~~~~~~~~~~~~h-~----~~v~~l~~sp~~~~l~s~s~------dg~i~iwd~~~~~~~~~ 243 (540)
++..|++++.|+.|..+|..+|+.+.++..+ . ..+.+--...+ ..++.++. ++.|..+|..+|+.+..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 4567888888999999999999999988754 2 12222111124 45555543 69999999999998876
Q ss_pred ccccCC--------------------------------ceeEEEECCCCCEEEEecCCCc-------------------E
Q psy18231 244 WREHAS--------------------------------KVTCVKFNEDSSVVISGSQDNT-------------------V 272 (540)
Q Consensus 244 ~~~h~~--------------------------------~v~~~~~~~~~~~l~s~~~dg~-------------------i 272 (540)
+..... ....++++|++..++.++.++. |
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 643211 1135778888888887776643 4
Q ss_pred EEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeec
Q psy18231 273 MMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352 (540)
Q Consensus 273 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (540)
..+|.++++
T Consensus 286 ~AlD~~TG~----------------------------------------------------------------------- 294 (677)
T 1kb0_A 286 VALDPDTGK----------------------------------------------------------------------- 294 (677)
T ss_dssp EEECTTTCC-----------------------------------------------------------------------
T ss_pred EEEECCCCC-----------------------------------------------------------------------
Confidence 444444443
Q ss_pred ccceecccccccccccchhhhhhcccc-cEEEEEecC---CeeEeeeCCCeEEEEeCCCCceEEeeeCCc----------
Q psy18231 353 LGSTQIGDVTPISIHNSCFQALKEARD-SITSVHVSD---HEILTASLDCRIRRYDIRTGNLVTDYVGEP---------- 418 (540)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------- 418 (540)
..|......... ........ .+....... ..+++++.+|.++++|.++++.+..+.-.+
T Consensus 295 ----~~W~~~~~~~d~---wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~ 367 (677)
T 1kb0_A 295 ----YKWHYQETPGDN---WDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKH 367 (677)
T ss_dssp ----EEEEEESSTTCC---SCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTT
T ss_pred ----EEEEEecCCCcc---cccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCC
Confidence 111111000000 00000011 112222233 568889999999999999999886654211
Q ss_pred ---e------------------------EEEEEecCCcEEEeecC-----------------------------------
Q psy18231 419 ---I------------------------VDACFTRDCQCILTCST----------------------------------- 436 (540)
Q Consensus 419 ---i------------------------~~~~~sp~~~~l~~~~~----------------------------------- 436 (540)
+ ..++++|++.++++...
T Consensus 368 g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 447 (677)
T 1kb0_A 368 GKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFN 447 (677)
T ss_dssp SCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEEC
T ss_pred CceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccc
Confidence 1 15688998888877543
Q ss_pred --------CCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeee
Q psy18231 437 --------DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVN 508 (540)
Q Consensus 437 --------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 508 (540)
.|.|..||+.+++.+.++... .+.... .+..++..++.++.||.+++||..+++.+..+.. ++.....
T Consensus 448 ~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g--~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~-~~~~~~~ 523 (677)
T 1kb0_A 448 AEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGG--TLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT-GTGVVAA 523 (677)
T ss_dssp SSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCC--EEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC-SSCCCSC
T ss_pred cccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCc--ceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC-CCCcccC
Confidence 278999999999988776543 233333 4556778899999999999999999999999984 2333334
Q ss_pred EEEEcCCCcEEEe
Q psy18231 509 SLCSHPTRKHIMS 521 (540)
Q Consensus 509 ~l~~s~d~~~l~s 521 (540)
-+.|.++|+.+++
T Consensus 524 p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 524 PSTYMVDGRQYVS 536 (677)
T ss_dssp CEEEEETTEEEEE
T ss_pred CEEEEeCCEEEEE
Confidence 4566788865544
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.48 E-value=9.3e-13 Score=123.49 Aligned_cols=168 Identities=11% Similarity=0.086 Sum_probs=134.7
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe-----------eEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEE
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL-----------LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~-----------~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd 234 (540)
+++.+++++...++++|+.+ .+.+|++++.+ ..... .+.. |+.++| |+++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68999999999999999987 55569865332 11223 3566 999999 89999999 889999999
Q ss_pred cCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccc
Q psy18231 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNH 314 (540)
Q Consensus 235 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (540)
+.+.........|...+.++.+.+. .+++++.||.|.+||+.++..
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~-------------------------------- 158 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST-------------------------------- 158 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE--------------------------------
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc--------------------------------
Confidence 9887766667778888998888764 388889999999999987651
Q ss_pred cccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEee
Q psy18231 315 LSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTA 394 (540)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~ 394 (540)
..+...|++++|+|+-++.|
T Consensus 159 ------------------------------------------------------------~~~~~~Vs~v~WSpkG~~vg 178 (388)
T 1xip_A 159 ------------------------------------------------------------KQLAQNVTSFDVTNSQLAVL 178 (388)
T ss_dssp ------------------------------------------------------------EEEEESEEEEEECSSEEEEE
T ss_pred ------------------------------------------------------------ccccCCceEEEEcCCceEEE
Confidence 01345799999999668999
Q ss_pred eCCCeEEEEeCCCCce--EEee------e-----CCceEEEEEecCCcEEEe
Q psy18231 395 SLDCRIRRYDIRTGNL--VTDY------V-----GEPIVDACFTRDCQCILT 433 (540)
Q Consensus 395 ~~dg~i~iwd~~~~~~--~~~~------~-----~~~i~~~~~sp~~~~l~~ 433 (540)
..||++++|+...++. ..++ . ...|.++.|.+++.++++
T Consensus 179 ~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999999999987775 5555 2 357999999999999887
No 215
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.48 E-value=2.5e-11 Score=116.06 Aligned_cols=266 Identities=11% Similarity=0.073 Sum_probs=168.2
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCce---
Q psy18231 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV--- 251 (540)
Q Consensus 175 dg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v--- 251 (540)
++..+++++.++.|..+|..+++.+................ +..++.++.++.|..+|..+|+.+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 45577888889999999999999988776543322222232 4578888899999999999999887765432211
Q ss_pred --eEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeee
Q psy18231 252 --TCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRC 329 (540)
Q Consensus 252 --~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (540)
...... +..++.++.++.+..+|..+++..-.. ..
T Consensus 180 ~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~-----------------------------------------~~ 216 (376)
T 3q7m_A 180 GESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQ-----------------------------------------RI 216 (376)
T ss_dssp CCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEE-----------------------------------------EC
T ss_pred CCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEE-----------------------------------------ec
Confidence 111222 446788888999999999887621000 00
Q ss_pred cccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCc
Q psy18231 330 KYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGN 409 (540)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~ 409 (540)
... .+... ...+.. ...........+++++.++.+..+|.++++
T Consensus 217 ~~~--------------------~~~~~-------------~~~~~~---~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~ 260 (376)
T 3q7m_A 217 SQA--------------------TGSTE-------------IDRLSD---VDTTPVVVNGVVFALAYNGNLTALDLRSGQ 260 (376)
T ss_dssp CC--------------------------------------------C---CCCCCEEETTEEEEECTTSCEEEEETTTCC
T ss_pred ccC--------------------CCCcc-------------cccccc---cCCCcEEECCEEEEEecCcEEEEEECCCCc
Confidence 000 00000 000000 000011234677888889999999999999
Q ss_pred eEEeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccC-cCCcceEEEEecCCCCeEEEeeCCCcEEEEE
Q psy18231 410 LVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH-KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488 (540)
Q Consensus 410 ~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd 488 (540)
.+..........+.. ++..+++++.++.+..+|..+++.+...... ....... .. .+..|+.++.+|.|+++|
T Consensus 261 ~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~--~~--~~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 261 IMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSP--VL--YNGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp EEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCC--EE--ETTEEEEECTTSEEEEEE
T ss_pred EEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCC--EE--ECCEEEEEeCCCeEEEEE
Confidence 887776555555444 4567777888999999999999876555421 1122222 12 356888999999999999
Q ss_pred ecCCcceeEEEecccceeee-EEEEcCCCcEEEeec-CCeeEEEE
Q psy18231 489 LVDSSQISTLIHSVGKAVVN-SLCSHPTRKHIMSAC-GNNVKLWT 531 (540)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~v~-~l~~s~d~~~l~s~~-d~~i~iw~ 531 (540)
..+++.+.... .....+. .... .+ ..|+.++ +|.|..|+
T Consensus 335 ~~tG~~~~~~~--~~~~~~~~~~~~-~~-~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 335 VEDGRFVAQQK--VDSSGFQTEPVA-AD-GKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTTCCEEEEEE--CCTTCBCSCCEE-ET-TEEEEEBTTSCEEEEE
T ss_pred CCCCcEEEEEe--cCCCcceeCCEE-EC-CEEEEEeCCCEEEEEe
Confidence 99999888776 3222222 2222 24 4556666 99999887
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.46 E-value=3.9e-11 Score=110.47 Aligned_cols=226 Identities=12% Similarity=0.130 Sum_probs=145.9
Q ss_pred CCcceeEEEEeeC-CCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCC
Q psy18231 205 HAHEVNDATAACD-SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 283 (540)
Q Consensus 205 h~~~v~~l~~sp~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 283 (540)
+..--.+..|+|+ +.++++...++.|..||..+++.. .+ .....+.+++++++++++++ . ++.|.+||..+++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 3445568899995 455666677899999999877653 23 34578999999999995554 3 567999998765411
Q ss_pred CcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccc
Q psy18231 284 PIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTP 363 (540)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (540)
.+. ..
T Consensus 87 ~~~----------------------------------------------------------------~~----------- 91 (297)
T 3g4e_A 87 VLA----------------------------------------------------------------TV----------- 91 (297)
T ss_dssp EEE----------------------------------------------------------------EC-----------
T ss_pred EEE----------------------------------------------------------------ec-----------
Confidence 000 00
Q ss_pred cccccchhhhhhcccccEEEEEecC-CeeEeee------------CCCeEEEEeCCCCceEEeeeC-CceEEEEEecCCc
Q psy18231 364 ISIHNSCFQALKEARDSITSVHVSD-HEILTAS------------LDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQ 429 (540)
Q Consensus 364 ~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~ 429 (540)
........+..+++++ ..+..++ ..+.|..+|.. ++....... ...+.++|+|+++
T Consensus 92 ---------~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 92 ---------DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp ---------CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSC
T ss_pred ---------CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCC
Confidence 0000123456777777 3344433 12344444443 333222222 4578899999998
Q ss_pred EEE-eecCCCeEEEEec--cccch-----hhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEec
Q psy18231 430 CIL-TCSTDECLRLFDK--ATGEL-----LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS 501 (540)
Q Consensus 430 ~l~-~~~~dg~i~i~d~--~~~~~-----~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 501 (540)
.|+ +.+.++.|.+||+ .++.. ...+..+......+ +++++|++.++...++.|..||..+++.+..+.
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~--~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~-- 237 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGM--CIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK-- 237 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEE--EEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE--
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCee--EECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE--
Confidence 664 5556789999987 34432 22222222333444 789999888887778899999988899998888
Q ss_pred ccceeeeEEEEc-CCCcEEEeec
Q psy18231 502 VGKAVVNSLCSH-PTRKHIMSAC 523 (540)
Q Consensus 502 ~~~~~v~~l~~s-~d~~~l~s~~ 523 (540)
.+...+++++|. ||++.|..++
T Consensus 238 ~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 238 LPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCCceEEEEeCCCCCEEEEEc
Confidence 566779999998 8887665443
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=7e-13 Score=124.32 Aligned_cols=171 Identities=12% Similarity=0.140 Sum_probs=127.9
Q ss_pred ceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc-----------eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEE
Q psy18231 208 EVNDATAACDSSQIASGASDKSVILWEVTTGQ-----------PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276 (540)
Q Consensus 208 ~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~-----------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 276 (540)
.+..+++++...++++|+.++ +.+|++.+.+ ... ...+.+ |+.++| |+++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999999999999985 5669976443 112 224566 999999 88999998 889999999
Q ss_pred ecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccce
Q psy18231 277 VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
+.+.....
T Consensus 113 v~sl~~~~------------------------------------------------------------------------ 120 (388)
T 1xip_A 113 LEELSEFR------------------------------------------------------------------------ 120 (388)
T ss_dssp SSSTTCEE------------------------------------------------------------------------
T ss_pred chhhhccC------------------------------------------------------------------------
Confidence 98765200
Q ss_pred ecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecC
Q psy18231 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCST 436 (540)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~ 436 (540)
....|...+.++.+.+..+++++.||.|.+||+.++.... ....|++++|||+| ++.|..
T Consensus 121 ----------------~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~--~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 121 ----------------TVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ--LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp ----------------EEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE--EEESEEEEEECSSE--EEEEET
T ss_pred ----------------ccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc--ccCCceEEEEcCCc--eEEEEc
Confidence 1122334456666666558899999999999999887654 34689999999999 678899
Q ss_pred CCeEEEEeccccch--hhhh------c---cCcCCcceEEEEecCCCCeEEEe
Q psy18231 437 DECLRLFDKATGEL--LEEY------K---GHKSGDFRIECCLDSKDSQIFCG 478 (540)
Q Consensus 437 dg~i~i~d~~~~~~--~~~~------~---~~~~~v~~~~~~~s~~~~~l~s~ 478 (540)
||.+++|+...++. .+++ . +|...|.++ .|.+++.++++-
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI--~wl~~~~flv~y 231 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSV--TILSPQDFLAVF 231 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEE--EESSSSEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEE--EEecCCeEEEEE
Confidence 99999998876664 3333 2 355555555 899999998863
No 218
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.45 E-value=8.9e-12 Score=127.98 Aligned_cols=264 Identities=9% Similarity=0.066 Sum_probs=166.1
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCeeEEEeecC--CcceeEEEEee---CCCeEEEee------CCCeEEEEEcCCCceeEe
Q psy18231 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH--AHEVNDATAAC---DSSQIASGA------SDKSVILWEVTTGQPVRR 243 (540)
Q Consensus 175 dg~~lat~~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~l~~sp---~~~~l~s~s------~dg~i~iwd~~~~~~~~~ 243 (540)
++..|++++.|+.|..+|..+|+.+.++... ......+..+| ++. ++.++ .+|.|..||..+|+.+..
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 4567888889999999999999999887642 11111111122 454 44443 368999999999998876
Q ss_pred cccc-------------------------------CCceeEEEECCCCCEEEEecCCCc-------------------EE
Q psy18231 244 WREH-------------------------------ASKVTCVKFNEDSSVVISGSQDNT-------------------VM 273 (540)
Q Consensus 244 ~~~h-------------------------------~~~v~~~~~~~~~~~l~s~~~dg~-------------------i~ 273 (540)
+... ......++++|+..+++.++.++. |.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 5421 011125778888888888877764 55
Q ss_pred EEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecc
Q psy18231 274 MWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFL 353 (540)
Q Consensus 274 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (540)
.||.++++.
T Consensus 279 AlD~~TG~~----------------------------------------------------------------------- 287 (689)
T 1yiq_A 279 AVNADTGEY----------------------------------------------------------------------- 287 (689)
T ss_dssp EEETTTCCE-----------------------------------------------------------------------
T ss_pred EEEccCCce-----------------------------------------------------------------------
Confidence 555554441
Q ss_pred cceecccccccccccchhhhhhcccc-cEEEEEecC---CeeEeeeCCCeEEEEeCCCCceEEeeeCC------------
Q psy18231 354 GSTQIGDVTPISIHNSCFQALKEARD-SITSVHVSD---HEILTASLDCRIRRYDIRTGNLVTDYVGE------------ 417 (540)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~l~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------ 417 (540)
.|........ ......... .+..+.+.. ..++.++.+|.++++|.++++.+....-.
T Consensus 288 ----~W~~~~~~~d---~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 288 ----VWHYQTTPGD---AWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ----EEEEESSTTC---CSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred ----eEeeecCCcc---cccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 1111100000 000000000 111223333 36888999999999999999987433211
Q ss_pred -----------------------------ceEEEEEecCCcEEEeecC--------------------------------
Q psy18231 418 -----------------------------PIVDACFTRDCQCILTCST-------------------------------- 436 (540)
Q Consensus 418 -----------------------------~i~~~~~sp~~~~l~~~~~-------------------------------- 436 (540)
.-..++|+|+..++++...
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 0113788998877776521
Q ss_pred -------------CCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEeccc
Q psy18231 437 -------------DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 503 (540)
Q Consensus 437 -------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 503 (540)
+|.|+.||+.+++.+.++..+... ... .++..+.+++.|+.||.|+.||.++|+.+.+++. ++
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~-~~g--~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~-~~ 516 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIF-NGG--TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA-AS 516 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSC-CCC--EEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC-SS
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCc-cCc--cceECCCEEEEECCCCcEEEEECCCCccceeeeC-CC
Confidence 378999999999988777655432 222 3556778999999999999999999999998874 22
Q ss_pred ceeeeEEEEcCCCcEEEe
Q psy18231 504 KAVVNSLCSHPTRKHIMS 521 (540)
Q Consensus 504 ~~~v~~l~~s~d~~~l~s 521 (540)
.....-+.|+.+|+..++
T Consensus 517 ~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CCCSCCEEEEETTEEEEE
T ss_pred CcccCceEEEECCEEEEE
Confidence 222344667788875443
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.45 E-value=5.4e-12 Score=130.57 Aligned_cols=238 Identities=13% Similarity=0.111 Sum_probs=150.0
Q ss_pred eecCeEEEEeCCCCCEEEE-----eeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCC---------
Q psy18231 163 VLSGLMHTRFPVDGSYCLT-----CGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK--------- 228 (540)
Q Consensus 163 h~~~v~~v~~spdg~~lat-----~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg--------- 228 (540)
|...+..++|||||++||- |+...+|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 5567889999999999984 3333689999999998655311 11223678999 999999888774
Q ss_pred ----eEEEEEcCCCc----eeEeccc-cCCceeEEEECCCCCEEEEecC----CCcEEEEEecCCCCCCcchhhhhHhhh
Q psy18231 229 ----SVILWEVTTGQ----PVRRWRE-HASKVTCVKFNEDSSVVISGSQ----DNTVMMWDVKSRSHHPIQVRCLNEALK 295 (540)
Q Consensus 229 ----~i~iwd~~~~~----~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~ 295 (540)
.|.+|++.++. .+..... |...+..+.|+|||++|+.... +..|.++|+.++.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~---------- 274 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL---------- 274 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE----------
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE----------
Confidence 39999998764 3333334 5556788999999998764432 34789999876531111
Q ss_pred hcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhh
Q psy18231 296 EARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALK 375 (540)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (540)
.+.
T Consensus 275 -----------------------------------------------------------------------------~l~ 277 (693)
T 3iuj_A 275 -----------------------------------------------------------------------------TVQ 277 (693)
T ss_dssp -----------------------------------------------------------------------------EEE
T ss_pred -----------------------------------------------------------------------------EEe
Confidence 111
Q ss_pred cccccEEE-EEecCCe-eEeeeC---CCeEEEEeCCCCce--EEeeeC--CceEEEEEecCCcEEEeecCCC---eEEEE
Q psy18231 376 EARDSITS-VHVSDHE-ILTASL---DCRIRRYDIRTGNL--VTDYVG--EPIVDACFTRDCQCILTCSTDE---CLRLF 443 (540)
Q Consensus 376 ~~~~~v~~-l~~~~~~-l~~~~~---dg~i~iwd~~~~~~--~~~~~~--~~i~~~~~sp~~~~l~~~~~dg---~i~i~ 443 (540)
.+...... +....+. ++++.. .+.|..+|+.++.. ...+.. ..+. .|+++++.|+....++ .|++|
T Consensus 278 ~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 278 GDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 11122222 1222233 333333 36899999987654 223332 3333 8999998887766543 68999
Q ss_pred eccccchhhhhcc-CcCCcceEEEEecCCCCeEEEeeCC----CcEEEEEecCCcc
Q psy18231 444 DKATGELLEEYKG-HKSGDFRIECCLDSKDSQIFCGSSD----GKIYKWQLVDSSQ 494 (540)
Q Consensus 444 d~~~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~s~s~d----g~i~iwd~~~~~~ 494 (540)
|+..+. ...+.. ....+..+ .++++++.|+....+ ++|+.||+.+++.
T Consensus 356 d~~g~~-~~~l~~p~~~~~~~~--~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 356 DYEGKR-VREVALPGLGSVSGF--NGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CTTSCE-EEEECCSSSSEEEEC--CCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCCCe-eEEeecCCCceEEee--ecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 987543 333322 22223333 667888876665544 7899999877653
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.44 E-value=1e-11 Score=116.31 Aligned_cols=244 Identities=9% Similarity=0.009 Sum_probs=164.0
Q ss_pred cEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEee----------CCCeEEEEEcCCCceeEecccc-------CC
Q psy18231 187 KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA----------SDKSVILWEVTTGQPVRRWREH-------AS 249 (540)
Q Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~h-------~~ 249 (540)
+|.++|..+++.+.++..-..+ .+.++||+++++.+. .++.|.+||+.+++.+..+.-+ ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999999765555 799999999998886 3689999999999999887643 13
Q ss_pred ceeEEEECCCCCEEEEecC--CCcEEE--EEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEE
Q psy18231 250 KVTCVKFNEDSSVVISGSQ--DNTVMM--WDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVF 325 (540)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (540)
....++++|||++++++.. +..+.+ +|+.+ . ..+.
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-v-~~i~--------------------------------------- 163 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-D-QLTK--------------------------------------- 163 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-E-EEEE---------------------------------------
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-c-eEEE---------------------------------------
Confidence 4678999999999998864 356888 77654 1 0000
Q ss_pred eeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-CeeEeeeCCCeEEEEe
Q psy18231 326 AFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-HEILTASLDCRIRRYD 404 (540)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~dg~i~iwd 404 (540)
. .+. ..+.... ..+++.+.||.+.+.|
T Consensus 164 ------------------------------------------------v---~~~-~~~~p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 164 ------------------------------------------------S---ASC-FHIHPGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp ------------------------------------------------C---SSC-CCCEEEETTEEECCCCTTSCEEEE
T ss_pred ------------------------------------------------C---CCc-eEEccCCCeEEEEEcCCCCEEEEE
Confidence 0 000 0011112 3455666788888888
Q ss_pred CCC-----CceEEe----e--eCCceEEEEEecCCcEEEeecCCCeEEEEeccccc--hhhhhcc----------CcCCc
Q psy18231 405 IRT-----GNLVTD----Y--VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGE--LLEEYKG----------HKSGD 461 (540)
Q Consensus 405 ~~~-----~~~~~~----~--~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~----------~~~~v 461 (540)
+++ ++.... + ...+. . ++++..++..+. +.+.+.|..+.. .+..+.. .....
T Consensus 192 ~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~ 266 (368)
T 1mda_H 192 LAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGF 266 (368)
T ss_dssp CCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSS
T ss_pred CccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcc
Confidence 876 443211 1 11333 3 666665555555 999999986532 2222211 01111
Q ss_pred ceEEEEecCCCCeEEEeeC---------CCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCc-EEEeec--CCeeEE
Q psy18231 462 FRIECCLDSKDSQIFCGSS---------DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMSAC--GNNVKL 529 (540)
Q Consensus 462 ~~~~~~~s~~~~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~s~~--d~~i~i 529 (540)
..+ ++++|++.++.+.. ++.+.++|+.+.+.+.++.. . .....++|+|||+ ++++.. +++|.+
T Consensus 267 ~~v--~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v--g-~~p~gi~~s~Dg~~l~va~~~~~~~VsV 341 (368)
T 1mda_H 267 QMV--AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN--G-HDSDAIIAAQDGASDNYANSAGTEVLDI 341 (368)
T ss_dssp SCE--EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE--E-EEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred eee--EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC--C-CCcceEEECCCCCEEEEEccCCCCeEEE
Confidence 123 78999998876543 23566999999999988873 2 3689999999997 444443 799999
Q ss_pred EEcccc
Q psy18231 530 WTAEED 535 (540)
Q Consensus 530 w~~~~~ 535 (540)
+|+.+.
T Consensus 342 ID~~t~ 347 (368)
T 1mda_H 342 YDAASD 347 (368)
T ss_dssp EESSSC
T ss_pred EECCCC
Confidence 999764
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.43 E-value=6.4e-11 Score=109.55 Aligned_cols=238 Identities=12% Similarity=0.060 Sum_probs=150.2
Q ss_pred eEEEeecCCcceeEEEEeeCCC-eEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEE
Q psy18231 198 LLKTYGGHAHEVNDATAACDSS-QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276 (540)
Q Consensus 198 ~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 276 (540)
.+..+...........|+|+++ ++++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|..|+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 3444444556677899999998 6677777899999997 454 345556677899999999999777666667899988
Q ss_pred ecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccce
Q psy18231 277 VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
.. ++..... ..
T Consensus 114 ~~-g~~~~~~----------------------~~---------------------------------------------- 124 (305)
T 3dr2_A 114 AD-GQAHLLV----------------------GR---------------------------------------------- 124 (305)
T ss_dssp TT-SCEEEEE----------------------CE----------------------------------------------
T ss_pred CC-CCEEEEE----------------------ec----------------------------------------------
Confidence 64 3310000 00
Q ss_pred ecccccccccccchhhhhhcccccEEEEEecC--CeeEe----eeC-------------CCeEEEEeCCCCceEEeeeCC
Q psy18231 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILT----ASL-------------DCRIRRYDIRTGNLVTDYVGE 417 (540)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~ 417 (540)
........+..+++++ .+.++ |.. .+.|..||..+++........
T Consensus 125 ----------------~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~ 188 (305)
T 3dr2_A 125 ----------------YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLD 188 (305)
T ss_dssp ----------------ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEES
T ss_pred ----------------cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCC
Confidence 0000011233455555 33332 221 356788887666544333334
Q ss_pred ceEEEEEecCCcEEEeecCC------CeEEEEeccccchhh---hh-ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEE
Q psy18231 418 PIVDACFTRDCQCILTCSTD------ECLRLFDKATGELLE---EY-KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487 (540)
Q Consensus 418 ~i~~~~~sp~~~~l~~~~~d------g~i~i~d~~~~~~~~---~~-~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iw 487 (540)
....++|+||++.|+.+... +.|++||+..+. +. .+ .........+ +++++|++. +++.+ .|.+|
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi--~~d~~G~lw-v~~~~-gv~~~ 263 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGF--CVDRGGWLW-SSSGT-GVCVF 263 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSE--EECTTSCEE-ECCSS-EEEEE
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeE--EECCCCCEE-EecCC-cEEEE
Confidence 57889999999988777665 789999987543 11 11 1112223345 788999844 44454 49999
Q ss_pred EecCCcceeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEE
Q psy18231 488 QLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWT 531 (540)
Q Consensus 488 d~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~ 531 (540)
+. +++.+..+. .+. .+.+++|+|+++.|..++.+.+..++
T Consensus 264 ~~-~g~~~~~~~--~~~-~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 264 DS-DGQLLGHIP--TPG-TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp CT-TSCEEEEEE--CSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred CC-CCCEEEEEE--CCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 96 688887776 333 58999999999888877734443333
No 222
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.40 E-value=7.9e-10 Score=101.81 Aligned_cols=229 Identities=11% Similarity=0.059 Sum_probs=155.1
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEE-EeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEe
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRR 243 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 243 (540)
..+.+++++++|++.++...++.|..||.. ++... .+......+.++++.++++++++...++.|..+|.. ++....
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEc
Confidence 568899999999987777667899999987 55432 222244678999999999988887778899999987 655432
Q ss_pred -ccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceee
Q psy18231 244 -WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTK 322 (540)
Q Consensus 244 -~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (540)
+......+..+++.+++++.++...++.|..+|. +++....
T Consensus 140 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~------------------------------------- 181 (300)
T 2qc5_A 140 DLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEY------------------------------------- 181 (300)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-------------------------------------
T ss_pred cCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEe-------------------------------------
Confidence 3334567899999999997776666788888887 3331000
Q ss_pred EEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-CeeEee-eCCCeE
Q psy18231 323 LVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-HEILTA-SLDCRI 400 (540)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~-~~dg~i 400 (540)
....+...+.++++++ ..+.++ ...+.|
T Consensus 182 --------------------------------------------------~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 211 (300)
T 2qc5_A 182 --------------------------------------------------PLPTNAAAPVGITSGNDGALWFVEIMGNKI 211 (300)
T ss_dssp --------------------------------------------------ECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred --------------------------------------------------eCCCCCCCcceEEECCCCCEEEEccCCCEE
Confidence 0011123566788876 344444 456789
Q ss_pred EEEeCCCCceEEe-ee--CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhh-hhccCcCCcceEEEEecCCCCeEE
Q psy18231 401 RRYDIRTGNLVTD-YV--GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLE-EYKGHKSGDFRIECCLDSKDSQIF 476 (540)
Q Consensus 401 ~iwd~~~~~~~~~-~~--~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~s~~~~~l~ 476 (540)
.+||. +++.... .. ...+.+++++++|++.++...++.|..||. +++... .+......+..+ +++++|++.+
T Consensus 212 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i--~~~~~g~l~v 287 (300)
T 2qc5_A 212 GRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGI--TFGKDGSVWF 287 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCE--EECTTSCEEE
T ss_pred EEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCcccee--EeCCCCCEEE
Confidence 99998 4544332 22 256889999999997777767799999998 443321 122223345556 7888888666
Q ss_pred EeeCCCcEEEEEe
Q psy18231 477 CGSSDGKIYKWQL 489 (540)
Q Consensus 477 s~s~dg~i~iwd~ 489 (540)
+.. . .|..+|.
T Consensus 288 ~~~-~-~i~~~~p 298 (300)
T 2qc5_A 288 ALK-C-KIGKLNL 298 (300)
T ss_dssp ECS-S-EEEEEEE
T ss_pred Ecc-C-ceEEeCC
Confidence 554 4 6777765
No 223
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.39 E-value=1.1e-10 Score=107.59 Aligned_cols=220 Identities=11% Similarity=0.125 Sum_probs=146.9
Q ss_pred eEEEEeCCCC-CEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEecc
Q psy18231 167 LMHTRFPVDG-SYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR 245 (540)
Q Consensus 167 v~~v~~spdg-~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (540)
.-+..|+|++ .++++...++.|..||..+++. ..+. ....+.+++++++|+++++. ++.|.+||.++++......
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEe
Confidence 4577889864 4555666789999999987765 3333 45789999999999965554 5689999998876543222
Q ss_pred c----cCCceeEEEECCCCCEEEEecCC---------CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccc
Q psy18231 246 E----HASKVTCVKFNEDSSVVISGSQD---------NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTK 312 (540)
Q Consensus 246 ~----h~~~v~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
. ....++.++++|+|+++++...+ ..-.+|.+..... ..
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~--~~-------------------------- 142 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH--VK-------------------------- 142 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC--EE--------------------------
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC--EE--------------------------
Confidence 1 13457899999999866654221 2234554432210 00
Q ss_pred cccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Ce
Q psy18231 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HE 390 (540)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~ 390 (540)
.+..+......++|+| +.
T Consensus 143 ------------------------------------------------------------~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 143 ------------------------------------------------------------KYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp ------------------------------------------------------------EEEEEESBEEEEEECTTSCE
T ss_pred ------------------------------------------------------------EEeeccccccceEEcCCCCE
Confidence 0011122346788887 44
Q ss_pred e-EeeeCCCeEEEEeC--CCCceE-----EeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCC
Q psy18231 391 I-LTASLDCRIRRYDI--RTGNLV-----TDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG 460 (540)
Q Consensus 391 l-~~~~~dg~i~iwd~--~~~~~~-----~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 460 (540)
+ ++.+.++.|.+||+ .++... ..+.. .....++++++|++.++...++.|..||..+++.+..+..+...
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~ 242 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDK 242 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSB
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCC
Confidence 4 55566889999987 455432 22221 45788999999998888778889999999989988888777655
Q ss_pred cceEEEEec-CCCCeEEEeeC
Q psy18231 461 DFRIECCLD-SKDSQIFCGSS 480 (540)
Q Consensus 461 v~~~~~~~s-~~~~~l~s~s~ 480 (540)
++++ +|. |+++.|+.++.
T Consensus 243 ~t~~--~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 243 TTSC--CFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEE--EEESGGGCEEEEEEB
T ss_pred ceEE--EEeCCCCCEEEEEcC
Confidence 6665 887 78877665543
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.37 E-value=1.6e-11 Score=127.07 Aligned_cols=239 Identities=10% Similarity=0.123 Sum_probs=152.0
Q ss_pred cCCcceeEEEEeeCCCeEEE-----eeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCc-------
Q psy18231 204 GHAHEVNDATAACDSSQIAS-----GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT------- 271 (540)
Q Consensus 204 ~h~~~v~~l~~sp~~~~l~s-----~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~------- 271 (540)
+|...+..++|||||++||- |+.+.+|++||+.+++.+... .+......++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 35567888999999999884 333468999999999865431 111123578899 9999988887743
Q ss_pred ------EEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccce
Q psy18231 272 ------VMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345 (540)
Q Consensus 272 ------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (540)
|++|++.+.......
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~----------------------------------------------------------- 224 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRL----------------------------------------------------------- 224 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEE-----------------------------------------------------------
T ss_pred cCCCcEEEEEECCCCcccceE-----------------------------------------------------------
Confidence 777777655311000
Q ss_pred eEEEeecccceecccccccccccchhhhhhc-ccccEEEEEecC--CeeEeee----CCCeEEEEeCCCCc-eEEeeeC-
Q psy18231 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKE-ARDSITSVHVSD--HEILTAS----LDCRIRRYDIRTGN-LVTDYVG- 416 (540)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~--~~l~~~~----~dg~i~iwd~~~~~-~~~~~~~- 416 (540)
+..... |.....++.++| ++++... .+..|+++|+.++. ....+..
T Consensus 225 -------------------------v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 225 -------------------------VFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -------------------------EESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred -------------------------EEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 001122 334456778887 5454332 23589999998763 2333332
Q ss_pred -CceEEEEEecCCcEEEeec-C---CCeEEEEeccccch--hhhhccCcCCcceEEEEecCCCCeEEEeeCCC---cEEE
Q psy18231 417 -EPIVDACFTRDCQCILTCS-T---DECLRLFDKATGEL--LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG---KIYK 486 (540)
Q Consensus 417 -~~i~~~~~sp~~~~l~~~~-~---dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg---~i~i 486 (540)
...... ++++|..|+..+ . .+.|..+|+.++.. ...+..|...+ + .|++++++|+....++ .|++
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV--L--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC--E--EEEEETTEEEEEEEETTEEEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE--E--EEEEECCEEEEEEEECCeeEEEE
Confidence 233333 666666555443 3 36799999987654 34566666554 2 6788888877665544 6889
Q ss_pred EEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-C----CeeEEEEcccc
Q psy18231 487 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-G----NNVKLWTAEED 535 (540)
Q Consensus 487 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d----~~i~iw~~~~~ 535 (540)
||+. +.....+.. .+.+.+..+.++++++.|+... + ++|..||+.++
T Consensus 355 ~d~~-g~~~~~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 355 FDYE-GKRVREVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp ECTT-SCEEEEECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EECC-CCeeEEeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 9876 444455542 3456788888899987766554 4 78999998654
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.37 E-value=5.9e-11 Score=121.64 Aligned_cols=296 Identities=12% Similarity=0.112 Sum_probs=179.4
Q ss_pred CCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcc-----------eeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEec
Q psy18231 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE-----------VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244 (540)
Q Consensus 176 g~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~-----------v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (540)
+..|++++.++.|.-+|..+|+.+.++...... ...+++ ++..|+.++.|+.|..+|..+|+.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 456777777899999999999999888643211 112333 4668888999999999999999998877
Q ss_pred ccc-C----CceeE-EEECCCCCEEEEecC------CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccc
Q psy18231 245 REH-A----SKVTC-VKFNEDSSVVISGSQ------DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTK 312 (540)
Q Consensus 245 ~~h-~----~~v~~-~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
..+ . ..+.. ... .+..++.++. +|.|..+|..+++..-..
T Consensus 155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~-------------------------- 206 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW-------------------------- 206 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE--------------------------
T ss_pred cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe--------------------------
Confidence 644 1 11111 111 2345555543 689999999998731000
Q ss_pred cccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Ce
Q psy18231 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HE 390 (540)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~ 390 (540)
............... .......|. ...... ...........+++++ +.
T Consensus 207 -----------------~~~~~~~~~~~~~~~-------~~~g~~~w~-----~~g~~~-~~~~g~~~w~~~~~d~~~~~ 256 (677)
T 1kb0_A 207 -----------------FSVPGDPSKPFEDES-------MKRAARTWD-----PSGKWW-EAGGGGTMWDSMTFDAELNT 256 (677)
T ss_dssp -----------------ESSCCCTTSCCSSHH-------HHHHHTTSC-----GGGCHH-HHCEECCCCSCEEEETTTTE
T ss_pred -----------------ccCCCCccccccccc-------ccccccccc-----ccCcee-EeCCCcccccceeEcCCCCE
Confidence 000000000000000 000000000 000000 0001111222455555 66
Q ss_pred eEeeeCCC-------------------eEEEEeCCCCceEEeeeC--C---------ceEEEEEecCC---cEEEeecCC
Q psy18231 391 ILTASLDC-------------------RIRRYDIRTGNLVTDYVG--E---------PIVDACFTRDC---QCILTCSTD 437 (540)
Q Consensus 391 l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~--~---------~i~~~~~sp~~---~~l~~~~~d 437 (540)
+++++.++ .|..+|.++++.+..+.. + ....+....+| +.++.++.+
T Consensus 257 vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~ 336 (677)
T 1kb0_A 257 MYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKN 336 (677)
T ss_dssp EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTT
T ss_pred EEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCC
Confidence 66666553 599999999998877652 1 12233444577 689999999
Q ss_pred CeEEEEeccccchhhhhccCcCC-----------c------------------------ceEEEEecCCCCeEEEeeC--
Q psy18231 438 ECLRLFDKATGELLEEYKGHKSG-----------D------------------------FRIECCLDSKDSQIFCGSS-- 480 (540)
Q Consensus 438 g~i~i~d~~~~~~~~~~~~~~~~-----------v------------------------~~~~~~~s~~~~~l~s~s~-- 480 (540)
|.++++|..+|+.+..+...... + ..+ +++|++.++++...
T Consensus 337 G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~--a~dp~~~~~yv~~~~~ 414 (677)
T 1kb0_A 337 GFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPM--SFNPQTGLVYLPAQNV 414 (677)
T ss_dssp SEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCC--EEETTTTEEEEEEEEC
T ss_pred CEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCc--eEcCCCCEEEEeChhc
Confidence 99999999999887554321100 0 022 68888888877543
Q ss_pred -----------------------------------------CCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEE
Q psy18231 481 -----------------------------------------DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 519 (540)
Q Consensus 481 -----------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l 519 (540)
.|.|..||+.+++.+-... +..++....++.++.++
T Consensus 415 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~---~~~~~~~g~~~~~g~~v 491 (677)
T 1kb0_A 415 PVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE---HVSPWNGGTLTTAGNVV 491 (677)
T ss_dssp CCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE---ESSSCCCCEEEETTTEE
T ss_pred ceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC---CCCCCcCcceEeCCCEE
Confidence 2789999999999988876 33344555566778888
Q ss_pred Eeec-CCeeEEEEccccc
Q psy18231 520 MSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 520 ~s~~-d~~i~iw~~~~~~ 536 (540)
+.++ |+.+++||.+++.
T Consensus 492 ~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 492 FQGTADGRLVAYHAATGE 509 (677)
T ss_dssp EEECTTSEEEEEETTTCC
T ss_pred EEECCCCcEEEEECCCCc
Confidence 8888 9999999998763
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.37 E-value=2.2e-10 Score=106.96 Aligned_cols=220 Identities=11% Similarity=0.092 Sum_probs=141.2
Q ss_pred eeEEEEeeCC-CeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcch
Q psy18231 209 VNDATAACDS-SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQV 287 (540)
Q Consensus 209 v~~l~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 287 (540)
..+..|+|++ .++++...++.|..||..+++.. .+. ....+.++.|+++++++++. .+ .|.+||..+++...+.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~- 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA- 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE-
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe-
Confidence 4567899974 45666667889999999877543 232 35679999999999877754 44 4889998766521000
Q ss_pred hhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccc
Q psy18231 288 RCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIH 367 (540)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (540)
.
T Consensus 126 ---------------------------------------------------------------~---------------- 126 (326)
T 2ghs_A 126 ---------------------------------------------------------------E---------------- 126 (326)
T ss_dssp ---------------------------------------------------------------C----------------
T ss_pred ---------------------------------------------------------------e----------------
Confidence 0
Q ss_pred cchhhhhhcccccEEEEEecC-CeeEeeeC-------CCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEee-cCC
Q psy18231 368 NSCFQALKEARDSITSVHVSD-HEILTASL-------DCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTC-STD 437 (540)
Q Consensus 368 ~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~-~~d 437 (540)
. ........+.++.+++ ..+..++. .+.|..++ +++....... .....++|+|+++.++.+ +.+
T Consensus 127 ---~-~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 127 ---L-ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ---S-STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred ---C-CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 0 0000123567778877 33444432 24566666 4544322222 456789999999876554 557
Q ss_pred CeEEEEecc--cc-ch-----hhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeE
Q psy18231 438 ECLRLFDKA--TG-EL-----LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNS 509 (540)
Q Consensus 438 g~i~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 509 (540)
+.|.+||+. ++ +. +..+......... ++++++|.+.++...++.|.+||. +++.+..+. .+...+++
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~g--i~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~--~~~~~~~~ 275 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDG--SVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE--VPGKQTTC 275 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEE--EEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE--CSCSBEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCe--eEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE--CCCCCcEE
Confidence 899999986 55 32 1112212222333 478899987777767789999997 677777776 55567999
Q ss_pred EEEc-CCCcEEEeec
Q psy18231 510 LCSH-PTRKHIMSAC 523 (540)
Q Consensus 510 l~~s-~d~~~l~s~~ 523 (540)
++|+ |+++.|+.++
T Consensus 276 ~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 276 PAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEESTTSCEEEEEE
T ss_pred EEEecCCCCEEEEEe
Confidence 9998 8887665444
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.37 E-value=8.3e-13 Score=125.43 Aligned_cols=206 Identities=12% Similarity=0.037 Sum_probs=119.7
Q ss_pred CCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhh
Q psy18231 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKE 296 (540)
Q Consensus 217 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 296 (540)
++..+++++.||.|..||..+|+.+..+.. +.+.+..+..++..+++++.||.|..||..+++..........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~----- 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP----- 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-----
Confidence 577899999999999999999999988765 5565555666777888888999999999988763111000000
Q ss_pred cCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhc
Q psy18231 297 ARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKE 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (540)
...
T Consensus 81 ----------------------------------------------------------------------------~~~- 83 (369)
T 2hz6_A 81 ----------------------------------------------------------------------------ELV- 83 (369)
T ss_dssp ----------------------------------------------------------------------------HHH-
T ss_pred ----------------------------------------------------------------------------ccc-
Confidence 000
Q ss_pred ccccEEEEEe-cCCeeEeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhc
Q psy18231 377 ARDSITSVHV-SDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK 455 (540)
Q Consensus 377 ~~~~v~~l~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 455 (540)
...+ .+ ....+++++.|+.++.||.++|+.+..+..+. ...++|++..+++++.|+.|+.||.++++.+..+.
T Consensus 84 ~~sp----~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 84 QASP----CRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp TTCS----CC-----CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred ccCc----eEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 0000 11 23567788889999999999999887776543 24556788899999999999999999998876665
Q ss_pred cCcCCcceEEEEecCCC---CeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcE
Q psy18231 456 GHKSGDFRIECCLDSKD---SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKH 518 (540)
Q Consensus 456 ~~~~~v~~~~~~~s~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~ 518 (540)
.+.. ... +++.+. ..+++++.||.|+.||..+++.+.... .....+....++++|..
T Consensus 158 ~~~~--~~~--~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~--~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 158 YFDY--AAS--LPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN--YASPVVAFYVWQREGLR 217 (369)
T ss_dssp EEEE--CCB--CCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE--CSSCEEEEEECTTSSCE
T ss_pred cccc--cCc--cccCCccccceEEEECCCCEEEEEECCCCcEEEEec--CCCceEEEEEecCCceE
Confidence 3321 111 233332 567888999999999999999888776 33333344566677753
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.36 E-value=1.5e-10 Score=107.07 Aligned_cols=221 Identities=10% Similarity=0.094 Sum_probs=143.9
Q ss_pred eecCeEEEEeCCCCC-EEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCcee
Q psy18231 163 VLSGLMHTRFPVDGS-YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPV 241 (540)
Q Consensus 163 h~~~v~~v~~spdg~-~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 241 (540)
.........|+|+|+ +++++..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+.. ++..
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE
Confidence 445667899999998 5567777899999997 454 34555567789999999999977776667899999985 5533
Q ss_pred Eeccc----cCCceeEEEECCCCCEEEE----ecC-------------CCcEEEEEecCCCCCCcchhhhhHhhhhcCCc
Q psy18231 242 RRWRE----HASKVTCVKFNEDSSVVIS----GSQ-------------DNTVMMWDVKSRSHHPIQVRCLNEALKEARDS 300 (540)
Q Consensus 242 ~~~~~----h~~~v~~~~~~~~~~~l~s----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 300 (540)
..... ....+..++++++|++.++ |.. .+.|..||..+++. .
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--~--------------- 182 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--Q--------------- 182 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--E---------------
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--E---------------
Confidence 22211 1234678999999987776 332 12344444333321 0
Q ss_pred eeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhccccc
Q psy18231 301 ITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDS 380 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (540)
.+. ....
T Consensus 183 ------------------------------------------------------------------------~~~-~~~~ 189 (305)
T 3dr2_A 183 ------------------------------------------------------------------------RMA-DLDH 189 (305)
T ss_dssp ------------------------------------------------------------------------EEE-EESS
T ss_pred ------------------------------------------------------------------------EEe-cCCC
Confidence 000 1123
Q ss_pred EEEEEecC--CeeEeeeCC------CeEEEEeCCCCceE--Eee---eCCceEEEEEecCCcEEEeecCCCeEEEEeccc
Q psy18231 381 ITSVHVSD--HEILTASLD------CRIRRYDIRTGNLV--TDY---VGEPIVDACFTRDCQCILTCSTDECLRLFDKAT 447 (540)
Q Consensus 381 v~~l~~~~--~~l~~~~~d------g~i~iwd~~~~~~~--~~~---~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~ 447 (540)
...++|+| +.|+++... +.|.+|++..+... ..+ .......++++++|++.++. .+ .|.+||. +
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~ 266 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-D 266 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-T
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-C
Confidence 45678887 456666554 78999998765411 111 12345678999999955544 44 4999997 5
Q ss_pred cchhhhhccCcCCcceEEEEecCCCCeEEEeeCCC
Q psy18231 448 GELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG 482 (540)
Q Consensus 448 ~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg 482 (540)
++.+..+..+. .+..+ +|+++++.|+.++.++
T Consensus 267 g~~~~~~~~~~-~~~~~--~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 267 GQLLGHIPTPG-TASNC--TFDQAQQRLFITGGPC 298 (305)
T ss_dssp SCEEEEEECSS-CCCEE--EECTTSCEEEEEETTE
T ss_pred CCEEEEEECCC-ceeEE--EEeCCCCEEEEEcCCe
Confidence 66666666554 35555 7889998888887764
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.36 E-value=6.8e-11 Score=121.46 Aligned_cols=296 Identities=13% Similarity=0.119 Sum_probs=176.2
Q ss_pred CCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcc----------e-eEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEec
Q psy18231 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE----------V-NDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244 (540)
Q Consensus 176 g~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~----------v-~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (540)
+..|++++.++.|.-+|..+|+.+.++..+... + ..++. ++..|+.++.|+.|..+|..+|+.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 556777777899999999999999988643221 1 11222 4667888999999999999999998776
Q ss_pred ccc--CCceeEEEECC---CCCEEEEec------CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccc
Q psy18231 245 REH--ASKVTCVKFNE---DSSVVISGS------QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKN 313 (540)
Q Consensus 245 ~~h--~~~v~~~~~~~---~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
... ......+..+| ++ .++.++ .+|.|..||.++++..-.. ......+..
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~------------------~~~~~~p~~ 208 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF------------------YTVPGDPKL 208 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE------------------ESSCCCTTS
T ss_pred cCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe------------------cccCCCccc
Confidence 532 11111112222 44 444443 3689999999998731100 000000000
Q ss_pred ccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Cee
Q psy18231 314 HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI 391 (540)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l 391 (540)
. .... .+. .....+ .+........+......+++++ +++
T Consensus 209 ~--------------------------~~~~-~~~-----~~~~~~-------~g~~w~~~~~g~~~w~~~~~d~~~~~v 249 (689)
T 1yiq_A 209 P--------------------------PEGK-GME-----IAAKTW-------FGDAYVEQGGGGTAWDSFAYDPELNLL 249 (689)
T ss_dssp C--------------------------CCSH-HHH-----HHHTTC-------CSSTHHHHCEECCCCSCEEEETTTTEE
T ss_pred c--------------------------cccc-ccc-----cccccc-------CCceeeecCCCCccccceeEcCCCCEE
Confidence 0 0000 000 000000 0000000001111112455655 677
Q ss_pred EeeeCCC-------------------eEEEEeCCCCceEEeeeC--C---------ceEEEEEecCCc---EEEeecCCC
Q psy18231 392 LTASLDC-------------------RIRRYDIRTGNLVTDYVG--E---------PIVDACFTRDCQ---CILTCSTDE 438 (540)
Q Consensus 392 ~~~~~dg-------------------~i~iwd~~~~~~~~~~~~--~---------~i~~~~~sp~~~---~l~~~~~dg 438 (540)
++++.++ .|..+|.++|+.+-.+.. + +........+|+ .++.++.+|
T Consensus 250 y~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G 329 (689)
T 1yiq_A 250 YIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNG 329 (689)
T ss_dssp EEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTS
T ss_pred EEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCC
Confidence 7777665 499999999999877653 1 122223334665 788999999
Q ss_pred eEEEEeccccchhhhhccCc--------------------------C------------C-cceEEEEecCCCCeEEEee
Q psy18231 439 CLRLFDKATGELLEEYKGHK--------------------------S------------G-DFRIECCLDSKDSQIFCGS 479 (540)
Q Consensus 439 ~i~i~d~~~~~~~~~~~~~~--------------------------~------------~-v~~~~~~~s~~~~~l~s~s 479 (540)
.++++|..+|+.+....... . . -..+ +++|+..++++.+
T Consensus 330 ~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~--a~dp~~~~~yv~~ 407 (689)
T 1yiq_A 330 FFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPM--SYNPDTGLVYIPA 407 (689)
T ss_dssp EEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCC--EEETTTTEEEEEE
T ss_pred eEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcc--eECCCCCEEEEec
Confidence 99999999998763211100 0 0 0113 6888888777653
Q ss_pred C---------------------------------------------CCcEEEEEecCCcceeEEEecccceeeeEEEEcC
Q psy18231 480 S---------------------------------------------DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 514 (540)
Q Consensus 480 ~---------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 514 (540)
. +|.|+.||+.+++.+-++. .+ .++..-.++.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~--~~-~~~~~g~~~t 484 (689)
T 1yiq_A 408 HIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP--YV-TIFNGGTLST 484 (689)
T ss_dssp EECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE--ES-SSCCCCEEEE
T ss_pred cccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc--CC-CCccCccceE
Confidence 2 4789999999999988887 23 2333345666
Q ss_pred CCcEEEeec-CCeeEEEEccccc
Q psy18231 515 TRKHIMSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 515 d~~~l~s~~-d~~i~iw~~~~~~ 536 (540)
.+.+++.++ |+.|+.||.+++.
T Consensus 485 agglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 485 AGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp TTTEEEEECTTSEEEEEETTTCC
T ss_pred CCCEEEEECCCCcEEEEECCCCc
Confidence 788899999 9999999998763
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.34 E-value=2.4e-10 Score=109.26 Aligned_cols=266 Identities=7% Similarity=0.019 Sum_probs=168.3
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCeeEEEeecCC---------cceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEecc
Q psy18231 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA---------HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR 245 (540)
Q Consensus 175 dg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~---------~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (540)
++..|++++.++.|..+|.++++.+..+.... ..+.+ ....++..++.++.++.|..+|..+|+.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 45678888889999999999999887775421 22222 222246678888899999999999999887665
Q ss_pred ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEE
Q psy18231 246 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVF 325 (540)
Q Consensus 246 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (540)
............ +..++.++.++.|..+|..+++..-..
T Consensus 131 ~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~--------------------------------------- 169 (376)
T 3q7m_A 131 VAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTV--------------------------------------- 169 (376)
T ss_dssp CSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEE---------------------------------------
T ss_pred CCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEE---------------------------------------
Confidence 433222222222 447788888999999999887621000
Q ss_pred eeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeC
Q psy18231 326 AFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDI 405 (540)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~ 405 (540)
.... ........ .........+++++.++.+..+|.
T Consensus 170 ---------------------------~~~~-------------~~~~~~~~----~~~~~~~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 170 ---------------------------NLDM-------------PSLSLRGE----SAPTTAFGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp ---------------------------ECCC------------------CCC----CCCEEETTEEEECCTTTEEEEEET
T ss_pred ---------------------------eCCC-------------CceeecCC----CCcEEECCEEEEEcCCCEEEEEEC
Confidence 0000 00000000 111222467888888999999999
Q ss_pred CCCceEEeeeCCce------E---EEEEec--CCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCe
Q psy18231 406 RTGNLVTDYVGEPI------V---DACFTR--DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474 (540)
Q Consensus 406 ~~~~~~~~~~~~~i------~---~~~~sp--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~ 474 (540)
.+++.+.......- . .+.-.| .+..+++++.++.+..+|..+++.+...... ....+ ..++..
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~----~~~~~~ 279 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG--SVNDF----IVDGNR 279 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC--CEEEE----EEETTE
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC--CCCCc----eEECCE
Confidence 99998776653110 0 011111 3456777778999999999999877554422 12222 234668
Q ss_pred EEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcccc
Q psy18231 475 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED 535 (540)
Q Consensus 475 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~ 535 (540)
++.++.++.|..+|..+++.+..... .....+...... +..|+.++ +|.|.++|..++
T Consensus 280 l~~~~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 280 IYLVDQNDRVMALTIDGGVTLWTQSD-LLHRLLTSPVLY--NGNLVVGDSEGYLHWINVEDG 338 (376)
T ss_dssp EEEEETTCCEEEEETTTCCEEEEECT-TTTSCCCCCEEE--TTEEEEECTTSEEEEEETTTC
T ss_pred EEEEcCCCeEEEEECCCCcEEEeecc-cCCCcccCCEEE--CCEEEEEeCCCeEEEEECCCC
Confidence 88888999999999999988766541 111222333332 45677777 999999998765
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.34 E-value=4.3e-11 Score=112.05 Aligned_cols=265 Identities=10% Similarity=-0.018 Sum_probs=167.9
Q ss_pred eeeeeccccccee--ee-eecCeEEEEeCCCCCEEEEee----------CCCcEEEEcCCCCeeEEEeecC-------Cc
Q psy18231 148 SIRVYRPLTVNRE--LF-VLSGLMHTRFPVDGSYCLTCG----------SDKKIKLWNPYRNLLLKTYGGH-------AH 207 (540)
Q Consensus 148 ~i~~~~~~~~~~~--~~-h~~~v~~v~~spdg~~lat~~----------~dg~i~iwd~~~~~~~~~~~~h-------~~ 207 (540)
++.+.+..+.+.. +. -..+ .+.|+|||++++++. .++.|.+||+.+++.+.++... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 5667776664422 11 1234 799999999999886 3689999999999999998643 13
Q ss_pred ceeEEEEeeCCCeEEEeeC--CCeEEE--EEcCCCceeEeccccCCceeEEEECCCC-CEEEEecCCCcEEEEEecC---
Q psy18231 208 EVNDATAACDSSQIASGAS--DKSVIL--WEVTTGQPVRRWREHASKVTCVKFNEDS-SVVISGSQDNTVMMWDVKS--- 279 (540)
Q Consensus 208 ~v~~l~~sp~~~~l~s~s~--dg~i~i--wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~--- 279 (540)
....++++|||++++++.. +..|.+ +|+.+ +..+.- .+. ..+.|++ ..+++.+.||.+.+.|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 4568999999999998875 467888 99877 344421 111 1123443 3455667788888888876
Q ss_pred --CCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeeccccee
Q psy18231 280 --RSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQ 357 (540)
Q Consensus 280 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (540)
++.....
T Consensus 198 ~~~~v~~~~----------------------------------------------------------------------- 206 (368)
T 1mda_H 198 AAGIVGAQC----------------------------------------------------------------------- 206 (368)
T ss_dssp CCEECCCCS-----------------------------------------------------------------------
T ss_pred cCCeEEEEe-----------------------------------------------------------------------
Confidence 2110000
Q ss_pred cccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCc--eEEeee------------CCceEEEE
Q psy18231 358 IGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGN--LVTDYV------------GEPIVDAC 423 (540)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~------------~~~i~~~~ 423 (540)
. ....-...+. . ...++.++..+. +.+.+.|..+.. .+..+. ......++
T Consensus 207 ---------t----~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 207 ---------T----GAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp ---------C----TTSCBCSCCE-E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred ---------e----eeeeCCCCcc-c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 0 0000011122 1 112244444445 889999986542 222221 01122268
Q ss_pred EecCCcEEEeecC---------CCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCe-EEEee-CCCcEEEEEecCC
Q psy18231 424 FTRDCQCILTCST---------DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCGS-SDGKIYKWQLVDS 492 (540)
Q Consensus 424 ~sp~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~-l~s~s-~dg~i~iwd~~~~ 492 (540)
++|+++.++++.. ++.+.++|+.+++.+..+..... ...+ ++++||++ +++.. .++.|.++|+.++
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~-p~gi--~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD-SDAI--IAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE-ECEE--EECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC-cceE--EECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 9999988887543 23567999999999888875543 3445 89999985 55555 5999999999999
Q ss_pred cceeEEEecccceeeeEEEEcC
Q psy18231 493 SQISTLIHSVGKAVVNSLCSHP 514 (540)
Q Consensus 493 ~~~~~~~~~~~~~~v~~l~~s~ 514 (540)
+.+.++. .+ .....+++.+
T Consensus 348 kvv~~I~--vg-~~P~~i~~~~ 366 (368)
T 1mda_H 348 QDQSSVE--LD-KGPESLSVQN 366 (368)
T ss_dssp EEEEECC--CC-SCCCEEECCC
T ss_pred cEEEEEE--CC-CCCCEEEeec
Confidence 9998887 22 3344555543
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.32 E-value=6.6e-10 Score=103.67 Aligned_cols=218 Identities=11% Similarity=0.041 Sum_probs=141.3
Q ss_pred eEEEEeCCCCC-EEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEecc
Q psy18231 167 LMHTRFPVDGS-YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR 245 (540)
Q Consensus 167 v~~v~~spdg~-~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (540)
..+.+|+|++. ++++...++.|..||..+++.. .+. ....+.+++|+|+|+++++. .+ .|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 34678999754 5556667889999999877643 333 35679999999999877765 44 49999998887543221
Q ss_pred c----cCCceeEEEECCCCCEEEEecCC----CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccccc
Q psy18231 246 E----HASKVTCVKFNEDSSVVISGSQD----NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317 (540)
Q Consensus 246 ~----h~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (540)
. ....+..+.++|+|+++++...+ +...+|.+.+++. .
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~---~------------------------------- 172 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV---T------------------------------- 172 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE---E-------------------------------
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcE---E-------------------------------
Confidence 1 12468899999999876654321 2234444432210 0
Q ss_pred CceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Cee-Eee
Q psy18231 318 GLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI-LTA 394 (540)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l-~~~ 394 (540)
.+..+......++|++ +.+ ++.
T Consensus 173 -------------------------------------------------------~~~~~~~~~~~i~~s~dg~~lyv~~ 197 (326)
T 2ghs_A 173 -------------------------------------------------------KLFADISIPNSICFSPDGTTGYFVD 197 (326)
T ss_dssp -------------------------------------------------------EEEEEESSEEEEEECTTSCEEEEEE
T ss_pred -------------------------------------------------------EeeCCCcccCCeEEcCCCCEEEEEE
Confidence 0001112345778887 344 444
Q ss_pred eCCCeEEEEeCC--CC-ce-----EEeee--CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceE
Q psy18231 395 SLDCRIRRYDIR--TG-NL-----VTDYV--GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 464 (540)
Q Consensus 395 ~~dg~i~iwd~~--~~-~~-----~~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~ 464 (540)
+.++.|.+||++ ++ +. ...+. ......++++++|++.++...++.|.+||. +++.+..+..+...+.++
T Consensus 198 ~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~ 276 (326)
T 2ghs_A 198 TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCP 276 (326)
T ss_dssp TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEE
T ss_pred CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEE
Confidence 567899999986 55 32 22222 245678999999998877767789999998 577666666655555555
Q ss_pred EEEec-CCCCeEEEeeC
Q psy18231 465 ECCLD-SKDSQIFCGSS 480 (540)
Q Consensus 465 ~~~~s-~~~~~l~s~s~ 480 (540)
+|+ ++++.|+.++.
T Consensus 277 --af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 277 --AFIGPDASRLLVTSA 291 (326)
T ss_dssp --EEESTTSCEEEEEEB
T ss_pred --EEecCCCCEEEEEec
Confidence 787 88777655543
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.31 E-value=8.2e-11 Score=114.39 Aligned_cols=267 Identities=9% Similarity=0.024 Sum_probs=168.6
Q ss_pred CCCCEEEEeeC-CCcEEEEcCCCCeeEEEeec-CCcceeEEEE-e-eCCCeEEEee------------------CCCeEE
Q psy18231 174 VDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGG-HAHEVNDATA-A-CDSSQIASGA------------------SDKSVI 231 (540)
Q Consensus 174 pdg~~lat~~~-dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~-s-p~~~~l~s~s------------------~dg~i~ 231 (540)
+||++|.+... ++.|.+.|+.+.+..+.+.- .......+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 38999887665 55799999999998885532 2345788888 5 8999998884 346899
Q ss_pred EEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEE-EEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecc
Q psy18231 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM-MWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310 (540)
Q Consensus 232 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (540)
+.|..+.+...++.--. ....++++|+|+++++.+.+..-- ..+..+.+
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~----------------------------- 228 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAA----------------------------- 228 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCC-----------------------------
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhcccc-----------------------------
Confidence 99999998888775322 456788999999999888653210 00000000
Q ss_pred cccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCe
Q psy18231 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHE 390 (540)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 390 (540)
....+.+.+.... ...... .+.
T Consensus 229 --------------------------------~~d~v~V~~~~~~---------------~~~v~~-----------Gk~ 250 (595)
T 1fwx_A 229 --------------------------------EMDHIVVFNIAEI---------------EKAIAA-----------GDY 250 (595)
T ss_dssp --------------------------------SEEEEEEEEHHHH---------------HHHHHH-----------TCS
T ss_pred --------------------------------ccceEEEeeccce---------------eEeccC-----------CCe
Confidence 0000000000000 000000 011
Q ss_pred eEeeeCCCeEEEEeCCC--Cce-EEeee-CCceEEEEEecCCcEEEeec-CCCeEEEEeccccch------------hhh
Q psy18231 391 ILTASLDCRIRRYDIRT--GNL-VTDYV-GEPIVDACFTRDCQCILTCS-TDECLRLFDKATGEL------------LEE 453 (540)
Q Consensus 391 l~~~~~dg~i~iwd~~~--~~~-~~~~~-~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~------------~~~ 453 (540)
... +.|.+.|.++ ++. +..+. +....++.++|||+++++++ .+.+|.++|+.+.+. +.+
T Consensus 251 ~~i----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 251 QEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp EEE----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred eEE----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE
Confidence 111 4599999998 544 44553 46788999999999877665 588999999987642 122
Q ss_pred hccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecC----------CcceeEEEec---ccceeeeEEEEcCCCcEEE
Q psy18231 454 YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD----------SSQISTLIHS---VGKAVVNSLCSHPTRKHIM 520 (540)
Q Consensus 454 ~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~----------~~~~~~~~~~---~~~~~v~~l~~s~d~~~l~ 520 (540)
...-.+ -...+|+++|...++.-.|++|.+||+.+ .+.+.++... +|...-..+.++|||++|+
T Consensus 327 v~vG~g---P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~ 403 (595)
T 1fwx_A 327 PELGLG---PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLV 403 (595)
T ss_dssp CBCCSC---EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEE
T ss_pred cCCCCC---cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEE
Confidence 222222 23348999994455667899999999987 4566666621 2222223345689999999
Q ss_pred eec--C-Cee-----------EEEEcccc
Q psy18231 521 SAC--G-NNV-----------KLWTAEED 535 (540)
Q Consensus 521 s~~--d-~~i-----------~iw~~~~~ 535 (540)
++. . ..+ .++|++++
T Consensus 404 ~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 404 CLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp EEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred EcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 986 3 344 88888543
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.30 E-value=5.6e-13 Score=126.60 Aligned_cols=257 Identities=9% Similarity=0.008 Sum_probs=148.5
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCc-ee-
Q psy18231 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK-VT- 252 (540)
Q Consensus 175 dg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~-v~- 252 (540)
++..|++++.||.|..||..+|+.+.++.. +.+.+..+..++..+++++.||.|..||.++|+.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577899999999999999999999998876 56666666778888888899999999999999887666533211 11
Q ss_pred EEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeeccc
Q psy18231 253 CVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYL 332 (540)
Q Consensus 253 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (540)
...+. ++..+++++.|+.|..||..+++.....
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~---------------------------------------------- 118 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTL---------------------------------------------- 118 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC------------------------------------------------------
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEe----------------------------------------------
Confidence 00111 3456788888999999999988731110
Q ss_pred ccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEE
Q psy18231 333 NGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVT 412 (540)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 412 (540)
..+. .+ ..+...+.+++++.|+.|+.||.++++.+.
T Consensus 119 ------------------------------------------~~~~-~~-~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 119 ------------------------------------------SSAF-AD-SLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp ----------------------------------------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred ------------------------------------------cCCC-cc-cccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 0000 00 000123678888999999999999998776
Q ss_pred eeeCCceEEEEEecCC---cEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeE----EEeeCCCcEE
Q psy18231 413 DYVGEPIVDACFTRDC---QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQI----FCGSSDGKIY 485 (540)
Q Consensus 413 ~~~~~~i~~~~~sp~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l----~s~s~dg~i~ 485 (540)
.+........+++++. ..+++++.||.++.||..+++.+.++... .++.. .+.++++|... +.+ ++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~-~~~~~~dg~~~v~~~~~~--~~~l~ 230 (369)
T 2hz6_A 155 NATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVA-FYVWQREGLRKVMHINVA--VETLR 230 (369)
T ss_dssp EEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEE-EEECTTSSCEEECCEEEE--HHHHH
T ss_pred eEecccccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEE-EEEecCCceEeccceeec--cccee
Confidence 6543222233344432 56777889999999999999887766533 33332 23556666432 122 34567
Q ss_pred EEEecCCc----ceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcc
Q psy18231 486 KWQLVDSS----QISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 486 iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
.+|..+|+ .+..+.... .+.+.. -.+..|+.++ ||.+..++..
T Consensus 231 ~ld~~tG~~~~~~~W~~~~~~---~~~sp~--~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 231 YLTFMSGEVGRITKWKYPFPK---ETEAKS--KLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHHHHHHHTSCCCCCC---HHHHHH--HSEEEECBEECSSCEECCEEE
T ss_pred eeehhcCCcccceeeeeccCc---cccccc--cccceEEEecccCCEEecCcc
Confidence 77776776 444443111 111000 1234566666 8888777765
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.26 E-value=1.5e-10 Score=108.39 Aligned_cols=263 Identities=14% Similarity=0.136 Sum_probs=165.8
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEecc
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR 245 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (540)
.+.++...++|. |..++.+ |..+|. +++.+..+...........+. +..|..++.++.|..+|.. ++......
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~ 133 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFK 133 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEE
T ss_pred cccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEc
Confidence 356677777775 4445544 888886 665544443333333333443 5567778888999999988 87776666
Q ss_pred ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEE
Q psy18231 246 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVF 325 (540)
Q Consensus 246 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (540)
.+...+.++...+++. ++.++.++.|..+|.. ++....
T Consensus 134 ~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~---------------------------------------- 171 (330)
T 3hxj_A 134 TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWR---------------------------------------- 171 (330)
T ss_dssp CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEE----------------------------------------
T ss_pred CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEE----------------------------------------
Confidence 5566667777777776 5667778889999876 441000
Q ss_pred eeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-CeeEeeeCCCeEEEEe
Q psy18231 326 AFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-HEILTASLDCRIRRYD 404 (540)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~dg~i~iwd 404 (540)
.......+.++...+ ..+.+++ +.|..+|
T Consensus 172 ------------------------------------------------~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d 201 (330)
T 3hxj_A 172 ------------------------------------------------FKTNDAITSAASIGKDGTIYFGS--DKVYAIN 201 (330)
T ss_dssp ------------------------------------------------EECSSCCCSCCEECTTCCEEEES--SSEEEEC
T ss_pred ------------------------------------------------EecCCCceeeeEEcCCCEEEEEe--CEEEEEC
Confidence 000011223344433 5566666 7899999
Q ss_pred CCCCceEEeeeC--CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCC
Q psy18231 405 IRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG 482 (540)
Q Consensus 405 ~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg 482 (540)
.+++....... ..+.++...++|.+ .+++.++.+..+|. +++.+..+.........+ ...+++ .|..++.+|
T Consensus 202 -~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~--~~~~~g-~l~v~t~~g 275 (330)
T 3hxj_A 202 -PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINP-DGTEKWRFKTGKRIESSP--VIGNTD-TIYFGSYDG 275 (330)
T ss_dssp -TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECT-TSCEEEEEECSSCCCSCC--EECTTS-CEEEECTTC
T ss_pred -CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECC-CCCEeEEeeCCCCccccc--eEcCCC-eEEEecCCC
Confidence 67776655543 45778888888764 45566778888874 555555554443333333 344444 677788888
Q ss_pred cEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEccccc
Q psy18231 483 KIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 536 (540)
Q Consensus 483 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~~~~ 536 (540)
.|..+|. +++.+..+. .....+.++...++|++.+.+.+|.+++...+...
T Consensus 276 gl~~~d~-~g~~~~~~~--~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 276 HLYAINP-DGTEKWNFE--TGSWIIATPVIDENGTIYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp EEEEECT-TSCEEEEEE--CSSCCCSCCEECTTCCEEEECTTSCEEEEEC----
T ss_pred CEEEECC-CCcEEEEEE--cCCccccceEEcCCCEEEEEcCCCeEEEEeccccc
Confidence 9999994 777777766 44566788888888886665559999998876544
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=8.5e-10 Score=103.76 Aligned_cols=227 Identities=13% Similarity=0.122 Sum_probs=142.9
Q ss_pred cceeEEEEeeCCCeEEEee--CCCeEEEEEcCCCceeEec-------cccCCceeEEEECCCCCEEEEecC-----CCcE
Q psy18231 207 HEVNDATAACDSSQIASGA--SDKSVILWEVTTGQPVRRW-------REHASKVTCVKFNEDSSVVISGSQ-----DNTV 272 (540)
Q Consensus 207 ~~v~~l~~sp~~~~l~s~s--~dg~i~iwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~-----dg~i 272 (540)
.....++++|+|+.+++.. .++.++||.+.+++.. .+ ..|-..+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6789999999999988864 2343666666555432 22 234568999999999876665433 5789
Q ss_pred EEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeec
Q psy18231 273 MMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352 (540)
Q Consensus 273 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (540)
.+||+.+++..... ..
T Consensus 96 ~~~d~~tg~~~~~~----------------------------------------------------------------~~ 111 (343)
T 2qe8_A 96 VAWDTLNNQLSRVI----------------------------------------------------------------YL 111 (343)
T ss_dssp EEEETTTTEEEEEE----------------------------------------------------------------EC
T ss_pred EEEECCCCeEEEEE----------------------------------------------------------------EC
Confidence 99998776510000 00
Q ss_pred ccceecccccccccccchhhhhhcccccEEEEEecC--Cee-Eeee---CCCeEEEEeCCCCceEEeeeCCc-e--EEEE
Q psy18231 353 LGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI-LTAS---LDCRIRRYDIRTGNLVTDYVGEP-I--VDAC 423 (540)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l-~~~~---~dg~i~iwd~~~~~~~~~~~~~~-i--~~~~ 423 (540)
. .....+...+..+++++ ..+ ++.. .++.|.+||+.+++....+.++. . ....
T Consensus 112 --------------~----~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 112 --------------P----PPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp --------------C----TTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred --------------C----hhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 0 00011223446777774 344 4444 57899999999888766664421 1 0145
Q ss_pred EecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCC-cEEEEEec---CCc-----c
Q psy18231 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG-KIYKWQLV---DSS-----Q 494 (540)
Q Consensus 424 ~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg-~i~iwd~~---~~~-----~ 494 (540)
+.++|..+.+.+.++.++.|.. ....+ +++|+|+.|+.+..++ .|+.++.. .+. .
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~--------------~~~gi--a~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~ 237 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHL--------------GVNGI--VLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAEL 237 (343)
T ss_dssp CEETTEECBEECTTSCEECCCC--------------CEEEE--EECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHH
T ss_pred eeECCEEEEeccCCCceeceec--------------cccee--EeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhh
Confidence 6667887777778888766531 12345 8999999988887766 44444432 111 0
Q ss_pred eeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEc
Q psy18231 495 ISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTA 532 (540)
Q Consensus 495 ~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~ 532 (540)
...+...++......++++++|.++++.. ++.|.+|+.
T Consensus 238 ~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 238 GSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp HTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred hcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 11111003444577899999999888888 999999998
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.14 E-value=3.6e-10 Score=105.78 Aligned_cols=255 Identities=13% Similarity=0.107 Sum_probs=161.2
Q ss_pred EEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCC
Q psy18231 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHAS 249 (540)
Q Consensus 170 v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~ 249 (540)
.....+|. |..++.++.|..|| .+++.+..+..+...+.++...+++. |..++.+ |..+|. +++.+..+.....
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~ 98 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKA 98 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC---
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCC
Confidence 34445664 66677788999999 88888776655555566677766664 5555554 888886 6665544443333
Q ss_pred ceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeee
Q psy18231 250 KVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRC 329 (540)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (540)
......+. +..++.++.++.|..+|.. ++. ..
T Consensus 99 ~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~--~~------------------------------------------- 130 (330)
T 3hxj_A 99 IVSDFTIF--EDILYVTSMDGHLYAINTD-GTE--KW------------------------------------------- 130 (330)
T ss_dssp --CCEEEE--TTEEEEECTTSEEEEECTT-SCE--EE-------------------------------------------
T ss_pred cccCceEE--CCEEEEEecCCEEEEEcCC-CCE--EE-------------------------------------------
Confidence 23333333 4567778888889988876 431 00
Q ss_pred cccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-CeeEeeeCCCeEEEEeCCCC
Q psy18231 330 KYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-HEILTASLDCRIRRYDIRTG 408 (540)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~dg~i~iwd~~~~ 408 (540)
........+.++...+ ..+.+++.++.|..+|.. +
T Consensus 131 -------------------------------------------~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g 166 (330)
T 3hxj_A 131 -------------------------------------------RFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-G 166 (330)
T ss_dssp -------------------------------------------EEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-S
T ss_pred -------------------------------------------EEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-C
Confidence 0000011122334443 668888888999999998 7
Q ss_pred ceEEeee--CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEE
Q psy18231 409 NLVTDYV--GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK 486 (540)
Q Consensus 409 ~~~~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~i 486 (540)
+....+. ...+.++...+++.+.+.. +.|..+| .+++.+..+......+..+ ...++| .|..++.++.|..
T Consensus 167 ~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~--~~~~~g-~l~v~t~~~gl~~ 239 (330)
T 3hxj_A 167 TEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRP--AISEDG-TIYVTSLDGHLYA 239 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCC--EECTTS-CEEEEETTTEEEE
T ss_pred CEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceece--EECCCC-eEEEEcCCCeEEE
Confidence 7665554 3456777777788765544 7899999 7777665555554556666 566666 4666777888888
Q ss_pred EEecCCcceeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEc
Q psy18231 487 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTA 532 (540)
Q Consensus 487 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~ 532 (540)
+| .+++.+..+. .....+..+.+.+++.+.+...++.|..+|.
T Consensus 240 ~~-~~g~~~~~~~--~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 240 IN-PDGTEKWRFK--TGKRIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp EC-TTSCEEEEEE--CSSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred EC-CCCCEeEEee--CCCCccccceEcCCCeEEEecCCCCEEEECC
Confidence 87 5677766665 3444455666776776554444888888885
No 238
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=8.7e-09 Score=105.51 Aligned_cols=108 Identities=11% Similarity=0.089 Sum_probs=78.6
Q ss_pred eeEeeeCCCeEEEEeCCCCceEEeeeCC--------------ce------------------------EEEEEecCCcEE
Q psy18231 390 EILTASLDCRIRRYDIRTGNLVTDYVGE--------------PI------------------------VDACFTRDCQCI 431 (540)
Q Consensus 390 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------~i------------------------~~~~~sp~~~~l 431 (540)
.++.++.+|.++++|.++|+.+...... ++ ..++++|+..++
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~ 395 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV 395 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence 6888999999999999999987433211 00 126788876665
Q ss_pred Eee------------------------------------cCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeE
Q psy18231 432 LTC------------------------------------STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQI 475 (540)
Q Consensus 432 ~~~------------------------------------~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l 475 (540)
++. ..+|.|..||+.+++.+.+...+.. .... .+...+.++
T Consensus 396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~--~~~t~gg~v 472 (668)
T 1kv9_A 396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH-WNGG--TLSTAGNLV 472 (668)
T ss_dssp EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-CCCC--EEEETTTEE
T ss_pred EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-CcCc--eeEeCCCEE
Confidence 531 1348899999999998776654433 2222 244567789
Q ss_pred EEeeCCCcEEEEEecCCcceeEEEe
Q psy18231 476 FCGSSDGKIYKWQLVDSSQISTLIH 500 (540)
Q Consensus 476 ~s~s~dg~i~iwd~~~~~~~~~~~~ 500 (540)
+.++.||.|+.||..+++.+..+..
T Consensus 473 f~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 473 FQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEECCcccchhhhhhcChhheEecC
Confidence 9999999999999999999998874
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.13 E-value=5.5e-09 Score=106.98 Aligned_cols=296 Identities=12% Similarity=0.105 Sum_probs=171.4
Q ss_pred CCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcc----------e-eEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEec
Q psy18231 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE----------V-NDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244 (540)
Q Consensus 176 g~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~----------v-~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (540)
+..|++++.++.|.-+|..+|+.+.++...... + ..+++ ++..++.++.|+.|..+|..+|+.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 456777777899999999999999888543211 0 12233 3567888889999999999999998776
Q ss_pred cccCC-ceeEEEECC--CCCEEEEecC------CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccc
Q psy18231 245 REHAS-KVTCVKFNE--DSSVVISGSQ------DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHL 315 (540)
Q Consensus 245 ~~h~~-~v~~~~~~~--~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (540)
..... ....+..+| .+..++.+.. +|.|..+|.++++..-.. ......+....
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~------------------~~~~~~p~~~~ 205 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF------------------YTVPGDPALPY 205 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE------------------ESSCCCTTSCC
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe------------------cccCCCCCccc
Confidence 54210 001111111 1334555543 588999999988731100 00000000000
Q ss_pred ccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEe
Q psy18231 316 SNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILT 393 (540)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~ 393 (540)
.. ..+ ......+ .+........+......+++++ +.++.
T Consensus 206 --------------------------~~-~~~-----~~~~~~~-------~g~~~w~~~~gg~~w~~~a~d~~~~~vy~ 246 (668)
T 1kv9_A 206 --------------------------EH-PEL-----REAAKTW-------QGDQYWKLGGGGTVWDSMAYDPELDLLYV 246 (668)
T ss_dssp --------------------------SS-HHH-----HHHHTTC-------CSSCHHHHCEECCCCSCEEEETTTTEEEE
T ss_pred --------------------------cc-ccc-----ccccccC-------CccceeeeCCCCccccceEEcCCCCEEEE
Confidence 00 000 0000000 0000000111112222355655 66777
Q ss_pred eeCCC-------------------eEEEEeCCCCceEEeeeC-----------CceEEEEEecCCc---EEEeecCCCeE
Q psy18231 394 ASLDC-------------------RIRRYDIRTGNLVTDYVG-----------EPIVDACFTRDCQ---CILTCSTDECL 440 (540)
Q Consensus 394 ~~~dg-------------------~i~iwd~~~~~~~~~~~~-----------~~i~~~~~sp~~~---~l~~~~~dg~i 440 (540)
++.++ .|.-+|.++++.+-.+.. .+.....+..+|+ .++.++.+|.+
T Consensus 247 ~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l 326 (668)
T 1kv9_A 247 GTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFF 326 (668)
T ss_dssp ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEE
T ss_pred eCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEE
Confidence 76665 499999999999877753 1223333445775 68899999999
Q ss_pred EEEeccccchhhhhccCcC------------C------------------------cceEEEEecCCCCeEEEe------
Q psy18231 441 RLFDKATGELLEEYKGHKS------------G------------------------DFRIECCLDSKDSQIFCG------ 478 (540)
Q Consensus 441 ~i~d~~~~~~~~~~~~~~~------------~------------------------v~~~~~~~s~~~~~l~s~------ 478 (540)
+++|..+|+.+...+.... + -..+ +++|+...++..
T Consensus 327 ~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~--a~dp~~g~~yv~~~~~~~ 404 (668)
T 1kv9_A 327 YVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSM--SFNPGTGLVYIPYQEVPG 404 (668)
T ss_dssp EEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCC--EEETTTTEEEEEEEECCE
T ss_pred EEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcc--eECCCCCEEEEeccccce
Confidence 9999999987632221110 0 0012 567766655531
Q ss_pred ------------------------------eCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCee
Q psy18231 479 ------------------------------SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNV 527 (540)
Q Consensus 479 ------------------------------s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i 527 (540)
..+|.|..||+.+++.+-+... + .+.....+...+.+++.++ |+.|
T Consensus 405 ~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~--~-~~~~~~~~~t~gg~vf~g~~dg~l 481 (668)
T 1kv9_A 405 VYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY--P-THWNGGTLSTAGNLVFQGTAAGQM 481 (668)
T ss_dssp EECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE--S-SSCCCCEEEETTTEEEEECTTSEE
T ss_pred EeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC--C-CCCcCceeEeCCCEEEEECCcccc
Confidence 1348899999999999887762 2 2233334445678888889 9999
Q ss_pred EEEEcccc
Q psy18231 528 KLWTAEED 535 (540)
Q Consensus 528 ~iw~~~~~ 535 (540)
+.||.+++
T Consensus 482 ~a~d~~tG 489 (668)
T 1kv9_A 482 HAYSADKG 489 (668)
T ss_dssp EEEETTTC
T ss_pred hhhhhhcC
Confidence 99998865
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.13 E-value=1.9e-08 Score=94.47 Aligned_cols=110 Identities=13% Similarity=0.250 Sum_probs=80.6
Q ss_pred EeC--CCCCEEEE-eeCCCcEEEEcCCCC----eeEEEee-------cCCcceeEEEEeeCCCeEEEeeCC------CeE
Q psy18231 171 RFP--VDGSYCLT-CGSDKKIKLWNPYRN----LLLKTYG-------GHAHEVNDATAACDSSQIASGASD------KSV 230 (540)
Q Consensus 171 ~~s--pdg~~lat-~~~dg~i~iwd~~~~----~~~~~~~-------~h~~~v~~l~~sp~~~~l~s~s~d------g~i 230 (540)
.++ +++++|++ +..++.|.++|+.+. +..+++. .-...-..+..+|+| .++++..+ |.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 446 78888765 556889999998765 6666662 111234567788999 77776665 789
Q ss_pred EEEEcCCCceeEeccccC---CceeEEEECCCCCEEEEec-------------------CCCcEEEEEecCCC
Q psy18231 231 ILWEVTTGQPVRRWREHA---SKVTCVKFNEDSSVVISGS-------------------QDNTVMMWDVKSRS 281 (540)
Q Consensus 231 ~iwd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~~-------------------~dg~i~iwd~~~~~ 281 (540)
.+.|.++++.+..+.... .--..+.|+|+++.+++.. .+.+|.+||+.+++
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 999999999998886322 2245688899999888874 36789999998753
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.10 E-value=4.9e-08 Score=91.71 Aligned_cols=126 Identities=10% Similarity=0.029 Sum_probs=83.1
Q ss_pred CCCeEEEEeCCCCceEEeeeCC----ceEEEEE--ecCCcEEEeec------CCCeEEEEeccccc-------------h
Q psy18231 396 LDCRIRRYDIRTGNLVTDYVGE----PIVDACF--TRDCQCILTCS------TDECLRLFDKATGE-------------L 450 (540)
Q Consensus 396 ~dg~i~iwd~~~~~~~~~~~~~----~i~~~~~--sp~~~~l~~~~------~dg~i~i~d~~~~~-------------~ 450 (540)
.+.+|.+||+.+++.+.++.-. ....+.| +|+++++++++ .+++|.+|....++ .
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v 305 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL 305 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc
Confidence 4789999999999888877642 3445555 99999888877 45678766543321 1
Q ss_pred hhhh-------ccCcCCcceEEEEecCCCCeEEEeeC-CCcEEEEEecCC---cceeEEEeccc------------ceee
Q psy18231 451 LEEY-------KGHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQLVDS---SQISTLIHSVG------------KAVV 507 (540)
Q Consensus 451 ~~~~-------~~~~~~v~~~~~~~s~~~~~l~s~s~-dg~i~iwd~~~~---~~~~~~~~~~~------------~~~v 507 (540)
...+ .+-......+ .+|+||++|+++.. .+.|.+||+.+. +.+..+...+. .+..
T Consensus 306 ~~~lp~~~~~f~~~~~~pa~I--~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggP 383 (462)
T 2ece_A 306 EGNLPEILKPFKAVPPLVTDI--DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAP 383 (462)
T ss_dssp CSSCCGGGGGGTEECCCCCCE--EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCC
T ss_pred cccccccccccccCCCceeEE--EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCC
Confidence 1111 0001223445 79999999887764 678999998633 45555553211 0136
Q ss_pred eEEEEcCCCcEEEeec
Q psy18231 508 NSLCSHPTRKHIMSAC 523 (540)
Q Consensus 508 ~~l~~s~d~~~l~s~~ 523 (540)
..++++|||++|+++.
T Consensus 384 r~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 384 QMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCEEECTTSSEEEEEC
T ss_pred CEEEEcCCCCEEEEEc
Confidence 8899999999888775
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.03 E-value=8.8e-07 Score=93.31 Aligned_cols=279 Identities=8% Similarity=0.066 Sum_probs=177.2
Q ss_pred ecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeec-------CCcceeEEEEeeCCCeEEEeeCCCeEEEEEcC
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGG-------HAHEVNDATAACDSSQIASGASDKSVILWEVT 236 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 236 (540)
...|.++...++|.+.+ |+.++-+.+||..+++....... ....|.++...++|.+.+ |+.+ -|.+||..
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCC
Confidence 45688888888887554 44444588899877654433221 135699998888887554 4444 58899987
Q ss_pred CCceeEecc-------ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeec
Q psy18231 237 TGQPVRRWR-------EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVK 309 (540)
Q Consensus 237 ~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (540)
+++...... -....|.++...++|. |..|+.++-|..|+..+.......
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~----------------------- 346 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIR----------------------- 346 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEEC-----------------------
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEc-----------------------
Confidence 765443221 1245799999998886 566777677888886554310000
Q ss_pred ccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-
Q psy18231 310 STKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD- 388 (540)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~- 388 (540)
... ..-.-....|.++..++
T Consensus 347 --------------------------------------------------------~~~---~~~~l~~~~V~~i~~d~~ 367 (795)
T 4a2l_A 347 --------------------------------------------------------NIP---YKNSLSDNVVSCIVEDKD 367 (795)
T ss_dssp --------------------------------------------------------CCT---TSSSCSCSSEEEEEECTT
T ss_pred --------------------------------------------------------CCC---CCCCCCCCeeEEEEECCC
Confidence 000 00001234688888877
Q ss_pred CeeEeeeCCCeEEEEeCCCCceEEe----------eeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhc---
Q psy18231 389 HEILTASLDCRIRRYDIRTGNLVTD----------YVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK--- 455 (540)
Q Consensus 389 ~~l~~~~~dg~i~iwd~~~~~~~~~----------~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--- 455 (540)
..+.+|+.++-|..||..+++...- +....|.++...++|+.|.+|+.++-|.+||..+++......
T Consensus 368 g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~ 447 (795)
T 4a2l_A 368 KNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNS 447 (795)
T ss_dssp SCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTS
T ss_pred CCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCC
Confidence 7788899888899999887654332 223568999999898856667777779999988765322111
Q ss_pred -cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe-----cccceeeeEEEEcCCCcEEEeecCCeeEE
Q psy18231 456 -GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH-----SVGKAVVNSLCSHPTRKHIMSACGNNVKL 529 (540)
Q Consensus 456 -~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~l~~s~d~~~l~s~~d~~i~i 529 (540)
.....|.++ ...++|.+.+. +.+ -+.+||..+++.. .+.. ......|.++...++|.+.+... +.|..
T Consensus 448 ~l~~~~v~~i--~~d~~g~lwig-t~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~ 521 (795)
T 4a2l_A 448 QLVNENVYAI--LPDGEGNLWLG-TLS-ALVRFNPEQRSFT-TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSV 521 (795)
T ss_dssp CCSCSCEEEE--EECSSSCEEEE-ESS-CEEEEETTTTEEE-ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEE
T ss_pred CcCCCeeEEE--EECCCCCEEEE-ecC-ceeEEeCCCCeEE-EccccccccccCCceEEEEEECCCCCEEEEeC-CceEE
Confidence 123345555 66777765444 344 5888997665432 2211 11235789999999998777665 55777
Q ss_pred EEccc
Q psy18231 530 WTAEE 534 (540)
Q Consensus 530 w~~~~ 534 (540)
|+..+
T Consensus 522 ~~~~~ 526 (795)
T 4a2l_A 522 FKQEG 526 (795)
T ss_dssp EEEET
T ss_pred EeCCC
Confidence 77643
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.02 E-value=2.5e-08 Score=88.00 Aligned_cols=149 Identities=11% Similarity=-0.025 Sum_probs=106.0
Q ss_pred EEEecCCee-EeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCc--C
Q psy18231 383 SVHVSDHEI-LTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK--S 459 (540)
Q Consensus 383 ~l~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~ 459 (540)
.+++.++.+ ++.-.++.+.++|..+.+.+.++.-..-....+++||+.++++..++.|.++|..+.+.+..+.... .
T Consensus 70 Gi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~ 149 (266)
T 2iwa_A 70 GLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH 149 (266)
T ss_dssp EEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE
T ss_pred EEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc
Confidence 455556444 4445688999999999999888863311234467788888887788999999999988777765322 1
Q ss_pred C---cceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEeccc-----------ceeeeEEEEcCCCcEEEeec--
Q psy18231 460 G---DFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-----------KAVVNSLCSHPTRKHIMSAC-- 523 (540)
Q Consensus 460 ~---v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~v~~l~~s~d~~~l~s~~-- 523 (540)
+ ...+ .|. +|+..+....++.|.+.|..+++.+..+...+. ....+.++|+|+++.|+.++
T Consensus 150 p~~~~nel--e~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 150 RVIRLNEL--EYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp ECCCEEEE--EEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred ccccceeE--EEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 2 2344 455 675555555688999999999999999974211 13568999999986655544
Q ss_pred CCeeEEEEccc
Q psy18231 524 GNNVKLWTAEE 534 (540)
Q Consensus 524 d~~i~iw~~~~ 534 (540)
.++|..-++.+
T Consensus 227 ~~~v~~i~l~~ 237 (266)
T 2iwa_A 227 WPKLFEIKLHL 237 (266)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEec
Confidence 78888877754
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.01 E-value=4.5e-08 Score=98.12 Aligned_cols=130 Identities=12% Similarity=0.118 Sum_probs=87.4
Q ss_pred eeEeeeCCCeEEEEeCCCCceEEeeeCC---------------ce--------------------------EEEEEecCC
Q psy18231 390 EILTASLDCRIRRYDIRTGNLVTDYVGE---------------PI--------------------------VDACFTRDC 428 (540)
Q Consensus 390 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------------~i--------------------------~~~~~sp~~ 428 (540)
.++.++.+|.+.++|.++++.+....-. ++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 4667888999999999999887655321 11 246788877
Q ss_pred cEEEeec-------------------------------------CCCeEEEEeccccchhhhhccCcCCcceEEEEecCC
Q psy18231 429 QCILTCS-------------------------------------TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSK 471 (540)
Q Consensus 429 ~~l~~~~-------------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~ 471 (540)
.++++.. .+|.|..||..+++.+.++..... +... .+...
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~-~~~~--~~~t~ 474 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA-AWGG--TLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC-CCSB--CEEET
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC-ccce--eEEEC
Confidence 7776643 357899999999988776653322 2222 22234
Q ss_pred CCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec
Q psy18231 472 DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 472 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~ 523 (540)
+..++.++.||.|+.||..+++.+.++... ....-.-+.+..+|+.++...
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~-~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMP-SGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECS-SCCCSCCEEEEETTEEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCC-CCcEeeeEEEEECCEEEEEEE
Confidence 567888999999999999999999988742 111112234557777555443
No 245
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.00 E-value=6.5e-08 Score=96.82 Aligned_cols=80 Identities=10% Similarity=0.075 Sum_probs=52.2
Q ss_pred CCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCC
Q psy18231 436 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 515 (540)
Q Consensus 436 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d 515 (540)
.+|.|..||+.+++.+-+..... +...- .....+..++.++.||.++.||.++|+.+-+++.. ......-+.+..+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g--~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~-~g~~~~P~~y~~~ 526 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERF-AVWGG--TMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP-SGAIGYPMTYTHK 526 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS-CCCSB--CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS-SCCCSCCEEEEET
T ss_pred CcCeEEEEECCCCCEEeEecCCC-CccCc--ceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC-CCcEeccEEEEeC
Confidence 34789999999998776654221 11111 12234667888999999999999999999988742 1112223555667
Q ss_pred CcEE
Q psy18231 516 RKHI 519 (540)
Q Consensus 516 ~~~l 519 (540)
|+..
T Consensus 527 G~qy 530 (599)
T 1w6s_A 527 GTQY 530 (599)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 7643
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.97 E-value=5.5e-07 Score=81.14 Aligned_cols=246 Identities=10% Similarity=0.055 Sum_probs=146.4
Q ss_pred CCEEEEeeCCCcEEEEcCCCCee-----EEEeecCCcceeEEEEeeCCCeEE-EeeCCCeEEEEEcCCCceeEeccccCC
Q psy18231 176 GSYCLTCGSDKKIKLWNPYRNLL-----LKTYGGHAHEVNDATAACDSSQIA-SGASDKSVILWEVTTGQPVRRWREHAS 249 (540)
Q Consensus 176 g~~lat~~~dg~i~iwd~~~~~~-----~~~~~~h~~~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~h~~ 249 (540)
|++|+.+.. +.|+.+++..... ...+......+..++|++++..|. +-..++.|..++...+.....+.....
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 345555543 4788888765432 112222234678999999665555 555578999999876654333333335
Q ss_pred ceeEEEECCCCCEEE-EecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeee
Q psy18231 250 KVTCVKFNEDSSVVI-SGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFR 328 (540)
Q Consensus 250 ~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (540)
....+++++++..|+ +-...+.|.++++........
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~------------------------------------------- 116 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL------------------------------------------- 116 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-------------------------------------------
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE-------------------------------------------
Confidence 678999999655444 445567888888754321000
Q ss_pred ecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeC---CCeEEEE
Q psy18231 329 CKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASL---DCRIRRY 403 (540)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~---dg~i~iw 403 (540)
..........+++++ ..+..+.. .+.|..+
T Consensus 117 ---------------------------------------------~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 117 ---------------------------------------------FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp ---------------------------------------------ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred ---------------------------------------------EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 000012345677776 45544443 3678888
Q ss_pred eCCCCceEEeee---CCceEEEEEecCCcEE-EeecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEe-
Q psy18231 404 DIRTGNLVTDYV---GEPIVDACFTRDCQCI-LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCG- 478 (540)
Q Consensus 404 d~~~~~~~~~~~---~~~i~~~~~sp~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~- 478 (540)
+++... ...+. ......++++|+++.| ++-...+.|.++|.........+..... ...+ +.. +..|+.+
T Consensus 152 ~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~-P~gi--~~d--~~~lyva~ 225 (267)
T 1npe_A 152 HMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY-PFAV--TSY--GKNLYYTD 225 (267)
T ss_dssp ETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCS-EEEE--EEE--TTEEEEEE
T ss_pred ecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCC-ceEE--EEe--CCEEEEEE
Confidence 876432 22222 2457889999986655 4555578999999876543322222111 2233 443 4455544
Q ss_pred eCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCc
Q psy18231 479 SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 517 (540)
Q Consensus 479 s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 517 (540)
...+.|.++|..+++.+..+.. +.......+++.|++.
T Consensus 226 ~~~~~v~~~d~~~g~~~~~i~~-g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 226 WKTNSVIAMDLAISKEMDTFHP-HKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEECC-SSCCCCCCEEEECSCC
T ss_pred CCCCeEEEEeCCCCCceEEEcc-ccccccceeeecCccC
Confidence 4568999999989998888862 2222467888888764
No 247
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.95 E-value=2.1e-07 Score=95.49 Aligned_cols=113 Identities=10% Similarity=0.123 Sum_probs=75.5
Q ss_pred EEEeCC-CCCEEEEeeCCC-----------cEEEEcCCCCee--EEEeec-CCcceeEEEEeeCCCeEEEeeC-CCeEEE
Q psy18231 169 HTRFPV-DGSYCLTCGSDK-----------KIKLWNPYRNLL--LKTYGG-HAHEVNDATAACDSSQIASGAS-DKSVIL 232 (540)
Q Consensus 169 ~v~~sp-dg~~lat~~~dg-----------~i~iwd~~~~~~--~~~~~~-h~~~v~~l~~sp~~~~l~s~s~-dg~i~i 232 (540)
++++.| +++.++.|+.+. .+.+||+.+++- +..+.. +.....++++.+++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 888888887543 588999887753 233322 3333445778889999999984 468999
Q ss_pred EEcCCCceeEeccccCC-ceeEEEECCCCCEEEEec-CC-----CcEEEEEecCCC
Q psy18231 233 WEVTTGQPVRRWREHAS-KVTCVKFNEDSSVVISGS-QD-----NTVMMWDVKSRS 281 (540)
Q Consensus 233 wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~-~d-----g~i~iwd~~~~~ 281 (540)
||..+++....-..+.. .-.+++..++++.++.|+ .+ ..+.+||..+.+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 99988754433221211 123456667899999988 34 468888887654
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.95 E-value=1.7e-07 Score=82.68 Aligned_cols=195 Identities=6% Similarity=-0.029 Sum_probs=127.6
Q ss_pred eEEEEeCCCCCEEEEeeC--CCcEEEEcCCCCeeEEEeecCCc-ceeEEEEeeCCCeE-EEeeCCCeEEEEEcCCCceeE
Q psy18231 167 LMHTRFPVDGSYCLTCGS--DKKIKLWNPYRNLLLKTYGGHAH-EVNDATAACDSSQI-ASGASDKSVILWEVTTGQPVR 242 (540)
Q Consensus 167 v~~v~~spdg~~lat~~~--dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~ 242 (540)
...+.|+||+.+.++.+. ++.|+++|+.+++.+.++.-... ....+++. +..| ++.-.++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578999999754444443 68999999999999988753221 22244444 5454 455567899999999999888
Q ss_pred eccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceee
Q psy18231 243 RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTK 322 (540)
Q Consensus 243 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (540)
++...... ...+++|++.++.+..++.|.++|..+.+.....
T Consensus 101 ~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I------------------------------------ 142 (266)
T 2iwa_A 101 NFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKH------------------------------------ 142 (266)
T ss_dssp EEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEE------------------------------------
T ss_pred EEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEE------------------------------------
Confidence 87532122 2334557777777767889999998876521000
Q ss_pred EEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCCeeEee-eCCCeEE
Q psy18231 323 LVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTA-SLDCRIR 401 (540)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~-~~dg~i~ 401 (540)
.+. .-...-..+..+.+....+.+. ..++.|.
T Consensus 143 -------------------------~Vg----------------------~~~~p~~~~nele~~dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 143 -------------------------NVK----------------------YNGHRVIRLNELEYINGEVWANIWQTDCIA 175 (266)
T ss_dssp -------------------------ECE----------------------ETTEECCCEEEEEEETTEEEEEETTSSEEE
T ss_pred -------------------------EEC----------------------CCCcccccceeEEEECCEEEEecCCCCeEE
Confidence 000 0000011234455555444444 4578999
Q ss_pred EEeCCCCceEEeeeC---------------CceEEEEEecCCc-EEEeecCCCeEEEEecccc
Q psy18231 402 RYDIRTGNLVTDYVG---------------EPIVDACFTRDCQ-CILTCSTDECLRLFDKATG 448 (540)
Q Consensus 402 iwd~~~~~~~~~~~~---------------~~i~~~~~sp~~~-~l~~~~~dg~i~i~d~~~~ 448 (540)
+.|..+++.+..+.- ...+.++|+|+++ +++++...+.+...++...
T Consensus 176 vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 176 RISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999999999888753 2458999999876 5556667889999888654
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.92 E-value=2.2e-07 Score=93.01 Aligned_cols=104 Identities=16% Similarity=0.070 Sum_probs=69.6
Q ss_pred CCEEEEeeC-CCcEEEEcC-CCCeeEEEeecCCcc-----------eeEEEEeeCCCe----EEEeeCCCeEEEEEcCCC
Q psy18231 176 GSYCLTCGS-DKKIKLWNP-YRNLLLKTYGGHAHE-----------VNDATAACDSSQ----IASGASDKSVILWEVTTG 238 (540)
Q Consensus 176 g~~lat~~~-dg~i~iwd~-~~~~~~~~~~~h~~~-----------v~~l~~sp~~~~----l~s~s~dg~i~iwd~~~~ 238 (540)
+..|++++. ++.|.-+|. .+|+.+.++...... ...++++|.+.. |+.++.|+.+..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 446666776 889999999 899999887543211 123566554445 888889999999999999
Q ss_pred ceeEeccccC----CceeE-EEECCCCCEEEEec------CCCcEEEEEecCCC
Q psy18231 239 QPVRRWREHA----SKVTC-VKFNEDSSVVISGS------QDNTVMMWDVKSRS 281 (540)
Q Consensus 239 ~~~~~~~~h~----~~v~~-~~~~~~~~~l~s~~------~dg~i~iwd~~~~~ 281 (540)
+.+....... ..+.+ -... ++ .++.++ .+|.|..+|.++++
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCC
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCc
Confidence 9887654221 01111 1111 34 455554 37899999999887
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.92 E-value=1.3e-07 Score=94.74 Aligned_cols=102 Identities=12% Similarity=0.103 Sum_probs=67.4
Q ss_pred CCEEEEeeC-CCcEEEEcC-CCCeeEEEeecCCc-ce----------eEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeE
Q psy18231 176 GSYCLTCGS-DKKIKLWNP-YRNLLLKTYGGHAH-EV----------NDATAACDSSQIASGASDKSVILWEVTTGQPVR 242 (540)
Q Consensus 176 g~~lat~~~-dg~i~iwd~-~~~~~~~~~~~h~~-~v----------~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (540)
+..+++++. ++.|.-+|. .+|+.+.++..... .+ ..++. ++..++.++.|+.+..+|..+|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 445666666 899999999 89999888753221 00 11233 35678888889999999999999887
Q ss_pred eccccC--C--ceeE-EEECCCCCEEEEecC------CCcEEEEEecCCC
Q psy18231 243 RWREHA--S--KVTC-VKFNEDSSVVISGSQ------DNTVMMWDVKSRS 281 (540)
Q Consensus 243 ~~~~h~--~--~v~~-~~~~~~~~~l~s~~~------dg~i~iwd~~~~~ 281 (540)
...... . .+.+ .... ++ .++.++. +|.|..+|..+++
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred EecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCc
Confidence 654211 0 1111 1111 34 5555554 7899999999887
No 251
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.88 E-value=1.5e-07 Score=94.49 Aligned_cols=80 Identities=16% Similarity=0.279 Sum_probs=54.4
Q ss_pred CCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEeccccee-eeEEEEcCC
Q psy18231 437 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV-VNSLCSHPT 515 (540)
Q Consensus 437 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~l~~s~d 515 (540)
+|.|..||+.+++.+-+...... .... .....+.+++.|+.||.++.||.++|+.+.+++. ..+. -.-+.|..+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~-~~~g--~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~--~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLP-LWAG--VLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT--GSGIVSPPITWEQD 539 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-CCSC--CEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEET
T ss_pred cceEEEEECCCCCEEEEecCCCC-Cccc--ceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC--CCCcccCceEEEEC
Confidence 68899999999988766654322 2221 1222466888899999999999999999999884 2221 123566678
Q ss_pred CcEEEe
Q psy18231 516 RKHIMS 521 (540)
Q Consensus 516 ~~~l~s 521 (540)
|+..++
T Consensus 540 G~qYv~ 545 (582)
T 1flg_A 540 GEQYLG 545 (582)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 864443
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.87 E-value=1.7e-07 Score=81.60 Aligned_cols=136 Identities=10% Similarity=-0.029 Sum_probs=97.2
Q ss_pred EEecCCee-EeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCc--CC
Q psy18231 384 VHVSDHEI-LTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SG 460 (540)
Q Consensus 384 l~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~ 460 (540)
+++..+.+ ++.-.++.+.+||.++.+.+.++.-.. ....+++|++.|+.+..++.|.++|..+.+.+.++.... .+
T Consensus 92 it~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~ 170 (262)
T 3nol_A 92 ISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEE 170 (262)
T ss_dssp EEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEE
T ss_pred EEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcc
Confidence 44445333 444468899999999999998887432 334455678888877778899999999998877765432 22
Q ss_pred c---ceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEeccc----------ceeeeEEEEcCCCcEEEeec
Q psy18231 461 D---FRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG----------KAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 461 v---~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----------~~~v~~l~~s~d~~~l~s~~ 523 (540)
+ ..+ .+. +|+..+..-.++.|.+.|..+++.+..+...+- ....+.++|+|+++.|..++
T Consensus 171 ~~~lNEL--e~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 171 LPELNEL--EWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CCCEEEE--EEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred cccccee--EEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 2 234 444 676565555788999999999999999874211 23568999999987777766
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.87 E-value=3.3e-06 Score=88.95 Aligned_cols=278 Identities=8% Similarity=0.073 Sum_probs=175.0
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEe-ecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEecc
Q psy18231 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY-GGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR 245 (540)
Q Consensus 167 v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (540)
|.++...++|++.+ ++.++-+..|+..+++..... ..+...|.++...+++.+.+ ++.++-+.+||..+++......
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeec
Confidence 88898888886554 555556888998776543321 12356788888888876555 4444448889987765443322
Q ss_pred c-------cCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccC
Q psy18231 246 E-------HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNG 318 (540)
Q Consensus 246 ~-------h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
. ....|.++...++|.+. .|+.+ -|.+||..+....... .
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~----------------------~--------- 299 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYS----------------------S--------- 299 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEEC----------------------C---------
T ss_pred CCCCccccCCCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEe----------------------c---------
Confidence 1 24569999998888744 45555 4888887654310000 0
Q ss_pred ceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-CeeEeeeCC
Q psy18231 319 LLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-HEILTASLD 397 (540)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~d 397 (540)
. ......-....|.++..++ ..+.+|+.+
T Consensus 300 ------------------------------------------------~--~~~~~~l~~~~i~~i~~D~~g~lWigt~~ 329 (795)
T 4a2l_A 300 ------------------------------------------------N--PVENGSLSQRSVRSIFMDSQGGMWLGTYF 329 (795)
T ss_dssp ------------------------------------------------C--TTSTTSCSSSCEEEEEECTTSCEEEEESS
T ss_pred ------------------------------------------------C--CCCCCCCCCCcEEEEEEeCCcCEEEEECC
Confidence 0 0000011235688888887 788889988
Q ss_pred CeEEEEeCCCCceEEe--------eeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhcc--------CcCCc
Q psy18231 398 CRIRRYDIRTGNLVTD--------YVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG--------HKSGD 461 (540)
Q Consensus 398 g~i~iwd~~~~~~~~~--------~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------~~~~v 461 (540)
+-|..|+..++....- +....|.++...++|++. +|+.++-|..||..+++....... ....|
T Consensus 330 ~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 408 (795)
T 4a2l_A 330 GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNI 408 (795)
T ss_dssp SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCE
T ss_pred CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccE
Confidence 8899998765543221 123469999998888754 567777799999876643221111 12345
Q ss_pred ceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe---cccceeeeEEEEcCCCcEEEeecCCeeEEEEccc
Q psy18231 462 FRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH---SVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 534 (540)
Q Consensus 462 ~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~~ 534 (540)
.++ +..++|+.|..|+.++-|..||..+++. ..+.. ......|.++...++|.+.+... +.|.+|+.++
T Consensus 409 ~~i--~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~ 480 (795)
T 4a2l_A 409 KAV--YVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQ 480 (795)
T ss_dssp EEE--EEETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTT
T ss_pred EEE--EEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCC
Confidence 555 6667777577778777899999777653 33321 01345799999999888776665 4577787654
No 254
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.81 E-value=5.1e-07 Score=88.02 Aligned_cols=90 Identities=6% Similarity=0.010 Sum_probs=61.8
Q ss_pred CeEEEEeccc--cch-hhhhccCcCCcceEEEEecCCCCeEEEe-eCCCcEEEEEecCCc------------ceeEEEec
Q psy18231 438 ECLRLFDKAT--GEL-LEEYKGHKSGDFRIECCLDSKDSQIFCG-SSDGKIYKWQLVDSS------------QISTLIHS 501 (540)
Q Consensus 438 g~i~i~d~~~--~~~-~~~~~~~~~~v~~~~~~~s~~~~~l~s~-s~dg~i~iwd~~~~~------------~~~~~~~~ 501 (540)
+.|.+.|.++ ++. +..+.....+ ..+ .++|||++++++ ..+.+|.++|+.+.+ ......
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~P-hGv--~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-- 328 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNP-HGC--NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-- 328 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSC-CCE--EECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--
T ss_pred CcEEEEeCcccCCceeEEEEecCCCc-eEE--EEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--
Confidence 3488888887 444 3444333222 334 799999986554 578899999998653 222222
Q ss_pred ccceeeeEEEEcCCCcEEEeec--CCeeEEEEccc
Q psy18231 502 VGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAEE 534 (540)
Q Consensus 502 ~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~~ 534 (540)
-......++|+|+| ++.+.. |++|..|+++.
T Consensus 329 -vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 329 -LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp -CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred -CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 33458899999999 555554 99999999976
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.79 E-value=2.2e-06 Score=85.91 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=65.3
Q ss_pred CEEEEeeCCCcEEEEcCCCCeeEEEeecCCcce---------eEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEecccc
Q psy18231 177 SYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV---------NDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREH 247 (540)
Q Consensus 177 ~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v---------~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h 247 (540)
..|++++.++.|.-+|..+|+.+.++....... ..++. .+..++.++.|+.|..+|..+|+.+...+..
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~ 146 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCC
Confidence 345555554459999999999998876432210 12233 3567888889999999999999988765432
Q ss_pred CC----cee-E-EEECC--CCC-EEEEec------CCCcEEEEEecCCC
Q psy18231 248 AS----KVT-C-VKFNE--DSS-VVISGS------QDNTVMMWDVKSRS 281 (540)
Q Consensus 248 ~~----~v~-~-~~~~~--~~~-~l~s~~------~dg~i~iwd~~~~~ 281 (540)
.. .+. . +.... +++ .+++++ .+|.|..+|..+++
T Consensus 147 ~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 21 111 0 11111 222 566654 37889999998887
No 256
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.78 E-value=7.1e-07 Score=77.69 Aligned_cols=116 Identities=9% Similarity=0.031 Sum_probs=80.8
Q ss_pred eeeecC--eEEEEeCCCCCEEEEeeCCC--cEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEe-eCCCeEEEEEc
Q psy18231 161 LFVLSG--LMHTRFPVDGSYCLTCGSDK--KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG-ASDKSVILWEV 235 (540)
Q Consensus 161 ~~h~~~--v~~v~~spdg~~lat~~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-s~dg~i~iwd~ 235 (540)
..|... ...+.|+ ++.+..+.+.+| .|+++|+++++.+.++.-. .........+++..|... -.++.+.++|.
T Consensus 37 ~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 37 YPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp EECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred ecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 345444 3778888 676666666665 9999999999999988643 344443344445555544 45889999999
Q ss_pred CCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCC
Q psy18231 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 236 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 281 (540)
.+.+.+.++..... =..++ ++++.|+.+..++.|.++|..+.+
T Consensus 115 ~t~~~~~ti~~~~e-G~glt--~dg~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 115 RNLRQVRSFNYDGE-GWGLT--HNDQYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp TTCCEEEEEECSSC-CCCEE--ECSSCEEECCSSSEEEEECTTTCS
T ss_pred ccCcEEEEEECCCC-ceEEe--cCCCEEEEECCCCeEEEEcCCCCe
Confidence 99999988864322 23344 467777776667889999988766
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.78 E-value=5.6e-06 Score=74.43 Aligned_cols=218 Identities=6% Similarity=-0.058 Sum_probs=133.1
Q ss_pred cCeEEEEeCCCCCEEEEe-eCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeE-EEeeCCCeEEEEEcCCCceeE
Q psy18231 165 SGLMHTRFPVDGSYCLTC-GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI-ASGASDKSVILWEVTTGQPVR 242 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~ 242 (540)
..+..++|+++++.|+.+ ..++.|..++.........+.........+++.|++..| ++-...+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 457899999976666644 457899999987655433333333567899999975555 455557899999986443222
Q ss_pred eccccCCceeEEEECCCCCEEEEecC---CCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCc
Q psy18231 243 RWREHASKVTCVKFNEDSSVVISGSQ---DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319 (540)
Q Consensus 243 ~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (540)
...........++++|++..|+.+.. .+.|..+++.......+
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~---------------------------------- 161 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL---------------------------------- 161 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE----------------------------------
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE----------------------------------
Confidence 22222246789999996665555443 35677777643221000
Q ss_pred eeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Cee-EeeeC
Q psy18231 320 LTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI-LTASL 396 (540)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l-~~~~~ 396 (540)
....-.....+++++ +.| ++-..
T Consensus 162 ------------------------------------------------------~~~~~~~P~gia~d~~~~~lyv~d~~ 187 (267)
T 1npe_A 162 ------------------------------------------------------AQDNLGLPNGLTFDAFSSQLCWVDAG 187 (267)
T ss_dssp ------------------------------------------------------ECTTCSCEEEEEEETTTTEEEEEETT
T ss_pred ------------------------------------------------------EECCCCCCcEEEEcCCCCEEEEEECC
Confidence 000112356777776 444 44456
Q ss_pred CCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcC-CcceEEEEecCCCC
Q psy18231 397 DCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKS-GDFRIECCLDSKDS 473 (540)
Q Consensus 397 dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~s~~~~ 473 (540)
.+.|..+|.........+.. .....++.. ++.++++...++.|..+|..+++.+.++..... ....+ ++.|++.
T Consensus 188 ~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi--~~~~~~~ 263 (267)
T 1npe_A 188 THRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGI--TIALSQC 263 (267)
T ss_dssp TTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCE--EEECSCC
T ss_pred CCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcccccccccee--eecCccC
Confidence 68999999986544333333 334566654 455555555678999999998988777754331 24455 5666653
No 258
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.76 E-value=4.7e-05 Score=79.93 Aligned_cols=331 Identities=9% Similarity=0.078 Sum_probs=176.0
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEee-------cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-------GHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 237 (540)
..|.++...++|.+.+ |+.++-+..||..+++...... -....|.++...+++.+.+. +.+ -+.+||..+
T Consensus 163 ~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwig-t~~-Gl~~~d~~~ 239 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIG-TSK-GLALFNANT 239 (781)
T ss_dssp CCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEE-ETT-EEEEEETTT
T ss_pred cceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEE-eCC-cHheECCCC
Confidence 4578888877876544 5556568889987765433211 01356888888877775554 444 588899876
Q ss_pred CceeEecc-------ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecc
Q psy18231 238 GQPVRRWR-------EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310 (540)
Q Consensus 238 ~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (540)
++...... .....|.++...++|. |..|+..+-|.++|..+........... ..+...
T Consensus 240 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f--------------~~~~~~ 304 (781)
T 3v9f_A 240 ETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRF--------------EFIREG 304 (781)
T ss_dssp TEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------C--------------EEECBC
T ss_pred CcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeecccc--------------ccccCC
Confidence 65432211 1245699999888776 5556664568888887654211110000 000000
Q ss_pred c-ccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhh-----hhhcccccEEEE
Q psy18231 311 T-KNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQ-----ALKEARDSITSV 384 (540)
Q Consensus 311 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~l 384 (540)
. ...+. ...+..+....++.+-+....+.....+........-... ........|.++
T Consensus 305 ~~~~~l~----------------~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i 368 (781)
T 3v9f_A 305 DNNYSLS----------------NASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSV 368 (781)
T ss_dssp SSTTSBS----------------SSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEE
T ss_pred CCCCCCC----------------CCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEE
Confidence 0 00000 0011111111122222222111111111100000000000 001123568899
Q ss_pred EecC-CeeEeeeCCCeEEEEeCCCCceEE-----eeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhc--c
Q psy18231 385 HVSD-HEILTASLDCRIRRYDIRTGNLVT-----DYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK--G 456 (540)
Q Consensus 385 ~~~~-~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~ 456 (540)
...+ ..+.+|+.++-|..||..+++... .+....|.++...++|++.+ |+.++-+..+|..+++...... .
T Consensus 369 ~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~ 447 (781)
T 3v9f_A 369 CDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKN 447 (781)
T ss_dssp EECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTT
T ss_pred EEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCC
Confidence 8887 788888877779999987654332 12235789998888877555 6666779999987665322111 1
Q ss_pred CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEec---ccceeeeEEEEcCCCcEEEeecCCeeEEEEcc
Q psy18231 457 HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS---VGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533 (540)
Q Consensus 457 ~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~ 533 (540)
....|.++ ...++|.+ ..|+. +-|..||..+++........ .....|.++...++|.+.+...++.|..|+.+
T Consensus 448 ~~~~v~~i--~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~ 523 (781)
T 3v9f_A 448 ELLDVRVF--YEDKNKKI-WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPD 523 (781)
T ss_dssp CCCCEEEE--EECTTSEE-EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTT
T ss_pred CCCeEEEE--EECCCCCE-EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCC
Confidence 23345554 56666654 44455 56889997766544332210 11357999999999987776654446667654
Q ss_pred c
Q psy18231 534 E 534 (540)
Q Consensus 534 ~ 534 (540)
+
T Consensus 524 ~ 524 (781)
T 3v9f_A 524 M 524 (781)
T ss_dssp C
T ss_pred C
Confidence 3
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.73 E-value=3.9e-06 Score=77.85 Aligned_cols=135 Identities=10% Similarity=-0.027 Sum_probs=83.3
Q ss_pred CCeEEEEeCCCCceEEeeeC-CceEEEEEecCCcEEEee-cCCCeEEEEeccccch--hhhhccCcCCcceEEEEecCCC
Q psy18231 397 DCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTC-STDECLRLFDKATGEL--LEEYKGHKSGDFRIECCLDSKD 472 (540)
Q Consensus 397 dg~i~iwd~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~ 472 (540)
++.|..||..+++....... .....++++|+++.|+++ +.++.|.+|++..... ...+....+ ...+ ++.++|
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi--~~d~~G 240 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNI--KRNADG 240 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEE--EECTTS
T ss_pred CceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCe--EECCCC
Confidence 46788888876654332222 445679999999866555 5678999999874321 111111112 2334 788999
Q ss_pred CeEEEeeC----------CCcEEEEEecCCcceeEEEeccc--ceeeeEEEEcCCCcEEEeec-CCeeEEEEccccc
Q psy18231 473 SQIFCGSS----------DGKIYKWQLVDSSQISTLIHSVG--KAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDY 536 (540)
Q Consensus 473 ~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~~~~ 536 (540)
++.++... .+.|..+|. +++.+..+..+.. ...++.+++ .++++.++.. .+.|..++++..+
T Consensus 241 ~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 241 HFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp CEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC----
T ss_pred CEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccccc
Confidence 87666544 467888884 5777777763211 245777777 4666666666 8899999987544
No 260
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.73 E-value=6.9e-05 Score=78.69 Aligned_cols=325 Identities=9% Similarity=0.026 Sum_probs=174.6
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEee-------cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-------GHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 237 (540)
..|.++...++|.+.+ |+.+ -+.+||..+++...... .....|.++...++|. |..|+..+-|.++|..+
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC
Confidence 4689999988887655 4444 68899987765432211 1245688888887776 55566545688889876
Q ss_pred CceeEecc--------------ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeE
Q psy18231 238 GQPVRRWR--------------EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITS 303 (540)
Q Consensus 238 ~~~~~~~~--------------~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (540)
++...... -....|.++...++|. |..|+.++-|..++.............. .
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~----~-------- 354 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPT----Q-------- 354 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC--------C--------
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCcc----c--------
Confidence 65322111 1346799999988876 6667766778888876543211100000 0
Q ss_pred EEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEE
Q psy18231 304 VHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITS 383 (540)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 383 (540)
.....+. ...+..+....++.+.+....+.....+........ ...........|.+
T Consensus 355 ------~~~~~l~----------------~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 355 ------MNESSLS----------------NKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIY-NKENRELLSNSVLC 411 (781)
T ss_dssp ------CCSSCCS----------------SSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEEC-C-----CCCSBEEE
T ss_pred ------cccCCCC----------------CcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEE-ccCCCCCCCcceEE
Confidence 0000000 001111111111112111111111111000000000 00000123467889
Q ss_pred EEecC-CeeEeeeCCCeEEEEeCCCCceEEee----eCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccC-
Q psy18231 384 VHVSD-HEILTASLDCRIRRYDIRTGNLVTDY----VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH- 457 (540)
Q Consensus 384 l~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~- 457 (540)
+...+ ..|.+|+.++-|..+|..+++..... ....|.++...++|++.+. +. +-|..||..+++........
T Consensus 412 i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~ 489 (781)
T 3v9f_A 412 SLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSN 489 (781)
T ss_dssp EEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTT
T ss_pred EEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcc
Confidence 98876 77888888788999998877654322 2357899998888876554 44 55889998776543221111
Q ss_pred ----cCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEe--cccceeeeEEEEcCCCcEEEeecCCeeEEEE
Q psy18231 458 ----KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH--SVGKAVVNSLCSHPTRKHIMSACGNNVKLWT 531 (540)
Q Consensus 458 ----~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~ 531 (540)
...+.++ ...++|.+.+ |+.++-|..||..+++ ...+.. ......|.++...++|.+.++..+|-|..|+
T Consensus 490 ~~~~~~~i~~i--~~d~~g~lWi-gt~~~Gl~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d 565 (781)
T 3v9f_A 490 SQLLENFVRSI--AQDSEGRFWI-GTFGGGVGIYTPDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPS 565 (781)
T ss_dssp SSCSCSCEEEE--EECTTCCEEE-EESSSCEEEECTTCCE-EEEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESC
T ss_pred cccccceeEEE--EEcCCCCEEE-EEcCCCEEEEeCCCCe-EEEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEEC
Confidence 2344444 6777776544 4443447778865543 333321 0123568999999999877665555447776
Q ss_pred ccc
Q psy18231 532 AEE 534 (540)
Q Consensus 532 ~~~ 534 (540)
..+
T Consensus 566 ~~~ 568 (781)
T 3v9f_A 566 ARN 568 (781)
T ss_dssp TTT
T ss_pred CCC
Confidence 543
No 261
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.72 E-value=9.9e-07 Score=76.73 Aligned_cols=136 Identities=6% Similarity=-0.083 Sum_probs=96.0
Q ss_pred EEecC-CeeEeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCc--CC
Q psy18231 384 VHVSD-HEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SG 460 (540)
Q Consensus 384 l~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~ 460 (540)
+++.+ .+.++.-.++.+.+||.++.+.+.++.-.. ....+.+|++.|+.+..++.|+++|..+.+.+.++.... .+
T Consensus 101 it~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~-eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~ 179 (268)
T 3nok_A 101 LASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSG-EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP 179 (268)
T ss_dssp EEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSS-CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred EEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCC-ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 45555 444455578999999999999998887421 123344678888887789999999999998877765422 22
Q ss_pred c---ceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecc-----------cceeeeEEEEcCCCcEEEeec
Q psy18231 461 D---FRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV-----------GKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 461 v---~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~s~~ 523 (540)
+ ..+ .|. +|+..+....++.|.+.|..+++.+..+...+ .....+.+||+|+++.|+.++
T Consensus 180 v~~lNeL--e~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 180 VELINEL--ECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CCCEEEE--EEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccccc--EEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 2 333 444 67655555568899999999999999987431 124679999999876655554
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.71 E-value=2.4e-06 Score=73.78 Aligned_cols=136 Identities=10% Similarity=-0.015 Sum_probs=95.6
Q ss_pred EEecC-CeeEeeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCc--CC
Q psy18231 384 VHVSD-HEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SG 460 (540)
Q Consensus 384 l~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~ 460 (540)
+++.. ......-.++.+.+||.++.+.+.++.... ....+.++++.|+.+..++.|.++|..+.+.+.++.... .+
T Consensus 70 i~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~ 148 (243)
T 3mbr_X 70 IVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP 148 (243)
T ss_dssp EEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred EEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc
Confidence 34444 344445568999999999999998887421 223445678877777788999999999988877765432 12
Q ss_pred ---cceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecc-----------cceeeeEEEEcCCCcEEEeec
Q psy18231 461 ---DFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV-----------GKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 461 ---v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~s~~ 523 (540)
+..+ .+. +|+..+..-.+..|.+.|..+++.+..+...+ .....+.++++|+++.|...+
T Consensus 149 ~~~lNeL--e~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 149 LDNLNEL--EWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCCEEEE--EEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred cccceee--EEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 2233 333 66655555567899999999999999987432 124679999999877666665
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.69 E-value=3.1e-06 Score=78.49 Aligned_cols=103 Identities=17% Similarity=0.034 Sum_probs=64.1
Q ss_pred EEEEecC--CeeEee-eCCCeEEEEeCCCC---c--eEEeeeCCceEEEEEecCCcEEEeecC----------CCeEEEE
Q psy18231 382 TSVHVSD--HEILTA-SLDCRIRRYDIRTG---N--LVTDYVGEPIVDACFTRDCQCILTCST----------DECLRLF 443 (540)
Q Consensus 382 ~~l~~~~--~~l~~~-~~dg~i~iwd~~~~---~--~~~~~~~~~i~~~~~sp~~~~l~~~~~----------dg~i~i~ 443 (540)
..+++++ +.+.++ +..+.|..|++... . ....+. . ...++++++|++.++... .+.|..+
T Consensus 188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~-g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~ 265 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP-N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKF 265 (322)
T ss_dssp CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS-S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEE
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC-C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEE
Confidence 4577887 445444 56689999998752 1 122222 2 778999999987766544 4678888
Q ss_pred eccccchhhhhccCc----CCcceEEEEecCCCCeEEEeeCCCcEEEEEec
Q psy18231 444 DKATGELLEEYKGHK----SGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490 (540)
Q Consensus 444 d~~~~~~~~~~~~~~----~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~ 490 (540)
|. .++.+..+.... ..+..+ ++ .+++++++...++.|.++++.
T Consensus 266 d~-~G~~~~~~~~~~g~~~~~~~~~--~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 266 DE-FGNILEVIPLPPPFAGEHFEQI--QE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp CT-TSCEEEEEECCTTTTTSCCCEE--EE-ETTEEEEECSSCSEEEEEEC-
T ss_pred CC-CCCEEEEEECCCCCccccceEE--EE-eCCEEEEeecCCCceEEEecc
Confidence 86 466665554332 223334 34 356556666677888888864
No 264
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.65 E-value=1.9e-06 Score=75.02 Aligned_cols=108 Identities=8% Similarity=0.033 Sum_probs=76.7
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeE-EEeeCCCeEEEEEcCCCceeEeccc
Q psy18231 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI-ASGASDKSVILWEVTTGQPVRRWRE 246 (540)
Q Consensus 168 ~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~ 246 (540)
..+.|+ ++.+..+.+.+|.|+++|+++++.+.++ - ..........+++..| +..-.++.+.++|..+.+.+.++..
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 577776 3556667778899999999999988887 2 2334443333444444 4455688999999999999988864
Q ss_pred cCCceeEEEECCCCCEEEEecCCCcEEEEEecCCC
Q psy18231 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 247 h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 281 (540)
.. .-..++ +|++.|+.+..++.|.++|..+.+
T Consensus 135 ~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 135 SG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp SS-CCCCEE--EETTEEEEECSSSEEEEECTTTCC
T ss_pred CC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCe
Confidence 32 224444 467777777778899999988876
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.63 E-value=5.8e-05 Score=69.26 Aligned_cols=235 Identities=11% Similarity=0.041 Sum_probs=133.7
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCC--eEEEEEcCCCceeE
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK--SVILWEVTTGQPVR 242 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg--~i~iwd~~~~~~~~ 242 (540)
.....++|+++|+++++-..++.|..||.... ....+. .......+++.++++++++..... .|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45678999999997777667899999997653 333333 345788999999999766654432 46667777776543
Q ss_pred ecc-ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCcee
Q psy18231 243 RWR-EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLT 321 (540)
Q Consensus 243 ~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (540)
... ........++..+++..+++-..++.|.++|...++.....
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~----------------------------------- 154 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWL----------------------------------- 154 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEE-----------------------------------
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEE-----------------------------------
Confidence 221 11223345555555555555545787777776543100000
Q ss_pred eEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecCC-eeEeeeCCCeE
Q psy18231 322 KLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDH-EILTASLDCRI 400 (540)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~~~dg~i 400 (540)
.. +. .... .....-.....+..+.+ ++++-...+.|
T Consensus 155 ----------------------------~~--~~-----~~~~--------~~~~~~~~pngis~dg~~lyv~d~~~~~I 191 (306)
T 2p4o_A 155 ----------------------------EH--PM-----LARS--------NSESVFPAANGLKRFGNFLYVSNTEKMLL 191 (306)
T ss_dssp ----------------------------EC--GG-----GSCS--------STTCCSCSEEEEEEETTEEEEEETTTTEE
T ss_pred ----------------------------EC--Cc-----cccc--------cccCCCCcCCCcCcCCCEEEEEeCCCCEE
Confidence 00 00 0000 00000012223333333 34455567889
Q ss_pred EEEeCCC-Cce--EEee-eCCceEEEEEecCCcEEEeecCCCeEEEEeccccch--hhhhccCcCCcceEEEEec---CC
Q psy18231 401 RRYDIRT-GNL--VTDY-VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL--LEEYKGHKSGDFRIECCLD---SK 471 (540)
Q Consensus 401 ~iwd~~~-~~~--~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s---~~ 471 (540)
..||+.. ++. ...+ .......++++++|+++++....+.|.++|.. ++. +..+........++ +|. ++
T Consensus 192 ~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~--a~~g~~~d 268 (306)
T 2p4o_A 192 LRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAV--AFGQTEGD 268 (306)
T ss_dssp EEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEE--EECCSTTT
T ss_pred EEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEE--EEecccCC
Confidence 9999874 321 1111 12345678999999988877778899999975 544 22233222223344 787 78
Q ss_pred CCeEEEeeCCC
Q psy18231 472 DSQIFCGSSDG 482 (540)
Q Consensus 472 ~~~l~s~s~dg 482 (540)
++.|+.++..+
T Consensus 269 ~~~LyVt~~~~ 279 (306)
T 2p4o_A 269 CTAIYVVTNGG 279 (306)
T ss_dssp TTEEEEEECTT
T ss_pred CCEEEEECCCC
Confidence 77777665543
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.63 E-value=3.2e-05 Score=71.02 Aligned_cols=233 Identities=9% Similarity=0.007 Sum_probs=132.7
Q ss_pred CCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCC--cE
Q psy18231 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TV 272 (540)
Q Consensus 195 ~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i 272 (540)
..+.+..+... .....++|+++++++++-..++.|..||... +....+. ....+..+++.++++++++..... .|
T Consensus 21 ~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 21 PAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPV 97 (306)
T ss_dssp CEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceE
Confidence 34555556432 4577899999999777777889999999764 3333332 345688999999998665543322 35
Q ss_pred EEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeec
Q psy18231 273 MMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352 (540)
Q Consensus 273 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (540)
..+|..+++...+. .
T Consensus 98 ~~~d~~~g~~~~~~----------------------------------------------------------------~- 112 (306)
T 2p4o_A 98 VSLVKSDGTVETLL----------------------------------------------------------------T- 112 (306)
T ss_dssp EEEECTTSCEEEEE----------------------------------------------------------------E-
T ss_pred EEEcCCCCeEEEEE----------------------------------------------------------------e-
Confidence 55665554410000 0
Q ss_pred ccceecccccccccccchhhhhhcccccEEEEEecC-Ce-eEeeeCCCeEEEEeCCCCce-EEee---------eC--Cc
Q psy18231 353 LGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-HE-ILTASLDCRIRRYDIRTGNL-VTDY---------VG--EP 418 (540)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~-l~~~~~dg~i~iwd~~~~~~-~~~~---------~~--~~ 418 (540)
.. .......++..+ .. +++-..++.|..+|..+++. +... .. ..
T Consensus 113 ---------------------~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 113 ---------------------LP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp ---------------------CT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred ---------------------CC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 00 000011112122 33 33333577888888765421 1100 01 23
Q ss_pred eEEEEEecCCcEEEe-ecCCCeEEEEeccc-cch--hhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc
Q psy18231 419 IVDACFTRDCQCILT-CSTDECLRLFDKAT-GEL--LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 419 i~~~~~sp~~~~l~~-~~~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~ 494 (540)
...+ +|+++.|+. -...+.|..||+.. ++. ...+... .....+ +++++|+++++....+.|.++|. +++.
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi--~vd~dG~l~va~~~~~~V~~~~~-~G~~ 244 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDF--AFDVEGNLYGATHIYNSVVRIAP-DRST 244 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSE--EEBTTCCEEEECBTTCCEEEECT-TCCE
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCe--EECCCCCEEEEeCCCCeEEEECC-CCCE
Confidence 4445 888875554 45578999999864 321 1111111 122335 78899988777777889999995 4655
Q ss_pred eeEEEecccceeeeEEEEc---CCCcEEEeec
Q psy18231 495 ISTLIHSVGKAVVNSLCSH---PTRKHIMSAC 523 (540)
Q Consensus 495 ~~~~~~~~~~~~v~~l~~s---~d~~~l~s~~ 523 (540)
.............++++|. ||++.|+.++
T Consensus 245 ~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 245 TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred EEEeecccccCCceEEEEecccCCCCEEEEEC
Confidence 3322211223568999998 8877666554
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.52 E-value=0.00015 Score=67.79 Aligned_cols=240 Identities=7% Similarity=-0.073 Sum_probs=140.0
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEE-EeeCCCeEEEEEcCCCceeEec
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA-SGASDKSVILWEVTTGQPVRRW 244 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~ 244 (540)
..+|.+..+++ +|+.+. ...|+..++........+.. ......++|++.+..|. +-...+.|..+++..+.....+
T Consensus 35 ~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 35 RRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp SSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 34566666644 444333 45688888866554444443 44578999997655555 4456788999998766544433
Q ss_pred cccCCceeEEEECCC-CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeE
Q psy18231 245 REHASKVTCVKFNED-SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKL 323 (540)
Q Consensus 245 ~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (540)
.........+++.+. +++.++-...+.|.+.++.......+
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l-------------------------------------- 153 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL-------------------------------------- 153 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--------------------------------------
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE--------------------------------------
Confidence 333345678899874 44555555567888888764321000
Q ss_pred EEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeE-eeeCC-Ce
Q psy18231 324 VFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEIL-TASLD-CR 399 (540)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~-~~~~d-g~ 399 (540)
....-.....++++| ..+. +-... +.
T Consensus 154 --------------------------------------------------~~~~l~~P~~iavdp~~g~ly~td~~~~~~ 183 (349)
T 3v64_C 154 --------------------------------------------------LWQSLEKPRAIALHPMEGTIYWTDWGNTPR 183 (349)
T ss_dssp --------------------------------------------------ECTTCSCEEEEEEETTTTEEEEEECSSSCE
T ss_pred --------------------------------------------------EeCCCCCcceEEEecCcCeEEEeccCCCCE
Confidence 001112346777776 4444 33344 77
Q ss_pred EEEEeCCCCceEEeee--CCceEEEEEecCCcEEEe-ecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEE
Q psy18231 400 IRRYDIRTGNLVTDYV--GEPIVDACFTRDCQCILT-CSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 476 (540)
Q Consensus 400 i~iwd~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~ 476 (540)
|..++++......... ......++++|++..|+. -...+.|..+|+........+.........+ ++ ..+..++
T Consensus 184 I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi--av-~~~~ly~ 260 (349)
T 3v64_C 184 IEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAI--TV-FEDSLYW 260 (349)
T ss_dssp EEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEE--EE-ETTEEEE
T ss_pred EEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEE--EE-ECCEEEE
Confidence 8888887543322222 245789999986655544 4556789999976432221122222222344 44 2444555
Q ss_pred EeeCCCcEEEEEecCCcceeEEE
Q psy18231 477 CGSSDGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 477 s~s~dg~i~iwd~~~~~~~~~~~ 499 (540)
+-...+.|..++..+++.+..+.
T Consensus 261 td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 261 TDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EETTTTEEEEEETTTCCSCEEEE
T ss_pred ecCCCCeEEEEEccCCCccEEec
Confidence 55567788888877777766665
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.52 E-value=7.3e-06 Score=85.30 Aligned_cols=112 Identities=12% Similarity=0.044 Sum_probs=75.7
Q ss_pred CeEEEEeC-CCCCEEEEee-CC----CcEEEEcCCCC-eeEEE-eecCCcceeEEEEeeCCCeEEEeeCC-----CeEEE
Q psy18231 166 GLMHTRFP-VDGSYCLTCG-SD----KKIKLWNPYRN-LLLKT-YGGHAHEVNDATAACDSSQIASGASD-----KSVIL 232 (540)
Q Consensus 166 ~v~~v~~s-pdg~~lat~~-~d----g~i~iwd~~~~-~~~~~-~~~h~~~v~~l~~sp~~~~l~s~s~d-----g~i~i 232 (540)
.+...+|| |||++||-+. .+ .+|+++|+.++ +.+.. +. .....++|+||++.|+....| ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 9999988443 22 35999999988 63211 11 224578999999988877665 36888
Q ss_pred EEcCCCce--eEecc-ccCCceeEEEECCCCCEEEEecC---CCcEEEEEecCC
Q psy18231 233 WEVTTGQP--VRRWR-EHASKVTCVKFNEDSSVVISGSQ---DNTVMMWDVKSR 280 (540)
Q Consensus 233 wd~~~~~~--~~~~~-~h~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~ 280 (540)
+++.+++. ...+. ........+.|+|||++|+..+. ...|.++|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 88877642 22222 22345677899999998876553 235777777654
No 269
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.52 E-value=2.9e-05 Score=67.04 Aligned_cols=110 Identities=11% Similarity=0.055 Sum_probs=76.3
Q ss_pred eEEEEeCCCCCEEEEeeCC--CcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCe-EEEeeCCCeEEEEEcCCCceeEe
Q psy18231 167 LMHTRFPVDGSYCLTCGSD--KKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IASGASDKSVILWEVTTGQPVRR 243 (540)
Q Consensus 167 v~~v~~spdg~~lat~~~d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~-l~s~s~dg~i~iwd~~~~~~~~~ 243 (540)
...+.|++ +.+..+.+.+ +.|+.+|+++++.+.++.-.. ........+++.. ....-.++.+.++|..+.+.+.+
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 55788886 5555565654 489999999999998886432 3333333333444 44455689999999999999988
Q ss_pred ccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCC
Q psy18231 244 WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 244 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 281 (540)
+..... =..++ +++..|+.+..++.|.++|..+.+
T Consensus 101 i~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 101 FRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp EECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCC
T ss_pred EeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCe
Confidence 864332 24554 456666666668899999988876
No 270
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.47 E-value=0.00068 Score=62.65 Aligned_cols=149 Identities=8% Similarity=0.048 Sum_probs=82.7
Q ss_pred ccEEEEEecC-CeeEeeeCCCeEEE-EeC--CCCceEEeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhh
Q psy18231 379 DSITSVHVSD-HEILTASLDCRIRR-YDI--RTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 454 (540)
Q Consensus 379 ~~v~~l~~~~-~~l~~~~~dg~i~i-wd~--~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 454 (540)
..+..+.+.+ ..++..+.+|.+.. .|- .+-+.+.......+..+.++++++.+++ +.+|.+++.+...++.-..+
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~ 241 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGEL 241 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCC
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEec
Confidence 3566777776 44444445555443 332 2333333223457888999999876654 45788877643323322222
Q ss_pred cc----CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEec-ccceeeeEEEEcCCCcEEEeecCCeeEE
Q psy18231 455 KG----HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS-VGKAVVNSLCSHPTRKHIMSACGNNVKL 529 (540)
Q Consensus 455 ~~----~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~d~~~l~s~~d~~i~i 529 (540)
.. +...+..+ ++.+++..++++. +|.| .+....++.-..+... .....+.++.|.+++..++.+.+|.|.-
T Consensus 242 ~~~~~~~~~~~~~v--~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~ 317 (327)
T 2xbg_A 242 LSPLRRNSVGFLDL--AYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLR 317 (327)
T ss_dssp BCTTSSCCSCEEEE--EESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEE
T ss_pred cCCcccCCcceEEE--EecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEE
Confidence 21 11224444 6777777666554 6766 3444445544444311 1235678899987777666666997766
Q ss_pred EEc
Q psy18231 530 WTA 532 (540)
Q Consensus 530 w~~ 532 (540)
++-
T Consensus 318 ~~~ 320 (327)
T 2xbg_A 318 YVT 320 (327)
T ss_dssp ECC
T ss_pred EcC
Confidence 553
No 271
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.45 E-value=4e-06 Score=86.03 Aligned_cols=72 Identities=14% Similarity=0.214 Sum_probs=50.3
Q ss_pred eEEEEee-CCCeEEEeeCCC-----------eEEEEEcCCCceeE--ecc-ccCCceeEEEECCCCCEEEEecC-CCcEE
Q psy18231 210 NDATAAC-DSSQIASGASDK-----------SVILWEVTTGQPVR--RWR-EHASKVTCVKFNEDSSVVISGSQ-DNTVM 273 (540)
Q Consensus 210 ~~l~~sp-~~~~l~s~s~dg-----------~i~iwd~~~~~~~~--~~~-~h~~~v~~~~~~~~~~~l~s~~~-dg~i~ 273 (540)
..+++.+ +++.++.|+.+. .+.+||..+++... .+. .+.....++++..++++++.|+. +..+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 3567777 888888887543 68899998876332 221 23334456788889999999984 45799
Q ss_pred EEEecCCC
Q psy18231 274 MWDVKSRS 281 (540)
Q Consensus 274 iwd~~~~~ 281 (540)
+||..+.+
T Consensus 269 ~yd~~t~~ 276 (656)
T 1k3i_A 269 LYDSSSDS 276 (656)
T ss_dssp EEEGGGTE
T ss_pred EecCcCCc
Confidence 99987654
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.43 E-value=0.00018 Score=63.00 Aligned_cols=201 Identities=7% Similarity=0.119 Sum_probs=130.8
Q ss_pred ecCeEEEEeCCCCCEEE-EeeCCCcEEEEcCCCCeeEEEeec-CCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCcee
Q psy18231 164 LSGLMHTRFPVDGSYCL-TCGSDKKIKLWNPYRNLLLKTYGG-HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPV 241 (540)
Q Consensus 164 ~~~v~~v~~spdg~~la-t~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 241 (540)
.+.+..++|+|++..|+ +...++.|...|.. ++.+..+.- -......+++.+++.++++.-.++.+.++++.....+
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 35799999999876555 56778899999987 888887742 2356788899988887777666788999988655422
Q ss_pred ---Eecc------ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccc
Q psy18231 242 ---RRWR------EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTK 312 (540)
Q Consensus 242 ---~~~~------~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
.... ........++|+|+++.|+++.+.....+|.+..... ...
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~-~~~-------------------------- 157 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLS-SNE-------------------------- 157 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTC-SSC--------------------------
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccccc-CCc--------------------------
Confidence 2221 2344568999999988888877766667777652110 000
Q ss_pred cccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC---C
Q psy18231 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD---H 389 (540)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~ 389 (540)
+.+.+ .... .-..+...+.+++++| .
T Consensus 158 ----------------------------------l~i~~----------------~~~~-~~~~~~~d~S~l~~dp~tg~ 186 (255)
T 3qqz_A 158 ----------------------------------LHISK----------------DKAL-QRQFTLDDVSGAEFNQQKNT 186 (255)
T ss_dssp ----------------------------------CEEEE----------------CHHH-HHTCCSSCCCEEEEETTTTE
T ss_pred ----------------------------------eeeec----------------chhh-ccccccCCceeEEEcCCCCe
Confidence 00000 0000 0011123457888888 5
Q ss_pred eeEeeeCCCeEEEEeCCCCceEEeee--C---------CceEEEEEecCCcEEEeecCCCeEEEEec
Q psy18231 390 EILTASLDCRIRRYDIRTGNLVTDYV--G---------EPIVDACFTRDCQCILTCSTDECLRLFDK 445 (540)
Q Consensus 390 ~l~~~~~dg~i~iwd~~~~~~~~~~~--~---------~~i~~~~~sp~~~~l~~~~~dg~i~i~d~ 445 (540)
+++....+..+..+|.. ++.+..+. . ..--.++|.++|++.++ ++-+.++.|.-
T Consensus 187 lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 187 LLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 67777788889999977 44544442 1 25689999999985555 66677777754
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.43 E-value=0.00018 Score=68.19 Aligned_cols=240 Identities=6% Similarity=-0.078 Sum_probs=139.4
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeE-EEeeCCCeEEEEEcCCCceeEec
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI-ASGASDKSVILWEVTTGQPVRRW 244 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~~~~~~~~~ 244 (540)
.-+|.+..+++ +|+.+. ...|+..++........+. .......++|.+.+..| ++-...+.|..+++..+.....+
T Consensus 78 ~~~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 78 RRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp SSCEEECSSCC-EEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred CCeECCccccc-eeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence 34455556644 444433 4678888987665544444 34557899999755555 45556788999998766544433
Q ss_pred cccCCceeEEEECCCC-CEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeE
Q psy18231 245 REHASKVTCVKFNEDS-SVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKL 323 (540)
Q Consensus 245 ~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (540)
.........+++.+.+ .+.++-...+.|.+.++.......
T Consensus 155 ~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~--------------------------------------- 195 (386)
T 3v65_B 155 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV--------------------------------------- 195 (386)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE---------------------------------------
T ss_pred eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE---------------------------------------
Confidence 3333455778888744 444555556677776665332100
Q ss_pred EEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEee-eCC-Ce
Q psy18231 324 VFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTA-SLD-CR 399 (540)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~-~~d-g~ 399 (540)
.....-.....++++| ..|..+ ... +.
T Consensus 196 -------------------------------------------------l~~~~l~~P~giavdp~~g~ly~td~~~~~~ 226 (386)
T 3v65_B 196 -------------------------------------------------LLWQSLEKPRAIALHPMEGTIYWTDWGNTPR 226 (386)
T ss_dssp -------------------------------------------------EECSSCSCEEEEEEETTTTEEEEEECSSSCE
T ss_pred -------------------------------------------------eecCCCCCCcEEEEEcCCCeEEEeccCCCCE
Confidence 0001112346677775 444433 334 67
Q ss_pred EEEEeCCCCceEEeeeC--CceEEEEEecCCcEEE-eecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEE
Q psy18231 400 IRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCIL-TCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 476 (540)
Q Consensus 400 i~iwd~~~~~~~~~~~~--~~i~~~~~sp~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~ 476 (540)
|..++++.......... .....++++|++..|+ +-+..+.|..+|+........+.........+ ++ ..+..++
T Consensus 227 I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gi--av-~~~~ly~ 303 (386)
T 3v65_B 227 IEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAI--TV-FEDSLYW 303 (386)
T ss_dssp EEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEE--EE-ETTEEEE
T ss_pred EEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEE--EE-ECCEEEE
Confidence 88888875433322222 4578999998665554 44557889999976432221222122222344 45 3445556
Q ss_pred EeeCCCcEEEEEecCCcceeEEE
Q psy18231 477 CGSSDGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 477 s~s~dg~i~iwd~~~~~~~~~~~ 499 (540)
+-...+.|..++..+++.+..+.
T Consensus 304 td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 304 TDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EETTTTEEEEEETTTCCSCEEEE
T ss_pred eeCCCCeEEEEECCCCcceEEEc
Confidence 66677889888877888777776
No 274
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=98.38 E-value=3.8e-07 Score=85.05 Aligned_cols=112 Identities=12% Similarity=0.077 Sum_probs=80.0
Q ss_pred cceecCCceEEeccCCC-------CCHHHHHHHHHcCCCEEEeeeeecccccccc--------hhh---ccccc--cCCC
Q psy18231 10 RSTLLKNLKHCDSTLWT-------SKLNFRQLVRSHNVDLCFTPMIIADSFIKSS--------KAR---NNEFS--TSPE 69 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~-------~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~--~~~~ 69 (540)
+.+.+++|+++|||++. |+..+|..+++.++++++||++.....-+.. ... .+.+. .+..
T Consensus 18 g~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~ 97 (377)
T 2r14_A 18 GSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEAVHAK 97 (377)
T ss_dssp TTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHHHHHHHT
T ss_pred CCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHHHHHhhc
Confidence 46889999999999988 9999999999999999999998765322221 111 22221 3566
Q ss_pred CCCEEEEEecC-------------------------------------------Ch------------hHHHHHHHHhc-
Q psy18231 70 DTPLVVQFASN-------------------------------------------NH------------DDFVRATQYVA- 93 (540)
Q Consensus 70 ~~~~~~q~~~~-------------------------------------------~~------------~~~~~~~~~~~- 93 (540)
+.++++|++.. .| +++++||+...
T Consensus 98 G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~~ 177 (377)
T 2r14_A 98 GGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQAAQRAKR 177 (377)
T ss_dssp TCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 78899999741 23 57888887654
Q ss_pred CCCCeEeeccCC---------CceEEEeccccceecc
Q psy18231 94 PHCNGVDLNCGC---------PQRWAIKEGYGCALLS 121 (540)
Q Consensus 94 ~~~~~id~~~gc---------~~~~~~~~g~g~~l~~ 121 (540)
.+.|.|++|.+| |........+|..+..
T Consensus 178 aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslen 214 (377)
T 2r14_A 178 AGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIEN 214 (377)
T ss_dssp HTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHH
T ss_pred cCCCEEEEcCcccchHHhccCCccccCCCccCcchhh
Confidence 499999999998 5544444455555544
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.33 E-value=0.001 Score=61.17 Aligned_cols=227 Identities=10% Similarity=0.032 Sum_probs=132.4
Q ss_pred EEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeE-EEeeCCCeEEEEEcCC----CceeEeccccCCcee
Q psy18231 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI-ASGASDKSVILWEVTT----GQPVRRWREHASKVT 252 (540)
Q Consensus 178 ~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~~----~~~~~~~~~h~~~v~ 252 (540)
+|+.+. ...|+..|+.+.+....+. .......++|++++..| ++-..++.|..+++.. ......+...-....
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344443 3578899988776655554 34567899999866555 4555568999999875 222222322234567
Q ss_pred EEEECCCC-CEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecc
Q psy18231 253 CVKFNEDS-SVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKY 331 (540)
Q Consensus 253 ~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (540)
.+++.+.+ ++.++-...+.|.+.++.......+
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~---------------------------------------------- 114 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL---------------------------------------------- 114 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE----------------------------------------------
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEE----------------------------------------------
Confidence 88988644 4445556677888888754321000
Q ss_pred cccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeC-C-CeEEEEeCCC
Q psy18231 332 LNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASL-D-CRIRRYDIRT 407 (540)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~-d-g~i~iwd~~~ 407 (540)
..........++++| ..++.+.. . +.|...+++.
T Consensus 115 ------------------------------------------~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 115 ------------------------------------------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp ------------------------------------------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred ------------------------------------------EECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 000112346777776 44444443 2 6788888764
Q ss_pred CceEEeee---CCceEEEEEecCCcEEEee-cCCCeEEEEeccccchhhhhcc-C--cCCcceEEEEecCCCCeEEEeeC
Q psy18231 408 GNLVTDYV---GEPIVDACFTRDCQCILTC-STDECLRLFDKATGELLEEYKG-H--KSGDFRIECCLDSKDSQIFCGSS 480 (540)
Q Consensus 408 ~~~~~~~~---~~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~-~--~~~v~~~~~~~s~~~~~l~s~s~ 480 (540)
. ....+. ......++++|++..|+.+ +..+.|..+|+.. .....+.. . ......+ ++. .+..+++-..
T Consensus 153 ~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~gi--av~-~~~ly~~d~~ 227 (316)
T 1ijq_A 153 V-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSL--AVF-EDKVFWTDII 227 (316)
T ss_dssp C-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEE--EEE-TTEEEEEETT
T ss_pred C-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEE--EEE-CCEEEEEECC
Confidence 3 333222 2467899999876655544 4567999999864 22222211 1 1112334 453 3555556667
Q ss_pred CCcEEEEEecCCcceeEEE
Q psy18231 481 DGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 481 dg~i~iwd~~~~~~~~~~~ 499 (540)
.+.|..++..+++.+..+.
T Consensus 228 ~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 228 NEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TTEEEEEETTTCCCCEEEE
T ss_pred CCeEEEEeCCCCcceEEEe
Confidence 7889999987887766664
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.31 E-value=4.2e-05 Score=79.65 Aligned_cols=70 Identities=10% Similarity=0.106 Sum_probs=47.3
Q ss_pred ceeEEEEe-eCCCeEEEeeC-C----CeEEEEEcCCC-ceeEe-ccccCCceeEEEECCCCCEEEEecCCC-----cEEE
Q psy18231 208 EVNDATAA-CDSSQIASGAS-D----KSVILWEVTTG-QPVRR-WREHASKVTCVKFNEDSSVVISGSQDN-----TVMM 274 (540)
Q Consensus 208 ~v~~l~~s-p~~~~l~s~s~-d----g~i~iwd~~~~-~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~i 274 (540)
.+...+|| |||++||-+.. + .+|+++|+.++ +.+.. +. .....+.|+||++.|+....|. .|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99998885433 2 35999999998 63221 11 1235688999998887776542 4555
Q ss_pred EEecCC
Q psy18231 275 WDVKSR 280 (540)
Q Consensus 275 wd~~~~ 280 (540)
+++.++
T Consensus 252 ~~lgt~ 257 (751)
T 2xe4_A 252 HVMGKL 257 (751)
T ss_dssp EETTSC
T ss_pred EECCCC
Confidence 665443
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.30 E-value=0.0015 Score=62.26 Aligned_cols=231 Identities=10% Similarity=0.042 Sum_probs=135.6
Q ss_pred EEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEE-EeeCCCeEEEEEcCCC----ceeEeccccCCcee
Q psy18231 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA-SGASDKSVILWEVTTG----QPVRRWREHASKVT 252 (540)
Q Consensus 178 ~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~ 252 (540)
+|+.+. ...|+..++........+. ....+..++|++.+..|. +-...+.|..+++... .....+........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 454444 4788899987665544443 456788999998655555 4455688999988652 22233333445678
Q ss_pred EEEECC-CCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecc
Q psy18231 253 CVKFNE-DSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKY 331 (540)
Q Consensus 253 ~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (540)
.+++.+ .+++.++-...+.|.+.+++......
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~----------------------------------------------- 195 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT----------------------------------------------- 195 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEE-----------------------------------------------
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEE-----------------------------------------------
Confidence 899987 45555555566778877765433100
Q ss_pred cccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeC--CCeEEEEeCCC
Q psy18231 332 LNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASL--DCRIRRYDIRT 407 (540)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~--dg~i~iwd~~~ 407 (540)
.....-.....|+++| ..|+.+.. .+.|...+++.
T Consensus 196 -----------------------------------------l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 196 -----------------------------------------LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp -----------------------------------------EEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred -----------------------------------------EEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 0001112346777776 44544432 36788888875
Q ss_pred CceEEeeeC--CceEEEEEecCCcEEEee-cCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcE
Q psy18231 408 GNLVTDYVG--EPIVDACFTRDCQCILTC-STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 484 (540)
Q Consensus 408 ~~~~~~~~~--~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i 484 (540)
......... .....++++|++..|+.+ ...+.|..+|+...............-....+++. .+..+++-...+.|
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V 313 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 313 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSE
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeE
Confidence 443332222 567899999876666555 45678999998643322222211111112222442 33455566677889
Q ss_pred EEEEecCCcceeEEE
Q psy18231 485 YKWQLVDSSQISTLI 499 (540)
Q Consensus 485 ~iwd~~~~~~~~~~~ 499 (540)
..+|..+++.+..+.
T Consensus 314 ~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 314 FSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEESSSCCCCEEEE
T ss_pred EEEEcCCCCceEEEe
Confidence 999988888777776
No 278
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.29 E-value=9.2e-07 Score=82.24 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=70.8
Q ss_pred cceecCCceEEeccCCC---------CCHHHHHHHHHcCCCEEEeeeeecccccccc--------hhh---ccccc--cC
Q psy18231 10 RSTLLKNLKHCDSTLWT---------SKLNFRQLVRSHNVDLCFTPMIIADSFIKSS--------KAR---NNEFS--TS 67 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~---------~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~--~~ 67 (540)
+.+.+++|++||||++. |+..+|..+++.|+++++||++.....-+.. ... .+.+. .+
T Consensus 12 g~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~vh 91 (364)
T 1vyr_A 12 GAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITAGVH 91 (364)
T ss_dssp TTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHHHHHH
T ss_pred CCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence 56889999999999986 7889999999999999999998755322211 111 22221 35
Q ss_pred CCCCCEEEEEec------------------------------------------CCh------------hHHHHHHHH-h
Q psy18231 68 PEDTPLVVQFAS------------------------------------------NNH------------DDFVRATQY-V 92 (540)
Q Consensus 68 ~~~~~~~~q~~~------------------------------------------~~~------------~~~~~~~~~-~ 92 (540)
..+.++++|++. ..| ++++++|+. .
T Consensus 92 ~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~ 171 (364)
T 1vyr_A 92 AEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVANAR 171 (364)
T ss_dssp HTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 667889999972 123 478888876 4
Q ss_pred cCCCCeEeeccCC
Q psy18231 93 APHCNGVDLNCGC 105 (540)
Q Consensus 93 ~~~~~~id~~~gc 105 (540)
+.+.|.|++|.+|
T Consensus 172 ~aGfDgVeih~a~ 184 (364)
T 1vyr_A 172 EAGFDLVELHSAH 184 (364)
T ss_dssp HTTCSEEEEEECT
T ss_pred HcCCCEEEEcCcc
Confidence 4599999999997
No 279
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.27 E-value=0.0047 Score=62.30 Aligned_cols=383 Identities=11% Similarity=-0.001 Sum_probs=186.0
Q ss_pred hhhhhcccccceeeeeccccccee-e--eeecCeEEEEeCCCCCEEEEeeC--CCcEEEEcCCCCeeEEEeecCCcceeE
Q psy18231 137 TRILYELPKEWSIRVYRPLTVNRE-L--FVLSGLMHTRFPVDGSYCLTCGS--DKKIKLWNPYRNLLLKTYGGHAHEVND 211 (540)
Q Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~~~-~--~h~~~v~~v~~spdg~~lat~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~ 211 (540)
..+++.-.....|.+.+.....+. + ........|++.|.+.+|..... .+.|...++............-.....
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~G 175 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 175 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEE
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcE
Confidence 344444455556666665443221 1 23345778999997666655442 456666665433222222233455788
Q ss_pred EEEeeCCCeEEEe-eCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhh
Q psy18231 212 ATAACDSSQIASG-ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290 (540)
Q Consensus 212 l~~sp~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 290 (540)
+++.+++..|..+ ...+.|...|+..........+.......+++.++ ...++-...+.|...|..+++........
T Consensus 176 lald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~- 253 (619)
T 3s94_A 176 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSD- 253 (619)
T ss_dssp EEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSC-
T ss_pred EEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecC-
Confidence 9999876665555 45678888888543322222222233456777655 45555556778988888776532111000
Q ss_pred hHhhhhcCCceeEEEEeeccccc---c---cccCceeeE-E-------Eeeeecccccce-eee-eeccceeEEEeeccc
Q psy18231 291 NEALKEARDSITSVHSLVKSTKN---H---LSNGLLTKL-V-------FAFRCKYLNGLL-SGV-LMSTQHLMVLLDFLG 354 (540)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~-~-------~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 354 (540)
......+......... . ...+..... . +...|....... ... .......+.++...+
T Consensus 254 -------~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~ 326 (619)
T 3s94_A 254 -------IFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRT 326 (619)
T ss_dssp -------CCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESS
T ss_pred -------CCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEccc
Confidence 0111122211110000 0 000000000 0 111111100000 000 000111222222222
Q ss_pred ceecccccccccccchhhhhhcccccEEEEEecC--CeeEe-eeCCCeEEEEeCCCCceEEeeeC--CceEEEEEec-CC
Q psy18231 355 STQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILT-ASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTR-DC 428 (540)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~-~~~dg~i~iwd~~~~~~~~~~~~--~~i~~~~~sp-~~ 428 (540)
......+....... ....+ ..-..+.++++++ +.|.. -...+.|+.++++.......+.. .....+++.+ .+
T Consensus 327 ~i~~i~l~~~~~~~-~~~~~-~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~ 404 (619)
T 3s94_A 327 DLRRISLDTPDFTD-IVLQL-EDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVAR 404 (619)
T ss_dssp CEEEEESSSTTCCC-EECCC-SCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred ceEEEecCCCccce-eEEec-cccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccC
Confidence 11111111100000 00001 1123467888886 44444 44578899999876443333322 4677899987 45
Q ss_pred cEEEeecCCCeEEEEeccccchhhhhc-cCcCCcceEEEEecCCCCeEEEeeC--CCcEEEEEecCCcceeEEEecccce
Q psy18231 429 QCILTCSTDECLRLFDKATGELLEEYK-GHKSGDFRIECCLDSKDSQIFCGSS--DGKIYKWQLVDSSQISTLIHSVGKA 505 (540)
Q Consensus 429 ~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~ 505 (540)
++.++-+..+.|.+.++.... ...+. ..-.....+ ++.|...+|+.... .+.|...++ +|+....+.. ..-.
T Consensus 405 ~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~i--avdp~~G~ly~tD~g~~~~I~r~~~-dG~~~~~l~~-~~l~ 479 (619)
T 3s94_A 405 NLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAI--VLDPMVGYMYWTDWGEIPKIERAAL-DGSDRVVLVN-TSLG 479 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEE--EEETTTTEEEEEECSSSCEEEEEET-TSCSCEEEEC-SSCS
T ss_pred cEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeE--EEEcCCCcEEEecCCCCCEEEEEcc-CCCccEEEEe-CCCC
Confidence 566666678899999886432 22222 111223344 78887555555543 355666664 4554444431 3345
Q ss_pred eeeEEEEcCCCcEEEeec--CCeeEEEEcccc
Q psy18231 506 VVNSLCSHPTRKHIMSAC--GNNVKLWTAEED 535 (540)
Q Consensus 506 ~v~~l~~s~d~~~l~s~~--d~~i~iw~~~~~ 535 (540)
..+.|++++++..|..+. .+.|...+++..
T Consensus 480 ~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~ 511 (619)
T 3s94_A 480 WPNGLALDYDEGKIYWGDAKTDKIEVMNTDGT 511 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred CCeeeEEcccCCEEEEEECCCCEEEEEecCCC
Confidence 688999999877777776 567888877543
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=0.00047 Score=66.35 Aligned_cols=235 Identities=9% Similarity=0.015 Sum_probs=131.4
Q ss_pred ceeEEEEee-CCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCC-C---cEEEEEecCCCC
Q psy18231 208 EVNDATAAC-DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD-N---TVMMWDVKSRSH 282 (540)
Q Consensus 208 ~v~~l~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g---~i~iwd~~~~~~ 282 (540)
....++++| ++..|..+...+.|+.+|+..+...... ........++|++++++|+.+... + ...+|-...+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457889997 4555666655588999998776544333 345668899999999966665542 2 112222222210
Q ss_pred CCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceeccccc
Q psy18231 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVT 362 (540)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (540)
....
T Consensus 217 ~~~~---------------------------------------------------------------------------- 220 (430)
T 3tc9_A 217 KVIT---------------------------------------------------------------------------- 220 (430)
T ss_dssp CSEE----------------------------------------------------------------------------
T ss_pred eeee----------------------------------------------------------------------------
Confidence 0000
Q ss_pred ccccccchhhhhhcccccEEEEEecC--Ce-eEeeeCCCeEEEEeCCCCceEEeee--C-CceEEEEEecCCcE-EEeec
Q psy18231 363 PISIHNSCFQALKEARDSITSVHVSD--HE-ILTASLDCRIRRYDIRTGNLVTDYV--G-EPIVDACFTRDCQC-ILTCS 435 (540)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~v~~l~~~~--~~-l~~~~~dg~i~iwd~~~~~~~~~~~--~-~~i~~~~~sp~~~~-l~~~~ 435 (540)
.+. .......++++| .. +++-..++.|..++...+....... . .....++|+|+|++ +++-.
T Consensus 221 ----------~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 221 ----------ELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp ----------EEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred ----------eec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 000 011234556666 33 4444567889999998765422222 2 34778999999995 45555
Q ss_pred CCCeEEEEeccc--cch--hhhhccC------c---------CCcc-eEEEEe--------cCCCCeEEEeeCCCcEEEE
Q psy18231 436 TDECLRLFDKAT--GEL--LEEYKGH------K---------SGDF-RIECCL--------DSKDSQIFCGSSDGKIYKW 487 (540)
Q Consensus 436 ~dg~i~i~d~~~--~~~--~~~~~~~------~---------~~v~-~~~~~~--------s~~~~~l~s~s~dg~i~iw 487 (540)
..+.|..++... ++. +..+.+. . ..-. .+ +. .++|.+.++=...+.|+.+
T Consensus 290 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv--~v~~~~y~~~D~~g~lyvaD~~n~~I~~i 367 (430)
T 3tc9_A 290 NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGT--FVKNPAYKGSSDEYDFYFCDRENHCIRIL 367 (430)
T ss_dssp TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEE--EEECGGGTTSSCCEEEEEEEGGGTEEEEE
T ss_pred CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceE--EEccccccccCCCCeEEEEECCCcEEEEE
Confidence 678899987652 211 1111111 0 0001 12 23 2345555555566788888
Q ss_pred EecCCcceeEEEec-----c----------cceeeeEEEEcCC-CcEEEeec-CCeeEEEEcc
Q psy18231 488 QLVDSSQISTLIHS-----V----------GKAVVNSLCSHPT-RKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 488 d~~~~~~~~~~~~~-----~----------~~~~v~~l~~s~d-~~~l~s~~-d~~i~iw~~~ 533 (540)
+ .+++........ + .-.....++++|+ +.++++-. .+.|+..+++
T Consensus 368 ~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 368 T-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp C-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred C-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 8 456433333210 0 0124789999995 55555544 7889888875
No 281
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.26 E-value=9.6e-07 Score=81.62 Aligned_cols=95 Identities=11% Similarity=0.105 Sum_probs=65.1
Q ss_pred cceecCCceEEeccCCCCC-----HH-------HHHHHHHcCCCEEEeeeeecccccccchh--------h---ccccc-
Q psy18231 10 RSTLLKNLKHCDSTLWTSK-----LN-------FRQLVRSHNVDLCFTPMIIADSFIKSSKA--------R---NNEFS- 65 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~-----~~-------~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~- 65 (540)
+++.+++|+++|||++.+. .| ||+.+ +.|+++++|||+.....-+..+. . .+.+.
T Consensus 12 g~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA-~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~ 90 (338)
T 1z41_A 12 KDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRA-IGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTE 90 (338)
T ss_dssp TTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHH-HTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHH
T ss_pred CCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHH-cCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHH
Confidence 5788999999999999864 45 44443 24899999999866432221111 1 11111
Q ss_pred -cCCCCCCEEEEEecC-----------------------Ch------------hHHHHHHHHh-cCCCCeEeeccCC
Q psy18231 66 -TSPEDTPLVVQFASN-----------------------NH------------DDFVRATQYV-APHCNGVDLNCGC 105 (540)
Q Consensus 66 -~~~~~~~~~~q~~~~-----------------------~~------------~~~~~~~~~~-~~~~~~id~~~gc 105 (540)
.++.+.++++|++.. .| ++++++|+.. +.+.|.|++|++|
T Consensus 91 ~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~ 167 (338)
T 1z41_A 91 QVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAH 167 (338)
T ss_dssp HHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECT
T ss_pred HHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecccc
Confidence 246678999999853 33 4677888764 4599999999997
No 282
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.24 E-value=0.0011 Score=61.88 Aligned_cols=203 Identities=6% Similarity=-0.060 Sum_probs=124.3
Q ss_pred ecCeEEEEeCCCCCEEE-EeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCC-CeEEEeeCCCeEEEEEcCCCcee
Q psy18231 164 LSGLMHTRFPVDGSYCL-TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS-SQIASGASDKSVILWEVTTGQPV 241 (540)
Q Consensus 164 ~~~v~~v~~spdg~~la-t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~ 241 (540)
......++|++....|. +-...+.|..+++........+.........+++.+.+ +++++-...+.|.+.++......
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 34578999998666665 44457889999987665444333333456789998754 44556666789999998654433
Q ss_pred EeccccCCceeEEEECCCCCEEEEec-CC-CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCc
Q psy18231 242 RRWREHASKVTCVKFNEDSSVVISGS-QD-NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319 (540)
Q Consensus 242 ~~~~~h~~~v~~~~~~~~~~~l~s~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (540)
..+...-.....++++|.+..|+... .. +.|...++.......
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~----------------------------------- 196 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI----------------------------------- 196 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE-----------------------------------
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE-----------------------------------
Confidence 33333445678999998655554443 33 567766665432100
Q ss_pred eeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Cee-EeeeC
Q psy18231 320 LTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI-LTASL 396 (540)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l-~~~~~ 396 (540)
.....-.....+++++ +.| ++-+.
T Consensus 197 -----------------------------------------------------~~~~~~~~PnGla~d~~~~~lY~aD~~ 223 (349)
T 3v64_C 197 -----------------------------------------------------IADTHLFWPNGLTIDYAGRRMYWVDAK 223 (349)
T ss_dssp -----------------------------------------------------SCCSSCSCEEEEEEETTTTEEEEEETT
T ss_pred -----------------------------------------------------EEECCCCCcceEEEeCCCCEEEEEECC
Confidence 0001122356788875 444 44455
Q ss_pred CCeEEEEeCCCCceEEeee--CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhc
Q psy18231 397 DCRIRRYDIRTGNLVTDYV--GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK 455 (540)
Q Consensus 397 dg~i~iwd~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 455 (540)
.+.|..+|++.......+. ......+++ .++.++++-...+.|..+|..+++.+..+.
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 224 HHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 6789999987543322222 235567777 456666666678889888876776655554
No 283
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.23 E-value=0.00075 Score=63.98 Aligned_cols=204 Identities=6% Similarity=-0.061 Sum_probs=124.8
Q ss_pred ecCeEEEEeCCCCCEEE-EeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCC-eEEEeeCCCeEEEEEcCCCcee
Q psy18231 164 LSGLMHTRFPVDGSYCL-TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS-QIASGASDKSVILWEVTTGQPV 241 (540)
Q Consensus 164 ~~~v~~v~~spdg~~la-t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~ 241 (540)
......++|++.+..|+ +-...+.|..+++........+.........+++.+.+. ++++-...+.|.+.++......
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 45688999998665555 445578899999876654443433334567789987544 4555566788998888654433
Q ss_pred EeccccCCceeEEEECCCCCEEEEecC-C-CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCc
Q psy18231 242 RRWREHASKVTCVKFNEDSSVVISGSQ-D-NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319 (540)
Q Consensus 242 ~~~~~h~~~v~~~~~~~~~~~l~s~~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (540)
..+.........+++.|.+..|+.+.. . +.|...++.......
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~----------------------------------- 239 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI----------------------------------- 239 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE-----------------------------------
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE-----------------------------------
Confidence 333334456789999986665554433 3 566666654332100
Q ss_pred eeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Cee-EeeeC
Q psy18231 320 LTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI-LTASL 396 (540)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l-~~~~~ 396 (540)
.....-.....|++++ +.| ++-+.
T Consensus 240 -----------------------------------------------------~~~~~~~~PnGlavd~~~~~lY~aD~~ 266 (386)
T 3v65_B 240 -----------------------------------------------------IADTHLFWPNGLTIDYAGRRMYWVDAK 266 (386)
T ss_dssp -----------------------------------------------------EECSSCSCEEEEEEEGGGTEEEEEETT
T ss_pred -----------------------------------------------------EEECCCCCeeeEEEeCCCCEEEEEECC
Confidence 0000112346778875 444 44456
Q ss_pred CCeEEEEeCCCCceEEeee--CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhcc
Q psy18231 397 DCRIRRYDIRTGNLVTDYV--GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 456 (540)
Q Consensus 397 dg~i~iwd~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 456 (540)
.+.|..+|++.......+. ......+++ ..+.++++-...+.|..+|..+++.+..+..
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 267 HHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp TTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 6789999987543332232 235667777 4556667777788899998777776655543
No 284
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.18 E-value=0.0014 Score=57.36 Aligned_cols=80 Identities=14% Similarity=0.247 Sum_probs=59.4
Q ss_pred EeecCCcceeEEEEeeCCCeEE-EeeCCCeEEEEEcCCCceeEeccc-cCCceeEEEECCCCCEEEEecCCCcEEEEEec
Q psy18231 201 TYGGHAHEVNDATAACDSSQIA-SGASDKSVILWEVTTGQPVRRWRE-HASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278 (540)
Q Consensus 201 ~~~~h~~~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 278 (540)
.+.+-...+..++|+|++..|+ +...++.|...|.. ++.++.+.- -......+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4555567899999999766555 56778899999987 887777632 23567889999888776776667788888876
Q ss_pred CCC
Q psy18231 279 SRS 281 (540)
Q Consensus 279 ~~~ 281 (540)
...
T Consensus 100 ~~~ 102 (255)
T 3qqz_A 100 PNS 102 (255)
T ss_dssp TTC
T ss_pred CCC
Confidence 543
No 285
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.18 E-value=1.5e-06 Score=80.78 Aligned_cols=96 Identities=10% Similarity=0.059 Sum_probs=70.5
Q ss_pred cceecCCceEEeccCCCC---------CHHHHHHHHHcCCCEEEeeeeecccccccc--------hhh---ccccc--cC
Q psy18231 10 RSTLLKNLKHCDSTLWTS---------KLNFRQLVRSHNVDLCFTPMIIADSFIKSS--------KAR---NNEFS--TS 67 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~---------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~--~~ 67 (540)
+++.|++|+++|||++.. +..+|..+++.++++++||++.....-+.. ... .+.+. .+
T Consensus 12 g~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~vh 91 (365)
T 2gou_A 12 GALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVTEAVH 91 (365)
T ss_dssp TTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHHHHH
T ss_pred CCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHHHHHHHHH
Confidence 578899999999999984 789999999999999999998754322211 111 22221 24
Q ss_pred CCCCCEEEEEec------------------------------------------CCh------------hHHHHHHHHh-
Q psy18231 68 PEDTPLVVQFAS------------------------------------------NNH------------DDFVRATQYV- 92 (540)
Q Consensus 68 ~~~~~~~~q~~~------------------------------------------~~~------------~~~~~~~~~~- 92 (540)
..+.++++|++. ..| ++++++|+..
T Consensus 92 ~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~ 171 (365)
T 2gou_A 92 AKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAALNAM 171 (365)
T ss_dssp HHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 667789999973 123 5788888764
Q ss_pred cCCCCeEeeccCC
Q psy18231 93 APHCNGVDLNCGC 105 (540)
Q Consensus 93 ~~~~~~id~~~gc 105 (540)
+.+.|.|++|++|
T Consensus 172 ~aGfDgVeih~a~ 184 (365)
T 2gou_A 172 EAGFDGIELHAAN 184 (365)
T ss_dssp HTTCSEEEEECCT
T ss_pred HcCCCEEEEeccc
Confidence 4599999999998
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.17 E-value=0.00095 Score=64.22 Aligned_cols=148 Identities=16% Similarity=0.177 Sum_probs=87.3
Q ss_pred EEEEecC--CeeE-eeeCCCeEEEEeCCCCceEEee-e-C--CceEEEEEecCCcEE-EeecCCCeEEEEecc--ccchh
Q psy18231 382 TSVHVSD--HEIL-TASLDCRIRRYDIRTGNLVTDY-V-G--EPIVDACFTRDCQCI-LTCSTDECLRLFDKA--TGELL 451 (540)
Q Consensus 382 ~~l~~~~--~~l~-~~~~dg~i~iwd~~~~~~~~~~-~-~--~~i~~~~~sp~~~~l-~~~~~dg~i~i~d~~--~~~~~ 451 (540)
..+++++ ..|. +-..++.|+.+|..++.....+ . + ..-..++|+|++++| ++-...+.|+.++.. ++...
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~ 310 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLA 310 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBC
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccC
Confidence 3455655 3344 4446778999999877653322 1 1 223469999999854 445567889998764 23211
Q ss_pred --hhhccC---------------cCCcceEEEEe---------cCCCCeEEEeeCCCcEEEEEecCCcceeEEEecc---
Q psy18231 452 --EEYKGH---------------KSGDFRIECCL---------DSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV--- 502 (540)
Q Consensus 452 --~~~~~~---------------~~~v~~~~~~~---------s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--- 502 (540)
..+.+. -..-..+ ++ .++|.+.++-...+.|+.++ .++.. .++...+
T Consensus 311 ~~~~~ag~~g~~g~~dg~~~~a~~~~P~gi--av~~n~~y~~dd~~g~lyvaD~~n~~I~~~~-~~G~v-~t~~G~g~~~ 386 (433)
T 4hw6_A 311 VPYIVCGQHSSPGWVDGMGTGARLWGPNQG--IFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT-PEGRV-TTYAGRGNSR 386 (433)
T ss_dssp CCEEEEECTTCCCCBCEEGGGSBCSSEEEE--EEEECGGGTTSSCCEEEEEEETTTTEEEEEC-TTSEE-EEEECCCTTC
T ss_pred cEEEEEecCCCCccCCCcccceEEcCCccE--EEEccccccccCCCCcEEEEECCCCEEEEEC-CCCCE-EEEEeCCCCC
Confidence 111111 0111223 67 66777677666778899988 35533 3332100
Q ss_pred -------------cceeeeEEEEc-CCCcEEEeec-CCeeEEEEcc
Q psy18231 503 -------------GKAVVNSLCSH-PTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 503 -------------~~~~v~~l~~s-~d~~~l~s~~-d~~i~iw~~~ 533 (540)
.-.....|+++ ++|.++++=. .+.|+..+++
T Consensus 387 ~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 387 EWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 01237789999 6666665555 7899988875
No 287
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.16 E-value=0.0028 Score=58.17 Aligned_cols=203 Identities=11% Similarity=-0.003 Sum_probs=120.5
Q ss_pred ecCeEEEEeCCCCCEEE-EeeCCCcEEEEcCCC----CeeEEEeecCCcceeEEEEeeCCC-eEEEeeCCCeEEEEEcCC
Q psy18231 164 LSGLMHTRFPVDGSYCL-TCGSDKKIKLWNPYR----NLLLKTYGGHAHEVNDATAACDSS-QIASGASDKSVILWEVTT 237 (540)
Q Consensus 164 ~~~v~~v~~spdg~~la-t~~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~ 237 (540)
......++|++++..|+ +-...+.|..+++.. ......+...-.....+++.+.+. +.++-..++.|.+.++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 45678999998766555 445568999999875 222222332234568899987544 455556778999999865
Q ss_pred CceeEeccccCCceeEEEECCCCCEEEEecCC--CcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccc
Q psy18231 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQD--NTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHL 315 (540)
Q Consensus 238 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (540)
......+.........++++|.+..|+.+... +.|...++.......+
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~------------------------------ 158 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL------------------------------ 158 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE------------------------------
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEE------------------------------
Confidence 43333333334567899999866555544432 5666666543220000
Q ss_pred ccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeE-
Q psy18231 316 SNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEIL- 392 (540)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~- 392 (540)
....-.....+++++ +.|.
T Consensus 159 ----------------------------------------------------------~~~~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 159 ----------------------------------------------------------VTENIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp ----------------------------------------------------------ECSSCSCEEEEEEETTTTEEEE
T ss_pred ----------------------------------------------------------EECCCCCceEEEEeccCCEEEE
Confidence 000112456777875 4444
Q ss_pred eeeCCCeEEEEeCCCCceEEeeeC----CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhc
Q psy18231 393 TASLDCRIRRYDIRTGNLVTDYVG----EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK 455 (540)
Q Consensus 393 ~~~~dg~i~iwd~~~~~~~~~~~~----~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 455 (540)
+-+..+.|..+|++.......... .....+++. .+.++++-...+.|..+|..+++.+..+.
T Consensus 181 ~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 445567899999874332222221 345677775 46666677778899999987776655554
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.16 E-value=0.0015 Score=59.93 Aligned_cols=222 Identities=9% Similarity=0.002 Sum_probs=129.0
Q ss_pred CCcEEEEcCCCCe--eEEEeecCCcceeEEEEeeCCC-eEEEeeCCCeEEEEEcCCCcee-EeccccCCceeEEEECC-C
Q psy18231 185 DKKIKLWNPYRNL--LLKTYGGHAHEVNDATAACDSS-QIASGASDKSVILWEVTTGQPV-RRWREHASKVTCVKFNE-D 259 (540)
Q Consensus 185 dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~~-~ 259 (540)
...|+..++.... ....+. .......++|.+.+. ++.+-...+.|..+++..+... ..+...-.....+++.+ .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 4678888887653 222222 234567899998544 4555566788999998765321 22222234567888887 4
Q ss_pred CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeee
Q psy18231 260 SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGV 339 (540)
Q Consensus 260 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (540)
+++.++-...+.|.++++.......+
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l------------------------------------------------------ 116 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVL------------------------------------------------------ 116 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEE------------------------------------------------------
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEE------------------------------------------------------
Confidence 45555555667888888765331000
Q ss_pred eeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeee--CCCeEEEEeCCCCceEEeee
Q psy18231 340 LMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTAS--LDCRIRRYDIRTGNLVTDYV 415 (540)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~--~dg~i~iwd~~~~~~~~~~~ 415 (540)
..........++++| ..++.+. ..+.|...+++.........
T Consensus 117 ----------------------------------~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 162 (318)
T 3sov_A 117 ----------------------------------FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 162 (318)
T ss_dssp ----------------------------------ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred ----------------------------------EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence 001112345677776 4555444 25778888876433222222
Q ss_pred C--CceEEEEEecCCcEEEe-ecCCCeEEEEeccccchhhhh-ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecC
Q psy18231 416 G--EPIVDACFTRDCQCILT-CSTDECLRLFDKATGELLEEY-KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491 (540)
Q Consensus 416 ~--~~i~~~~~sp~~~~l~~-~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~ 491 (540)
. .....++++|++..|+. -+..+.|..+|+.... ...+ .........+ ++. .+..+.+-...+.|..++..+
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~gl--av~-~~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFAL--TLF-EDILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSCCSCEEEE--EEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecCCCCCceEE--EEe-CCEEEEEecCCCeEEEEECCC
Confidence 2 45689999996555554 4557889999986432 2222 2122222334 443 334555656678899999878
Q ss_pred CcceeEEE
Q psy18231 492 SSQISTLI 499 (540)
Q Consensus 492 ~~~~~~~~ 499 (540)
++....+.
T Consensus 239 G~~~~~i~ 246 (318)
T 3sov_A 239 GEGLREIH 246 (318)
T ss_dssp CCSCEEEE
T ss_pred CCceEEEe
Confidence 88766665
No 289
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=98.13 E-value=3.6e-06 Score=78.26 Aligned_cols=89 Identities=8% Similarity=-0.004 Sum_probs=67.9
Q ss_pred ceecCCceEEeccC--CCCC----HHHHHHHHHcCCCEEEeeeeecccccccchhhccccccCCCCCCEEEEEec-CChh
Q psy18231 11 STLLKNLKHCDSTL--WTSK----LNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFAS-NNHD 83 (540)
Q Consensus 11 ~~~~~~~~~~ap~~--~~~~----~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~~ 83 (540)
+..+++++++|||+ |+++ ++++++|+++|+.+++++|.+ ..+ +. +.....+.|+.+|+++ .+++
T Consensus 76 G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s-~~l-e~-------v~~~~~~~~~~~QLy~~~d~~ 146 (368)
T 2nli_A 76 GHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSG-ATF-EE-------ISEGLNGGPRWFQIYMAKDDQ 146 (368)
T ss_dssp TEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCS-SCH-HH-------HHHHHTTCCEEEEECCBSSHH
T ss_pred CEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHh-HHH-HH-------HHHhCCCCCEEEEEeccCCHH
Confidence 45568899999999 8884 899999999999999999975 222 11 1111136789999988 7788
Q ss_pred HHHHHHHHhcC-CCCeEeeccCCCce
Q psy18231 84 DFVRATQYVAP-HCNGVDLNCGCPQR 108 (540)
Q Consensus 84 ~~~~~~~~~~~-~~~~id~~~gc~~~ 108 (540)
.+.+.++..++ +++.++++++||..
T Consensus 147 ~~~~~~~ra~~aG~~ai~it~d~p~~ 172 (368)
T 2nli_A 147 QNRDILDEAKSDGATAIILTADSTVS 172 (368)
T ss_dssp HHHHHHHHHHHTTCSCEEEESBCC--
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCcc
Confidence 88777776554 88999999999974
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.11 E-value=0.0028 Score=60.30 Aligned_cols=229 Identities=10% Similarity=-0.024 Sum_probs=134.4
Q ss_pred ceeeeecccccc--eeeeeecCeEEEEeCCCCCEEEEe-eCCCcEEEEcCCCC----eeEEEeecCCcceeEEEEee-CC
Q psy18231 147 WSIRVYRPLTVN--RELFVLSGLMHTRFPVDGSYCLTC-GSDKKIKLWNPYRN----LLLKTYGGHAHEVNDATAAC-DS 218 (540)
Q Consensus 147 ~~i~~~~~~~~~--~~~~h~~~v~~v~~spdg~~lat~-~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~sp-~~ 218 (540)
..|+..+..... ........+..++|++.+..|..+ ...+.|..+++... .....+.........+++.+ .+
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~ 171 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 171 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTT
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCC
Confidence 445555544322 223345678899999866666544 45678888887652 22333333445678899988 45
Q ss_pred CeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecC--CCcEEEEEecCCCCCCcchhhhhHhhhh
Q psy18231 219 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ--DNTVMMWDVKSRSHHPIQVRCLNEALKE 296 (540)
Q Consensus 219 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 296 (540)
++.++-...+.|.+.+++.......+.........+++.|.+.+|+.... .+.|...++.......+
T Consensus 172 ~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~----------- 240 (400)
T 3p5b_L 172 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL----------- 240 (400)
T ss_dssp EEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE-----------
T ss_pred ceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE-----------
Confidence 55556666789999998655444444434456789999986655554432 35677666654321000
Q ss_pred cCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhc
Q psy18231 297 ARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKE 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (540)
...
T Consensus 241 -----------------------------------------------------------------------------~~~ 243 (400)
T 3p5b_L 241 -----------------------------------------------------------------------------VTE 243 (400)
T ss_dssp -----------------------------------------------------------------------------ECS
T ss_pred -----------------------------------------------------------------------------EEC
Confidence 001
Q ss_pred ccccEEEEEecC--CeeEee-eCCCeEEEEeCCCCceEEeeeC----CceEEEEEecCCcEEEeecCCCeEEEEeccccc
Q psy18231 377 ARDSITSVHVSD--HEILTA-SLDCRIRRYDIRTGNLVTDYVG----EPIVDACFTRDCQCILTCSTDECLRLFDKATGE 449 (540)
Q Consensus 377 ~~~~v~~l~~~~--~~l~~~-~~dg~i~iwd~~~~~~~~~~~~----~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~ 449 (540)
.-.....|++++ +.|..+ +..+.|..+|++.......... .....+++. .+.++.+-...+.|..+|..+++
T Consensus 244 ~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCC
Confidence 113456778875 444444 4567899999875443332222 334566663 44566666677889999988887
Q ss_pred hhhhhccCcCCcceE
Q psy18231 450 LLEEYKGHKSGDFRI 464 (540)
Q Consensus 450 ~~~~~~~~~~~v~~~ 464 (540)
.+..+.........+
T Consensus 323 ~~~~i~~~~~~p~~i 337 (400)
T 3p5b_L 323 DVNLLAENLLSPEDM 337 (400)
T ss_dssp CCEEEECSCSCEEEE
T ss_pred ceEEEecCCCCCceE
Confidence 766665433333444
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.11 E-value=0.00083 Score=64.64 Aligned_cols=115 Identities=6% Similarity=0.071 Sum_probs=70.2
Q ss_pred cCeEEEEeCCC--CCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCC---Ce-EEEEEcCCC
Q psy18231 165 SGLMHTRFPVD--GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD---KS-VILWEVTTG 238 (540)
Q Consensus 165 ~~v~~v~~spd--g~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d---g~-i~iwd~~~~ 238 (540)
.....++|+|+ +..|..+...+.|+.+|+.++...... ........++++++|+++++.... .. +...+...+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 45678999995 445555544489999998877765443 345568899999999955554321 12 333333222
Q ss_pred cee-EeccccCCceeEEEECC-CCCEEEEecCCCcEEEEEecCCC
Q psy18231 239 QPV-RRWREHASKVTCVKFNE-DSSVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 239 ~~~-~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~ 281 (540)
... ..+ ..-.....++++| ++.+.++-..++.|..+|..++.
T Consensus 218 ~~~~~~~-~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~ 261 (433)
T 4hw6_A 218 FTERLSL-CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGT 261 (433)
T ss_dssp TCCEEEE-EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCC
T ss_pred eeccccc-cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCe
Confidence 110 111 1234456788999 66655555567778888876543
No 292
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=98.10 E-value=1.4e-06 Score=81.27 Aligned_cols=94 Identities=11% Similarity=0.041 Sum_probs=67.0
Q ss_pred cceecCCceEEeccCCCC---CHH-------HHHHHHHcCCCEEEeeeeecccccccc--------hhh---cccc--cc
Q psy18231 10 RSTLLKNLKHCDSTLWTS---KLN-------FRQLVRSHNVDLCFTPMIIADSFIKSS--------KAR---NNEF--ST 66 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~---~~~-------~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~--~~ 66 (540)
+++.|++|+++|||++.+ +.| ||+.++ |+++++||++.....-+.. ... .+.+ ..
T Consensus 23 g~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~av 100 (376)
T 1icp_A 23 GKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRST--NGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAV 100 (376)
T ss_dssp TTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCC--TTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHHHHH
T ss_pred CCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcC--CeeEEEECceeeccccccCcccCccCCHHHHHHHHHHHHHH
Confidence 568899999999999986 556 777776 7999999998765322211 111 2222 13
Q ss_pred CCCCCCEEEEEec--------------------------------------CCh------------hHHHHHHHHh-cCC
Q psy18231 67 SPEDTPLVVQFAS--------------------------------------NNH------------DDFVRATQYV-APH 95 (540)
Q Consensus 67 ~~~~~~~~~q~~~--------------------------------------~~~------------~~~~~~~~~~-~~~ 95 (540)
+..+.++++|++. ..| +++++||+.. +.+
T Consensus 101 h~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~a~~aG 180 (376)
T 1icp_A 101 HAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAG 180 (376)
T ss_dssp HHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHHHHHTT
T ss_pred HhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 5667889999986 123 4788888764 459
Q ss_pred CCeEeeccCC
Q psy18231 96 CNGVDLNCGC 105 (540)
Q Consensus 96 ~~~id~~~gc 105 (540)
.|.|++|.+|
T Consensus 181 fDgVEih~a~ 190 (376)
T 1icp_A 181 FDGVEIHGAH 190 (376)
T ss_dssp CSEEEEEECT
T ss_pred CCEEEEcCcc
Confidence 9999999997
No 293
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=98.10 E-value=2.3e-06 Score=80.04 Aligned_cols=88 Identities=6% Similarity=0.030 Sum_probs=68.4
Q ss_pred ceecCCceEEeccCCCCCHH-------HHHHHHHcCCCEEEeeeeecccccccchhhccccccCCCCCCEEEEEec-CCh
Q psy18231 11 STLLKNLKHCDSTLWTSKLN-------FRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFAS-NNH 82 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~-------~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~ 82 (540)
+..+++++++||| |+++++ ++++|+++|+.+++++|.+. .+ +. +.....+.|+.+|+++ .++
T Consensus 90 G~~l~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~-~l-e~-------v~~~~~~~~~~~QLy~~~d~ 159 (392)
T 2nzl_A 90 GQRVSMPICVGAT-AMQRMAHVDGELATVRACQSLGTGMMLSSWATS-SI-EE-------VAEAGPEALRWLQLYIYKDR 159 (392)
T ss_dssp TEEESSSEEECCC-SCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSS-CH-HH-------HHHHCTTSEEEEEECCBSSH
T ss_pred CEecCCceEeccc-cccccccchHHHHHHHHHHHcCCCeeccchHHH-HH-HH-------HHHhcCCCcEEEEEEecCCH
Confidence 4557889999999 999998 99999999999999998651 12 11 1111246799999987 678
Q ss_pred hHHHHHHHHhcC-CCCeEeeccCCCce
Q psy18231 83 DDFVRATQYVAP-HCNGVDLNCGCPQR 108 (540)
Q Consensus 83 ~~~~~~~~~~~~-~~~~id~~~gc~~~ 108 (540)
+.+.+.++..++ +++.++++++||..
T Consensus 160 ~~~~~~~~ra~~~G~~al~itvd~p~~ 186 (392)
T 2nzl_A 160 EVTKKLVRQAEKMGYKAIFVTVDTPYL 186 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCc
Confidence 777777776544 88999999999975
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.08 E-value=0.0025 Score=58.00 Aligned_cols=101 Identities=12% Similarity=0.288 Sum_probs=65.5
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeC----CC---eEEE-eeC--CCeEEEEEcC--CCceeE
Q psy18231 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD----SS---QIAS-GAS--DKSVILWEVT--TGQPVR 242 (540)
Q Consensus 175 dg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~----~~---~l~s-~s~--dg~i~iwd~~--~~~~~~ 242 (540)
...+++.....+-+.+||+ +|+.+..+.. +.++.+..-|+ |+ ++++ .-. +++|.+|++. ++. +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 4455666677889999999 8999988863 56677666663 22 2233 333 5799999773 333 44
Q ss_pred eccc------cC-CceeEEEE--CCC-CC-EEEEecCCCcEEEEEecC
Q psy18231 243 RWRE------HA-SKVTCVKF--NED-SS-VVISGSQDNTVMMWDVKS 279 (540)
Q Consensus 243 ~~~~------h~-~~v~~~~~--~~~-~~-~l~s~~~dg~i~iwd~~~ 279 (540)
.+.. .. ..+..+++ +|. +. +++....+|.+..|++..
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~ 162 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKA 162 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEe
Confidence 4421 11 55666777 664 33 677777888888888754
No 295
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.00076 Score=64.88 Aligned_cols=113 Identities=7% Similarity=0.122 Sum_probs=73.4
Q ss_pred cCeEEEEeCC-CCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeC-CC----eEEEEEcCCC
Q psy18231 165 SGLMHTRFPV-DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS-DK----SVILWEVTTG 238 (540)
Q Consensus 165 ~~v~~v~~sp-dg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~-dg----~i~iwd~~~~ 238 (540)
.....++++| ++..|.++...+.|+.+|+.++....... .......++|++++++|+.+.. ++ .+.+.+ ..+
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g 214 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RES 214 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGG
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCC
Confidence 3567899998 46667666655889999987766544333 4566789999999996665554 22 233344 334
Q ss_pred cee--EeccccCCceeEEEECC-CCCEEEEecCCCcEEEEEecCC
Q psy18231 239 QPV--RRWREHASKVTCVKFNE-DSSVVISGSQDNTVMMWDVKSR 280 (540)
Q Consensus 239 ~~~--~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~ 280 (540)
... ..+. .......++++| ++.++++-..++.|..++....
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 322 2222 234467788999 6776666666788888887654
No 296
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.06 E-value=0.0058 Score=54.57 Aligned_cols=252 Identities=10% Similarity=0.100 Sum_probs=149.8
Q ss_pred eeeeecccccceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCC
Q psy18231 148 SIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227 (540)
Q Consensus 148 ~i~~~~~~~~~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d 227 (540)
.+.+.+...........-.--+.-.+|..+.||.-. ..++.|+|+++.+.++.+.- ...|.-=.|-.+ +.|+-.+.
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~lVT~- 125 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVTD- 125 (365)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SEEEEEES-
T ss_pred EEEEEECCCCCCccccccccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCC-CeEEEEcC-
Confidence 455555444332222222223344589888888665 68999999999999998874 456655566533 44555443
Q ss_pred CeEEEEEcCC-CceeEecccc----CCceeEEEECCCCCEEEEecC-------CCcEEEEEecCCCCCCcchhhhhHhhh
Q psy18231 228 KSVILWEVTT-GQPVRRWREH----ASKVTCVKFNEDSSVVISGSQ-------DNTVMMWDVKSRSHHPIQVRCLNEALK 295 (540)
Q Consensus 228 g~i~iwd~~~-~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~ 295 (540)
..|.-|+++. ..+.+.+..| ...|.....+++.++++..|- .|.+.+|..+.....
T Consensus 126 taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ------------ 193 (365)
T 2xzh_A 126 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ------------ 193 (365)
T ss_dssp SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE------------
T ss_pred CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccc------------
Confidence 5799999975 3455555544 345777777888887665432 245666666544311
Q ss_pred hcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhh
Q psy18231 296 EARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALK 375 (540)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (540)
.++
T Consensus 194 -----------------------------------------------------------------------------~ie 196 (365)
T 2xzh_A 194 -----------------------------------------------------------------------------PIE 196 (365)
T ss_dssp -----------------------------------------------------------------------------EEC
T ss_pred -----------------------------------------------------------------------------eee
Confidence 222
Q ss_pred cccccEEEEEecC-----CeeEeee---CCCeEEEEeCCCC---ce-----EEeee------CCceEEEEEecCCcEEEe
Q psy18231 376 EARDSITSVHVSD-----HEILTAS---LDCRIRRYDIRTG---NL-----VTDYV------GEPIVDACFTRDCQCILT 433 (540)
Q Consensus 376 ~~~~~v~~l~~~~-----~~l~~~~---~dg~i~iwd~~~~---~~-----~~~~~------~~~i~~~~~sp~~~~l~~ 433 (540)
+|...-..+.... .+++.+. ..+++.+-++... .. ...+. .+--.++..|+....+..
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 3332222222211 1112111 1257888887432 11 11111 134678888998889999
Q ss_pred ecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc
Q psy18231 434 CSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 434 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~ 494 (540)
-+.-|.+++||++++.++..-+-....|... +.+....=++.....|.|.--.+.+.+.
T Consensus 277 iTK~G~ihlyDleTgt~i~~nrIS~d~iF~t--a~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTCIYMNRISGETIFVT--APHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEE--EEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred EeCCcEEEEEEcccCcEEEEeccCCCceEEe--cccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 9999999999999999887776666665444 4433333455555777776666555443
No 297
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.05 E-value=5.6e-06 Score=75.94 Aligned_cols=97 Identities=10% Similarity=0.094 Sum_probs=74.9
Q ss_pred cceecCCceEEeccCCC-C-CHHHHHHHHHcCCCEEEeeeeecccccccchhh----------------------ccccc
Q psy18231 10 RSTLLKNLKHCDSTLWT-S-KLNFRQLVRSHNVDLCFTPMIIADSFIKSSKAR----------------------NNEFS 65 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~-~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~ 65 (540)
.++.+++++++|| |+ + +.+|++.+.+.|+++++++|++......+.+.+ ...+.
T Consensus 7 ~g~~l~npv~~Aa--g~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~ 84 (311)
T 1jub_A 7 ANAKFANPFMNAS--GVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVL 84 (311)
T ss_dssp TTEEESSSEEECT--TSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHH
T ss_pred CCEEcCCCcEECC--CCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHH
Confidence 4678899999996 55 4 899999999999999999999987643221100 01111
Q ss_pred cC--CC--CCCEEEEEecCChhHHHHHHHHhcC-CCC-eEeeccCCCce
Q psy18231 66 TS--PE--DTPLVVQFASNNHDDFVRATQYVAP-HCN-GVDLNCGCPQR 108 (540)
Q Consensus 66 ~~--~~--~~~~~~q~~~~~~~~~~~~~~~~~~-~~~-~id~~~gc~~~ 108 (540)
.. +. +.|+++|+.+.+++++.++++.+.+ +.| .|++|++||..
T Consensus 85 ~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~ 133 (311)
T 1jub_A 85 KNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNV 133 (311)
T ss_dssp HHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS
T ss_pred HHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC
Confidence 11 22 6899999999999999999998776 679 99999999985
No 298
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=98.01 E-value=8.6e-06 Score=76.07 Aligned_cols=87 Identities=7% Similarity=0.035 Sum_probs=67.5
Q ss_pred ceecCCceEEeccCCCCCHH-------HHHHHHHcCCCEEEeeeeecccccccchhhccccccCCCCCCEEEEEe-cCCh
Q psy18231 11 STLLKNLKHCDSTLWTSKLN-------FRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFA-SNNH 82 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~-------~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~-~~~~ 82 (540)
+..+++++++||| |+++++ |++.|+++|+.+++++|.+.. ..++..... .|..+|++ +.++
T Consensus 67 G~~~~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~---------ieev~~~~~-~~~~~QLy~~~d~ 135 (370)
T 1gox_A 67 GFKISMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWATSS---------VEEVASTGP-GIRFFQLYVYKDR 135 (370)
T ss_dssp TEEESSSEEECCC-SCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSC---------HHHHHTTCC-CCEEEEECCBSSH
T ss_pred CcccCCceeEccc-chhhhccchHHHHHHHHHHHcCCCeeccCCCCCC---------HHHHHhhcC-CCceEEEecCCCc
Confidence 4456889999999 999999 999999999999999986431 112211112 78999996 8888
Q ss_pred hHHHHHHHHhcC-CCCeEeeccCCCce
Q psy18231 83 DDFVRATQYVAP-HCNGVDLNCGCPQR 108 (540)
Q Consensus 83 ~~~~~~~~~~~~-~~~~id~~~gc~~~ 108 (540)
+.+.+.++...+ +++.|+++++||..
T Consensus 136 ~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 136 NVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 877777665544 88999999999975
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.98 E-value=0.00043 Score=62.98 Aligned_cols=133 Identities=11% Similarity=0.223 Sum_probs=86.7
Q ss_pred CCeEEEEeC--CCCceEEeee--------C-CceEEEEE--ecC-Cc-EEEeecCCCeEEEEecc-------ccchhhhh
Q psy18231 397 DCRIRRYDI--RTGNLVTDYV--------G-EPIVDACF--TRD-CQ-CILTCSTDECLRLFDKA-------TGELLEEY 454 (540)
Q Consensus 397 dg~i~iwd~--~~~~~~~~~~--------~-~~i~~~~~--sp~-~~-~l~~~~~dg~i~i~d~~-------~~~~~~~~ 454 (540)
+++|.+|++ .+++ +..+. . ..+..+++ +|. ++ ++++...+|.+..|++. +.+.+++|
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 578999966 3443 43331 1 45667777 774 43 68888889999999883 44667777
Q ss_pred ccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEec-----CCcceeEEEecccceeeeEEEE--cCCCc-EEEeec--C
Q psy18231 455 KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV-----DSSQISTLIHSVGKAVVNSLCS--HPTRK-HIMSAC--G 524 (540)
Q Consensus 455 ~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~-----~~~~~~~~~~~~~~~~v~~l~~--s~d~~-~l~s~~--d 524 (540)
..... +.. |...+....|+.+-++.-|..++.+ +++.+..+....-...+..|++ .++++ +|++++ +
T Consensus 177 ~lgsq-~Eg--cvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~ 253 (355)
T 3amr_A 177 KMNSQ-TEG--MAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN 253 (355)
T ss_dssp ECSSC-EEE--EEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG
T ss_pred cCCCC-cce--EEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC
Confidence 65443 332 3677888899999999776666644 2334433321122246888887 55555 666666 8
Q ss_pred CeeEEEEcc
Q psy18231 525 NNVKLWTAE 533 (540)
Q Consensus 525 ~~i~iw~~~ 533 (540)
+++.+|+.+
T Consensus 254 ~s~~Vydr~ 262 (355)
T 3amr_A 254 SSYAIYDRQ 262 (355)
T ss_dssp TEEEEEESS
T ss_pred CEEEEEECC
Confidence 899999986
No 300
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.96 E-value=0.0065 Score=62.84 Aligned_cols=231 Identities=10% Similarity=0.030 Sum_probs=132.5
Q ss_pred EEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCe-EEEeeCCCeEEEEEcCCC----ceeEeccccCCcee
Q psy18231 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IASGASDKSVILWEVTTG----QPVRRWREHASKVT 252 (540)
Q Consensus 178 ~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~-l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~ 252 (540)
+|+.+. ...|+..++........+. ....+..++|.+.... +++-...+.|..+++... .....+........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 444333 4568888887665444444 4566788999985444 455556688999988652 22333333445677
Q ss_pred EEEECCCCC-EEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecc
Q psy18231 253 CVKFNEDSS-VVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKY 331 (540)
Q Consensus 253 ~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (540)
.|++.+.+. +.++-...+.|.+.++.......+
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l---------------------------------------------- 508 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL---------------------------------------------- 508 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE----------------------------------------------
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEE----------------------------------------------
Confidence 899987664 445555667888888764431000
Q ss_pred cccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeC--CCeEEEEeCCC
Q psy18231 332 LNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASL--DCRIRRYDIRT 407 (540)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~--dg~i~iwd~~~ 407 (540)
+...-.....|+++| ..|+.+.. .+.|...+++.
T Consensus 509 ------------------------------------------~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 509 ------------------------------------------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp ------------------------------------------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred ------------------------------------------EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 001112356778876 45555442 36788888875
Q ss_pred CceEEeeeC--CceEEEEEecCCcEEEee-cCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcE
Q psy18231 408 GNLVTDYVG--EPIVDACFTRDCQCILTC-STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 484 (540)
Q Consensus 408 ~~~~~~~~~--~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i 484 (540)
......+.. .....|++++.+..|+.+ ...+.|..+|+........+.........+.+++.. +.++++-...+.|
T Consensus 547 ~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I 625 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAI 625 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEE
Confidence 444333332 468899999766655554 456789999985433322222211111223334432 2334444566788
Q ss_pred EEEEecCCcceeEEE
Q psy18231 485 YKWQLVDSSQISTLI 499 (540)
Q Consensus 485 ~iwd~~~~~~~~~~~ 499 (540)
...|..+++.+..+.
T Consensus 626 ~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 626 FSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEETTTCCCCEEEE
T ss_pred EEEeCCCCcceEEee
Confidence 888877887776665
No 301
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.96 E-value=0.0088 Score=54.76 Aligned_cols=205 Identities=8% Similarity=-0.028 Sum_probs=122.6
Q ss_pred eecCeEEEEeCCCCCEEE-EeeCCCcEEEEcCCCCee-EEEeecCCcceeEEEEee-CCCeEEEeeCCCeEEEEEcCCCc
Q psy18231 163 VLSGLMHTRFPVDGSYCL-TCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAAC-DSSQIASGASDKSVILWEVTTGQ 239 (540)
Q Consensus 163 h~~~v~~v~~spdg~~la-t~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg~i~iwd~~~~~ 239 (540)
.......+.|++.+..|. +-...+.|..+++..+.. ...+...-.....+++.+ .++++++-...+.|.++++....
T Consensus 33 ~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 33 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 345677899998655554 555578899999876532 122222234567899987 44555566667899999986543
Q ss_pred eeEeccccCCceeEEEECCCCCEEEEec--CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccccc
Q psy18231 240 PVRRWREHASKVTCVKFNEDSSVVISGS--QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317 (540)
Q Consensus 240 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (540)
....+.........+++.|.+..|+.+. ..+.|...++.......+
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~-------------------------------- 160 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII-------------------------------- 160 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE--------------------------------
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE--------------------------------
Confidence 3333334445678999998655555544 245666666543221000
Q ss_pred CceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--Cee-Eee
Q psy18231 318 GLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEI-LTA 394 (540)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l-~~~ 394 (540)
....-.....+++++ +.| ++-
T Consensus 161 --------------------------------------------------------~~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 161 --------------------------------------------------------INSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp --------------------------------------------------------ECSSCSCEEEEEEETTTTEEEEEE
T ss_pred --------------------------------------------------------EECCCCCccEEEEeccCCEEEEEE
Confidence 000112345777875 444 444
Q ss_pred eCCCeEEEEeCCCCceEEeee--CCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhcc
Q psy18231 395 SLDCRIRRYDIRTGNLVTDYV--GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 456 (540)
Q Consensus 395 ~~dg~i~iwd~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 456 (540)
+..+.|..+|++......... ......+++. .+.++.+-...+.|..+|..+++....+..
T Consensus 185 ~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 185 AKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 567889999987433322222 2345677775 345566666778999999888876655543
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.95 E-value=0.0051 Score=57.36 Aligned_cols=100 Identities=10% Similarity=0.061 Sum_probs=60.7
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCee--EEEee---cCCcceeEEEEeeC---CCeEEEe-eCC-----CeE
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLL--LKTYG---GHAHEVNDATAACD---SSQIASG-ASD-----KSV 230 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~--~~~~~---~h~~~v~~l~~sp~---~~~l~s~-s~d-----g~i 230 (540)
..-..++|.|||++++ +..+|.|.+++ +++. +..+. ........++|+|+ +..|..+ ..+ +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4567899999998554 45679999998 4432 22221 12356789999998 4454444 322 678
Q ss_pred EEEEcCCCc-----ee-Eecc---ccCCceeEEEECCCCCEEEEec
Q psy18231 231 ILWEVTTGQ-----PV-RRWR---EHASKVTCVKFNEDSSVVISGS 267 (540)
Q Consensus 231 ~iwd~~~~~-----~~-~~~~---~h~~~v~~~~~~~~~~~l~s~~ 267 (540)
..++...+. .+ ..+. ........++|.|||.+.++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 888876432 11 1122 1112346789999987666544
No 303
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=97.92 E-value=5.2e-06 Score=78.07 Aligned_cols=110 Identities=10% Similarity=0.095 Sum_probs=73.6
Q ss_pred cceecCCceEEeccCCCC---CHH-------HHHHHHHcCCCEEEeeeeecccccccc--------hhh---cccc--cc
Q psy18231 10 RSTLLKNLKHCDSTLWTS---KLN-------FRQLVRSHNVDLCFTPMIIADSFIKSS--------KAR---NNEF--ST 66 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~---~~~-------~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~--~~ 66 (540)
+.+.|++|+++|||++.. +.| ||+.++ |+++++||++.....-+.. ... .+.+ ..
T Consensus 25 g~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~av 102 (402)
T 2hsa_B 25 GKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRAT--AGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVV 102 (402)
T ss_dssp TTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC--TTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHHHHH
T ss_pred CCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhc--cCCEEEecceeeccccccCCCCcccCCHHHHHHHHHHHHHH
Confidence 468899999999999987 677 565554 5999999998765322211 111 2222 12
Q ss_pred CCCCCCEEEEEec----------------------------------------CCh------------hHHHHHHHHh-c
Q psy18231 67 SPEDTPLVVQFAS----------------------------------------NNH------------DDFVRATQYV-A 93 (540)
Q Consensus 67 ~~~~~~~~~q~~~----------------------------------------~~~------------~~~~~~~~~~-~ 93 (540)
+..+.++++|++- ..| +++++||+.. +
T Consensus 103 h~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~ 182 (402)
T 2hsa_B 103 HAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIE 182 (402)
T ss_dssp HHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5667889999982 124 5788888764 4
Q ss_pred CCCCeEeeccCC---------CceEEEeccccceecc
Q psy18231 94 PHCNGVDLNCGC---------PQRWAIKEGYGCALLS 121 (540)
Q Consensus 94 ~~~~~id~~~gc---------~~~~~~~~g~g~~l~~ 121 (540)
.+.|.|++|++| |......+.+|..+..
T Consensus 183 AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslen 219 (402)
T 2hsa_B 183 AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLAN 219 (402)
T ss_dssp TTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHH
T ss_pred cCCCEEEECCccchHHHhccCCccCccCCccCcChhh
Confidence 599999999997 6544444455555543
No 304
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.92 E-value=0.04 Score=59.67 Aligned_cols=111 Identities=12% Similarity=0.031 Sum_probs=68.9
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEe-ecCCcceeEEEEeeC------CCeEEEeeC-CCeEEEEEcCC
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY-GGHAHEVNDATAACD------SSQIASGAS-DKSVILWEVTT 237 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~sp~------~~~l~s~s~-dg~i~iwd~~~ 237 (540)
.|...+.+. .+++.++ ++.+.++++..++..... ..-...|.|+++.|. +++++.|.. |++|+|+++.+
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 344444432 3555554 577878777655322111 123568999999863 468999996 99999999987
Q ss_pred CceeEeccc-cCCceeEEEEC--CCCCEEEEecCCCcEEEEEecC
Q psy18231 238 GQPVRRWRE-HASKVTCVKFN--EDSSVVISGSQDNTVMMWDVKS 279 (540)
Q Consensus 238 ~~~~~~~~~-h~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~~~ 279 (540)
.+.+....- ......++.+. ....+|..|-.||.+.-+.+..
T Consensus 592 l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 592 FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECT
T ss_pred CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcC
Confidence 766543221 11233444332 2345788888999887776643
No 305
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=0.0037 Score=60.33 Aligned_cols=153 Identities=9% Similarity=0.051 Sum_probs=89.4
Q ss_pred EEEEecC---CeeEeeeCCCeEEEEeCC-------CCce--------------EEeee-CCceEEEEEecCCcEE-Eeec
Q psy18231 382 TSVHVSD---HEILTASLDCRIRRYDIR-------TGNL--------------VTDYV-GEPIVDACFTRDCQCI-LTCS 435 (540)
Q Consensus 382 ~~l~~~~---~~l~~~~~dg~i~iwd~~-------~~~~--------------~~~~~-~~~i~~~~~sp~~~~l-~~~~ 435 (540)
..++++| .++++-..++.|..+|++ ++.. +.... ......++|+|+|++| ++-+
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~ 329 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI 329 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC
Confidence 3556666 345555677889999987 4543 11222 2446899999999954 4445
Q ss_pred CCCeEEEEecc--ccch--hhhhccC------c---------CCcceEEEEec-------CCCCeEEEeeCCCcEEEEEe
Q psy18231 436 TDECLRLFDKA--TGEL--LEEYKGH------K---------SGDFRIECCLD-------SKDSQIFCGSSDGKIYKWQL 489 (540)
Q Consensus 436 ~dg~i~i~d~~--~~~~--~~~~~~~------~---------~~v~~~~~~~s-------~~~~~l~s~s~dg~i~iwd~ 489 (540)
....|+.+|.. .+.. ...+.+. . ..-... ++.. ++|.++++=...+.|+.++
T Consensus 330 ~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g-v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~- 407 (496)
T 3kya_A 330 NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG-VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT- 407 (496)
T ss_dssp TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE-EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-
T ss_pred CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE-EEEccccccccCCCeEEEEECCCCEEEEEe-
Confidence 67889886643 2221 0112111 0 001101 1333 4556666666778899998
Q ss_pred cCCcceeEEEec------------c----------cceeeeEEEEcCC-CcEEEeec-CCeeEEEEcccccC
Q psy18231 490 VDSSQISTLIHS------------V----------GKAVVNSLCSHPT-RKHIMSAC-GNNVKLWTAEEDYG 537 (540)
Q Consensus 490 ~~~~~~~~~~~~------------~----------~~~~v~~l~~s~d-~~~l~s~~-d~~i~iw~~~~~~~ 537 (540)
.++ .+.++... + .-.....|+++++ |.+.++=. .+.|+.++++.+..
T Consensus 408 ~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 408 PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 566 34444311 0 0123678999997 66655555 88999999987654
No 306
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.91 E-value=0.015 Score=54.22 Aligned_cols=252 Identities=10% Similarity=0.100 Sum_probs=154.7
Q ss_pred eeeeecccccceeeeeecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCC
Q psy18231 148 SIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227 (540)
Q Consensus 148 ~i~~~~~~~~~~~~~h~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d 227 (540)
.+-+-|...........-.--+.-.+|..+.||.=. ..++.|+|+++...++.+.-. ..|.-=.|-.+. .|+-.+ +
T Consensus 49 ~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~-~l~lVT-~ 124 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT-D 124 (494)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETT-EEEEEC-S
T ss_pred eEEEEECCCCCcceecccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCC-eEEEEc-C
Confidence 455555544333222222333445688888888665 689999999999999988754 456555666443 455444 3
Q ss_pred CeEEEEEcCCC-ceeEecccc----CCceeEEEECCCCCEEEEecC-------CCcEEEEEecCCCCCCcchhhhhHhhh
Q psy18231 228 KSVILWEVTTG-QPVRRWREH----ASKVTCVKFNEDSSVVISGSQ-------DNTVMMWDVKSRSHHPIQVRCLNEALK 295 (540)
Q Consensus 228 g~i~iwd~~~~-~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~ 295 (540)
..|.-|+++.. .+...+..| ...|.....+++.++++..|- .|.+.+|..+.....
T Consensus 125 taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ------------ 192 (494)
T 1bpo_A 125 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ------------ 192 (494)
T ss_dssp SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE------------
T ss_pred CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc------------
Confidence 57999999743 455555544 346777777888887764432 356677776655421
Q ss_pred hcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhh
Q psy18231 296 EARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALK 375 (540)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (540)
.+.
T Consensus 193 -----------------------------------------------------------------------------~ie 195 (494)
T 1bpo_A 193 -----------------------------------------------------------------------------PIE 195 (494)
T ss_dssp -----------------------------------------------------------------------------EEC
T ss_pred -----------------------------------------------------------------------------hhe
Confidence 223
Q ss_pred cccccEEEEEecC-----CeeEeeeC---CCeEEEEeCCCC---c-----eEEeee------CCceEEEEEecCCcEEEe
Q psy18231 376 EARDSITSVHVSD-----HEILTASL---DCRIRRYDIRTG---N-----LVTDYV------GEPIVDACFTRDCQCILT 433 (540)
Q Consensus 376 ~~~~~v~~l~~~~-----~~l~~~~~---dg~i~iwd~~~~---~-----~~~~~~------~~~i~~~~~sp~~~~l~~ 433 (540)
+|...-..+.... ..+..+.. .+++.+-++... . ....+. ..--.++..|+....+..
T Consensus 196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 3333333332221 11222221 368888888543 1 111111 134678889998899999
Q ss_pred ecCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc
Q psy18231 434 CSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 494 (540)
Q Consensus 434 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~ 494 (540)
-+.-|.+++||+.++.++..-+-....|... +.+....=++.....|.|.--.+.+...
T Consensus 276 iTK~G~i~lyDleTgt~i~~nrIs~~~iF~t--~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTCIYMNRISGETIFVT--APHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEE--EEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred EecCceEEEEecccceeeeeecccCCceEEe--cccCCCCcEEEEccCceEEEEEEccccc
Confidence 9999999999999999887776666666543 4444444566666777777666655543
No 307
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.91 E-value=0.0097 Score=54.83 Aligned_cols=105 Identities=13% Similarity=0.140 Sum_probs=60.4
Q ss_pred ccEEEEEecC-CeeEeeeCCCeEEEEeCCCCceEEeee------CCceEEEEEecCCcEEEeecCCCeEEEEeccccchh
Q psy18231 379 DSITSVHVSD-HEILTASLDCRIRRYDIRTGNLVTDYV------GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELL 451 (540)
Q Consensus 379 ~~v~~l~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~ 451 (540)
..+..+.+.+ ..++..+.+|.+++.+.+.++.-..+. ...+..+.+.+++.+++++. +|.+ .+....++.-
T Consensus 205 ~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW 282 (327)
T 2xbg_A 205 RRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTW 282 (327)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSC
T ss_pred CccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCccc
Confidence 3456666766 556666778887776433333322221 13588899998887777655 5666 3333434332
Q ss_pred hhhc---cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEE
Q psy18231 452 EEYK---GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488 (540)
Q Consensus 452 ~~~~---~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd 488 (540)
..+. .....++.+ .|.+++ .+++++.+|.|.-++
T Consensus 283 ~~~~~~~~~~~~~~~v--~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 283 QQDVDVKKVPSNFYKI--LFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp EECGGGTTSSSCCCEE--EEEETT-EEEEECSTTEEEEEC
T ss_pred EEcCccCCCCCCeEEE--EEECCC-ceEEEcCCceEEEEc
Confidence 2222 223455666 555444 466677889877665
No 308
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=97.90 E-value=1.6e-05 Score=74.09 Aligned_cols=93 Identities=6% Similarity=0.038 Sum_probs=69.3
Q ss_pred ceecCCceEEeccCCCC-------CHHHHHHHHHcCCCEEEeeeeecccccccch--hhccccccCCCCCCEEEEEe-cC
Q psy18231 11 STLLKNLKHCDSTLWTS-------KLNFRQLVRSHNVDLCFTPMIIADSFIKSSK--ARNNEFSTSPEDTPLVVQFA-SN 80 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~-------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~q~~-~~ 80 (540)
+..+++++++|||+|++ +++++++|+++|+.+.+++|.++ ++... ...+.+.....+.|++.|+. +.
T Consensus 51 g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~pv~~~i~~~~ 127 (349)
T 1p0k_A 51 ELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA---LKDPSERLSYEIVRKENPNGLIFANLGSEA 127 (349)
T ss_dssp TEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT---TTCHHHHHHHHHHHHHCSSSCEEEEEETTC
T ss_pred CcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc---ccCcccccceehhhhhCCCceeEEeecCCC
Confidence 45578899999999999 99999999999999999988654 22211 11122222345789999999 78
Q ss_pred ChhHHHHHHHHhcCCCCeEeeccCCCce
Q psy18231 81 NHDDFVRATQYVAPHCNGVDLNCGCPQR 108 (540)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~id~~~gc~~~ 108 (540)
+++.+.++++. .+++.|++|.+||..
T Consensus 128 ~~~~~~~~~~~--~gad~i~i~~~~~~~ 153 (349)
T 1p0k_A 128 TAAQAKEAVEM--IGANALQIHLNVIQE 153 (349)
T ss_dssp CHHHHHHHHHH--TTCSEEEEEECTTTT
T ss_pred CHHHHHHHHHh--cCCCeEEecccchhh
Confidence 88887766554 357899999999864
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.89 E-value=0.0018 Score=59.02 Aligned_cols=103 Identities=11% Similarity=0.040 Sum_probs=54.7
Q ss_pred cCCeeEeeeCC-----CeEEEEeCCCCceEEe--eeCCceEEEEEecCCcEEEeecCC-----CeEEEEeccccch--hh
Q psy18231 387 SDHEILTASLD-----CRIRRYDIRTGNLVTD--YVGEPIVDACFTRDCQCILTCSTD-----ECLRLFDKATGEL--LE 452 (540)
Q Consensus 387 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~--~~ 452 (540)
...+++.|+.+ ..+.+||+.+.+-... +........+..-++++++.|+.+ ..+.+||..+.+- +.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 33555555543 4578888887653322 111111111222367788887764 4689999876542 22
Q ss_pred hhccCcCCcceEEEEecCCCCeEEEeeCC-----CcEEEEEecCCc
Q psy18231 453 EYKGHKSGDFRIECCLDSKDSQIFCGSSD-----GKIYKWQLVDSS 493 (540)
Q Consensus 453 ~~~~~~~~v~~~~~~~s~~~~~l~s~s~d-----g~i~iwd~~~~~ 493 (540)
.+... ..... +...+++.++.|+.+ ..|.+||..+.+
T Consensus 239 ~~p~~--r~~~~--~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 239 SMTTP--RCYVG--ATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CCSSC--CBSCE--EEEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCCc--cccee--EEEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 22111 11111 122366777788765 357888877653
No 310
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.82 E-value=1.9e-05 Score=80.90 Aligned_cols=112 Identities=17% Similarity=0.125 Sum_probs=73.4
Q ss_pred cceecCCceEEeccCC-CCCH--HHHHHHHHc------CCCEEEeeeeecccccccchh--------h---cccc--ccC
Q psy18231 10 RSTLLKNLKHCDSTLW-TSKL--NFRQLVRSH------NVDLCFTPMIIADSFIKSSKA--------R---NNEF--STS 67 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~-~~~~--~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~---~~~~--~~~ 67 (540)
+++.+++|++||||++ .++. |++++++.| |+++.+|||+.....-+..+. . .+.+ ..+
T Consensus 12 g~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh 91 (671)
T 1ps9_A 12 GFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVH 91 (671)
T ss_dssp SSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHH
T ss_pred CCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHH
Confidence 4678999999999998 6653 456555554 899999999875432221111 1 1111 124
Q ss_pred CCCCCEEEEEecC----------------------Ch------------hHHHHHHHHh-cCCCCeEeeccCC-------
Q psy18231 68 PEDTPLVVQFASN----------------------NH------------DDFVRATQYV-APHCNGVDLNCGC------- 105 (540)
Q Consensus 68 ~~~~~~~~q~~~~----------------------~~------------~~~~~~~~~~-~~~~~~id~~~gc------- 105 (540)
..+.++++|++.. .| ++++++|+.. +.+.|.|++|.+|
T Consensus 92 ~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qF 171 (671)
T 1ps9_A 92 QEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEF 171 (671)
T ss_dssp HTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHH
T ss_pred hcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHh
Confidence 6678999999874 33 5788888764 4599999999998
Q ss_pred --CceEEEeccccceecc
Q psy18231 106 --PQRWAIKEGYGCALLS 121 (540)
Q Consensus 106 --~~~~~~~~g~g~~l~~ 121 (540)
|......+.+|..+..
T Consensus 172 lsp~~n~r~d~yGgs~~~ 189 (671)
T 1ps9_A 172 LTLRTNQRSDQWGGDYRN 189 (671)
T ss_dssp HCTTTCCCCSTTSSSHHH
T ss_pred CCCccCCCcCcCCCcHHH
Confidence 4433334445555544
No 311
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=97.82 E-value=3.3e-05 Score=70.90 Aligned_cols=99 Identities=12% Similarity=0.074 Sum_probs=74.7
Q ss_pred cceecCCceEEeccCCCCCHHHHHHHHHcCCCEEEeeeeecccccccc-------------------h-hh--cccccc-
Q psy18231 10 RSTLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSS-------------------K-AR--NNEFST- 66 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~-~~--~~~~~~- 66 (540)
.++.+++++++|++.--.+..+++.+.+.|+++++++|++......+. + .. ...+..
T Consensus 9 ~g~~l~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~ 88 (314)
T 2e6f_A 9 LDHVFANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDL 88 (314)
T ss_dssp TTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHT
T ss_pred CCEecCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHH
Confidence 467889999999866224789999999999999999999887632110 0 00 011211
Q ss_pred -CCCCCCEEEEEecCChhHHHHHHHHhcC-CCC---eEeeccCCCce
Q psy18231 67 -SPEDTPLVVQFASNNHDDFVRATQYVAP-HCN---GVDLNCGCPQR 108 (540)
Q Consensus 67 -~~~~~~~~~q~~~~~~~~~~~~~~~~~~-~~~---~id~~~gc~~~ 108 (540)
...+.|+++|+.+.+++++.++++.+.+ +.| .|++|++||..
T Consensus 89 ~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~ 135 (314)
T 2e6f_A 89 HDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV 135 (314)
T ss_dssp CCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS
T ss_pred hhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC
Confidence 2247899999999999999999998776 668 99999999985
No 312
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.79 E-value=0.0044 Score=55.93 Aligned_cols=106 Identities=10% Similarity=0.119 Sum_probs=70.1
Q ss_pred EEEeCCCCCEEEEee-CCCcEEEEcCCCCeeEEE-eec----C--CcceeEEEE---eeCCCeEEEee------------
Q psy18231 169 HTRFPVDGSYCLTCG-SDKKIKLWNPYRNLLLKT-YGG----H--AHEVNDATA---ACDSSQIASGA------------ 225 (540)
Q Consensus 169 ~v~~spdg~~lat~~-~dg~i~iwd~~~~~~~~~-~~~----h--~~~v~~l~~---sp~~~~l~s~s------------ 225 (540)
+++|.+....+..++ ..++|..||...+..... +.+ . ...+..+.| .|+++++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 567877555555555 789999999876643333 221 1 114578999 58877777543
Q ss_pred -CCCeEEEEEcC---CCceeEecc--cc-----------CCceeEEEECCCCCEEEEecCC-CcEEE
Q psy18231 226 -SDKSVILWEVT---TGQPVRRWR--EH-----------ASKVTCVKFNEDSSVVISGSQD-NTVMM 274 (540)
Q Consensus 226 -~dg~i~iwd~~---~~~~~~~~~--~h-----------~~~v~~~~~~~~~~~l~s~~~d-g~i~i 274 (540)
.+..|..+|+. +++.+.... .. ......++..++|+..++++.. +.|..
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~r 163 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIAR 163 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEE
Confidence 26789999998 787665432 11 1247899999999988887765 55433
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.77 E-value=0.0032 Score=57.31 Aligned_cols=142 Identities=12% Similarity=0.089 Sum_probs=72.7
Q ss_pred cCCeeEeeeCC-----CeEEEEeCCCCceEE--eeeCCceEEEEEecCCcEEEeecCC-----CeEEEEeccccch--hh
Q psy18231 387 SDHEILTASLD-----CRIRRYDIRTGNLVT--DYVGEPIVDACFTRDCQCILTCSTD-----ECLRLFDKATGEL--LE 452 (540)
Q Consensus 387 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~--~~ 452 (540)
...+++.|+.+ ..+.+||+.+.+-.. .+........+..-++++++.|+.+ ..+.+||..+.+- +.
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 191 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT 191 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCC
Confidence 33455555433 357888887765322 2222111111222377888887754 4588999876532 22
Q ss_pred hhccCcCCcceEEEEecCCCCeEEEeeCC-----CcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-C--
Q psy18231 453 EYKGHKSGDFRIECCLDSKDSQIFCGSSD-----GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-G-- 524 (540)
Q Consensus 453 ~~~~~~~~v~~~~~~~s~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d-- 524 (540)
.+..... ... +...++++++.|+.+ ..+.+||+.+.+-...-..+........+.+ ++++++.|+ +
T Consensus 192 ~~p~~r~--~~~--~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 265 (301)
T 2vpj_A 192 PMATKRS--GAG--VALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGN 265 (301)
T ss_dssp CCSSCCB--SCE--EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred CCCcccc--cce--EEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCC
Confidence 2211111 111 122356777777764 4689999876643222111111111222222 677777777 5
Q ss_pred ---CeeEEEEccc
Q psy18231 525 ---NNVKLWTAEE 534 (540)
Q Consensus 525 ---~~i~iw~~~~ 534 (540)
..+.+||+++
T Consensus 266 ~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 266 SLLSSIECYDPII 278 (301)
T ss_dssp SBEEEEEEEETTT
T ss_pred cccccEEEEcCCC
Confidence 3577888764
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.75 E-value=0.0021 Score=58.56 Aligned_cols=92 Identities=9% Similarity=0.060 Sum_probs=48.7
Q ss_pred CeEEEEeCCCCceEEe--eeCCceEEEEEecCCcEEEeecCC-----CeEEEEeccccc--hhhhhccCcCCcceEEEEe
Q psy18231 398 CRIRRYDIRTGNLVTD--YVGEPIVDACFTRDCQCILTCSTD-----ECLRLFDKATGE--LLEEYKGHKSGDFRIECCL 468 (540)
Q Consensus 398 g~i~iwd~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~ 468 (540)
..+.+||+.+.+-... +........+..-++++++.|+.+ ..+.+||..+.+ .+..+..... ... +.
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~--~~~--~~ 248 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR--NAG--VC 248 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB--SCE--EE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc--cCe--EE
Confidence 3578888887643221 211111111122367888888764 368899987653 2222211111 111 12
Q ss_pred cCCCCeEEEeeCCC-----cEEEEEecCCc
Q psy18231 469 DSKDSQIFCGSSDG-----KIYKWQLVDSS 493 (540)
Q Consensus 469 s~~~~~l~s~s~dg-----~i~iwd~~~~~ 493 (540)
..++++++.|+.++ .+.+||..+.+
T Consensus 249 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 249 AVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 23677778887654 48888877653
No 315
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.75 E-value=0.048 Score=55.04 Aligned_cols=379 Identities=11% Similarity=0.048 Sum_probs=188.2
Q ss_pred hhhhcccccceeeeeccccccee-e--eeecCeEEEEeCCCCCEEEEee--CCCcEEEEcCCCCeeEEEeecCCcceeEE
Q psy18231 138 RILYELPKEWSIRVYRPLTVNRE-L--FVLSGLMHTRFPVDGSYCLTCG--SDKKIKLWNPYRNLLLKTYGGHAHEVNDA 212 (540)
Q Consensus 138 ~~~~~~~~~~~i~~~~~~~~~~~-~--~h~~~v~~v~~spdg~~lat~~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 212 (540)
.+++.-.....|.+.+.....+. + ........+++.|...+|.... ..+.|...++..... ..+-..-.....+
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~Gl 171 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGL 171 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceE
Confidence 34444444455555554332221 1 1234568999998655665544 256777777654433 3332344567899
Q ss_pred EEeeCCCeEEEe-eCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhh
Q psy18231 213 TAACDSSQIASG-ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291 (540)
Q Consensus 213 ~~sp~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 291 (540)
++.+++..|..+ ...+.|...|+..... ..+.........+++.. +..+++-...+.|...|..+++........+
T Consensus 172 alD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~- 248 (628)
T 4a0p_A 172 TIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHL- 248 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSC-
T ss_pred EEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCC-
Confidence 999976666555 4567899999865433 33444445566788865 4455555557888888877665322211100
Q ss_pred HhhhhcCCceeEEEEeecccc-----cccccCceeeE-------EEeeeecccccc-eee-eeeccceeEEEeeccccee
Q psy18231 292 EALKEARDSITSVHSLVKSTK-----NHLSNGLLTKL-------VFAFRCKYLNGL-LSG-VLMSTQHLMVLLDFLGSTQ 357 (540)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 357 (540)
.....+........ .....+..... .+...|...... ... ........+ ++.......
T Consensus 249 -------~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~L-l~s~~~~i~ 320 (628)
T 4a0p_A 249 -------DYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFL-LFSQKSAIN 320 (628)
T ss_dssp -------CSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEE-EEEETTEEE
T ss_pred -------CCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcccccee-eeeccceEE
Confidence 01111111111000 00000000000 011111110000 000 001111122 222111111
Q ss_pred cccccccccccchhhhhhcccccEEEEEecC--CeeEee-eCCCeEEEEeCCCCceEEeeeC--------CceEEEEEec
Q psy18231 358 IGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTA-SLDCRIRRYDIRTGNLVTDYVG--------EPIVDACFTR 426 (540)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~-~~dg~i~iwd~~~~~~~~~~~~--------~~i~~~~~sp 426 (540)
...+.... ........ ..-..+.++++++ +.|+.+ ...+.|+.++++.......+.. .....+++..
T Consensus 321 ~i~l~~~~-~~~~~l~~-~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~ 398 (628)
T 4a0p_A 321 RMVIDEQQ-SPDIILPI-HSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDI 398 (628)
T ss_dssp EECCCTTC-CCCEECCC-TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEET
T ss_pred EEeccccc-CceEEEEe-hhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeec
Confidence 11100000 00000011 1124577888887 444444 4567888888775433222221 3678999998
Q ss_pred CCc-EEEeecCCCeEEEEeccccchhhhhc-cCcCCcceEEEEecCCCCeEEEee-CCC--cEEEEEecCCcceeEEEec
Q psy18231 427 DCQ-CILTCSTDECLRLFDKATGELLEEYK-GHKSGDFRIECCLDSKDSQIFCGS-SDG--KIYKWQLVDSSQISTLIHS 501 (540)
Q Consensus 427 ~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~s~s-~dg--~i~iwd~~~~~~~~~~~~~ 501 (540)
.++ +..+-+..+.|.+.++. |+....+. ........+ ++.|...+|+... ... .|...++ +|+....+..
T Consensus 399 ~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~i--avdp~~g~ly~tD~g~~~~~I~r~~~-dG~~~~~l~~- 473 (628)
T 4a0p_A 399 YSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAV--VVNPEKGYMYFTNLQERSPKIERAAL-DGTEREVLFF- 473 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEE--EEETTTTEEEEEEEETTEEEEEEEET-TSCSCEEEEC-
T ss_pred cCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeE--EEecCCCeEEEeecCCCCCeEEEEeC-CCCCcEEEEe-
Confidence 755 45566678899999875 44333332 222333445 7888444444433 222 4555554 4555555542
Q ss_pred ccceeeeEEEEcCCCcEEEeec--CCeeEEEEcccc
Q psy18231 502 VGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAEED 535 (540)
Q Consensus 502 ~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~~~ 535 (540)
..-...+.|+++++++.|..+. .+.|...+++..
T Consensus 474 ~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~ 509 (628)
T 4a0p_A 474 SGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGA 509 (628)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCC
Confidence 2345679999999887777776 578888887543
No 316
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.73 E-value=0.035 Score=56.01 Aligned_cols=229 Identities=8% Similarity=-0.064 Sum_probs=135.2
Q ss_pred EEEEeeCCCcEEEEcCCCCeeEEEeec-CCcceeEEEEeeCCCeEE-EeeCCCeEEEEEcCCCceeEeccccCCceeEEE
Q psy18231 178 YCLTCGSDKKIKLWNPYRNLLLKTYGG-HAHEVNDATAACDSSQIA-SGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255 (540)
Q Consensus 178 ~lat~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 255 (540)
+|+.+ ....|+..++.+......+.- .-..+..++|++.+..|. +-..++.|..+++........+.........++
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 44443 467899999886654433321 234678999999665555 555678999999865544333333334577888
Q ss_pred ECCCCC-EEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeeccccc
Q psy18231 256 FNEDSS-VVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNG 334 (540)
Q Consensus 256 ~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (540)
+.+.+. +.++-...+.|.+.++.......+
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l------------------------------------------------- 117 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQVL------------------------------------------------- 117 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTCEEE-------------------------------------------------
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcEEEE-------------------------------------------------
Confidence 887544 445555567788888764431000
Q ss_pred ceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeee--CCCeEEEEeCCCCce
Q psy18231 335 LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTAS--LDCRIRRYDIRTGNL 410 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~--~dg~i~iwd~~~~~~ 410 (540)
....-.....|+++| ..|..+. ..+.|...+++....
T Consensus 118 ---------------------------------------~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 118 ---------------------------------------VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp ---------------------------------------ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred ---------------------------------------EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence 001112346777776 4555544 256788888775443
Q ss_pred EEeeeC-CceEEEEEecCCcEEEee-cCCCeEEEEeccccchhhhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEE
Q psy18231 411 VTDYVG-EPIVDACFTRDCQCILTC-STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488 (540)
Q Consensus 411 ~~~~~~-~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd 488 (540)
.....+ .....++++++++.|+.+ ...+.|..+|+..... ..+.........+ ++.. +..+++-...+.|...|
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~gl--av~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGL--TQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEE--EEET-TEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEE--EEEC-CEEEEecCCCCEEEEEE
Confidence 322332 567899999976655554 4578899999865433 2232222222334 4443 34444444578898888
Q ss_pred ecCCcceeEEE
Q psy18231 489 LVDSSQISTLI 499 (540)
Q Consensus 489 ~~~~~~~~~~~ 499 (540)
..+++....+.
T Consensus 235 k~tg~~~~~l~ 245 (628)
T 4a0p_A 235 KTSGQNRTIIQ 245 (628)
T ss_dssp TTTCCSCEEEE
T ss_pred CCCCCceEEEe
Confidence 77776655554
No 317
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.71 E-value=0.02 Score=59.24 Aligned_cols=117 Identities=9% Similarity=-0.044 Sum_probs=73.4
Q ss_pred eecCeEEEEeCCCCCEEE-EeeCCCcEEEEcCCCC----eeEEEeecCCcceeEEEEeeCCC-eEEEeeCCCeEEEEEcC
Q psy18231 163 VLSGLMHTRFPVDGSYCL-TCGSDKKIKLWNPYRN----LLLKTYGGHAHEVNDATAACDSS-QIASGASDKSVILWEVT 236 (540)
Q Consensus 163 h~~~v~~v~~spdg~~la-t~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~ 236 (540)
....+..++|++....|+ +-...+.|+.+++... .....+.........|++.+.+. ++++-...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 456678999998655555 4455678888887642 22333333445677899998665 45555667899999986
Q ss_pred CCceeEeccccCCceeEEEECCCCCEEEEecC--CCcEEEEEecC
Q psy18231 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQ--DNTVMMWDVKS 279 (540)
Q Consensus 237 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~ 279 (540)
.......+.........|++.|.+.+|+.+.. .+.|...++..
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 54433333334456889999997555555432 25677666654
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.70 E-value=0.0063 Score=55.50 Aligned_cols=101 Identities=12% Similarity=0.114 Sum_probs=53.9
Q ss_pred CEEEEeeC--CCcEEEEcCCCCeeEEE--eecCCcceeEEEEeeCCCeEEEeeCC----CeEEEEEcCCCceeEe--ccc
Q psy18231 177 SYCLTCGS--DKKIKLWNPYRNLLLKT--YGGHAHEVNDATAACDSSQIASGASD----KSVILWEVTTGQPVRR--WRE 246 (540)
Q Consensus 177 ~~lat~~~--dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~sp~~~~l~s~s~d----g~i~iwd~~~~~~~~~--~~~ 246 (540)
.+++.|+. ...+.+||..+++-... +......- ++ ..-++..++.|+.+ ..+.+||..+++-... +..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~-~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDA-AC-VFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSC-EE-EEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCccccee-EE-EEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34556654 35788999887653321 11111111 22 22367777888765 6788899887754322 221
Q ss_pred cCCceeEEEECCCCCEEEEecCC------CcEEEEEecCCC
Q psy18231 247 HASKVTCVKFNEDSSVVISGSQD------NTVMMWDVKSRS 281 (540)
Q Consensus 247 h~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~ 281 (540)
....-..+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 1112222222 56677777654 346677766543
No 319
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.65 E-value=0.00014 Score=74.75 Aligned_cols=223 Identities=9% Similarity=0.019 Sum_probs=120.1
Q ss_pred CCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEe-eCCCeEEEEEcCC----CceeEeccccCCceeEEEECCC
Q psy18231 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG-ASDKSVILWEVTT----GQPVRRWREHASKVTCVKFNED 259 (540)
Q Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-s~dg~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~ 259 (540)
.+.|+..++.+.+....+.. ...+..++|.+.+..|+.+ ...+.|..+++.. ......+.........+++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 46788888876655444332 3456789999876666655 4567899999865 2222222222234566788754
Q ss_pred -CCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceee
Q psy18231 260 -SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSG 338 (540)
Q Consensus 260 -~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (540)
++++++-...+.|.++++.......+.
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~---------------------------------------------------- 491 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLF---------------------------------------------------- 491 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEEC----------------------------------------------------
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEE----------------------------------------------------
Confidence 444455455677888876543310000
Q ss_pred eeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeeeC--CCeEEEEeCCCCceEEee
Q psy18231 339 VLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTASL--DCRIRRYDIRTGNLVTDY 414 (540)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~~--dg~i~iwd~~~~~~~~~~ 414 (540)
.........|+++| ..|+.+.. .+.|..+++........+
T Consensus 492 ------------------------------------~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~ 535 (699)
T 1n7d_A 492 ------------------------------------REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 535 (699)
T ss_dssp ------------------------------------CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES
T ss_pred ------------------------------------eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE
Confidence 00001223455555 33433332 266777776533221111
Q ss_pred e--CCceEEEEEecCCcEE-EeecCCCeEEEEeccccchhhhhcc--CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEe
Q psy18231 415 V--GEPIVDACFTRDCQCI-LTCSTDECLRLFDKATGELLEEYKG--HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489 (540)
Q Consensus 415 ~--~~~i~~~~~sp~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~ 489 (540)
. ......++|+|++..| ++-+..+.|..+|+........+.. .......+ ++..+ .++++....+.|..++.
T Consensus 536 ~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gl--avd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 536 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSL--AVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCC--EEETT-EEEEECSTTTCEEEEET
T ss_pred eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEe--EEECC-EEEEEeCCCCeEEEEEc
Confidence 1 2356789999875544 4555678899999864322211111 11112233 34333 44555566788999998
Q ss_pred cCCcceeEEE
Q psy18231 490 VDSSQISTLI 499 (540)
Q Consensus 490 ~~~~~~~~~~ 499 (540)
.+++.+..+.
T Consensus 613 ~~G~~~~~i~ 622 (699)
T 1n7d_A 613 LTGSDVNLLA 622 (699)
T ss_dssp TTEEEEECCC
T ss_pred cCCCceEEee
Confidence 7787766664
No 320
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.65 E-value=0.003 Score=56.95 Aligned_cols=151 Identities=8% Similarity=0.073 Sum_probs=101.4
Q ss_pred EEEEecC--CeeEeee-CCCeEEEEeCCCCceEEe-eeC--------CceEEEEE---ecCCcEEEeec-----------
Q psy18231 382 TSVHVSD--HEILTAS-LDCRIRRYDIRTGNLVTD-YVG--------EPIVDACF---TRDCQCILTCS----------- 435 (540)
Q Consensus 382 ~~l~~~~--~~l~~~~-~dg~i~iwd~~~~~~~~~-~~~--------~~i~~~~~---sp~~~~l~~~~----------- 435 (540)
.++.|++ ..+..++ ..++|..||...+..... +.+ ..+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4678876 6666666 789999999986543322 222 13678999 68888887643
Q ss_pred --CCCeEEEEecc---ccchhhhhc--cCc---------CCcceEEEEecCCCCeEEEeeCC-CcEEEEEecCCcceeEE
Q psy18231 436 --TDECLRLFDKA---TGELLEEYK--GHK---------SGDFRIECCLDSKDSQIFCGSSD-GKIYKWQLVDSSQISTL 498 (540)
Q Consensus 436 --~dg~i~i~d~~---~~~~~~~~~--~~~---------~~v~~~~~~~s~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~ 498 (540)
.+..|..||+. +++.+.... ... ..-....++..++|+..++++.- +.|...+. +++.+..+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p-dG~~~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA-DGKTVSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT-TSCCEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC-CCCEEeee
Confidence 26789999998 776653222 100 11123445899999999988888 87776663 44444433
Q ss_pred Eec----ccceeeeEEEEcCCCcEEEeec-CCeeEEEEcc
Q psy18231 499 IHS----VGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 499 ~~~----~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
... ......+.++++|+|+.|++.. ++.|.-+|+.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 211 1122367999999999999988 9999999865
No 321
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.64 E-value=0.04 Score=51.26 Aligned_cols=102 Identities=13% Similarity=0.058 Sum_probs=60.5
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe-eEEEee---cCCcceeEEEEeeC---CCeEEEeeC----C----Ce
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYG---GHAHEVNDATAACD---SSQIASGAS----D----KS 229 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~-~~~~~~---~h~~~v~~l~~sp~---~~~l~s~s~----d----g~ 229 (540)
.....++|.|||++ +++..+|.|++++ .+++ .+..+. ........++++|+ +..|..+.. + +.
T Consensus 29 ~~P~~ia~~pdG~l-~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRY-LVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEE-EEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeE-EEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 45678999999985 4456679999997 4554 222221 12356789999997 444444332 3 56
Q ss_pred EEEEEcCCC--c-----ee-Eecc-ccCCceeEEEECCCCCEEEEecC
Q psy18231 230 VILWEVTTG--Q-----PV-RRWR-EHASKVTCVKFNEDSSVVISGSQ 268 (540)
Q Consensus 230 i~iwd~~~~--~-----~~-~~~~-~h~~~v~~~~~~~~~~~l~s~~~ 268 (540)
|..|+...+ . .+ ..+. ........++|.|||.+.++.+.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 777776544 1 11 1122 11123467888888876666443
No 322
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.63 E-value=0.07 Score=53.75 Aligned_cols=117 Identities=6% Similarity=-0.122 Sum_probs=73.9
Q ss_pred cCeEEEEeCCCCCEEE-EeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeC--CCeEEEEEcCCCcee
Q psy18231 165 SGLMHTRFPVDGSYCL-TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS--DKSVILWEVTTGQPV 241 (540)
Q Consensus 165 ~~v~~v~~spdg~~la-t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~--dg~i~iwd~~~~~~~ 241 (540)
.....+++.+.++.|+ +-...+.|.+.++........+...-.....|++.|.+.+|+.+.. .+.|...++......
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 4678899999666555 4455789999998654333333334456778999997665555443 356766676433222
Q ss_pred EeccccCCceeEEEECCCCCEEEEe-cCCCcEEEEEecCCC
Q psy18231 242 RRWREHASKVTCVKFNEDSSVVISG-SQDNTVMMWDVKSRS 281 (540)
Q Consensus 242 ~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~ 281 (540)
......-.....+++++++..|+.+ ...+.|...|+....
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~ 204 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 204 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc
Confidence 2232334567899999876655554 445678888876543
No 323
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=97.58 E-value=4.4e-05 Score=70.14 Aligned_cols=97 Identities=14% Similarity=0.228 Sum_probs=67.7
Q ss_pred cceecCCceEEec-cCCCCCHHHHHHHHHcCCCEEEee---------------------eeecccccccchhhc-c-ccc
Q psy18231 10 RSTLLKNLKHCDS-TLWTSKLNFRQLVRSHNVDLCFTP---------------------MIIADSFIKSSKARN-N-EFS 65 (540)
Q Consensus 10 ~~~~~~~~~~~ap-~~~~~~~~~r~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~-~-~~~ 65 (540)
.++.+++|+++|| |.+.+. +|++.+.+.|++...++ |+++-.+.+...... . .+.
T Consensus 12 ~g~~l~npi~~aag~~~~~~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~~~~~~~~~~~~~~ 90 (311)
T 1ep3_A 12 PGLDLKNPIIPASGCFGFGE-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIMTEKLP 90 (311)
T ss_dssp TTEEESSSEEECTTSSTTST-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCCBCCHHHHHHTHHH
T ss_pred CCEECCCCcEECCCCCCCCH-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCCCcCHHHHHHHHHH
Confidence 3678899999999 999875 67777644554445433 444444433332221 1 111
Q ss_pred -c-C-CCCCCEEEEEecCChhHHHHHHHHhc--CCCCeEeeccCCCc
Q psy18231 66 -T-S-PEDTPLVVQFASNNHDDFVRATQYVA--PHCNGVDLNCGCPQ 107 (540)
Q Consensus 66 -~-~-~~~~~~~~q~~~~~~~~~~~~~~~~~--~~~~~id~~~gc~~ 107 (540)
. . ..+.|+++|+.+.+++++.++++.+. .++|.|++|.+||.
T Consensus 91 ~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~ 137 (311)
T 1ep3_A 91 WLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPN 137 (311)
T ss_dssp HHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEE
T ss_pred HHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCC
Confidence 1 1 22789999999999999999999877 68999999999997
No 324
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.56 E-value=0.00016 Score=66.95 Aligned_cols=95 Identities=12% Similarity=0.067 Sum_probs=70.4
Q ss_pred ceecCCceEEeccCCCCCHH-HHHHHHHcCCCEEEeeeeecccccccch------------------------hhccccc
Q psy18231 11 STLLKNLKHCDSTLWTSKLN-FRQLVRSHNVDLCFTPMIIADSFIKSSK------------------------ARNNEFS 65 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~ 65 (540)
++.+++++++|+ |+++.+ |++.+++.|++++.+++++......+.. .....+.
T Consensus 51 g~~l~npi~~aa--g~~~~~~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~ 128 (336)
T 1f76_A 51 GLTFKNPLGLAA--GLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVK 128 (336)
T ss_dssp TEEESSSEEECT--TSSTTCCCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHH
T ss_pred CEEcCCCcEeCc--ccCCcHHHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHH
Confidence 567899999995 467766 9999999999999999998653211100 0011111
Q ss_pred cCCCCCCEEEEEecCC-------hhHHHHHHHHhcCCCCeEeeccCCCc
Q psy18231 66 TSPEDTPLVVQFASNN-------HDDFVRATQYVAPHCNGVDLNCGCPQ 107 (540)
Q Consensus 66 ~~~~~~~~~~q~~~~~-------~~~~~~~~~~~~~~~~~id~~~gc~~ 107 (540)
....+.|+++|+.++. ++++.++++.+.++.|.|++|++||.
T Consensus 129 ~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~ 177 (336)
T 1f76_A 129 KAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPN 177 (336)
T ss_dssp HCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSS
T ss_pred hcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCC
Confidence 1123468999999988 88999999877778999999999996
No 325
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=97.55 E-value=5.1e-05 Score=69.99 Aligned_cols=90 Identities=11% Similarity=0.087 Sum_probs=60.9
Q ss_pred ceecCCceEEeccCCCCCH------HHHHHHHHcCCCEEEeeeeecccccc-cchhhccccccCCCCCCEE-----EEEe
Q psy18231 11 STLLKNLKHCDSTLWTSKL------NFRQLVRSHNVDLCFTPMIIADSFIK-SSKARNNEFSTSPEDTPLV-----VQFA 78 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~------~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~q~~ 78 (540)
+..+++++++|||++.++. ++|++|+++|+.+.+++|.++ +.+ +.+...+ +...+.+.|++ .|+.
T Consensus 54 g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~--le~~~~~~~~q-l~~~~~d~pv~~~~~~~q~~ 130 (332)
T 1vcf_A 54 GKTLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRIL--LERPEALRSFR-VRKVAPKALLIANLGLAQLR 130 (332)
T ss_dssp TEEESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHHH--HHCTTTHHHHC-CTTTCSSSCEEEEEEGGGGG
T ss_pred CcccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchhc--ccCCCccceEE-eeccCCCceeecccChhhhh
Confidence 3456889999999998864 999999999999999999775 222 1222222 22223467775 6778
Q ss_pred cCChhHHHHHHHHhcCCCCeEeecc
Q psy18231 79 SNNHDDFVRATQYVAPHCNGVDLNC 103 (540)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~id~~~ 103 (540)
+.+++.+.++++....+...+++|+
T Consensus 131 ~~~~~~~~~a~~~~~~~a~~i~~n~ 155 (332)
T 1vcf_A 131 RYGRDDLLRLVEMLEADALAFHVNP 155 (332)
T ss_dssp TCCHHHHHHHHHHHTCSEEEEECCH
T ss_pred ccChHHHHHHHhhcCCCceeeccch
Confidence 8889999998887644334566664
No 326
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=97.54 E-value=0.00013 Score=70.88 Aligned_cols=88 Identities=7% Similarity=-0.005 Sum_probs=67.4
Q ss_pred ceecCCceEEeccCC---C----CCHHHHHHHHH--cCCCEEEeeeeec-ccccccchhhccccccC-CCCCCEEEEEe-
Q psy18231 11 STLLKNLKHCDSTLW---T----SKLNFRQLVRS--HNVDLCFTPMIIA-DSFIKSSKARNNEFSTS-PEDTPLVVQFA- 78 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~---~----~~~~~r~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~q~~- 78 (540)
+..+++++++|||++ . +++++|++|++ +|+.+++++|.+. .+.+.. .. +.+.|..+|++
T Consensus 185 G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~---------~~~~~~~~~~~QLy~ 255 (511)
T 1kbi_A 185 GSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIE---------AAPSDKQIQWYQLYV 255 (511)
T ss_dssp TEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHH---------TCCCSSCCEEEEECC
T ss_pred CccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHh---------hcCCCCCCeEEEEee
Confidence 445688999999997 4 58999999999 9999999999332 222211 12 34578999998
Q ss_pred cCChhHHHHHHHHhcC-CCCeEeeccCCCc
Q psy18231 79 SNNHDDFVRATQYVAP-HCNGVDLNCGCPQ 107 (540)
Q Consensus 79 ~~~~~~~~~~~~~~~~-~~~~id~~~gc~~ 107 (540)
+.+++.+.++++.... +++.|.++.+||+
T Consensus 256 ~~d~~~~~~~~~rae~aG~~al~itvd~p~ 285 (511)
T 1kbi_A 256 NSDRKITDDLVKNVEKLGVKALFVTVDAPS 285 (511)
T ss_dssp CSSHHHHHHHHHHHHHHTCSCEEEECSCSS
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCCC
Confidence 8889988888877665 8888888888887
No 327
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.53 E-value=0.00049 Score=70.64 Aligned_cols=115 Identities=10% Similarity=-0.025 Sum_probs=67.9
Q ss_pred ecCeEEEEeCCCCCEEEEee-CCCcEEEEcCCC----CeeEEEeecCCcceeEEEEeeC-CCeEEEeeCCCeEEEEEcCC
Q psy18231 164 LSGLMHTRFPVDGSYCLTCG-SDKKIKLWNPYR----NLLLKTYGGHAHEVNDATAACD-SSQIASGASDKSVILWEVTT 237 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~-~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~sp~-~~~l~s~s~dg~i~iwd~~~ 237 (540)
...+..++|++++..|+.+. ..+.|..+++.. ......+.........|++.+. ++++++-...+.|.+.++..
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence 35677899998777766553 467898988765 2222222211233566888754 44555556678999999865
Q ss_pred CceeEeccccCCceeEEEECCCCCEEEEecC--CCcEEEEEec
Q psy18231 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQ--DNTVMMWDVK 278 (540)
Q Consensus 238 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~ 278 (540)
......+.........++++|.+.+|+.+.. .+.|..+++.
T Consensus 485 ~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 485 VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 5443333333345678888886555554432 2456555543
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.47 E-value=0.014 Score=53.19 Aligned_cols=102 Identities=10% Similarity=0.047 Sum_probs=53.4
Q ss_pred cCCeeEeeeCC-----CeEEEEeCCCCceEEe--eeCCc-eEEEEEecCCcEEEeecCC-----CeEEEEeccccch--h
Q psy18231 387 SDHEILTASLD-----CRIRRYDIRTGNLVTD--YVGEP-IVDACFTRDCQCILTCSTD-----ECLRLFDKATGEL--L 451 (540)
Q Consensus 387 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~-i~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~--~ 451 (540)
...+++.|+.+ ..+.+||+.+.+-... +.... -.+++. -++++++.|+.+ ..+.+||+.+.+- +
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 246 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFV 246 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence 33555555543 4578888876643221 11111 112222 277888888764 5689999876532 2
Q ss_pred hhhccCcCCcceEEEEecCCCCeEEEeeCC-----CcEEEEEecCCc
Q psy18231 452 EEYKGHKSGDFRIECCLDSKDSQIFCGSSD-----GKIYKWQLVDSS 493 (540)
Q Consensus 452 ~~~~~~~~~v~~~~~~~s~~~~~l~s~s~d-----g~i~iwd~~~~~ 493 (540)
..+..... ...++. -++++++.|+.+ ..+.+||+.+.+
T Consensus 247 ~~~p~~r~---~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 247 APMKHRRS---ALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CCCSSCCB---SCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCCcc---ceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 22211111 111122 356777777754 357788876654
No 329
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.0075 Score=58.22 Aligned_cols=151 Identities=11% Similarity=0.146 Sum_probs=93.1
Q ss_pred cEEEEEecC---CeeEee-eCCCeEEEEeCCCCceEEeeeC-----CceEEEEE-------ecCCcEEEeecCCC-----
Q psy18231 380 SITSVHVSD---HEILTA-SLDCRIRRYDIRTGNLVTDYVG-----EPIVDACF-------TRDCQCILTCSTDE----- 438 (540)
Q Consensus 380 ~v~~l~~~~---~~l~~~-~~dg~i~iwd~~~~~~~~~~~~-----~~i~~~~~-------sp~~~~l~~~~~dg----- 438 (540)
....|+++| ..|+++ ...+.|++.|++++........ .....++| +++|+.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 456788886 344444 4457799999988776654433 24899999 99999666665543
Q ss_pred --eEEEEeccc-cchh-----hhhccCcCCcceEEEEecCCCCe-EEEeeCCCcEEEEEec-------CCcc--------
Q psy18231 439 --CLRLFDKAT-GELL-----EEYKGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLV-------DSSQ-------- 494 (540)
Q Consensus 439 --~i~i~d~~~-~~~~-----~~~~~~~~~v~~~~~~~s~~~~~-l~s~s~dg~i~iwd~~-------~~~~-------- 494 (540)
.|.+++... ++.. ..+..... ...+ +.+|++.. +++-..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~-p~gi--avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQ-CNGA--TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESC-CCCE--EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeeccCCC-ceEE--EEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 366665333 2221 11211111 2234 68885555 5556677889999987 5553
Q ss_pred ---eeEEEecccceeeeEEEEcCCCcEEEeec--CCeeEEEEcc
Q psy18231 495 ---ISTLIHSVGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAE 533 (540)
Q Consensus 495 ---~~~~~~~~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~ 533 (540)
...+...........++|+|+|++|..+. .+.|+.++..
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 22322112334568999999999655554 7788886654
No 330
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.47 E-value=0.00013 Score=78.19 Aligned_cols=112 Identities=17% Similarity=0.168 Sum_probs=77.0
Q ss_pred ceecCCceEEeccCCCCCHHHHHHHHHcCCCEEEeeeeeccccc--ccchhh----------------------------
Q psy18231 11 STLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFI--KSSKAR---------------------------- 60 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------------------------- 60 (540)
++.+++++++|||.+.++.++++.+.+.|.+.+.+..+....-. +..+..
T Consensus 539 G~~~~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~~~~~ 618 (1025)
T 1gte_A 539 GLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTA 618 (1025)
T ss_dssp TEEESSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSCSSCH
T ss_pred cccccCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccccchhH
Confidence 45678999999999999999999999999999987766643211 100000
Q ss_pred ------ccccccCCCCCCEEEEE-ecCChhHHHHHHHHhc-CCCCeEeeccCCCceEEEeccccceecccc
Q psy18231 61 ------NNEFSTSPEDTPLVVQF-ASNNHDDFVRATQYVA-PHCNGVDLNCGCPQRWAIKEGYGCALLSKQ 123 (540)
Q Consensus 61 ------~~~~~~~~~~~~~~~q~-~~~~~~~~~~~~~~~~-~~~~~id~~~gc~~~~~~~~g~g~~l~~~~ 123 (540)
...+.....+.|+++++ .+.+++++.++++.+. .++|.|++|.+||.. ....+.|++++.++
T Consensus 619 ~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~~~G~~~~~~~ 688 (1025)
T 1gte_A 619 AYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGERGMGLACGQDP 688 (1025)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC-----SBGGGCH
T ss_pred HHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCCCcccccccCH
Confidence 00011112256777766 6889999999999874 589999999999987 44566788887763
No 331
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.46 E-value=0.0053 Score=55.87 Aligned_cols=142 Identities=10% Similarity=0.092 Sum_probs=71.4
Q ss_pred cCCeeEeeeCCC-----eEEEEeCCCCceEEe--eeCCc-eEEEEEecCCcEEEeecCC-------CeEEEEeccccc--
Q psy18231 387 SDHEILTASLDC-----RIRRYDIRTGNLVTD--YVGEP-IVDACFTRDCQCILTCSTD-------ECLRLFDKATGE-- 449 (540)
Q Consensus 387 ~~~~l~~~~~dg-----~i~iwd~~~~~~~~~--~~~~~-i~~~~~sp~~~~l~~~~~d-------g~i~i~d~~~~~-- 449 (540)
....++.|+.++ .+.+||+.+.+-... +.... -.+++ .-++++++.|+.+ ..+.+||..+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 345555555442 477888876653222 11111 11222 2367777777642 358899987653
Q ss_pred hhhhhccCcCCcceEEEEecCCCCeEEEeeCC-----CcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-
Q psy18231 450 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD-----GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC- 523 (540)
Q Consensus 450 ~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~- 523 (540)
.+..+....... .. + ..++++++.|+.+ ..+.+||..+.+-...-..+........+. -++++++.|+
T Consensus 187 ~~~~~p~~r~~~-~~--~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~ 260 (302)
T 2xn4_A 187 YIAEMSTRRSGA-GV--G-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGD 260 (302)
T ss_dssp EECCCSSCCBSC-EE--E-EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCB
T ss_pred ECCCCccccccc-cE--E-EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCc
Confidence 222221111111 11 2 2356777888764 368899987654322111101111111222 2677777777
Q ss_pred CC-----eeEEEEcccc
Q psy18231 524 GN-----NVKLWTAEED 535 (540)
Q Consensus 524 d~-----~i~iw~~~~~ 535 (540)
++ .+.+||++++
T Consensus 261 ~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 261 DGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CSSSBCCCEEEEETTTT
T ss_pred CCCcccccEEEEcCCCC
Confidence 53 4788887643
No 332
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.46 E-value=0.00026 Score=72.65 Aligned_cols=98 Identities=8% Similarity=-0.113 Sum_probs=68.7
Q ss_pred cceecCCceEEeccCCCCCHH-------HHHHHHHcCCCEEEeeeeecccccccchhhc-cccc-------------cCC
Q psy18231 10 RSTLLKNLKHCDSTLWTSKLN-------FRQLVRSHNVDLCFTPMIIADSFIKSSKARN-NEFS-------------TSP 68 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~~~-------~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------~~~ 68 (540)
+++.+++|+++|||.+.+..+ ||...++.|+++.+||++.....-+..+... .... .++
T Consensus 21 g~~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~ 100 (690)
T 3k30_A 21 GPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHE 100 (690)
T ss_dssp TTEECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHH
T ss_pred CCEEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHh
Confidence 468899999999999776543 6767777899999999987654433222211 1110 135
Q ss_pred CCCCEEEEEecCC-----------------------------------------hhHHHHHHHHhcC-CCCeEeeccCCC
Q psy18231 69 EDTPLVVQFASNN-----------------------------------------HDDFVRATQYVAP-HCNGVDLNCGCP 106 (540)
Q Consensus 69 ~~~~~~~q~~~~~-----------------------------------------~~~~~~~~~~~~~-~~~~id~~~gc~ 106 (540)
.+.++++|++... .+++++||+...+ +.|+|+++++|.
T Consensus 101 ~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~g 180 (690)
T 3k30_A 101 GGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHG 180 (690)
T ss_dssp TTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTT
T ss_pred cCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccc
Confidence 6778999999310 1677888886555 999999999877
Q ss_pred c
Q psy18231 107 Q 107 (540)
Q Consensus 107 ~ 107 (540)
.
T Consensus 181 y 181 (690)
T 3k30_A 181 Y 181 (690)
T ss_dssp C
T ss_pred c
Confidence 6
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.41 E-value=0.0098 Score=54.19 Aligned_cols=143 Identities=11% Similarity=0.048 Sum_probs=72.2
Q ss_pred cCCeeEeeeCC------CeEEEEeCCCCceEEe--eeCCceEEEEEecCCcEEEeecC---------CCeEEEEeccccc
Q psy18231 387 SDHEILTASLD------CRIRRYDIRTGNLVTD--YVGEPIVDACFTRDCQCILTCST---------DECLRLFDKATGE 449 (540)
Q Consensus 387 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~---------dg~i~i~d~~~~~ 449 (540)
...+++.|+.+ ..+.+||..+.+-... +........+..-++++++.|+. -..+.+||..+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 34555566544 4588889887653222 11111111112236777777764 3458899987653
Q ss_pred --hhhhhccCcCCcceEEEEecCCCCeEEEeeCC-----CcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEee
Q psy18231 450 --LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD-----GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522 (540)
Q Consensus 450 --~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 522 (540)
.+..+.. +.....++. -++++++.|+.+ ..+.+||+.+.+-...-..+........+.+ ++++++.|
T Consensus 181 W~~~~~~p~---~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 254 (306)
T 3ii7_A 181 WTELCPMIE---ARKNHGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLA 254 (306)
T ss_dssp EEEECCCSS---CCBSCEEEE-ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEE
T ss_pred EEECCCccc---hhhcceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEe
Confidence 2222211 111111122 266777777654 3588899876532211111011122223333 67777777
Q ss_pred c-C-----CeeEEEEcccc
Q psy18231 523 C-G-----NNVKLWTAEED 535 (540)
Q Consensus 523 ~-d-----~~i~iw~~~~~ 535 (540)
+ + ..+.+||++++
T Consensus 255 G~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 255 GFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp CBCSSSBCCEEEEEETTTT
T ss_pred CcCCCeeeeeEEEEcCCCC
Confidence 7 5 35778887653
No 334
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=97.38 E-value=0.00018 Score=66.36 Aligned_cols=91 Identities=9% Similarity=-0.007 Sum_probs=66.3
Q ss_pred ceecCCceEEeccCCCCCHHHHHHHHHcCC-CEEEeeeeecccccccchhhccccccCCCCCCEEEEEecCChhHHHHHH
Q psy18231 11 STLLKNLKHCDSTLWTSKLNFRQLVRSHNV-DLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFVRAT 89 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~ 89 (540)
-+.++.++++|||.|+++..++..+.+.|+ ++..+++++..++.+.-+..... .+.|+.+|++..+++. .+.+
T Consensus 8 ~l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~-----~~~p~gvnl~~~~~~~-~~~~ 81 (332)
T 2z6i_A 8 LLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSL-----TDKPFGVNIMLLSPFV-EDIV 81 (332)
T ss_dssp HHTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHH-----CCSCEEEEECTTSTTH-HHHH
T ss_pred HhCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-----cCCCEEEEecCCCCCH-HHHH
Confidence 344788999999999999999999999986 88888887766553322222111 2478999999876652 3333
Q ss_pred H-HhcCCCCeEeeccCCCc
Q psy18231 90 Q-YVAPHCNGVDLNCGCPQ 107 (540)
Q Consensus 90 ~-~~~~~~~~id~~~gc~~ 107 (540)
+ ....+.+.|.++.|+|.
T Consensus 82 ~~a~~~g~d~V~~~~g~p~ 100 (332)
T 2z6i_A 82 DLVIEEGVKVVTTGAGNPS 100 (332)
T ss_dssp HHHHHTTCSEEEECSSCGG
T ss_pred HHHHHCCCCEEEECCCChH
Confidence 3 34568899999999874
No 335
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=97.36 E-value=0.00042 Score=63.44 Aligned_cols=105 Identities=11% Similarity=0.071 Sum_probs=75.6
Q ss_pred ceecCCceEEeccCCC--CCHHHHHHHHHcCCCEEEeeeeecccccccchhhccc----------------------c-c
Q psy18231 11 STLLKNLKHCDSTLWT--SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNE----------------------F-S 65 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~-~ 65 (540)
++.+++++.+| +|. .+..+.+.+...|++.+.+..++......+.+-+..+ + +
T Consensus 44 Gl~~~NPv~lA--aG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~ 121 (345)
T 3oix_A 44 SFDFDNCLMNA--AGVYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDYVTE 121 (345)
T ss_dssp TEEESCSEEEC--TTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHHHHH
T ss_pred CEECCCCCEEc--CCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHHHHH
Confidence 56789999999 666 4778888899999999998888876432211111111 1 1
Q ss_pred --cCCCCCCEEEEEecCChhHHHHHHHHhcC-CC-CeEeeccCCCceEEEeccccceeccc
Q psy18231 66 --TSPEDTPLVVQFASNNHDDFVRATQYVAP-HC-NGVDLNCGCPQRWAIKEGYGCALLSK 122 (540)
Q Consensus 66 --~~~~~~~~~~q~~~~~~~~~~~~~~~~~~-~~-~~id~~~gc~~~~~~~~g~g~~l~~~ 122 (540)
....+.|+++|+.|.++++++++++.+++ ++ +.|++|++||... | +..|+.+
T Consensus 122 ~~~~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~----G-~~~l~~~ 177 (345)
T 3oix_A 122 LQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP----G-XPQIAYD 177 (345)
T ss_dssp HHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST----T-CCCGGGC
T ss_pred HhhccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC----C-chhhcCC
Confidence 02457899999999999999999998863 44 4999999999864 3 4556555
No 336
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.35 E-value=0.00023 Score=73.39 Aligned_cols=112 Identities=10% Similarity=-0.052 Sum_probs=73.1
Q ss_pred cceecCCceEEeccCCCC--CHHH------HHHHHHcCCCEEEeeeeecccccccch---------h---hcccc--ccC
Q psy18231 10 RSTLLKNLKHCDSTLWTS--KLNF------RQLVRSHNVDLCFTPMIIADSFIKSSK---------A---RNNEF--STS 67 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~--~~~~------r~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~--~~~ 67 (540)
+++.|++|+++|||.+.. +.|. ++.+ +.|+++.+||++.....-...+ . ..+.+ ..+
T Consensus 16 g~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra-~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh 94 (729)
T 1o94_A 16 GPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKA-EGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVH 94 (729)
T ss_dssp TTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHH-HTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHH
T ss_pred CCEEECCccEECCCcCCcCCCCcHHHHHHHHHHh-cCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHH
Confidence 468899999999998853 4563 3333 4589999999987653221111 1 11111 125
Q ss_pred CCCCCEEEEEecCC---------------------------------------hhHHHHHHHHhc-CCCCeEeeccCC--
Q psy18231 68 PEDTPLVVQFASNN---------------------------------------HDDFVRATQYVA-PHCNGVDLNCGC-- 105 (540)
Q Consensus 68 ~~~~~~~~q~~~~~---------------------------------------~~~~~~~~~~~~-~~~~~id~~~gc-- 105 (540)
..+.++++|++... .+++++||+... .+.|.|++|++|
T Consensus 95 ~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gy 174 (729)
T 1o94_A 95 KYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSY 174 (729)
T ss_dssp TTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTC
T ss_pred hCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccch
Confidence 67889999998831 257888887644 599999999999
Q ss_pred -------CceEEEeccccceeccc
Q psy18231 106 -------PQRWAIKEGYGCALLSK 122 (540)
Q Consensus 106 -------~~~~~~~~g~g~~l~~~ 122 (540)
|..-...+.+|..+..+
T Consensus 175 Ll~qFlsp~~N~R~D~yGGs~enR 198 (729)
T 1o94_A 175 LPLQFLNPYYNKRTDKYGGSLENR 198 (729)
T ss_dssp HHHHHHCTTTCCCCSTTSSSHHHH
T ss_pred HHHHhcCCccCCCcCcCCCCHHHH
Confidence 54444444555555443
No 337
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=97.33 E-value=0.00061 Score=64.47 Aligned_cols=98 Identities=10% Similarity=0.056 Sum_probs=72.1
Q ss_pred cceecCCceEEeccCCCCCHHHHHHHHHcCCCEEEeeeeecccccccchhhcc------------------------ccc
Q psy18231 10 RSTLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNN------------------------EFS 65 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~ 65 (540)
.++.+++++.+|++..=....+|.+ .+.|++.+.+++++.+...-+.+-+.. .+.
T Consensus 87 ~Gl~~~NPvglAAG~dk~~~~~~~l-~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~~~~l~ 165 (443)
T 1tv5_A 87 KHLDFINPFGVAAGFDKNGVCIDSI-LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLI 165 (443)
T ss_dssp TTEEESSSEEECTTTTTTCSSHHHH-HTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHH
T ss_pred CCEEeCCCcEECCcccCccHHHHHH-HhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHHHHHHHH
Confidence 4678899999998776555688885 778999999999997643221110100 000
Q ss_pred c-CC--------CCCCEEEEEecCC-----hhHHHHHHHHhcCCCCeEeeccCCCce
Q psy18231 66 T-SP--------EDTPLVVQFASNN-----HDDFVRATQYVAPHCNGVDLNCGCPQR 108 (540)
Q Consensus 66 ~-~~--------~~~~~~~q~~~~~-----~~~~~~~~~~~~~~~~~id~~~gc~~~ 108 (540)
. .. ...|+++|+.++. +++++++++.+.+++|.|++|.+||..
T Consensus 166 ~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt 222 (443)
T 1tv5_A 166 LFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNT 222 (443)
T ss_dssp HHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTS
T ss_pred HHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCC
Confidence 0 00 1457999999998 889999999988899999999999975
No 338
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.27 E-value=0.016 Score=52.99 Aligned_cols=61 Identities=5% Similarity=0.071 Sum_probs=34.7
Q ss_pred EEEEeeCCCcEEEEcCCCCeeEE-EeecCCcceeEEEEeeCCCeEEEeeC-----C------CeEEEEEcCCCce
Q psy18231 178 YCLTCGSDKKIKLWNPYRNLLLK-TYGGHAHEVNDATAACDSSQIASGAS-----D------KSVILWEVTTGQP 240 (540)
Q Consensus 178 ~lat~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~sp~~~~l~s~s~-----d------g~i~iwd~~~~~~ 240 (540)
+++.|+ ..+.+||+.+++-.. .+..............++..++.|+. . ..+.+||..+++-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 344555 578899998876432 22211122233333447778888873 1 1277888877654
No 339
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=97.24 E-value=0.00032 Score=64.88 Aligned_cols=90 Identities=13% Similarity=0.109 Sum_probs=64.1
Q ss_pred ceecCCceEEeccCCCCCHHH------HHHHHHcCCCEEEeeeeec--ccccccchhhccccccCCCCCCEEE-----EE
Q psy18231 11 STLLKNLKHCDSTLWTSKLNF------RQLVRSHNVDLCFTPMIIA--DSFIKSSKARNNEFSTSPEDTPLVV-----QF 77 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~~------r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----q~ 77 (540)
+..++.|+++|||+|.|+.|+ |++|+++|+.+.+++|..+ +..+.......+. ..| +.|++. |+
T Consensus 55 g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr~--~ap-~~~~~anlg~~ql 131 (368)
T 3vkj_A 55 RKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRK--VAP-TIPIIANLGMPQL 131 (368)
T ss_dssp TEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHHH--HCS-SSCEEEEEEGGGG
T ss_pred CEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHHH--hCc-CcceecCcCeeec
Confidence 566788999999999999995 9999999999999999544 2222222211121 123 345543 55
Q ss_pred ec-CChhHHHHHHHHhcCCCCeEeecc
Q psy18231 78 AS-NNHDDFVRATQYVAPHCNGVDLNC 103 (540)
Q Consensus 78 ~~-~~~~~~~~~~~~~~~~~~~id~~~ 103 (540)
.+ .+++.+.++++++..+...|++|.
T Consensus 132 ~~~~~~~~~~~av~~~~a~al~Ihln~ 158 (368)
T 3vkj_A 132 VKGYGLKEFQDAIQMIEADAIAVHLNP 158 (368)
T ss_dssp GTTCCHHHHHHHHHHTTCSEEEEECCH
T ss_pred CCCCCHHHHHHHHHHhcCCCeEEEecc
Confidence 55 778999999998866777788774
No 340
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.24 E-value=0.019 Score=52.38 Aligned_cols=142 Identities=9% Similarity=0.122 Sum_probs=71.0
Q ss_pred cCCeeEeeeCC-----CeEEEEeCCCCceEEe--eeCCc-eEEEEEecCCcEEEeecCC-----CeEEEEeccccch--h
Q psy18231 387 SDHEILTASLD-----CRIRRYDIRTGNLVTD--YVGEP-IVDACFTRDCQCILTCSTD-----ECLRLFDKATGEL--L 451 (540)
Q Consensus 387 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~-i~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~--~ 451 (540)
...+++.|+.+ ..+.+||+.+.+-... +.... -.+++. -++++++.|+.+ ..+.+||..+.+- +
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 199 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV-LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMI 199 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEC
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE-ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC
Confidence 33445555432 3578888877653221 11111 112222 267777877754 4588999876532 2
Q ss_pred hhhccCcCCcceEEEEecCCCCeEEEeeCC-----CcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CC
Q psy18231 452 EEYKGHKSGDFRIECCLDSKDSQIFCGSSD-----GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GN 525 (540)
Q Consensus 452 ~~~~~~~~~v~~~~~~~s~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~ 525 (540)
..+....... .. +. -++++++.|+.+ ..+.+||+.+.+-...-..+........+.+ ++++++.|+ ++
T Consensus 200 ~~~p~~r~~~-~~--~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 273 (308)
T 1zgk_A 200 TAMNTIRSGA-GV--CV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDG 273 (308)
T ss_dssp CCCSSCCBSC-EE--EE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred CCCCCccccc-eE--EE-ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCC
Confidence 2221111111 11 22 266777777764 5689999876543221111011111122222 577777776 43
Q ss_pred -----eeEEEEcccc
Q psy18231 526 -----NVKLWTAEED 535 (540)
Q Consensus 526 -----~i~iw~~~~~ 535 (540)
.+.+||++++
T Consensus 274 ~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 274 HTFLDSVECYDPDTD 288 (308)
T ss_dssp SCBCCEEEEEETTTT
T ss_pred CcccceEEEEcCCCC
Confidence 5778887643
No 341
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=97.15 E-value=0.00061 Score=62.45 Aligned_cols=93 Identities=11% Similarity=0.064 Sum_probs=64.3
Q ss_pred cceecCCceEEeccCCCCCHHHHHHHHHcCC-CEEEeeeeecccccccchhhccccccCCCCCCEEEEEecCChhHHHHH
Q psy18231 10 RSTLLKNLKHCDSTLWTSKLNFRQLVRSHNV-DLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFVRA 88 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~ 88 (540)
+...++.+++.|||.|+++..++..+.+.|+ ++....+++..++.+.-+.... ..+.|+.++++..+++.-...
T Consensus 21 ~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~-----~~~~p~gVnl~~~~~~~~~~~ 95 (326)
T 3bo9_A 21 DLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQ-----KTDKPFGVNIILVSPWADDLV 95 (326)
T ss_dssp HHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHT-----TCSSCEEEEEETTSTTHHHHH
T ss_pred HhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHH-----hcCCCEEEEEeccCCCHHHHH
Confidence 4556788999999999999999999999986 7777777665544332221111 124789999998666432222
Q ss_pred HHHhcCCCCeEeeccCCCc
Q psy18231 89 TQYVAPHCNGVDLNCGCPQ 107 (540)
Q Consensus 89 ~~~~~~~~~~id~~~gc~~ 107 (540)
...+..+.+.|.++.|+|.
T Consensus 96 ~~~~~~g~d~V~l~~g~p~ 114 (326)
T 3bo9_A 96 KVCIEEKVPVVTFGAGNPT 114 (326)
T ss_dssp HHHHHTTCSEEEEESSCCH
T ss_pred HHHHHCCCCEEEECCCCcH
Confidence 2234557899999998874
No 342
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.15 E-value=0.0017 Score=59.55 Aligned_cols=116 Identities=10% Similarity=0.034 Sum_probs=74.0
Q ss_pred ccccceeec---ceecCCceEEeccCCCCCHHHHHHHHHcCCCEEEeeeeecccccccchhh------------------
Q psy18231 2 CRNNCRFNR---STLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKAR------------------ 60 (540)
Q Consensus 2 ~~~~~~~~~---~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 60 (540)
|+.+-++.. ++.+++++.+|-=..-.+.-+-+.+...|++.+.+.-++......+.+-+
T Consensus 31 ~~~~~~L~~~~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G 110 (354)
T 4ef8_A 31 GRGSMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNG 110 (354)
T ss_dssp ---CCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCC
T ss_pred CCCCCCcceEECCEECCCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcC
Confidence 444444443 56789999998544435666666666778777777666654322111110
Q ss_pred ----cccccc--CCCCCCEEEEEecCChhHHHHHHHHhc---C-CCCeEeeccCCCceEEEeccccceeccc
Q psy18231 61 ----NNEFST--SPEDTPLVVQFASNNHDDFVRATQYVA---P-HCNGVDLNCGCPQRWAIKEGYGCALLSK 122 (540)
Q Consensus 61 ----~~~~~~--~~~~~~~~~q~~~~~~~~~~~~~~~~~---~-~~~~id~~~gc~~~~~~~~g~g~~l~~~ 122 (540)
...+.. ...+.|+++|++|.++++++++++.+. + ++|.|++|++||... | +..|+.+
T Consensus 111 ~~~~~~~l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~----g-g~~l~~~ 177 (354)
T 4ef8_A 111 FDFYLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP----G-KPQVAYD 177 (354)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST----T-SCCGGGS
T ss_pred HHHHHHHHHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC----C-chhhccC
Confidence 011111 123579999999999999999999877 2 689999999999862 3 4566654
No 343
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.11 E-value=0.1 Score=48.07 Aligned_cols=119 Identities=8% Similarity=0.060 Sum_probs=73.1
Q ss_pred CCeEEEEeCCCCc----eEEeeeC---CceEEEEEecCCcEEEeec-----------------CCCeEEEEeccccchhh
Q psy18231 397 DCRIRRYDIRTGN----LVTDYVG---EPIVDACFTRDCQCILTCS-----------------TDECLRLFDKATGELLE 452 (540)
Q Consensus 397 dg~i~iwd~~~~~----~~~~~~~---~~i~~~~~sp~~~~l~~~~-----------------~dg~i~i~d~~~~~~~~ 452 (540)
+.+|.+|+++... .+..+.+ ...+.+.+.++|.+.++.. ..|.|.-+|. ++ +.
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VR 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EE
Confidence 5677777765432 2333443 4688999999999877754 1245555654 22 11
Q ss_pred hhccCcCCcceEEEEecCCCCeEEEee-CCCcEEEEEecC-Ccc--eeEEEecccceeeeEEEEcC-CCcEEEeec
Q psy18231 453 EYKGHKSGDFRIECCLDSKDSQIFCGS-SDGKIYKWQLVD-SSQ--ISTLIHSVGKAVVNSLCSHP-TRKHIMSAC 523 (540)
Q Consensus 453 ~~~~~~~~v~~~~~~~s~~~~~l~s~s-~dg~i~iwd~~~-~~~--~~~~~~~~~~~~v~~l~~s~-d~~~l~s~~ 523 (540)
.+...-..-+.+ +|+||++.|+.+. ..+.|+.|++.. ++. ...+. ..+..-.+++.+ +|.+.+++.
T Consensus 215 ~~~~~l~~pNGi--a~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~---~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 215 VVAEGFDFANGI--NISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS---FDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEESSEEEE--EECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE---CSSEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCcccCcc--eECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe---CCCCCceEEEeCCCCcEEEEec
Confidence 221111222344 8999998877664 578899999864 332 12232 246678899999 599888665
No 344
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.08 E-value=0.15 Score=45.65 Aligned_cols=256 Identities=14% Similarity=0.141 Sum_probs=142.3
Q ss_pred CCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEE
Q psy18231 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI 264 (540)
Q Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 264 (540)
+.+|.|.|+.++....+..- ...+.-.+|..+.+|.-. ..+++|+|+++.+.+..+.- ...|.-=.|-.+ +.|+
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~ 121 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVA 121 (365)
T ss_dssp EEEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SEEE
T ss_pred CCEEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCC-CeEE
Confidence 34788889887654433221 123445688888777665 67899999999988877654 456777777654 3455
Q ss_pred EecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccc
Q psy18231 265 SGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQ 344 (540)
Q Consensus 265 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (540)
-.+ +..|.-|+++... .|.........
T Consensus 122 lVT-~taVyHWs~~~~s-~P~kvFdR~~~--------------------------------------------------- 148 (365)
T 2xzh_A 122 LVT-DNAVYHWSMEGES-QPVKMFDRHSS--------------------------------------------------- 148 (365)
T ss_dssp EEE-SSEEEEEESSTTC-CCEEEEECCGG---------------------------------------------------
T ss_pred EEc-CCcEEEEcccCCC-CCceeeecchh---------------------------------------------------
Confidence 554 4579999997632 23221111111
Q ss_pred eeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeee-------CCCeEEEEeCCCCceEEeee
Q psy18231 345 HLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTAS-------LDCRIRRYDIRTGNLVTDYV 415 (540)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~-------~dg~i~iwd~~~~~~~~~~~ 415 (540)
+. ...|.....++ ++++..+ -.|.+.+|..+. +..+.++
T Consensus 149 -----------------------------L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ie 196 (365)
T 2xzh_A 149 -----------------------------LA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIE 196 (365)
T ss_dssp -----------------------------GT--TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEEC
T ss_pred -----------------------------cc--cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceee
Confidence 00 12233333333 3322221 236788998874 4445555
Q ss_pred CCceEEEEEecCCc-----EEEeecC---CCeEEEEecccc-chhhhh---------ccCcCCcceEEEEecCCCCeEEE
Q psy18231 416 GEPIVDACFTRDCQ-----CILTCST---DECLRLFDKATG-ELLEEY---------KGHKSGDFRIECCLDSKDSQIFC 477 (540)
Q Consensus 416 ~~~i~~~~~sp~~~-----~l~~~~~---dg~i~i~d~~~~-~~~~~~---------~~~~~~v~~~~~~~s~~~~~l~s 477 (540)
+|...-..+-.+|+ ++..+.. .+.++|.++... .--..| ......-.-+.+..|+.-..++.
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 55433333333322 3333322 258888887432 111111 11111112244466777778888
Q ss_pred eeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcc
Q psy18231 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 478 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
-+.-|.|++||++++.++..-+ -..+.|..-+-+.+..=++... .|.|.--.++
T Consensus 277 iTK~G~ihlyDleTgt~i~~nr--IS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTCIYMNR--ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred EeCCcEEEEEEcccCcEEEEec--cCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 8999999999999999988877 4455555545443333333333 6665544443
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.00 E-value=0.06 Score=58.09 Aligned_cols=231 Identities=12% Similarity=0.155 Sum_probs=136.6
Q ss_pred EEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCC-ceeEecccc-
Q psy18231 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREH- 247 (540)
Q Consensus 170 v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h- 247 (540)
.-.+|..+.||.=. ..++.|+|+++...++++.- ...|.-=.|-.+ +.|+-.+ +..|.-|++... .+...+..|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 33578888777654 68999999999888887764 345555556533 3444443 357999999643 444445444
Q ss_pred ---CCceeEEEECCCCCEEEEec-------CCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeeccccccccc
Q psy18231 248 ---ASKVTCVKFNEDSSVVISGS-------QDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317 (540)
Q Consensus 248 ---~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (540)
...|..-..+++.++++..| -.|.+.+|..+......
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~--------------------------------- 193 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP--------------------------------- 193 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh---------------------------------
Confidence 45677777788888776433 24677777776654322
Q ss_pred CceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC----CeeEe
Q psy18231 318 GLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD----HEILT 393 (540)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~l~~ 393 (540)
+.+|...-..+.... ..+++
T Consensus 194 --------------------------------------------------------iegha~~F~~~~~~~~~~~~~l~~ 217 (1630)
T 1xi4_A 194 --------------------------------------------------------IEGHAASFAQFKMEGNAEESTLFC 217 (1630)
T ss_pred --------------------------------------------------------hhHhHhhhheeccCCCCCCceEEE
Confidence 222222222221111 11111
Q ss_pred -ee---CCCeEEEEeCCCC---ceEE-----ee------eCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhc
Q psy18231 394 -AS---LDCRIRRYDIRTG---NLVT-----DY------VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK 455 (540)
Q Consensus 394 -~~---~dg~i~iwd~~~~---~~~~-----~~------~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 455 (540)
+. ..+++.|-++... .... .+ ...-..++..|+....+..-+.-|.+++||+.++.++..-+
T Consensus 218 f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 11 1267888877543 1110 00 11335677888888888889999999999999999887766
Q ss_pred cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcce
Q psy18231 456 GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI 495 (540)
Q Consensus 456 ~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~ 495 (540)
-....|... +.+....=++.....|.|.--.+.....+
T Consensus 298 is~~~iF~~--~~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 298 ISGETIFVT--APHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred ccCCceEEe--ccCCCCCceEEEcCCceEEEEEEccchhh
Confidence 555555544 33333333444556676666655554443
No 346
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.98 E-value=0.062 Score=49.04 Aligned_cols=106 Identities=12% Similarity=0.047 Sum_probs=53.5
Q ss_pred CCCCCEEEEeeC----C-------CcEEEEcCCCCeeEEEeecCCcce-eEEEEeeCCCeEEEeeCC--------CeEEE
Q psy18231 173 PVDGSYCLTCGS----D-------KKIKLWNPYRNLLLKTYGGHAHEV-NDATAACDSSQIASGASD--------KSVIL 232 (540)
Q Consensus 173 spdg~~lat~~~----d-------g~i~iwd~~~~~~~~~~~~h~~~v-~~l~~sp~~~~l~s~s~d--------g~i~i 232 (540)
..+++.++.|+. + ..+.+||+.+++-...-......- .+++. -+++.++.|+.+ ..+.+
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEE
Confidence 347777777773 1 127788887765322111111111 12222 267777777742 46889
Q ss_pred EEcCCCceeEe--ccccCCceeEEEECCCCCEEEEecC-C-----CcEEEEEecCCC
Q psy18231 233 WEVTTGQPVRR--WREHASKVTCVKFNEDSSVVISGSQ-D-----NTVMMWDVKSRS 281 (540)
Q Consensus 233 wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~-d-----g~i~iwd~~~~~ 281 (540)
||..+.+-... +......-..+. -+++.++.|+. + ..+.+||+.+.+
T Consensus 122 ~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 122 YDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred ECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 99887653322 111111112222 24566667765 2 346667665543
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.88 E-value=0.069 Score=48.80 Aligned_cols=92 Identities=14% Similarity=0.216 Sum_probs=47.4
Q ss_pred CeEEEEeCCCCceEEe--eeCCc-eEEEEEecCCcEEEeecCC-----CeEEEEeccccc--hhhhhccCcCCcceEEEE
Q psy18231 398 CRIRRYDIRTGNLVTD--YVGEP-IVDACFTRDCQCILTCSTD-----ECLRLFDKATGE--LLEEYKGHKSGDFRIECC 467 (540)
Q Consensus 398 g~i~iwd~~~~~~~~~--~~~~~-i~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~ 467 (540)
..+.+||+.+.+-... +.... -.+++ .-++++++.|+.+ ..+.+||..+.+ .+..+..... ... +
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~-~ 249 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS---SIS-L 249 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB---SCE-E
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEE-EECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc---ceE-E
Confidence 3588899887653221 11111 11222 2367777777643 357788987653 2222211111 111 1
Q ss_pred ecCCCCeEEEeeCC--------------CcEEEEEecCCcc
Q psy18231 468 LDSKDSQIFCGSSD--------------GKIYKWQLVDSSQ 494 (540)
Q Consensus 468 ~s~~~~~l~s~s~d--------------g~i~iwd~~~~~~ 494 (540)
...++++++.|+.+ ..+.+||+.+.+-
T Consensus 250 ~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 250 VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp EEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred EEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 22356777777654 3577888766543
No 348
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.82 E-value=0.024 Score=52.85 Aligned_cols=108 Identities=11% Similarity=0.201 Sum_probs=77.4
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCe------------eEEEeec------CCcceeEEEEee---CCCeEEEe
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL------------LLKTYGG------HAHEVNDATAAC---DSSQIASG 224 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~------------~~~~~~~------h~~~v~~l~~sp---~~~~l~s~ 224 (540)
.|..+..||+|++||..+ +..|.|-.+..+. ..+.+.- ...+|..+.|+| .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999999886 5688888776321 1233332 256799999999 56689999
Q ss_pred eCCCeEEEEEcCCC--ceeEecc---------ccCCceeEEEECCCCCEEEE--ecCCCcEEEE
Q psy18231 225 ASDKSVILWEVTTG--QPVRRWR---------EHASKVTCVKFNEDSSVVIS--GSQDNTVMMW 275 (540)
Q Consensus 225 s~dg~i~iwd~~~~--~~~~~~~---------~h~~~v~~~~~~~~~~~l~s--~~~dg~i~iw 275 (540)
..|++|++||+... ++. .++ .....|.+++|.+++-.|+. .++.|.|.-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999999753 122 222 23367889999987766666 4477877654
No 349
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.80 E-value=0.63 Score=48.37 Aligned_cols=350 Identities=10% Similarity=0.046 Sum_probs=160.3
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEecc
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR 245 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (540)
.|.++...+++..|..|.. +-+..+|..+++......-....|.++....+|.+.+ |+.+ -+.+++..+++......
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~ 268 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIH 268 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECC
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEc
Confidence 3788888777765555553 4577888877654322111234688887777776544 4444 47788876654432211
Q ss_pred -------ccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccC
Q psy18231 246 -------EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNG 318 (540)
Q Consensus 246 -------~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
-....|.++....+|. |..|+..| +.++.. ... ........ .. .......+..+.....+.+..+
T Consensus 269 ~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~-~~~---~~~~~~~~-~~-~~~~~~~v~~i~~D~~g~lWiG 340 (758)
T 3ott_A 269 DSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRY-NSA---LQFIPISQ-IT-GTGDGNQFYSLFRDSKGFYWFG 340 (758)
T ss_dssp CTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECC-CC----CEEEEHHH-HS-CSCCCCBEEEEEECTTCCEEEE
T ss_pred CCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-cccccc-CCc---eeEEeccc-CC-CCCCCceEEEEEEcCCCCEEEe
Confidence 1234688988887776 55565566 544422 111 11000000 00 0001112222222222222211
Q ss_pred ceeeEEEeeeec-----------------cc-ccceeeeeeccceeEEEeecccceecccccccccccchh-hhh-hccc
Q psy18231 319 LLTKLVFAFRCK-----------------YL-NGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF-QAL-KEAR 378 (540)
Q Consensus 319 ~~~~~~~~~~~~-----------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 378 (540)
..... ..+... .+ ...+..+....++.+.+... +.....+........-.. ... ....
T Consensus 341 t~~Gl-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~ 418 (758)
T 3ott_A 341 GANGL-IRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIATD-GSINRYDYATRQFIHYNIVDNTGTYNT 418 (758)
T ss_dssp ETTEE-EEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEET-TEEEEEETTTTEEEEEEEECCC--CBS
T ss_pred eCCcc-eeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEeC-CcHhhcCcCCCcEEEeecCCCcCCCCC
Confidence 11111 111000 00 11122222222333333221 111111111000000000 000 0023
Q ss_pred ccEEEEEecC-CeeEeeeCCCeEEEEeCCCC-----ceE---Eee------eCCceEEEEEecCCcEEEeecCCCeEEEE
Q psy18231 379 DSITSVHVSD-HEILTASLDCRIRRYDIRTG-----NLV---TDY------VGEPIVDACFTRDCQCILTCSTDECLRLF 443 (540)
Q Consensus 379 ~~v~~l~~~~-~~l~~~~~dg~i~iwd~~~~-----~~~---~~~------~~~~i~~~~~sp~~~~l~~~~~dg~i~i~ 443 (540)
..|.++..++ ..|..|+..+-|.++|.++. ... ..+ ....|.++...++|++.+.++..+-+..+
T Consensus 419 ~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~ 498 (758)
T 3ott_A 419 NWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKI 498 (758)
T ss_dssp SSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEE
T ss_pred ceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEE
Confidence 4578888776 77888888777888886531 111 111 12358899999999877633333458888
Q ss_pred eccccchhhhhc-cC--cCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEE
Q psy18231 444 DKATGELLEEYK-GH--KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 520 (540)
Q Consensus 444 d~~~~~~~~~~~-~~--~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~ 520 (540)
|..+++...... .. ...+.++ ....+|.+.+ |+..| +..||..+.+....-...-....|.++... +|.+.+
T Consensus 499 d~~~~~~~~~~~~~~~~~~~~~~i--~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g~lWi 573 (758)
T 3ott_A 499 NPRTREVTKLFADELTGEKSPNYL--LCDEDGLLWV-GFHGG-VMRINPKDESQQSISFGSFSNNEILSMTCV-KNSIWV 573 (758)
T ss_dssp ETTTTEEEEECTTTSCGGGCEEEE--EECTTSCEEE-EETTE-EEEECC--CCCCBCCCCC---CCEEEEEEE-TTEEEE
T ss_pred eCCCCceEEecCCCcCCCcccceE--EECCCCCEEE-EecCc-eEEEecCCCceEEecccCCCccceEEEEEC-CCCEEE
Confidence 987665332111 11 1223333 5666776544 44444 788886655432110000112457777664 665555
Q ss_pred eecCCeeEEEEccc
Q psy18231 521 SACGNNVKLWTAEE 534 (540)
Q Consensus 521 s~~d~~i~iw~~~~ 534 (540)
++..| |..++.++
T Consensus 574 ~t~~G-l~~~~~~~ 586 (758)
T 3ott_A 574 STTNG-LWIIDRKT 586 (758)
T ss_dssp EESSC-EEEEETTT
T ss_pred ECCCC-eEEEcCCC
Confidence 44344 55556543
No 350
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.74 E-value=0.17 Score=46.66 Aligned_cols=147 Identities=9% Similarity=0.061 Sum_probs=85.6
Q ss_pred EEEEecC-CeeEeee-------------CCCeEEEEeCCCC--ce-EEeeeC-------CceEEEEEec--CCc--EEEe
Q psy18231 382 TSVHVSD-HEILTAS-------------LDCRIRRYDIRTG--NL-VTDYVG-------EPIVDACFTR--DCQ--CILT 433 (540)
Q Consensus 382 ~~l~~~~-~~l~~~~-------------~dg~i~iwd~~~~--~~-~~~~~~-------~~i~~~~~sp--~~~--~l~~ 433 (540)
..+...+ ..+++++ .+|.|.++|+++. +. ...+.+ -....+.+.+ ++. ++++
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 3445555 5555555 6899999999743 22 112222 2566777766 343 4444
Q ss_pred ecC--CCeEEEEeccccc----hhhhhccCcCCcceEEEEecCCCCeEEEee-----------------CCCcEEEEEec
Q psy18231 434 CST--DECLRLFDKATGE----LLEEYKGHKSGDFRIECCLDSKDSQIFCGS-----------------SDGKIYKWQLV 490 (540)
Q Consensus 434 ~~~--dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s-----------------~dg~i~iwd~~ 490 (540)
-.. +.+|.+|++.... .+.++.+.. -...-.....++|++.++.. ..|.|+-+|
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~-~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d-- 209 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL-LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS-- 209 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTT-CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC--
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCC-CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE--
Confidence 333 5678888776532 223333321 11222337778898777754 124454444
Q ss_pred CCcceeEEEecccceeeeEEEEcCCCcEEEeec--CCeeEEEEccc
Q psy18231 491 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAEE 534 (540)
Q Consensus 491 ~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~~ 534 (540)
.++ +..+. ..-...+.++||||++.|..+. .+.|..|++..
T Consensus 210 ~~~-~~~~~--~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 210 PND-VRVVA--EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp TTC-CEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCe-EEEee--cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 343 33333 2345679999999998887776 78999999864
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.65 E-value=0.082 Score=49.23 Aligned_cols=92 Identities=9% Similarity=0.049 Sum_probs=45.2
Q ss_pred CCCEEEEeeC-CCcEEEEcCCCC-eeEEEeec-C-Ccce-eEEEEeeCCCeEEEeeC-C---------CeEEEEEcCCCc
Q psy18231 175 DGSYCLTCGS-DKKIKLWNPYRN-LLLKTYGG-H-AHEV-NDATAACDSSQIASGAS-D---------KSVILWEVTTGQ 239 (540)
Q Consensus 175 dg~~lat~~~-dg~i~iwd~~~~-~~~~~~~~-h-~~~v-~~l~~sp~~~~l~s~s~-d---------g~i~iwd~~~~~ 239 (540)
+++..+.|+. ...+.++|+.+. ..-..+.. . .... .+++. -++++++.|+. + ..+.+||..+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 5666666654 346888887641 11222211 1 1111 12222 36777777776 2 468889988765
Q ss_pred eeEec--c-ccCCceeEEEECCCCCEEEEecCC
Q psy18231 240 PVRRW--R-EHASKVTCVKFNEDSSVVISGSQD 269 (540)
Q Consensus 240 ~~~~~--~-~h~~~v~~~~~~~~~~~l~s~~~d 269 (540)
-...- . .....-.++. .++++++.|+.+
T Consensus 98 W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred EEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 43321 1 1111112222 356666777654
No 352
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.57 E-value=0.5 Score=44.22 Aligned_cols=256 Identities=14% Similarity=0.139 Sum_probs=143.9
Q ss_pred CCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEE
Q psy18231 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI 264 (540)
Q Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 264 (540)
+.+|.|.|+.++..+.+..- .-.+.-.+|..+.+|.-. ..+++|+|+++.+.+..+.-. ..|.-=.|-.+ +.|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~-~~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISL-NTVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEET-TEEE
T ss_pred CCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCC-CeEE
Confidence 44788889887654433221 123456788888777665 689999999999888776543 45666666543 3555
Q ss_pred EecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCceeeEEEeeeecccccceeeeeeccc
Q psy18231 265 SGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQ 344 (540)
Q Consensus 265 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (540)
..+ +..|.-|+++... .|.........
T Consensus 121 lVT-~taVyHWsi~~~s-~P~kvFdR~~~--------------------------------------------------- 147 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGES-QPVKMFDRHSS--------------------------------------------------- 147 (494)
T ss_dssp EEC-SSEEEEEESSSSC-CCEEEEECCGG---------------------------------------------------
T ss_pred EEc-CCeeEEecccCCC-Cchhheecchh---------------------------------------------------
Confidence 554 4689999997632 22221111110
Q ss_pred eeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC--CeeEeee-------CCCeEEEEeCCCCceEEeee
Q psy18231 345 HLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD--HEILTAS-------LDCRIRRYDIRTGNLVTDYV 415 (540)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~~~~-------~dg~i~iwd~~~~~~~~~~~ 415 (540)
+. ...|.....++ ++++..+ -.|.+.+|..+. +..+.+.
T Consensus 148 -----------------------------L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ie 195 (494)
T 1bpo_A 148 -----------------------------LA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIE 195 (494)
T ss_dssp -----------------------------GT--TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEEC
T ss_pred -----------------------------cc--cceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchhe
Confidence 00 12233333333 3332221 246788998874 3445555
Q ss_pred CCceEEEEEecCC-----cEEEeecC---CCeEEEEecccc-chhhhh---------ccCcCCcceEEEEecCCCCeEEE
Q psy18231 416 GEPIVDACFTRDC-----QCILTCST---DECLRLFDKATG-ELLEEY---------KGHKSGDFRIECCLDSKDSQIFC 477 (540)
Q Consensus 416 ~~~i~~~~~sp~~-----~~l~~~~~---dg~i~i~d~~~~-~~~~~~---------~~~~~~v~~~~~~~s~~~~~l~s 477 (540)
+|...-..+-.+| +++..+.. .+.++|.++... ..-..| ......-.-+.+..|+.-..++.
T Consensus 196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 5543333333333 23333332 378999988543 100111 11111112344467777778889
Q ss_pred eeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEEEEcc
Q psy18231 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAE 533 (540)
Q Consensus 478 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~iw~~~ 533 (540)
-+.-|.|.+||++++.++..-+ -...+|..-+-..+..=++... .|.|.--.++
T Consensus 276 iTK~G~i~lyDleTgt~i~~nr--Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTCIYMNR--ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred EecCceEEEEecccceeeeeec--ccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 9999999999999999988877 4455565555444433333333 6665544443
No 353
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.54 E-value=0.22 Score=45.41 Aligned_cols=105 Identities=9% Similarity=0.072 Sum_probs=52.7
Q ss_pred CCCCCEEEEeeC----CC-------cEEEEcCCCCeeEEE--eecCCcceeEEEEeeCCCeEEEeeCC-------CeEEE
Q psy18231 173 PVDGSYCLTCGS----DK-------KIKLWNPYRNLLLKT--YGGHAHEVNDATAACDSSQIASGASD-------KSVIL 232 (540)
Q Consensus 173 spdg~~lat~~~----dg-------~i~iwd~~~~~~~~~--~~~h~~~v~~l~~sp~~~~l~s~s~d-------g~i~i 232 (540)
..+++.++.|+. ++ .+.+||..+.+-... +...... .+++. -+++.++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-FGLGE-VDDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-CEEEE-ETTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-cceEE-ECCEEEEEcCccCCCCcccceEEE
Confidence 456777777773 12 177888877654322 1111111 12222 267777777754 35788
Q ss_pred EEcCCCceeEe--ccccCCceeEEEECCCCCEEEEecCC------CcEEEEEecCCC
Q psy18231 233 WEVTTGQPVRR--WREHASKVTCVKFNEDSSVVISGSQD------NTVMMWDVKSRS 281 (540)
Q Consensus 233 wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~ 281 (540)
||..+.+-... +......-..+. .++.+++.|+.+ ..+.+||+.+.+
T Consensus 132 yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp EETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred EeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 88877654332 111111111122 256666666542 346677766543
No 354
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.54 E-value=0.47 Score=43.53 Aligned_cols=107 Identities=12% Similarity=0.019 Sum_probs=64.7
Q ss_pred ecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCee--EEEe----ecCCcceeEEEEeeC----CCeEEEe--eCCCeEE
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLL--LKTY----GGHAHEVNDATAACD----SSQIASG--ASDKSVI 231 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~--~~~~----~~h~~~v~~l~~sp~----~~~l~s~--s~dg~i~ 231 (540)
...-..|+|.|||+++++--..|.|++++..+++. +..+ .........++++|+ +.+.++- ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 35567999999999776655489999998765543 2222 123466789999995 4443432 2445666
Q ss_pred EEEcCCCc----------ee-Eecc-ccCCceeEEEECCCCCEEEEecCCC
Q psy18231 232 LWEVTTGQ----------PV-RRWR-EHASKVTCVKFNEDSSVVISGSQDN 270 (540)
Q Consensus 232 iwd~~~~~----------~~-~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg 270 (540)
-|.+..+. .+ ..+. .....-..|.|.|||.+.++.+..+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~ 161 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESG 161 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTT
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCC
Confidence 66665421 11 1121 1122346788999988777665433
No 355
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.51 E-value=0.27 Score=45.88 Aligned_cols=66 Identities=21% Similarity=0.243 Sum_probs=50.2
Q ss_pred ccccEEEEEecC-----CeeEeeeCCCeEEEEeCCCCc--eEEeee------C-----CceEEEEEecCCcEEEeec--C
Q psy18231 377 ARDSITSVHVSD-----HEILTASLDCRIRRYDIRTGN--LVTDYV------G-----EPIVDACFTRDCQCILTCS--T 436 (540)
Q Consensus 377 ~~~~v~~l~~~~-----~~l~~~~~dg~i~iwd~~~~~--~~~~~~------~-----~~i~~~~~sp~~~~l~~~~--~ 436 (540)
...+|..+.|+| ..|++-..|+.|++||+.... +. .+. + ..|.+++|.+++-.|.+.+ .
T Consensus 123 ~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~ 201 (452)
T 3pbp_A 123 PKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTE 201 (452)
T ss_dssp CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTT
T ss_pred CCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCC
Confidence 357899999999 579999999999999998522 11 221 1 4689999999887777744 7
Q ss_pred CCeEEEE
Q psy18231 437 DECLRLF 443 (540)
Q Consensus 437 dg~i~i~ 443 (540)
+|.|+-.
T Consensus 202 ~GDIYAl 208 (452)
T 3pbp_A 202 GGDIFAF 208 (452)
T ss_dssp SCEEEEE
T ss_pred CCCEEEE
Confidence 8888654
No 356
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.51 E-value=0.98 Score=46.89 Aligned_cols=354 Identities=10% Similarity=0.045 Sum_probs=170.3
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEe-ecC----CcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCc
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY-GGH----AHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~-~~h----~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 239 (540)
..|.++....+|.+.+ |+.+ -+..++..+++..... ... ...|.++...+++..|..|+. +-+..+|..+++
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 4588888888887655 4444 4777887766543211 111 224788877766665555554 457888877665
Q ss_pred eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEEEEeecccccccccCc
Q psy18231 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319 (540)
Q Consensus 240 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (540)
...........|.++....+|.+.+ |+.+ -+.+++..+.+........ . .........+..+.....+.+-.+.
T Consensus 223 ~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~--~--~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 223 IKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDS--R--NIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp EEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECCCT--T--CTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred EEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEcCC--C--CcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 3322112234688888887776544 4544 4777776654321111000 0 0000011122222222222222111
Q ss_pred eeeEEEe--------eeec-----ccccceeeeeeccceeEEEeecccceeccccccccc-ccchhh----hhhcccccE
Q psy18231 320 LTKLVFA--------FRCK-----YLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI-HNSCFQ----ALKEARDSI 381 (540)
Q Consensus 320 ~~~~~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~v 381 (540)
....... .... .....+..+....++.+.+....|.... +...... ...... ...-....|
T Consensus 297 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~Gl~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~v 375 (758)
T 3ott_A 297 DYGISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANGLIRF-TDPAGERHDAIWYRMGDKTYPLSHNRI 375 (758)
T ss_dssp SSSEEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTEEEEE-SCTTSSCCCCEEECTTCSSSCCSCSCE
T ss_pred CCcccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCcceee-cccccccceeEEeccCCcCCCCCCCce
Confidence 1111100 0000 0011122222233333333322111111 0000000 000000 000123458
Q ss_pred EEEEecC-CeeEeeeCCCeEEEEeCCCCceEEee--------eCCceEEEEEecCCcEEEeecCCCeEEEEecccc----
Q psy18231 382 TSVHVSD-HEILTASLDCRIRRYDIRTGNLVTDY--------VGEPIVDACFTRDCQCILTCSTDECLRLFDKATG---- 448 (540)
Q Consensus 382 ~~l~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--------~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~---- 448 (540)
.++.-+. ..|..|+ ++-|..||.++++...-. ....|.++...++|++. .|+..+-+.++|..+.
T Consensus 376 ~~i~~d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igT~~~Gl~~~~~~~~~~~~ 453 (758)
T 3ott_A 376 RHIYEDKEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLW-ISTCLGGIFVVDKHKLMQST 453 (758)
T ss_dssp EEEEECTTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEE-EEESSSCEEEEEHHHHHHCC
T ss_pred EEEEECCCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEE-EEECCCceEEEccccccccC
Confidence 8888776 6677777 457999999877653321 12357888877777654 4665556888885431
Q ss_pred -chh---hhhc---c-CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecc--cceeeeEEEEcCCCcE
Q psy18231 449 -ELL---EEYK---G-HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV--GKAVVNSLCSHPTRKH 518 (540)
Q Consensus 449 -~~~---~~~~---~-~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~s~d~~~ 518 (540)
... ..+. + ....|..+ ...++|.+.+.++..+-|..+|..+++.. .+.... ....+.++....+|.+
T Consensus 454 ~~~~~~~~~~~~~~~l~~~~i~~i--~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~-~~~~~~~~~~~~~~~i~~d~~g~l 530 (758)
T 3ott_A 454 SGQYIAEQNYSVHNGLSGMFINQI--IPDNEGNVWVLLYNNKGIDKINPRTREVT-KLFADELTGEKSPNYLLCDEDGLL 530 (758)
T ss_dssp SSEEECSEEECGGGTCSCSCEEEE--EECTTSCEEEEETTCSSEEEEETTTTEEE-EECTTTSCGGGCEEEEEECTTSCE
T ss_pred CcceecccccccccccccceeeeE--EEcCCCCEEEEccCCCCcEEEeCCCCceE-EecCCCcCCCcccceEEECCCCCE
Confidence 100 0111 1 11224444 67778876653333455888887665433 332101 1346788888888887
Q ss_pred EEeecCCeeEEEEccc
Q psy18231 519 IMSACGNNVKLWTAEE 534 (540)
Q Consensus 519 l~s~~d~~i~iw~~~~ 534 (540)
.+++.+ -+..++..+
T Consensus 531 Wigt~~-Gl~~~~~~~ 545 (758)
T 3ott_A 531 WVGFHG-GVMRINPKD 545 (758)
T ss_dssp EEEETT-EEEEECC--
T ss_pred EEEecC-ceEEEecCC
Confidence 765544 477777643
No 357
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.44 E-value=0.57 Score=43.39 Aligned_cols=61 Identities=5% Similarity=-0.024 Sum_probs=39.3
Q ss_pred CCCeEEEeeCCCcEEEEEecCCcceeEEEe-cccceeeeEEEEcCCCcEEEeec--CCeeEEEEcc
Q psy18231 471 KDSQIFCGSSDGKIYKWQLVDSSQISTLIH-SVGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAE 533 (540)
Q Consensus 471 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~ 533 (540)
+|.++++.-..+.|...++..++....... ......+..+++.|||.+.++.. +| +||.+.
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g--~I~ri~ 351 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSG--ELLKVS 351 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTE--EEEEEE
T ss_pred CCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCC--EEEEEe
Confidence 466777766778888888876654433221 12234789999999999777644 45 455543
No 358
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.41 E-value=0.033 Score=50.89 Aligned_cols=106 Identities=9% Similarity=0.003 Sum_probs=58.7
Q ss_pred CCeeEeeeCCCeEEEEeCCCCceEEeeeCCceE---------EEEEe-----cCCcEEEeecCCCeEEEEeccccchhhh
Q psy18231 388 DHEILTASLDCRIRRYDIRTGNLVTDYVGEPIV---------DACFT-----RDCQCILTCSTDECLRLFDKATGELLEE 453 (540)
Q Consensus 388 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~i~---------~~~~s-----p~~~~l~~~~~dg~i~i~d~~~~~~~~~ 453 (540)
...+++++.+|.+.-.|+++|+.+.++...... |.... ..+..++.+..+..+.+.+ ++|+ +..
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~ 188 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYN 188 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSC-CCC
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eEE
Confidence 467899999999999999999999888643211 11111 1235666777667777666 3443 221
Q ss_pred hccC--cCCcce--E--EEEecCCCCeEEEeeCCCcEEEEEecCCccee
Q psy18231 454 YKGH--KSGDFR--I--ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIS 496 (540)
Q Consensus 454 ~~~~--~~~v~~--~--~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~ 496 (540)
++-. ...... + ....+.|+.+ +.++.||.|.-+|..+|+.+-
T Consensus 189 ~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 189 VTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp CEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 1100 000000 0 0011234555 446778888888877776654
No 359
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.41 E-value=0.26 Score=45.71 Aligned_cols=133 Identities=14% Similarity=-0.021 Sum_probs=60.7
Q ss_pred CeEEEEeCCCCceEE--eeeCC-ce-EEEEEecCCcEEEeecC------CCeEEEEec--ccc--chhhhhccCcCCcce
Q psy18231 398 CRIRRYDIRTGNLVT--DYVGE-PI-VDACFTRDCQCILTCST------DECLRLFDK--ATG--ELLEEYKGHKSGDFR 463 (540)
Q Consensus 398 g~i~iwd~~~~~~~~--~~~~~-~i-~~~~~sp~~~~l~~~~~------dg~i~i~d~--~~~--~~~~~~~~~~~~v~~ 463 (540)
..+.+||..+.+-.. .+... .. .+++. -++++++.|+. ...+.+||+ .+. +.+..+.........
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 468889988765322 22211 11 22332 36677777764 345777876 332 222222111111111
Q ss_pred EEEEecCCCCeEEEeeCC----------------------CcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEe
Q psy18231 464 IECCLDSKDSQIFCGSSD----------------------GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS 521 (540)
Q Consensus 464 ~~~~~s~~~~~l~s~s~d----------------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s 521 (540)
. +...++++++.|+.+ ..+.+||+.+.+-...-..+.....-.++ .-++++++.
T Consensus 247 ~--~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~ 322 (357)
T 2uvk_A 247 F--AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLII 322 (357)
T ss_dssp E--EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEE
T ss_pred e--EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEE
Confidence 1 222356777777632 25788998765432222211222212222 246788888
Q ss_pred ec-CC------eeEEEEcccc
Q psy18231 522 AC-GN------NVKLWTAEED 535 (540)
Q Consensus 522 ~~-d~------~i~iw~~~~~ 535 (540)
|+ ++ .|.+.+++++
T Consensus 323 GG~~~~~~~~~~v~~l~~~~~ 343 (357)
T 2uvk_A 323 GGETAGGKAVTDSVLITVKDN 343 (357)
T ss_dssp EEECGGGCEEEEEEEEEC-CC
T ss_pred eeeCCCCCEeeeEEEEEEcCc
Confidence 77 53 3444466543
No 360
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.37 E-value=0.8 Score=44.32 Aligned_cols=306 Identities=10% Similarity=0.074 Sum_probs=155.8
Q ss_pred EEEeeCCCcEEEEcCCCCeeEEEeecCC-------------------------ccee--EEEEe---eCCCeEEEeeC-C
Q psy18231 179 CLTCGSDKKIKLWNPYRNLLLKTYGGHA-------------------------HEVN--DATAA---CDSSQIASGAS-D 227 (540)
Q Consensus 179 lat~~~dg~i~iwd~~~~~~~~~~~~h~-------------------------~~v~--~l~~s---p~~~~l~s~s~-d 227 (540)
+.+|+..|.|+|+-+.+++.++.+.... +... .+++. .||++|+.-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 5688999999999999998888763211 1111 23332 26777877664 5
Q ss_pred CeEEEEEcCCCceeEecc-ccCCceeEEEEC--CCCCEEEEecCCCcEEEEEecCCCCCCcchhhhhHhhhhcCCceeEE
Q psy18231 228 KSVILWEVTTGQPVRRWR-EHASKVTCVKFN--EDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSV 304 (540)
Q Consensus 228 g~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (540)
..|-.-++...++-+.+. .....+..+.|. |+..+++.+++.. +-+ ...+...++. . .... .+
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~-~P~--pndg~~~~~~-----~-----~~~y-~~ 218 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFI-IPH--PNDGKVFDLQ-----D-----ENSY-TM 218 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSC-EES--SCSSSCCCTT-----S-----TTEE-EE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceee-ccC--CCCCcccccC-----C-----hhhc-eE
Confidence 677778888777665544 346678888886 6778888887642 211 0111100000 0 0000 11
Q ss_pred EEeecccccccccCceeeEEEeeeecccccceeeeeeccceeEEEeecccceecccccccccccchhhhhhcccccEEEE
Q psy18231 305 HSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSV 384 (540)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 384 (540)
...... ....+ .|+.. ..+.+.......++.+.+....++.....+.. ......+.+.-+
T Consensus 219 f~~iD~--------~tm~v--~~Qv~-v~gnld~~~~~~~g~~af~t~yNsE~~~~l~e---------m~~~e~D~~~vf 278 (638)
T 3sbq_A 219 YNAIDA--------ETMEM--AFQVI-VDGNLDNTDADYTGRFAAATCYNSEKAFDLGG---------MMRNERDWVVVF 278 (638)
T ss_dssp EEEEET--------TTCSE--EEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHH---------HTCSSCEEEEEE
T ss_pred EEEEcC--------CccEE--EEEEE-cCCChhhcCCCCCCCEEEEeeeccccCcChhh---------cCcccccEEEEe
Confidence 100000 00001 11111 11222233334444444443333222211111 111112222222
Q ss_pred EecC--------CeeEeeeCCC-eEEEEeCCC----Cce-EEeee-CCceEEEEEecCCcEEEeecC-CCeEEEEecccc
Q psy18231 385 HVSD--------HEILTASLDC-RIRRYDIRT----GNL-VTDYV-GEPIVDACFTRDCQCILTCST-DECLRLFDKATG 448 (540)
Q Consensus 385 ~~~~--------~~l~~~~~dg-~i~iwd~~~----~~~-~~~~~-~~~i~~~~~sp~~~~l~~~~~-dg~i~i~d~~~~ 448 (540)
.|-. +... .+| .+.+.|.+. +.. ...+. ......+.++|||+++++++. +.++.++|++..
T Consensus 279 n~~~ie~~vk~G~~~~---~~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~ 355 (638)
T 3sbq_A 279 DIHAVEAAVKAGDFIT---LGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKL 355 (638)
T ss_dssp EHHHHHHHHHTTCCBC---CTTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGH
T ss_pred cHHHHHHHHhcCCeEE---ECCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehh
Confidence 2211 1111 121 477888876 322 22222 356778899999999887665 889999998753
Q ss_pred chh---------hhhccC-cCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCC----------cceeEEEecccceeee
Q psy18231 449 ELL---------EEYKGH-KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS----------SQISTLIHSVGKAVVN 508 (540)
Q Consensus 449 ~~~---------~~~~~~-~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~----------~~~~~~~~~~~~~~v~ 508 (540)
... ..+.+. .-...-+..+|.++|.-..+---|..|.-|++... ..+..+. .|-.+-.
T Consensus 356 ~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~d--v~YqpGH 433 (638)
T 3sbq_A 356 PDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLD--VHYQPGH 433 (638)
T ss_dssp HHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEE--CSSCEEE
T ss_pred hhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccc--cccCCcc
Confidence 221 111100 11122344589999955566678999999998753 3444554 3332221
Q ss_pred EE-----EEcCCCcEEEeec
Q psy18231 509 SL-----CSHPTRKHIMSAC 523 (540)
Q Consensus 509 ~l-----~~s~d~~~l~s~~ 523 (540)
-. .-.|||++|++..
T Consensus 434 ~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 434 LHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEETTTTSTTCCSCEEEEEE
T ss_pred cccCCCccCCCCccEEEEec
Confidence 11 1257888888764
No 361
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.27 E-value=1.7 Score=47.17 Aligned_cols=107 Identities=15% Similarity=0.187 Sum_probs=68.8
Q ss_pred eCCCCCEEEEeeC---------CCcEEEEcCCCCeeEEEeecC-CcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCcee
Q psy18231 172 FPVDGSYCLTCGS---------DKKIKLWNPYRNLLLKTYGGH-AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPV 241 (540)
Q Consensus 172 ~spdg~~lat~~~---------dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 241 (540)
|..+...|+++.. ...|++.+......+..+... ...|...+.+ +.+++.++ ++.+.++++..++..
T Consensus 469 f~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~ 545 (1158)
T 3ei3_A 469 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELR 545 (1158)
T ss_dssp CCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEE
T ss_pred ccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCcee
Confidence 4456667776643 234566665555556666533 3357666654 45666665 678888888765432
Q ss_pred Eec-cccCCceeEEEECCC------CCEEEEecC-CCcEEEEEecCCC
Q psy18231 242 RRW-REHASKVTCVKFNED------SSVVISGSQ-DNTVMMWDVKSRS 281 (540)
Q Consensus 242 ~~~-~~h~~~v~~~~~~~~------~~~l~s~~~-dg~i~iwd~~~~~ 281 (540)
... ..-...|.|+++.|. +++++.|.. |++++|+++.+.+
T Consensus 546 ~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 546 QISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp EEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred eecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 211 123568999999863 368999986 9999999997543
No 362
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.26 E-value=0.069 Score=44.85 Aligned_cols=134 Identities=12% Similarity=-0.089 Sum_probs=78.0
Q ss_pred eeEeeeCCCeEEEEeCCCCce------EEeeeC---CceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccCcCC
Q psy18231 390 EILTASLDCRIRRYDIRTGNL------VTDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG 460 (540)
Q Consensus 390 ~l~~~~~dg~i~iwd~~~~~~------~~~~~~---~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 460 (540)
+|++...| +++.=....+.. ...+-. ..+..++|+|+|.+.++ .+|.++-.+..+.+...-+.. ...
T Consensus 6 ~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~ 81 (236)
T 1tl2_A 6 MLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKK 81 (236)
T ss_dssp CEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEE
T ss_pred EEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccE
Confidence 45555666 655544444431 122222 47889999999997777 778877777655332111111 111
Q ss_pred c------ceEEEEecCCCCeEEEeeCCCcEEEEEecCCcce-----eEEEecccceeeeEEEEcCCCcEEEeecCCeeEE
Q psy18231 461 D------FRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI-----STLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKL 529 (540)
Q Consensus 461 v------~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~-----~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~i 529 (540)
| .-..+.|.++|.+.++ .||.|+-++-.+...- .+......-..+..|.|.|+|.+.+.. |+.++-
T Consensus 82 IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr 158 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYK 158 (236)
T ss_dssp EECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEE
T ss_pred ecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEe
Confidence 1 0123378999987777 5698887775332111 111100122467999999999988888 787543
Q ss_pred E
Q psy18231 530 W 530 (540)
Q Consensus 530 w 530 (540)
+
T Consensus 159 ~ 159 (236)
T 1tl2_A 159 A 159 (236)
T ss_dssp E
T ss_pred c
Confidence 3
No 363
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=96.15 E-value=0.005 Score=56.58 Aligned_cols=93 Identities=9% Similarity=0.059 Sum_probs=61.0
Q ss_pred eecceecCCceEEeccCCCCCHHHHHHHHHcCC-CEEEeeeee-cccccccchhhccccccCCCCCCEEEEEecC----C
Q psy18231 8 FNRSTLLKNLKHCDSTLWTSKLNFRQLVRSHNV-DLCFTPMII-ADSFIKSSKARNNEFSTSPEDTPLVVQFASN----N 81 (540)
Q Consensus 8 ~~~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~----~ 81 (540)
+.+-+.++.+++.|||+|+++..++..+.+.|+ ++..+++.. .+.+.+.-+..... .+.|+.++++.+ +
T Consensus 8 ~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~-----~~~p~~v~l~v~~~~~~ 82 (328)
T 2gjl_A 8 FTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCREL-----TDRPFGVNLTLLPTQKP 82 (328)
T ss_dssp HHHHHTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHH-----CSSCCEEEEEECCCSSC
T ss_pred HHHHhCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHh-----cCCCeEEEEeccccccC
Confidence 444455788999999999999999999999975 777776644 33322211111111 146888999887 3
Q ss_pred hhHHHHHHH-HhcCCCCeEeeccCCC
Q psy18231 82 HDDFVRATQ-YVAPHCNGVDLNCGCP 106 (540)
Q Consensus 82 ~~~~~~~~~-~~~~~~~~id~~~gc~ 106 (540)
++ +.+.++ ..+.+.+.|.++.|+|
T Consensus 83 ~~-~~~~~~~~~~~g~d~V~~~~g~p 107 (328)
T 2gjl_A 83 VP-YAEYRAAIIEAGIRVVETAGNDP 107 (328)
T ss_dssp CC-HHHHHHHHHHTTCCEEEEEESCC
T ss_pred cc-HHHHHHHHHhcCCCEEEEcCCCc
Confidence 43 223333 2345788999988876
No 364
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=96.00 E-value=0.0066 Score=56.74 Aligned_cols=61 Identities=10% Similarity=-0.028 Sum_probs=44.3
Q ss_pred ceecCCceEEeccCC--C----CCHHHHHHHHHcCCCEEEeeeeecccccccchhhccccccCCCCCCEEEEEecCC
Q psy18231 11 STLLKNLKHCDSTLW--T----SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNN 81 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~--~----~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 81 (540)
+..+++++++|||++ + +++++++.|+++|+.++++++ ++..+.+- .. . .+.|..+|++...
T Consensus 68 G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~-s~~~le~i-----~~---~-~~~~~~fQly~~~ 134 (380)
T 1p4c_A 68 GKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTA-SNMSIEDL-----AR---Q-CDGDLWFQLYVIH 134 (380)
T ss_dssp TEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTT-CSSCHHHH-----HH---H-CCSCEEEEECCSS
T ss_pred CeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCcc-ccCCHHHH-----Hh---c-cCCCeEEEEEech
Confidence 456788999999966 6 999999999999999999863 33222211 00 1 3678999998444
No 365
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.92 E-value=0.02 Score=52.95 Aligned_cols=95 Identities=13% Similarity=0.182 Sum_probs=65.0
Q ss_pred ceecCCceEEeccCCCCC--HHHHHHHHHcCCCEEEeeeeecccccccchhhc------------------------ccc
Q psy18231 11 STLLKNLKHCDSTLWTSK--LNFRQLVRSHNVDLCFTPMIIADSFIKSSKARN------------------------NEF 64 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~ 64 (540)
++.+++++.+| +|+.. ..++.+.+ .|++.+.+--++...-.-+.+-+. ..+
T Consensus 56 Gl~~~NPvglA--aG~~~~~~~~~~~~~-~g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~~N~G~~~~~~~l 132 (367)
T 3zwt_A 56 GHKFRNPVGIA--AGFDKHGEAVDGLYK-MGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRL 132 (367)
T ss_dssp TEEESSSEEEC--TTSSTTSSSHHHHHH-TTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHHH
T ss_pred CEEcCCCCEeC--CCcCCCHHHHHHHHh-cCcCeEEeCCccCCCCCCCCCCeEEEecCccceeeccCCCCccHHHHHHHH
Confidence 56789999999 56443 34666654 588888887777653221111110 011
Q ss_pred ccC--------CCCCCEEEEEecC-----ChhHHHHHHHHhcCCCCeEeeccCCCce
Q psy18231 65 STS--------PEDTPLVVQFASN-----NHDDFVRATQYVAPHCNGVDLNCGCPQR 108 (540)
Q Consensus 65 ~~~--------~~~~~~~~q~~~~-----~~~~~~~~~~~~~~~~~~id~~~gc~~~ 108 (540)
... ....|+++|+.++ ++++++++++.+.+++|.|++|++||..
T Consensus 133 ~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~ 189 (367)
T 3zwt_A 133 RARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNT 189 (367)
T ss_dssp HTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTS
T ss_pred HHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCC
Confidence 100 1256999999997 6899999999998889999999999976
No 366
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.90 E-value=1.1 Score=41.50 Aligned_cols=104 Identities=14% Similarity=0.063 Sum_probs=59.5
Q ss_pred ecCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEe-------ecCCcceeEEEEeeC---CCeEEEe-eC------
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY-------GGHAHEVNDATAACD---SSQIASG-AS------ 226 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~-------~~h~~~v~~l~~sp~---~~~l~s~-s~------ 226 (540)
......|+|.|||++|+++...|.|++++.. +.....+ .........++++|+ +..|..+ +.
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4567899999999834455668999999853 3321111 112345689999995 4444433 32
Q ss_pred -CCeEEEEEcCCCc----eeE----ecc---ccCCceeEEEECCCCCEEEEecC
Q psy18231 227 -DKSVILWEVTTGQ----PVR----RWR---EHASKVTCVKFNEDSSVVISGSQ 268 (540)
Q Consensus 227 -dg~i~iwd~~~~~----~~~----~~~---~h~~~v~~~~~~~~~~~l~s~~~ 268 (540)
...|..|++..+. ... .+. ........+.|.|||.+.++.+.
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 2356666664331 111 111 11122467999999976665543
No 367
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=95.88 E-value=0.016 Score=53.27 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=65.2
Q ss_pred cceecCCceEEeccCCCCCH-----H----HHHHHHH--cCCCEEEeeeeecccccccchhhccccc-------------
Q psy18231 10 RSTLLKNLKHCDSTLWTSKL-----N----FRQLVRS--HNVDLCFTPMIIADSFIKSSKARNNEFS------------- 65 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~~-----~----~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 65 (540)
+++.++||+++|||.+...- | .....++ -|+++..||...-..--+..+.......
T Consensus 12 g~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~ 91 (340)
T 3gr7_A 12 RGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGL 91 (340)
T ss_dssp TTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHHH
T ss_pred CCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHHH
Confidence 57889999999999875322 2 2222222 3789999998654332221111111100
Q ss_pred cCCCCCCEEEEEecCC-----------------------------------hhHHHHHHHHhcC-CCCeEeeccCC----
Q psy18231 66 TSPEDTPLVVQFASNN-----------------------------------HDDFVRATQYVAP-HCNGVDLNCGC---- 105 (540)
Q Consensus 66 ~~~~~~~~~~q~~~~~-----------------------------------~~~~~~~~~~~~~-~~~~id~~~gc---- 105 (540)
.+.....+++|+.-.. .+++++||+...+ +.|+|++|.+|
T Consensus 92 vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl 171 (340)
T 3gr7_A 92 VKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLI 171 (340)
T ss_dssp HHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHH
T ss_pred HHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHH
Confidence 1345677888884211 1356777776554 99999999996
Q ss_pred -----CceEEEeccccceecc
Q psy18231 106 -----PQRWAIKEGYGCALLS 121 (540)
Q Consensus 106 -----~~~~~~~~g~g~~l~~ 121 (540)
|......+.+|..+..
T Consensus 172 ~qFlsp~~N~R~D~yGGslen 192 (340)
T 3gr7_A 172 NEFLSPLSNRRQDEYGGSPEN 192 (340)
T ss_dssp HHHHCTTTCCCCSTTSSSHHH
T ss_pred HHcCCCccCcCCCcccCCHHH
Confidence 6543344455555543
No 368
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=95.56 E-value=0.023 Score=53.07 Aligned_cols=63 Identities=11% Similarity=-0.089 Sum_probs=47.7
Q ss_pred CCceEEeccCC-CCCHHHHHHHHHcCC-CEEEeeeeecccccccchhhccccccCCCCCCEEEEEecCCh
Q psy18231 15 KNLKHCDSTLW-TSKLNFRQLVRSHNV-DLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNH 82 (540)
Q Consensus 15 ~~~~~~ap~~~-~~~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 82 (540)
+.+++.|||++ +|+..++..+.+.|+ ++..+.|++..++.+.-+.....+ +.|+.++++...+
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~-----~~p~gVnl~~~~~ 74 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLT-----GRPFGVNVFMPQP 74 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHC-----CSCEEEEEECCCC
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhC-----CCCeEEEEecCCC
Confidence 77899999995 999999999999986 888888888776654433333222 2588888887654
No 369
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=95.42 E-value=0.022 Score=52.24 Aligned_cols=113 Identities=13% Similarity=0.127 Sum_probs=67.3
Q ss_pred cceecCCceEEeccCCCCC----HH----HHHHHHH--cCCCEEEeeeeecccccccchhhccccc-------------c
Q psy18231 10 RSTLLKNLKHCDSTLWTSK----LN----FRQLVRS--HNVDLCFTPMIIADSFIKSSKARNNEFS-------------T 66 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~----~~----~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 66 (540)
+.+.|+||+++|||.+... .| .....++ -|+++..||-..-..--+..+....... .
T Consensus 11 g~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~~v 90 (343)
T 3kru_A 11 KDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDIC 90 (343)
T ss_dssp TTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHHHH
T ss_pred eeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHHHH
Confidence 4688999999999987432 22 2222222 3789999998654332221111111000 1
Q ss_pred CCCCCCEEEEEecCC------------------------------------hhHHHHHHHHhcC-CCCeEeec-------
Q psy18231 67 SPEDTPLVVQFASNN------------------------------------HDDFVRATQYVAP-HCNGVDLN------- 102 (540)
Q Consensus 67 ~~~~~~~~~q~~~~~------------------------------------~~~~~~~~~~~~~-~~~~id~~------- 102 (540)
+.....+++|+.-.. .+++++||+...+ +.|+|++|
T Consensus 91 h~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl 170 (343)
T 3kru_A 91 KANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLI 170 (343)
T ss_dssp HHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHH
T ss_pred hcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhH
Confidence 355667888874211 1356677776544 99999999
Q ss_pred --cCCCceEEEeccccceeccc
Q psy18231 103 --CGCPQRWAIKEGYGCALLSK 122 (540)
Q Consensus 103 --~gc~~~~~~~~g~g~~l~~~ 122 (540)
+.||......+.+|..+..+
T Consensus 171 ~qFlsp~~N~R~D~yGGslenR 192 (343)
T 3kru_A 171 HEFLSPLSNKRKDEYGNSIENR 192 (343)
T ss_dssp HHHHCTTTCCCCSTTSSSHHHH
T ss_pred HHhhcccccccchhhccchHhH
Confidence 66888666666677666544
No 370
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.40 E-value=0.27 Score=45.52 Aligned_cols=136 Identities=14% Similarity=0.125 Sum_probs=77.6
Q ss_pred ccEEEEEecC-CeeEeeeCCCeEEEEeCCCCce--EEeee-----CCceEEEEEecC---CcEEEeecC-C-----CeEE
Q psy18231 379 DSITSVHVSD-HEILTASLDCRIRRYDIRTGNL--VTDYV-----GEPIVDACFTRD---CQCILTCST-D-----ECLR 441 (540)
Q Consensus 379 ~~v~~l~~~~-~~l~~~~~dg~i~iwd~~~~~~--~~~~~-----~~~i~~~~~sp~---~~~l~~~~~-d-----g~i~ 441 (540)
.....+++.| ..++++..+|.|++++ .++. +..+. ......++++|+ +..|+++.. + +.|.
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 3457899988 5677777889999998 3432 22221 246889999998 444444433 2 6788
Q ss_pred EEecccc-----chh-hhhc-----cCcCCcceEEEEecCCCCeEEEeeC-------------CCcEEEEEecCC-----
Q psy18231 442 LFDKATG-----ELL-EEYK-----GHKSGDFRIECCLDSKDSQIFCGSS-------------DGKIYKWQLVDS----- 492 (540)
Q Consensus 442 i~d~~~~-----~~~-~~~~-----~~~~~v~~~~~~~s~~~~~l~s~s~-------------dg~i~iwd~~~~----- 492 (540)
.|+...+ +.+ ..+. .|. ...+ +|.|||.+.++.+. .|.|.-++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~--~~~l--~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHS--GGRI--AFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCC--CCCE--EECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcC--CceE--EECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 8877643 111 1122 122 2344 89999976665432 145555554320
Q ss_pred -------cceeEEEecccceeeeEEEEcC-CCcEEEee
Q psy18231 493 -------SQISTLIHSVGKAVVNSLCSHP-TRKHIMSA 522 (540)
Q Consensus 493 -------~~~~~~~~~~~~~~v~~l~~s~-d~~~l~s~ 522 (540)
.....+.. ++ .....++|+| ++.+.++-
T Consensus 185 pf~~~~~~~~~i~a~-G~-rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 185 PFLGRRGARPEVYSL-GH-RNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp TTTTCTTSCTTEEEE-CC-SEECCCEECTTTCCEEEEE
T ss_pred cccCCCCCCccEEEE-cC-CCcccEEEECCCCCEEEEE
Confidence 11222221 34 3467899999 56655543
No 371
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.31 E-value=0.81 Score=46.85 Aligned_cols=108 Identities=8% Similarity=0.044 Sum_probs=59.2
Q ss_pred cCCeeEeeeCCC--eEEEEeCCCCceEEeee------C-CceEEEEEecC-CcEEEeecC--C-----CeEEEEeccccc
Q psy18231 387 SDHEILTASLDC--RIRRYDIRTGNLVTDYV------G-EPIVDACFTRD-CQCILTCST--D-----ECLRLFDKATGE 449 (540)
Q Consensus 387 ~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~------~-~~i~~~~~sp~-~~~l~~~~~--d-----g~i~i~d~~~~~ 449 (540)
...+++.|+.++ .+.+||..+.+-...-. . ....++.+..+ +++++.|+. + +.+.+||+.+.+
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 346677776544 68999998765332211 1 12233555555 777777765 2 458899987765
Q ss_pred h-----hhhhccC-cCCcceEEEEecCCCCeEEEeeC--------CCcEEEEEecCCcc
Q psy18231 450 L-----LEEYKGH-KSGDFRIECCLDSKDSQIFCGSS--------DGKIYKWQLVDSSQ 494 (540)
Q Consensus 450 ~-----~~~~~~~-~~~v~~~~~~~s~~~~~l~s~s~--------dg~i~iwd~~~~~~ 494 (540)
- ...+... ..+.....++...++++++.|+. ...|.+||+.+.+-
T Consensus 580 w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 580 ATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp SSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred cccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 1 1111110 01111111123333677777774 34689999877654
No 372
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=95.25 E-value=0.048 Score=51.49 Aligned_cols=110 Identities=13% Similarity=0.097 Sum_probs=65.0
Q ss_pred cceecCCceEEeccCCCC--------CHHHHHHHHHc-CCCEEEeeeeecccccccchhhcccc--------c-----cC
Q psy18231 10 RSTLLKNLKHCDSTLWTS--------KLNFRQLVRSH-NVDLCFTPMIIADSFIKSSKARNNEF--------S-----TS 67 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~--------~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-----~~ 67 (540)
+++.|+||+++|||.... +.-.+...++. |+++..||.+.-...-+..+...... . .+
T Consensus 35 g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~avh 114 (419)
T 3l5a_A 35 NGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTMK 114 (419)
T ss_dssp TSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGGHHHHHHHHHHHH
T ss_pred CCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHHHHHHHHHHHHHH
Confidence 467899999999998643 22233222222 78999999765443222211111000 0 13
Q ss_pred CCCCCEEEEEecCC----------------------------------------hhHHHHHHHH-hcCCCCeEeeccCC-
Q psy18231 68 PEDTPLVVQFASNN----------------------------------------HDDFVRATQY-VAPHCNGVDLNCGC- 105 (540)
Q Consensus 68 ~~~~~~~~q~~~~~----------------------------------------~~~~~~~~~~-~~~~~~~id~~~gc- 105 (540)
.....+++|+.=.. .+++++||+. ...+.|+|+++++|
T Consensus 115 ~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahG 194 (419)
T 3l5a_A 115 QHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQR 194 (419)
T ss_dssp TTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTT
T ss_pred hcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccc
Confidence 55677888886211 0356667765 44599999999998
Q ss_pred --------CceEEEecccccee
Q psy18231 106 --------PQRWAIKEGYGCAL 119 (540)
Q Consensus 106 --------~~~~~~~~g~g~~l 119 (540)
|..-...+.+|..+
T Consensus 195 YLl~QFlSp~~N~RtD~yGGs~ 216 (419)
T 3l5a_A 195 LLIQTFFSTFSNRRTDHYGADS 216 (419)
T ss_dssp SHHHHHHCTTTCCCCSTTSTTC
T ss_pred hHHHHccCCcccccccCCCCch
Confidence 65444445556666
No 373
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=95.05 E-value=0.045 Score=50.38 Aligned_cols=89 Identities=10% Similarity=0.016 Sum_probs=47.4
Q ss_pred ceecCCceEEeccCCCCCHH------HHHHHHHcCCCEEEeeeeecccccccchhh-ccccccCCCCCCEEEEEecCC-h
Q psy18231 11 STLLKNLKHCDSTLWTSKLN------FRQLVRSHNVDLCFTPMIIADSFIKSSKAR-NNEFSTSPEDTPLVVQFASNN-H 82 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~------~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~q~~~~~-~ 82 (540)
+..++.|+++|||+|.+..+ |+++|+++|..+...+|..+ ++..+.. ....... .+.+++.-+.... .
T Consensus 82 g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~---le~~~~~~~~v~r~~-P~~~~ianig~~~~~ 157 (365)
T 3sr7_A 82 GQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA---LKNPDDTSYQVKKSR-PHLLLATNIGLDKPY 157 (365)
T ss_dssp TEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC---------------------------CCEEEEEETTSCH
T ss_pred CEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc---ccCccccceEehhhC-CCCcEEEEeCCCCCH
Confidence 45678899999999999987 99999999999999999543 3332221 1111112 3566777766544 3
Q ss_pred hHHHHHHHHhcCCCCeEeecc
Q psy18231 83 DDFVRATQYVAPHCNGVDLNC 103 (540)
Q Consensus 83 ~~~~~~~~~~~~~~~~id~~~ 103 (540)
++..++++.+..+.-.|.+|.
T Consensus 158 e~~~~~ve~~~adal~ihln~ 178 (365)
T 3sr7_A 158 QAGLQAVRDLQPLFLQVHINL 178 (365)
T ss_dssp HHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEeccc
Confidence 456666666655555666664
No 374
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=94.85 E-value=0.038 Score=51.04 Aligned_cols=42 Identities=14% Similarity=-0.011 Sum_probs=28.2
Q ss_pred cceecCCceEEeccCCCCC----HH----HHHHHHH--cCCCEEEeeeeecc
Q psy18231 10 RSTLLKNLKHCDSTLWTSK----LN----FRQLVRS--HNVDLCFTPMIIAD 51 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~----~~----~r~~~~~--~~~~~~~~~~~~~~ 51 (540)
+++.++||+++|||.+... .| .....++ -|+++..||.+.-.
T Consensus 11 g~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~ 62 (349)
T 3hgj_A 11 GGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVE 62 (349)
T ss_dssp TTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESS
T ss_pred CCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeec
Confidence 5788999999999997522 22 2222222 37899999976543
No 375
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.84 E-value=0.063 Score=45.10 Aligned_cols=102 Identities=12% Similarity=-0.024 Sum_probs=64.6
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCee------EEEee--cCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcC
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLL------LKTYG--GHAHEVNDATAACDSSQIASGASDKSVILWEVT 236 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~------~~~~~--~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 236 (540)
..+..++|+|+|.+-++ .+|.+.-.+..+... -..+- +-. ...++.|.|+|.+.++ .||.|.-++-.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 36779999999986666 578877777655211 11221 111 2578999999988777 56988777653
Q ss_pred CCceeEe-------ccccCCceeEEEECCCCCEEEEecCCCcEE
Q psy18231 237 TGQPVRR-------WREHASKVTCVKFNEDSSVVISGSQDNTVM 273 (540)
Q Consensus 237 ~~~~~~~-------~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 273 (540)
+.....- -+.-=..+..+.|.|+|.+.+.. |+.+.
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 3211111 01112467999999999876665 77643
No 376
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.80 E-value=1.2 Score=41.22 Aligned_cols=137 Identities=11% Similarity=0.059 Sum_probs=78.0
Q ss_pred ccEEEEEecC-CeeEeeeCCCeEEEEeCCCCc-eEEeee----C-CceEEEEEecC---CcEEEeecC----C----CeE
Q psy18231 379 DSITSVHVSD-HEILTASLDCRIRRYDIRTGN-LVTDYV----G-EPIVDACFTRD---CQCILTCST----D----ECL 440 (540)
Q Consensus 379 ~~v~~l~~~~-~~l~~~~~dg~i~iwd~~~~~-~~~~~~----~-~~i~~~~~sp~---~~~l~~~~~----d----g~i 440 (540)
.....+++.| ..++++..+|.|+++|. +++ .+..+. + .....++++|+ +..|+++.. + ..|
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3457888888 66888888899999974 444 222211 1 46889999997 444444332 3 567
Q ss_pred EEEecccc-------chh-hhhc---cCcCCcceEEEEecCCCCeEEEeeC-------------CCcEEEEEecCCc---
Q psy18231 441 RLFDKATG-------ELL-EEYK---GHKSGDFRIECCLDSKDSQIFCGSS-------------DGKIYKWQLVDSS--- 493 (540)
Q Consensus 441 ~i~d~~~~-------~~~-~~~~---~~~~~v~~~~~~~s~~~~~l~s~s~-------------dg~i~iwd~~~~~--- 493 (540)
..|+.... +.+ ..+. .|. ...+ +|.|||.+.++-+. .|.|.-++.. ++
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~--~~~l--~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~ 182 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHN--GGRI--RFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPA 182 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCC--CCCE--EECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCT
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcC--CceE--EECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCC
Confidence 77776543 111 1121 122 2334 89999987666432 2445555532 33
Q ss_pred -----ceeEEEecccceeeeEEEEcC-CCcEEEeec
Q psy18231 494 -----QISTLIHSVGKAVVNSLCSHP-TRKHIMSAC 523 (540)
Q Consensus 494 -----~~~~~~~~~~~~~v~~l~~s~-d~~~l~s~~ 523 (540)
....+.. ++. ....++|+| ++++.++-.
T Consensus 183 ~npf~~~~i~a~-G~r-np~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 183 DNPFPNSPIWSY-GHR-NPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp TSSSTTCCEEEE-CCS-CCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCcEEEE-ccC-CcceEEEeCCCCCEEEEec
Confidence 1122221 343 467899999 666555543
No 377
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=94.76 E-value=0.11 Score=48.51 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=62.3
Q ss_pred ceecCCceEEeccCCCCCHHHHHHHHHcCCCEEEeeeeecccccccchhhcc------------------------cccc
Q psy18231 11 STLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNN------------------------EFST 66 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~ 66 (540)
++.+++++.+|-=..=.-..++.+ .+.|++.+.+.-|+...-.-+.+-+.. .+..
T Consensus 90 Gl~f~NPvglAAG~dk~~~~~~~l-~~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~GfnN~G~d~~~~~l~~ 168 (415)
T 3i65_A 90 HLDFINPFGVAAGFDKNGVCIDSI-LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLIL 168 (415)
T ss_dssp TEEESSSEEECTTSSTTCSSHHHH-HTTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCSCBCCHHHHHHHHHH
T ss_pred CEECCCCCEECCCCCCCHHHHHHH-HHcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCCCCchhHHHHHHHHHH
Confidence 567899999985222222234444 367888887777765532111111100 0000
Q ss_pred -C---C-----CCCCEEEEEecCC-----hhHHHHHHHHhcCCCCeEeeccCCCceEEEeccccceeccc
Q psy18231 67 -S---P-----EDTPLVVQFASNN-----HDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122 (540)
Q Consensus 67 -~---~-----~~~~~~~q~~~~~-----~~~~~~~~~~~~~~~~~id~~~gc~~~~~~~~g~g~~l~~~ 122 (540)
. + ...|+++|+.++. +++++++++.+.+.+|.|++|++||... |..++.+
T Consensus 169 ~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~------Gl~~lq~ 232 (415)
T 3i65_A 169 FRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQE 232 (415)
T ss_dssp HHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------------C
T ss_pred HHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCC------CcccccC
Confidence 0 0 1356899999988 7899999999998899999999999763 4556665
No 378
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.65 E-value=2.6 Score=40.42 Aligned_cols=153 Identities=12% Similarity=0.073 Sum_probs=82.2
Q ss_pred ccEEEEEecC-CeeEeeeCCC-eEEEEeCCCCceE--Eeee--------CCceEEEEEecC---CcEEEeecC-------
Q psy18231 379 DSITSVHVSD-HEILTASLDC-RIRRYDIRTGNLV--TDYV--------GEPIVDACFTRD---CQCILTCST------- 436 (540)
Q Consensus 379 ~~v~~l~~~~-~~l~~~~~dg-~i~iwd~~~~~~~--~~~~--------~~~i~~~~~sp~---~~~l~~~~~------- 436 (540)
.....++|.| ..++++...+ .|++++..+++.. ..+. ......++|+|+ +..|.+...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3557899988 5666666665 7998887655432 2221 145679999995 444444332
Q ss_pred ------CCeEEEEecccc-------chhh-hhccCcCCcceEEEEecCCCCeEEEeeCCC--------------------
Q psy18231 437 ------DECLRLFDKATG-------ELLE-EYKGHKSGDFRIECCLDSKDSQIFCGSSDG-------------------- 482 (540)
Q Consensus 437 ------dg~i~i~d~~~~-------~~~~-~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg-------------------- 482 (540)
...|.-|+.... +.+. .+.. ...-..-.++|.|||.+.++.+..+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~ 185 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-SKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQ 185 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-CSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHH
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-CCCCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccc
Confidence 234555554321 1111 1211 1111223448999998766644311
Q ss_pred ----------cEEEEEec-CCc-----------ceeEEEecccceeeeEEEEcCCCcEEEeec--CCeeEEEEccc
Q psy18231 483 ----------KIYKWQLV-DSS-----------QISTLIHSVGKAVVNSLCSHPTRKHIMSAC--GNNVKLWTAEE 534 (540)
Q Consensus 483 ----------~i~iwd~~-~~~-----------~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~--d~~i~iw~~~~ 534 (540)
.=+||.+. +++ ....+.. +|. ....++|.|+|++.++-. ++.-.|..+..
T Consensus 186 ~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~-G~R-Np~gla~dp~G~L~~~d~g~~~~dein~i~~ 259 (454)
T 1cru_A 186 ELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL-GHR-NPQGLAFTPNGKLLQSEQGPNSDDEINLIVK 259 (454)
T ss_dssp HHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB-CCS-EEEEEEECTTSCEEEEEECSSSCEEEEECCT
T ss_pred cccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE-CCC-CcceEEECCCCCEEEEecCCCCCeEEEEecC
Confidence 11344442 333 1223331 443 578999999887666543 55555555544
No 379
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=94.58 E-value=0.043 Score=50.39 Aligned_cols=83 Identities=11% Similarity=0.051 Sum_probs=55.7
Q ss_pred ceecCCceEEeccCCCCCHHHHH-HHHHcCCCEEEeeeeecc-cccccchhhccccccCCCCCCEEEEEecCChhHHHHH
Q psy18231 11 STLLKNLKHCDSTLWTSKLNFRQ-LVRSHNVDLCFTPMIIAD-SFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFVRA 88 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~ 88 (540)
+..++.|+++|||+++|+.+|+. +++..|..++.++|.... ++++ .. .+..-|+.+|+ |..++.+..+
T Consensus 42 g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~~~~i~-------~~--~~~g~~v~v~~-g~~~~~~~~a 111 (336)
T 1ypf_A 42 KHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKRISFIR-------DM--QSRGLIASISV-GVKEDEYEFV 111 (336)
T ss_dssp TEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGHHHHHH-------HH--HHTTCCCEEEE-CCSHHHHHHH
T ss_pred CEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHHHHHHH-------HH--HhcCCeEEEeC-CCCHHHHHHH
Confidence 45678899999999999999966 466667888888774321 1111 11 11234788884 7777777666
Q ss_pred HHHhcCC--CCeEeecc
Q psy18231 89 TQYVAPH--CNGVDLNC 103 (540)
Q Consensus 89 ~~~~~~~--~~~id~~~ 103 (540)
..+++.+ .+.|.+|.
T Consensus 112 ~~~~~~g~~~~~i~i~~ 128 (336)
T 1ypf_A 112 QQLAAEHLTPEYITIDI 128 (336)
T ss_dssp HHHHHTTCCCSEEEEEC
T ss_pred HHHHhcCCCCCEEEEEC
Confidence 5566655 77877765
No 380
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.50 E-value=2.6 Score=37.85 Aligned_cols=128 Identities=12% Similarity=0.042 Sum_probs=68.6
Q ss_pred ecCCeeE-eeeCCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecCC--CeEEEEeccccchhhhhccCcCCcc
Q psy18231 386 VSDHEIL-TASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTD--ECLRLFDKATGELLEEYKGHKSGDF 462 (540)
Q Consensus 386 ~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~v~ 462 (540)
+..+.|. +......|..-++..+.....+. .... ..++|++.+|+-...+ ..|..-++.... ...+.. ..+
T Consensus 154 ~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~- 227 (302)
T 3s25_A 154 TSDRYFYYNNPKNGQLYRYDTASQSEALFYD-CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI- 227 (302)
T ss_dssp EETTEEEEECTTTCCEEEEETTTTEEEEEEC-SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE-
T ss_pred EECCEEEEEeCCCceEEEEECCCCCEEEEeC-CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc-
Confidence 3334444 33335678888877665443333 3332 3466988888765543 366666765443 223321 111
Q ss_pred eEEEEecCCCCeEEEeeC--CCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeec--CCeeEE
Q psy18231 463 RIECCLDSKDSQIFCGSS--DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC--GNNVKL 529 (540)
Q Consensus 463 ~~~~~~s~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~--d~~i~i 529 (540)
. .++|++++|+-++. .+.|..-++ +|...+.+.. . .+.. +++.+.+|+-.. .+.|..
T Consensus 228 -~--~~~~~g~~Iy~~~~~~~~~i~~~~~-DG~~r~~l~~--~--~~~~--i~i~~d~Iy~td~~~~~i~~ 288 (302)
T 3s25_A 228 -E--HYNVYGSLIFYQRGGDNPALCVVKN-DGTGFKELAK--G--EFCN--INVTSQYVYFTDFVSNKEYC 288 (302)
T ss_dssp -E--EEEEETTEEEEEECSSSCEEEEEET-TSCCCEEEEE--S--CEEE--EEECSSEEEEEETTTCCEEE
T ss_pred -c--eEEECCCEEEEEECCCCcEEEEEEC-CCCccEEeeC--C--ccce--EEEeCCEEEEEECCCCeEEE
Confidence 2 47788888876532 345655554 4555555541 1 2333 445667777665 455443
No 381
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.40 E-value=2.1 Score=43.71 Aligned_cols=107 Identities=10% Similarity=0.089 Sum_probs=60.2
Q ss_pred CCCCEEEEeeCC----CcEEEEcCCCCeeEEEe-e-----cCCc-ceeEEEEee-CCCeEEEeeCC------CeEEEEEc
Q psy18231 174 VDGSYCLTCGSD----KKIKLWNPYRNLLLKTY-G-----GHAH-EVNDATAAC-DSSQIASGASD------KSVILWEV 235 (540)
Q Consensus 174 pdg~~lat~~~d----g~i~iwd~~~~~~~~~~-~-----~h~~-~v~~l~~sp-~~~~l~s~s~d------g~i~iwd~ 235 (540)
.++..++.||.+ ..+.+||+.+++-...- . .... .-.+++..+ +++.++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 46888888776533322 1 1111 112333443 77778888754 35788898
Q ss_pred CCCceeEe--ccccCCceeEEEECCCCCEEEEecCCC--cEEEEEecCCC
Q psy18231 236 TTGQPVRR--WREHASKVTCVKFNEDSSVVISGSQDN--TVMMWDVKSRS 281 (540)
Q Consensus 236 ~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~ 281 (540)
.+.+-... +...... .+++...++..++.||.++ .+.+||+.+..
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc
Confidence 77643322 1111111 2233323777888887655 68888877654
No 382
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.36 E-value=0.071 Score=48.70 Aligned_cols=112 Identities=14% Similarity=0.201 Sum_probs=71.6
Q ss_pred CeeEeeeCCCeEEEEeCCCCceEEeeeCC---ceEEEEE--e-cCCcEEEee-cCCCeEEEEeccccchhhhhcc----C
Q psy18231 389 HEILTASLDCRIRRYDIRTGNLVTDYVGE---PIVDACF--T-RDCQCILTC-STDECLRLFDKATGELLEEYKG----H 457 (540)
Q Consensus 389 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~i~~~~~--s-p~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~----~ 457 (540)
+.+++++.||.|.-+|.++|+.+-++... ++....- . .++..++.. +.||.|+.+|..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 56899999999999999999998888653 2222110 0 133444443 6899999999887743322211 1
Q ss_pred cCCcce-EEEEe-----cCCCCeEEEeeCCCcEEEEEecCCcceeEEEe
Q psy18231 458 KSGDFR-IECCL-----DSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 500 (540)
Q Consensus 458 ~~~v~~-~~~~~-----s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 500 (540)
..+... -.... +..+..+++|+.+|.+...|+.+|+.+.++..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 111110 00000 01456889999999999999999999998863
No 383
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=94.36 E-value=0.09 Score=48.47 Aligned_cols=42 Identities=10% Similarity=-0.046 Sum_probs=28.4
Q ss_pred cceecCCceEEeccCCCCC----HH----HHHHHHHcCCCEEEeeeeecc
Q psy18231 10 RSTLLKNLKHCDSTLWTSK----LN----FRQLVRSHNVDLCFTPMIIAD 51 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~----~~----~r~~~~~~~~~~~~~~~~~~~ 51 (540)
+++.|+||+++|||.+..- .| .+...++..+++..||.+...
T Consensus 19 g~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~ 68 (361)
T 3gka_A 19 GDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERASAGLIISEATSVT 68 (361)
T ss_dssp TTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTTSSEEEEEEEESS
T ss_pred CCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHhCCEEEEcceeec
Confidence 5788999999999987532 22 333333335789999976543
No 384
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.33 E-value=3.2 Score=45.38 Aligned_cols=88 Identities=16% Similarity=0.152 Sum_probs=57.0
Q ss_pred CCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCCCceeEeccccCCceeEEEECCCCCEEE
Q psy18231 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI 264 (540)
Q Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 264 (540)
..+|.|.|+.++..+.+.. -.--+.-.+|..+.+|.-. ..+++|+|+++.+.+..+.- ..+|.-=.|-.+. .|+
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVA 120 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeE
Confidence 4478888988765442211 1123445678777666654 67999999999887776643 3456666675443 455
Q ss_pred EecCCCcEEEEEecC
Q psy18231 265 SGSQDNTVMMWDVKS 279 (540)
Q Consensus 265 s~~~dg~i~iwd~~~ 279 (540)
..+ +..|.-|++..
T Consensus 121 lVT-~~aVyHW~~~~ 134 (1630)
T 1xi4_A 121 LVT-DNAVYHWSMEG 134 (1630)
T ss_pred EEc-CCeEEEeccCC
Confidence 444 45799999965
No 385
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=94.15 E-value=0.1 Score=48.08 Aligned_cols=42 Identities=12% Similarity=-0.015 Sum_probs=28.4
Q ss_pred cceecCCceEEeccCCCC--------CHHHHHHHHHcCCCEEEeeeeecc
Q psy18231 10 RSTLLKNLKHCDSTLWTS--------KLNFRQLVRSHNVDLCFTPMIIAD 51 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~--------~~~~r~~~~~~~~~~~~~~~~~~~ 51 (540)
+.+.++||+++|||.+.. +.-.+...++..+++..||-+...
T Consensus 11 g~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~ 60 (362)
T 4ab4_A 11 GDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRASAGLILSEATSVS 60 (362)
T ss_dssp TTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTTSSEEEEEEEESS
T ss_pred CCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHhhCEEeeeeeEec
Confidence 568899999999998753 222333333335789999976543
No 386
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.73 E-value=0.54 Score=43.09 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=60.2
Q ss_pred CceEEEEEecCCcEEEeecCCCeEEEEeccccch--hhhh----ccCcCCcceEEEEecCC---CCeEEEe---eCCCcE
Q psy18231 417 EPIVDACFTRDCQCILTCSTDECLRLFDKATGEL--LEEY----KGHKSGDFRIECCLDSK---DSQIFCG---SSDGKI 484 (540)
Q Consensus 417 ~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~--~~~~----~~~~~~v~~~~~~~s~~---~~~l~s~---s~dg~i 484 (540)
.....++|.|+|+++++--..|.|++++...++. +..+ .........+ +++|+ +.+|+.. ..++.|
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGi--a~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGI--ALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEE--EECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceee--EeccccccCCEEEEEEecCCCCEE
Confidence 4567899999999877766589999998655432 1111 1112233344 89985 3444432 244566
Q ss_pred EEEEecCCc-------cee----EEEecccceeeeEEEEcCCCcEEEeec
Q psy18231 485 YKWQLVDSS-------QIS----TLIHSVGKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 485 ~iwd~~~~~-------~~~----~~~~~~~~~~v~~l~~s~d~~~l~s~~ 523 (540)
.-|.+..+. ... .+.. .....-..|+|.|||.+.++.+
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~-~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPK-GVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECC-CSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCC-CCCccCccccCCCCCCEEEEEC
Confidence 666655421 111 1211 1122356799999998777754
No 387
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.54 E-value=4 Score=36.60 Aligned_cols=123 Identities=10% Similarity=0.018 Sum_probs=66.6
Q ss_pred EEecCCeeEeee----CCCeEEEEeCCCCceEEeeeCCceEEEEEecCCcEEEeecC-CCeEEEEeccccchhhhhccCc
Q psy18231 384 VHVSDHEILTAS----LDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCST-DECLRLFDKATGELLEEYKGHK 458 (540)
Q Consensus 384 l~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~ 458 (540)
++...+.|+-.. .+..|...+++... ...+..+.+ ..++|+++.|+-.+. ...|...++..+.....+.+
T Consensus 111 ~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~-- 185 (302)
T 3s25_A 111 ASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC-- 185 (302)
T ss_dssp EEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--
T ss_pred EEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--
Confidence 333445555443 34456666666433 334444333 456888888775554 67888888766543322322
Q ss_pred CCcceEEEEecCCCCeEEEeeCCC--cEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEee
Q psy18231 459 SGDFRIECCLDSKDSQIFCGSSDG--KIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522 (540)
Q Consensus 459 ~~v~~~~~~~s~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 522 (540)
... . .++|++.+|+-...++ .|..-++. +.....+. . ..+ ..|+|++++|..+
T Consensus 186 -~~~-~--~~~P~g~~iy~t~~~~~~~I~~~~ld-G~~~~~Lt--~--~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 186 -NCY-K--PVVLDDTNVYYMDVNRDNAIVHVNIN-NPNPVVLT--E--ANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp -CEE-E--EEEEETTEEEEEEGGGTTEEEEECSS-SCCCEECS--C--SCE--EEEEEETTEEEEE
T ss_pred -Ccc-c--eeeecCCEEEEEEcCCCcEEEEEECC-CCCeEEEe--C--CCc--ceEEECCCEEEEE
Confidence 211 2 3558898888665443 45555544 33334443 1 122 2367777777765
No 388
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=93.50 E-value=0.0093 Score=51.15 Aligned_cols=77 Identities=14% Similarity=0.047 Sum_probs=48.1
Q ss_pred eEEeccCCCCCHHHHHHHH---HcCCCE--EEeeeeec-ccccccchhhccccccCCCCCCEEEEEecCChhHHHHHHHH
Q psy18231 18 KHCDSTLWTSKLNFRQLVR---SHNVDL--CFTPMIIA-DSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFVRATQY 91 (540)
Q Consensus 18 ~~~ap~~~~~~~~~r~~~~---~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~ 91 (540)
..|.|+ .|+.+||++|+ +||++. ++.+|+.. .+.++ + ..... --+.|+..|+.++.+..+.+ .
T Consensus 11 t~l~p~--~t~~~i~~l~~~a~~~g~~~v~v~~~~v~~~~~~l~-~---v~v~~--v~~~P~g~~~~~~k~~~~~~---A 79 (225)
T 1mzh_A 11 AALKPH--LSEKEIEEFVLKSEELGIYAVCVNPYHVKLASSIAK-K---VKVCC--VIGFPLGLNKTSVKVKEAVE---A 79 (225)
T ss_dssp EECCTT--CCHHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHCS-S---SEEEE--EESTTTCCSCHHHHHHHHHH---H
T ss_pred cccCCC--CCHHHHHHHHHHHHHhCCeEEEECHHHHHHHHHHhc-C---Cceee--EecCCCCccchhhhHHHHHH---H
Confidence 457888 69999999999 789877 56667654 34443 1 11111 11345555555544444333 3
Q ss_pred hcCCCCeEe--eccCC
Q psy18231 92 VAPHCNGVD--LNCGC 105 (540)
Q Consensus 92 ~~~~~~~id--~~~gc 105 (540)
++.+.+.|| +|.||
T Consensus 80 ~~~Gad~Id~viN~g~ 95 (225)
T 1mzh_A 80 VRDGAQELDIVWNLSA 95 (225)
T ss_dssp HHTTCSEEEEECCHHH
T ss_pred HHcCCCEEEEEecHHH
Confidence 456889999 89988
No 389
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=93.43 E-value=0.088 Score=49.13 Aligned_cols=42 Identities=14% Similarity=0.021 Sum_probs=29.2
Q ss_pred cceecCCceEEeccCCC--------CCHHHHHHHHHc--CCCEEEeeeeecc
Q psy18231 10 RSTLLKNLKHCDSTLWT--------SKLNFRQLVRSH--NVDLCFTPMIIAD 51 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~--------~~~~~r~~~~~~--~~~~~~~~~~~~~ 51 (540)
+.+.|++|+++|||.+. |+.-.+...++. |+++..||.+...
T Consensus 21 g~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~ 72 (407)
T 3tjl_A 21 GNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVS 72 (407)
T ss_dssp TTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESS
T ss_pred CCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEEC
Confidence 46889999999999864 333334444443 6899999976543
No 390
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.01 E-value=1.3 Score=42.47 Aligned_cols=105 Identities=11% Similarity=0.018 Sum_probs=62.0
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCee--EEEeec------CCcceeEEEEeeC---CCeEE-EeeC------
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLL--LKTYGG------HAHEVNDATAACD---SSQIA-SGAS------ 226 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~--~~~~~~------h~~~v~~l~~sp~---~~~l~-s~s~------ 226 (540)
.....|+|.|||+++++-...+.|++++..+++. +..+.. .......|+|+|+ +..|. +-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 4567999999998776654334788888655543 222321 2456779999995 44444 4332
Q ss_pred ------CCeEEEEEcCCC-------ceeE-ecc-ccCCceeEEEECCCCCEEEEecCC
Q psy18231 227 ------DKSVILWEVTTG-------QPVR-RWR-EHASKVTCVKFNEDSSVVISGSQD 269 (540)
Q Consensus 227 ------dg~i~iwd~~~~-------~~~~-~~~-~h~~~v~~~~~~~~~~~l~s~~~d 269 (540)
...|.-+++..+ +.+. .+. ........|.|.|||.+.++.+..
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQ 164 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCT
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCC
Confidence 234555555332 1111 122 122347899999999877766543
No 391
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=91.70 E-value=0.42 Score=44.29 Aligned_cols=42 Identities=10% Similarity=-0.014 Sum_probs=28.8
Q ss_pred cceecCCceEEeccCCCC-------CHHHHHHHHH--cCCCEEEeeeeecc
Q psy18231 10 RSTLLKNLKHCDSTLWTS-------KLNFRQLVRS--HNVDLCFTPMIIAD 51 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~-------~~~~r~~~~~--~~~~~~~~~~~~~~ 51 (540)
+++.++||+++|||.+.. +.-.....++ -|+++..||.+.-.
T Consensus 11 g~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~ 61 (363)
T 3l5l_A 11 KDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVA 61 (363)
T ss_dssp TTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESS
T ss_pred CCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeC
Confidence 578899999999999753 3323222222 37899999986543
No 392
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.64 E-value=9.8 Score=36.47 Aligned_cols=107 Identities=12% Similarity=0.046 Sum_probs=62.9
Q ss_pred ecCeEEEEeCCCCC-EEEEeeCCCcEEEEcCCCC---eeEEEee---------cCCcceeEEEEeeC----CCeEEEeeC
Q psy18231 164 LSGLMHTRFPVDGS-YCLTCGSDKKIKLWNPYRN---LLLKTYG---------GHAHEVNDATAACD----SSQIASGAS 226 (540)
Q Consensus 164 ~~~v~~v~~spdg~-~lat~~~dg~i~iwd~~~~---~~~~~~~---------~h~~~v~~l~~sp~----~~~l~s~s~ 226 (540)
...-..|+|.|||. .|+++...|.|++++.... ..+..+. ........|+|+|+ +.+.++-+.
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 35567899999996 5566678899999975322 1222221 11456789999995 444444332
Q ss_pred --C----------CeEEEEEcCCC----------ceeEecc--ccCCceeEEEECCCCCEEEEecCCC
Q psy18231 227 --D----------KSVILWEVTTG----------QPVRRWR--EHASKVTCVKFNEDSSVVISGSQDN 270 (540)
Q Consensus 227 --d----------g~i~iwd~~~~----------~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg 270 (540)
+ ..|.-|.+..+ +.+..+. .....-..|.|.|||.+.++.+..+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13444655421 1222221 1223467899999998777766543
No 393
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.14 E-value=2.5 Score=40.63 Aligned_cols=106 Identities=8% Similarity=0.076 Sum_probs=56.4
Q ss_pred CceEEEEEecCCc-EEEeecCCCeEEEEeccccc---hhhh----hc-c----CcCCcceEEEEecCC----CCeEEEee
Q psy18231 417 EPIVDACFTRDCQ-CILTCSTDECLRLFDKATGE---LLEE----YK-G----HKSGDFRIECCLDSK----DSQIFCGS 479 (540)
Q Consensus 417 ~~i~~~~~sp~~~-~l~~~~~dg~i~i~d~~~~~---~~~~----~~-~----~~~~v~~~~~~~s~~----~~~l~s~s 479 (540)
.....|+|.|+|. .|+++...|.|++++..... .+.. +. + ..... +.++++|+ +.+.++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gl--lgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGL--LSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSE--EEEEECTTHHHHCEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcc--eeeEeCCCCcCCCEEEEEEe
Confidence 3567889999985 44555678899999743221 1111 11 0 02223 34488886 43333332
Q ss_pred C--C----------CcEEEEEecCC----------cceeEEEecccceeeeEEEEcCCCcEEEeecC
Q psy18231 480 S--D----------GKIYKWQLVDS----------SQISTLIHSVGKAVVNSLCSHPTRKHIMSACG 524 (540)
Q Consensus 480 ~--d----------g~i~iwd~~~~----------~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d 524 (540)
. + ..|.-|.+..+ +.+..+........-..|+|.|||.+.++.+|
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 2 1 13444555421 22223321122234678999999988887663
No 394
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=90.91 E-value=0.31 Score=44.71 Aligned_cols=44 Identities=7% Similarity=-0.042 Sum_probs=34.6
Q ss_pred cceecCCceEEeccCCCCCHHHHHHHHHcCCCEEEeeeeecccc
Q psy18231 10 RSTLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSF 53 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 53 (540)
+++.++.|+++|||.++|+.++...+.+.|+-.+...+.+..++
T Consensus 37 ~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~ 80 (361)
T 3r2g_A 37 GKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEEN 80 (361)
T ss_dssp SSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHH
T ss_pred CCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHH
Confidence 45668889999999999999999999999875555555444333
No 395
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=90.70 E-value=0.99 Score=41.68 Aligned_cols=96 Identities=9% Similarity=0.021 Sum_probs=56.3
Q ss_pred ceecCCceEEeccCC-C-CCHHHHHHHHHcCCCEEEeeeeecccccccchhhc----------------------ccc--
Q psy18231 11 STLLKNLKHCDSTLW-T-SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARN----------------------NEF-- 64 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~-~-~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~-- 64 (540)
++.+++++.+|. | + .+.-+-..+...|++.+.+--++.....-+.+-+. ..+
T Consensus 43 Gl~f~NPvglAa--G~~~~~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~G~~n~G~~~~~~~~~~ 120 (354)
T 3tjx_A 43 NNTFANPFMNAA--GVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAE 120 (354)
T ss_dssp TEEESSSEEECT--TSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHH
T ss_pred CEEcCCCcEEcc--CCCCCCHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEcccccccccccCCHHHHHHHHHHHH
Confidence 566899999994 4 2 23444444555677666665555443211111110 001
Q ss_pred ccCCCCCCEEEEEecCChhHHHHHHHHh----cCCCCeEeeccCCCce
Q psy18231 65 STSPEDTPLVVQFASNNHDDFVRATQYV----APHCNGVDLNCGCPQR 108 (540)
Q Consensus 65 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~----~~~~~~id~~~gc~~~ 108 (540)
.....+.|+++++.+.++++.++.++.+ .++.+.|++|.+||..
T Consensus 121 ~~~~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~ 168 (354)
T 3tjx_A 121 QHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNV 168 (354)
T ss_dssp TCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC----
T ss_pred hhccCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCC
Confidence 1124467899999999998877765543 3467899999999964
No 396
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.67 E-value=8.5 Score=34.01 Aligned_cols=122 Identities=12% Similarity=0.034 Sum_probs=59.6
Q ss_pred cEEEEEecCCeeEeeeCCCeEEEEeCCCCceEE--eeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhccC
Q psy18231 380 SITSVHVSDHEILTASLDCRIRRYDIRTGNLVT--DYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 457 (540)
Q Consensus 380 ~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 457 (540)
.|..++......+.-. ||.+..|-......+. ......|..++-..+.. ++. .||.|+.|-....-.+..-...
T Consensus 142 ~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p~~~ 217 (282)
T 3qhy_B 142 GVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVPTEA 217 (282)
T ss_dssp SEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCCGGG
T ss_pred CeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCCccc
Confidence 4666666553333334 7999999765422111 11124566666544433 333 5899999965432111110111
Q ss_pred cCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCC
Q psy18231 458 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 516 (540)
Q Consensus 458 ~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~ 516 (540)
...+..+ +-... ..++.. ||.|+.|-.....++.. ...|.+++-....
T Consensus 218 ~~~v~~i--~~G~~-h~~al~--~g~v~~wG~n~~gq~~v------~~~v~~iaaG~~h 265 (282)
T 3qhy_B 218 LSGVSAI--ASGEW-YSLALK--NGKVIAWGSSRTAPSSV------QSGVSSIEAGPNA 265 (282)
T ss_dssp GSSCCEE--EECSS-CEEEEE--TTEEEEESTTCCCCGGG------SSCEEEEEECSSC
T ss_pred CCCceEE--EcCCC-EEEEEE--CCEEEEecCCCCccccC------CCCcEEEEECcCe
Confidence 1235555 22222 233333 99999997554433221 2245555554433
No 397
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=87.79 E-value=14 Score=32.60 Aligned_cols=142 Identities=8% Similarity=0.019 Sum_probs=71.8
Q ss_pred ccEEEEEecCCeeEeeeCCCeEEEEeCCCC-ceE-EeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccccchhhhhcc
Q psy18231 379 DSITSVHVSDHEILTASLDCRIRRYDIRTG-NLV-TDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 456 (540)
Q Consensus 379 ~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~-~~~-~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 456 (540)
..|..++......+.-. ||.|..|-.... ++- .......|..++...+...++ . ||.|+.|-....-.+..-..
T Consensus 102 ~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~~gqlg~p~~ 177 (282)
T 3qhy_B 102 SGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAV--K-NGGVIAWGDNYFGQTTVPAE 177 (282)
T ss_dssp SSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--E-TTEEEEEECCTTSTTSCCGG
T ss_pred CCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEE--E-CCEEEEecCCCCCCCCCcee
Confidence 35777777775544455 999999976542 211 111124566665544333222 3 68898886543222111111
Q ss_pred CcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEeecCCeeEEEEcc
Q psy18231 457 HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533 (540)
Q Consensus 457 ~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~d~~i~iw~~~ 533 (540)
-...+..+ +... ...++. .||.|+.|-......+..-. .....|..++-......+++ ||.|..|-..
T Consensus 178 ~~~~v~~i--~~G~-~hs~al--~~G~v~~wG~n~~gqlg~p~--~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n 245 (282)
T 3qhy_B 178 AQSGVDDV--AGGI-FHSLAL--KDGKVIAWGDNRYKQTTVPT--EALSGVSAIASGEWYSLALK--NGKVIAWGSS 245 (282)
T ss_dssp GGSSEEEE--EECS-SEEEEE--ETTEEEEEECCTTSTTCCCG--GGGSSCCEEEECSSCEEEEE--TTEEEEESTT
T ss_pred cCCCeEEE--EecC-CEEEEE--ECCeEEEEECCCCCCCCCCc--ccCCCceEEEcCCCEEEEEE--CCEEEEecCC
Confidence 12334444 2222 223444 59999999765432222111 12234666665544444334 7777777543
No 398
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.20 E-value=2.2 Score=41.32 Aligned_cols=106 Identities=12% Similarity=0.061 Sum_probs=68.5
Q ss_pred eeeecCeEEEEeCCCCCEEEEeeC-CCcEEEEcCCCC------ee-------EEEeecCCcceeEEEEeeCCCeEEEeeC
Q psy18231 161 LFVLSGLMHTRFPVDGSYCLTCGS-DKKIKLWNPYRN------LL-------LKTYGGHAHEVNDATAACDSSQIASGAS 226 (540)
Q Consensus 161 ~~h~~~v~~v~~spdg~~lat~~~-dg~i~iwd~~~~------~~-------~~~~~~h~~~v~~l~~sp~~~~l~s~s~ 226 (540)
+.-......+..+|||++++.++. +.++.++|+++. +. ..... -.-.-...+|.++|.-..|---
T Consensus 319 iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 319 VPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp EEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETT
T ss_pred EeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeee
Confidence 344566778899999999886654 789999997642 11 22233 2345567899999965566668
Q ss_pred CCeEEEEEcCCC----------ceeEeccccCCceeEEE-----ECCCCCEEEEec
Q psy18231 227 DKSVILWEVTTG----------QPVRRWREHASKVTCVK-----FNEDSSVVISGS 267 (540)
Q Consensus 227 dg~i~iwd~~~~----------~~~~~~~~h~~~v~~~~-----~~~~~~~l~s~~ 267 (540)
|..|.-|++... ..+..+.-|-.+-.-.+ -.++|++|++..
T Consensus 398 dSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 398 DSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp TTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred cceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999999999653 23334443333222111 145788888764
No 399
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=86.56 E-value=0.61 Score=43.88 Aligned_cols=39 Identities=3% Similarity=-0.192 Sum_probs=33.2
Q ss_pred cceecCCceEEeccCCCCCHHHHHHHHHcCC-CEEEeeee
Q psy18231 10 RSTLLKNLKHCDSTLWTSKLNFRQLVRSHNV-DLCFTPMI 48 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~-~~~~~~~~ 48 (540)
....++.|+++|||+++++.++.+.+.+.|+ .+..++|+
T Consensus 62 ~g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~ 101 (393)
T 2qr6_A 62 DAYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGL 101 (393)
T ss_dssp TTEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSS
T ss_pred cccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecce
Confidence 3566789999999999999999999999865 77888774
No 400
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=86.53 E-value=1.7 Score=40.06 Aligned_cols=88 Identities=9% Similarity=0.027 Sum_probs=51.5
Q ss_pred eecceecCCceEEeccCCCCCHHHHHHHHH-cCCCEEEeeeeecccccccchhhccccccCCCCCCEEEEEecCChhHHH
Q psy18231 8 FNRSTLLKNLKHCDSTLWTSKLNFRQLVRS-HNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFV 86 (540)
Q Consensus 8 ~~~~~~~~~~~~~ap~~~~~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~ 86 (540)
+.+.+.++.+++.|||.++|+..+...+.+ -|.++... ..+..+..+ ..+.+. .....|+.+.+..+. ..
T Consensus 38 l~~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~-~~s~e~~~~----~I~~vk-~~~~~pvga~ig~~~---~e 108 (361)
T 3khj_A 38 LTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHK-NMDMESQVN----EVLKVK-NSGGLRVGAAIGVNE---IE 108 (361)
T ss_dssp SSSSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECS-SSCHHHHHH----HHHHHH-HTTCCCCEEEECTTC---HH
T ss_pred cccccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEec-CCCHHHHHH----HHHHHH-hccCceEEEEeCCCH---HH
Confidence 334567788999999999999999985444 45565543 222222221 111111 123467888886655 22
Q ss_pred HHHHHhcCCCCeEeeccC
Q psy18231 87 RATQYVAPHCNGVDLNCG 104 (540)
Q Consensus 87 ~~~~~~~~~~~~id~~~g 104 (540)
.+..+++.+.+.|.++..
T Consensus 109 ~a~~l~eaGad~I~ld~a 126 (361)
T 3khj_A 109 RAKLLVEAGVDVIVLDSA 126 (361)
T ss_dssp HHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHcCcCeEEEeCC
Confidence 333345567788866643
No 401
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=86.50 E-value=1.6 Score=41.18 Aligned_cols=43 Identities=2% Similarity=-0.188 Sum_probs=32.1
Q ss_pred ceecCCceEEeccCCCCCHHHHHHHHHcCCCEEEeeeeecccc
Q psy18231 11 STLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSF 53 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 53 (540)
...++.++++|||+++++..+...+.+.|+--+..-+++..++
T Consensus 38 g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~~~~s~e~~ 80 (404)
T 1eep_A 38 NISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQ 80 (404)
T ss_dssp SCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHH
T ss_pred CcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHH
Confidence 5667889999999999999999999988763333334444433
No 402
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=84.04 E-value=1.2 Score=41.10 Aligned_cols=41 Identities=7% Similarity=-0.071 Sum_probs=30.0
Q ss_pred cceecCCceEEeccCCC--------CCHHHHHHHHHcCCCEEEeeeeec
Q psy18231 10 RSTLLKNLKHCDSTLWT--------SKLNFRQLVRSHNVDLCFTPMIIA 50 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~--------~~~~~r~~~~~~~~~~~~~~~~~~ 50 (540)
+++.++||+++|||... |+.-.+...++.++++..||.+..
T Consensus 11 g~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~gGliite~~~V 59 (358)
T 4a3u_A 11 GAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRASAGLIISEATGI 59 (358)
T ss_dssp TTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSSSEEEEEEES
T ss_pred CCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcCCCEEEEeeeEE
Confidence 57899999999999753 444455555555789999997554
No 403
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=83.49 E-value=42 Score=34.21 Aligned_cols=109 Identities=6% Similarity=-0.047 Sum_probs=58.3
Q ss_pred EEecCCcEEEee----------cCCCeEEEEeccccc-------hhhhhccCcCCcceEEEEecCCCCeEEEeeCCCc--
Q psy18231 423 CFTRDCQCILTC----------STDECLRLFDKATGE-------LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGK-- 483 (540)
Q Consensus 423 ~~sp~~~~l~~~----------~~dg~i~i~d~~~~~-------~~~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~-- 483 (540)
..++++.+++.. ...+.|...|+.++. ....+-.+......-.+.+..+ .++++...++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~ 373 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAK 373 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEE
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEE
Confidence 345566665532 136778888987652 1222222333222233366654 56777777764
Q ss_pred EEEEEecCCc-ceeE-EEecccceeeeEEEEcCCCcEE-Eeec----CCeeEEEEcc
Q psy18231 484 IYKWQLVDSS-QIST-LIHSVGKAVVNSLCSHPTRKHI-MSAC----GNNVKLWTAE 533 (540)
Q Consensus 484 i~iwd~~~~~-~~~~-~~~~~~~~~v~~l~~s~d~~~l-~s~~----d~~i~iw~~~ 533 (540)
|+++|+.+++ .... +.. ...+.+.....++++..+ ++.+ -..+..+++.
T Consensus 374 l~~~~~~~g~~~~~~~i~l-p~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 374 VVTFTLENEQWTKPVVLKL-PYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEECEETTEECCCEEECC-CSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCCCceEEEeccCC-CCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 6777777765 2334 332 113456667777776543 3322 2466666654
No 404
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.78 E-value=19 Score=38.26 Aligned_cols=37 Identities=19% Similarity=0.048 Sum_probs=31.4
Q ss_pred eEEEEecCCCCeEEEeeCCCcEEEEEecCCcceeEEE
Q psy18231 463 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 463 ~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 499 (540)
.++.+..++..++++-+.|+++|+|++.+++++.+..
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3444677888899999999999999999999888764
No 405
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=80.20 E-value=2.1 Score=40.22 Aligned_cols=42 Identities=5% Similarity=-0.108 Sum_probs=28.6
Q ss_pred cceecCCceEEeccCCC--------C--CHHHHHHHHHc--CCCEEEeeeeecc
Q psy18231 10 RSTLLKNLKHCDSTLWT--------S--KLNFRQLVRSH--NVDLCFTPMIIAD 51 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~--------~--~~~~r~~~~~~--~~~~~~~~~~~~~ 51 (540)
+++.|+||+++|||.+. + ++..+...++. |+++..||.+...
T Consensus 24 g~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~ 77 (400)
T 4gbu_A 24 GNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFIS 77 (400)
T ss_dssp TTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESS
T ss_pred CCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEEC
Confidence 46889999999999753 2 22333333443 6899999986543
No 406
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=79.73 E-value=38 Score=31.27 Aligned_cols=135 Identities=13% Similarity=0.137 Sum_probs=78.0
Q ss_pred eEEEEeCCCC--ceEEeeeC--------CceEEEEEe---cC----CcEEEeec-CCCeEEEEeccccchhhhhccC---
Q psy18231 399 RIRRYDIRTG--NLVTDYVG--------EPIVDACFT---RD----CQCILTCS-TDECLRLFDKATGELLEEYKGH--- 457 (540)
Q Consensus 399 ~i~iwd~~~~--~~~~~~~~--------~~i~~~~~s---p~----~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~--- 457 (540)
+|.+||+.+. +.++.+.- ..+..+.+. |+ +.++.... ..+.|.++|+.+++..+.+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5788999998 88777642 357888887 22 34444433 4678999999987654333111
Q ss_pred ---------------cCCcceEEEEecCC----CCeEEEeeCCCcEEEEEec-----CC---cceeEEEecccceeeeEE
Q psy18231 458 ---------------KSGDFRIECCLDSK----DSQIFCGSSDGKIYKWQLV-----DS---SQISTLIHSVGKAVVNSL 510 (540)
Q Consensus 458 ---------------~~~v~~~~~~~s~~----~~~l~s~s~dg~i~iwd~~-----~~---~~~~~~~~~~~~~~v~~l 510 (540)
...+..+ +.+|+ +++|+-....+. ++|.+. +. ..++.+-..+....-..+
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gI--aLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGI--TLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEE--EECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEE
T ss_pred ccCcceEECCEEeEeccCceEE--EecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceE
Confidence 0122333 67777 667666654442 344432 22 222223211111233456
Q ss_pred EEc-CCCcEEEeec-CCeeEEEEccc-cc
Q psy18231 511 CSH-PTRKHIMSAC-GNNVKLWTAEE-DY 536 (540)
Q Consensus 511 ~~s-~d~~~l~s~~-d~~i~iw~~~~-~~ 536 (540)
++. .+|.++++-- .+.|..|+..+ .+
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~~~~ 309 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQKMPL 309 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTSCSB
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCCCcc
Confidence 675 5676666666 89999999987 55
No 407
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=76.12 E-value=3.1 Score=38.59 Aligned_cols=41 Identities=7% Similarity=-0.023 Sum_probs=28.9
Q ss_pred cceecCCceEEeccCCCC-----CHHH-----HHHHHHcCCCEEEeeeeec
Q psy18231 10 RSTLLKNLKHCDSTLWTS-----KLNF-----RQLVRSHNVDLCFTPMIIA 50 (540)
Q Consensus 10 ~~~~~~~~~~~ap~~~~~-----~~~~-----r~~~~~~~~~~~~~~~~~~ 50 (540)
+++.|+||+++|||.+.. ..|- +...++.|+++..||-+..
T Consensus 14 g~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA~~GLIite~~~v 64 (379)
T 3aty_A 14 GRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMV 64 (379)
T ss_dssp TTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTTTSSEEEEEEEES
T ss_pred CCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHhCCCeEEECceec
Confidence 578899999999998653 2333 3333344899999997654
No 408
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.21 E-value=13 Score=39.39 Aligned_cols=38 Identities=16% Similarity=0.126 Sum_probs=33.6
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEe
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY 202 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~ 202 (540)
..+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35778888889999999999999999999999988875
No 409
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=70.62 E-value=67 Score=29.68 Aligned_cols=44 Identities=11% Similarity=0.229 Sum_probs=24.8
Q ss_pred EecCC-CCeEEEeeCCCcEEEEEecCCcceeEEEecccceeeeEEEEc
Q psy18231 467 CLDSK-DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 513 (540)
Q Consensus 467 ~~s~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 513 (540)
+++|. ...|+.++.++.|+.-+ ..++.-..+. .+-..+.+++|.
T Consensus 347 ~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~--~~lp~~~~v~~~ 391 (394)
T 3b7f_A 347 TADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIA--SHLPHIYAVQSA 391 (394)
T ss_dssp EECCSSSCCEEEECTTSCEEEES-STTSBCEEEE--CSCSCEEEEEEE
T ss_pred EECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcc--cCCCCeeEEEEe
Confidence 67664 34577776666655432 3455555554 344457777764
No 410
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=68.12 E-value=75 Score=29.31 Aligned_cols=93 Identities=8% Similarity=-0.029 Sum_probs=45.3
Q ss_pred EEEEeeCCCcEEEEcCCC-CeeEEEe--ecCCcceeEEEEee-CCCeEEEeeCCC----eEEEEEcCCCceeEeccc---
Q psy18231 178 YCLTCGSDKKIKLWNPYR-NLLLKTY--GGHAHEVNDATAAC-DSSQIASGASDK----SVILWEVTTGQPVRRWRE--- 246 (540)
Q Consensus 178 ~lat~~~dg~i~iwd~~~-~~~~~~~--~~h~~~v~~l~~sp-~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~--- 246 (540)
.|.+|...| +.+++... +..-..+ ......|.+|++.| +...|..++..| .|... ...++.-..+..
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPA 101 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCcccc
Confidence 566777666 44554332 2222111 12346799999998 333444444444 33322 223332222211
Q ss_pred -----------cCCceeEEEECC-C-CCEEEEecCCCcE
Q psy18231 247 -----------HASKVTCVKFNE-D-SSVVISGSQDNTV 272 (540)
Q Consensus 247 -----------h~~~v~~~~~~~-~-~~~l~s~~~dg~i 272 (540)
+...|.++++.| + ...++.++..+.|
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl 140 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGL 140 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEE
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcE
Confidence 112577888886 2 4556666555543
No 411
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=66.58 E-value=81 Score=29.10 Aligned_cols=106 Identities=8% Similarity=0.062 Sum_probs=57.6
Q ss_pred CceEEEEEecC----CcEEEeecCCCeEEEEecccc-----chhhhh--ccCcCC-cceEEEEec-CCCCeEEEeeCCCc
Q psy18231 417 EPIVDACFTRD----CQCILTCSTDECLRLFDKATG-----ELLEEY--KGHKSG-DFRIECCLD-SKDSQIFCGSSDGK 483 (540)
Q Consensus 417 ~~i~~~~~sp~----~~~l~~~~~dg~i~i~d~~~~-----~~~~~~--~~~~~~-v~~~~~~~s-~~~~~l~s~s~dg~ 483 (540)
..+..+++||+ ++.|.-....+ -++|.+.+. .....+ .+..++ ..+...++. .+|.++++--..+.
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~a 298 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQ 298 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSE
T ss_pred cCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCe
Confidence 35777888886 56666554433 233333221 111111 112221 223334675 67777777778889
Q ss_pred EEEEEecC-C---cceeEEEecccceeeeEEEEcCCCcEEEeec
Q psy18231 484 IYKWQLVD-S---SQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 523 (540)
Q Consensus 484 i~iwd~~~-~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~ 523 (540)
|..|+..+ . +....+.....-..+..+.+.++|.+.+.+.
T Consensus 299 I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 299 VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 99999764 1 2334443222334577888888887666553
No 412
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.28 E-value=26 Score=34.68 Aligned_cols=59 Identities=15% Similarity=0.156 Sum_probs=42.9
Q ss_pred CeEEEEeCCCCCEEEEeeCC------------CcEEEEcCCCCeeEEEeecC-CcceeEEEEeeCCCeEEEe
Q psy18231 166 GLMHTRFPVDGSYCLTCGSD------------KKIKLWNPYRNLLLKTYGGH-AHEVNDATAACDSSQIASG 224 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~d------------g~i~iwd~~~~~~~~~~~~h-~~~v~~l~~sp~~~~l~s~ 224 (540)
..--|+|+|+|++++.-..+ ..+.+.+..+++....+.++ ..+++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45678999999866643221 24666677788877766654 4789999999999887765
No 413
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=61.58 E-value=19 Score=33.16 Aligned_cols=33 Identities=6% Similarity=-0.063 Sum_probs=26.0
Q ss_pred eecceecCCceEEeccCCCCCHHHHHHHHHcCC
Q psy18231 8 FNRSTLLKNLKHCDSTLWTSKLNFRQLVRSHNV 40 (540)
Q Consensus 8 ~~~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~ 40 (540)
+.+.+.++.|++.|||.++|+..+-..+.+.|.
T Consensus 39 lt~~~~l~~Pii~apM~~vs~~~lA~avA~aGG 71 (366)
T 4fo4_A 39 LTKNIALNIPMVSASMDTVTEARLAIALAQEGG 71 (366)
T ss_dssp EETTEEESSSEEECCCTTTCSHHHHHHHHHTTC
T ss_pred cccccccCCCEEeCCCCCCChHHHHHHHHHcCC
Confidence 445667888999999999999888766666654
No 414
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.83 E-value=31 Score=34.15 Aligned_cols=56 Identities=9% Similarity=0.061 Sum_probs=38.7
Q ss_pred EEecCCCCeEEEeeCC------------CcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEee
Q psy18231 466 CCLDSKDSQIFCGSSD------------GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522 (540)
Q Consensus 466 ~~~s~~~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 522 (540)
++|++.|++++.-..+ +.+.+.+..+++....+.. .-...++.++|+||++.|+..
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcCeeECCCCCEEEEE
Confidence 4899999876654432 2355556566666555553 356789999999999888764
No 415
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=59.05 E-value=91 Score=27.18 Aligned_cols=100 Identities=13% Similarity=0.141 Sum_probs=56.5
Q ss_pred CeeEeeeCCCeEEEEeCCC---------CceEEeee-CCceEEEEEecCCcEEEeecCCCeEEEEeccccch-------h
Q psy18231 389 HEILTASLDCRIRRYDIRT---------GNLVTDYV-GEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL-------L 451 (540)
Q Consensus 389 ~~l~~~~~dg~i~iwd~~~---------~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~-------~ 451 (540)
+.++..+..|.+..++... |.....+. ++.|..+...+++..++..+..|.++...+..... +
T Consensus 128 ~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv 207 (276)
T 3no0_A 128 THILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGT 207 (276)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCE
T ss_pred CEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcce
Confidence 5677777888877775431 11222232 35677766666677888889999998887654322 1
Q ss_pred hhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEE--EEecC
Q psy18231 452 EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK--WQLVD 491 (540)
Q Consensus 452 ~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~i--wd~~~ 491 (540)
..+ ...+.+..+ ....++..++..+.+|.+.. ++..+
T Consensus 208 ~~i-~~~~~lv~~--~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 208 EVS-GTKDTLVDL--IPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp ECC-CSSSCEEEE--EEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEE-cCCCcEEEE--EEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 112 122223222 12223345666677777766 76543
No 416
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.74 E-value=83 Score=34.24 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=26.9
Q ss_pred ceeEEEECCCCCEEEEecCCCcEEEEEecCCC
Q psy18231 250 KVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 281 (540)
.+.+++..++..++++-+.|+++|+|++.+++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 44556666788899999999999999999886
No 417
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.41 E-value=43 Score=32.83 Aligned_cols=62 Identities=13% Similarity=0.147 Sum_probs=44.9
Q ss_pred ecCeEEEEeCCCCCEEEEeeC------------CCcEEEEcCCCCeeEEEeecC-CcceeEEEEeeCCCeEEEee
Q psy18231 164 LSGLMHTRFPVDGSYCLTCGS------------DKKIKLWNPYRNLLLKTYGGH-AHEVNDATAACDSSQIASGA 225 (540)
Q Consensus 164 ~~~v~~v~~spdg~~lat~~~------------dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~sp~~~~l~s~s 225 (540)
......|.|.++|.+.+.... ...+..++..+++....+.+. ...++.++|+||++.|+.+-
T Consensus 475 fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred cCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 356778999999987763211 125777788788876666543 46789999999999887764
No 418
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.67 E-value=40 Score=33.04 Aligned_cols=56 Identities=7% Similarity=0.046 Sum_probs=37.5
Q ss_pred EEecCCCCeEEEeeC------------CCcEEEEEecCCcceeEEEecccceeeeEEEEcCCCcEEEee
Q psy18231 466 CCLDSKDSQIFCGSS------------DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522 (540)
Q Consensus 466 ~~~s~~~~~l~s~s~------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 522 (540)
++|+++|.+.++... .+.|+.++..+++....+.. .....++.++|+||++.|..+
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~-P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC-CCCccccCCEECCCCCEEEEE
Confidence 378999987663321 12566666666765554541 234679999999999988765
No 419
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.91 E-value=41 Score=36.68 Aligned_cols=33 Identities=18% Similarity=0.045 Sum_probs=29.1
Q ss_pred EecCCCCeEEEeeCCCcEEEEEecCCcceeEEE
Q psy18231 467 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499 (540)
Q Consensus 467 ~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 499 (540)
+..++..++++-+.|+++|||++.+++++.+..
T Consensus 244 ~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 244 IFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp EEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 566788899999999999999999999888764
No 420
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=52.23 E-value=1.3e+02 Score=26.96 Aligned_cols=101 Identities=9% Similarity=0.095 Sum_probs=59.5
Q ss_pred CeeEeeeCCCeEEEEeCC--CC---------ceEEeee-CCceEEEEEecCCcEEEeecCCCeEEEEeccccchh-----
Q psy18231 389 HEILTASLDCRIRRYDIR--TG---------NLVTDYV-GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELL----- 451 (540)
Q Consensus 389 ~~l~~~~~dg~i~iwd~~--~~---------~~~~~~~-~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~----- 451 (540)
+.++..+..|.+..+... .- .....+. +..|.++...+++..++..+..|.++.-.+......
T Consensus 158 d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~ 237 (327)
T 3uc1_A 158 DDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGK 237 (327)
T ss_dssp CEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred CEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCC
Confidence 667778888888777665 21 1112222 356777776666778889999999988876543221
Q ss_pred --hhhc--cCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecC
Q psy18231 452 --EEYK--GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491 (540)
Q Consensus 452 --~~~~--~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~ 491 (540)
..++ .....+..+ ....++..++..+.+|.+.-++..+
T Consensus 238 G~~~~~l~~~~d~lv~~--~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 238 GVLTVMYDRRRGRLVGA--LIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CEESSCCCTTTCSEEEE--EEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred cEEEEEecCCCCeEEEE--EEeCCCccEEEEcCCCeEEEEehhh
Confidence 1121 112223222 2223445677777778877777643
No 421
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=50.47 E-value=2.2e+02 Score=28.96 Aligned_cols=92 Identities=11% Similarity=0.070 Sum_probs=48.6
Q ss_pred CCCeEEEEeCCCCc-------eEEe-eeC---CceEEEEEecCCcEEEeecCCCe--EEEEeccccc-hhhh-hccC-cC
Q psy18231 396 LDCRIRRYDIRTGN-------LVTD-YVG---EPIVDACFTRDCQCILTCSTDEC--LRLFDKATGE-LLEE-YKGH-KS 459 (540)
Q Consensus 396 ~dg~i~iwd~~~~~-------~~~~-~~~---~~i~~~~~sp~~~~l~~~~~dg~--i~i~d~~~~~-~~~~-~~~~-~~ 459 (540)
..+.|...|+.++. .... +.. ..+..+.+..+ .++++...++. +.++|+.+++ .+.. +... .+
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~ 396 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQN 396 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTT
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCe
Confidence 45667777776532 1122 222 35777888765 56666666664 6777776664 2222 2211 12
Q ss_pred CcceEEEEecCCCCe-EEEee---CCCcEEEEEec
Q psy18231 460 GDFRIECCLDSKDSQ-IFCGS---SDGKIYKWQLV 490 (540)
Q Consensus 460 ~v~~~~~~~s~~~~~-l~s~s---~dg~i~iwd~~ 490 (540)
.+... ..++++.. +++.+ .-+.++.+|+.
T Consensus 397 ~~~~~--~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 397 AIFGM--SSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp CEEEE--ECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEE--eecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 23323 44566554 44433 33567777765
No 422
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.92 E-value=26 Score=35.41 Aligned_cols=37 Identities=16% Similarity=0.439 Sum_probs=31.1
Q ss_pred ccEEEEEecCCeeEeeeCCCeEEEEeCCCCceEEeee
Q psy18231 379 DSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYV 415 (540)
Q Consensus 379 ~~v~~l~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 415 (540)
..|.++.+...++++-+.|.++|+|++++++++....
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4567777777899999999999999999999876654
No 423
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.83 E-value=27 Score=35.20 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=30.9
Q ss_pred cCeEEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeec
Q psy18231 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGG 204 (540)
Q Consensus 165 ~~v~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~ 204 (540)
..|.++.+ +..+|++-+.|.++|+||+.+++++.+..-
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34666655 467999999999999999999998887653
No 424
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=43.98 E-value=1.7e+02 Score=25.89 Aligned_cols=106 Identities=14% Similarity=0.090 Sum_probs=57.8
Q ss_pred CCCCEEEEeeCCCcEEEEcCCCCeeEE---------EeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEc---CC----
Q psy18231 174 VDGSYCLTCGSDKKIKLWNPYRNLLLK---------TYGGHAHEVNDATAACDSSQIASGASDKSVILWEV---TT---- 237 (540)
Q Consensus 174 pdg~~lat~~~dg~i~iwd~~~~~~~~---------~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~---~~---- 237 (540)
|+..++++.+.+|.|+--.+.+-+... .++. .+.+..+........|+..+..|.+.-... ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 455678888899999877654422111 1222 234444445555667777777887655544 22
Q ss_pred --CceeEe-cc-ccCCceeEEEEC---CCCCEEEEecCCCcEEEEEecCC
Q psy18231 238 --GQPVRR-WR-EHASKVTCVKFN---EDSSVVISGSQDNTVMMWDVKSR 280 (540)
Q Consensus 238 --~~~~~~-~~-~h~~~v~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~ 280 (540)
|.++.. +. .....|..+... +++.+++..+.+|.++--.+...
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~ 129 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEF 129 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGG
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHh
Confidence 222111 11 233456555432 34567888899999998887654
No 425
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=43.10 E-value=2e+02 Score=26.37 Aligned_cols=108 Identities=12% Similarity=0.051 Sum_probs=65.7
Q ss_pred eCCCCCEEEEeeCCCcEEEEcCCC---------CeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEc---CC--
Q psy18231 172 FPVDGSYCLTCGSDKKIKLWNPYR---------NLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV---TT-- 237 (540)
Q Consensus 172 ~spdg~~lat~~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~---~~-- 237 (540)
+-|+..++++.+.+|.|+--.+.+ +..-..++ ....+..+........|+..+..|.+.-+.. ..
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 346778899999999999754321 22233344 3455666666556667777777887655543 22
Q ss_pred ----CceeEe---ccccCCceeEEEECC---CCCEEEEecCCCcEEEEEecCCC
Q psy18231 238 ----GQPVRR---WREHASKVTCVKFNE---DSSVVISGSQDNTVMMWDVKSRS 281 (540)
Q Consensus 238 ----~~~~~~---~~~h~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~ 281 (540)
|..+.. +. ....|.++.... ++.+|+.++..|.++-..+....
T Consensus 82 r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~ 134 (370)
T 3l6v_A 82 SNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFA 134 (370)
T ss_dssp TTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGC
T ss_pred cccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhh
Confidence 222111 22 234555554332 35689999999999998876654
No 426
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=42.82 E-value=1.6e+02 Score=25.24 Aligned_cols=139 Identities=14% Similarity=0.090 Sum_probs=73.2
Q ss_pred eEeeeCCCeEEEEeCCCCc--eEEeeeCCceEEEEEecCCcEEEeecCCCeEEEEeccc-------cchhhhh-cc-CcC
Q psy18231 391 ILTASLDCRIRRYDIRTGN--LVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKAT-------GELLEEY-KG-HKS 459 (540)
Q Consensus 391 l~~~~~dg~i~iwd~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~-~~-~~~ 459 (540)
+++.+.+|.|+--....-. .+..-.+..+..+........|+..+..|.++-+.... |..+..+ .- ...
T Consensus 5 ~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~e 84 (256)
T 1zvt_A 5 TIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGA 84 (256)
T ss_dssp EEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTC
T ss_pred EEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCCC
Confidence 4566777777765543211 11111234555555555555666777788876654322 2222211 11 122
Q ss_pred CcceEEEEecCCCCeEEEeeCCCcEEEEEecCC-------cceeEEEecccceeeeEEEEc-CCCcEEEeec-CCeeEEE
Q psy18231 460 GDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS-------SQISTLIHSVGKAVVNSLCSH-PTRKHIMSAC-GNNVKLW 530 (540)
Q Consensus 460 ~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~l~~s-~d~~~l~s~~-d~~i~iw 530 (540)
.|..+ ....++.+|+.++..|.++...+..- .....++ . .+.+-.+... .++..|+..+ +|.+..+
T Consensus 85 ~Iv~~--~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~--~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf 159 (256)
T 1zvt_A 85 TVDHM--LMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLP--E-NAHVMPPVVIEDASDMLLAITQAGRMLMF 159 (256)
T ss_dssp CEEEE--ECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCC--T-TCCBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred EEEEE--EEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEEC--C-CCEEEEEEEecCCCCEEEEEcCCCeEEEE
Confidence 33333 23245677889999999999987542 2222232 2 2344444444 2334455555 8888888
Q ss_pred Eccc
Q psy18231 531 TAEE 534 (540)
Q Consensus 531 ~~~~ 534 (540)
++++
T Consensus 160 ~~~e 163 (256)
T 1zvt_A 160 PVSD 163 (256)
T ss_dssp EGGG
T ss_pred EHHH
Confidence 7753
No 427
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=42.60 E-value=1.7e+02 Score=25.44 Aligned_cols=111 Identities=7% Similarity=0.031 Sum_probs=62.2
Q ss_pred CeEEEEeCCCCCEEEEeeCCCcEEE---EcCCCCeeEEEeecCCcceeEEEEee--CCCeEEEeeCCCeEEEEEcCCCc-
Q psy18231 166 GLMHTRFPVDGSYCLTCGSDKKIKL---WNPYRNLLLKTYGGHAHEVNDATAAC--DSSQIASGASDKSVILWEVTTGQ- 239 (540)
Q Consensus 166 ~v~~v~~spdg~~lat~~~dg~i~i---wd~~~~~~~~~~~~h~~~v~~l~~sp--~~~~l~s~s~dg~i~iwd~~~~~- 239 (540)
.+..+.-.....+|+.-+.+|.++- |++..+.....+. ....|..+.. + +..+++..+.+|.++-..+..-.
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 3444433333444555555666553 3333221111133 3455655543 4 46789999999999999876532
Q ss_pred -----eeEeccccCCceeEEEECCCCCEEEEecCCCcEEEEEecC
Q psy18231 240 -----PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279 (540)
Q Consensus 240 -----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 279 (540)
....++. .+.+..+....+...++..+..|.+..++...
T Consensus 103 ~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~e 146 (276)
T 3no0_A 103 KAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVRE 146 (276)
T ss_dssp CSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGG
T ss_pred hcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhh
Confidence 1112322 34555555555556777788889888777654
No 428
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=36.88 E-value=24 Score=30.79 Aligned_cols=82 Identities=7% Similarity=0.138 Sum_probs=47.2
Q ss_pred ecCCceEEeccCCCCCHHHHHHH---HHcCCCEEEeeeeecccccccchhhccccccCCCCCCEEEEEecCCh-----hH
Q psy18231 13 LLKNLKHCDSTLWTSKLNFRQLV---RSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNH-----DD 84 (540)
Q Consensus 13 ~~~~~~~~ap~~~~~~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~-----~~ 84 (540)
.++..+.++||.+..+.. .+| .++|++.+++.. .+++... ..+ ..+.|+++|+....+ ..
T Consensus 31 ~id~~~~l~p~~~~~~~~--~~~~~~~~~g~~~i~~~~----~~~~~~~---~~~---~~~~~~~v~~~~~~~~~~d~~~ 98 (273)
T 2qjg_A 31 PMDHGVSNGPIKGLIDIR--KTVNDVAEGGANAVLLHK----GIVRHGH---RGY---GKDVGLIIHLSGGTAISPNPLK 98 (273)
T ss_dssp ECCHHHHHCSCTTSSSHH--HHHHHHHHHTCSEEEECH----HHHHSCC---CSS---SCCCEEEEECEECCTTSSSTTC
T ss_pred EcccccccCCCcchhhHH--HHHHHHHhcCCCEEEeCH----HHHHHHH---Hhh---cCCCCEEEEEcCCCcCCCCccc
Confidence 346677799999999986 455 467998877643 2222110 111 235678888876541 11
Q ss_pred ---HHHHHHHhcCCCCeE--eeccCCC
Q psy18231 85 ---FVRATQYVAPHCNGV--DLNCGCP 106 (540)
Q Consensus 85 ---~~~~~~~~~~~~~~i--d~~~gc~ 106 (540)
...+.+.+..+.+.| .++.+++
T Consensus 99 ~~~~~~v~~a~~~Ga~~v~~~l~~~~~ 125 (273)
T 2qjg_A 99 KVIVTTVEEAIRMGADAVSIHVNVGSD 125 (273)
T ss_dssp CEECSCHHHHHHTTCSEEEEEEEETST
T ss_pred chHHHHHHHHHHcCCCEEEEEEecCCC
Confidence 122223345577888 6666654
No 429
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=31.08 E-value=1.5e+02 Score=21.42 Aligned_cols=59 Identities=12% Similarity=0.026 Sum_probs=29.2
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEcCCCCeeEEEeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC
Q psy18231 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237 (540)
Q Consensus 168 ~~v~~spdg~~lat~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 237 (540)
..+.+..||++++.....+ -.+|...+.. ...-..+.+..+|++++... ++.+ +|...+
T Consensus 26 ~~L~~q~dGNLvL~~~~~~-~~vWssnt~~--------~~~~~~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 26 YSLVMRDDCNLVLTKGSKT-NIVWESGTSG--------RGQHCFMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp EEEEECTTSCEEEEETTTT-EEEEECCCTT--------SCSSCEEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEEcCCCEEEEEECCCC-EEEEECCccc--------CCcCEEEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 4455556666555422112 2356543321 11224567777888766543 4444 787544
No 430
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=31.07 E-value=1.5e+02 Score=21.42 Aligned_cols=8 Identities=0% Similarity=0.198 Sum_probs=3.7
Q ss_pred CCeeEEEE
Q psy18231 524 GNNVKLWT 531 (540)
Q Consensus 524 d~~i~iw~ 531 (540)
||.+.+++
T Consensus 98 dGnlvly~ 105 (113)
T 3mez_B 98 NGQAVVYG 105 (113)
T ss_dssp TSCEEEEC
T ss_pred CceEEEec
Confidence 44444443
No 431
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=26.92 E-value=3.3e+02 Score=24.07 Aligned_cols=105 Identities=9% Similarity=0.072 Sum_probs=60.4
Q ss_pred CCCCEEEEeeCCCcEEEEcCCCCe-------eEE--EeecCCcceeEEEEeeCCCeEEEeeCCCeEEEEEcCC-------
Q psy18231 174 VDGSYCLTCGSDKKIKLWNPYRNL-------LLK--TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT------- 237 (540)
Q Consensus 174 pdg~~lat~~~dg~i~iwd~~~~~-------~~~--~~~~h~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~------- 237 (540)
|+..++++.+.+|.|+--.+..-+ -+. .++ ..+.+..+........++..+..|.+.-.....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 466678888999999877543221 111 122 234455555555666788888888877666532
Q ss_pred --Ccee---EeccccCCceeEEEECC---CCCEEEEecCCCcEEEEEecCC
Q psy18231 238 --GQPV---RRWREHASKVTCVKFNE---DSSVVISGSQDNTVMMWDVKSR 280 (540)
Q Consensus 238 --~~~~---~~~~~h~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~ 280 (540)
|..+ ..+. ....|..+...+ +..+++..+..|.++...+...
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~ 134 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDF 134 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGG
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHh
Confidence 1111 1122 233454443332 4567888889999988877654
No 432
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=26.07 E-value=1.5e+02 Score=28.42 Aligned_cols=55 Identities=11% Similarity=0.199 Sum_probs=35.5
Q ss_pred EEEeeCCCcEEEEEec-CC-------cceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEE
Q psy18231 475 IFCGSSDGKIYKWQLV-DS-------SQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKL 529 (540)
Q Consensus 475 l~s~s~dg~i~iwd~~-~~-------~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~i 529 (540)
+..|+.+|.|.-.-+. .+ ..+..+.......+|..|.++++..+|..++ ++-++|
T Consensus 424 ~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 424 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 7788999987544332 21 1233443212457899999999999999999 554443
No 433
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.37 E-value=1.6e+02 Score=28.75 Aligned_cols=56 Identities=13% Similarity=0.123 Sum_probs=36.8
Q ss_pred CeEEEeeCCCcEEEEEecCCc----ceeEEEecccceeee-EEEEcCCCcEEEeec-CCeeE
Q psy18231 473 SQIFCGSSDGKIYKWQLVDSS----QISTLIHSVGKAVVN-SLCSHPTRKHIMSAC-GNNVK 528 (540)
Q Consensus 473 ~~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~-~l~~s~d~~~l~s~~-d~~i~ 528 (540)
..+..|+.+|.|.-..+.... .+..+.......+|. .|.+++++.+|..++ ++.++
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~k 475 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTR 475 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccce
Confidence 347789999987665554332 233343223356785 999999999999998 44444
No 434
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=25.36 E-value=42 Score=31.18 Aligned_cols=33 Identities=6% Similarity=-0.155 Sum_probs=26.7
Q ss_pred eecceecCCceEEeccCCCCCHHHHHHHHHcCC
Q psy18231 8 FNRSTLLKNLKHCDSTLWTSKLNFRQLVRSHNV 40 (540)
Q Consensus 8 ~~~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~ 40 (540)
+.+.+.++-+++.|||.++|+..+=-.+.+.|+
T Consensus 35 lt~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGG 67 (400)
T 3ffs_A 35 LTKNVSLKIPLISSAMDTVTEHLMAVGMARLGG 67 (400)
T ss_dssp SSSSCEESSSEEECSCTTTCSSHHHHHHHTTTC
T ss_pred hhcccCCCCCEEeCCCCCcCcHHHHHHHHHCCC
Confidence 345667788999999999999888777777764
No 435
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=24.81 E-value=3.6e+02 Score=23.80 Aligned_cols=141 Identities=11% Similarity=0.095 Sum_probs=79.6
Q ss_pred CeeEeeeCCCeEEEEeCCC-------CceEEeee-CCceEEEEEecCCcEEEeecCCCeEEEEeccccch---------h
Q psy18231 389 HEILTASLDCRIRRYDIRT-------GNLVTDYV-GEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL---------L 451 (540)
Q Consensus 389 ~~l~~~~~dg~i~iwd~~~-------~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~---------~ 451 (540)
..++..+..|.++...+.. |.....+. +..+..+....+...++..+.+|.+..++...-.. .
T Consensus 115 ~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~ 194 (312)
T 1suu_A 115 AYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCG 194 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEEC
T ss_pred CEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEe
Confidence 6788899999999887742 22222333 35666666655566788888999998888754211 1
Q ss_pred hhhccCcCCcceEEEEecCCCCeEEEeeCCCcEEEEEecCCcc-------eeEEEec-ccceee-eEEEEcCCCcEEEee
Q psy18231 452 EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ-------ISTLIHS-VGKAVV-NSLCSHPTRKHIMSA 522 (540)
Q Consensus 452 ~~~~~~~~~v~~~~~~~s~~~~~l~s~s~dg~i~iwd~~~~~~-------~~~~~~~-~~~~~v-~~l~~s~d~~~l~s~ 522 (540)
..+.. ...+..+ ..-.++..+++.+..|..+..++..-.. +..+... .....+ ....+.++..+++..
T Consensus 195 i~L~~-~d~vv~~--~~v~~~~~l~~vt~~G~~kr~~~~e~~~~~R~~kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t 271 (312)
T 1suu_A 195 MKLKE-GDLFVKV--LSVKENPYLLIVSENGYGKRLNMSKISELKRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVS 271 (312)
T ss_dssp CCCCT-TCCEEEE--EECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCEECSCTTCTTTCSEEEEEEECTTCEEEEEE
T ss_pred EEeCC-CCEEEEE--EEECCCCeEEEEECCCceEEEEHHHhcccCCCCCCEEeeEccCCCCCeEEEEEEeCCCCEEEEEe
Confidence 12222 2223322 3334566788889999999988754321 1112211 112233 334555555555555
Q ss_pred cCCeeEEEEc
Q psy18231 523 CGNNVKLWTA 532 (540)
Q Consensus 523 ~d~~i~iw~~ 532 (540)
+.|.+.-..+
T Consensus 272 ~~g~~~r~~~ 281 (312)
T 1suu_A 272 KRSKALRTVA 281 (312)
T ss_dssp TTCEEEEEEG
T ss_pred CCCeEEEEEc
Confidence 5664433343
No 436
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=22.65 E-value=4.1e+02 Score=23.64 Aligned_cols=196 Identities=12% Similarity=0.080 Sum_probs=0.0
Q ss_pred eeccceeEEEeecccceecccccccccccchhhhhhcccccEEEEEecC-CeeEeeeCCCeEEEEeC---------CCCc
Q psy18231 340 LMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD-HEILTASLDCRIRRYDI---------RTGN 409 (540)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~~~dg~i~iwd~---------~~~~ 409 (540)
.......+......|-........+......-..+.....-+..+..+. +.++..+..|.+.-+.. ..|.
T Consensus 1 lI~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~ 80 (323)
T 1wp5_A 1 MVASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQ 80 (323)
T ss_dssp CCSCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred CccCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCc
Q ss_pred eEEee----eCCceEEEEEecC---CcEEEeecCCCeEEEEec--------cccchhhhhccCcCCcceEEEEecCCCCe
Q psy18231 410 LVTDY----VGEPIVDACFTRD---CQCILTCSTDECLRLFDK--------ATGELLEEYKGHKSGDFRIECCLDSKDSQ 474 (540)
Q Consensus 410 ~~~~~----~~~~i~~~~~sp~---~~~l~~~~~dg~i~i~d~--------~~~~~~~~~~~~~~~v~~~~~~~s~~~~~ 474 (540)
++..+ .+..|.++..-++ +.+++..+.+|.++-..+ ..+.....++.. ..+..+ ........
T Consensus 81 ~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~--~~~~~~~~ 157 (323)
T 1wp5_A 81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDV--HLTDGMNE 157 (323)
T ss_dssp EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEE--EEECSCSE
T ss_pred ChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEE--EEeCCCCE
Q ss_pred EEEeeCCCcEEEEEe-------cCCcceeEEEecccceeeeEEEEcCCCc-EEEeec-CCeeEEEEcccccCCC
Q psy18231 475 IFCGSSDGKIYKWQL-------VDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMSAC-GNNVKLWTAEEDYGQG 539 (540)
Q Consensus 475 l~s~s~dg~i~iwd~-------~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~s~~-d~~i~iw~~~~~~~~~ 539 (540)
|+..+.+|.+..+.. +..+-+.-+.. .....|.++...+++. .|++.+ .|..+.-+++.-...+
T Consensus 158 i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L-~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~ 230 (323)
T 1wp5_A 158 LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNL-KEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKAT 230 (323)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCC-CTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCC
T ss_pred EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEe-CCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccC
No 437
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=22.26 E-value=68 Score=30.86 Aligned_cols=35 Identities=9% Similarity=-0.039 Sum_probs=30.5
Q ss_pred ceeecceecCCceEEeccCCCCCHHHHHHHHHcCC
Q psy18231 6 CRFNRSTLLKNLKHCDSTLWTSKLNFRQLVRSHNV 40 (540)
Q Consensus 6 ~~~~~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~ 40 (540)
-++.+.+.++-|++.|||..+|...+..+..+.|.
T Consensus 33 t~lt~~i~l~iPivsa~M~tVTe~~lA~ala~~GG 67 (490)
T 4avf_A 33 TRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGG 67 (490)
T ss_dssp EEEETTEEESSSEEECSCTTTCSHHHHHHHHHHTS
T ss_pred cccccCcccCCCccccchhhhCHHHHHHHHHHcCC
Confidence 35667888999999999999999999999988864
No 438
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=21.24 E-value=64 Score=29.43 Aligned_cols=30 Identities=3% Similarity=-0.067 Sum_probs=24.7
Q ss_pred ceecCCceEEeccCCCCCHHHHHHHHHcCC
Q psy18231 11 STLLKNLKHCDSTLWTSKLNFRQLVRSHNV 40 (540)
Q Consensus 11 ~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~ 40 (540)
...++.+++.|||.+.++..+=..+.+.|+
T Consensus 53 ~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gg 82 (351)
T 2c6q_A 53 QTYSGVPIIAANMDTVGTFEMAKVLCKFSL 82 (351)
T ss_dssp CEEEECCEEECSSTTTSCHHHHHHHHHTTC
T ss_pred CccccCCEEECCCCCCCcHHHHHHHHHCCC
Confidence 566788999999999999887777777774
No 439
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.87 E-value=4e+02 Score=26.73 Aligned_cols=60 Identities=7% Similarity=0.168 Sum_probs=37.6
Q ss_pred CCCCe--EEEeeCCCcEE-EEEecCCc-------ceeEEEecccceeeeEEEEcCCCcEEEeec-CCeeEE
Q psy18231 470 SKDSQ--IFCGSSDGKIY-KWQLVDSS-------QISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKL 529 (540)
Q Consensus 470 ~~~~~--l~s~s~dg~i~-iwd~~~~~-------~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-d~~i~i 529 (540)
.+|++ +..|+.+|.|. +....... .+..+..-....+|..|.++++.+.|..++ ++.++|
T Consensus 425 ~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 425 EDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 45543 77889999874 33322211 233333224567899999999999999999 655543
No 440
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=20.35 E-value=81 Score=30.41 Aligned_cols=35 Identities=9% Similarity=-0.019 Sum_probs=30.0
Q ss_pred ceeecceecCCceEEeccCCCCCHHHHHHHHHcCC
Q psy18231 6 CRFNRSTLLKNLKHCDSTLWTSKLNFRQLVRSHNV 40 (540)
Q Consensus 6 ~~~~~~~~~~~~~~~ap~~~~~~~~~r~~~~~~~~ 40 (540)
-++.+.+.++-+++.|||..+|..-...+..+.|.
T Consensus 34 t~lt~~i~l~iPivsa~MdtVTe~~ma~a~a~~GG 68 (496)
T 4fxs_A 34 TRLTKNIALNIPMVSASMDTVTEARLAIALAQEGG 68 (496)
T ss_dssp EEEETTEEESSSEEECCCTTTCSHHHHHHHHHHTC
T ss_pred ceeccccccCCCceecCcchhhHHHHHHHHHHcCC
Confidence 35667888999999999999999999888888764
No 441
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.11 E-value=6e+02 Score=25.51 Aligned_cols=67 Identities=9% Similarity=0.175 Sum_probs=41.0
Q ss_pred ceeEEEEee----CCC--eEEEeeCCCeEE-EEEcCCCc-------eeEec--cccCCceeEEEECCCCCEEEEecCCCc
Q psy18231 208 EVNDATAAC----DSS--QIASGASDKSVI-LWEVTTGQ-------PVRRW--REHASKVTCVKFNEDSSVVISGSQDNT 271 (540)
Q Consensus 208 ~v~~l~~sp----~~~--~l~s~s~dg~i~-iwd~~~~~-------~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~dg~ 271 (540)
..+.|+... +++ .++.|+.+|.|. +.....+. .+..+ .....+|..|.++++..+|+.++.++.
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V 492 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 492 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEE
Confidence 345555532 343 477888999874 43322221 11111 135678999999999999999998775
Q ss_pred EEE
Q psy18231 272 VMM 274 (540)
Q Consensus 272 i~i 274 (540)
+++
T Consensus 493 ~kV 495 (667)
T 4gz8_A 493 AQL 495 (667)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
Done!