Your job contains 1 sequence.
>psy18231
MCRNNCRFNRSTLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKAR
NNEFSTSPEDTPLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALL
SKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCL
TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP
VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDS
ITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGD
VTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIV
DACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS
DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQGD
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18231
(540 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 436 2.8e-80 2
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 430 5.8e-80 2
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 431 7.4e-80 2
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 420 2.5e-79 2
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 417 5.2e-79 2
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 419 4.6e-76 2
FB|FBgn0028897 - symbol:CG4935 species:7227 "Drosophila m... 442 4.7e-74 2
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 433 9.6e-41 1
WB|WBGene00018014 - symbol:F33G12.2 species:6239 "Caenorh... 355 3.1e-32 1
UNIPROTKB|Q19986 - symbol:F33G12.2 "Protein F33G12.2" spe... 355 3.1e-32 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 312 2.2e-27 1
UNIPROTKB|A6QPA8 - symbol:DUS4L "DUS4L protein" species:9... 311 2.9e-27 1
UNIPROTKB|O95620 - symbol:DUS4L "tRNA-dihydrouridine(20a/... 307 8.0e-27 1
UNIPROTKB|I3LP14 - symbol:DUS4L "Uncharacterized protein"... 305 1.3e-26 1
FB|FBgn0032750 - symbol:CG10495 species:7227 "Drosophila ... 303 2.2e-26 1
UNIPROTKB|E2RRJ8 - symbol:DUS4L "Uncharacterized protein"... 303 2.2e-26 1
ZFIN|ZDB-GENE-040801-233 - symbol:dus4l "dihydrouridine s... 301 3.7e-26 1
MGI|MGI:1919166 - symbol:Dus4l "dihydrouridine synthase 4... 300 4.8e-26 1
UNIPROTKB|F1NHN2 - symbol:DUS4L "tRNA-dihydrouridine synt... 293 2.8e-25 1
RGD|1311445 - symbol:Dus4l "dihydrouridine synthase 4-lik... 293 2.8e-25 1
UNIPROTKB|D4A0T1 - symbol:Dus4l "Protein Dus4l" species:1... 293 2.8e-25 1
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 291 4.7e-25 1
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 282 4.5e-24 1
DICTYBASE|DDB_G0291360 - symbol:dus4l "tRNA-dihydrouridin... 262 7.9e-24 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 303 2.1e-23 1
SGD|S000004397 - symbol:DUS4 "Dihydrouridine synthase" sp... 268 4.7e-22 1
UNIPROTKB|F8WEL2 - symbol:DUS4L "tRNA-dihydrouridine(20a/... 256 3.2e-21 1
POMBASE|SPCC777.15 - symbol:SPCC777.15 "tRNA dihydrouridi... 254 5.2e-21 1
WB|WBGene00016674 - symbol:C45G9.2 species:6239 "Caenorha... 247 3.0e-20 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 171 5.1e-19 2
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 185 1.5e-18 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 171 2.6e-18 2
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 180 1.4e-17 2
UNIPROTKB|I3LI24 - symbol:GNB2L1 "Guanine nucleotide-bind... 173 2.5e-17 2
CGD|CAL0003746 - symbol:orf19.966 species:5476 "Candida a... 230 5.8e-17 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 235 5.9e-17 1
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 166 1.1e-16 2
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 166 1.1e-16 2
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 166 1.1e-16 2
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 166 1.1e-16 2
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 166 1.1e-16 2
UNIPROTKB|B1N1C2 - symbol:GNB2L1 "Uncharacterized protein... 166 1.1e-16 2
UNIPROTKB|Q4R7Y4 - symbol:GNB2L1 "Guanine nucleotide-bind... 166 1.1e-16 2
UNIPROTKB|Q5U275 - symbol:gnb2l1 "LOC495666 protein" spec... 166 1.1e-16 2
MGI|MGI:101849 - symbol:Gnb2l1 "guanine nucleotide bindin... 166 1.1e-16 2
RGD|69229 - symbol:Gnb2l1 "guanine nucleotide binding pro... 166 1.1e-16 2
UNIPROTKB|G8JL27 - symbol:GNB2L1 "Guanine nucleotide-bind... 166 1.1e-16 2
UNIPROTKB|O42249 - symbol:gnb2l1 "Guanine nucleotide-bind... 167 1.3e-16 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 168 2.7e-16 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 240 2.7e-16 1
FB|FBgn0020618 - symbol:Rack1 "Receptor of activated prot... 159 4.7e-16 2
ZFIN|ZDB-GENE-990415-89 - symbol:gnb2l1 "guanine nucleoti... 163 5.1e-16 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 217 7.1e-16 1
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 166 1.4e-15 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 219 2.1e-15 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 217 2.1e-15 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 217 2.1e-15 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 217 2.1e-15 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 217 2.1e-15 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 217 2.1e-15 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 217 2.1e-15 1
TAIR|locus:2155528 - symbol:AT5G67220 species:3702 "Arabi... 219 4.2e-15 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 162 4.2e-15 2
DICTYBASE|DDB_G0278803 - symbol:dus1l "tRNA-dihydrouridin... 213 6.3e-15 2
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 168 9.9e-15 2
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 175 1.2e-14 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 170 1.2e-14 2
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 180 1.2e-14 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 175 1.5e-14 2
UNIPROTKB|D6RFX4 - symbol:GNB2L1 "Guanine nucleotide-bind... 158 2.2e-14 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 175 2.6e-14 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 178 3.0e-14 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 211 3.2e-14 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 167 3.3e-14 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 175 6.6e-14 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 175 6.6e-14 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 175 6.6e-14 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 175 6.6e-14 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 175 6.6e-14 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 175 6.6e-14 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 175 6.6e-14 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 175 6.6e-14 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 175 6.6e-14 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 203 1.1e-13 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 160 1.2e-13 2
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 182 1.8e-13 2
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 155 1.8e-13 2
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 145 2.2e-13 2
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 145 2.2e-13 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 171 2.4e-13 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 173 2.9e-13 2
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 186 3.0e-13 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 202 3.1e-13 1
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 152 3.2e-13 2
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 152 3.2e-13 2
UNIPROTKB|J3QKP9 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 182 3.4e-13 1
UNIPROTKB|I3LSG8 - symbol:I3LSG8 "Uncharacterized protein... 170 3.9e-13 2
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 155 4.0e-13 2
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 178 4.3e-13 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 176 4.7e-13 2
WARNING: Descriptions of 852 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 436 (158.5 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 85/169 (50%), Positives = 110/169 (65%)
Query: 372 QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCI 431
Q L EARD ++SV VSDHEIL S+D R+RRYD+R G L +DYVG PI CF+RD QC
Sbjct: 147 QTLDEARDGVSSVKVSDHEILAGSVDGRVRRYDLRMGQLFSDYVGSPITCTCFSRDGQCT 206
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
L S D LRL DK TGELL EYKGHK+ +++++CCL +D+ + S DGK++ W LV+
Sbjct: 207 LVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVE 266
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQGD 540
+ L VG VV SL HPT +++A G +V+ W EE Y D
Sbjct: 267 GALALAL--PVGSGVVQSLAYHPTEPCLLTAMGGSVQCWR-EEAYEAED 312
Score = 389 (142.0 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 71/134 (52%), Positives = 97/134 (72%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
RF VDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA + D+S + SG DK+V
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAV 91
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+LW+V +GQ VR++R HA KV V+FNE+++V++SGS D+++ WD +SR P+Q
Sbjct: 92 VLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQT--- 148
Query: 291 NEALKEARDSITSV 304
L EARD ++SV
Sbjct: 149 ---LDEARDGVSSV 159
Score = 49 (22.3 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWD 276
V V+FN D + ++ D T+ +W+
Sbjct: 28 VRAVRFNVDGNYCLTCGSDKTLKLWN 53
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 430 (156.4 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 83/165 (50%), Positives = 109/165 (66%)
Query: 372 QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCI 431
Q L EARD I+SV VSDHE+L S+D R+RRYD+R G L +DYVG PI CF+RD QC
Sbjct: 147 QTLDEARDGISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVGSPITCTCFSRDGQCT 206
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
L S D LRL DK TGELL EY GHK+ +++++CCL +D+ + S DGK++ W LV+
Sbjct: 207 LVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVE 266
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 536
+ L VG +VV SL HPT +++A G +V+ W EE Y
Sbjct: 267 GVLVLAL--PVGPSVVQSLAYHPTEPCLLTAMGGSVQCWR-EEAY 308
Score = 392 (143.0 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 73/134 (54%), Positives = 97/134 (72%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
RF VDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA + D+S + SG DK+V
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAV 91
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+LW+V +GQ VR++R HA KV V+FNE+++V++SGS D++V WD +SR P+Q
Sbjct: 92 VLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQT--- 148
Query: 291 NEALKEARDSITSV 304
L EARD I+SV
Sbjct: 149 ---LDEARDGISSV 159
Score = 49 (22.3 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWD 276
V V+FN D + ++ D T+ +W+
Sbjct: 28 VRAVRFNVDGNYCLTCGSDKTLKLWN 53
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 431 (156.8 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 84/165 (50%), Positives = 108/165 (65%)
Query: 372 QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCI 431
Q L EARD I+SV VSDHE+L+ S+D R+RRYD+R G L +DYVG PI CF+RD QC
Sbjct: 147 QTLDEARDGISSVKVSDHEVLSGSVDGRVRRYDLRMGQLFSDYVGSPITCTCFSRDGQCT 206
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
L S D LRL DK TGELL EY GHK+ +++++CCL +D+ + S DGK+Y W LV+
Sbjct: 207 LVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCSEDGKVYFWDLVE 266
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 536
+ L VG VV SL HPT +++A G +V W EE Y
Sbjct: 267 GALALAL--PVGPGVVQSLAYHPTEPCLLTAMGGSVHCWR-EEAY 308
Score = 390 (142.3 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 72/134 (53%), Positives = 97/134 (72%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
RF VDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA + D+S + SG DK+V
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAV 91
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+LW+V +GQ VR++R HA KV V+FNE+++V++SGS D+++ WD +SR P+Q
Sbjct: 92 VLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQT--- 148
Query: 291 NEALKEARDSITSV 304
L EARD I+SV
Sbjct: 149 ---LDEARDGISSV 159
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 30/106 (28%), Positives = 55/106 (51%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
D S + G DK + LW+ +++ + GHA +VN +++ I SG+ D S+ W+
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWD 137
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ +PV+ E ++ VK ++ V+SGS D V +D++
Sbjct: 138 CRSRRPEPVQTLDEARDGISSVKVSDHE--VLSGSVDGRVRRYDLR 181
Score = 49 (22.3 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWD 276
V V+FN D + ++ D T+ +W+
Sbjct: 28 VRAVRFNVDGNYCLTCGSDKTLKLWN 53
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 420 (152.9 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 82/165 (49%), Positives = 107/165 (64%)
Query: 372 QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCI 431
Q L EARD I+SV VSDHEIL S+D R+RRYD+R G + +DYVG PI CF+RD QC
Sbjct: 147 QTLDEARDGISSVKVSDHEILAGSVDGRVRRYDLRMGQVSSDYVGSPITCTCFSRDGQCT 206
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
L S D LRL DK TGELL EY GHK+ ++++CCL +D+ + S DGK++ W LV+
Sbjct: 207 LISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTHVVSCSEDGKVFFWDLVE 266
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 536
+ L VG VV SL HPT +++A G +++ W EE Y
Sbjct: 267 GALALAL--PVGSNVVQSLAYHPTEPCLLTAMGGSIQYWR-EETY 308
Score = 396 (144.5 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 74/134 (55%), Positives = 97/134 (72%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
RF VDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA + D+S + SG DK+V
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTV 91
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+LW+V TGQ VR++R HA KV V+FNE+++V++SGS D++V WD +SR P+Q
Sbjct: 92 VLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQT--- 148
Query: 291 NEALKEARDSITSV 304
L EARD I+SV
Sbjct: 149 ---LDEARDGISSV 159
Score = 49 (22.3 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWD 276
V V+FN D + ++ D T+ +W+
Sbjct: 28 VRAVRFNVDGNYCLTCGSDKTLKLWN 53
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 417 (151.9 bits), Expect = 5.2e-79, Sum P(2) = 5.2e-79
Identities = 82/165 (49%), Positives = 106/165 (64%)
Query: 372 QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCI 431
Q L EARD I+SV VSDHEIL S+D R+RRYD+R G + +DYVG PI CF+RD QC
Sbjct: 147 QTLDEARDGISSVKVSDHEILAGSVDGRVRRYDLRMGQVTSDYVGSPITCTCFSRDGQCT 206
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
L S D LRL DK TGELL EY GHK+ ++++CCL +D+ + S DGK++ W LV+
Sbjct: 207 LISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHVVSCSEDGKVFFWDLVE 266
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 536
S L VG VV SL HP +++A G +++ W EE Y
Sbjct: 267 GSLALAL--PVGSNVVQSLAYHPADPCLLTAMGGSIQYWR-EETY 308
Score = 396 (144.5 bits), Expect = 5.2e-79, Sum P(2) = 5.2e-79
Identities = 74/134 (55%), Positives = 97/134 (72%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
RF VDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA + D+S + SG DK+V
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTV 91
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+LW+V TGQ VR++R HA KV V+FNE+++V++SGS D++V WD +SR P+Q
Sbjct: 92 VLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQT--- 148
Query: 291 NEALKEARDSITSV 304
L EARD I+SV
Sbjct: 149 ---LDEARDGISSV 159
Score = 49 (22.3 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWD 276
V V+FN D + ++ D T+ +W+
Sbjct: 28 VRAVRFNVDGNYCLTCGSDKTLKLWN 53
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 419 (152.6 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
Identities = 80/170 (47%), Positives = 112/170 (65%)
Query: 372 QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCI 431
Q L E++D I+S+ VS+HE+LT S+D R+RRYD+R G L DY+G PI CF+RD QC
Sbjct: 147 QILDESQDGISSLKVSEHELLTGSVDGRVRRYDLRMGQLQVDYIGSPITCVCFSRDGQCT 206
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
L+ S D +RL DK+TGE+L EY GH + ++++CCL KD+ + S DG +Y W LV+
Sbjct: 207 LSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVE 266
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE-EDYGQGD 540
S TL VGKAVV SL HPT ++++ V++W AE ED + +
Sbjct: 267 GSL--TLKLPVGKAVVQSLSFHPTEPRLLTSMEGRVQVWGAEPEDAAENE 314
Score = 366 (133.9 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
Identities = 71/134 (52%), Positives = 95/134 (70%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
RF DG+Y LTCGSDK +KLW+ R LLKTY GH +EV DA + D+SQ+ S +SDK+V
Sbjct: 32 RFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSSDKTV 91
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
ILW+V +GQ R+ R HA KV CV+FNE+++V++SGS D TV WD +SR PIQ+
Sbjct: 92 ILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQI--- 148
Query: 291 NEALKEARDSITSV 304
L E++D I+S+
Sbjct: 149 ---LDESQDGISSL 159
Score = 54 (24.1 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 240 PVRRWRE---HASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
P WR V V+FN D + +++ D ++ +W V
Sbjct: 14 PQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSV 54
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 442 (160.7 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 84/134 (62%), Positives = 100/134 (74%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
R+ VDG+YCL+CGSDKKIKLWNP LLLKTYGGHA EV DA +CDSS I S + DKS+
Sbjct: 24 RYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVSASLDKSI 83
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
I W+V+TG PVRR R HA V CV FNEDSS+ ISG +DN VM WD+++R P+QV
Sbjct: 84 IYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDPVQV--- 140
Query: 291 NEALKEARDSITSV 304
+KEARD IT+V
Sbjct: 141 ---MKEARDCITTV 151
Score = 324 (119.1 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 67/151 (44%), Positives = 92/151 (60%)
Query: 372 QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCI 431
Q +KEARD IT+V +++ I ASLD +R YDIR G L D +GEPI TRD QC+
Sbjct: 139 QVMKEARDCITTVATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITYLAQTRDEQCL 198
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
+ D +RL D TG LL EY+GH+ D+ IEC + S D+QI GSSDG + + L+D
Sbjct: 199 VAGCQDSVVRLLDCETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDLLD 258
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522
+ + S VV+SL +HP R+ ++ A
Sbjct: 259 GKVLQRIRISDNGGVVHSLATHPKRQEMLFA 289
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 108/293 (36%), Positives = 160/293 (54%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWD------VKSRSHHPIQVRCLNEALKEARDSITSV 304
V V+FN D + ++ D T+ +W+ +++ S H +V L+ A S+ S
Sbjct: 28 VRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEV--LDAAGSFDNSSLCSG 85
Query: 305 HSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST-QIGDVTP 363
+++G ++V FR G ++ V + + ++L + ST + D
Sbjct: 86 GGDKAVVLWDVASG---QVVRKFRGHA--GKVNTVQFNEEATVILSGSIDSTIRCWDCR- 139
Query: 364 ISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDAC 423
S Q L EARD I+SV VSDHE+L S+D R+RRYD+R G L +DYVG PI C
Sbjct: 140 -SRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVGSPITCIC 198
Query: 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGK 483
F+RD QC L S D LRL DK TGELL EY GHK+ +++++CCL +D+ + S DGK
Sbjct: 199 FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHVVSCSEDGK 258
Query: 484 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 536
++ W LV+ + L VG VV SL HPT +++A G +++ W EE Y
Sbjct: 259 VFFWDLVEGALALAL--PVGPGVVQSLTYHPTEPCLLTAMGGSIQCWR-EETY 308
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 73/134 (54%), Positives = 97/134 (72%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
RF VDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA + D+S + SG DK+V
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAV 91
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+LW+V +GQ VR++R HA KV V+FNE+++V++SGS D+T+ WD +SR P+Q
Sbjct: 92 VLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKPEPVQT--- 148
Query: 291 NEALKEARDSITSV 304
L EARD I+SV
Sbjct: 149 ---LDEARDGISSV 159
>WB|WBGene00018014 [details] [associations]
symbol:F33G12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0019915 HSSP:P16649
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 KO:K13124
OMA:CKQGAVR EMBL:FO080686 RefSeq:NP_494926.1
ProteinModelPortal:Q19986 SMR:Q19986 IntAct:Q19986 STRING:Q19986
EnsemblMetazoa:F33G12.2 GeneID:173867 KEGG:cel:CELE_F33G12.2
UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2 InParanoid:Q19986
NextBio:881457 Uniprot:Q19986
Length = 305
Score = 355 (130.0 bits), Expect = 3.1e-32, P = 3.1e-32
Identities = 67/134 (50%), Positives = 95/134 (70%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
R+ VDG+YC+TCGSDK +KLWNP ++ LLKTY G +EV DA ++ D+SQIA+G +D++
Sbjct: 23 RYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGADRAC 82
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+++V TG+ +RRWR H ++V V FNE+SSVV SGS D T+ +D +SRS PIQ+
Sbjct: 83 TVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRSEKPIQI--- 139
Query: 291 NEALKEARDSITSV 304
E+ D I S+
Sbjct: 140 ---FNESTDGILSI 150
Score = 327 (120.2 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 84/286 (29%), Positives = 137/286 (47%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310
V V++N D + ++ D TV +W+ S NE L A S S + +
Sbjct: 19 VRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGA 78
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST-QIGDVTPISIHNS 369
+ + T R + ++ V + + +V + T Q D S
Sbjct: 79 DRACTVFDVETGKQLR-RWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRS--EK 135
Query: 370 CFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQ 429
Q E+ D I S+ V+ HEI+ S D R Y IR GN+ DY+G+ + FT D
Sbjct: 136 PIQIFNESTDGILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDYMGDSVNSVSFTPDSN 195
Query: 430 CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
C+L +RL DK++G+LL YKGH++ +++++C + + GS DG +Y + L
Sbjct: 196 CLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYKLDCRVLQSIEHVASGSEDGFVYVYSL 255
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED 535
+DS +S L H V++SL +HP ++ +M+A G + LW AE+D
Sbjct: 256 LDSHIVSKLEHP--SKVIHSLTAHPKKERLMTAAGQMIYLWVAEDD 299
>UNIPROTKB|Q19986 [details] [associations]
symbol:F33G12.2 "Protein F33G12.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0019915 HSSP:P16649 GeneTree:ENSGT00700000104496
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR EMBL:FO080686
RefSeq:NP_494926.1 ProteinModelPortal:Q19986 SMR:Q19986
IntAct:Q19986 STRING:Q19986 EnsemblMetazoa:F33G12.2 GeneID:173867
KEGG:cel:CELE_F33G12.2 UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2
InParanoid:Q19986 NextBio:881457 Uniprot:Q19986
Length = 305
Score = 355 (130.0 bits), Expect = 3.1e-32, P = 3.1e-32
Identities = 67/134 (50%), Positives = 95/134 (70%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
R+ VDG+YC+TCGSDK +KLWNP ++ LLKTY G +EV DA ++ D+SQIA+G +D++
Sbjct: 23 RYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGADRAC 82
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+++V TG+ +RRWR H ++V V FNE+SSVV SGS D T+ +D +SRS PIQ+
Sbjct: 83 TVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRSEKPIQI--- 139
Query: 291 NEALKEARDSITSV 304
E+ D I S+
Sbjct: 140 ---FNESTDGILSI 150
Score = 327 (120.2 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 84/286 (29%), Positives = 137/286 (47%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310
V V++N D + ++ D TV +W+ S NE L A S S + +
Sbjct: 19 VRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGA 78
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST-QIGDVTPISIHNS 369
+ + T R + ++ V + + +V + T Q D S
Sbjct: 79 DRACTVFDVETGKQLR-RWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRS--EK 135
Query: 370 CFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQ 429
Q E+ D I S+ V+ HEI+ S D R Y IR GN+ DY+G+ + FT D
Sbjct: 136 PIQIFNESTDGILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDYMGDSVNSVSFTPDSN 195
Query: 430 CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
C+L +RL DK++G+LL YKGH++ +++++C + + GS DG +Y + L
Sbjct: 196 CLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYKLDCRVLQSIEHVASGSEDGFVYVYSL 255
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED 535
+DS +S L H V++SL +HP ++ +M+A G + LW AE+D
Sbjct: 256 LDSHIVSKLEHP--SKVIHSLTAHPKKERLMTAAGQMIYLWVAEDD 299
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 312 (114.9 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 85/303 (28%), Positives = 148/303 (48%)
Query: 159 RELFVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 214
+E +L G ++ RF DG+Y LTCG D+ I+LWNP+R +L+KTY H EV D
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHV 68
Query: 215 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 274
D+++ S D+ V W+V+TG+ +R++R H +V VKFN+ SSVV+S D ++ +
Sbjct: 69 TSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRV 128
Query: 275 WDVKSRSHHPIQV------RCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFR 328
WD +S S P+Q+ ++ L + SV V++ + + L
Sbjct: 129 WDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQPVN 188
Query: 329 CKYL----NGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSV 384
C + N +L+G L ST + LLD G++ + ++ + +T+
Sbjct: 189 CISISNDGNCVLAGCLDST---LRLLD----RTTGEL--LQVYKGHISKSFKTDCCLTN- 238
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIV--DACFTRDCQCILTCSTDECLRL 442
SD ++ S D + +D+ +++ + +V + C+LT S D +R+
Sbjct: 239 --SDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRV 296
Query: 443 FDK 445
+ K
Sbjct: 297 WKK 299
Score = 302 (111.4 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 82/295 (27%), Positives = 146/295 (49%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARD-SITSVH 305
H V +FN D + ++ +D T+ +W+ H I ++ +E RD +TS +
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWN----PHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 306 SLVKSTKNH-------LSNGLLTKLVFAFRCKYLNGLLSGVLMS-TQHLMVLLDFLGSTQ 357
+ S +S G +++ FR +G ++ V + + ++V F S +
Sbjct: 73 AKFCSCGGDRQVYYWDVSTG---RVIRKFRGH--DGEVNAVKFNDSSSVVVSAGFDRSLR 127
Query: 358 IGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE 417
+ D S+ Q + D++ SV ++ EI+ S+D +R +D+R G ++D +G+
Sbjct: 128 VWDCRSHSVEP--VQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQ 185
Query: 418 PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC 477
P+ + D C+L D LRL D+ TGELL+ YKGH S F+ +CCL + D+ +
Sbjct: 186 PVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIG 245
Query: 478 GSSDGKIYKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIM-SACGNNVKLW 530
GS DG ++ W LVD+ +S H + VV S+ HP ++ S+ +++W
Sbjct: 246 GSEDGLVFFWDLVDAKVLSKFRAHDL---VVTSVSYHPKEDCMLTSSVDGTIRVW 297
>UNIPROTKB|A6QPA8 [details] [associations]
symbol:DUS4L "DUS4L protein" species:9913 "Bos taurus"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:11062 HOVERGEN:HBG053313 KO:K05545
OrthoDB:EOG4ZCT4T GeneTree:ENSGT00550000074907 EMBL:DAAA02010587
EMBL:BC149229 IPI:IPI00866854 RefSeq:NP_001095407.1
UniGene:Bt.13512 STRING:A6QPA8 Ensembl:ENSBTAT00000029128
GeneID:511017 KEGG:bta:511017 InParanoid:A6QPA8 OMA:YLENEHK
NextBio:20869728 Uniprot:A6QPA8
Length = 238
Score = 311 (114.5 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 55/106 (51%), Positives = 79/106 (74%)
Query: 17 LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
+K C + SKL+FR LVR ++ DLC+TPMI+A F++S+KAR++EF+T+ D PL+VQ
Sbjct: 28 VKICAPMVRYSKLSFRTLVRKYDCDLCYTPMIVAADFVRSAKARDSEFTTNQGDCPLIVQ 87
Query: 77 FASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
FA+N+ A + V P+ NG+D+NCGCPQRWA+ EGYG L++K
Sbjct: 88 FAANDARLLSDAARIVCPYANGIDINCGCPQRWALAEGYGACLINK 133
>UNIPROTKB|O95620 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CH471070 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 EMBL:U62767 EMBL:AK297195
EMBL:BC111774 IPI:IPI00021410 IPI:IPI00783809 RefSeq:NP_001257348.1
RefSeq:NP_853559.1 UniGene:Hs.97627 ProteinModelPortal:O95620
SMR:O95620 STRING:O95620 PaxDb:O95620 PRIDE:O95620
Ensembl:ENST00000265720 Ensembl:ENST00000402620 GeneID:11062
KEGG:hsa:11062 UCSC:uc003veh.3 CTD:11062 GeneCards:GC07P107203
HGNC:HGNC:21517 HPA:HPA044301 neXtProt:NX_O95620
PharmGKB:PA142671939 HOVERGEN:HBG053313 InParanoid:O95620 KO:K05545
OMA:AGPMVRY OrthoDB:EOG4ZCT4T PhylomeDB:O95620 GenomeRNAi:11062
NextBio:42037 ArrayExpress:O95620 Bgee:O95620 CleanEx:HS_DUS4L
Genevestigator:O95620 GermOnline:ENSG00000105865 Uniprot:O95620
Length = 317
Score = 307 (113.1 bits), Expect = 8.0e-27, P = 8.0e-27
Identities = 56/106 (52%), Positives = 77/106 (72%)
Query: 17 LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
+K C + SKL FR LVR ++ DLC+TPMI+A F+KS KAR++EF+T+ D PL+VQ
Sbjct: 28 VKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTTNQGDCPLIVQ 87
Query: 77 FASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
FA+N+ A + V P+ NG+D+NCGCPQRWA+ EGYG L++K
Sbjct: 88 FAANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINK 133
>UNIPROTKB|I3LP14 [details] [associations]
symbol:DUS4L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000074907 OMA:YLENEHK EMBL:FP565643
Ensembl:ENSSSCT00000023658 Uniprot:I3LP14
Length = 237
Score = 305 (112.4 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 55/106 (51%), Positives = 77/106 (72%)
Query: 17 LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
+K C + SKL FR LVR ++ DLC+TPMI+A F++S KAR++EF+T+ D PL+VQ
Sbjct: 30 VKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSVKARDSEFTTNQGDCPLIVQ 89
Query: 77 FASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
FA+N+ A + V P+ NG+D+NCGCPQRWA+ EGYG L++K
Sbjct: 90 FAANDARLLSDAARIVCPYANGIDINCGCPQRWALAEGYGACLINK 135
>FB|FBgn0032750 [details] [associations]
symbol:CG10495 species:7227 "Drosophila melanogaster"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:AE014134 Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:AY069347 RefSeq:NP_609939.1
UniGene:Dm.465 SMR:Q9VJ06 STRING:Q9VJ06 EnsemblMetazoa:FBtr0081150
GeneID:35179 KEGG:dme:Dmel_CG10495 UCSC:CG10495-RA
FlyBase:FBgn0032750 InParanoid:Q9VJ06 OrthoDB:EOG4X3FH5
GenomeRNAi:35179 NextBio:792243 Uniprot:Q9VJ06
Length = 396
Score = 303 (111.7 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 55/111 (49%), Positives = 78/111 (70%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFV 86
SKL FR+LVR + V L FTPM+I+DS S KAR NEFST +D PL+ QFA+ + +FV
Sbjct: 34 SKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAAKDPTEFV 93
Query: 87 RATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK-QRTHPLLFSLPRTI 136
+ Q + P+ +G+DLNCGCPQ WA+ +GYGC +L + + H ++ + RT+
Sbjct: 94 TSAQLIYPYVDGIDLNCGCPQSWAMAKGYGCGMLRQPELVHQVVQEVRRTL 144
>UNIPROTKB|E2RRJ8 [details] [associations]
symbol:DUS4L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:11062 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:AAEX03011212 RefSeq:XP_540383.2
Ensembl:ENSCAFT00000006298 GeneID:483264 KEGG:cfa:483264
Uniprot:E2RRJ8
Length = 317
Score = 303 (111.7 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 55/106 (51%), Positives = 76/106 (71%)
Query: 17 LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
+K C + SKL FR LVR + DLC+TPMI+A F++S KAR++EF+T+ D PL+VQ
Sbjct: 28 VKVCAPMVRYSKLAFRTLVRKYGCDLCYTPMIVAADFVRSIKARDSEFTTNQGDCPLIVQ 87
Query: 77 FASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
FA+N+ A + V P+ NG+D+NCGCPQRWA+ EGYG L++K
Sbjct: 88 FAANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINK 133
>ZFIN|ZDB-GENE-040801-233 [details] [associations]
symbol:dus4l "dihydrouridine synthase 4-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
ZFIN:ZDB-GENE-040801-233 Gene3D:3.20.20.70 GO:GO:0050660
HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
CTD:11062 HOVERGEN:HBG053313 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:BX072538 IPI:IPI00487005
RefSeq:NP_001003490.2 UniGene:Dr.89736 Ensembl:ENSDART00000130623
GeneID:445096 KEGG:dre:445096 InParanoid:Q5RIX6 NextBio:20831860
Uniprot:Q5RIX6
Length = 307
Score = 301 (111.0 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 56/108 (51%), Positives = 77/108 (71%)
Query: 15 KNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLV 74
K ++ C + SKL FR LVR ++ D+CFTPMIIA F++S+KAR++EF+T+ D PL+
Sbjct: 15 KPVRVCAPMVRYSKLAFRTLVRKYDCDVCFTPMIIAADFMRSAKARDSEFTTNKNDRPLI 74
Query: 75 VQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
VQFA+ + A V+P +GVDLNCGCPQRWA+ EGYG L++K
Sbjct: 75 VQFAAKDAQTLADAACVVSPFSDGVDLNCGCPQRWAMSEGYGACLINK 122
>MGI|MGI:1919166 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 MGI:MGI:1919166 Gene3D:3.20.20.70
GO:GO:0050660 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 HOVERGEN:HBG053313
KO:K05545 OrthoDB:EOG4ZCT4T EMBL:AK010138 EMBL:BC109351
IPI:IPI00109359 RefSeq:NP_082278.1 UniGene:Mm.62979
ProteinModelPortal:Q32M08 SMR:Q32M08 STRING:Q32M08 PRIDE:Q32M08
Ensembl:ENSMUST00000020977 GeneID:71916 KEGG:mmu:71916
UCSC:uc007nhr.1 GeneTree:ENSGT00550000074907 InParanoid:Q32M08
NextBio:334944 Bgee:Q32M08 CleanEx:MM_DUS4L Genevestigator:Q32M08
GermOnline:ENSMUSG00000020648 Uniprot:Q32M08
Length = 324
Score = 300 (110.7 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 56/114 (49%), Positives = 80/114 (70%)
Query: 17 LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
+K C + SKL FR LVR ++ DLC+TPMIIA F++S KAR++EF+T+ D PL+VQ
Sbjct: 28 VKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIIAADFVRSIKARDSEFTTNQGDCPLIVQ 87
Query: 77 FASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK-QRTHPLL 129
FA+N+ A V P+ NG+D+NCGCPQRWA+ +GYG L++K + H ++
Sbjct: 88 FAANDARLLSDAALLVCPYANGIDINCGCPQRWAMADGYGACLINKPELVHDMV 141
>UNIPROTKB|F1NHN2 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine synthase" species:9031
"Gallus gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 OMA:AGPMVRY GeneTree:ENSGT00550000074907
EMBL:AC147596 IPI:IPI00813011 Ensembl:ENSGALT00000039460
Uniprot:F1NHN2
Length = 307
Score = 293 (108.2 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 54/106 (50%), Positives = 73/106 (68%)
Query: 17 LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
+K C + SKL FR LVR + DLC+TPM++A F++S+KAR++EF+T+ D PL+VQ
Sbjct: 16 VKICAPMVRYSKLAFRTLVRRYGCDLCYTPMVVAADFVRSAKARDSEFTTNRGDNPLIVQ 75
Query: 77 FASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
FA+ A V P +GVDLNCGCPQRWA+ EGYG L++K
Sbjct: 76 FAAKEAQVLCDAALLVCPFADGVDLNCGCPQRWAMAEGYGACLINK 121
>RGD|1311445 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 RGD:1311445 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
IPI:IPI00914747 ProteinModelPortal:D4A3L7
Ensembl:ENSRNOT00000011068 UCSC:RGD:1311445 ArrayExpress:D4A3L7
Uniprot:D4A3L7
Length = 324
Score = 293 (108.2 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 53/106 (50%), Positives = 76/106 (71%)
Query: 17 LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
+K C + SKL FR LVR ++ DLC+TPMI+A F++S KAR++EF+T+ D PL+VQ
Sbjct: 28 VKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSVKARDSEFTTNQGDCPLIVQ 87
Query: 77 FASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
FA+N+ A V P+ +G+D+NCGCPQRWA+ +GYG L++K
Sbjct: 88 FAANDARLLSDAALIVCPYASGIDINCGCPQRWAMADGYGACLINK 133
>UNIPROTKB|D4A0T1 [details] [associations]
symbol:Dus4l "Protein Dus4l" species:10116 "Rattus
norvegicus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
RGD:1311445 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CH473947
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 KO:K05545
OrthoDB:EOG4ZCT4T GeneTree:ENSGT00550000074907 IPI:IPI00951041
RefSeq:NP_001129275.1 UniGene:Rn.41975 Ensembl:ENSRNOT00000068419
GeneID:366593 KEGG:rno:366593 NextBio:689691 Uniprot:D4A0T1
Length = 321
Score = 293 (108.2 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 53/106 (50%), Positives = 76/106 (71%)
Query: 17 LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
+K C + SKL FR LVR ++ DLC+TPMI+A F++S KAR++EF+T+ D PL+VQ
Sbjct: 28 VKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSVKARDSEFTTNQGDCPLIVQ 87
Query: 77 FASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
FA+N+ A V P+ +G+D+NCGCPQRWA+ +GYG L++K
Sbjct: 88 FAANDARLLSDAALIVCPYASGIDINCGCPQRWAMADGYGACLINK 133
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 291 (107.5 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 97/340 (28%), Positives = 158/340 (46%)
Query: 200 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 259
K H+ V D SG+SDKS+ L+ V+ G + + EH + + D
Sbjct: 8 KVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLVSTSD 67
Query: 260 SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
+ + S ++ + WD+ S +R A D+ITSV + ST L +G
Sbjct: 68 NKQLFSCAEKQ-LYQWDIASGQ----VIRRFQNA---HNDTITSVCVNLDSTL--LFSGS 117
Query: 320 LTKLVFAF--RCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEA 377
+LV A+ R K +N + Q L D + S + + T I+ ++S
Sbjct: 118 SDRLVKAWDLRTKSINPV--------QILDDAKDTITSIIVNEQT-ITHNHSHGHGHSHG 168
Query: 378 RDSITSVHV-SDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCST 436
++ H + E++T+S+D IR YD+R G LVT PI T+D +C + T
Sbjct: 169 NNNNNQPHTHTQKEVITSSVDGCIRTYDVRMGTLVTYEDTIPISSVSITKDKKCFIASCT 228
Query: 437 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIS 496
DE ++L D + E L+EYKGHK+ ++I C + DS I GS D Y ++L+ +S
Sbjct: 229 DETVKLIDIDSYETLKEYKGHKNKVYKINSCSNFDDSLIISGSEDNDFYIYELLSGKLLS 288
Query: 497 TLI-HSVGKAVVNSLCSHPTRKH-IMSACGNNVKLWTAEE 534
L HS ++ + SHP++ I S+ +++W E
Sbjct: 289 KLSGHS---NIITHVDSHPSKNQFITSSTDCTIRIWDQSE 325
Score = 239 (89.2 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 55/167 (32%), Positives = 99/167 (59%)
Query: 155 LTVNRELFVLSGLMHT-RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213
++ N+ L SG + ++ DG YCL+ SDK IKL+N + ++ ++ H + + D
Sbjct: 4 ISCNKVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLV 63
Query: 214 AACDSSQIASGASDKSVILWEVTTGQPVRRWRE-HASKVTCVKFNEDSSVVISGSQDNTV 272
+ D+ Q+ S A +K + W++ +GQ +RR++ H +T V N DS+++ SGS D V
Sbjct: 64 STSDNKQLFSCA-EKQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSDRLV 122
Query: 273 MMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS-TKNHLSNG 318
WD++++S +P+Q+ L +A+D+ITS+ ++ T NH S+G
Sbjct: 123 KAWDLRTKSINPVQI------LDDAKDTITSIIVNEQTITHNH-SHG 162
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 282 (104.3 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 75/271 (27%), Positives = 127/271 (46%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310
+ VK+N V++ + V +W+VKS + C++E + I + + S
Sbjct: 17 INVVKYNRTGKYVLAAGNERVVRLWNVKSGA-------CIHEYAGHGHE-ILDLDLVYDS 68
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD--FLGSTQIGDVTPI-SIH 367
TK G V+ ++ L G L + D L S +
Sbjct: 69 TKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCR 128
Query: 368 NSCF---QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACF 424
++ F Q L +A+DS++S+ +++H I+T S D +R YDIR G L +DY PI
Sbjct: 129 SNSFSPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLSSDYFSHPITSVKT 188
Query: 425 TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 484
++ L S + + L D+ TG++L+ Y G K+ ++R+ + ++ +F GS DGK+
Sbjct: 189 SKSASFSLISSLNSSIHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKV 248
Query: 485 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 515
Y W L + +QI T VG +V + HPT
Sbjct: 249 YLWDLENETQI-TSTSVVGTPIVTDISCHPT 278
Score = 277 (102.6 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 83/274 (30%), Positives = 134/274 (48%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G Y L G+++ ++LWN + Y GH HE+ D DS++ AS DK + +W+V
Sbjct: 26 GKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDV 85
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALK 295
TG+ RR H +++ +++NEDSS++ SGS D+ V +WD +S S PIQV L
Sbjct: 86 NTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQV------LA 139
Query: 296 EARDSITSV----HSLVK-STKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLL 350
+A+DS++S+ H +V ST L + K + Y + ++ V S L+
Sbjct: 140 DAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLS--SDYFSHPITSVKTSKSASFSLI 197
Query: 351 DFLGST-QIGDVTPISIHNSCFQALKEARDSI-TSVHVSDHEILTASLDCRIRRYDIRTG 408
L S+ + D I S + LK + +S + S+ + + S D ++ +D+
Sbjct: 198 SSLNSSIHLLDQETGKILKS-YIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENE 256
Query: 409 NLVTD--YVGEPIVD--ACF-TRDCQCILTCSTD 437
+T VG PIV +C T D I T D
Sbjct: 257 TQITSTSVVGTPIVTDISCHPTMDDFIIATVHGD 290
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 58/227 (25%), Positives = 101/227 (44%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
D + +CG DK I++W+ + + GGH ++N DSS +ASG+ D V LW+
Sbjct: 67 DSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWD 126
Query: 235 VTTGQ--PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI- 285
+ P++ + V+ + E ++++GS D T+ +D++ + HPI
Sbjct: 127 CRSNSFSPIQVLADAKDSVSSIDIAEH--LIVTGSTDGTLRTYDIRKGTLSSDYFSHPIT 184
Query: 286 QVRCLNEALKEARDSI-TSVHSLVKSTKNHLSNGL-LTKLVFAFRCKYLNGLLSGVLMST 343
V+ A S+ +S+H L + T L + + L + + R + N + V +
Sbjct: 185 SVKTSKSASFSLISSLNSSIHLLDQETGKILKSYIGLKNMEYRVRSSF-NQSETIVFSGS 243
Query: 344 QHLMVLL-DFLGSTQIGDV----TPISIHNSCFQALKEARDSITSVH 385
+ V L D TQI TPI SC + + I +VH
Sbjct: 244 EDGKVYLWDLENETQITSTSVVGTPIVTDISCHPTMDDF--IIATVH 288
>DICTYBASE|DDB_G0291360 [details] [associations]
symbol:dus4l "tRNA-dihydrouridine synthase 4-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 dictyBase:DDB_G0291360
GO:GO:0005739 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042 GO:GO:0017150
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY RefSeq:XP_635163.1
ProteinModelPortal:Q54ES7 STRING:Q54ES7 EnsemblProtists:DDB0238074
GeneID:8628109 KEGG:ddi:DDB_G0291360 ProtClustDB:CLSZ2429554
Uniprot:Q54ES7
Length = 344
Score = 262 (97.3 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 55/136 (40%), Positives = 81/136 (59%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFV 86
S+L FR LV+ D+ +TPMI+A F +S AR+++F+ + D PL+VQF NN ++ V
Sbjct: 66 SRLPFRMLVKKWGCDITYTPMIMAAEFNRSEAARDSDFTINKLDEPLIVQFGVNNAEELV 125
Query: 87 RATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHP-LLFSLPRTITRILYELPK 145
A + V +C G+D+NCGCPQRW +KEG+G LL HP ++ + + I + +P
Sbjct: 126 SAAEKVKDYCQGIDINCGCPQRWVMKEGFGANLL----LHPERIYDMVKQINNRV-PIPI 180
Query: 146 EWSIRVYRPLTVNREL 161
IRV L EL
Sbjct: 181 SIKIRVQSDLKDTIEL 196
Score = 40 (19.1 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 365 SIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIR 401
S H + A+K +D++T ++ ++ T S IR
Sbjct: 219 SSHPVDYDAIKLVKDNVTLPVFANGDVFTLSQSNEIR 255
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 303 (111.7 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 106/398 (26%), Positives = 183/398 (45%)
Query: 148 SIRVYRPLT--VNRELFVLSGLMHT-RFPVDGSYCLTCGSDKK-IKLWNPYRNLLLKTYG 203
+I+V+ P T + + L SG + + F DG L GS+K +KLWNP LL+T
Sbjct: 899 TIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK-LASGSEKNTVKLWNPATGELLQTLE 957
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GH+ V + D Q+AS +SD ++ LW TTG+ + ++ H + V F+ D +
Sbjct: 958 GHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHL 1017
Query: 264 ISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317
+SGS DNT+ +WD+ +S H V + + + + + +S+ S +K + +
Sbjct: 1018 VSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDS--AT 1075
Query: 318 GLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEA 377
G L + + + G+ S L+ + G+ ++ + P++ Q L
Sbjct: 1076 GELQRTLEG----HSQGVRSVTFSPDGKLLASNSYDGTIKLWN--PLT--GELQQTLTGR 1127
Query: 378 RDSITSVHVSDH--EILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILT 433
D + SV S ++ + D I+ +D TG L+ G + I F+ D + + +
Sbjct: 1128 SDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLAS 1187
Query: 434 CSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDS 492
S D+ +L+D ATGELL+ ++GH +E S D ++ SS G+ K W V
Sbjct: 1188 GSYDQTAKLWDPATGELLQIFEGHSKW---VESVAFSPDGKLLASSSYGETIKLWDPVTG 1244
Query: 493 SQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+ TL A S+ P + S + K+W
Sbjct: 1245 ELLQTLNDPDESA--GSVAFSPDGNRLASVDIFDTKIW 1280
Score = 198 (74.8 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 88/372 (23%), Positives = 151/372 (40%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + D IK+W+ L +T H+ V + D +AS + D ++
Sbjct: 842 FAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIK 901
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD------VKSRSHHPI 285
+W TG+ + + V V F+ D + SGS+ NTV +W+ +++ H
Sbjct: 902 VWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQ 961
Query: 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMST-- 343
VR + A + S S T L N +L F+ L + V S
Sbjct: 962 SVRSV--AFSPDGKQLASSSS---DTTIKLWNSTTGELQQTFKGHDL--WIRAVAFSPDG 1014
Query: 344 QHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVS--DHEILTASLDCRIR 401
+HL+ D + ++ D+ + Q+L++ S+ +V S D ++ ++SLD I+
Sbjct: 1015 KHLVSGSDD-NTIKLWDLATSELQ----QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIK 1069
Query: 402 RYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKS 459
+D TG L G + + F+ D + + + S D ++L++ TGEL + G
Sbjct: 1070 LWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSD 1129
Query: 460 GDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 519
+ D K Q+ G D I W + TL + + S+ P K +
Sbjct: 1130 WVDSVAFSPDGK--QLASGYYDSTIKLWDSATGELLQTLEGHSDR--IQSVVFSPDGKLL 1185
Query: 520 MSAC-GNNVKLW 530
S KLW
Sbjct: 1186 ASGSYDQTAKLW 1197
Score = 171 (65.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 128 LLFSLPRTITRILYELPKE-WSI--RVYRPLTVNRELFV--LSGLMHTRFPVDGSYCLTC 182
L+FS +ITR ++ WS +V + + ++ L + F DG ++
Sbjct: 709 LMFSPEGSITRRIFNYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSG 768
Query: 183 GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR 242
D +K+W+P LL+T GH+ V + D +ASG+ D ++ LW+ TG+ ++
Sbjct: 769 SYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQ 828
Query: 243 RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+ H + V F D + S S D+T+ +WD+
Sbjct: 829 TFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDL 863
Score = 169 (64.5 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 39/133 (29%), Positives = 70/133 (52%)
Query: 148 SIRVYRPLT--VNRELFVLSGLMHT-RFPVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYG 203
+++++ P T + + L SG + + F DG L GS D I LW+ LL+T+
Sbjct: 773 TVKIWDPATGELLQTLDGHSGTVESLAFSPDGKL-LASGSYDNTIDLWDSATGELLQTFE 831
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GH H + A D ++AS + D ++ +W++ TG+ + H+ V V F+ D ++
Sbjct: 832 GHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLL 891
Query: 264 ISGSQDNTVMMWD 276
S S D+T+ +W+
Sbjct: 892 ASSSLDSTIKVWN 904
Score = 127 (49.8 bits), Expect = 0.00034, P = 0.00034
Identities = 44/165 (26%), Positives = 74/165 (44%)
Query: 372 QALKEARDSITSVHVSDH--EILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRD 427
Q L+ + SV S ++++ S D ++ +D TG L+ G + F+ D
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 428 CQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
+ + + S D + L+D ATGELL+ ++GH + + D K+ + S D I W
Sbjct: 804 GKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE--LASASDDSTIKIW 861
Query: 488 QLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLW 530
L TL HS V S+ P K + S+ + +K+W
Sbjct: 862 DLATGELQQTLDSHSQS---VRSVAFSPDGKLLASSSLDSTIKVW 903
Score = 61 (26.5 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 381 ITSVHVS-DHEIL-TASLDCRIRRYDIRTGNLVTDYVGEPIVDA---CFTRDCQCILTCS 435
+ SV S D ++L ++S I+ +D TG L+ + +P A F+ D + +
Sbjct: 1215 VESVAFSPDGKLLASSSYGETIKLWDPVTGELLQT-LNDPDESAGSVAFSPDGNRLASVD 1273
Query: 436 TDECLRLFDKATGELLEEYKGH 457
+ +++D ATGELL+ KGH
Sbjct: 1274 IFDT-KIWDPATGELLQALKGH 1294
>SGD|S000004397 [details] [associations]
symbol:DUS4 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA;ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=ISS;IMP] [GO:0002943 "tRNA
dihydrouridine synthesis" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
SGD:S000004397 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:BK006945
EMBL:U19729 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 OrthoDB:EOG4PZNGJ EMBL:AY558586
PIR:S55961 RefSeq:NP_013509.1 ProteinModelPortal:Q06063 SMR:Q06063
IntAct:Q06063 STRING:Q06063 PaxDb:Q06063 EnsemblFungi:YLR405W
GeneID:851121 KEGG:sce:YLR405W CYGD:YLR405w
BioCyc:MetaCyc:MONOMER-16679 NextBio:967845 Genevestigator:Q06063
GermOnline:YLR405W Uniprot:Q06063
Length = 367
Score = 268 (99.4 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 56/136 (41%), Positives = 85/136 (62%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFV 86
SKL FRQL R +NVD+ ++PMI+A ++++ AR ++ ST+ EDTPL+VQ NN D +
Sbjct: 50 SKLPFRQLCREYNVDIVYSPMILAREYVRNEHARISDLSTNNEDTPLIVQVGVNNVADLL 109
Query: 87 RATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTIT-RILYELPK 145
+ + VAP+C+G+ +NCGCP + I+EG GCAL+ LL S+ + + +L
Sbjct: 110 KFVEMVAPYCDGIGINCGCPIKEQIREGIGCALIYNS---DLLCSMVHAVKDKYGDKLRI 166
Query: 146 EWSIRVYRPLTVNREL 161
E IR++ L EL
Sbjct: 167 ETKIRIHEALDETVEL 182
>UNIPROTKB|F8WEL2 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC004839 EMBL:AC002381 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HGNC:HGNC:21517 IPI:IPI00925668
ProteinModelPortal:F8WEL2 SMR:F8WEL2 Ensembl:ENST00000443233
ArrayExpress:F8WEL2 Bgee:F8WEL2 Uniprot:F8WEL2
Length = 119
Score = 256 (95.2 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 48/92 (52%), Positives = 66/92 (71%)
Query: 17 LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
+K C + SKL FR LVR ++ DLC+TPMI+A F+KS KAR++EF+T+ D PL+VQ
Sbjct: 28 VKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTTNQGDCPLIVQ 87
Query: 77 FASNNHDDFVRATQYVAPHCNGVDLNCGCPQR 108
FA+N+ A + V P+ NG+D+NCGCPQR
Sbjct: 88 FAANDARLLSDAARIVCPYANGIDINCGCPQR 119
>POMBASE|SPCC777.15 [details] [associations]
symbol:SPCC777.15 "tRNA dihydrouridine synthase Dus4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=ISO] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
PomBase:SPCC777.15 GO:GO:0005739 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 PANTHER:PTHR11082
KO:K05545 OMA:AGPMVRY PIR:T11721 RefSeq:NP_588262.1
ProteinModelPortal:O74553 STRING:O74553 EnsemblFungi:SPCC777.15.1
GeneID:2538996 KEGG:spo:SPCC777.15 OrthoDB:EOG4PZNGJ
NextBio:20800171 Uniprot:O74553
Length = 326
Score = 254 (94.5 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 55/136 (40%), Positives = 81/136 (59%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFV 86
SKL FRQLVR +N D+ +TPMI+A F+ K R +FST+ D L++QF ++
Sbjct: 31 SKLPFRQLVRDYNTDIVYTPMILAKEFLHP-KGRYFDFSTNDADASLILQFGVDDPVILE 89
Query: 87 RATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK-QRTHPLLFSLPRTITRILYELPK 145
+A Q V P+ +G+ +NCGCPQ WAI+EG G ALL + ++ H L+ ++ T+
Sbjct: 90 KAAQLVGPYVDGIGINCGCPQTWAIQEGIGSALLDEPEKVHKLVRAVKSTLGE---SFCT 146
Query: 146 EWSIRVYRPLTVNREL 161
E IR+ + L R L
Sbjct: 147 EVKIRIAKDLNKTRHL 162
>WB|WBGene00016674 [details] [associations]
symbol:C45G9.2 species:6239 "Caenorhabditis elegans"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:FO080873 PIR:A88449
RefSeq:NP_498078.2 ProteinModelPortal:Q09504 SMR:Q09504
STRING:Q09504 EnsemblMetazoa:C45G9.2 GeneID:183479
KEGG:cel:CELE_C45G9.2 UCSC:C45G9.2 CTD:183479 WormBase:C45G9.2
InParanoid:Q09504 NextBio:921288 Uniprot:Q09504
Length = 284
Score = 247 (92.0 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 53/98 (54%), Positives = 68/98 (69%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFV 86
SKL FRQLVR ++VD+CFTPMI A +FI+S K R++E S D+PL+VQFA++ D FV
Sbjct: 5 SKLAFRQLVRVYDVDVCFTPMIYAKNFIESEKCRSSELSVCEGDSPLIVQFATD--DPFV 62
Query: 87 --RATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
A + V GVDLNCGCP+ +G+G ALLSK
Sbjct: 63 LSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSK 100
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 171 (65.3 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 68/273 (24%), Positives = 117/273 (42%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
+ GS DK KLW+ T+ GH E+ + S+ +A+G+ D + LW++ G
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG 209
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQV-RC--LNEALK 295
+ V R H++++ + FN +I+GS D+TV++WD + I + C ++ A
Sbjct: 210 EEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASF 269
Query: 296 EARDSITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLG 354
S+ S+ K+ K +NG K V A + + +L T L+ G
Sbjct: 270 NWDCSLILTGSMDKTCKLWDATNG---KCV-ATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 355 STQIGDVTPISIHNSCFQALK--EARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVT 412
+ +I C L+ E S S + + +LT S D R +D +TG +
Sbjct: 326 TARIFSAAT----RKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQ 381
Query: 413 DYVG--EPIVDACFTRDCQCILTCSTDECLRLF 443
G + I F ++T S D R++
Sbjct: 382 VLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 169 (64.5 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 39/107 (36%), Positives = 60/107 (56%)
Query: 176 GSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD--SSQIASGASDKSVIL 232
GS C GS D+ KLW+ L T GH + V A A + +IA+G+ DK+ L
Sbjct: 104 GS-CFITGSYDRTCKLWDTASGEELNTLEGHRNVVY-AIAFNNPYGDKIATGSFDKTCKL 161
Query: 233 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
W V TG+ +R H +++ C+ FN S++V +GS D T +WD+++
Sbjct: 162 WSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQN 208
Score = 135 (52.6 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 26/109 (23%), Positives = 54/109 (49%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
++ + F G T +D ++++ + GH E++ + + + +G+S
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSS 365
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
DK+ +W+ TGQ ++ H ++ FN ++VI+GS+DNT +W
Sbjct: 366 DKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 134 (52.2 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 40/154 (25%), Positives = 67/154 (43%)
Query: 383 SVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECL 440
S + S I+T S D + +D TG V +G I A F DC ILT S D+
Sbjct: 226 SFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTC 285
Query: 441 RLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 500
+L+D G+ + GH D ++ C D I S+DG + I+ L
Sbjct: 286 KLWDATNGKCVATLTGHD--DEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEG 343
Query: 501 SVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAE 533
G+ ++ + +P H+++ + ++W A+
Sbjct: 344 HEGE--ISKISFNPQGNHLLTGSSDKTARIWDAQ 375
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D S LT DK KLW+ + T GH E+ D+ IA+ ++D +
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
++ T + + + H +++ + FN + +++GS D T +WD ++
Sbjct: 329 IFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376
Score = 113 (44.8 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 33/142 (23%), Positives = 61/142 (42%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATG 448
ILT S+D + +D G V G + I+D+CF + I T S D R+F AT
Sbjct: 276 ILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR 335
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVN 508
+ + + +GH+ +I + + + + GSSD W + Q ++ + +
Sbjct: 336 KCIAKLEGHEGEISKIS--FNPQGNHLLTGSSDKTARIWD-AQTGQCLQVLEGHTDEIFS 392
Query: 509 SLCSHPTRKHIMSACGNNVKLW 530
++ I + N ++W
Sbjct: 393 CAFNYKGNIVITGSKDNTCRIW 414
Score = 87 (35.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 20/88 (22%), Positives = 39/88 (44%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L K H + + S +G+ D++ LW+ +G+ + H + V + FN
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 258 ED-SSVVISGSQDNTVMMWDVKS-RSHH 283
+ +GS D T +W V++ + +H
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYH 171
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 185 (70.2 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 43/133 (32%), Positives = 73/133 (54%)
Query: 153 RPLTVN-RELFVLSGLMH----TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAH 207
+P +VN R+ F+L G + RF D S + G+D +K+W L+ T+ GH
Sbjct: 160 KPESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLA 219
Query: 208 EVNDATAACDSSQIASGASDKSVILWEVTTGQP-VRRWREHASKVTCVKFNEDSSVVISG 266
++ + + D + IASG+ DK++ LW V TG+ + H + V + F+ ++++SG
Sbjct: 220 GISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSG 279
Query: 267 SQDNTVMMWDVKS 279
S D V +WDV+S
Sbjct: 280 SYDEAVFLWDVRS 292
Score = 142 (55.0 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GH V+ + D+S IASG +D +V +W +TG+ + + H + ++ + ++ D + +
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATI 233
Query: 264 ISGSQDNTVMMWDVKSRSHHP 284
SGS D T+ +W+V + HP
Sbjct: 234 ASGSDDKTIRLWNVLTGKAHP 254
Score = 127 (49.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D+ + LW+ ++K+ H+ V+ D + IAS A+D V +W+ +TG
Sbjct: 276 LVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTG 335
Query: 239 QPVRRW-REHASKVTCVKFNEDSSVVISGSQDNTVMMWD-VKSR 280
Q +R E V+ VKF+ + V++ + D+ V +WD V+ R
Sbjct: 336 QCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGR 379
Score = 125 (49.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 34/142 (23%), Positives = 66/142 (46%)
Query: 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIA 222
L+G+ + DG+ + DK I+LWN T + GH + V + + +
Sbjct: 218 LAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLV 277
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
SG+ D++V LW+V + + ++ H+ V+ + D +++ S + D V +WD +
Sbjct: 278 SGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTG-- 335
Query: 283 HPIQVRCLNEALKEARDSITSV 304
+CL + E ++SV
Sbjct: 336 -----QCLRTLVHEDNPPVSSV 352
Score = 116 (45.9 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 45/176 (25%), Positives = 75/176 (42%)
Query: 372 QALKEARDSITSVHVSDHEILTASL--DCRIRRYDIRTGNLVTDYVGE---PIVDACFTR 426
++L D ++ + V L AS D +R +D TG + V E P+ F+
Sbjct: 297 KSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSP 356
Query: 427 DCQCILTCSTDECLRLFDKATGELLEEYKGHK------SGDFRI--ECCLDSKDSQIFC- 477
+ + +L + D+C+RL+D G L+ Y+GH SG F + + F
Sbjct: 357 NGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAV 416
Query: 478 -GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLW 530
GS DG I W +V + + G + CS + ++S CG V++W
Sbjct: 417 SGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVS-CGLDGTVRVW 471
Score = 50 (22.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/57 (22%), Positives = 25/57 (43%)
Query: 435 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS-QIFCGSSDGKIYKWQLV 490
S D + +D T ++L+ + H ++ C + + CG DG + W+ V
Sbjct: 419 SEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGL-DGTVRVWEEV 474
Score = 44 (20.5 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 420 VDACFTRDCQCILTCSTDECLRLFDKATGE 449
VD C T + + +++C D +R++++ E
Sbjct: 448 VDTCSTGEGRFMVSCGLDGTVRVWEEVGPE 477
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 171 (65.3 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 176 GSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD--SSQIASGASDKSVIL 232
GS C GS D+ KLW+ L T GH + V A A + +IA+G+ DK+ L
Sbjct: 104 GS-CFITGSYDRTCKLWDTASGEELHTLEGHRNVVY-AIAFNNPYGDKIATGSFDKTCKL 161
Query: 233 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
W V TG+ +R H +++ C+ FN S++V +GS D T +WD++S
Sbjct: 162 WSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQS 208
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 66/272 (24%), Positives = 119/272 (43%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
+ GS DK KLW+ T+ GH E+ + S+ +A+G+ D + LW++ +G
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG 209
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPIQVRC--LNEALK 295
+ V H++++ + FN + +I+GS D+TV +W+ + R + + C ++ A+
Sbjct: 210 EEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVF 269
Query: 296 EARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGS 355
S+ S+ K+ K L + + K V A + + +L T L+ G+
Sbjct: 270 NWDCSLILTGSMDKTCK--LWDAVNGKCV-ATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 356 TQIGDVTPISIHNSCFQALK--EARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTD 413
+I C L+ E S S + + +LT S D R +D +TG +
Sbjct: 327 ARIFSAAT----RECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQV 382
Query: 414 YVG--EPIVDACFTRDCQCILTCSTDECLRLF 443
G + I F I+T S D R++
Sbjct: 383 LEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 41/175 (23%), Positives = 77/175 (44%)
Query: 109 WAIKEGYGCALLSKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSG-- 166
W I+ G L+ + S + RI+ + ++ V+ T R+++ L G
Sbjct: 204 WDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITG-SFDHTVTVWEADT-GRKVYTLIGHC 261
Query: 167 --LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 224
+ F D S LT DK KLW+ + T GH E+ D+ IA+
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATA 321
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
++D + ++ T + V + H +++ + FN + +++GS D T +WD ++
Sbjct: 322 SADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/109 (22%), Positives = 54/109 (49%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
++ + F G T +D ++++ + GH E++ + +++ +G+S
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSS 365
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
DK+ +W+ TGQ ++ H ++ FN ++I+GS+DNT +W
Sbjct: 366 DKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 125 (49.1 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 37/154 (24%), Positives = 67/154 (43%)
Query: 383 SVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECL 440
S + S + I+T S D + ++ TG V +G I A F DC ILT S D+
Sbjct: 226 SFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTC 285
Query: 441 RLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 500
+L+D G+ + GH D ++ C D I S+DG + ++ L
Sbjct: 286 KLWDAVNGKCVATLTGHD--DEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEG 343
Query: 501 SVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAE 533
G+ ++ + +P +++ + ++W A+
Sbjct: 344 HEGE--ISKISFNPQGNRLLTGSSDKTARIWDAQ 375
Score = 117 (46.2 bits), Expect = 0.00086, P = 0.00086
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 160 ELFVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 215
E+F L+G ++ F G+ +T D + +W + T GH E++ A
Sbjct: 211 EVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN 270
Query: 216 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
D S I +G+ DK+ LW+ G+ V H ++ F+ ++ + S D T ++
Sbjct: 271 WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF 330
Query: 276 DVKSR 280
+R
Sbjct: 331 SAATR 335
Score = 100 (40.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 35/128 (27%), Positives = 51/128 (39%)
Query: 365 SIHNSCFQALKEARDSI--TSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEP--IV 420
+++ C L D I + + I TAS D R + T VT G I
Sbjct: 290 AVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEIS 349
Query: 421 DACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS 480
F +LT S+D+ R++D TG+ L+ +GH F C + K I GS
Sbjct: 350 KISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF--SCAFNYKGDIIITGSK 407
Query: 481 DGKIYKWQ 488
D W+
Sbjct: 408 DNTCRIWR 415
Score = 87 (35.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 20/88 (22%), Positives = 39/88 (44%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L K H + + S +G+ D++ LW+ +G+ + H + V + FN
Sbjct: 84 LFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 258 ED-SSVVISGSQDNTVMMWDVKS-RSHH 283
+ +GS D T +W V++ + +H
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYH 171
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 41/137 (29%), Positives = 72/137 (52%)
Query: 147 WSI-RVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH 205
WS R Y PL + L+ + +F + +Y T +DK ++LW+ + ++ + GH
Sbjct: 407 WSFDRTY-PLRIYAGH--LADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGH 463
Query: 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVIS 265
V + + +AS D+ + LW++ +G + R H +T + F+ DSS+V S
Sbjct: 464 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVAS 523
Query: 266 GSQDNTVMMWDVKSRSH 282
S DN+V +WD++S SH
Sbjct: 524 ASMDNSVRVWDIRS-SH 539
Score = 179 (68.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 160 ELFVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDAT 213
E+ VL G + TRF D S L+C D I+ W+ + N +L Y GHA+ V D
Sbjct: 330 EMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDLD 387
Query: 214 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 273
+ S AS + D++ LW P+R + H + V CVKF+ +S+ + +GS D TV
Sbjct: 388 ISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 447
Query: 274 MWDVK 278
+W +
Sbjct: 448 LWSTQ 452
Score = 145 (56.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
Y + D+ +LW+ R L+ Y GH +V+ +S+ +A+G++DK+V LW
Sbjct: 394 YFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 453
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
G VR + H V + F+ + + S +D + +WD+ S
Sbjct: 454 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 495
Score = 115 (45.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 32/116 (27%), Positives = 56/116 (48%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRL 442
H + + + T S D +R + + GN V + G P++ F+ + + + + D+ L+L
Sbjct: 431 HPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKL 490
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQLVDSSQIST 497
+D A+G L +E +GH I S DS + +S D + W + SS ST
Sbjct: 491 WDLASGTLYKELRGHTDN---ITSLTFSPDSSLVASASMDNSVRVWD-IRSSHCST 542
Score = 55 (24.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 371 FQALKEARDSITSVHVS-DHEIL-TASLDCRIRRYDIRTGNLVT 412
++ L+ D+ITS+ S D ++ +AS+D +R +DIR+ + T
Sbjct: 499 YKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCST 542
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 173 (66.0 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+C DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 142 (55.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 45/178 (25%), Positives = 86/178 (48%)
Query: 114 GYGCALLSKQRTHPLLFSLPRTITRILYELPK-EWSIRVYRPLTVNRELFVLSGLMHTRF 172
G+ L + T L S R T I+++L + E + + + FV ++ +
Sbjct: 16 GWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-- 73
Query: 173 PVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVIL 232
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ L
Sbjct: 74 --DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 233 WEVTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
W T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 132 WN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNH 188
Score = 107 (42.7 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ + +++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVNVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 68 (29.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>CGD|CAL0003746 [details] [associations]
symbol:orf19.966 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
CGD:CAL0003746 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AACQ01000063
EMBL:AACQ01000062 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05545 RefSeq:XP_716804.1
RefSeq:XP_716864.1 ProteinModelPortal:Q5A4Y0 STRING:Q5A4Y0
GeneID:3641524 GeneID:3641580 KEGG:cal:CaO19.8581
KEGG:cal:CaO19.966 Uniprot:Q5A4Y0
Length = 339
Score = 230 (86.0 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 40/95 (42%), Positives = 66/95 (69%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFV 86
SKL FR+L R ++VD+ +TPMI+A F+++ AR+ +F+T+ D ++VQ NN DDF+
Sbjct: 37 SKLPFRELCRFYDVDIVYTPMILAREFVRNEVARSTDFTTNDSDKCVIVQVGVNNVDDFM 96
Query: 87 RATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLS 121
+ + + P +G+ +NCGCP + ++EG G AL+S
Sbjct: 97 KFIEMIHPFVDGIGINCGCPIKEQVREGIGAALMS 131
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 235 (87.8 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 89/327 (27%), Positives = 137/327 (41%)
Query: 176 GSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD--SSQIASGASDKSVIL 232
GS C GS D+ K+W+ L T GH + V A A + +IA+G+ DK+ L
Sbjct: 104 GS-CFITGSYDRTCKVWDTASGEELHTLEGHRNVVY-AIAFNNPYGDKIATGSFDKTCKL 161
Query: 233 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNE 292
W TG+ +R H +++ C+ FN S+VV +GS D T +WD++S L E
Sbjct: 162 WSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAE 221
Query: 293 ALKEARDSITSVHSLVKSTKNHL------SNGLLTKLVFAFRCKYLNGLLSGVLMSTQHL 346
+ + D TS ++ + +H S G + C + S L S
Sbjct: 222 IISLSFD--TSGDRIITGSFDHTVVVWDASTGRKVHTLIG-HCAEI----SSALFSWDCS 274
Query: 347 MVLLDFLGST-QIGDVTPISIHNSCFQALKEARDSI--TSVHVSDHEILTASLDCRIRRY 403
++L + T + D T C L D I + + I TAS D R Y
Sbjct: 275 LILTGSMDKTCMLWDATS----GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
Query: 404 DIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
+ T +T G I F +LT S+D+ R++D TG+ L+ +GH
Sbjct: 331 NATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEI 390
Query: 462 FRIECCLDSKDSQIFCGSSDGKIYKWQ 488
F C + K + + GS D W+
Sbjct: 391 F--SCAFNYKGNIVITGSKDNSCRIWR 415
Score = 145 (56.1 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 74/349 (21%), Positives = 148/349 (42%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L K H + + S +G+ D++ +W+ +G+ + H + V + FN
Sbjct: 84 LFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 258 ED-SSVVISGSQDNTVMMWDVKSRS--H----HPIQVRCLN---EALKEARDSITSVHSL 307
+ +GS D T +W ++ H H ++ CL+ ++ A S+ + L
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKL 203
Query: 308 --VKSTKNHLS-NGLLTKLV-FAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTP 363
++S + ++ G L +++ +F + +++G S H +V+ D ST T
Sbjct: 204 WDIQSGEEVVTLTGHLAEIISLSFDTSG-DRIITG---SFDHTVVVWD--ASTGRKVHTL 257
Query: 364 ISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVD 421
I H C E ++ S S ILT S+D +D +G V G + I+D
Sbjct: 258 IG-H--C----AEISSALFSWDCS--LILTGSMDKTCMLWDATSGKCVATLTGHDDEILD 308
Query: 422 ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD 481
+CF + I T S D R+++ T + + + +GH+ +I + + +++ GSSD
Sbjct: 309 SCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS--FNPQGNRLLTGSSD 366
Query: 482 GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
W V + Q ++ + + ++ I + N+ ++W
Sbjct: 367 KTARIWD-VQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 27/109 (24%), Positives = 56/109 (51%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
++ + F G T +D +++N + GH E++ + +++ +G+S
Sbjct: 306 ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSS 365
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
DK+ +W+V TGQ ++ H ++ FN ++VI+GS+DN+ +W
Sbjct: 366 DKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 135 (52.6 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 29/108 (26%), Positives = 53/108 (49%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D S LT DK LW+ + T GH E+ D+ IA+ ++D +
Sbjct: 269 FSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
++ TT + + + H +++ + FN + +++GS D T +WDV++
Sbjct: 329 VYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Score = 128 (50.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 28/117 (23%), Positives = 56/117 (47%)
Query: 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 223
L+ ++ F G +T D + +W+ + T GH E++ A + D S I +
Sbjct: 219 LAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILT 278
Query: 224 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
G+ DK+ +LW+ T+G+ V H ++ F+ ++ + S D T +++ +R
Sbjct: 279 GSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTR 335
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 38/154 (24%), Positives = 65/154 (42%)
Query: 383 SVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECL 440
S S I+T S D + +D TG V +G I A F+ DC ILT S D+
Sbjct: 226 SFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTC 285
Query: 441 RLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 500
L+D +G+ + GH D ++ C D I S+DG + I+ L
Sbjct: 286 MLWDATSGKCVATLTGHD--DEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEG 343
Query: 501 SVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAE 533
G+ ++ + +P +++ + ++W +
Sbjct: 344 HEGE--ISKISFNPQGNRLLTGSSDKTARIWDVQ 375
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDL 92
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 35 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 94
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + +Q +E +
Sbjct: 95 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 154
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 155 SCVRFSPNSSNPIIVS 170
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 77 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 136
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 137 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 191
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 168 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 224
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G ++N+LC P R + +A G ++K+W E
Sbjct: 225 NEGKHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLE 265
Score = 107 (42.7 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 253
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 14 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 71
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D T+ +WD+
Sbjct: 72 VVISSDGQFALSGSWDGTLRLWDL 95
Score = 68 (29.0 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 60 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 119
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 120 NRQIVSGSRDKTIKLWN 136
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 167 (63.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + ++ GH+H V+D + D SGA D ++ LW+
Sbjct: 32 LSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + IQ E +
Sbjct: 92 LTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 142 (55.0 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 34/116 (29%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ L + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 133
Query: 235 VTTGQPVRRWRE--HASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G ++ H V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNH 188
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 27/102 (26%), Positives = 53/102 (51%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
++CG DK +K+WN N LKT + GH +N T + D S ASG D +LW++ G
Sbjct: 166 VSCGWDKMVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + + + + F+ + + + + + + +WD++ +
Sbjct: 225 KHLYTL-DSGDVINALCFSPNRYWLCAATGPS-IKIWDLEGK 264
Score = 107 (42.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 29/104 (27%), Positives = 52/104 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKMVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G V+N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTL--DSGD-VINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 106 (42.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 201 TYGGHAHEVND-ATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTCV 254
T GH+ V AT I S + DKS+I+W++T G P R + H+ V+ V
Sbjct: 10 TLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDV 69
Query: 255 KFNEDSSVVISGSQDNTVMMWDV 277
+ D +SG+ D T+ +WD+
Sbjct: 70 VISSDGQFALSGAWDGTLRLWDL 92
Score = 51 (23.0 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 381 ITSVHVSDHEILTAS--LDCRIRRYDIRTG-NLVTDYVGEPIVDACFTRDCQCILTCSTD 437
+ +V VS L AS D + +D+ G +L T G+ I CF+ + + L +T
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDVINALCFSPN-RYWLCAATG 253
Query: 438 ECLRLFDKATGELLEEYKGHK-SGDFRIEC--CLD---SKDSQ-IFCGSSDGKIYKWQL 489
++++D +++E + S + + E C S D Q +F G +D I WQ+
Sbjct: 254 PSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQV 312
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 168 (64.2 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 153 RPLTVNRELFVLSG---LMHT-RFPVDGSYCLTCGSDKKIKLWNPY---RN-LLLKTYGG 204
R ++ + +LSG ++T +F G+ + D++I LW + +N ++LK G
Sbjct: 38 RTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLK---G 94
Query: 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVV 263
H + + D D SQI S + DK+V W+V TG+ +++ EH+S V +C ++
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI 154
Query: 264 ISGSQDNTVMMWDVKSR 280
ISGS D T +WD++ R
Sbjct: 155 ISGSDDGTAKLWDMRQR 171
Score = 146 (56.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 39/143 (27%), Positives = 71/143 (49%)
Query: 145 KEWSIRVYRP-LTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWN--PY--RNLLL 199
K W +R +T+ ++G+ + P DGSY LT G D K+ +W+ PY +N +
Sbjct: 205 KVWDLRKGEATMTLEGHQDTITGMSLS--P-DGSYLLTNGMDNKLCVWDMRPYAPQNRCV 261
Query: 200 KTYGGHAHEVNDATAAC----DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVT-CV 254
K + GH H C D +++ +G+SD+ V +W+ T+ + + + H V CV
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECV 321
Query: 255 KFNEDSSVVISGSQDNTVMMWDV 277
F+ ++ S S D + + ++
Sbjct: 322 -FHPTEPIIGSCSSDKNIYLGEI 343
Score = 105 (42.0 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 38/163 (23%), Positives = 69/163 (42%)
Query: 381 ITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCST 436
IT+V SD +I T +D ++ +D+R G G + I + D +LT
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 437 DECLRLFDKAT----GELLEEYKGHKSGDFR--IECCLDSKDSQIFCGSSDGKIYKWQLV 490
D L ++D ++ ++GH+ + ++C +++ GSSD ++ W
Sbjct: 243 DNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTT 302
Query: 491 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
I L G VN HPT I+ +C ++ ++ E
Sbjct: 303 SRRTIYKLPGHTGS--VNECVFHPTEP-IIGSCSSDKNIYLGE 342
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 240 (89.5 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 95/374 (25%), Positives = 155/374 (41%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D + D +K+W+ + L T GH V + DS +AS + D +V
Sbjct: 271 FSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVK 330
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291
+W+ TG R + H V V F+ DS ++ SGS D TV +W+ + L
Sbjct: 331 IWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG--------LLR 382
Query: 292 EALKEARDSITSVHSLVKSTK-NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLL 350
++ DS+ +V S + S+G K ++ R L +L G +
Sbjct: 383 HTFEDHEDSVMAVSFAHDSRRLASASDGGNVK-IWDTRTGSLQNVLEGHDDCVNSVSFSP 441
Query: 351 DFLGSTQIGDVTPISI-H---NSCFQALKEARDSITSVHVSDHE---ILTASLDCRIRRY 403
D D + I H S + L+ D + SV V H+ I +AS D ++ +
Sbjct: 442 DSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSV-VFSHDSRLIASASDDMTVKIW 500
Query: 404 DIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
D T L + + F+ D + + + S D ++++D ATG L +GH D
Sbjct: 501 DTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGH---D 557
Query: 462 FRIECCLDSKDSQIFCGSSD-GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 520
R+ S DS++ +SD G + W + T S G+ ++ SH T +
Sbjct: 558 DRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGS-GRVAISLAFSH-TSNLLA 615
Query: 521 SACGNN-VKLWTAE 533
SA + VK+W E
Sbjct: 616 SAMDDGTVKIWDME 629
Score = 194 (73.4 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 90/346 (26%), Positives = 145/346 (41%)
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS 261
+ GH V + + DS +AS + D +V +W+ T H V V F+ DS
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSR 318
Query: 262 VVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSV---HS--LVKSTKNHLS 316
++ S S D TV +WD + + L LK DS+ SV H L+ S N +
Sbjct: 319 LLASASDDGTVKIWDTATGT--------LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRT 370
Query: 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQH----LMVLLDFLGSTQIGDVTPISIHNSCFQ 372
+ R + + S + +S H L D G+ +I D S+ N
Sbjct: 371 VRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDG-GNVKIWDTRTGSLQN---- 425
Query: 373 ALKEARDSITSVHVS-DHEILTASLDCR-IRRYDIRTGNLVTDYVGEP--IVDACFTRDC 428
L+ D + SV S D +L ++ D R ++ + TG+L G + F+ D
Sbjct: 426 VLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDS 485
Query: 429 QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-W 487
+ I + S D ++++D AT L + H D + + S DS++ +SD K W
Sbjct: 486 RLIASASDDMTVKIWDTATVPLQNNLESH---DNWVRSVVFSHDSRLLASASDDMTVKIW 542
Query: 488 QLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTA 532
S +TL + VNS+ P + + SA + VK+W A
Sbjct: 543 DTATGSLENTLEGHDDR--VNSVSFSPDSRLLASASDDGTVKIWYA 586
Score = 146 (56.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 137 TRILYELPKEWSIRVYRPLT-VNRELFV--LSGLMHTRFPVDGSYCLTCGSDKKIKLWNP 193
+R++ + ++R++ T + R F +M F D + +K+W+
Sbjct: 359 SRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDT 418
Query: 194 YRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTC 253
L GH VN + + DS +AS + D++V +W TG R H V
Sbjct: 419 RTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRS 478
Query: 254 VKFNEDSSVVISGSQDNTVMMWD 276
V F+ DS ++ S S D TV +WD
Sbjct: 479 VVFSHDSRLIASASDDMTVKIWD 501
Score = 132 (51.5 bits), Expect = 0.00014, P = 0.00014
Identities = 66/297 (22%), Positives = 129/297 (43%)
Query: 243 RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKE---ARD 299
+++ H V V F+ DS ++ S S D TV +WD + S + NE +K + D
Sbjct: 258 QFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTAT-SFLQNTLEGHNEWVKSVVFSHD 316
Query: 300 SITSVHSLVKSTKN--HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST- 356
S + T + G L +++ K N + V+ S ++ T
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQRML-----KGHNDSVRSVVFSHDSRLIASGSNDRTV 371
Query: 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG 416
+I + T + ++ F+ +++ +++ H S + +AS ++ +D RTG+L G
Sbjct: 372 RIWETTTGLLRHT-FEDHEDSVMAVSFAHDS-RRLASASDGGNVKIWDTRTGSLQNVLEG 429
Query: 417 EP--IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
+ F+ D + + + S D ++++ ATG L +GH D+ + + S DS+
Sbjct: 430 HDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHN--DW-VRSVVFSHDSR 486
Query: 475 IFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+ +SD K W + + + S V + + SH +R ++ VK+W
Sbjct: 487 LIASASDDMTVKIWDTA-TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW 542
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 159 (61.0 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 173 PVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-------GHAHEVNDATAACDSSQIASGA 225
P D ++ DK + +W R+ YG GH+H ++D + D + SG+
Sbjct: 25 PKDPDTIISASRDKTLIVWKLTRDEDTN-YGYPQKRLYGHSHFISDVVLSSDGNYALSGS 83
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 285
D+++ LW++ G+ RR+ H V V F+ D+ ++SGS+D T+ +W+ + I
Sbjct: 84 WDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTI 143
Query: 286 Q 286
Q
Sbjct: 144 Q 144
Score = 111 (44.1 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC--GSSDGKIYKWQ 488
I++C D +++++ A +L + GH + S D + C G D K W
Sbjct: 166 IVSCGWDRTVKVWNLANCKLKNNHHGHNG---YLNTVTVSPDGSL-CTSGGKDSKALLWD 221
Query: 489 LVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
L D + TL H+ ++N+LC P R + A G ++K+W
Sbjct: 222 LNDGKNLYTLEHN---DIINALCFSPNRYWLCVAYGPSIKIW 260
Score = 56 (24.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 381 ITSVHVS-DHEILTAS-LDCRIRRYDIRTG-NLVTDYVGEPIVDACFTRDCQCILTCSTD 437
+ +V VS D + T+ D + +D+ G NL T + I CF+ + + L +
Sbjct: 196 LNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPN-RYWLCVAYG 254
Query: 438 ECLRLFDKATGELLEEYKGHK-SGDFRIEC--CLD---SKDSQ-IFCGSSDGKIYKWQL 489
++++D A + +EE + S + + CL S D Q +F G SD I WQ+
Sbjct: 255 PSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 163 (62.4 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 180 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + IQ E +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWV 151
Query: 295 KEARDSITSVHSLVKS 310
R S S + ++ S
Sbjct: 152 SCVRFSPNSSNPIIVS 167
Score = 137 (53.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 33/116 (28%), Positives = 61/116 (52%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 133
Query: 235 VTTGQPVRRWRE--HASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G ++ H V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNH 188
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 27/102 (26%), Positives = 53/102 (51%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
++CG DK +K+WN N LKT + GH +N T + D S ASG D +LW++ G
Sbjct: 166 VSCGWDKMVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + + + + F+ + + + + + + +WD++ +
Sbjct: 225 KHLYTL-DGGDTINALCFSPNRYWLCAATGPS-IKIWDLEGK 264
Score = 109 (43.4 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 201 TYGGHAHEVND-ATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTCV 254
T GH+ V AT I S + DK++I+W++T G P R R H+ V+ V
Sbjct: 10 TLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 255 KFNEDSSVVISGSQDNTVMMWDV 277
+ D +SGS D T+ +WD+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDL 92
Score = 106 (42.4 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 165 IVSCGWDKMVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + TL G +N+LC P R + +A G ++K+W E
Sbjct: 222 NEGKHLYTLD---GGDTINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 68 (29.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 372 QALKEARDSITSVHVS-DHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRD 427
+AL+ ++ V +S D + L+ S D +R +D+ TG +VG + ++ F+ D
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSAD 116
Query: 428 CQCILTCSTDECLRLFD 444
+ I++ S D+ ++L++
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
Score = 47 (21.6 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 381 ITSVHVSDHEILTAS--LDCRIRRYDIRTG-NLVTDYVGEPIVDACFTRDCQCILTCSTD 437
+ +V VS L AS D + +D+ G +L T G+ I CF+ + + L +T
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDTINALCFSPN-RYWLCAATG 253
Query: 438 ECLRLFDKATGELLEEYK------GHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQL 489
++++D +++E + K+ + S D Q +F G +D I WQ+
Sbjct: 254 PSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQV 312
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 217 (81.4 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 48/157 (30%), Positives = 87/157 (55%)
Query: 154 PLTVNREL-FVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE 208
P+ N L F L+G + +F +G + + +DK IK+W Y KT GH
Sbjct: 4 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 63
Query: 209 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ 268
++D + DS+ + S + DK++ +W+V++G+ ++ + H++ V C FN S++++SGS
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 123
Query: 269 DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305
D +V +WDVK+ +CL + L D +++VH
Sbjct: 124 DESVRIWDVKTG-------KCL-KTLPAHSDPVSAVH 152
Score = 177 (67.4 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ + D + ++ DK +K+W+ LKT GH++ V S+ I SG+
Sbjct: 63 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 122
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD S
Sbjct: 123 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 75/303 (24%), Positives = 132/303 (43%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDS 300
H V+ VKF+ + + S S D + +W K+ S H + + + A +
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSDSNL 75
Query: 301 ITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359
+ S S K+ K +S+G K + + N + +L+V F S +I
Sbjct: 76 LVSA-SDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 360 DVTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYVGE 417
DV C + L D +++VH + D I+++S D R +D +G + + +
Sbjct: 131 DVKT----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 186
Query: 418 ---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I +
Sbjct: 187 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 246
Query: 475 -IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLW 530
I GS D +Y W L + +I + V+++ C HPT I SA N +KLW
Sbjct: 247 WIVSGSEDNLVYIWNL-QTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDKTIKLW 304
Query: 531 TAE 533
++
Sbjct: 305 KSD 307
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
+F +G Y L D +KLW+ + LKTY GH +E + + I SG+ D
Sbjct: 195 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 254
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMW 275
V +W + T + V++ + H V + +++ S + +N T+ +W
Sbjct: 255 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 116 (45.9 bits), Expect = 0.00065, P = 0.00065
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ LKT H+ V+ D S I S + D +W+
Sbjct: 115 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 174
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
+GQ ++ + + V+ VKF+ + +++ + DNT+ +WD
Sbjct: 175 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 216
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 166 (63.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 45/142 (31%), Positives = 68/142 (47%)
Query: 160 ELFVLSGLM--HTRF------PVDGS-YCLTCGSDKKIKLWNPYRNLLLKTYG------- 203
E VL G+M HT P+D S +T DK I LW ++ K+YG
Sbjct: 3 EGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDD--KSYGVAQRRLT 60
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GH+H V D + D SG+ D + LW++ TG+ RR+ H V V F+ D+ +
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 264 ISGSQDNTVMMWDVKSRSHHPI 285
+S S+D T+ +W+ + I
Sbjct: 121 VSASRDRTIKLWNTLGECKYTI 142
Score = 136 (52.9 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 30/110 (27%), Positives = 59/110 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D +++LW+ + + GH +V + D+ QI S + D+++ LW
Sbjct: 74 DGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 235 VTTGQ---PVRRWREHASKVTCVKFNEDSSV--VISGSQDNTVMMWDVKS 279
T G+ + H V+CV+F+ ++ V ++S S D TV +W++++
Sbjct: 134 -TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 30/112 (26%), Positives = 59/112 (52%)
Query: 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244
DK +K+WN L + GH+ +N + D S ASG D ++LW++ G+ +
Sbjct: 172 DKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL 231
Query: 245 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-HPIQVRCLNEALK 295
E S + + F+ + + + ++ N++ +WD++S+S ++V +EA K
Sbjct: 232 -EAGSIIHSLCFSPNRYWLCAATE-NSIRIWDLESKSVVEDLKVDLKSEAEK 281
Score = 99 (39.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 26/103 (25%), Positives = 51/103 (49%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
I++ S D+ +++++ +L GH SG + + S G DG I W L
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGH-SG-YLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 491 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ ++ +L G ++++SLC P R + +A N++++W E
Sbjct: 224 EGKKLYSL--EAG-SIIHSLCFSPNRYWLCAATENSIRIWDLE 263
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 219 (82.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F +G + + +DK IK+W Y KT GH ++D + DS + SG+ DK++
Sbjct: 79 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTL 138
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+WE++TG+ ++ + H++ V C FN S++++SGS D +V +WDV++ +CL
Sbjct: 139 KVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-------KCL 191
Query: 291 NEALKEARDSITSVH 305
+ L D +++VH
Sbjct: 192 -KTLPAHSDPVSAVH 205
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 177 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S L GSD K +K+W LKT GH++ V S+ I SG+ D+SV +W+V
Sbjct: 126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
TG+ ++ H+ V+ V FN D S+++S S D +WD S
Sbjct: 186 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 229
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 74/303 (24%), Positives = 131/303 (43%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDS 300
H V+ VKF+ + + S S D + +W K+ S H + + + + ++R
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLL 129
Query: 301 ITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359
++ K+ K LS G K + + N + +L+V F S +I
Sbjct: 130 VSGSDD--KTLKVWELSTGKSLKTLKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
Query: 360 DVTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYVGE 417
DV C + L D +++VH + D I+++S D R +D +G + + +
Sbjct: 184 DVRT----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 239
Query: 418 ---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I +
Sbjct: 240 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 299
Query: 475 -IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLW 530
I GS D +Y W L S ++ + V+ + C HPT I SA N +KLW
Sbjct: 300 WIVSGSEDNMVYIWNL-QSKEVVQKLQGHTDTVLCTAC-HPTENIIASAALENDKTIKLW 357
Query: 531 TAE 533
++
Sbjct: 358 KSD 360
Score = 136 (52.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
+F +G Y L D +KLW+ + LKTY GH +E + + I SG+ D
Sbjct: 248 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 307
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMW 275
V +W + + + V++ + H V C + +++ S + +N T+ +W
Sbjct: 308 NMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 35/145 (24%), Positives = 71/145 (48%)
Query: 137 TRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVD---GSYCLTCGS-DKKIKLWN 192
+R+L + +++V+ L+ + L L G + F + S + GS D+ +++W+
Sbjct: 126 SRLLVSGSDDKTLKVWE-LSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 193 PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK-V 251
LKT H+ V+ D S I S + D +W+ +GQ ++ + + V
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 244
Query: 252 TCVKFNEDSSVVISGSQDNTVMMWD 276
+ VKF+ + +++ + DNT+ +WD
Sbjct: 245 SFVKFSPNGKYILAATLDNTLKLWD 269
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 217 (81.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 48/157 (30%), Positives = 87/157 (55%)
Query: 154 PLTVNREL-FVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE 208
P+ N L F L+G + +F +G + + +DK IK+W Y KT GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 209 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ 268
++D + DS+ + S + DK++ +W+V++G+ ++ + H++ V C FN S++++SGS
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 269 DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305
D +V +WDVK+ +CL + L D +++VH
Sbjct: 150 DESVRIWDVKTG-------KCL-KTLPAHSDPVSAVH 178
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ + D + ++ DK +K+W+ LKT GH++ V S+ I SG+
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD S
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 171 (65.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 75/303 (24%), Positives = 132/303 (43%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDS 300
H V+ VKF+ + + S S D + +W K+ S H + + + A +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSDSNL 101
Query: 301 ITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359
+ S S K+ K +S+G K + + N + +L+V F S +I
Sbjct: 102 LVSA-SDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 360 DVTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYVGE 417
DV C + L D +++VH + D I+++S D R +D +G + + +
Sbjct: 157 DVKT----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 418 ---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 475 -IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLW 530
I GS D +Y W L + +I + V+++ C HPT I SA N +KLW
Sbjct: 273 WIVSGSEDNLVYIWNL-QTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDKTIKLW 330
Query: 531 TAE 533
++
Sbjct: 331 KSD 333
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
+F +G Y L D +KLW+ + LKTY GH +E + + I SG+ D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMW 275
V +W + T + V++ + H V + +++ S + +N T+ +W
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ LKT H+ V+ D S I S + D +W+
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
+GQ ++ + + V+ VKF+ + +++ + DNT+ +WD
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 217 (81.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 48/157 (30%), Positives = 87/157 (55%)
Query: 154 PLTVNREL-FVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE 208
P+ N L F L+G + +F +G + + +DK IK+W Y KT GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 209 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ 268
++D + DS+ + S + DK++ +W+V++G+ ++ + H++ V C FN S++++SGS
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 269 DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305
D +V +WDVK+ +CL + L D +++VH
Sbjct: 150 DESVRIWDVKTG-------KCL-KTLPAHSDPVSAVH 178
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ + D + ++ DK +K+W+ LKT GH++ V S+ I SG+
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD S
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 171 (65.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 75/303 (24%), Positives = 132/303 (43%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDS 300
H V+ VKF+ + + S S D + +W K+ S H + + + A +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSDSNL 101
Query: 301 ITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359
+ S S K+ K +S+G K + + N + +L+V F S +I
Sbjct: 102 LVSA-SDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 360 DVTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYVGE 417
DV C + L D +++VH + D I+++S D R +D +G + + +
Sbjct: 157 DVKT----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 418 ---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 475 -IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLW 530
I GS D +Y W L + +I + V+++ C HPT I SA N +KLW
Sbjct: 273 WIVSGSEDNLVYIWNL-QTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDKTIKLW 330
Query: 531 TAE 533
++
Sbjct: 331 KSD 333
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
+F +G Y L D +KLW+ + LKTY GH +E + + I SG+ D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMW 275
V +W + T + V++ + H V + +++ S + +N T+ +W
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ LKT H+ V+ D S I S + D +W+
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
+GQ ++ + + V+ VKF+ + +++ + DNT+ +WD
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 217 (81.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 48/157 (30%), Positives = 87/157 (55%)
Query: 154 PLTVNREL-FVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE 208
P+ N L F L+G + +F +G + + +DK IK+W Y KT GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 209 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ 268
++D + DS+ + S + DK++ +W+V++G+ ++ + H++ V C FN S++++SGS
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 269 DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305
D +V +WDVK+ +CL + L D +++VH
Sbjct: 150 DESVRIWDVKTG-------KCL-KTLPAHSDPVSAVH 178
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ + D + ++ DK +K+W+ LKT GH++ V S+ I SG+
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD S
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 171 (65.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 75/303 (24%), Positives = 132/303 (43%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDS 300
H V+ VKF+ + + S S D + +W K+ S H + + + A +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSDSNL 101
Query: 301 ITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359
+ S S K+ K +S+G K + + N + +L+V F S +I
Sbjct: 102 LVSA-SDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 360 DVTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYVGE 417
DV C + L D +++VH + D I+++S D R +D +G + + +
Sbjct: 157 DVKT----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 418 ---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 475 -IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLW 530
I GS D +Y W L + +I + V+++ C HPT I SA N +KLW
Sbjct: 273 WIVSGSEDNLVYIWNL-QTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDKTIKLW 330
Query: 531 TAE 533
++
Sbjct: 331 KSD 333
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
+F +G Y L D +KLW+ + LKTY GH +E + + I SG+ D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMW 275
V +W + T + V++ + H V + +++ S + +N T+ +W
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ LKT H+ V+ D S I S + D +W+
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
+GQ ++ + + V+ VKF+ + +++ + DNT+ +WD
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 217 (81.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 48/157 (30%), Positives = 87/157 (55%)
Query: 154 PLTVNREL-FVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE 208
P+ N L F L+G + +F +G + + +DK IK+W Y KT GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 209 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ 268
++D + DS+ + S + DK++ +W+V++G+ ++ + H++ V C FN S++++SGS
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 269 DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305
D +V +WDVK+ +CL + L D +++VH
Sbjct: 150 DESVRIWDVKTG-------KCL-KTLPAHSDPVSAVH 178
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ + D + ++ DK +K+W+ LKT GH++ V S+ I SG+
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD S
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 171 (65.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 75/303 (24%), Positives = 132/303 (43%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDS 300
H V+ VKF+ + + S S D + +W K+ S H + + + A +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSDSNL 101
Query: 301 ITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359
+ S S K+ K +S+G K + + N + +L+V F S +I
Sbjct: 102 LVSA-SDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 360 DVTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYVGE 417
DV C + L D +++VH + D I+++S D R +D +G + + +
Sbjct: 157 DVKT----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 418 ---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 475 -IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLW 530
I GS D +Y W L + +I + V+++ C HPT I SA N +KLW
Sbjct: 273 WIVSGSEDNLVYIWNL-QTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDKTIKLW 330
Query: 531 TAE 533
++
Sbjct: 331 KSD 333
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
+F +G Y L D +KLW+ + LKTY GH +E + + I SG+ D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMW 275
V +W + T + V++ + H V + +++ S + +N T+ +W
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ LKT H+ V+ D S I S + D +W+
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
+GQ ++ + + V+ VKF+ + +++ + DNT+ +WD
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 217 (81.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 48/157 (30%), Positives = 87/157 (55%)
Query: 154 PLTVNREL-FVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE 208
P+ N L F L+G + +F +G + + +DK IK+W Y KT GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 209 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ 268
++D + DS+ + S + DK++ +W+V++G+ ++ + H++ V C FN S++++SGS
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 269 DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305
D +V +WDVK+ +CL + L D +++VH
Sbjct: 150 DESVRIWDVKTG-------KCL-KTLPAHSDPVSAVH 178
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ + D + ++ DK +K+W+ LKT GH++ V S+ I SG+
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD S
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 171 (65.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 75/303 (24%), Positives = 132/303 (43%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDS 300
H V+ VKF+ + + S S D + +W K+ S H + + + A +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSDSNL 101
Query: 301 ITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359
+ S S K+ K +S+G K + + N + +L+V F S +I
Sbjct: 102 LVSA-SDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 360 DVTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYVGE 417
DV C + L D +++VH + D I+++S D R +D +G + + +
Sbjct: 157 DVKT----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 418 ---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 475 -IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLW 530
I GS D +Y W L + +I + V+++ C HPT I SA N +KLW
Sbjct: 273 WIVSGSEDNLVYIWNL-QTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDKTIKLW 330
Query: 531 TAE 533
++
Sbjct: 331 KSD 333
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
+F +G Y L D +KLW+ + LKTY GH +E + + I SG+ D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMW 275
V +W + T + V++ + H V + +++ S + +N T+ +W
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ LKT H+ V+ D S I S + D +W+
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
+GQ ++ + + V+ VKF+ + +++ + DNT+ +WD
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 217 (81.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 48/157 (30%), Positives = 87/157 (55%)
Query: 154 PLTVNREL-FVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE 208
P+ N L F L+G + +F +G + + +DK IK+W Y KT GH
Sbjct: 30 PVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 209 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ 268
++D + DS+ + S + DK++ +W+V++G+ ++ + H++ V C FN S++++SGS
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 269 DNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVH 305
D +V +WDVK+ +CL + L D +++VH
Sbjct: 150 DESVRIWDVKTG-------KCL-KTLPAHSDPVSAVH 178
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ + D + ++ DK +K+W+ LKT GH++ V S+ I SG+
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD S
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 161 (61.7 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 73/303 (24%), Positives = 131/303 (43%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDS 300
H V+ VKF+ + + S S D + +W K+ S H + + + A +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSDSNL 101
Query: 301 ITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG 359
+ S S K+ K +S+G K + + N + +L+V F S +I
Sbjct: 102 LVSA-SDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 360 DVTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYVGE 417
DV C + L D +++VH + D I+++S D R +D +G + + +
Sbjct: 157 DVKT----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 418 ---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
P+ F+ + + IL + D L+L+D + G+ L+ Y HK+ + I +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGK 272
Query: 475 -IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLW 530
I GS D +Y W L + ++ + V+++ C HPT I SA N +KLW
Sbjct: 273 WIVSGSEDNLVYIWNL-QTKEVVQKLQGHTDVVISTAC-HPTENIIASAALENDKTIKLW 330
Query: 531 TAE 533
++
Sbjct: 331 KSD 333
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
+F +G Y L D +KLW+ + LKTY H +E + + I SG+ D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMW 275
V +W + T + V++ + H V + +++ S + +N T+ +W
Sbjct: 281 NLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ LKT H+ V+ D S I S + D +W+
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
+GQ ++ + + V+ VKF+ + +++ + DNT+ +WD
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
>TAIR|locus:2155528 [details] [associations]
symbol:AT5G67220 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006808
"regulation of nitrogen utilization" evidence=ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:CP002688 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AB020742
HOGENOM:HOG000203649 KO:K05542 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 UniGene:At.66656 UniGene:At.9615 EMBL:AY049299
EMBL:AY102157 IPI:IPI00528780 RefSeq:NP_201523.1
ProteinModelPortal:Q9FH91 SMR:Q9FH91 STRING:Q9FH91 PRIDE:Q9FH91
EnsemblPlants:AT5G67220.1 GeneID:836857 KEGG:ath:AT5G67220
TAIR:At5g67220 InParanoid:Q9FH91 OMA:VERAWAH PhylomeDB:Q9FH91
ProtClustDB:CLSN2686916 Genevestigator:Q9FH91 Uniprot:Q9FH91
Length = 423
Score = 219 (82.2 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 48/126 (38%), Positives = 72/126 (57%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFV 86
S+L FR L + + +TPM+ + F ++ K RN EF+T ED PL VQF +N+ D +
Sbjct: 99 SELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQEFTTCKEDRPLFVQFCANDPDTLL 158
Query: 87 RATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRILYELPKE 146
A + V P+C+ VD+N GCPQR A + YG L+ PL+ SL + + L +P
Sbjct: 159 EAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNL---PLVKSLVEKLAQNL-NVPVS 214
Query: 147 WSIRVY 152
IR++
Sbjct: 215 CKIRIF 220
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 162 (62.1 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 39/121 (32%), Positives = 59/121 (48%)
Query: 173 PVDGS-YCLTCGSDKKIKLWNPYRNLLLKTYG-------GHAHEVNDATAACDSSQIASG 224
PVD S +T DK I LW + K+YG GH+H V D + D SG
Sbjct: 24 PVDNSDVIVTSSRDKSIILWKLTKED--KSYGVAQRRMTGHSHFVQDVVLSSDGQFALSG 81
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP 284
+ D + LW++ TG+ RR+ H V V F+ D+ ++S S+D T+ +W+ +
Sbjct: 82 SWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYT 141
Query: 285 I 285
I
Sbjct: 142 I 142
Score = 135 (52.6 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 39/147 (26%), Positives = 74/147 (50%)
Query: 139 ILYELPKE-WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL 197
IL++L KE S V + FV ++ + DG + L+ D +++LW+
Sbjct: 41 ILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS----DGQFALSGSWDGELRLWDLATGE 96
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ---PVRRWREHASKVTCV 254
+ + GH +V + D+ QI S + D+++ LW T G+ + H V+CV
Sbjct: 97 STRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEADGHKEWVSCV 155
Query: 255 KFNEDSSV--VISGSQDNTVMMWDVKS 279
+F+ ++ V ++S S D TV +W++++
Sbjct: 156 RFSPNTLVPTIVSASWDKTVKVWNLQN 182
Score = 125 (49.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 34/126 (26%), Positives = 63/126 (50%)
Query: 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244
DK +K+WN L T GH+ +N + D S ASG D ++LW++ G+ +
Sbjct: 172 DKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL 231
Query: 245 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-HPIQVRCLNEALKEARDSITS 303
E S + + F+ + + + ++ N++ +WD++S+S ++V EA E D T
Sbjct: 232 -EAGSIIHSLCFSPNRYWLCAATE-NSIRIWDLESKSVVEDLKVDLKAEA--EKTDGSTG 287
Query: 304 VHSLVK 309
+ + K
Sbjct: 288 IGNKTK 293
Score = 102 (41.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 29/88 (32%), Positives = 42/88 (47%)
Query: 197 LLLK-TYGGHAHEVNDATAACDSSQ-IASGASDKSVILWEVTT-----GQPVRRWREHAS 249
L+LK T H V D+S I + + DKS+ILW++T G RR H+
Sbjct: 5 LVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSH 64
Query: 250 KVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V V + D +SGS D + +WD+
Sbjct: 65 FVQDVVLSSDGQFALSGSWDGELRLWDL 92
Score = 99 (39.9 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 26/103 (25%), Positives = 51/103 (49%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
I++ S D+ +++++ +L GH SG + + S G DG I W L
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGH-SG-YLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 491 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ ++ +L G ++++SLC P R + +A N++++W E
Sbjct: 224 EGKKLYSL--EAG-SIIHSLCFSPNRYWLCAATENSIRIWDLE 263
Score = 86 (35.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 38/155 (24%), Positives = 66/155 (42%)
Query: 387 SDHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLF 443
SD + L+ S D +R +D+ TG +VG + ++ F+ D + I++ S D ++L+
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 444 DKATGEL---LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 500
+ GE + E GHK + ++ I S D + W L + +TL
Sbjct: 133 N-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAG 191
Query: 501 SVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAEE 534
G +N++ P S + V LW E
Sbjct: 192 HSG--YLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
>DICTYBASE|DDB_G0278803 [details] [associations]
symbol:dus1l "tRNA-dihydrouridine synthase 1-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
dictyBase:DDB_G0278803 GO:GO:0005634 Gene3D:3.20.20.70
GenomeReviews:CM000152_GR GO:GO:0050660 EMBL:AAFI02000024
eggNOG:COG0042 KO:K05542 GO:GO:0017150 PANTHER:PTHR11082
RefSeq:XP_641974.1 ProteinModelPortal:Q54XQ6 STRING:Q54XQ6
EnsemblProtists:DDB0238071 GeneID:8621706 KEGG:ddi:DDB_G0278803
OMA:QIARRGN Uniprot:Q54XQ6
Length = 435
Score = 213 (80.0 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 41/94 (43%), Positives = 56/94 (59%)
Query: 29 LNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFVRA 88
L FR L R + D+ +TPM + +F R + +ST PED PLVVQF N + V+A
Sbjct: 65 LAFRMLCRKYGADMVYTPMFHSKNFATCKTYRRDYWSTCPEDRPLVVQFCGNEPEWVVKA 124
Query: 89 TQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSK 122
+Y+ HC+ +DLN GCPQ+ A + YG LL K
Sbjct: 125 AKYIEDHCDAIDLNLGCPQQIARRGNYGSFLLDK 158
Score = 47 (21.6 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 21/104 (20%), Positives = 42/104 (40%)
Query: 294 LKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKY-LNGLLSGVLMSTQHLMVLLDF 352
L+EA + ++H K K H S K + R + + + +G ++ + + L+
Sbjct: 197 LQEAGCQLLTIHGRTKEQKGHNSGIANWKAIRTIREQLSIPVIANGSVVQYEDIDRCLEE 256
Query: 353 LGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASL 396
G+ + I + S F LK + ++ EI S+
Sbjct: 257 TGADGVMSAEGILANPSFFSGLKVPIYQVAREYIDFTEIYKTSI 300
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 168 (64.2 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 45/142 (31%), Positives = 71/142 (50%)
Query: 142 ELPKEWSIRVYRPLTVNRELFVLSGLMHT-RFPVDGSYCLTCGSDKKIKLWNPYRNLL-L 199
ELPK S + P V L G ++T +F DGS+ + G D++I LWN +
Sbjct: 17 ELPKRTS-SLMAPTMV---LQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENF 72
Query: 200 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 259
GH + + DSS + S +DK+V +W++ TG +R ++ H V V N
Sbjct: 73 AVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRR 132
Query: 260 S-SVVISGSQDNTVMMWDVKSR 280
++ S S D TVM+ D++S+
Sbjct: 133 GPQMICSASDDGTVMVHDMRSK 154
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 39/154 (25%), Positives = 75/154 (48%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IASGA 225
+M +F D S+ ++ G+DK +++W+ ++ + H VN Q I S +
Sbjct: 82 IMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSAS 141
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 285
D +V++ ++ + + +++ + T V FN+ + VI G DN + +WD+
Sbjct: 142 DDGTVMVHDMRSKEAAKKFICKYQQ-TAVTFNDAADNVICGGIDNQIKVWDMLRND---- 196
Query: 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
VR + L RD+ITS+ S+ + LSN +
Sbjct: 197 -VRYV---LSGHRDTITSL-SVSHNGNFLLSNSM 225
Score = 116 (45.9 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH E+ + + D S +AS D+ + LW V + + H + VKFN DSS
Sbjct: 34 GHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSH 93
Query: 263 VISGSQDNTVMMWDVKSRS 281
++S D TV +WD+++ S
Sbjct: 94 LVSAGTDKTVRVWDMETGS 112
Score = 89 (36.4 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 39/173 (22%), Positives = 78/173 (45%)
Query: 375 KEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCIL 432
K + ++T +D+ ++ +D +I+ +D+ ++ G + I + + +L
Sbjct: 163 KYQQTAVTFNDAADN-VICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLL 221
Query: 433 TCSTDECLRLFD----KATGELLEEYKG--HKSGDFRIECCLDSKDSQIFCGSSDGKIYK 486
+ S D L +D L+ Y+G H ++C +D+ I GS+D +Y
Sbjct: 222 SNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVYV 281
Query: 487 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE---EDY 536
W + + L +G VN HPT++ ++SA G++ ++ E EDY
Sbjct: 282 WNAKSRACVYKLPGHLGS--VNCTALHPTQQILLSA-GSDKTIFLGELDLEDY 331
Score = 65 (27.9 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 366 IHNSCFQALKEARDSITSVHVSDHE--ILTASLDCRIRRYDIR 406
+ N L RD+ITS+ VS + +L+ S+DC + +DIR
Sbjct: 193 LRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIR 235
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 175 (66.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 38/116 (32%), Positives = 59/116 (50%)
Query: 165 SGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 223
SG ++ T F D Y L+ DK ++LW+ + L +Y GH H V D + + A+
Sbjct: 525 SGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFAT 584
Query: 224 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ D++ LW P+R + H + V CV F+ + V +GS D T MWDV +
Sbjct: 585 ASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVST 640
Score = 160 (61.4 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 30/114 (26%), Positives = 61/114 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F +G Y T SDK ++W+ ++ + GH V D +++G+ D +
Sbjct: 617 FHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIIN 676
Query: 232 LWEVTTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP 284
+W++ TG+ +++ R H + + ++++ +V+ISG D+TV +WD+K + P
Sbjct: 677 VWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEP 730
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/102 (27%), Positives = 54/102 (52%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G Y T D+ +LW+ L+ + GH ++V+ + + + +G+SDK+ +W+V
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+TG VR + H + V + D + +GS+D + +WD+
Sbjct: 639 STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDI 680
Score = 107 (42.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 383 SVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECL 440
S H + + T S D R +D+ TG+ V ++G P++ D + + T S D +
Sbjct: 616 SFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGII 675
Query: 441 RLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
++D TG+ L++ +GH G I SK+ + G +D + W L
Sbjct: 676 NVWDIGTGKRLKQMRGH--GKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
Score = 98 (39.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 200 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 259
KT GH+ V + + D+ + SG+ DK+V LW + T + ++ H V V F+
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 260 SSVVISGSQDNTVMMWDVKSRSH-HPIQV 287
+ S D T +W S H +P+++
Sbjct: 579 GHYFATASHDQTARLW---SCDHIYPLRI 604
Score = 95 (38.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
+ T S+D+ R++D +TG+ + + GH + I C D + + GS DG I W +
Sbjct: 624 VFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGR--WLSTGSEDGIINVWDIG 681
Query: 491 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLW 530
++ + GK + SL S+ +++ + G + V++W
Sbjct: 682 TGKRLKQM-RGHGKNAIYSL-SYSKEGNVLISGGADHTVRVW 721
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 170 (64.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 37/113 (32%), Positives = 61/113 (53%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
+F +GS + G D+ I LWN Y + T GH+ V + D S + S ++DK+
Sbjct: 74 KFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKT 133
Query: 230 VILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Score = 153 (58.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 43/157 (27%), Positives = 73/157 (46%)
Query: 165 SG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IA 222
SG +M + DGS + +DK + +W+ +K GH VN A Q +
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+G+ D +V LW++ V+ + ++ +V V FN+ S +ISG DN + +WD++
Sbjct: 170 TGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK- 227
Query: 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
L ++ DS+T + SL LSN +
Sbjct: 228 -------LTYTMRGHADSVTGL-SLSSEGSYLLSNAM 256
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 165 SGLMHTRFPVDGSYCLTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+ +++ +P L C GSD +KLW+ + ++T+ + ++V T S QI
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQII 210
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
SG D + +W++ + R HA VT + + + S ++S + DNTV +WDV+
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/143 (24%), Positives = 72/143 (50%)
Query: 145 KEWSIRVYR-PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWN--PY--RNLLL 199
K W +R + T+ ++GL + +GSY L+ D +++W+ P+ + +
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSS---EGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 200 KTYGGHAHEVNDATAAC----DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255
K + G+ H C D S+IA+G++D+ V +W+ T+ + + + HA + V
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVA 335
Query: 256 FNEDSSVVISGSQDNTVMMWDVK 278
F+ D +++S S D + M +++
Sbjct: 336 FHPDEPIILSASSDKRLYMGEIQ 358
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 32/106 (30%), Positives = 51/106 (48%)
Query: 183 GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR 242
G D IK+W+ +N L T GHA V + + + S + S A D +V +W+V P
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 243 RWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVKSR 280
R + H + ++ ++ D S + +GS D V +WD SR
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Score = 113 (44.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 535
GS DG + W + + + T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAVQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 94 (38.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 263 VISGSQDNTVMMWD 276
+ S S D TV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 88 (36.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 380 SITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTD 437
++T SD +I++ +D I+ +D+R L G + + + + +L+ + D
Sbjct: 199 AVTFNDTSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 438 ECLRLFDK---ATGE-LLEEYKG--HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
+R++D A E ++ ++G H + C S+I GS+D +Y W
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ L G +N + HP I+SA + +L+ E
Sbjct: 318 RRVLYKLPGHAGS--INEVAFHPDEPIILSASSDK-RLYMGE 356
Score = 65 (27.9 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
P+ H +V C KF+ + S + S D +++W+V
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 96
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 180 (68.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G Y +C D+ ++W+ R L+ GH +V+ + + IA+G+SDK+V
Sbjct: 467 QFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTV 526
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
LW+V TG+ VR + H S V + + D + SG +D T+MMWD+ +
Sbjct: 527 RLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 575
Score = 168 (64.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 165 SGLMHTR-FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 223
SG +++ F G + L+ +D I+LW+ N L Y GH + V DA + AS
Sbjct: 418 SGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFAS 477
Query: 224 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ D++ +W + QP+R H S V CV+++ + + + +GS D TV +WDV++
Sbjct: 478 CSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT 533
Score = 156 (60.0 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 49/182 (26%), Positives = 90/182 (49%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
WS+ +PL + LS + ++ + +Y T SDK ++LW+ ++ + GH
Sbjct: 487 WSMDRIQPLRIMAGH--LSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHR 544
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
V + D +ASG D ++++W+++T + + H S V + ++ + S++ SG
Sbjct: 545 SMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASG 604
Query: 267 SQDNTVMMWDVKSRSH-HPIQVRCLNE-ALKEARD---SITSVHSLVKSTKNHL-SNGLL 320
S D TV +WDV S + + + N L+ R T VH+L S +N L + G +
Sbjct: 605 SADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRFSRRNLLFAAGAI 664
Query: 321 TK 322
+K
Sbjct: 665 SK 666
Score = 100 (40.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 29/135 (21%), Positives = 63/135 (46%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRL 442
H + + I T S D +R +D++TG V ++G ++ + D + + + D + +
Sbjct: 511 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 570
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV 502
+D +T + GH S + + + S + GS+D + W + S++++
Sbjct: 571 WDLSTARCITPLMGHNSCVWSLS--YSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKN 628
Query: 503 GKAV-VNSLCSHPTR 516
G + + SL + PT+
Sbjct: 629 GNSNRLRSLRTFPTK 643
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 175 (66.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + + DK IK+WN YR L + H H V A + D I S + DK++
Sbjct: 110 FSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+W+ T Q V + + V FN + + + S D+TV +WD++
Sbjct: 170 IWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIR 216
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 36/146 (24%), Positives = 70/146 (47%)
Query: 138 RILYELPKEWSIRVYRPLTVNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLW 191
+ L ++ SI+V+ + R+ F+ S HT +F DG ++C DK IK+W
Sbjct: 115 QFLASASEDKSIKVWN---MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 192 NPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV 251
+ + + N + + IAS SD +V +W++ + ++ ++ H+ V
Sbjct: 172 DTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGV 231
Query: 252 TCVKFNEDSSVVISGSQDNTVMMWDV 277
CV F+ + +I+ S D T+ + D+
Sbjct: 232 NCVSFHPSGNYLITASSDGTLKILDL 257
Score = 141 (54.7 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+ + D+ I+LW P + + H V + D +AS + DKS+ +W +
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM 131
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + H V C KF+ D +++S S+D T+ +WD ++
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Score = 100 (40.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 22/92 (23%), Positives = 47/92 (51%)
Query: 192 NPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV 251
+P +L + + GH + + + Q+A+G+ D ++LW + R+ H +
Sbjct: 4 SPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVI 63
Query: 252 TCVKFNEDSSVVISGSQDNTVMMW--DVKSRS 281
T V+F+ +++ S S+D T+ +W D + +S
Sbjct: 64 TSVQFSPLGNLLASASRDRTIRLWIPDKRGKS 95
Score = 87 (35.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FTRDCQCILTCSTDECLRLFDKATG 448
I +A D ++ +DIR L+ Y V V+ F ++T S+D L++ D G
Sbjct: 201 IASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEG 260
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ 488
L+ +GH F + SK ++F G +D ++ W+
Sbjct: 261 RLIYTLQGHTGPVFTVSF---SKGGELFTSGGADAQVLLWR 298
Score = 84 (34.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 391 ILTASLDCRIRRYDIRTGNLV---TDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKAT 447
I++ S D I+ +D V +D+VG A F + CI + +D ++++D
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVA-FNPNGTCIASAGSDHTVKIWDIRV 217
Query: 448 GELLEEYKGHKSGDFRIECC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 498
+LL+ Y+ H G + C + + SSDG + L++ I TL
Sbjct: 218 NKLLQHYQVHSGG---VNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTL 266
Score = 67 (28.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 22/102 (21%), Positives = 46/102 (45%)
Query: 422 ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD 481
A F+ D + I++CS D+ ++++D + + + F + + I SD
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG--FANFVAFNPNGTCIASAGSD 207
Query: 482 GKIYKWQL-VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522
+ W + V+ +HS G VN + HP+ ++++A
Sbjct: 208 HTVKIWDIRVNKLLQHYQVHSGG---VNCVSFHPSGNYLITA 246
Score = 53 (23.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 383 SVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECL 440
S H S + ++TAS D ++ D+ G L+ G P+ F++ + + D +
Sbjct: 235 SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQV 294
Query: 441 RLFDKATGELLEEYK 455
L+ EL YK
Sbjct: 295 LLWRTNFDEL--NYK 307
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 158 (60.7 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 33/107 (30%), Positives = 57/107 (53%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GH+H V+D + D SG+ D ++ LW++TTG RR+ H V V F+ D+ +
Sbjct: 20 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI 79
Query: 264 ISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310
+SGS+D T+ +W+ + +Q +E + R S S + ++ S
Sbjct: 80 VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 126
Score = 139 (54.0 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 33 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 92
Query: 235 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHH 283
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 93 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 147
Score = 113 (44.8 bits), Expect = 0.00036, P = 0.00036
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
++CG DK +K+WN N LKT + GH +N T + D S ASG D +LW++ G
Sbjct: 125 VSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 183
Query: 239 Q 239
+
Sbjct: 184 K 184
Score = 58 (25.5 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++C D+ +++++ A +L + GH +G + S D + G DG+ W L
Sbjct: 124 IVSCGWDKLVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 180
Query: 490 VDSSQISTL 498
+ + TL
Sbjct: 181 NEGKHLYTL 189
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 175 (66.7 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 93 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 152
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 153 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 212
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 213 VVECISWAPESSYSSIS 229
Score = 131 (51.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 26 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 77
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 78 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 137
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 138 NGDHIVSASRDKTIKMWEVQT 158
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 78 (32.5 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 223 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 282
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 283 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 340
Query: 486 KWQ 488
W+
Sbjct: 341 VWE 343
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 178 (67.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S A DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 128 (50.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 39/141 (27%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S ++D T+ MW+V++
Sbjct: 203 NGDHIVSAARDKTIKMWEVQT 223
Score = 78 (32.5 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 211 (79.3 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 80/309 (25%), Positives = 128/309 (41%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L + + GH + + QIASG+ D SV++W + R+ H VTCV+F+
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFS 69
Query: 258 EDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317
+ ++ S S+D TV +W V S + R +++ S L S +
Sbjct: 70 PSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKL 128
Query: 318 GLL--TKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS-IHNSCFQAL 374
+ K++ R ++ N + LMV + + ++ D + IH C
Sbjct: 129 WSVHRQKIICTLR-EHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG- 186
Query: 375 KEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FTRDCQCIL 432
S H S I TAS D +R +DIRT L+ Y V V+A F +L
Sbjct: 187 --GYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLL 244
Query: 433 TCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGS-SDGKIYKWQL-V 490
T S+D L++ D G LL GH+ C S+ F + SD ++ W+
Sbjct: 245 TASSDSTLKILDLLEGRLLYTLHGHQGS---ASCVSFSRSGDQFASAGSDQQVMVWRTNF 301
Query: 491 DSSQISTLI 499
DS S ++
Sbjct: 302 DSVDYSRVL 310
Score = 165 (63.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 35/123 (28%), Positives = 64/123 (52%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG LT D+ IKLW+ +R ++ T H + V A + D + S + D++V
Sbjct: 110 FSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVK 169
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS---HHPIQVR 288
LW+ ++ Q + + E + V F+ S+ + + S DNTV +WD+++ + H+ +
Sbjct: 170 LWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSA 229
Query: 289 CLN 291
+N
Sbjct: 230 AVN 232
Score = 147 (56.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244
DK ++LW P + H V + D + + + D+S+ LW V + +
Sbjct: 81 DKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTL 140
Query: 245 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
REH + V C +F+ D +++S S D TV +WD SR
Sbjct: 141 REHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSR 176
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/137 (24%), Positives = 72/137 (52%)
Query: 145 KEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY-- 202
K WS+ + + RE + + RF DG ++ D+ +KLW+ L+ T+
Sbjct: 127 KLWSVHRQKIICTLREHN--NWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCE 184
Query: 203 -GGHAHEVN-DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS 260
GG++ V+ ++ C IA+ +SD +V +W++ T ++ ++ H++ V + F+
Sbjct: 185 PGGYSSYVDFHPSSTC----IATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSG 240
Query: 261 SVVISGSQDNTVMMWDV 277
+ +++ S D+T+ + D+
Sbjct: 241 NHLLTASSDSTLKILDL 257
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 167 (63.8 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 40/116 (34%), Positives = 62/116 (53%)
Query: 167 LMHTRFPVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD--SSQIAS 223
L + F GS C GS D+ K+W+ L T GH + V A A + ++A+
Sbjct: 95 LTNVAFNKSGS-CFITGSYDRTCKIWDTASGEELHTLEGHRNVVY-AIAFNNPYGDKVAT 152
Query: 224 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
G+ DK+ LW TG+ +R H +++ C+ FN S++V +GS D T +WDV+S
Sbjct: 153 GSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVES 208
Score = 164 (62.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 67/275 (24%), Positives = 117/275 (42%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G T DK KLW+ T+ GH E+ S+ +A+G+ D + LW+V
Sbjct: 147 GDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDV 206
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPIQV-RCLNEA 293
+G+ V H +++ + FN +++GS D+T ++WDV S R H + R
Sbjct: 207 ESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISC 266
Query: 294 LKEARD-SITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352
++ D S+ + SL KS K + G A + + +L T L+
Sbjct: 267 VQFNWDCSLIATASLDKSCKVWDAEG---GQCLATLLGHNDEVLDVCFNYTGQLIATASA 323
Query: 353 LGSTQIGDVTPISIHNSCFQALKEARDSITSV--HVSDHEILTASLDCRIRRYDIRTGNL 410
G++++ C L+ + I+ V + +LTAS+D R + ++TG
Sbjct: 324 DGTSRVFSTDTFQ----CLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGAC 379
Query: 411 VTDYVG--EPIVDACFTRDCQCILTCSTDECLRLF 443
+ G + I F + I+T S D R++
Sbjct: 380 LQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 146 (56.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 68/321 (21%), Positives = 132/321 (41%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239
L C +K+ + + L + H + + S +G+ D++ +W+ +G+
Sbjct: 66 LICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGE 125
Query: 240 PVRRWREHASKVTCVKFNED-SSVVISGSQDNTVMMWDVKSRS------HHPIQVRCLNE 292
+ H + V + FN V +GS D T +W ++ H ++ CL
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCL-- 183
Query: 293 ALKEARDSITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD 351
A + ++ + S+ + K + +G + + ++S +T +V
Sbjct: 184 AFNP-QSTLVATGSMDTTAKLWDVESGEEVSTLAG----HFAEIISLCFNTTGDRLVTGS 238
Query: 352 FLGSTQIGDV-TPISIHNSCFQALKEARDSITSVHVS-DHEIL-TASLDCRIRRYDIRTG 408
F + + DV + +H L R I+ V + D ++ TASLD + +D G
Sbjct: 239 FDHTAILWDVPSGRKVH-----VLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGG 293
Query: 409 NLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 466
+ +G + ++D CF Q I T S D R+F T + L + +GHK G+ +
Sbjct: 294 QCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHK-GEIS-KV 351
Query: 467 CLDSKDSQIFCGSSDGKIYKW 487
C +++ S++ S D W
Sbjct: 352 CFNAQGSRVLTASVDKTSRVW 372
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 159 RELFVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 214
R++ VLSG + +F D S T DK K+W+ L T GH EV D
Sbjct: 252 RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCF 311
Query: 215 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 274
IA+ ++D + ++ T Q + + H +++ V FN S V++ S D T +
Sbjct: 312 NYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRV 371
Query: 275 WDVKS 279
W VK+
Sbjct: 372 WCVKT 376
Score = 90 (36.7 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 32/122 (26%), Positives = 45/122 (36%)
Query: 370 CFQALKEARDSITSV--HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
C L D + V + + I TAS D R + T + G I CF
Sbjct: 295 CLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFN 354
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+LT S D+ R++ TG L+ +GH F C + + I GS D
Sbjct: 355 AQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIF--SCAFNYEGDTIITGSKDNTCR 412
Query: 486 KW 487
W
Sbjct: 413 IW 414
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 175 (66.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 78 (32.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 175 (66.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 78 (32.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 175 (66.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 78 (32.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 175 (66.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 78 (32.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 175 (66.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 78 (32.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 175 (66.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 78 (32.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 175 (66.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 78 (32.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 175 (66.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 78 (32.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 175 (66.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + SI+
Sbjct: 278 VVECISWAPESSYSSIS 294
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 78 (32.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + ++ EA S T +L+ S D I+ +D+ TG + VG + F
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 38/116 (32%), Positives = 63/116 (54%)
Query: 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 223
L + +F DG + + +DK IK+W Y +T GH ++D + DS I S
Sbjct: 46 LKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICS 105
Query: 224 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ DK++ +W+V +G+ V+ + H V V FN S++++SGS D V +WDV +
Sbjct: 106 ASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT 161
Score = 186 (70.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 38/111 (34%), Positives = 59/111 (53%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ + D + DK IK+W+ ++KT GH V + S+ I SG+
Sbjct: 90 GISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGS 149
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
D++V +W+V TG+ + H+ VT V FN D ++V+SGS D TV +WD
Sbjct: 150 FDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWD 200
Score = 151 (58.2 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 64/289 (22%), Positives = 129/289 (44%)
Query: 196 NLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
N +LK T GH ++ + D +AS ++DK++ +W G+ R H ++ +
Sbjct: 35 NYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDI 94
Query: 255 KFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEA--RDSITSVHSLVKS-- 310
+++DS ++ S S D T+ +WDV+S V+ L + KE S +L+ S
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVESGK----MVKTL-KGHKEYVFGVSFNPQSNLIVSGS 149
Query: 311 -TKN----HLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLL-DFLGSTQIGDVTPI 364
+N ++ G TK++ A + ++GV + +V+ + G+ +I D T
Sbjct: 150 FDENVRIWDVNTGECTKMISAH-----SDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTG 204
Query: 365 SIHNSCFQALKEARD-SITSVHVSDHEILTASLDCRIRRYDIRTGN-LVTDYVGEPIVDA 422
+ N+ + ++ ++ S + +L +LD +R + + Y G
Sbjct: 205 QLLNTI--STEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKY 262
Query: 423 C----FTRDC-QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 466
C F+ C + I+T S D + +++ T E+++ GH+ + C
Sbjct: 263 CIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVAC 311
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ K H+ V D + + SG+ D +V +W+
Sbjct: 142 SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDT 201
Query: 236 TTGQPVRRWR-EHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
TTGQ + E +V+ VKF+ + V++G+ DNT+ +W
Sbjct: 202 TTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW 242
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 160 (61.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 184 SDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRR 243
+D IKLW+ ++T GH H V+ + I S + DK++ +WEV TG V+
Sbjct: 2 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 61
Query: 244 WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPIQVRCLNEALKEA 297
+ H V V+ N+D +++ S S D TV +W V ++ H V C++ A + +
Sbjct: 62 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 121
Query: 298 RDSIT 302
SI+
Sbjct: 122 YSSIS 126
Score = 124 (48.7 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
+G + ++ DK IK+W +KT+ GH V D + IAS ++D++V +W
Sbjct: 35 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 94
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSS 261
V T + REH V C+ + +SS
Sbjct: 95 VATKECKAELREHEHVVECISWAPESS 121
Score = 49 (22.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
IL+C+ D+ LR++D ++ H+ F + GS D + W+
Sbjct: 151 ILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVKVWE 206
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 182 (69.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP G L+C D KIKLW Y ++T+ GH+ V D +Q S A D+ +
Sbjct: 296 FPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYI 355
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 279
LW+ TGQ + R+ KV CVKFN D +++++G D ++ WD++S
Sbjct: 356 KLWDSETGQCISRFTNR--KVPYCVKFNPDEDKQNLLVAGMSDKKIVQWDIRS 406
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/149 (21%), Positives = 71/149 (47%)
Query: 387 SDHEILTASLDCRIRRYDI-RTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLF 443
S H +L+ S+DC+I+ +++ V ++G + + D CF L+ + D ++L+
Sbjct: 299 SGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLW 358
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDS-KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV 502
D TG+ + + K + ++ D K + + G SD KI +W + + +
Sbjct: 359 DSETGQCISRFTNRKV-PYCVKFNPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHL 417
Query: 503 GKAVVNSLCS-HPTRKHIMSACGNNVKLW 530
G VN++ R+ + ++ ++++W
Sbjct: 418 G--AVNTITFVDENRRFVSTSDDKSLRVW 444
Score = 109 (43.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 47/232 (20%), Positives = 94/232 (40%)
Query: 55 KSSKARNNEFSTSPEDTPLVVQFASNNHD-DFVRATQYVAPHCNGVDL--NCGCPQR--- 108
+ + +N E S + E T L ++ A + ++ Q V + D+ C P++
Sbjct: 222 RQKRGKNEEESPAEEKTVLHIKDAYDYQGRSYLHIPQDVGINLRSADIPDKCYLPKKQLH 281
Query: 109 -WA-IKEGYGCALLSKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSG 166
W +G L + H LL S L+E+ E R R + +
Sbjct: 282 VWTGHTKGVSAIRLFPKSGH-LLLSCSMDCKIKLWEVYNER--RCVRTFIGHSK-----A 333
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDATAACDSSQIASG 224
+ F G+ L+ D+ IKLW+ + + + V + + +G
Sbjct: 334 VRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTNRKVPYCVKFNPDEDKQNLLVAG 393
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
SDK ++ W++ +G+ V+ + H V + F +++ +S S D ++ +W+
Sbjct: 394 MSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWE 445
Score = 72 (30.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 454 YKGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511
+KGH + C +D S D S + G +DGK+ W ++++ I + K +++L
Sbjct: 501 FKGHMVAGYA--CQVDFSPDMSYVVSGDADGKLNIWDW-KTTKLYHRIKAHDKVCISALW 557
Query: 512 S-HPTRKHIMSACGNNVKLW 530
H T K I +KLW
Sbjct: 558 HPHETSKVITCGWDGQIKLW 577
Score = 58 (25.5 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 27/102 (26%), Positives = 41/102 (40%)
Query: 388 DHEILTASLDCRIR--RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
D++IL R R + I G++V Y + VD F+ D +++ D L ++D
Sbjct: 481 DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ--VD--FSPDMSYVVSGDADGKLNIWDW 536
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
T +L K H I CG DG+I W
Sbjct: 537 KTTKLYHRIKAHDKVCISALWHPHETSKVITCGW-DGQIKLW 577
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 155 (59.6 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKS 229
+F G+ + GSDK+I LWN Y + GH + + + DS++I + +DKS
Sbjct: 69 KFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKS 128
Query: 230 VILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSR-SHHPIQ 286
+ +W+ G+ ++R REH+ V +C +V SGS D + ++D +S+ S H Q
Sbjct: 129 IGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ 187
Score = 135 (52.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 41/154 (26%), Positives = 74/154 (48%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IASGA 225
++ + D + T +DK I +W+ + L+K H+ VN A +ASG+
Sbjct: 108 ILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGS 167
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 285
D+S +++ T + +H VT V F++ S +I+G DN + +WD++++ P+
Sbjct: 168 DDRSARIFD-TRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQED-PL 225
Query: 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
L +D+ITS S+ K LSN +
Sbjct: 226 YT------LASHQDTITST-SVSKDGAYLLSNSM 252
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 175 DGSYCLTCGSDKKIKLWN--PYR--NLLLKTYGGHAH--EVN--DATAACDSSQIASGAS 226
DG+Y L+ D K+W+ PY N +KT+ G + E N ++ + D +I G+S
Sbjct: 243 DGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSS 302
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
D+ V +W+ T Q H+ V V F+ + ++ S S D T+ + ++K
Sbjct: 303 DRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEIK 354
Score = 93 (37.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 40/166 (24%), Positives = 76/166 (45%)
Query: 381 ITSVHVSD--HEILTASLDCRIRRYDIRTGN--LVT-DYVGEPIVDACFTRDCQCILTCS 435
+TSV SD +++T +D IR +DIR L T + I ++D +L+ S
Sbjct: 192 VTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNS 251
Query: 436 TDECLRLFD----KATGELLEEYKGHKSGDFR--IECCLDSKDSQIFCGSSDGKIYKWQL 489
D +++D ++ + G ++ + I+ +I CGSSD ++Y W
Sbjct: 252 MDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWD- 310
Query: 490 VDSSQISTLI--HSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
++ Q+ + HS VN + HP I+++C ++ ++ E
Sbjct: 311 TNTKQLQYCLPGHS---GTVNEVTFHPNEP-IIASCSSDKTIYLGE 352
Score = 92 (37.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 183 GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR 242
G+++ KL +P L+ GH E+ + +ASG SDK + LW V G+ +
Sbjct: 44 GTERTSKLEHPIMQLI-----GHKGEIYSCKFNSYGTALASGGSDKEIFLWNVY-GECIN 97
Query: 243 R--WREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
+ H + + ++ DS+ + + D ++ +WD
Sbjct: 98 YSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWD 133
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/90 (23%), Positives = 38/90 (42%)
Query: 220 QIASGASDKSVILWEVTTGQ---PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
Q+ S + +IL T + P+ + H ++ KFN + + SG D + +W+
Sbjct: 31 QVVSSGGGREIILGTERTSKLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWN 90
Query: 277 VKSRSHHPIQVRCLN-EALKEARDSITSVH 305
V C+N LK + +I +H
Sbjct: 91 VYGE--------CINYSVLKGHKGTILELH 112
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 145 (56.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 44/164 (26%), Positives = 73/164 (44%)
Query: 165 SGLMHTR---FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI 221
SG ++ R F DG T DK I++W+ ++K GH ++ D ++
Sbjct: 253 SGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRL 312
Query: 222 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
SG+ D+SV +W++ T Q VT V + D ++ +GS D TV +WD S
Sbjct: 313 VSGSGDRSVRIWDLRTSQ-CSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWD----S 367
Query: 282 HHPIQVRCLNEALKEARDSITSVHSLVKSTKNH-LSNGLLTKLV 324
V L+ + SV+S+ S +++G L + V
Sbjct: 368 TTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTV 411
Score = 115 (45.5 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRN-LLLKTYGGHAHEVND--ATAA--------C--- 216
RF DG + T G +K +++N L+ K ++E D TA+ C
Sbjct: 207 RFSRDGKFIAT-GCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSP 265
Query: 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
D +A+GA DK + +W+++T + ++ R H + + F D ++SGS D +V +WD
Sbjct: 266 DGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWD 325
Query: 277 VKS 279
+++
Sbjct: 326 LRT 328
Score = 109 (43.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 379 DSITSVHVSDH--EILTASLDCRIRRYDI-----RTGNLVTDYVGEP--IVDACFTRDCQ 429
DS+ SV S++ +I + SLD ++ + + + Y+G ++ C T D +
Sbjct: 388 DSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNE 447
Query: 430 CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFC-GSSDGK--IY 485
IL+ S D + +D+A+G L +GH++ + L+SK ++ IF GS D K I+
Sbjct: 448 YILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Query: 486 KW 487
KW
Sbjct: 508 KW 509
Score = 107 (42.7 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 40/150 (26%), Positives = 69/150 (46%)
Query: 391 ILTASLDCRIRRYDIRTGNL-VTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGE 449
+++ S D +R +D+RT +T + + + + D + I S D +R++D TG
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGF 371
Query: 450 LLEEY-KGHKSG----DFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS-QISTL-IHSV 502
L+E G+++G D + QI GS D + W L S + ST + +
Sbjct: 372 LVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYI 431
Query: 503 G-KAVVNSLCSHPTRKHIMSACGNN-VKLW 530
G K V S+C P ++I+S + V W
Sbjct: 432 GHKDFVLSVCCTPDNEYILSGSKDRGVIFW 461
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 145 (56.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 44/164 (26%), Positives = 73/164 (44%)
Query: 165 SGLMHTR---FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI 221
SG ++ R F DG T DK I++W+ ++K GH ++ D ++
Sbjct: 253 SGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRL 312
Query: 222 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
SG+ D+SV +W++ T Q VT V + D ++ +GS D TV +WD S
Sbjct: 313 VSGSGDRSVRIWDLRTSQ-CSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWD----S 367
Query: 282 HHPIQVRCLNEALKEARDSITSVHSLVKSTKNH-LSNGLLTKLV 324
V L+ + SV+S+ S +++G L + V
Sbjct: 368 TTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTV 411
Score = 115 (45.5 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRN-LLLKTYGGHAHEVND--ATAA--------C--- 216
RF DG + T G +K +++N L+ K ++E D TA+ C
Sbjct: 207 RFSRDGKFIAT-GCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSP 265
Query: 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
D +A+GA DK + +W+++T + ++ R H + + F D ++SGS D +V +WD
Sbjct: 266 DGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWD 325
Query: 277 VKS 279
+++
Sbjct: 326 LRT 328
Score = 109 (43.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 379 DSITSVHVSDH--EILTASLDCRIRRYDI-----RTGNLVTDYVGEP--IVDACFTRDCQ 429
DS+ SV S++ +I + SLD ++ + + + Y+G ++ C T D +
Sbjct: 388 DSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNE 447
Query: 430 CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFC-GSSDGK--IY 485
IL+ S D + +D+A+G L +GH++ + L+SK ++ IF GS D K I+
Sbjct: 448 YILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Query: 486 KW 487
KW
Sbjct: 508 KW 509
Score = 107 (42.7 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 40/150 (26%), Positives = 69/150 (46%)
Query: 391 ILTASLDCRIRRYDIRTGNL-VTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGE 449
+++ S D +R +D+RT +T + + + + D + I S D +R++D TG
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGF 371
Query: 450 LLEEY-KGHKSG----DFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS-QISTL-IHSV 502
L+E G+++G D + QI GS D + W L S + ST + +
Sbjct: 372 LVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYI 431
Query: 503 G-KAVVNSLCSHPTRKHIMSACGNN-VKLW 530
G K V S+C P ++I+S + V W
Sbjct: 432 GHKDFVLSVCCTPDNEYILSGSKDRGVIFW 461
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 171 (65.3 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 40/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + + +I+
Sbjct: 278 VVECISWAPESSYSTIS 294
Score = 130 (50.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDVKS 279
+ ++S S+D T+ MW+V++
Sbjct: 203 NGDHIVSASRDKTIKMWEVQT 223
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 77 (32.2 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 29/123 (23%), Positives = 49/123 (39%)
Query: 369 SCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
S + + EA S T +L+ S D I+ +DI TG + VG + F
Sbjct: 288 SSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH 347
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
+ IL+C+ D+ LR++D ++ H+ F + GS D +
Sbjct: 348 SGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 486 KWQ 488
W+
Sbjct: 406 VWE 408
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 173 (66.0 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSIT 302
V C++ A + A +I+
Sbjct: 278 VVECISWAPESAHPTIS 294
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V + S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H VT + F++ S V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 40/139 (28%), Positives = 63/139 (45%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SLMVSASEDATIKVWDYEAGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDV 277
+ ++S S+D T+ MW+V
Sbjct: 203 NGDHIVSASRDKTMKMWEV 221
Score = 74 (31.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 22/100 (22%), Positives = 42/100 (42%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDKATG 448
+L+ S D I+ +DI TG + VG + F + +++C+ D+ LR++D
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
++ H+ F + GS D + W+
Sbjct: 371 RCMKTLSAHEH--FVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 62 (26.9 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 24/102 (23%), Positives = 45/102 (44%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQL 489
+L+ S D+ ++++D +TG L GH D + L + +D K + W
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGH---DNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACGNNVKLW 530
+ + TL S + V SL H ++++ + VK+W
Sbjct: 368 KNKRCMKTL--SAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 186 (70.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 91/389 (23%), Positives = 165/389 (42%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI--ASGASDKS 229
F D SY TC DKK+K+W+ L+ TY H+ +VN S+ + A+G++D
Sbjct: 665 FSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSF 724
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP-IQVR 288
+ LW++ + H + VT +F+ D ++ S S D T+ +WDV+S + I V+
Sbjct: 725 LKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVK 784
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYL------NGLLSGVLMS 342
+ D V +VK + ++G +++ A + K L +GLL+ +
Sbjct: 785 ---RFFLSSEDPPEDVEVIVKCC-SWSADG--DRIIVAAKNKVLLLDIHTSGLLTEIHTG 838
Query: 343 TQHLMVLLDFLGSTQIGDVTPISIHNSCFQA--------LKEARDSITSVH-----VSDH 389
+ DF + + I++ C + + + R ++ VH
Sbjct: 839 HHSTIQYCDF---SPYDHLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGS 895
Query: 390 EILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGE 449
LTAS D IR ++ R + V + +D F + +L L+L TG+
Sbjct: 896 SFLTASDDQTIRVWETRKVCKNSAIVLKQEIDVVFQENEMMVLAVDNIRGLQLIAGKTGQ 955
Query: 450 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVN 508
+ +Y CCL + G +G I +L ++ S+ I H KAV +
Sbjct: 956 I--DYLPEAQVSC---CCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHK--KAVRH 1008
Query: 509 SLCSHPTRKHIMSACGNNVKLWTAE-EDY 536
+ + I S+ + +++W + E+Y
Sbjct: 1009 IQFTADGKTLISSSEDSVIQVWNWQTEEY 1037
Score = 159 (61.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG +CG+DK ++++ L H EV + D S IA+ + DK
Sbjct: 620 HACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDK 679
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSR 280
V +W+ TG+ V + EH+ +V C F S+ ++ +GS D+ + +WD+ +
Sbjct: 680 KVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQK 733
Score = 146 (56.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 41/120 (34%), Positives = 60/120 (50%)
Query: 417 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC-LDSKDSQI 475
+ + ACF++D Q I +C D+ L++F TGE L + K H+ + CC S DS I
Sbjct: 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED---EVLCCAFSSDDSYI 672
Query: 476 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 530
S D K+ W DS L+H+ + C H T K H++ A G+N +KLW
Sbjct: 673 ATCSVDKKVKIW---DSGT-GKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLW 728
Score = 110 (43.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
+NL H V A + D +IAS +DK++ +++ TG+ + + H +V C
Sbjct: 604 KNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCC 663
Query: 255 KFNEDSSVVISGSQDNTVMMWD------VKSRSHHPIQVRC 289
F+ D S + + S D V +WD V + H QV C
Sbjct: 664 AFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNC 704
Score = 103 (41.3 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 36/153 (23%), Positives = 65/153 (42%)
Query: 388 DHEILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDK 445
D +L+ S D ++ +++ TG + D+ ++ + D + S D+ +++
Sbjct: 1055 DSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSF 1114
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQI---STLIHS 501
L E KGH S + C S D + G +G+I W + D + + +
Sbjct: 1115 ELPSPLHELKGHNSC---VRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIE 1171
Query: 502 VGKAV----VNSLCSHPTRKHIMSACGNNVKLW 530
G A V +C P RK ++SA G +K W
Sbjct: 1172 EGTATHGGWVTDVCFSPDRKMLVSA-GGYLKWW 1203
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 202 (76.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 77/304 (25%), Positives = 133/304 (43%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L + + GH + + ++ Q+ASG+ D +++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 258 EDSSVVISGSQDNTVMMW--DVKSRSH----HPIQVRCLNEALKEARDSIT-SVHSLVKS 310
++ SGS+D TV +W +VK S H VR ++ + + +T S VK
Sbjct: 71 PSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFC-SDGQSLVTASDDKTVKV 129
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS-IHNS 369
H K +F+ +++N + L+V + ++ D T +H+
Sbjct: 130 WSTHRQ-----KFLFSLS-QHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 183
Query: 370 CFQALKEARDSITSV--HVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FT 425
C E +T V H S I AS+D ++ +D+RT L+ Y + V+A F
Sbjct: 184 C-----EHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 238
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKI 484
+LT S+D L++ D G LL GH+ + S+ + F G SD ++
Sbjct: 239 PSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF---SRTGEYFASGGSDEQV 295
Query: 485 YKWQ 488
W+
Sbjct: 296 MVWK 299
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 43/126 (34%), Positives = 65/126 (51%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG +T DK +K+W+ +R L + H + V A + D I S + DK+V
Sbjct: 111 FCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVK 170
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291
LW+ T+ + V + EH VT V F+ + + + S DNTV +WDV R+H +Q L+
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDV--RTHRLLQHYQLH 228
Query: 292 EALKEA 297
A A
Sbjct: 229 SAAVNA 234
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/104 (26%), Positives = 48/104 (46%)
Query: 178 YCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT 236
+ L GS DK +++W P + H V D + + + DK+V +W
Sbjct: 74 HLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + +H + V C +F+ D +++S S D TV +WD SR
Sbjct: 134 RQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSR 177
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 63/269 (23%), Positives = 110/269 (40%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D + +W+ + GH V + +ASG+ DK+V +W
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVK 93
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SRSHHPIQVRCLNE 292
+R H + V V F D +++ S D TV +W S S H VRC
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARF 153
Query: 293 ALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352
+ + R +++ K+ K L + + V ++ C++ G ++ V +
Sbjct: 154 S-PDGRLIVSASDD--KTVK--LWDKTSRECVHSY-CEH-GGFVTYVDFHPSGTCIAAAS 206
Query: 353 LGST-QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV 411
+ +T ++ DV + +Q L A + S H S + +LTAS D ++ D+ G L+
Sbjct: 207 MDNTVKVWDVRTHRLLQH-YQ-LHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLL 264
Query: 412 TDYVGE--PIVDACFTRDCQCILTCSTDE 438
G P F+R + + +DE
Sbjct: 265 YTLHGHQGPATTVAFSRTGEYFASGGSDE 293
Score = 126 (49.4 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 30/128 (23%), Positives = 63/128 (49%)
Query: 156 TVNRELFVLSGLMH------TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV 209
+ +R+ F+ S H RF DG ++ DK +KLW+ + +Y H V
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 210 NDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 269
+ IA+ + D +V +W+V T + ++ ++ H++ V + F+ + +++ S D
Sbjct: 191 TYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSD 250
Query: 270 NTVMMWDV 277
+T+ + D+
Sbjct: 251 STLKILDL 258
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 152 (58.6 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 32/113 (28%), Positives = 60/113 (53%)
Query: 180 LTCGSDKKIKLWNPYRN-------LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVIL 232
++ DKK+ +WN + K+ GH+ +ND + + D SG+ D SV L
Sbjct: 39 VSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRL 98
Query: 233 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 285
W+++ G+ +R + H S V V F+ D+ ++S S+D T+ +W+ ++ + I
Sbjct: 99 WDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTI 151
Score = 132 (51.5 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 27/108 (25%), Positives = 58/108 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ ++++ GH +V + + D+ QI S + DK++ LW
Sbjct: 83 DGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWN 142
Query: 235 VTTG-QPVRRWREHASKVTCVKFNE--DSSVVISGSQDNTVMMWDVKS 279
+ ++H +TCV+F+ + ++++S D V +W++K+
Sbjct: 143 TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKN 190
Score = 115 (45.5 bits), Expect = 0.00092, P = 0.00092
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239
++CG DK +K+WN L K GH +N T + D S ASG D LW+V G+
Sbjct: 175 VSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK 234
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ E S + + F+ + + D + +W+++S+
Sbjct: 235 HLYSL-ETGSTINSLCFSP-CDYWLCAATDRFIRIWNLESK 273
Score = 95 (38.5 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 203 GGHAHEVNDATAACDSS--QIASGASDKSVILWEVTT-------GQPVRRWREHASKVTC 253
GGH+ V + D I S + DK +I+W + T G + H+ +
Sbjct: 18 GGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIND 77
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D++V +WD+
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDL 101
Score = 92 (37.4 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 30/116 (25%), Positives = 56/116 (48%)
Query: 381 ITSVHVSDHEILTAS--LDCRIRRYDIRTG-NLVTDYVGEPIVDACFTRDCQCILTCSTD 437
+ +V +S L AS D + +D++ G +L + G I CF+ C L +TD
Sbjct: 204 LNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFS-PCDYWLCAATD 262
Query: 438 ECLRLFDKATGELLEEYKGHKSGDFRIECCLD---SKDSQI-FCGSSDGKIYKWQL 489
+R+++ + ++ E K + C S + Q+ +CGS+DG IY +++
Sbjct: 263 RFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEV 318
Score = 78 (32.5 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 22/103 (21%), Positives = 46/103 (44%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
I++C D+ +++++ +L + +GH +G + S G DG W +
Sbjct: 174 IVSCGWDKLVKVWNLKNCDLNKNLEGH-TGVLNT-VTISPDGSLCASGGKDGVAKLWDVK 231
Query: 491 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + +L G + +NSLC P + +A +++W E
Sbjct: 232 EGKHLYSL--ETG-STINSLCFSPCDYWLCAATDRFIRIWNLE 271
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 152 (58.6 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 32/113 (28%), Positives = 60/113 (53%)
Query: 180 LTCGSDKKIKLWNPYRN-------LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVIL 232
++ DKK+ +WN + K+ GH+ +ND + + D SG+ D SV L
Sbjct: 39 VSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRL 98
Query: 233 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 285
W+++ G+ +R + H S V V F+ D+ ++S S+D T+ +W+ ++ + I
Sbjct: 99 WDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTI 151
Score = 132 (51.5 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 27/108 (25%), Positives = 58/108 (53%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ ++++ GH +V + + D+ QI S + DK++ LW
Sbjct: 83 DGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWN 142
Query: 235 VTTG-QPVRRWREHASKVTCVKFNE--DSSVVISGSQDNTVMMWDVKS 279
+ ++H +TCV+F+ + ++++S D V +W++K+
Sbjct: 143 TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKN 190
Score = 115 (45.5 bits), Expect = 0.00092, P = 0.00092
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239
++CG DK +K+WN L K GH +N T + D S ASG D LW+V G+
Sbjct: 175 VSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK 234
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ E S + + F+ + + D + +W+++S+
Sbjct: 235 HLYSL-ETGSTINSLCFSP-CDYWLCAATDRFIRIWNLESK 273
Score = 95 (38.5 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 203 GGHAHEVNDATAACDSS--QIASGASDKSVILWEVTT-------GQPVRRWREHASKVTC 253
GGH+ V + D I S + DK +I+W + T G + H+ +
Sbjct: 18 GGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIND 77
Query: 254 VKFNEDSSVVISGSQDNTVMMWDV 277
V + D +SGS D++V +WD+
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDL 101
Score = 92 (37.4 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 30/116 (25%), Positives = 56/116 (48%)
Query: 381 ITSVHVSDHEILTAS--LDCRIRRYDIRTG-NLVTDYVGEPIVDACFTRDCQCILTCSTD 437
+ +V +S L AS D + +D++ G +L + G I CF+ C L +TD
Sbjct: 204 LNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFS-PCDYWLCAATD 262
Query: 438 ECLRLFDKATGELLEEYKGHKSGDFRIECCLD---SKDSQI-FCGSSDGKIYKWQL 489
+R+++ + ++ E K + C S + Q+ +CGS+DG IY +++
Sbjct: 263 RFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEV 318
Score = 78 (32.5 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 22/103 (21%), Positives = 46/103 (44%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
I++C D+ +++++ +L + +GH +G + S G DG W +
Sbjct: 174 IVSCGWDKLVKVWNLKNCDLNKNLEGH-TGVLNT-VTISPDGSLCASGGKDGVAKLWDVK 231
Query: 491 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ + +L G + +NSLC P + +A +++W E
Sbjct: 232 EGKHLYSL--ETG-STINSLCFSPCDYWLCAATDRFIRIWNLE 271
>UNIPROTKB|J3QKP9 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000578176 Uniprot:J3QKP9
Length = 247
Score = 182 (69.1 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 11 STLLKNLKHCDSTLWT-SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STS 67
S L+ +H + + S+L +R L R H LC+TPM+ A F++ + R
Sbjct: 11 SRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVC 70
Query: 68 PEDTPLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQ 107
PED PL+VQF +N+ + FV+A +C+ +DLN GCPQ
Sbjct: 71 PEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQ 110
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 170 (64.9 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI--ASGASDKS 229
F D + TC DKK+K+WN L+++Y H+ +VN +S+ + A+G+SD
Sbjct: 401 FSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYF 460
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ LW++ + H + V+ +F+ D ++ S S D T+ +WDVKS
Sbjct: 461 LKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKS 510
Score = 152 (58.6 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG +CG+DK ++++ L H EV + D IA+ + DK
Sbjct: 356 HACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDK 415
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSR 280
V +W TG+ V+ + EH+ +V C F +S+ ++ +GS D + +WD+ +
Sbjct: 416 KVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQK 469
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 417 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 476
+ + ACF+ D Q I +C D+ L++F TGE L E K H+ + CC S D +
Sbjct: 352 DAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHED---EVLCCAFSADDRFI 408
Query: 477 CGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 530
S D K+ W V + + + VN C H T H++ A G++ +KLW
Sbjct: 409 ATCSVDKKVKIWNSVTGELVQS--YDEHSEQVN--CCHFTNNSNHLLLATGSSDYFLKLW 464
Score = 105 (42.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
+NL H V A + D +IAS +DK++ +++ TG+ + + H +V C
Sbjct: 340 KNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCC 399
Query: 255 KFNEDSSVVISGSQDNTVMMWD------VKSRSHHPIQVRC 289
F+ D + + S D V +W+ V+S H QV C
Sbjct: 400 AFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNC 440
Score = 88 (36.0 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 37/158 (23%), Positives = 70/158 (44%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYV-GEPIVDAC-FTRDCQCILTCSTDECLRLF 443
+ + +L+ S D ++ ++I TG + D+V + V +C + D + S D+ +++
Sbjct: 798 LKNSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 857
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQIST---LI 499
L E +GHK + C S DS + G +G+I W + + + + ++
Sbjct: 858 SFDLLSPLHELRGHKGC---VRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVL 914
Query: 500 HSVGKAV----VNSLCSHPTRKHIMSACGNNVKLWTAE 533
G A V L P K ++SA G +K W +
Sbjct: 915 VEGGAATHGGWVTDLRFSPDGKMLVSA-GGYLKWWNVD 951
Score = 66 (28.3 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEAR 298
H + V ++F D VIS S D+ + +W+ +S +Q E +K+ R
Sbjct: 747 HKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSLQAH--QETVKDFR 796
Score = 59 (25.8 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 20/87 (22%), Positives = 38/87 (43%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLW-----NPYRNLLLKTY---GGHAHEVNDATAAC 216
+ + H RF D +C +D +KLW N +++ +K + + E + C
Sbjct: 480 NSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKC 539
Query: 217 -----DSSQIASGASDKSVILWEVTTG 238
D + + A +K V+L+ + TG
Sbjct: 540 CSWSADGASLVVAAKNK-VLLFNIHTG 565
Score = 48 (22.0 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 16/80 (20%), Positives = 28/80 (35%)
Query: 422 ACFTRDCQC-ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS 480
+C +C +L L++ + L + HK+ I+ D K+ + S
Sbjct: 711 SCIQGTSECFVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKN--VISSSD 768
Query: 481 DGKIYKWQLVDSSQISTLIH 500
D I W +S H
Sbjct: 769 DSAIQVWNWQSEETVSLQAH 788
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 155 (59.6 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 188 IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREH 247
IKLW+ ++T GH H V+ + I S + DK++ +WEV TG V+ + H
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 248 ASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPIQVRCLNEALKEARDSI 301
V V+ N+D +++ S S D TV +W V ++ H V C++ A + + SI
Sbjct: 63 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 122
Query: 302 T 302
+
Sbjct: 123 S 123
Score = 124 (48.7 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
+G + ++ DK IK+W +KT+ GH V D + IAS ++D++V +W
Sbjct: 32 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 91
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSS 261
V T + REH V C+ + +SS
Sbjct: 92 VATKECKAELREHEHVVECISWAPESS 118
Score = 49 (22.3 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
IL+C+ D+ LR++D ++ H+ F + GS D + W+
Sbjct: 148 ILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVKVWE 203
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 178 (67.7 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 84/340 (24%), Positives = 142/340 (41%)
Query: 203 GGHAHEVNDATAACDSSQIAS-GASDKS--VILWEVTTGQPVRRWREHASKVTCVKFNED 259
GG+ +A C QIA+ G S S ++L++ TG + + H+ + + + F+ D
Sbjct: 728 GGYGLHAGAFSADC--KQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSD 785
Query: 260 SSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEA--RDSITSVHSLVKSTKN-HLS 316
S +++GS D TV +W+ + V L A D V +++ K +
Sbjct: 786 SRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEAVKLWDAA 845
Query: 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFL-GSTQIGDVTPISIHNSCFQALK 375
G L K + +G V S + F G I D + + L+
Sbjct: 846 TGDLLKTL-------ASGFAGSVAFSPDSRQIAAGFKDGKIFIWDAA-----GTLQKTLE 893
Query: 376 EARDSITSVHVSDH--EILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCI 431
+I S+ S +++T S D I+R+DI G V + VG + + D + I
Sbjct: 894 RHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG-VQEAVGHSKHVTTMVLSPDGKVI 952
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
+ S D+ ++L+D ATG+L + GH ++ LD++ + C S KI W
Sbjct: 953 ASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQI-VSCSSEAVKI--WDAA- 1008
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLW 530
+ ++ S V + P KHI S C +KLW
Sbjct: 1009 TGKVQNSFES--DDVFTIVAVSPDGKHIASGHCNGRIKLW 1046
Score = 146 (56.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 70/303 (23%), Positives = 126/303 (41%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
+M F D +TC +D IK W+ + + G H+ V + D IASG++
Sbjct: 899 IMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVG-HSKHVTTMVLSPDGKVIASGSA 957
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPI 285
DK++ LW+ TG + H V V F+ D+ ++S S + V +WD + + +
Sbjct: 958 DKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE-AVKIWDAATGKVQNSF 1016
Query: 286 QVRCLNEALKEARDS--ITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMST 343
+ + + + D I S H + ++ G L K + +R K+ + L++ +
Sbjct: 1017 ESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKF-DSLVTTEVFDI 1075
Query: 344 QHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRY 403
Q L + + +TQI T + L + D ++ + D T L +R
Sbjct: 1076 Q----LQEAIFNTQI---TGLVFSPDAKLILSTSTDR--AIKLWD--AATGDLQ---KRL 1121
Query: 404 DIRTGNLVTDYV----GEP--IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 457
+ +++TD G P I F+ D Q I S D+ +R++ +Y G
Sbjct: 1122 PCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSIEKSLKASKYLGR 1181
Query: 458 KSG 460
G
Sbjct: 1182 AVG 1184
Score = 133 (51.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 33/104 (31%), Positives = 50/104 (48%)
Query: 191 WNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ---------PV 241
W P +++T GH+ V + D QIASG+ + LW+ TTG P
Sbjct: 609 WTP----MIQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPK 664
Query: 242 RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 285
RR++ +V + F DS ++ISG D +VM+WD + I
Sbjct: 665 RRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEI 708
Score = 128 (50.1 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D +T D ++LWN L KT+ GH V + D QI SG S ++V
Sbjct: 782 FSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSG-SIEAVK 840
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-----KSRSHHP 284
LW+ TG ++ + V F+ DS + +G +D + +WD K+ HP
Sbjct: 841 LWDAATGDLLKTLA--SGFAGSVAFSPDSRQIAAGFKDGKIFIWDAAGTLQKTLERHP 896
Score = 126 (49.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 188 IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREH 247
I L++ L K GH+HE + + DS Q+ +G+ D +V LW TTG + + H
Sbjct: 756 IMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGH 815
Query: 248 ASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
V V + D ++SGS + V +WD
Sbjct: 816 TGTVLSVAISSDGRQIVSGSIE-AVKLWD 843
Score = 103 (41.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 31/130 (23%), Positives = 63/130 (48%)
Query: 372 QALKEARDSITSVHVSDHEILTA-SLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDC 428
+A+ ++ T V D +++ + S D I+ +D TG+L G + + F+ D
Sbjct: 932 EAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDN 991
Query: 429 QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
+ I++CS+ E ++++D ATG++ ++ S D + I G +G+I W
Sbjct: 992 RQIVSCSS-EAVKIWDAATGKVQNSFE---SDDVFTIVAVSPDGKHIASGHCNGRIKLWD 1047
Query: 489 LVDSSQISTL 498
+ S + T+
Sbjct: 1048 MATGSLLKTM 1057
Score = 82 (33.9 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 28/77 (36%), Positives = 35/77 (45%)
Query: 172 FPVDGSYCLTCGSDKK-IKLWNPYRNLLLKTYGG-HA---HEVNDATAAC-----DSSQI 221
F DG + GSD IKLW+ L KT G H +++ DS I
Sbjct: 628 FSPDGKQ-IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDSKLI 686
Query: 222 ASGASDKSVILWEVTTG 238
SG D SV+LW+ TTG
Sbjct: 687 ISGYYDGSVMLWDTTTG 703
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 176 (67.0 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 41/134 (30%), Positives = 64/134 (47%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D + D +K+W+ L T GH V + DS +AS + D++V
Sbjct: 429 FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVR 488
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-HHPIQVRCL 290
+W+ G H+S VT V F+ DS ++ S S D TV +WD+++RS H +
Sbjct: 489 IWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDAT 548
Query: 291 NEALKEARDSITSV 304
EA++ D TS+
Sbjct: 549 IEAMRF--DKATSL 560
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 35/116 (30%), Positives = 52/116 (44%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D + D +K+W+ L T GH V + DS +AS + D +V
Sbjct: 387 FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVK 446
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-HPIQ 286
+W+ TG H V V F+ DS ++ S S D TV +WD + SH H ++
Sbjct: 447 IWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLE 502
Score = 150 (57.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 47/177 (26%), Positives = 78/177 (44%)
Query: 113 EGYGCALLSKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLT--VNRELFVLSGLMHT 170
EG+ A+LS +H +R+L + +++++ T + L S L+ +
Sbjct: 293 EGHEAAVLSVSYSHD---------SRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRS 343
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
S L SD +K+W+ L T GH V + DS +AS + D +V
Sbjct: 344 VIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTV 403
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-HHPIQ 286
+W+ TG H V V F+ DS ++ S S D+TV +WD + S H ++
Sbjct: 404 KIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE 460
Score = 135 (52.6 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 47/167 (28%), Positives = 82/167 (49%)
Query: 374 LKEARDSITSVHVS-DHEIL-TASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQ 429
L+ RD + SV S D ++L +AS D ++ +D TG+L G + F+ D Q
Sbjct: 375 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 434
Query: 430 CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQ 488
+ + S D ++++D TG L +GH+ D+ + + S DS++ +SD + + W
Sbjct: 435 LLASASDDSTVKIWDTGTGSLQHTLEGHR--DW-VRSVIFSHDSRLLASASDDRTVRIWD 491
Query: 489 LVDSSQISTLI-HSVGKAVVNSLC-SHPTRKHIMSACGNNVKLWTAE 533
S TL HS ++V S+ SH +R ++ V++W E
Sbjct: 492 TEKGSHKHTLEGHS---SLVTSVSFSHDSRLLASASNDQTVRIWDIE 535
Score = 131 (51.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 54/216 (25%), Positives = 99/216 (45%)
Query: 324 VFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIG--DVTP-ISIHNS-CFQALKEARD 379
+ A +C L S ++ S ++ F G + + P ++ H S C QAL+
Sbjct: 239 ISAIKCAPLQVYASALVFSPADSLIRKLF-GKEEPNWIETKPDVANHWSPCLQALEGHEA 297
Query: 380 SITSVHVS-DHEILTASLDCR-IRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCS 435
++ SV S D +L ++ D R ++ +D TG+L G + F+ D + +L +
Sbjct: 298 AVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSR-LLASA 356
Query: 436 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQ 494
+D ++++D TG L +GH+ D+ + + S DSQ+ +SD K W S
Sbjct: 357 SDSTVKIWDTGTGSLQHTLEGHR--DW-VRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 413
Query: 495 ISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
TL V + + SH ++ ++ + VK+W
Sbjct: 414 QHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIW 448
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 379 DSITSVHVS-DHEILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCS 435
D + SV S D +L ++ D ++ +D TG+L G + F+ D Q + + S
Sbjct: 339 DLVRSVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASAS 398
Query: 436 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQ 494
D ++++D TG L +GH+ D+ + + S DSQ+ +SD K W S
Sbjct: 399 DDSTVKIWDTGTGSLQHTLEGHR--DW-VRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 495 ISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 534
TL V + + SH +R ++ V++W E+
Sbjct: 456 QHTL-EGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEK 494
Score = 118 (46.6 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 191 WNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK 250
W+P L+ GH V + + DS +AS + D++V +W+ TG H+
Sbjct: 285 WSP----CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDL 340
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-HHPIQ 286
V V F+ DS ++ S S D+TV +WD + S H ++
Sbjct: 341 VRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLE 376
>UNIPROTKB|E1BH75 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:DAAA02049400 EMBL:DAAA02049401
IPI:IPI00906369 Ensembl:ENSBTAT00000057257 OMA:RMSILAW
Uniprot:E1BH75
Length = 270
Score = 189 (71.6 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STSPEDTPLVVQFASNNHDD 84
S+L +R L R H LC+TPM+ A F++ + R PED PL+VQF +N+ +
Sbjct: 28 SELAWRLLSRRHGAHLCYTPMLHAQVFVRDANYRKENLYCDVCPEDRPLIVQFCANDPEV 87
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 88 FVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL 122
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 179 (68.1 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP+ G L+C D KIKLW Y + L+T+ GH V D ++ S A D+ +
Sbjct: 298 FPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYI 357
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 279
LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 358 KLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRS 408
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 31/149 (20%), Positives = 70/149 (46%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGN-LVTDYVG--EPIVDACFTRDCQCILTCSTDECLRL 442
+S H +L+ S+DC+I+ +++ + ++G + + D CF L+ + D ++L
Sbjct: 300 LSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKL 359
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVDSSQISTLIHS 501
+D TG+ + + K + ++ D +F G SD KI +W + +
Sbjct: 360 WDTETGQCISRFTNRKV-PYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH 418
Query: 502 VGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+G AV + R+ + ++ ++++W
Sbjct: 419 LG-AVNTIVFVDENRRFVSTSDDKSLRVW 446
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/103 (21%), Positives = 48/103 (46%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDATAACDSSQIASGASDKSVILW 233
G+ L+ D+ IKLW+ + + + V + +G SDK ++ W
Sbjct: 345 GTRFLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQW 404
Query: 234 EVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
++ +G+ V+ + H V + F +++ +S S D ++ +W+
Sbjct: 405 DIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWE 447
Score = 69 (29.3 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 454 YKGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511
+KGH + C +D S D S + G +DGK+ W ++++ + I + K + ++
Sbjct: 503 FKGHMVAGYA--CQVDFSPDMSYVISGDADGKLNIWDW-KTTKLYSRIKAHDKVCIGAVW 559
Query: 512 S-HPTRKHIMSACGNNVKLW 530
H T K I +KLW
Sbjct: 560 HPHETSKVITCGWDGLIKLW 579
Score = 56 (24.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 27/102 (26%), Positives = 40/102 (39%)
Query: 388 DHEILTASLDCRIR--RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
D++IL R R + I G++V Y + VD F+ D +++ D L ++D
Sbjct: 483 DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ--VD--FSPDMSYVISGDADGKLNIWDW 538
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
T +L K H I CG DG I W
Sbjct: 539 KTTKLYSRIKAHDKVCIGAVWHPHETSKVITCGW-DGLIKLW 579
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 184 (69.8 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP+ G L+C D KIKLW Y + L+T+ GH+ V D +Q S A D+ +
Sbjct: 162 FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYL 221
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 279
LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 222 KLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRS 272
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 32/149 (21%), Positives = 70/149 (46%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGN-LVTDYVG--EPIVDACFTRDCQCILTCSTDECLRL 442
+S H +L+ S+DC+I+ +++ + ++G + + D CF L+ + D L+L
Sbjct: 164 LSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 223
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVDSSQISTLIHS 501
+D TG+ + + K + ++ D +F G SD KI +W + +
Sbjct: 224 WDTETGQCISRFTNRKV-PYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH 282
Query: 502 VGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+G AV + R+ + ++ ++++W
Sbjct: 283 LG-AVNTIVFVDENRRFVSTSDDKSLRVW 310
Score = 103 (41.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 22/107 (20%), Positives = 49/107 (45%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDATAACDSSQIASGASDKS 229
F G+ L+ D+ +KLW+ + + + V + +G SDK
Sbjct: 205 FNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKK 264
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
++ W++ +G+ V+ + H V + F +++ +S S D ++ +W+
Sbjct: 265 IVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWE 311
Score = 59 (25.8 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 454 YKGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511
+KGH + C +D S D S + G +GK+ W ++++ + + K + ++
Sbjct: 367 FKGHMVAGYA--CQVDFSPDMSYVISGDGNGKLNIWDW-KTTKLYSRFKAHDKVCIGAVW 423
Query: 512 S-HPTRKHIMSACGNNVKLW 530
H T K I +KLW
Sbjct: 424 HPHETSKVITCGWDGLIKLW 443
Score = 53 (23.7 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 26/102 (25%), Positives = 41/102 (40%)
Query: 388 DHEILTASLDCRIR--RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
D++IL R R + I G++V Y + VD F+ D +++ + L ++D
Sbjct: 347 DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ--VD--FSPDMSYVISGDGNGKLNIWDW 402
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
T +L +K H I CG DG I W
Sbjct: 403 KTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-DGLIKLW 443
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 184 (69.8 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP+ G L+C D KIKLW Y + L+T+ GH+ V D +Q S A D+ +
Sbjct: 165 FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYL 224
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 279
LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 225 KLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRS 275
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 32/149 (21%), Positives = 70/149 (46%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGN-LVTDYVG--EPIVDACFTRDCQCILTCSTDECLRL 442
+S H +L+ S+DC+I+ +++ + ++G + + D CF L+ + D L+L
Sbjct: 167 LSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 226
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVDSSQISTLIHS 501
+D TG+ + + K + ++ D +F G SD KI +W + +
Sbjct: 227 WDTETGQCISRFTNRKV-PYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH 285
Query: 502 VGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+G AV + R+ + ++ ++++W
Sbjct: 286 LG-AVNTIVFVDENRRFVSTSDDKSLRVW 313
Score = 103 (41.3 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/107 (20%), Positives = 49/107 (45%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDATAACDSSQIASGASDKS 229
F G+ L+ D+ +KLW+ + + + V + +G SDK
Sbjct: 208 FNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKK 267
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
++ W++ +G+ V+ + H V + F +++ +S S D ++ +W+
Sbjct: 268 IVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWE 314
Score = 59 (25.8 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 454 YKGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511
+KGH + C +D S D S + G +GK+ W ++++ + + K + ++
Sbjct: 370 FKGHMVAGYA--CQVDFSPDMSYVISGDGNGKLNIWDW-KTTKLYSRFKAHDKVCIGAVW 426
Query: 512 S-HPTRKHIMSACGNNVKLW 530
H T K I +KLW
Sbjct: 427 HPHETSKVITCGWDGLIKLW 446
Score = 53 (23.7 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 26/102 (25%), Positives = 41/102 (40%)
Query: 388 DHEILTASLDCRIR--RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
D++IL R R + I G++V Y + VD F+ D +++ + L ++D
Sbjct: 350 DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ--VD--FSPDMSYVISGDGNGKLNIWDW 405
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
T +L +K H I CG DG I W
Sbjct: 406 KTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-DGLIKLW 446
>UNIPROTKB|J3QQZ0 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000578907 Uniprot:J3QQZ0
Length = 301
Score = 192 (72.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 41/112 (36%), Positives = 61/112 (54%)
Query: 11 STLLKNLKHCDSTLWT-SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STS 67
S L+ +H + + S+L +R L R H LC+TPM+ A F++ + R
Sbjct: 11 SRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVC 70
Query: 68 PEDTPLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
PED PL+VQF +N+ + FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 71 PEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL 122
Score = 37 (18.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 367 HNSCFQALKEARDSITSVHVSDHEILTASLDCRIR 401
H F L++ D + + + HE L+ + C+IR
Sbjct: 117 HYGAF--LQDEWDLLQRMILLAHEKLSVPVTCKIR 149
>POMBASE|SPBC36B7.04 [details] [associations]
symbol:SPBC36B7.04 "tRNA dihydrouridine synthase Dus1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006400 "tRNA modification" evidence=ISO]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=ISO]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PomBase:SPBC36B7.04 GO:GO:0005739
GO:GO:0005634 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CU329671
GenomeReviews:CU329671_GR eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 PANTHER:PTHR11082 RefSeq:NP_595986.1
ProteinModelPortal:Q9HGN6 STRING:Q9HGN6 EnsemblFungi:SPBC36B7.04.1
GeneID:2541048 KEGG:spo:SPBC36B7.04 OMA:RCQPYFR OrthoDB:EOG480N5B
NextBio:20802162 Uniprot:Q9HGN6
Length = 399
Score = 197 (74.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 50/130 (38%), Positives = 73/130 (56%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTS--PEDTPLVVQFASNNHDD 84
S+L +R L R DLC++PM + F +S RN FST PE+ PL++QF N+ +
Sbjct: 29 SELPWRILARRSGADLCYSPMFHSRLFGESEDYRNKVFSTRTIPEERPLIIQFCGNDPEI 88
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRILYEL- 143
++A + AP+C+ VD+N GCPQ A K YG L Q L+ S+ IT++ EL
Sbjct: 89 MLKAAKIAAPYCDAVDVNLGCPQGIAKKGKYGSFL---QENWNLIESI---ITKLHTELS 142
Query: 144 -PKEWSIRVY 152
P IR++
Sbjct: 143 IPVTAKIRIF 152
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 205 (77.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 84/381 (22%), Positives = 167/381 (43%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI--ASGASDKS 229
F D + TC DKK+K+WN L+++Y H+ +VN +S+ + A+G+SD
Sbjct: 665 FSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYF 724
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP-IQVR 288
+ LW++ + H + V+ +F+ D ++ S S D T+ +WDVKS + I V+
Sbjct: 725 LKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVK 784
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLLTK-LVFAFRCKYLNGLLSGVLMSTQHLM 347
+E+++ + + + + S + K V F + GLL+ + +
Sbjct: 785 QFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNI-HTGGLLAEIHTGHHSTI 843
Query: 348 VLLDFLGSTQIGDVTP----ISIHN--SCFQALKEARDSITSVHVS-----DHEILTASL 396
DF S + V + + N SC + + + R ++ VH + LT+S
Sbjct: 844 QYCDFSPSNHLAVVALSQYCVELWNMDSCLK-VADCRGHLSWVHCAMFSPDGSSFLTSSD 902
Query: 397 DCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 456
D IR ++ + + V +D F + +L L++ + TG++ +Y
Sbjct: 903 DETIRLWETKKVCKNSAIVLNKKIDVVFQENEVMVLAVDNIRRLQVINGKTGQI--DYLT 960
Query: 457 HKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 515
+ ++ CC S Q GS DG I +L+++ + K V +
Sbjct: 961 ----EAQVSCCCLSPHLQYLAFGSDDGAIQVLELLNNRLFQSRTRH--KNTVRHIQFTTD 1014
Query: 516 RKHIMSACGNN-VKLWTAEED 535
K+++S+ ++ +++W + +
Sbjct: 1015 GKNVISSSDDSAIQVWNWQSE 1035
Score = 152 (58.6 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG +CG+DK ++++ L H EV + D IA+ + DK
Sbjct: 620 HACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDK 679
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSR 280
V +W TG+ V+ + EH+ +V C F +S+ ++ +GS D + +WD+ +
Sbjct: 680 KVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQK 733
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 417 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 476
+ + ACF+ D Q I +C D+ L++F TGE L E K H+ + CC S D +
Sbjct: 616 DAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHED---EVLCCAFSADDRFI 672
Query: 477 CGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 530
S D K+ W V + + + VN C H T H++ A G++ +KLW
Sbjct: 673 ATCSVDKKVKIWNSVTGELVQS--YDEHSEQVN--CCHFTNNSNHLLLATGSSDYFLKLW 728
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 149 (57.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 37/128 (28%), Positives = 62/128 (48%)
Query: 173 PVDGS-YCLTCGSDKKIKLW---NPYRNLL----LKTYG-------GHAHEVNDATAACD 217
P+D S + ++ DK + +W NP +N+ YG GH+H V D + D
Sbjct: 27 PIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGHSHFVQDVVLSSD 86
Query: 218 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
SG+ D + LW+++TG RR+ H V V F+ D+ ++S S+D T+ +W+
Sbjct: 87 GQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWNT 146
Query: 278 KSRSHHPI 285
+ I
Sbjct: 147 LGECKYTI 154
Score = 91 (37.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++ S D +++++ +L +GH G + + S D + G DG W L
Sbjct: 182 IVSGSWDRTVKVWNLTNCKLRCNLEGH--GGY-VNAVAVSPDGSLCASGGKDGVTLLWDL 238
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 536
+ ++ +L G ++++SLC P R + +A +++K+W E +
Sbjct: 239 AEGKRLYSL--DAG-SIIHSLCFSPNRYWLCAATQDSIKIWDLESKH 282
Score = 88 (36.0 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 26/91 (28%), Positives = 40/91 (43%)
Query: 204 GHAHEVNDATAACDSSQ-IASGASDKSVILWEVTT--------------GQPVRRWREHA 248
GH V D+S I S + DKS+++W++T G P RR H+
Sbjct: 16 GHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGHS 75
Query: 249 SKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
V V + D +SGS D + +WD+ +
Sbjct: 76 HFVQDVVLSSDGQFALSGSWDGELRLWDLST 106
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 39/109 (35%), Positives = 62/109 (56%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G Y T +DK +K+WN + +T GH VND + DS + S + DK++
Sbjct: 94 KFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
++E+ T + + + H + V C FN SS+V+SGS D +V +WDVK+
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 177 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S C+ SD K +K++ + + KT GH + V SS + SG+ D+SV +W+V
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
TG ++ H+ V+ V FN D S++ SGS D V +WD
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 71/300 (23%), Positives = 125/300 (41%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHS 306
H ++ KF+ + + S D TV +W++ H I R L D S S
Sbjct: 86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMD----HMICERTLTGHKLGVNDIAWSSDS 141
Query: 307 LVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMST----QHLMVLLDFLGSTQIGDVT 362
+ + + ++V + K L G + V L+V F S +I DV
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 363 PISIHNSCFQALKEARDSITSVHVS-DHEILTA-SLDCRIRRYDIRTGNLVTDYVGE--- 417
C + L D +++V + D ++ + S D +R +D G + V +
Sbjct: 202 T----GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 418 PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IF 476
P+ F+ + + IL + D L+L+D + G+ L++Y GH++ + I + I
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWII 317
Query: 477 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC---GNNVKLWTAE 533
GS D KIY W L + +I + + V+ S C HP + I S N + +W ++
Sbjct: 318 SGSEDCKIYIWNL-QTREIVQCLEGHTQPVLASDC-HPVQNIIASGALEPDNKIHIWRSD 375
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ + +KT H+ V+ + D S IASG+ D V +W+
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDT 242
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
GQ ++ + + V VKF+ + +++ + D+T+ +WD
Sbjct: 243 ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 39/109 (35%), Positives = 62/109 (56%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G Y T +DK +K+WN + +T GH VND + DS + S + DK++
Sbjct: 94 KFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
++E+ T + + + H + V C FN SS+V+SGS D +V +WDVK+
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 177 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S C+ SD K +K++ + + KT GH + V SS + SG+ D+SV +W+V
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
TG ++ H+ V+ V FN D S++ SGS D V +WD
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 71/300 (23%), Positives = 125/300 (41%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHS 306
H ++ KF+ + + S D TV +W++ H I R L D S S
Sbjct: 86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMD----HMICERTLTGHKLGVNDIAWSSDS 141
Query: 307 LVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMST----QHLMVLLDFLGSTQIGDVT 362
+ + + ++V + K L G + V L+V F S +I DV
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 363 PISIHNSCFQALKEARDSITSVHVS-DHEILTA-SLDCRIRRYDIRTGNLVTDYVGE--- 417
C + L D +++V + D ++ + S D +R +D G + V +
Sbjct: 202 T----GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 418 PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IF 476
P+ F+ + + IL + D L+L+D + G+ L++Y GH++ + I + I
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWII 317
Query: 477 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC---GNNVKLWTAE 533
GS D KIY W L + +I + + V+ S C HP + I S N + +W ++
Sbjct: 318 SGSEDCKIYIWNL-QTREIVQCLEGHTQPVLASDC-HPVQNIIASGALEPDNKIHIWRSD 375
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ + +KT H+ V+ + D S IASG+ D V +W+
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDT 242
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
GQ ++ + + V VKF+ + +++ + D+T+ +WD
Sbjct: 243 ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
>UNIPROTKB|J3QLE4 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000582529 Uniprot:J3QLE4
Length = 309
Score = 192 (72.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 41/112 (36%), Positives = 61/112 (54%)
Query: 11 STLLKNLKHCDSTLWT-SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STS 67
S L+ +H + + S+L +R L R H LC+TPM+ A F++ + R
Sbjct: 11 SRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVC 70
Query: 68 PEDTPLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
PED PL+VQF +N+ + FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 71 PEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL 122
Score = 37 (18.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 367 HNSCFQALKEARDSITSVHVSDHEILTASLDCRIR 401
H F L++ D + + + HE L+ + C+IR
Sbjct: 117 HYGAF--LQDEWDLLQRMILLAHEKLSVPVTCKIR 149
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 196 (74.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 76/304 (25%), Positives = 132/304 (43%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L + + GH V + ++ Q+ASG+ D +++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 258 EDSSVVISGSQDNTVMMW--DVKSRSH----HPIQVRCLNEALKEARDSIT-SVHSLVKS 310
++ SGS+D TV +W +VK S H VR ++ + + +T S VK
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFC-SDGQSFVTASDDKTVKV 129
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS-IHNS 369
H K +F+ +++N + L+V + ++ D T +H+
Sbjct: 130 WSTHRQ-----KFLFSLS-QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 183
Query: 370 CFQALKEARDSITSV--HVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FT 425
C E +T V H S I A +D ++ +D+RT L+ Y + V+A F
Sbjct: 184 C-----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 238
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKI 484
++T S+D L++ D G LL GH+ + S+ + F G SD ++
Sbjct: 239 PSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF---SRTGEYFASGGSDEQV 295
Query: 485 YKWQ 488
W+
Sbjct: 296 MVWK 299
Score = 181 (68.8 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 45/142 (31%), Positives = 71/142 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG +T DK +K+W+ +R L + H + V A + D I S + DK+V
Sbjct: 111 FCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291
LW+ T+ + V + EH VT V F+ + + + DNTV +WDV R+H +Q L+
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV--RTHRLLQHYQLH 228
Query: 292 EALKEARDSITSVHSLVKSTKN 313
A A S + LV ++ +
Sbjct: 229 SAAVNALSFHPSGNYLVTASSD 250
Score = 135 (52.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 29/104 (27%), Positives = 47/104 (45%)
Query: 178 YCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT 236
+ L GS DK +++W P + H V D + + DK+V +W
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTH 133
Query: 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + +H + V C KF+ D +++S S D TV +WD SR
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
Score = 126 (49.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 62/269 (23%), Positives = 109/269 (40%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D + +W+ + GH V + +ASG+ DK+V +W
Sbjct: 34 LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SRSHHPIQVRCLNE 292
+R H + V V F D ++ S D TV +W S S H VRC
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKF 153
Query: 293 ALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352
+ + R +++ K+ K L + + V ++ C++ G ++ V +
Sbjct: 154 S-PDGRLIVSASDD--KTVK--LWDKTSRECVHSY-CEH-GGFVTYVDFHPSGTCIAAAG 206
Query: 353 LGST-QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV 411
+ +T ++ DV + +Q L A + S H S + ++TAS D ++ D+ G L+
Sbjct: 207 MDNTVKVWDVRTHRLLQH-YQ-LHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLL 264
Query: 412 TDYVGE--PIVDACFTRDCQCILTCSTDE 438
G P F+R + + +DE
Sbjct: 265 YTLHGHQGPATTVAFSRTGEYFASGGSDE 293
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 29/128 (22%), Positives = 62/128 (48%)
Query: 156 TVNRELFVLSGLMH------TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV 209
+ +R+ F+ S H +F DG ++ DK +KLW+ + +Y H V
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 210 NDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 269
+ IA+ D +V +W+V T + ++ ++ H++ V + F+ + +++ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 250
Query: 270 NTVMMWDV 277
+T+ + D+
Sbjct: 251 STLKILDL 258
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 146 (56.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 173 PVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYG-------GHAHEVNDATAACDSSQIASG 224
P+D + + S DK I LW ++ K YG GH+H V D + D SG
Sbjct: 24 PIDNADIIVSASRDKSIILWKLTKDD--KAYGVAQRRLTGHSHFVEDVVLSSDGQFALSG 81
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP 284
+ D + LW++ G RR+ H V V F+ D+ ++S S+D T+ +W+ +
Sbjct: 82 SWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT 141
Query: 285 I 285
I
Sbjct: 142 I 142
Score = 103 (41.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 30/88 (34%), Positives = 42/88 (47%)
Query: 197 LLLK-TYGGHAHEVNDATAACDSSQIASGAS-DKSVILWEVTT-----GQPVRRWREHAS 249
L+LK T H V D++ I AS DKS+ILW++T G RR H+
Sbjct: 5 LVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSH 64
Query: 250 KVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V V + D +SGS D + +WD+
Sbjct: 65 FVEDVVLSSDGQFALSGSWDGELRLWDL 92
Score = 92 (37.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 24/104 (23%), Positives = 51/104 (49%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++ S D+ +++++ + +L GH +G + S D + G DG + W L
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGH-TG--YVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ ++ +L +V+++LC P R + +A + +K+W E
Sbjct: 224 AEGKKLYSL---EANSVIHALCFSPNRYWLCAATEHGIKIWDLE 264
Score = 77 (32.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 37/157 (23%), Positives = 69/157 (43%)
Query: 387 SDHEI-LTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLF 443
SD + L+ S D +R +D+ G +VG + ++ F+ D + I++ S D ++L+
Sbjct: 73 SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 132
Query: 444 DKATGE----LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499
+ GE + E +GH+ + ++ I S D + W L + STL
Sbjct: 133 N-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA 191
Query: 500 HSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEE 534
G V+++ P + ++ G + V LW E
Sbjct: 192 GHTG--YVSTVAVSPDGS-LCASGGKDGVVLLWDLAE 225
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 185 (70.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 41/113 (36%), Positives = 60/113 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPY-RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP+ G L+C D KIKLW Y L+T+ GH+ V D +Q S A D+ +
Sbjct: 297 FPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYL 356
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 279
LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 357 KLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRS 407
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 32/149 (21%), Positives = 70/149 (46%)
Query: 386 VSDHEILTASLDCRIRRYDIR-TGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRL 442
+S H +L+ S+DC+I+ +++ + ++G + + D CF L+ + D L+L
Sbjct: 299 LSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 358
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVDSSQISTLIHS 501
+D TG+ + + K + ++ D +F G SD KI +W + +
Sbjct: 359 WDTETGQCISRFTNRKV-PYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH 417
Query: 502 VGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+G AV + R+ + ++ ++++W
Sbjct: 418 LG-AVNTIVFVDENRRFVSTSDDKSLRVW 445
Score = 59 (25.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 454 YKGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511
+KGH + C +D S D S + G +GK+ W ++++ + + K + ++
Sbjct: 502 FKGHMVAGYA--CQVDFSPDMSYVISGDGNGKLNIWDW-KTTKLYSRFKAHDKVCIGAVW 558
Query: 512 S-HPTRKHIMSACGNNVKLW 530
H T K I +KLW
Sbjct: 559 HPHETSKVITCGWDGLIKLW 578
Score = 53 (23.7 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 26/102 (25%), Positives = 41/102 (40%)
Query: 388 DHEILTASLDCRIR--RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
D++IL R R + I G++V Y + VD F+ D +++ + L ++D
Sbjct: 482 DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ--VD--FSPDMSYVISGDGNGKLNIWDW 537
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
T +L +K H I CG DG I W
Sbjct: 538 KTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-DGLIKLW 578
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 192 (72.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/115 (29%), Positives = 68/115 (59%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 224
+ + +F +G + + +D I +W Y KT GH+ E++D + DSS++ S
Sbjct: 40 AAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSA 99
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ DK++ +W++ +G+ ++ + H+ V C FN S++++SGS D +V +W+VK+
Sbjct: 100 SDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Score = 173 (66.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 38/109 (34%), Positives = 59/109 (54%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD----SSQIASGASDKSV 230
D S ++ DK +K+W+ LKT GH+ D CD S+ I SG+ D+SV
Sbjct: 92 DSSRLVSASDDKTLKVWDMRSGKCLKTLKGHS----DFVFCCDFNPPSNLIVSGSFDESV 147
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+WEV TG+ ++ H+ ++ V FN + S+++SGS D +WD S
Sbjct: 148 KIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAAS 196
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 69/305 (22%), Positives = 131/305 (42%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSRSHHPIQVRCLNEALKEARDS 300
H++ ++ VKF+ + + S + D +++W K+ H +++ + + +R
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLV 97
Query: 301 ITSVHSLVKSTKNHLSNGLLT---KLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQ 357
S +K L T F F C + N +L+V F S +
Sbjct: 98 SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDF-N--------PPSNLIVSGSFDESVK 148
Query: 358 IGDVTPISIHNSCFQALKEARDSITSVHVSDHE--ILTASLDCRIRRYDIRTGNLVTDYV 415
I +V C + L D I++V+ + + I++ S D R +D +G +
Sbjct: 149 IWEVKT----GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA 204
Query: 416 GE---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKD 472
E P+ F+ + + ILT + D L+L+D + G L+ Y GHK+ + +
Sbjct: 205 DEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTG 264
Query: 473 SQ-IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VK 528
+ + GS D +Y W L + +I + V+++ C HPT+ I SA N +K
Sbjct: 265 RKWVVSGSEDNMVYIWNL-QTKEIVQRLQGHTDVVISAAC-HPTKNIIASAALENDKTIK 322
Query: 529 LWTAE 533
+W+++
Sbjct: 323 VWSSD 327
Score = 142 (55.0 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +K+W LKT H+ ++ C+ S I SG+ D +W+
Sbjct: 135 SNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDA 194
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
+GQ +R + + V+ VKF+ + +++ + DNT+ +WD
Sbjct: 195 ASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
+F +G Y LT D +KLW+ R LKTY GH +E + + + + SG+ D
Sbjct: 215 KFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSED 274
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN--TVMMW 275
V +W + T + V+R + H V + +++ S + +N T+ +W
Sbjct: 275 NMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 24/85 (28%), Positives = 47/85 (55%)
Query: 196 NLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
N L+ T GH+ ++ + + +AS A+D +I+W G + H+ +++ V
Sbjct: 28 NYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDV 87
Query: 255 KFNEDSSVVISGSQDNTVMMWDVKS 279
++ DSS ++S S D T+ +WD++S
Sbjct: 88 AWSSDSSRLVSASDDKTLKVWDMRS 112
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 142 (55.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 39/158 (24%), Positives = 69/158 (43%)
Query: 382 TSVHVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDACFTRDCQCILTCSTDECL 440
T +++ E L + D I Y + T + + + C ++D + LT
Sbjct: 348 TKLYIVGFEQLINAEDKHIAIYSVETRECIKKISLQSKVTSICLSKDSKYALTNLEPHTT 407
Query: 441 RLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLI 499
L+D ++ +Y GHK G+F I C KD + GS D KI W ++TL
Sbjct: 408 FLWDLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLS 467
Query: 500 HSVGKAVVNSLCSHPTRKHIMSACG--NNVKLWTAEED 535
V VN + +P + ++ G N V++W+ +++
Sbjct: 468 GHV--KCVNYVAYNPVDPYQFASAGDDNTVRIWSNKDN 503
Score = 137 (53.3 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 59/268 (22%), Positives = 123/268 (45%)
Query: 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI 264
H+ EV + + + +AS + DK+ I+++V + V R H V ++++ D ++
Sbjct: 212 HSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLL 271
Query: 265 SGSQDNTVMMWDV----KSRSH-HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
S S D +V++WD K R + H V C L + IT S H+++
Sbjct: 272 SCSCDKSVILWDAFTGEKLRDYKHGFSVSCCCW-LPDGLSFITG------SPDCHITHWS 324
Query: 320 LTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF--LGSTQIGDVTPISIHN-SCFQALKE 376
L + ++ + +N + L S + ++ F L + + + S+ C + +
Sbjct: 325 LNGEIL-YKWEDVN-IYDMALTSDGTKLYIVGFEQLINAEDKHIAIYSVETRECIKKIS- 381
Query: 377 ARDSITSVHVS-DHEILTASLDCRIR-RYDIRTGNLVTDYVGEPI----VDACFT-RDCQ 429
+ +TS+ +S D + +L+ +D+ +V Y+G + + +CF +D
Sbjct: 382 LQSKVTSICLSKDSKYALTNLEPHTTFLWDLEENRIVRQYMGHKLGNFLIGSCFGGKDDT 441
Query: 430 CILTCSTDECLRLFDKATGELLEEYKGH 457
+L+ S D+ +R++ + +G+LL GH
Sbjct: 442 FVLSGSEDDKIRIWHRESGKLLATLSGH 469
Score = 103 (41.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
+G Y + DK +++ + GH V + D + S + DKSVILW+
Sbjct: 224 NGRYLASASKDKTAIIFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWD 283
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
TG+ +R ++ H V+C + D I+GS D + W +
Sbjct: 284 AFTGEKLRDYK-HGFSVSCCCWLPDGLSFITGSPDCHITHWSL 325
Score = 51 (23.0 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 8/34 (23%), Positives = 21/34 (61%)
Query: 244 WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+ +H+ +V + ++ + + S S+D T +++DV
Sbjct: 209 FHDHSDEVWQISYSHNGRYLASASKDKTAIIFDV 242
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 183 (69.5 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
TRF D S L+C D I+ W+ + N +L Y GHA+ V D + S ASG+ D
Sbjct: 348 TRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDVDISPFSLYFASGSHD 405
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
++ LW P+R + H + V CVKF+ +S+ + +GS D TV +W +
Sbjct: 406 RTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Score = 173 (66.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 37/134 (27%), Positives = 70/134 (52%)
Query: 147 WSI-RVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH 205
WS R Y PL + L+ + +F + +Y T +DK ++LW+ + ++ + GH
Sbjct: 411 WSFDRTY-PLRIYAGH--LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 467
Query: 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVIS 265
V + + + +AS D+ + LW++ +G + R H +T + F+ DS ++ S
Sbjct: 468 RGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIAS 527
Query: 266 GSQDNTVMMWDVKS 279
S DN+V +WD++S
Sbjct: 528 ASMDNSVRVWDIRS 541
Score = 145 (56.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 183 GS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPV 241
GS D+ +LW+ R L+ Y GH +V+ +S+ +A+G++DK+V LW G V
Sbjct: 402 GSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV 461
Query: 242 RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSI 301
R + H V + F+ + + S +D + +WD+ S + L + L+ DSI
Sbjct: 462 RLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGT--------LFKELRGHTDSI 513
Query: 302 TSV 304
TS+
Sbjct: 514 TSL 516
Score = 108 (43.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRL 442
H + + + T S D +R + + GN V + G P++ F+ + + + + D+ L+L
Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKL 494
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 489
+D A+G L +E +GH I S DS + +S D + W +
Sbjct: 495 WDLASGTLFKELRGHTDS---ITSLAFSPDSGLIASASMDNSVRVWDI 539
Score = 93 (37.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 167 LMHTRFPVDGSYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
L++T S L G D IKLW+ R+ LK+ H + + ACD+ +
Sbjct: 270 LLNTAEISSDSKLLAAGFDNSCIKLWS-LRSKKLKSEPHHV-DTSRIRLACDTLEEEENE 327
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D TG ++ R H V +F DSS ++S S+D ++ WD+ S
Sbjct: 328 EDN--------TGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS 373
Score = 61 (26.5 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 22/88 (25%), Positives = 41/88 (46%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFD-KAT 447
+ +A D R++ +D+ +G L + G + I F+ D I + S D +R++D ++T
Sbjct: 483 LASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRST 542
Query: 448 ----------GELLEEYKGHKSGDFRIE 465
GEL+ Y G S ++
Sbjct: 543 CCNTPADGSSGELVGVYTGQMSNVLSVQ 570
Score = 39 (18.8 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 20/81 (24%), Positives = 33/81 (40%)
Query: 9 NRSTLLKNLK-HCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTS 67
N T +K L+ HC T L + S + D+ + SF + + + +
Sbjct: 330 NTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVW 388
Query: 68 PED-TPLVVQFASNNHDDFVR 87
D +P + FAS +HD R
Sbjct: 389 DVDISPFSLYFASGSHDRTAR 409
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 184 (69.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP+ G L+C D KIKLW Y + L+T+ GH+ V D +Q S A D+ +
Sbjct: 297 FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYL 356
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 279
LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 357 KLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRS 407
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 32/149 (21%), Positives = 70/149 (46%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGN-LVTDYVG--EPIVDACFTRDCQCILTCSTDECLRL 442
+S H +L+ S+DC+I+ +++ + ++G + + D CF L+ + D L+L
Sbjct: 299 LSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 358
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVDSSQISTLIHS 501
+D TG+ + + K + ++ D +F G SD KI +W + +
Sbjct: 359 WDTETGQCISRFTNRKV-PYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH 417
Query: 502 VGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+G AV + R+ + ++ ++++W
Sbjct: 418 LG-AVNTIVFVDENRRFVSTSDDKSLRVW 445
Score = 59 (25.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 454 YKGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511
+KGH + C +D S D S + G +GK+ W ++++ + + K + ++
Sbjct: 502 FKGHMVAGYA--CQVDFSPDMSYVISGDGNGKLNIWDW-KTTKLYSRFKAHDKVCIGAVW 558
Query: 512 S-HPTRKHIMSACGNNVKLW 530
H T K I +KLW
Sbjct: 559 HPHETSKVITCGWDGLIKLW 578
Score = 53 (23.7 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 26/102 (25%), Positives = 41/102 (40%)
Query: 388 DHEILTASLDCRIR--RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
D++IL R R + I G++V Y + VD F+ D +++ + L ++D
Sbjct: 482 DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ--VD--FSPDMSYVISGDGNGKLNIWDW 537
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
T +L +K H I CG DG I W
Sbjct: 538 KTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-DGLIKLW 578
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 184 (69.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP+ G L+C D KIKLW Y + L+T+ GH+ V D +Q S A D+ +
Sbjct: 297 FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYL 356
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 279
LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 357 KLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRS 407
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 32/149 (21%), Positives = 70/149 (46%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGN-LVTDYVG--EPIVDACFTRDCQCILTCSTDECLRL 442
+S H +L+ S+DC+I+ +++ + ++G + + D CF L+ + D L+L
Sbjct: 299 LSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 358
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVDSSQISTLIHS 501
+D TG+ + + K + ++ D +F G SD KI +W + +
Sbjct: 359 WDTETGQCISRFTNRKV-PYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH 417
Query: 502 VGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+G AV + R+ + ++ ++++W
Sbjct: 418 LG-AVNTIVFVDENRRFVSTSDDKSLRVW 445
Score = 59 (25.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 454 YKGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511
+KGH + C +D S D S + G +GK+ W ++++ + + K + ++
Sbjct: 502 FKGHMVAGYA--CQVDFSPDMSYVISGDGNGKLNIWDW-KTTKLYSRFKAHDKVCIGAVW 558
Query: 512 S-HPTRKHIMSACGNNVKLW 530
H T K I +KLW
Sbjct: 559 HPHETSKVITCGWDGLIKLW 578
Score = 53 (23.7 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 26/102 (25%), Positives = 41/102 (40%)
Query: 388 DHEILTASLDCRIR--RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
D++IL R R + I G++V Y + VD F+ D +++ + L ++D
Sbjct: 482 DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ--VD--FSPDMSYVISGDGNGKLNIWDW 537
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
T +L +K H I CG DG I W
Sbjct: 538 KTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-DGLIKLW 578
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 184 (69.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP+ G L+C D KIKLW Y + L+T+ GH+ V D +Q S A D+ +
Sbjct: 297 FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYL 356
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 279
LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 357 KLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRS 407
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 32/149 (21%), Positives = 70/149 (46%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGN-LVTDYVG--EPIVDACFTRDCQCILTCSTDECLRL 442
+S H +L+ S+DC+I+ +++ + ++G + + D CF L+ + D L+L
Sbjct: 299 LSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 358
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVDSSQISTLIHS 501
+D TG+ + + K + ++ D +F G SD KI +W + +
Sbjct: 359 WDTETGQCISRFTNRKV-PYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH 417
Query: 502 VGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+G AV + R+ + ++ ++++W
Sbjct: 418 LG-AVNTIVFVDENRRFVSTSDDKSLRVW 445
Score = 59 (25.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 454 YKGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511
+KGH + C +D S D S + G +GK+ W ++++ + + K + ++
Sbjct: 502 FKGHMVAGYA--CQVDFSPDMSYVISGDGNGKLNIWDW-KTTKLYSRFKAHDKVCIGAVW 558
Query: 512 S-HPTRKHIMSACGNNVKLW 530
H T K I +KLW
Sbjct: 559 HPHETSKVITCGWDGLIKLW 578
Score = 53 (23.7 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 26/102 (25%), Positives = 41/102 (40%)
Query: 388 DHEILTASLDCRIR--RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
D++IL R R + I G++V Y + VD F+ D +++ + L ++D
Sbjct: 482 DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ--VD--FSPDMSYVISGDGNGKLNIWDW 537
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
T +L +K H I CG DG I W
Sbjct: 538 KTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-DGLIKLW 578
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 187 (70.9 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 45/128 (35%), Positives = 67/128 (52%)
Query: 157 VNRELFVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVN 210
V E+ VL G + TRF D S L+C D I+ W+ + N +L Y GHA+ V
Sbjct: 331 VGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVW 388
Query: 211 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 270
D + S ASG+ D++ LW P+R + H + V CVKF+ +S+ + +GS D
Sbjct: 389 DVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 271 TVMMWDVK 278
TV +W +
Sbjct: 449 TVRLWSAQ 456
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 37/134 (27%), Positives = 70/134 (52%)
Query: 147 WSI-RVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH 205
WS R Y PL + L+ + +F + +Y T +DK ++LW+ + ++ + GH
Sbjct: 411 WSFDRTY-PLRIYAGH--LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 467
Query: 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVIS 265
V + + +AS D+ + LW++ +G + R H +T + F+ DSS++ S
Sbjct: 468 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIAS 527
Query: 266 GSQDNTVMMWDVKS 279
S DN+V +WD+++
Sbjct: 528 ASMDNSVRVWDIRN 541
Score = 145 (56.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 42/144 (29%), Positives = 69/144 (47%)
Query: 140 LYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGS-YCL--TCGS-DKKIKLWNPYR 195
L ++ SIR Y L + G + + VD S Y L GS D+ +LW+ R
Sbjct: 357 LLSCSEDMSIR-YWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDR 415
Query: 196 NLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255
L+ Y GH +V+ +S+ +A+G++DK+V LW G VR + H V +
Sbjct: 416 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 256 FNEDSSVVISGSQDNTVMMWDVKS 279
F+ + + S +D + +WD+ S
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLAS 499
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRL 442
H + + + T S D +R + + GN V + G P++ F+ + + + + D+ L+L
Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKL 494
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 489
+D A+G L +E +GH I S DS + +S D + W +
Sbjct: 495 WDLASGTLFKELRGHTDN---ITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 81 (33.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/104 (30%), Positives = 47/104 (45%)
Query: 177 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S L G D IKLW+ R+ LK H +V+ ACD I D+ +
Sbjct: 280 SKLLAAGFDNSCIKLWS-LRSKKLKPEP-HRVDVSRIHLACD---ILEEEDDE-----DD 329
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
G ++ R H V +F DSS ++S S+D ++ WD+ S
Sbjct: 330 DVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS 373
Score = 56 (24.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 371 FQALKEARDSITSVHVS-DHEIL-TASLDCRIRRYDIRTGNLV--TDYVGEPIVDACFTR 426
F+ L+ D+ITS+ S D ++ +AS+D +R +DIR + TD +V +T
Sbjct: 503 FKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGV-YTG 561
Query: 427 DCQCILTCSTDECLRLFDKATGELLEEYKGH 457
+L+ C L TG + +E + H
Sbjct: 562 QMSNVLSVQFMACNLLL--VTG-ITQENQEH 589
>UNIPROTKB|G3N340 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:DAAA02049400 EMBL:DAAA02049401
Ensembl:ENSBTAT00000063588 Uniprot:G3N340
Length = 475
Score = 195 (73.7 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 47/128 (36%), Positives = 67/128 (52%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STSPEDTPLVVQFASNNHDD 84
S+L +R L R H LC+TPM+ A F++ + R PED PL+VQF +N+ +
Sbjct: 28 SELAWRLLSRRHGAHLCYTPMLHAQVFVRDANYRKENLYCDVCPEDRPLIVQFCANDPEV 87
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRILYELP 144
FV+A +C+ +DLN GCPQ A + YG L Q LL + RT ++ P
Sbjct: 88 FVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL---QEEWDLLQRM-RTWGHMVVGCP 143
Query: 145 KEWSIRVY 152
IRV+
Sbjct: 144 VTCKIRVF 151
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 39/138 (28%), Positives = 70/138 (50%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S L GS D KIK+W + ++ + H+ V + + D SQ+ S + D++ + +
Sbjct: 275 SEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGL 334
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALK 295
+G+ ++ +R H S V F D S +I+ S D TV +WD S++ +Q L+
Sbjct: 335 KSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD--SKTTDCLQTFKPPPPLR 392
Query: 296 EARDSITSVHSLVKSTKN 313
S+ S+H K+T++
Sbjct: 393 GTDASVNSIHLFPKNTEH 410
Score = 140 (54.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAAC-----DSSQIA 222
RF DG + + D I++W+ L K A E ++D C DS +A
Sbjct: 220 RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLA 279
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
SG+ D + +W + TG +RR+ H+ VT + F+ D S ++S S D T + +KS
Sbjct: 280 SGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKS 336
Score = 103 (41.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 37/162 (22%), Positives = 77/162 (47%)
Query: 383 SVHVSD-HEILTASLDCRIRRYDIRTGNLVTDYVGEPIV---DAC------FTRDCQCIL 432
++ SD I+TAS DC ++ +D +T + + + P + DA F ++ + I+
Sbjct: 353 AIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIV 412
Query: 433 TCSTDECLRLFDKATGELLEEYK-GHKSG-DFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
C+ + + G++++ + G++ G DF + C+ +K I+C D K+Y +
Sbjct: 413 VCNKTSSIYIMT-LQGQVVKSFSSGNREGGDF-VAACVSTKGDWIYCIGEDKKLYCFNYQ 470
Query: 491 DSS-QISTLIHSVGKAVVNSLCSHPTRKHIMSACGN-NVKLW 530
+ ++H K V+ + HP R + + + +KLW
Sbjct: 471 SGGLEHFMMVHE--KDVIG-ITHHPHRNLLATYSEDCTMKLW 509
Score = 92 (37.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 25/94 (26%), Positives = 45/94 (47%)
Query: 196 NLLLKT--YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG--------QPVRRWR 245
N+L T +G +H A + D +AS + D + +W+ +G Q +
Sbjct: 202 NVLTHTIKFGKKSH-AECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFM 260
Query: 246 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
H V C+ F+ DS ++ SGSQD + +W +++
Sbjct: 261 MHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRT 294
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 182 (69.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
TRF D S L+C D I+ W+ + N +L Y GHA+ V D + S ASG+ D
Sbjct: 366 TRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDLDISPYSLYFASGSHD 423
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
++ LW P+R + H + V CVKF+ +S+ + +GS D TV +W +
Sbjct: 424 RTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 474
Score = 173 (66.0 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 37/134 (27%), Positives = 70/134 (52%)
Query: 147 WSI-RVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH 205
WS R Y PL + L+ + +F + +Y T +DK ++LW+ + ++ + GH
Sbjct: 429 WSFDRTY-PLRIYAGH--LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 485
Query: 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVIS 265
V + + +AS D+ + LW++ +G + R H +T + F+ DSS++ S
Sbjct: 486 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIAS 545
Query: 266 GSQDNTVMMWDVKS 279
S DN+V +WD+++
Sbjct: 546 ASMDNSVRVWDIRN 559
Score = 142 (55.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 183 GS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPV 241
GS D+ +LW+ R L+ Y GH +V+ +S+ +A+G++DK+V LW G V
Sbjct: 420 GSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV 479
Query: 242 RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
R + H V + F+ + + S +D + +WD+ S
Sbjct: 480 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 517
Score = 110 (43.8 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRL 442
H + + + T S D +R + + GN V + G P++ F+ + + + + D+ L+L
Sbjct: 453 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKL 512
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 489
+D A+G L +E +GH I S DS + +S D + W +
Sbjct: 513 WDLASGTLYKELRGHTDN---ITSLTFSPDSSLIASASMDNSVRVWDI 557
Score = 85 (35.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 167 LMHTRFPVDGSYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
L++T S L G D IKLW+ R+ LK+ H +V+ ACD +
Sbjct: 288 LLNTAEISPDSKLLAAGFDNSCIKLWS-LRSKKLKSEP-HQVDVSRIHLACDILEEEDDE 345
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D + G ++ R H V +F DSS ++S S+D ++ WD+ S
Sbjct: 346 DDNA--------GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS 391
Score = 60 (26.2 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 21/88 (23%), Positives = 40/88 (45%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFD---- 444
+ +A D R++ +D+ +G L + G + I F+ D I + S D +R++D
Sbjct: 501 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNT 560
Query: 445 -------KATGELLEEYKGHKSGDFRIE 465
++GEL+ Y G S ++
Sbjct: 561 YCSTPADGSSGELVGVYTGQMSNVLSVQ 588
Score = 37 (18.1 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 20/81 (24%), Positives = 33/81 (40%)
Query: 9 NRSTLLKNLK-HCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTS 67
N T +K L+ HC T L + S + D+ + SF + + + +
Sbjct: 348 NAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVW 406
Query: 68 PED-TPLVVQFASNNHDDFVR 87
D +P + FAS +HD R
Sbjct: 407 DLDISPYSLYFASGSHDRTAR 427
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 184 (69.8 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP+ G L+C D KIKLW Y + L+T+ GH+ V D +Q S A D+ +
Sbjct: 381 FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYL 440
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 279
LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 441 KLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRS 491
Score = 120 (47.3 bits), Expect = 0.00080, P = 0.00080
Identities = 32/149 (21%), Positives = 70/149 (46%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGN-LVTDYVG--EPIVDACFTRDCQCILTCSTDECLRL 442
+S H +L+ S+DC+I+ +++ + ++G + + D CF L+ + D L+L
Sbjct: 383 LSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 442
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKWQLVDSSQISTLIHS 501
+D TG+ + + K + ++ D +F G SD KI +W + +
Sbjct: 443 WDTETGQCISRFTNRKV-PYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH 501
Query: 502 VGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+G AV + R+ + ++ ++++W
Sbjct: 502 LG-AVNTIVFVDENRRFVSTSDDKSLRVW 529
Score = 59 (25.8 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 454 YKGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 511
+KGH + C +D S D S + G +GK+ W ++++ + + K + ++
Sbjct: 586 FKGHMVAGYA--CQVDFSPDMSYVISGDGNGKLNIWDW-KTTKLYSRFKAHDKVCIGAVW 642
Query: 512 S-HPTRKHIMSACGNNVKLW 530
H T K I +KLW
Sbjct: 643 HPHETSKVITCGWDGLIKLW 662
Score = 53 (23.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 26/102 (25%), Positives = 41/102 (40%)
Query: 388 DHEILTASLDCRIR--RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
D++IL R R + I G++V Y + VD F+ D +++ + L ++D
Sbjct: 566 DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ--VD--FSPDMSYVISGDGNGKLNIWDW 621
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
T +L +K H I CG DG I W
Sbjct: 622 KTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-DGLIKLW 662
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 138 RILYELPKEWSIRVYRPLTVNREL------FV--LSGLMHTRFPVDGSYCLTCGSDKKIK 189
R+L + +IR Y T+N + F +G+ F D + ++ DK +K
Sbjct: 37 RLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLK 96
Query: 190 LWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHAS 249
LW+ L+KT GH + S+ I SG+ D++V +W+VTTG+ ++ H+
Sbjct: 97 LWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSD 156
Query: 250 KVTCVKFNEDSSVVISGSQDNTVMMWD 276
VT V FN D S+++S S D +WD
Sbjct: 157 PVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Score = 172 (65.6 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 70/306 (22%), Positives = 137/306 (44%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH---HPIQVRCLNE-ALKEARDSIT 302
H V+ VKF+ D ++ S S D T+ + + + + P+Q +E + + S +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFS-S 81
Query: 303 SVHSLVKSTKNH------LSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356
+V ++ + + G L K + + N +++V F +
Sbjct: 82 DARFIVSASDDKTLKLWDVETGSLIKTLIG----HTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 357 QIGDVTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDY 414
+I DVT C + L D +T+V + D I+++S D R +D TG+ V
Sbjct: 138 RIWDVTT----GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 415 VGE---PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLD-S 470
+ + P+ F+ + + IL + D LRL++ ++ + L+ Y GH + + I +
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVT 253
Query: 471 KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACGNNVKL 529
+I GS D ++ W+L +S ++ + + V+N C HPT I S + V++
Sbjct: 254 NGKRIVSGSEDNCVHMWEL-NSKKLLQKLEGHTETVMNVAC-HPTENLIASGSLDKTVRI 311
Query: 530 WTAEED 535
WT +++
Sbjct: 312 WTQKKE 317
Score = 170 (64.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 171 RFPVDGSYCLTCGSDKKIKLW--NPYRNLL---LKTYGGHAHEVNDATAACDSSQIASGA 225
+F DG + +DK I+ + N + + ++ + GH + ++D + D+ I S +
Sbjct: 31 KFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSAS 90
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 285
DK++ LW+V TG ++ H + CV FN S++++SGS D TV +WDV +
Sbjct: 91 DDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG----- 145
Query: 286 QVRCLNEALKEARDSITSV 304
+CL + L D +T+V
Sbjct: 146 --KCL-KVLPAHSDPVTAV 161
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASD 227
RF +G + L D ++LWN LKTY GH + ++ A + + +I SG+ D
Sbjct: 205 RFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSED 264
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
V +WE+ + + +++ H V V + +++ SGS D TV +W K
Sbjct: 265 NCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQK 315
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 173 (66.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 45/170 (26%), Positives = 83/170 (48%)
Query: 114 GYGCALLSKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFP 173
G+ +L + +L S R T I++ L ++ + Y ++ ++S + +
Sbjct: 16 GWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISS-- 73
Query: 174 VDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILW 233
DG+Y L+ DK ++LW + + GH ++V + + D+ QI SG+ D+S+ LW
Sbjct: 74 -DGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLW 132
Query: 234 EVTTGQPVRRWRE--HASKVTCVKF--NEDSSVVISGSQDNTVMMWDVKS 279
T G E H+ V+CV+F N + V++S D V +W++ S
Sbjct: 133 N-TLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSS 181
Score = 125 (49.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 38/150 (25%), Positives = 64/150 (42%)
Query: 141 YELPKEW--SIRVYRPLT-VNRELFV--LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYR 195
Y L W ++R++ T FV + ++ F D ++ D+ IKLWN
Sbjct: 77 YALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLG 136
Query: 196 NLLLK-TYGGHAHEVNDATAACDSSQ--IASGASDKSVILWEVTTGQPVRRWREHASKVT 252
+ T GH+ V+ + + I S DK V +WE+++ + H +
Sbjct: 137 DCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYIN 196
Query: 253 CVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
V + D S+ SG +D T M+WD+ H
Sbjct: 197 TVTISPDGSLCASGGKDGTTMLWDLNESKH 226
Score = 56 (24.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 21/105 (20%), Positives = 50/105 (47%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL 489
I++ D+ +++++ ++ +L ++ GH +G I S D + G DG W L
Sbjct: 165 IVSSGWDKLVKVWELSSCKLQTDHIGH-TG--YINTVTISPDGSLCASGGKDGTTMLWDL 221
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 534
+S + +L +++L P R + +A +++ ++ E+
Sbjct: 222 NESKHLYSLN---ANDEIHALVFSPNRYWLCAATASSIIIFDLEK 263
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 130 (50.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 35/159 (22%), Positives = 76/159 (47%)
Query: 377 ARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDY--VGEPIVDACFTRDCQCILTC 434
A S + ++ +++ D +IR +DIR+ ++V + +G+ I + +L+C
Sbjct: 446 AGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESVVREMELLGK-ITALDLNPERTELLSC 504
Query: 435 STDECLRLFDKATGELLEEYK--GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS 492
S D+ L++ D T + + + G K G S + GS+DG +Y W ++ +
Sbjct: 505 SRDDLLKIIDLRTNAIKQSFSAPGFKCGSDWTRVVFSPDGSYVAAGSADGSLYVWSVL-T 563
Query: 493 SQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLW 530
++ ++ + +N++ P+ H++S G+ LW
Sbjct: 564 GKVEKVLSKQHSSSINAVAWAPSGLHVVSVDKGSRAVLW 602
Score = 114 (45.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 30/118 (25%), Positives = 57/118 (48%)
Query: 176 GSYCL-TCGSDKKIKLWNPYRNLL-LK-TYGGHAHEVNDATAACDSSQIASGASDKSVIL 232
GS L T G D+++KLW + + K + G + + + + ++D + +
Sbjct: 314 GSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAYLLAASNDFASRI 373
Query: 233 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
W V + H+ KV KF D++ ++SGS D T+ +WD++S+ +Q C+
Sbjct: 374 WTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCEEMQSLCV 431
Score = 95 (38.5 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLW--NPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+G+ F G+Y L +D ++W + YR L T GH+ +V A D+++I
Sbjct: 348 AGITSIEFDSAGAYLLAASNDFASRIWTVDDYR--LRHTLTGHSGKVLSAKFLLDNARIV 405
Query: 223 SGASDKSVILWEV 235
SG+ D+++ LW++
Sbjct: 406 SGSHDRTLKLWDL 418
Score = 71 (30.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 21/87 (24%), Positives = 38/87 (43%)
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK--VTCVKFNED 259
+ H EVN + S +A+G D+ V LWE + + S +T ++F+
Sbjct: 299 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSA 358
Query: 260 SSVVISGSQDNTVMMWDVKS-RSHHPI 285
+ +++ S D +W V R H +
Sbjct: 359 GAYLLAASNDFASRIWTVDDYRLRHTL 385
>FB|FBgn0031238 [details] [associations]
symbol:CG3645 species:7227 "Drosophila melanogaster"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:AE014134 Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042
KO:K05542 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:AY051946 EMBL:BT124833
RefSeq:NP_608507.1 RefSeq:NP_722619.1 UniGene:Dm.4432 SMR:Q9VPM1
IntAct:Q9VPM1 MINT:MINT-325917 STRING:Q9VPM1
EnsemblMetazoa:FBtr0078140 EnsemblMetazoa:FBtr0078141 GeneID:33190
KEGG:dme:Dmel_CG3645 UCSC:CG3645-RA FlyBase:FBgn0031238
InParanoid:Q9VPM1 OrthoDB:EOG41VHJ8 GenomeRNAi:33190 NextBio:782335
Uniprot:Q9VPM1
Length = 505
Score = 193 (73.0 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 45/129 (34%), Positives = 65/129 (50%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFV 86
S+L +R L R + +LC++PM A+ F K R + T PED PL++QF N+ +
Sbjct: 39 SELAWRMLCRRYGAELCYSPMYHANLFATDPKYRKDALQTCPEDRPLIIQFCGNDAQQIL 98
Query: 87 RATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRILYELPKE 146
A HC+ VD+N GCPQ A + YG L Q LL + T+ L +P
Sbjct: 99 DAALLAQDHCDAVDINLGCPQAIAKRGHYGSFL---QDEWELLTEIVSTLHAKL-AVPVT 154
Query: 147 WSIRVYRPL 155
IR++ L
Sbjct: 155 CKIRIFEDL 163
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 194 (73.4 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 78/354 (22%), Positives = 142/354 (40%)
Query: 154 PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213
PL + R + G +H+ P +Y D W K GH V
Sbjct: 255 PLHIKRRKIIKPGFIHS--PWKSAYIRQHRIDTN---WRRGELRSPKVLKGHDDHVITCL 309
Query: 214 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 273
C ++I SG+ D ++ +W TG+ +R H V + ++ ++ISGS D T+
Sbjct: 310 QFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLK 366
Query: 274 MWDVKSRS--H----HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAF 327
+W+ ++ H H VRC++ K V + +L V A
Sbjct: 367 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 426
Query: 328 RCKYLNG--LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385
RC +G ++SG DF+ ++ D P + +C L+ + + S+
Sbjct: 427 RCVQYDGRRVVSGAY----------DFM--VKVWD--PET--ETCLHTLQGHTNRVYSLQ 470
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
+++ SLD IR +D+ TGN + G + + +++ + D ++++D
Sbjct: 471 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 530
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499
TG+ L+ +G + C +K+ + S DG + W L I L+
Sbjct: 531 KTGQCLQTLQGPSKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 583
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 71/299 (23%), Positives = 133/299 (44%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 370
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H----HPIQVRC 289
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H H VRC
Sbjct: 371 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 428
Query: 290 LN----EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
+ + A D + V T H G T V++ + ++ ++SG L +
Sbjct: 429 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQFDGIH-VVSGSLDT--- 483
Query: 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITS-VHVSDHEILTASLDCRIRRYD 404
S ++ DV +C L S+TS + + D+ +++ + D ++ +D
Sbjct: 484 ---------SIRVWDVET----GNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWD 529
Query: 405 IRTGNLVTDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG 460
I+TG + G C + ++T S D ++L+D TGE + +SG
Sbjct: 530 IKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 588
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 178 (67.7 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 41/136 (30%), Positives = 66/136 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G +C +D IKLW+ ++T GH H V+ + I S + DK++
Sbjct: 158 FDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPI 285
+WEV TG V+ + H V V+ N+D +++ S S D TV +W V ++ H
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEH 277
Query: 286 QVRCLNEALKEARDSI 301
V C++ A + A +I
Sbjct: 278 VVECISWAPESAHPTI 293
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ + H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 40/139 (28%), Positives = 63/139 (45%)
Query: 144 PKEWSIRVYRPLTVNRELFVLSGLMH--TRF---PVDGSYCLTCGSDKKIKLWNPYRNLL 198
PKEW + RP E + LSG TR PV S ++ D IK+W+
Sbjct: 91 PKEW---IPRP----PEKYALSGHRSPVTRVIFHPVF-SVIVSASEDATIKVWDHETGDF 142
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
+T GH V D + +AS ++D ++ LW+ + +R H V+ V
Sbjct: 143 ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 DSSVVISGSQDNTVMMWDV 277
+ ++S S+D T+ MW+V
Sbjct: 203 NGDHIVSASRDKTIKMWEV 221
Score = 56 (24.8 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 20/100 (20%), Positives = 39/100 (39%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDKATG 448
+L+ S D I+ +D+ G + VG + + I++C+ D+ LR++D
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNK 370
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
+ H+ F + GS D + W+
Sbjct: 371 RCTKTLSAHEH--FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 194 (73.4 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 78/354 (22%), Positives = 142/354 (40%)
Query: 154 PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213
PL + R + G +H+ P +Y D W K GH V
Sbjct: 255 PLHIKRRKIIKPGFIHS--PWKSAYIRQHRIDTN---WRRGELKSPKVLKGHDDHVITCL 309
Query: 214 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 273
C ++I SG+ D ++ +W TG+ +R H V + ++ ++ISGS D T+
Sbjct: 310 QFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLK 366
Query: 274 MWDVKSRS--H----HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAF 327
+W+ ++ H H VRC++ K V + +L V A
Sbjct: 367 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 426
Query: 328 RCKYLNG--LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385
RC +G ++SG DF+ ++ D P + +C L+ + + S+
Sbjct: 427 RCVQYDGRRVVSGAY----------DFM--VKVWD--PET--ETCLHTLQGHTNRVYSLQ 470
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
+++ SLD IR +D+ TGN + G + + +++ + D ++++D
Sbjct: 471 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 530
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499
TG+ L+ +G + C +K+ + S DG + W L I L+
Sbjct: 531 KTGQCLQTLQGPSKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 583
Score = 183 (69.5 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 370
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H----HPIQVRC 289
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H H VRC
Sbjct: 371 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 428
Query: 290 LN----EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
+ + A D + V T H G T V++ + ++ ++SG L +
Sbjct: 429 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQFDGIH-VVSGSLDT--- 483
Query: 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITS-VHVSDHEILTASLDCRIRRYD 404
S ++ DV +C L S+TS + + D+ +++ + D ++ +D
Sbjct: 484 ---------SIRVWDVET----GNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWD 529
Query: 405 IRTGNLVTDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
I+TG + G C + ++T S D ++L+D TGE + +SG
Sbjct: 530 IKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG 589
Query: 462 FR-IECCLDSKDSQIFC--GSSDG 482
+ + + ++++ C GS +G
Sbjct: 590 SGGVVWRIRASNTKLVCAVGSRNG 613
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 194 (73.4 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 223
LS + F + +Y LT SDK +LW+ +R ++ + GH V A D +AS
Sbjct: 463 LSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMAS 522
Query: 224 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSRSH 282
S+ + LW++ TG+ ++ R H + + F+ +S+V++SG D TV WDV K+ +
Sbjct: 523 ADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYN 582
Query: 283 HPI 285
+P+
Sbjct: 583 NPV 585
Score = 175 (66.7 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 43/128 (33%), Positives = 60/128 (46%)
Query: 165 SGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 223
SG ++ T F D Y L+C D +LW+ L Y GH V D A+
Sbjct: 379 SGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFAT 438
Query: 224 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 283
+ D++ LW P+R + H S V CV F+ +S+ V++GS D T +WDV R H
Sbjct: 439 ASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVH-RGH- 496
Query: 284 PIQVRCLN 291
VR N
Sbjct: 497 --SVRVFN 502
Score = 149 (57.5 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G Y T D+ +LW+ L+ + GH +V+ T +S+ + +G+SDK+ LW+V
Sbjct: 433 GHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV 492
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
G VR + H VT V D + S + + +WD+
Sbjct: 493 HRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDI 534
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 195 (73.7 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 38/131 (29%), Positives = 70/131 (53%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
W+ Y+PL + L+ + TRF + +Y T SD+ ++LW+ ++ + GH
Sbjct: 568 WATDHYQPLRIFAGH--LADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHK 625
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
++ + + +ASG++D V+LW++ G + + H + +KF+ D ++ SG
Sbjct: 626 GPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASG 685
Query: 267 SQDNTVMMWDV 277
S DNTV +WDV
Sbjct: 686 SIDNTVRLWDV 696
Score = 168 (64.2 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 37/106 (34%), Positives = 53/106 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D +Y L+ D I+LW+ L Y GH + V D + SG D+
Sbjct: 507 FSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVAR 566
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
LW QP+R + H + VTC +F+ +S+ V +GS D TV +WDV
Sbjct: 567 LWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDV 612
Score = 161 (61.7 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 33/108 (30%), Positives = 58/108 (53%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
T+F G Y ++ G D+ +LW L+ + GH +V +S+ +A+G+SD++
Sbjct: 547 TQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRT 606
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V LW+V G VR + H + + F+ + + SGS D V++WD+
Sbjct: 607 VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 193 (73.0 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 78/354 (22%), Positives = 142/354 (40%)
Query: 154 PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213
PL + R + G +H+ P +Y D W K GH V
Sbjct: 213 PLHIKRRKVIKPGFIHS--PWKSAYIRQHRIDTN---WRRGELKSPKVLKGHDDHVITCL 267
Query: 214 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 273
C ++I SG+ D ++ +W TG+ +R H V + ++ ++ISGS D T+
Sbjct: 268 QFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLK 324
Query: 274 MWDVKSRS--H----HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAF 327
+W+ ++ H H VRC++ K V + +L V A
Sbjct: 325 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 384
Query: 328 RCKYLNG--LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385
RC +G ++SG DF+ ++ D P + +C L+ + + S+
Sbjct: 385 RCVQYDGRRVVSGAY----------DFM--VKVWD--PET--ETCLHTLQGHTNRVYSLQ 428
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
+++ SLD IR +D+ TGN + G + + +++ + D ++++D
Sbjct: 429 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 488
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499
TG+ L+ +G + C +K+ + S DG + W L I L+
Sbjct: 489 KTGQCLQTLQGPNKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 541
Score = 183 (69.5 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 271 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 328
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H----HPIQVRC 289
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H H VRC
Sbjct: 329 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 386
Query: 290 LN----EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
+ + A D + V T H G T V++ + ++ ++SG L +
Sbjct: 387 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQFDGIH-VVSGSLDT--- 441
Query: 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITS-VHVSDHEILTASLDCRIRRYD 404
S ++ DV +C L S+TS + + D+ +++ + D ++ +D
Sbjct: 442 ---------SIRVWDVET----GNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWD 487
Query: 405 IRTGNLVTDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
I+TG + G C + ++T S D ++L+D TGE + +SG
Sbjct: 488 IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG 547
Query: 462 FR-IECCLDSKDSQIFC--GSSDG 482
+ + + ++++ C GS +G
Sbjct: 548 SGGVVWRIRASNTKLVCAVGSRNG 571
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 165 (63.1 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 40/118 (33%), Positives = 66/118 (55%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE----VNDATAA-C---DSSQIA 222
RF DG Y +T D I++WN + K A + ++DA C D+ +A
Sbjct: 221 RFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 223 SGASDKSVILWEVTTGQPVRRW-REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+GA D + +W++ +GQ +RR+ R H+ VTC+ F++DSS ++S S D T+ + +KS
Sbjct: 281 TGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKS 338
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-GHAHEVNDATAACDSSQIASGASDKSV 230
F D T D KIK+W L+ + H+ V + + DSSQI S + D+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ + +G+ ++ +R H+S V F +D +IS S D TV +W+VK+
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKT 380
Score = 117 (46.2 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 38/148 (25%), Positives = 67/148 (45%)
Query: 388 DHEIL-TASLDCRIRRYDIRTGNLVTDYV---GEPIVDACFTRDCQCILTCSTDECLRLF 443
D E+L T + D +I+ + I++G + + + + F++D IL+ S D+ +R+
Sbjct: 275 DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIH 334
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 503
+G+ L+E++GH S F E I SSDG + W V +++ S S+G
Sbjct: 335 GLKSGKTLKEFRGHSS--FVNEATFTQDGHYIISASSDGTVKVWN-VKTTECSNTFKSLG 391
Query: 504 KAV-----VNSLCSHPTRKHIMSACGNN 526
VNS+ P C +
Sbjct: 392 STAGTDITVNSVILLPKNPEHFVVCNRS 419
Score = 87 (35.7 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 21/87 (24%), Positives = 47/87 (54%)
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK---------VT 252
+G +H V A + D + +G+ D + +W TTG+ +R+ ++ ++ V
Sbjct: 211 FGQKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGK-IRKDLKYQAQDNFMMMDDAVL 268
Query: 253 CVKFNEDSSVVISGSQDNTVMMWDVKS 279
C+ F+ D+ ++ +G+QD + +W ++S
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS 295
Score = 73 (30.8 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 42/186 (22%), Positives = 80/186 (43%)
Query: 364 ISIHN-SCFQALKEARDSITSVH----VSD-HEILTASLDCRIRRYDIRTGNLVTDY--- 414
I IH + LKE R + V+ D H I++AS D ++ ++++T +
Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNTFKSL 390
Query: 415 ---VGEPI-VDACFT--RDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SGDFRIEC 466
G I V++ ++ + + C+ + + + G+++ + K GDF + C
Sbjct: 391 GSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIVRSFSSGKREGGDF-VCC 448
Query: 467 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGN 525
L + I+C D +Y + V TL +H K V+ + HP + I + +
Sbjct: 449 ALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHE--KDVIG-IAHHPHQNLIATYSED 505
Query: 526 NV-KLW 530
+ KLW
Sbjct: 506 GLLKLW 511
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 167 (63.8 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 44/170 (25%), Positives = 82/170 (48%)
Query: 114 GYGCALLSKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFP 173
G+ +L + +L S R T I++ L ++ Y ++ ++S + +
Sbjct: 16 GWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISS-- 73
Query: 174 VDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILW 233
DG+Y L+ DK ++LW +T+ GH ++V + + D+ QI SG+ D+++ LW
Sbjct: 74 -DGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLW 132
Query: 234 EVTTGQPVRRWRE--HASKVTCVKF--NEDSSVVISGSQDNTVMMWDVKS 279
T G + H V+CV+F N + V++S D V +W++ S
Sbjct: 133 N-TLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELAS 181
Score = 61 (26.5 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 34/117 (29%), Positives = 52/117 (44%)
Query: 381 ITSVHVSDHEILTAS--LDCRIRRYDIRTG-NLVTDYVGEPIVDACFTRDCQCILTCSTD 437
I +V +S L AS D +D+ +L + + G+ I F+ + + L +T
Sbjct: 195 INTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDEIHALVFSPN-RYWLCAATS 253
Query: 438 ECLRLFD---KA-TGELLEEY--KGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKW 487
+ +FD K+ EL EY KG KS + S D Q +F G +D KI W
Sbjct: 254 SSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYTDNKIRAW 310
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 187 (70.9 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 72/302 (23%), Positives = 131/302 (43%)
Query: 183 GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR 242
G+ + ++ PYR+L KT GH ++ + D + +AS + DK++ILW T +
Sbjct: 22 GTSGNVPIYKPYRHL--KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIH 79
Query: 243 RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSIT 302
R+ H+S ++ + ++ DS S S D T+ +WD +S P + CL + L+ + +
Sbjct: 80 RYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS----PYE--CL-KVLRGHTNFVF 132
Query: 303 SVHSLVKSTKNHLSNGLLTKLVFAF-----RC----KYLNGLLSGVLMSTQ-HLMVLLDF 352
V+ N + +G + + + +C K + +S V + L+V
Sbjct: 133 CVN--FNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASH 190
Query: 353 LGSTQIGDVTPISIHNSCFQAL---KEARDSITSVHVSDHEILTASLDCRIRRYDIRTGN 409
GS +I D +C + L K S + IL A+LD ++ + TG
Sbjct: 191 DGSCKIWDAK----EGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGK 246
Query: 410 LVTDYVGEPIVDACFTR-----DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 464
+ Y G C T + + I++ S D C+ L+D +L+ +GH +
Sbjct: 247 FLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISV 306
Query: 465 EC 466
C
Sbjct: 307 SC 308
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 76/300 (25%), Positives = 135/300 (45%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-HPIQVRCLNEALKEARDSITSVH 305
H + ++CVKF+ D +++ S S D T+++W + S H + + + + S S +
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGH--SSGISDLAWSSDSHY 99
Query: 306 SLVKSTKNHLSNGLLTKLVFAFRC-KYLNGLLSGVLMST----QHLMVLLDFLGSTQIGD 360
+ S L + + C K L G + V +L+V F + +I +
Sbjct: 100 TCSASDDCTLR---IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWE 156
Query: 361 VTPISIHNSCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYVGE- 417
V C + +K I+SVH + D I++AS D + +D + G + + +
Sbjct: 157 VKT----GKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDK 212
Query: 418 -PIVD-ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ- 474
P V A F+ + + IL + D L+L + ATG+ L+ Y GH + F I + +
Sbjct: 213 SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY 272
Query: 475 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN----VKLW 530
I GS D +Y W L + I + AV++ C HP + I S+ GN+ +++W
Sbjct: 273 IVSGSEDNCVYLWDL-QARNILQRLEGHTDAVISVSC-HPVQNEISSS-GNHLDKTIRIW 329
Score = 172 (65.6 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 37/117 (31%), Positives = 61/117 (52%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQI 221
SG+ + D Y + D +++W+ PY LK GH + V S+ I
Sbjct: 86 SGISDLAWSSDSHYTCSASDDCTLRIWDARSPYE--CLKVLRGHTNFVFCVNFNPPSNLI 143
Query: 222 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
SG+ D+++ +WEV TG+ VR + H+ ++ V FN D S+++S S D + +WD K
Sbjct: 144 VSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Score = 172 (65.6 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 148 SIRVYRPLTVNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKT 201
++ +Y+P R L L G HT +F DG+ + DK + LW+ L+
Sbjct: 26 NVPIYKPY---RHLKTLEG--HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHR 80
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDS 260
Y GH+ ++D + DS S + D ++ +W+ + + ++ R H + V CV FN S
Sbjct: 81 YEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS 140
Query: 261 SVVISGSQDNTVMMWDVKS 279
++++SGS D T+ +W+VK+
Sbjct: 141 NLIVSGSFDETIRIWEVKT 159
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 52/223 (23%), Positives = 101/223 (45%)
Query: 105 CPQR-WAIKEGYGCALLSKQRTHPLL---FSLPRT--ITRILYELPKEWSIRVYRPLTVN 158
C R W + Y C + + T+ + F+ P ++ E + W ++ + + +
Sbjct: 107 CTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMI 166
Query: 159 RELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY-GGHAHEVNDATAACD 217
+ + +H F DGS ++ D K+W+ LKT + V+ A + +
Sbjct: 167 KAHSMPISSVH--FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPN 224
Query: 218 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK--FN-EDSSVVISGSQDNTVMM 274
I D ++ L TG+ ++ + H +KV C+ F+ + ++SGS+DN V +
Sbjct: 225 GKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYL 284
Query: 275 WDVKSRSHHPIQVRCLNEALKEARDSITS--VHSLVKSTKNHL 315
WD+++R+ I R E +A S++ V + + S+ NHL
Sbjct: 285 WDLQARN---ILQRL--EGHTDAVISVSCHPVQNEISSSGNHL 322
Score = 115 (45.5 bits), Expect = 0.00098, P = 0.00098
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA---CDSSQIASGASD 227
+F +G + L D +KL N LK Y GH ++V T+A + I SG+ D
Sbjct: 220 KFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSED 279
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNE-DSSVVISGSQ-DNTVMMW 275
V LW++ ++R H V V + + + SG+ D T+ +W
Sbjct: 280 NCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 193 (73.0 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 78/354 (22%), Positives = 142/354 (40%)
Query: 154 PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213
PL + R + G +H+ P +Y D W K GH V
Sbjct: 253 PLHIKRRKVIKPGFIHS--PWKSAYIRQHRIDTN---WRRGELKSPKVLKGHDDHVITCL 307
Query: 214 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 273
C ++I SG+ D ++ +W TG+ +R H V + ++ ++ISGS D T+
Sbjct: 308 QFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLK 364
Query: 274 MWDVKSRS--H----HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAF 327
+W+ ++ H H VRC++ K V + +L V A
Sbjct: 365 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 424
Query: 328 RCKYLNG--LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385
RC +G ++SG DF+ ++ D P + +C L+ + + S+
Sbjct: 425 RCVQYDGRRVVSGAY----------DFM--VKVWD--PET--ETCLHTLQGHTNRVYSLQ 468
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
+++ SLD IR +D+ TGN + G + + +++ + D ++++D
Sbjct: 469 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 528
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499
TG+ L+ +G + C +K+ + S DG + W L I L+
Sbjct: 529 KTGQCLQTLQGPNKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 581
Score = 183 (69.5 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 311 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 368
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H----HPIQVRC 289
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H H VRC
Sbjct: 369 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 426
Query: 290 LN----EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
+ + A D + V T H G T V++ + ++ ++SG L +
Sbjct: 427 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQFDGIH-VVSGSLDT--- 481
Query: 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITS-VHVSDHEILTASLDCRIRRYD 404
S ++ DV +C L S+TS + + D+ +++ + D ++ +D
Sbjct: 482 ---------SIRVWDVET----GNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWD 527
Query: 405 IRTGNLVTDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
I+TG + G C + ++T S D ++L+D TGE + +SG
Sbjct: 528 IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG 587
Query: 462 FR-IECCLDSKDSQIFC--GSSDG 482
+ + + ++++ C GS +G
Sbjct: 588 SGGVVWRIRASNTKLVCAVGSRNG 611
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 188 (71.2 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 73/304 (24%), Positives = 131/304 (43%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L + + GH V + + Q+ASG+ D +++W + R+ H VTCV F+
Sbjct: 42 LERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 101
Query: 258 EDSSVVISGSQDNTVMMW--DVKSRSH----HPIQVRCLNEALKEARDSIT-SVHSLVKS 310
++ SGS+D TV +W ++K S H VR ++ + + +T S +K
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFC-SDGQSFVTASDDKTIKV 160
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS-IHNS 369
H K +F+ +++N + L+V + ++ D T +H+
Sbjct: 161 WSTHRQ-----KFLFSLS-QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 214
Query: 370 CFQALKEARDSITSV--HVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FT 425
C E +T V H S + A +D ++ +D+RT L+ Y + V+A F
Sbjct: 215 C-----EHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 269
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKI 484
++T S+D L++ D G LL GH+ + S+ + F G SD ++
Sbjct: 270 PSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF---SRTGEYFASGGSDEQV 326
Query: 485 YKWQ 488
W+
Sbjct: 327 MVWK 330
Score = 183 (69.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 47/142 (33%), Positives = 71/142 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG +T DK IK+W+ +R L + H + V A + D I S + DK+V
Sbjct: 142 FCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 201
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291
LW+ T+ + V + EH VT V F+ + V + DNTV +WDV R+H +Q L+
Sbjct: 202 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV--RTHRLLQHYQLH 259
Query: 292 EALKEARDSITSVHSLVKSTKN 313
A A S + LV ++ +
Sbjct: 260 SAAVNALSFHPSGNYLVTASSD 281
Score = 134 (52.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 178 YCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT 236
+ L GS DK +++W P + H V D + + DK++ +W
Sbjct: 105 HLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 164
Query: 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + +H + V C KF+ D +++S S D TV +WD SR
Sbjct: 165 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 208
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 28/128 (21%), Positives = 62/128 (48%)
Query: 156 TVNRELFVLSGLMH------TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV 209
+ +R+ F+ S H +F DG ++ DK +KLW+ + +Y H V
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 221
Query: 210 NDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 269
+ +A+ D +V +W+V T + ++ ++ H++ V + F+ + +++ S D
Sbjct: 222 TYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 281
Query: 270 NTVMMWDV 277
+T+ + D+
Sbjct: 282 STLKILDL 289
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 62/269 (23%), Positives = 109/269 (40%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D + +W+ + GH V + +ASG+ DK+V +W
Sbjct: 65 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIK 124
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SRSHHPIQVRCLNE 292
+R H + V V F D ++ S D T+ +W S S H VRC
Sbjct: 125 GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKF 184
Query: 293 ALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352
+ + R +++ K+ K L + + V ++ C++ G ++ V V
Sbjct: 185 S-PDGRLIVSASDD--KTVK--LWDKTSRECVHSY-CEH-GGFVTYVDFHPSGTCVAAAG 237
Query: 353 LGST-QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV 411
+ +T ++ DV + +Q L A + S H S + ++TAS D ++ D+ G L+
Sbjct: 238 MDNTVKVWDVRTHRLLQH-YQ-LHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLL 295
Query: 412 TDYVGE--PIVDACFTRDCQCILTCSTDE 438
G P F+R + + +DE
Sbjct: 296 YTLHGHQGPATTVAFSRTGEYFASGGSDE 324
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 133 (51.9 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 181 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ--IASGASDKSVILWEVTTG 238
T G++ +K+W+ + ++ GH ++ + +ASGA D V LW++ +
Sbjct: 120 TGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSS 179
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
+ + + H+S + + F S ++SGS+D TV +W++K RS
Sbjct: 180 RSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRS 222
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + DK IKLW+ ++ GH V + S Q+ASG+ D+++ +W
Sbjct: 476 DGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN 535
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
V T Q V+ H + + + + V+S + D V +W + S
Sbjct: 536 VDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSS 580
Score = 128 (50.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 194 YRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTC 253
+ N + T H +VN + D IAS + DK++ LW+ +TG+ V R H V
Sbjct: 453 FSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWA 512
Query: 254 VKFNEDSSVVISGSQDNTVMMWDVKSR 280
FN S + SGS D T+ +W+V ++
Sbjct: 513 CSFNPFSRQLASGSGDRTIRIWNVDTQ 539
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D+ I++WN ++T GH + +Q+ S A+D V +W +++G
Sbjct: 522 LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG 581
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW-DV 277
+ V H +V + D S+++SG D V +W DV
Sbjct: 582 ECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDV 621
Score = 111 (44.1 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 32/109 (29%), Positives = 57/109 (52%)
Query: 425 TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 484
++D + I + S D+ ++L+D +TGE++ +GH+ G + C + Q+ GS D I
Sbjct: 474 SKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWA--CSFNPFSRQLASGSGDRTI 531
Query: 485 YKWQLVDSSQ-ISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWT 531
W VD+ Q + TL G + S T+ ++SA + VK+W+
Sbjct: 532 RIWN-VDTQQCVQTLEGHTGAILKLIYISQGTQ--VVSAAADGLVKVWS 577
Score = 103 (41.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 33/143 (23%), Positives = 63/143 (44%)
Query: 143 LPKEWSIR-VYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSD-KKIKLWNPYRNLLLK 200
L K W I Y + V+S L + ++ L G+D +++LW+ + +
Sbjct: 126 LVKVWDIAGAYVTHSFRGHGGVISALCFGKH--QNTWVLASGADDSRVRLWDLNSSRSMA 183
Query: 201 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWRE-HASK-VTCVKFNE 258
+ GH+ + T S + SG+ DK+V +W + VR H+ + + V
Sbjct: 184 VFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQP 243
Query: 259 DSSVVISGSQDNTVMMWDVKSRS 281
+ ++ + + N ++ WD KS S
Sbjct: 244 EEKILYTAGEGNLILAWDWKSGS 266
Score = 90 (36.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 378 RDSITSVHVS-DHEIL-TASLDCRIRRYDIRTGNLVTDYVGEPI-VDAC-FTRDCQCILT 433
RD + ++ VS D I+ +AS D I+ +D TG +V G V AC F + + +
Sbjct: 466 RD-VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLAS 524
Query: 434 CSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS 493
S D +R+++ T + ++ +GH ++ S+ +Q+ ++DG + W L
Sbjct: 525 GSGDRTIRIWNVDTQQCVQTLEGHTGAILKL--IYISQGTQVVSAAADGLVKVWSLSSGE 582
Query: 494 QISTL 498
++TL
Sbjct: 583 CVATL 587
Score = 73 (30.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/61 (16%), Positives = 34/61 (55%)
Query: 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
DS ++ + + + ++E+ +G+ ++ + H + V + + ++++ +G + V +WD
Sbjct: 72 DSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWD 131
Query: 277 V 277
+
Sbjct: 132 I 132
Score = 59 (25.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 24/83 (28%), Positives = 36/83 (43%)
Query: 197 LLLKTYGGHAHEVND-ATAACDSSQIASGASDKSVILWEVTTGQPVRRWRE-HASKVTCV 254
+ +K G EV D A D + S VI T G V E H V +
Sbjct: 314 ITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVIS---TDGTQVFGVLEGHTDIVLTL 370
Query: 255 KFNEDSSVVISGSQDNTVMMWDV 277
+ED + +G++DNTV +W++
Sbjct: 371 DSSEDGVWLATGAKDNTVRLWNL 393
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 458 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS--QISTLIHSVGKAVVNSLCS-HP 514
K+ D + SKD +I +S K K L DSS ++ ++ + V CS +P
Sbjct: 462 KAHDRDVNAIQVSKDGRIIASASQDKTIK--LWDSSTGEVVGVLRGHRRGVW--ACSFNP 517
Query: 515 TRKHIMSACGNN-VKLWTAE 533
+ + S G+ +++W +
Sbjct: 518 FSRQLASGSGDRTIRIWNVD 537
Score = 43 (20.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 175 DGSYCLTCGSDKKIKLWN 192
DG + T D ++LWN
Sbjct: 375 DGVWLATGAKDNTVRLWN 392
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 193 (73.0 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 78/354 (22%), Positives = 142/354 (40%)
Query: 154 PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213
PL + R + G +H+ P +Y D W K GH V
Sbjct: 333 PLHIKRRKVIKPGFIHS--PWKSAYIRQHRIDTN---WRRGELKSPKVLKGHDDHVITCL 387
Query: 214 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 273
C ++I SG+ D ++ +W TG+ +R H V + ++ ++ISGS D T+
Sbjct: 388 QFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLK 444
Query: 274 MWDVKSRS--H----HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAF 327
+W+ ++ H H VRC++ K V + +L V A
Sbjct: 445 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 504
Query: 328 RCKYLNG--LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385
RC +G ++SG DF+ ++ D P + +C L+ + + S+
Sbjct: 505 RCVQYDGRRVVSGAY----------DFM--VKVWD--PET--ETCLHTLQGHTNRVYSLQ 548
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
+++ SLD IR +D+ TGN + G + + +++ + D ++++D
Sbjct: 549 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 608
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499
TG+ L+ +G + C +K+ + S DG + W L I L+
Sbjct: 609 KTGQCLQTLQGPNKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 661
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 391 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 448
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H----HPIQVRC 289
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H H VRC
Sbjct: 449 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 506
Query: 290 LN----EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
+ + A D + V T H G T V++ + ++ ++SG L +
Sbjct: 507 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQFDGIH-VVSGSLDT--- 561
Query: 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITS-VHVSDHEILTASLDCRIRRYD 404
S ++ DV +C L S+TS + + D+ +++ + D ++ +D
Sbjct: 562 ---------SIRVWDVET----GNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWD 607
Query: 405 IRTGNLVTDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
I+TG + G C + ++T S D ++L+D TGE + +SG
Sbjct: 608 IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG 667
Query: 462 FR-IECCLDSKDSQIFC--GSSDG 482
+ + + ++++ C GS +G
Sbjct: 668 SGGVVWRIRASNTKLVCAVGSRNG 691
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 193 (73.0 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 78/354 (22%), Positives = 142/354 (40%)
Query: 154 PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213
PL + R + G +H+ P +Y D W K GH V
Sbjct: 338 PLHIKRRKVIKPGFIHS--PWKSAYIRQHRIDTN---WRRGELKSPKVLKGHDDHVITCL 392
Query: 214 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 273
C ++I SG+ D ++ +W TG+ +R H V + ++ ++ISGS D T+
Sbjct: 393 QFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLK 449
Query: 274 MWDVKSRS--H----HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAF 327
+W+ ++ H H VRC++ K V + +L V A
Sbjct: 450 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 509
Query: 328 RCKYLNG--LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385
RC +G ++SG DF+ ++ D P + +C L+ + + S+
Sbjct: 510 RCVQYDGRRVVSGAY----------DFM--VKVWD--PET--ETCLHTLQGHTNRVYSLQ 553
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
+++ SLD IR +D+ TGN + G + + +++ + D ++++D
Sbjct: 554 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 613
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499
TG+ L+ +G + C +K+ + S DG + W L I L+
Sbjct: 614 KTGQCLQTLQGPNKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 666
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 396 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 453
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H----HPIQVRC 289
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H H VRC
Sbjct: 454 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 511
Query: 290 LN----EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
+ + A D + V T H G T V++ + ++ ++SG L +
Sbjct: 512 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQFDGIH-VVSGSLDT--- 566
Query: 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITS-VHVSDHEILTASLDCRIRRYD 404
S ++ DV +C L S+TS + + D+ +++ + D ++ +D
Sbjct: 567 ---------SIRVWDVET----GNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWD 612
Query: 405 IRTGNLVTDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
I+TG + G C + ++T S D ++L+D TGE + +SG
Sbjct: 613 IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG 672
Query: 462 FR-IECCLDSKDSQIFC--GSSDG 482
+ + + ++++ C GS +G
Sbjct: 673 SGGVVWRIRASNTKLVCAVGSRNG 696
>UNIPROTKB|E1C6D2 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:AADN02029975 IPI:IPI00599742
ProteinModelPortal:E1C6D2 Ensembl:ENSGALT00000004402 Uniprot:E1C6D2
Length = 478
Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 39/95 (41%), Positives = 57/95 (60%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSK-ARNNEFSTS-PEDTPLVVQFASNNHDD 84
S+L +R L R H LC+TPM+ A F++ + R N + + PED PL+VQF +N+ +
Sbjct: 28 SELAWRLLSRRHGAQLCYTPMLHAQVFLRDANYRRENLYGEACPEDRPLIVQFCANDPEV 87
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 88 FVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL 122
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 40/134 (29%), Positives = 73/134 (54%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
W+ Y+PL + L+ + TRF + +Y T +D+ ++LW+ ++ + GH
Sbjct: 372 WATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 429
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
++ T + + +A+GA+D V+LW++ G V + H V ++F+ D ++ SG
Sbjct: 430 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 489
Query: 267 SQDNTVMMWD-VKS 279
S DNTV +WD VK+
Sbjct: 490 SMDNTVRLWDAVKA 503
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 161 LFVLSGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 219
L+ SG ++ F D +Y L+ D ++LW+ L Y GH + V D +
Sbjct: 299 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 358
Query: 220 QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
SG D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 416
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
T+F G Y ++ G D+ +LW L+ + GH +VN +S+ +A+G++D++
Sbjct: 351 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 410
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V LW+V G VR + H + + F+ + + +G+ D V++WD+
Sbjct: 411 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 458
Score = 113 (44.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 382 TSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDEC 439
T H + + + T S D +R +D+ GN V + G PI F+ + + + T +TD
Sbjct: 393 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 452
Query: 440 LRLFDKATGELLEEYKGHKSGDFRIECCLD-SKDSQIFC-GSSDGKIYKWQLV 490
+ L+D G ++ E KGH C L S+D +I GS D + W V
Sbjct: 453 VLLWDIGHGLMVGELKGHTD----TVCSLRFSRDGEILASGSMDNTVRLWDAV 501
Score = 80 (33.2 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
LK GH+ V A+ + D + + S + D +V LW + T + ++ H V +F+
Sbjct: 296 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 355
Query: 259 DSSVVISGSQDNTVMMWDVKSRSHH-PIQV 287
+SG D +W + H+ P+++
Sbjct: 356 YGYYFVSGGHDRVARLW---ATDHYQPLRI 382
Score = 67 (28.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 215 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 274
A D S I + D + + T ++ H+ V F+ D + ++S S+D TV +
Sbjct: 270 AADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 329
Query: 275 WDVKS 279
W +++
Sbjct: 330 WSLQT 334
Score = 55 (24.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
DSS IA G +D +V +W VT P K+ VK D S++ S D + D
Sbjct: 241 DSSLIAGGFADSTVRVWSVT---P--------KKLRSVKQAADLSLIDKESDDVLERIMD 289
Query: 277 VKSRS 281
K+ S
Sbjct: 290 EKTAS 294
>UNIPROTKB|E1BWI8 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AADN02029975
IPI:IPI00820914 ProteinModelPortal:E1BWI8
Ensembl:ENSGALT00000038896 NextBio:20820685 Uniprot:E1BWI8
Length = 486
Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 39/95 (41%), Positives = 57/95 (60%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSK-ARNNEFSTS-PEDTPLVVQFASNNHDD 84
S+L +R L R H LC+TPM+ A F++ + R N + + PED PL+VQF +N+ +
Sbjct: 28 SELAWRLLSRRHGAQLCYTPMLHAQVFLRDANYRRENLYGEACPEDRPLIVQFCANDPEV 87
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 88 FVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL 122
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 188 (71.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 76/316 (24%), Positives = 137/316 (43%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L + + GH V + ++ Q+ASG+ D +++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 258 EDSSVVISGSQDNTVMMW--DVKSRSH----HPIQVRCLNEALKEARDSIT-SVHSLVKS 310
++ SGS+D TV +W +VK S H VR ++ + + +T S VK
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFC-SDGQSFVTASDDKTVKV 129
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS-IHNS 369
H K +F+ +++N + L+V + ++ D + +H+
Sbjct: 130 WATHRQ-----KFLFSLS-QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSY 183
Query: 370 CFQALKEARDSITSV--HVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FT 425
C E +T V H S I A +D ++ +D+RT L+ Y + V+ F
Sbjct: 184 C-----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFH 238
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKI 484
++T S+D L++ D G LL GH+ + S+ + F G SD ++
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF---SRTGEYFASGGSDEQV 295
Query: 485 YKWQ----LVDSSQIS 496
W+ +VD +++
Sbjct: 296 MVWKSNFDIVDHGEVT 311
Score = 171 (65.3 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 40/122 (32%), Positives = 62/122 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG +T DK +K+W +R L + H + V A + D I S + DK+V
Sbjct: 111 FCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291
LW+ ++ + V + EH VT V F+ + + + DNTV +WDV R+H +Q L+
Sbjct: 171 LWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV--RTHRLLQHYQLH 228
Query: 292 EA 293
A
Sbjct: 229 SA 230
Score = 135 (52.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 29/104 (27%), Positives = 47/104 (45%)
Query: 178 YCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT 236
+ L GS DK +++W P + H V D + + DK+V +W
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 133
Query: 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + +H + V C KF+ D +++S S D TV +WD SR
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSR 177
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F DG ++ DK +KLW+ + +Y H V + IA+ D +V
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 211
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+W+V T + ++ ++ H++ V + F+ + +I+ S D+T+ + D+
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 258
Score = 118 (46.6 bits), Expect = 0.00065, P = 0.00065
Identities = 61/269 (22%), Positives = 109/269 (40%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D + +W+ + GH V + +ASG+ DK+V +W
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SRSHHPIQVRCLNE 292
+R H + V V F D ++ S D TV +W S S H VRC
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKF 153
Query: 293 ALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352
+ + R +++ K+ K L + + V ++ C++ G ++ V +
Sbjct: 154 S-PDGRLIVSASDD--KTVK--LWDKSSRECVHSY-CEH-GGFVTYVDFHPSGTCIAAAG 206
Query: 353 LGST-QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV 411
+ +T ++ DV + +Q A + + S H S + ++TAS D ++ D+ G L+
Sbjct: 207 MDNTVKVWDVRTHRLLQH-YQLHSAAVNGL-SFHPSGNYLITASSDSTLKILDLMEGRLL 264
Query: 412 TDYVGE--PIVDACFTRDCQCILTCSTDE 438
G P F+R + + +DE
Sbjct: 265 YTLHGHQGPATTVAFSRTGEYFASGGSDE 293
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 165 (63.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 40/118 (33%), Positives = 66/118 (55%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE----VNDATAA-C---DSSQIA 222
RF DG Y +T D I++WN + K A + ++DA C D+ +A
Sbjct: 221 RFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 223 SGASDKSVILWEVTTGQPVRRW-REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+GA D + +W++ +GQ +RR+ R H+ VTC+ F++DSS ++S S D T+ + +KS
Sbjct: 281 TGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKS 338
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-GHAHEVNDATAACDSSQIASGASDKSV 230
F D T D KIK+W L+ + H+ V + + DSSQI S + D+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ + +G+ ++ +R H+S V F +D +IS S D TV +W++K+
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Score = 114 (45.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 388 DHEIL-TASLDCRIRRYDIRTGNLVTDYV---GEPIVDACFTRDCQCILTCSTDECLRLF 443
D E+L T + D +I+ + I++G + + + + F++D IL+ S D+ +R+
Sbjct: 275 DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIH 334
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 503
+G+ L+E++GH S F E I SSDG + W + +++ S S+G
Sbjct: 335 GLKSGKTLKEFRGHSS--FVNEATFTQDGHYIISASSDGTVKIWNM-KTTECSNTFKSLG 391
Query: 504 KAV-----VNSLCSHPTRKHIMSACGNN 526
VNS+ P C +
Sbjct: 392 STAGTDITVNSVILLPKNPEHFVVCNRS 419
Score = 87 (35.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/87 (24%), Positives = 47/87 (54%)
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK---------VT 252
+G +H V A + D + +G+ D + +W TTG+ +R+ ++ ++ V
Sbjct: 211 FGQKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGK-IRKDLKYQAQDNFMMMDDAVL 268
Query: 253 CVKFNEDSSVVISGSQDNTVMMWDVKS 279
C+ F+ D+ ++ +G+QD + +W ++S
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS 295
Score = 71 (30.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 42/186 (22%), Positives = 80/186 (43%)
Query: 364 ISIHN-SCFQALKEARDSITSVH----VSD-HEILTASLDCRIRRYDIRTGNLVTDY--- 414
I IH + LKE R + V+ D H I++AS D ++ ++++T +
Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
Query: 415 ---VGEPI-VDACFT--RDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SGDFRIEC 466
G I V++ ++ + + C+ + + + G+++ + K GDF + C
Sbjct: 391 GSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIVRSFSSGKREGGDF-VCC 448
Query: 467 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGN 525
L + I+C D +Y + V TL +H K V+ + HP + I + +
Sbjct: 449 ALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHE--KDVIG-IAHHPHQNLIATYSED 505
Query: 526 NV-KLW 530
+ KLW
Sbjct: 506 GLLKLW 511
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 165 (63.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 40/118 (33%), Positives = 66/118 (55%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE----VNDATAA-C---DSSQIA 222
RF DG Y +T D I++WN + K A + ++DA C D+ +A
Sbjct: 221 RFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 223 SGASDKSVILWEVTTGQPVRRW-REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+GA D + +W++ +GQ +RR+ R H+ VTC+ F++DSS ++S S D T+ + +KS
Sbjct: 281 TGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKS 338
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-GHAHEVNDATAACDSSQIASGASDKSV 230
F D T D KIK+W L+ + H+ V + + DSSQI S + D+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ + +G+ ++ +R H+S V F +D +IS S D TV +W++K+
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Score = 114 (45.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 388 DHEIL-TASLDCRIRRYDIRTGNLVTDYV---GEPIVDACFTRDCQCILTCSTDECLRLF 443
D E+L T + D +I+ + I++G + + + + F++D IL+ S D+ +R+
Sbjct: 275 DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIH 334
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 503
+G+ L+E++GH S F E I SSDG + W + +++ S S+G
Sbjct: 335 GLKSGKTLKEFRGHSS--FVNEATFTQDGHYIISASSDGTVKIWNM-KTTECSNTFKSLG 391
Query: 504 KAV-----VNSLCSHPTRKHIMSACGNN 526
VNS+ P C +
Sbjct: 392 STAGTDITVNSVILLPKNPEHFVVCNRS 419
Score = 87 (35.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/87 (24%), Positives = 47/87 (54%)
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK---------VT 252
+G +H V A + D + +G+ D + +W TTG+ +R+ ++ ++ V
Sbjct: 211 FGQKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGK-IRKDLKYQAQDNFMMMDDAVL 268
Query: 253 CVKFNEDSSVVISGSQDNTVMMWDVKS 279
C+ F+ D+ ++ +G+QD + +W ++S
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS 295
Score = 71 (30.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 42/186 (22%), Positives = 80/186 (43%)
Query: 364 ISIHN-SCFQALKEARDSITSVH----VSD-HEILTASLDCRIRRYDIRTGNLVTDY--- 414
I IH + LKE R + V+ D H I++AS D ++ ++++T +
Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
Query: 415 ---VGEPI-VDACFT--RDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SGDFRIEC 466
G I V++ ++ + + C+ + + + G+++ + K GDF + C
Sbjct: 391 GSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIVRSFSSGKREGGDF-VCC 448
Query: 467 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGN 525
L + I+C D +Y + V TL +H K V+ + HP + I + +
Sbjct: 449 ALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHE--KDVIG-IAHHPHQNLIATYSED 505
Query: 526 NV-KLW 530
+ KLW
Sbjct: 506 GLLKLW 511
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 165 (63.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 40/118 (33%), Positives = 66/118 (55%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE----VNDATAA-C---DSSQIA 222
RF DG Y +T D I++WN + K A + ++DA C D+ +A
Sbjct: 221 RFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 223 SGASDKSVILWEVTTGQPVRRW-REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+GA D + +W++ +GQ +RR+ R H+ VTC+ F++DSS ++S S D T+ + +KS
Sbjct: 281 TGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKS 338
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-GHAHEVNDATAACDSSQIASGASDKSV 230
F D T D KIK+W L+ + H+ V + + DSSQI S + D+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ + +G+ ++ +R H+S V F +D +IS S D TV +W++K+
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Score = 114 (45.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 388 DHEIL-TASLDCRIRRYDIRTGNLVTDYV---GEPIVDACFTRDCQCILTCSTDECLRLF 443
D E+L T + D +I+ + I++G + + + + F++D IL+ S D+ +R+
Sbjct: 275 DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIH 334
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 503
+G+ L+E++GH S F E I SSDG + W + +++ S S+G
Sbjct: 335 GLKSGKTLKEFRGHSS--FVNEATFTQDGHYIISASSDGTVKIWNM-KTTECSNTFKSLG 391
Query: 504 KAV-----VNSLCSHPTRKHIMSACGNN 526
VNS+ P C +
Sbjct: 392 STAGTDITVNSVILLPKNPEHFVVCNRS 419
Score = 87 (35.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/87 (24%), Positives = 47/87 (54%)
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK---------VT 252
+G +H V A + D + +G+ D + +W TTG+ +R+ ++ ++ V
Sbjct: 211 FGQKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGK-IRKDLKYQAQDNFMMMDDAVL 268
Query: 253 CVKFNEDSSVVISGSQDNTVMMWDVKS 279
C+ F+ D+ ++ +G+QD + +W ++S
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS 295
Score = 71 (30.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 42/186 (22%), Positives = 80/186 (43%)
Query: 364 ISIHN-SCFQALKEARDSITSVH----VSD-HEILTASLDCRIRRYDIRTGNLVTDY--- 414
I IH + LKE R + V+ D H I++AS D ++ ++++T +
Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
Query: 415 ---VGEPI-VDACFT--RDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SGDFRIEC 466
G I V++ ++ + + C+ + + + G+++ + K GDF + C
Sbjct: 391 GSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIVRSFSSGKREGGDF-VCC 448
Query: 467 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGN 525
L + I+C D +Y + V TL +H K V+ + HP + I + +
Sbjct: 449 ALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHE--KDVIG-IAHHPHQNLIATYSED 505
Query: 526 NV-KLW 530
+ KLW
Sbjct: 506 GLLKLW 511
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 165 (63.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 40/118 (33%), Positives = 66/118 (55%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE----VNDATAA-C---DSSQIA 222
RF DG Y +T D I++WN + K A + ++DA C D+ +A
Sbjct: 221 RFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA 280
Query: 223 SGASDKSVILWEVTTGQPVRRW-REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+GA D + +W++ +GQ +RR+ R H+ VTC+ F++DSS ++S S D T+ + +KS
Sbjct: 281 TGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKS 338
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-GHAHEVNDATAACDSSQIASGASDKSV 230
F D T D KIK+W L+ + H+ V + + DSSQI S + D+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ + +G+ ++ +R H+S V F +D +IS S D TV +W++K+
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Score = 114 (45.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 388 DHEIL-TASLDCRIRRYDIRTGNLVTDYV---GEPIVDACFTRDCQCILTCSTDECLRLF 443
D E+L T + D +I+ + I++G + + + + F++D IL+ S D+ +R+
Sbjct: 275 DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIH 334
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 503
+G+ L+E++GH S F E I SSDG + W + +++ S S+G
Sbjct: 335 GLKSGKTLKEFRGHSS--FVNEATFTQDGHYIISASSDGTVKIWNM-KTTECSNTFKSLG 391
Query: 504 KAV-----VNSLCSHPTRKHIMSACGNN 526
VNS+ P C +
Sbjct: 392 STAGTDITVNSVILLPKNPEHFVVCNRS 419
Score = 87 (35.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/87 (24%), Positives = 47/87 (54%)
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK---------VT 252
+G +H V A + D + +G+ D + +W TTG+ +R+ ++ ++ V
Sbjct: 211 FGQKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGK-IRKDLKYQAQDNFMMMDDAVL 268
Query: 253 CVKFNEDSSVVISGSQDNTVMMWDVKS 279
C+ F+ D+ ++ +G+QD + +W ++S
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS 295
Score = 71 (30.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 42/186 (22%), Positives = 80/186 (43%)
Query: 364 ISIHN-SCFQALKEARDSITSVH----VSD-HEILTASLDCRIRRYDIRTGNLVTDY--- 414
I IH + LKE R + V+ D H I++AS D ++ ++++T +
Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
Query: 415 ---VGEPI-VDACFT--RDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SGDFRIEC 466
G I V++ ++ + + C+ + + + G+++ + K GDF + C
Sbjct: 391 GSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIVRSFSSGKREGGDF-VCC 448
Query: 467 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGN 525
L + I+C D +Y + V TL +H K V+ + HP + I + +
Sbjct: 449 ALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHE--KDVIG-IAHHPHQNLIATYSED 505
Query: 526 NV-KLW 530
+ KLW
Sbjct: 506 GLLKLW 511
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 185 (70.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 75/304 (24%), Positives = 131/304 (43%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L + + GH V + ++ +ASG+ D ++++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 258 EDSSVVISGSQDNTVMMW--DVKSRSH----HPIQVRCLNEALKEARDSIT-SVHSLVKS 310
++ SGS+D TV +W +VK S H VR ++ + + +T S VK
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFC-SDGQLLVTASDDKTVKV 129
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS-IHNS 369
H + +F+ +++N + L+V + ++ D T +H+
Sbjct: 130 WSTHRQ-----RFLFSLT-QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 183
Query: 370 CFQALKEARDSITSV--HVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FT 425
C E +T V H S I A +D ++ +D RT LV Y + V+A F
Sbjct: 184 C-----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFH 238
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKI 484
++T S+D L++ D G LL GH+ + S+ + F G SD ++
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF---SRTGEYFASGGSDEQV 295
Query: 485 YKWQ 488
W+
Sbjct: 296 MVWK 299
Score = 178 (67.7 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 43/142 (30%), Positives = 71/142 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG +T DK +K+W+ +R L + H + V A + D I S + DK+V
Sbjct: 111 FCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291
LW+ T+ + V + EH VT V F+ + + + DNTV +WD +R+H +Q L+
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD--TRTHRLVQHYQLH 228
Query: 292 EALKEARDSITSVHSLVKSTKN 313
A A S + L+ ++ +
Sbjct: 229 SAAVNALSFHPSGNYLITASSD 250
Score = 135 (52.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 178 YCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT 236
+ L GS DK +++W P + H V D + + + DK+V +W
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTH 133
Query: 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + +H + V C KF+ D +++S S D TV +WD SR
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
Score = 125 (49.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 60/269 (22%), Positives = 110/269 (40%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D + +W+ + GH V + +ASG+ DK+V +W
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SRSHHPIQVRCLNE 292
+R H + V V F D ++++ S D TV +W S + H VRC
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKF 153
Query: 293 ALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352
+ + R +++ K+ K L + + V ++ C++ G ++ V +
Sbjct: 154 S-PDGRLIVSASDD--KTVK--LWDKTSRECVHSY-CEH-GGFVTYVDFHPSGTCIAAAG 206
Query: 353 LGST-QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV 411
+ +T ++ D + +Q L A + S H S + ++TAS D ++ D+ G L+
Sbjct: 207 MDNTVKVWDTRTHRLVQH-YQ-LHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLL 264
Query: 412 TDYVGE--PIVDACFTRDCQCILTCSTDE 438
G P F+R + + +DE
Sbjct: 265 YTLHGHQGPATTVAFSRTGEYFASGGSDE 293
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 30/128 (23%), Positives = 61/128 (47%)
Query: 156 TVNRELFVLSGLMH------TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV 209
+ +R+ F+ S H +F DG ++ DK +KLW+ + +Y H V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 210 NDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 269
+ IA+ D +V +W+ T + V+ ++ H++ V + F+ + +I+ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSD 250
Query: 270 NTVMMWDV 277
+T+ + D+
Sbjct: 251 STLKILDL 258
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 131 (51.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 29/98 (29%), Positives = 55/98 (56%)
Query: 391 ILTASLDCRIRRYDIRTGNLV---TDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKAT 447
+ +AS D +R +D+ G+ + T + EP+ F+ D + + + S D+C+ ++ T
Sbjct: 600 LASASFDSTVRLWDVERGSCIHTLTKHT-EPVYSVAFSPDGKHLASGSFDKCVHIWSTQT 658
Query: 448 GELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
G+L+ YKG G F E C +SK +++ +SDG ++
Sbjct: 659 GQLVHSYKG-TGGIF--EVCWNSKGTKVGASASDGSVF 693
Score = 110 (43.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 24/112 (21%), Positives = 55/112 (49%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+Y L+ G DK +W+ + + H+ D + + AS ++D+ + + +
Sbjct: 463 GNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQA-FASCSTDQRIHVCRL 521
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSRSHHPIQ 286
+P++ ++ H ++V +K+ ++ S S D T+ +W + + R H +Q
Sbjct: 522 GVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQ 573
Score = 93 (37.8 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 216 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
CD S +A+G+ D +W+ T G+ +H + +K+N+ + ++S D T ++W
Sbjct: 420 CDGSLLATGSYDGYARIWK-TDGRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIW 478
Query: 276 DVKS 279
D +
Sbjct: 479 DAST 482
Score = 81 (33.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/154 (22%), Positives = 63/154 (40%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYV--GEPIVDACFTRDCQCILTCSTDECLRLFDKATG 448
IL+A +D +D TG + P +D + + Q +CSTD+ + +
Sbjct: 466 ILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTN-QAFASCSTDQRIHVCRLGVN 524
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLV------DSSQISTLIHS 501
E ++ +KGH + I+ C Q+ SD K W + D S I++
Sbjct: 525 EPIKTFKGHTNEVNAIKWC---PQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYT 581
Query: 502 VGKAVVNSLCSHPTRKHIMSACG--NNVKLWTAE 533
+ + ++P I+++ + V+LW E
Sbjct: 582 IKWSPTGPGTNNPNTNLILASASFDSTVRLWDVE 615
Score = 64 (27.6 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 245 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQV---RCLNEALKE--ARD 299
R H S+V +N ++ SGS D+T +WD+ + + Q+ C+ + E +
Sbjct: 352 RGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNK 411
Query: 300 SITSV 304
+TS+
Sbjct: 412 DVTSL 416
Score = 59 (25.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 27/98 (27%), Positives = 43/98 (43%)
Query: 184 SDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRR 243
S+ I WNP R+LL G D+TA A+ S++ V+ + G
Sbjct: 356 SEVFICAWNPSRDLLASGSG-------DSTARIWDMSDANTNSNQLVLRHCIQKGGA--- 405
Query: 244 WREHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
++K VT + +N D S++ +GS D +W R
Sbjct: 406 -EVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGR 442
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 187 (70.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 75/304 (24%), Positives = 131/304 (43%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L + + GH V + ++ +ASG+ D ++++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 258 EDSSVVISGSQDNTVMMW--DVKSRSH----HPIQVRCLNEALKEARDSIT-SVHSLVKS 310
++ SGS+D TV +W +VK S H VR ++ + + +T S VK
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFC-SDGQSLVTASDDKTVKV 129
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS-IHNS 369
H + +F+ +++N + L+V + ++ D T IH+
Sbjct: 130 WSTHRQ-----RFLFSLT-QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSY 183
Query: 370 CFQALKEARDSITSV--HVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FT 425
C E +T V H S I A +D ++ +D RT L+ Y + V+A F
Sbjct: 184 C-----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFH 238
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKI 484
++T S+D L++ D G LL GH+ + S+ + F G SD ++
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF---SRTGEYFASGGSDEQV 295
Query: 485 YKWQ 488
W+
Sbjct: 296 MVWK 299
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 42/142 (29%), Positives = 71/142 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG +T DK +K+W+ +R L + H + V A + D I S + DK+V
Sbjct: 111 FCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291
LW+ T+ + + + EH VT V F+ + + + DNTV +WD +R+H +Q L+
Sbjct: 171 LWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD--ARTHRLLQHYQLH 228
Query: 292 EALKEARDSITSVHSLVKSTKN 313
A A S + L+ ++ +
Sbjct: 229 SAAVNALSFHPSGNYLITASSD 250
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 178 YCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT 236
+ L GS DK +++W P + H V D + + + DK+V +W
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + +H + V C KF+ D +++S S D TV +WD SR
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 29/128 (22%), Positives = 61/128 (47%)
Query: 156 TVNRELFVLSGLMH------TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV 209
+ +R+ F+ S H +F DG ++ DK +KLW+ + +Y H V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFV 190
Query: 210 NDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 269
+ IA+ D +V +W+ T + ++ ++ H++ V + F+ + +I+ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSD 250
Query: 270 NTVMMWDV 277
+T+ + D+
Sbjct: 251 STLKILDL 258
>WB|WBGene00009452 [details] [associations]
symbol:F36A2.2 species:6239 "Caenorhabditis elegans"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:Z81077 PIR:T21830
RefSeq:NP_492379.1 UniGene:Cel.26704 ProteinModelPortal:Q9XVN8
SMR:Q9XVN8 STRING:Q9XVN8 PaxDb:Q9XVN8 EnsemblMetazoa:F36A2.2
GeneID:185334 KEGG:cel:CELE_F36A2.2 UCSC:F36A2.2 CTD:185334
WormBase:F36A2.2 InParanoid:Q9XVN8 OMA:YLFASQP NextBio:927896
Uniprot:Q9XVN8
Length = 527
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 46/114 (40%), Positives = 57/114 (50%)
Query: 5 NCRFNRSTLLKN--LKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNN 62
N RF + TL K + S+L FR R + L FTPMI A F+ R N
Sbjct: 60 NLRFWKETLENQRITKVLAPMVDQSELAFRMFTRKYGAQLTFTPMIHAHLFVNDGTYRRN 119
Query: 63 EFSTSPEDTPLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYG 116
+ D PLVVQF +N D F+ A + V C+GVDLN GCPQ A + YG
Sbjct: 120 SLALVKADRPLVVQFCANKVDTFLAACRLVEDVCDGVDLNLGCPQMVAKRGRYG 173
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 194 (73.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 87/381 (22%), Positives = 164/381 (43%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI--ASGASDKS 229
F D + TC DKK+K+WN L++ Y H+ +VN +S+ + A+G++D
Sbjct: 667 FSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYF 726
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP-IQVR 288
+ LW++ + H + V+ +F+ D V+ S S D T+ +WDVKS + I V+
Sbjct: 727 LKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKSINVK 786
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLLTK-LVFAFRCKYLNGLLSGVLMSTQHLM 347
+E ++ + + + + + K VF F + +GLL+ + M +
Sbjct: 787 QFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDI-HSSGLLAEMHMGHHSAV 845
Query: 348 VLLDFLGSTQIGDVTPISIHN----SCFQALKEA--RDSITSVHV-----SDHEILTASL 396
DF + V +S + S LK A R ++ VH LT+S
Sbjct: 846 QYCDFSPHNHLA-VVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSD 904
Query: 397 DCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 456
D IR ++ + + V + +D F + +L L+L + TG++ +Y
Sbjct: 905 DQTIRLWETKKVCKNSATVLKQEIDVVFQENEVTVLAVDNIRRLQLINGNTGQI--DYLT 962
Query: 457 HKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 515
+ ++ CC S Q G DG I +L+++ + + K V +
Sbjct: 963 ----EAQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQS--RNGHKTTVRHIQFTAD 1016
Query: 516 RKHIMSACGNN-VKLWTAEED 535
K ++S+ ++ V++W + +
Sbjct: 1017 GKTLISSSDDSAVQIWNWQSE 1037
Score = 152 (58.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/111 (30%), Positives = 56/111 (50%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG +CG+DK ++++ L H EV + D IA+ + DK
Sbjct: 622 HACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDKFIATCSVDK 681
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV 277
V +W TG+ VR + EH+ +V C F +S+ ++ +GS D + +WD+
Sbjct: 682 KVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDL 732
Score = 136 (52.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 417 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 476
+ + ACF+ D Q I +C D+ L++F TGE L E K H+ + CC S D +
Sbjct: 618 DAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHED---EVLCCAFSADDKFI 674
Query: 477 CGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 530
S D K+ W + + I+ VN C H T H++ A G+N +KLW
Sbjct: 675 ATCSVDKKVKIWNSMTGELVR--IYDEHSEQVN--CCHFTNNSNHLLLATGSNDYFLKLW 730
Query: 531 TAEED 535
++
Sbjct: 731 DLNQE 735
Score = 123 (48.4 bits), Expect = 0.00083, P = 0.00083
Identities = 79/372 (21%), Positives = 169/372 (45%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRN-LLLKTYGGHAHEVNDATAACDSS---QIASGA-SDKS 229
DG+ + +K + L++ + + LL + + GH H A CD S +A A S
Sbjct: 811 DGAKIMVAAKNK-VFLFDIHSSGLLAEMHMGH-HS---AVQYCDFSPHNHLAVVALSQYC 865
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--RSHHPIQV 287
V LW + +G V R H S V CV F+ D S ++ S D T+ +W+ K ++ +
Sbjct: 866 VELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLK 925
Query: 288 RCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLM 347
+ ++ +E ++ +V ++ + L NG ++ YL + HL
Sbjct: 926 QEIDVVFQENEVTVLAVDNI---RRLQLINGNTGQI------DYLTEAQVSCCCLSPHLQ 976
Query: 348 VLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH-VSDHE-ILTASLDCRIRRYDI 405
L F G + + ++N FQ+ + ++ + +D + ++++S D ++ ++
Sbjct: 977 YLA-FGGEDGAIQILEL-LNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNW 1034
Query: 406 RTGN-LVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 464
++ + E + D ++ + +L+ S D +++++ T + +++ H+ D +
Sbjct: 1035 QSEDPFFLQAHQETVKDFRLLKNSR-LLSWSFDGTVKVWNIITRRIEKDFVCHQ--DTVL 1091
Query: 465 ECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSV-G-KAVVNSLCSHPTRKHIMS 521
C + S D+ F +S K K W S ++ + +H + G K V CS + + +
Sbjct: 1092 SCDISS-DATKFSSTSADKTAKIW----SFELLSPLHELRGHKGCVR--CSSFSVNNTLL 1144
Query: 522 ACGNN---VKLW 530
A G++ +++W
Sbjct: 1145 ATGDDNGEIRIW 1156
Score = 101 (40.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
+NL H V A + D +IAS +DK++ +++ TG+ + + H +V C
Sbjct: 606 KNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCC 665
Query: 255 KFNEDSSVVISGSQDNTVMMWD------VKSRSHHPIQVRC 289
F+ D + + S D V +W+ V+ H QV C
Sbjct: 666 AFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNC 706
Score = 84 (34.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 37/156 (23%), Positives = 69/156 (44%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYV-GEPIVDAC-FTRDCQCILTCSTDECLRLF 443
+ + +L+ S D ++ ++I T + D+V + V +C + D + S D+ +++
Sbjct: 1055 LKNSRLLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIW 1114
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 502
L E +GHK + C S ++ + G +G+I W V + ++ L +
Sbjct: 1115 SFELLSPLHELRGHKGC---VRCSSFSVNNTLLATGDDNGEIRIWN-VSNGELLHLCAPI 1170
Query: 503 ----GKAV----VNSLCSHPTRKHIMSACGNNVKLW 530
G A V LC P K ++SA G +K W
Sbjct: 1171 SVEEGAATHGGWVTDLCFSPDTKMLVSA-GGYLKWW 1205
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 38/109 (34%), Positives = 61/109 (55%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G + T +DK +K+WN +T GH VND + DS I + + DK++
Sbjct: 86 KFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTL 145
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
++EV T + + + H + V C FN SS+V+SGS D +V +WDV++
Sbjct: 146 KIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRT 194
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 75/301 (24%), Positives = 128/301 (42%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHS 306
H ++ VKF+ + + S D TV +W++ S R L D S S
Sbjct: 78 HTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCE----RTLTGHKLGVNDFAWSADS 133
Query: 307 LVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMST----QHLMVLLDFLGSTQIGDVT 362
T + + ++ K L G + V L+V F S +I DV
Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVR 193
Query: 363 PISIHNSCFQALKEARDSITSVHVS-DHEILTA-SLDCRIRRYDIRTGNLVTDYVGE--- 417
C + L D +++V + D ++T+ S D +R +D G V V +
Sbjct: 194 T----GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENP 249
Query: 418 PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IF 476
P+ F+ + + IL+ + D L+L+D G+ L++Y+GH++ + I + I
Sbjct: 250 PVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWII 309
Query: 477 CGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSAC---GNNVKLWTA 532
GS D KIY W L + +L H+ +AV+ S C HP + I S N +++W +
Sbjct: 310 SGSEDCKIYVWNLQTKEVVQSLEGHT--QAVIASDC-HPMQNMIASGALEPDNTIRIWRS 366
Query: 533 E 533
+
Sbjct: 367 D 367
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/111 (33%), Positives = 56/111 (50%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ + D +T DK +K++ + KT GH + V SS + SG+
Sbjct: 123 GVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGS 182
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
D+SV +W+V TG V+ H+ V+ V FN D S++ SGS D V +WD
Sbjct: 183 FDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 135 (52.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 30/102 (29%), Positives = 54/102 (52%)
Query: 177 SYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
S + GS D+ +++W+ + +KT H+ V+ + D S I SG+ D V +W+
Sbjct: 175 SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDT 234
Query: 236 TTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWD 276
GQ V+ + + V VKF+ + ++S + DNT+ +WD
Sbjct: 235 ANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 55/197 (27%), Positives = 85/197 (43%)
Query: 352 FLGSTQIGDVTPISIHN----SCFQALKEARDSITSVHVS-DHE-ILTASLDCRIRRYDI 405
FLG T D T + I N SC + L + + S D + I+TAS D ++ Y++
Sbjct: 93 FLG-TSSADKT-VKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEV 150
Query: 406 RTGNLVTDYVGEP-IVDAC-FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFR 463
T + G V C F +++ S DE +R++D TG ++ H
Sbjct: 151 PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSA 210
Query: 464 IECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA- 522
+ D S I GS DG + W + + TL+ V S P K+I+S+
Sbjct: 211 VSFNRDG--SLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFS-PNGKYILSSN 267
Query: 523 CGNNVKLWTAEEDYGQG 539
N +KLW D+G+G
Sbjct: 268 LDNTLKLW----DFGKG 280
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/134 (29%), Positives = 73/134 (54%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
W+ Y+PL + L+ + TRF + +Y T +D+ ++LW+ ++ + GH
Sbjct: 612 WATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 669
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
++ T + + +A+GA+D V+LW++ G V + H V ++F+ D ++ SG
Sbjct: 670 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 729
Query: 267 SQDNTVMMWD-VKS 279
S DNTV +WD VK+
Sbjct: 730 SMDNTVRLWDAVKA 743
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 161 LFVLSGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 219
L+ SG ++ F D +Y L+ D ++LW+ L Y GH + V D +
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 220 QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
SG D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Score = 157 (60.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
T+F G Y ++ G D+ +LW L+ + GH +VN +S+ +A+G++D++
Sbjct: 591 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 650
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V LW+V G VR + H + + F+ + + +G+ D V++WD+
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 113 (44.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 382 TSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDEC 439
T H + + + T S D +R +D+ GN V + G PI F+ + + + T +TD
Sbjct: 633 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 692
Query: 440 LRLFDKATGELLEEYKGHKSGDFRIECCLD-SKDSQIFC-GSSDGKIYKWQLV 490
+ L+D G ++ E KGH C L S+D +I GS D + W V
Sbjct: 693 VLLWDIGHGLMVGELKGHTD----TVCSLRFSRDGEILASGSMDNTVRLWDAV 741
Score = 80 (33.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
LK GH+ V A+ + D + + S + D +V LW + T + ++ H V +F+
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 259 DSSVVISGSQDNTVMMWDVKSRSHH-PIQV 287
+SG D +W + H+ P+++
Sbjct: 596 YGYYFVSGGHDRVARLW---ATDHYQPLRI 622
Score = 67 (28.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 215 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 274
A D S I + D + + T ++ H+ V F+ D + ++S S+D TV +
Sbjct: 510 AADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 569
Query: 275 WDVKS 279
W +++
Sbjct: 570 WSLQT 574
Score = 55 (24.4 bits), Expect = 0.00078, Sum P(2) = 0.00077
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
DSS IA G +D +V +W VT P K+ VK D S++ S D + D
Sbjct: 481 DSSLIAGGFADSTVRVWSVT---P--------KKLRSVKQAADLSLIDKESDDVLERIMD 529
Query: 277 VKSRS 281
K+ S
Sbjct: 530 EKTAS 534
>RGD|708389 [details] [associations]
symbol:Pp3111 "PP3111 protein" species:10116 "Rattus norvegicus"
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 RGD:708389 Gene3D:3.20.20.70
GO:GO:0050660 HOVERGEN:HBG061241 KO:K05542 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 EMBL:AF508021 EMBL:AY327509
EMBL:AY327510 IPI:IPI00203718 RefSeq:NP_742015.1 UniGene:Rn.179335
ProteinModelPortal:Q8K582 PRIDE:Q8K582 GeneID:246185
KEGG:rno:246185 CTD:246185 NextBio:623466 Genevestigator:Q8K582
Uniprot:Q8K582
Length = 438
Score = 190 (71.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STSPEDTPLVVQFASNNHDD 84
S+L +R L R H LC+TPM+ A F++ + R PED PL+VQF +N+ +
Sbjct: 28 SELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDVCPEDRPLIVQFCANDPEV 87
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 88 FVQAALLAQDYCDAIDLNLGCPQMIAKRGRYGAFL 122
Score = 39 (18.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 374 LKEARDSITSVHVSDHEILTASLDCRIR 401
L+E D + + + HE L+ + C+IR
Sbjct: 122 LQEEWDLLQRMILLAHERLSVPVTCKIR 149
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/134 (29%), Positives = 73/134 (54%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
W+ Y+PL + L+ + TRF + +Y T +D+ ++LW+ ++ + GH
Sbjct: 613 WATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 670
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
++ T + + +A+GA+D V+LW++ G V + H V ++F+ D ++ SG
Sbjct: 671 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 730
Query: 267 SQDNTVMMWD-VKS 279
S DNTV +WD VK+
Sbjct: 731 SMDNTVRLWDAVKA 744
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 161 LFVLSGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 219
L+ SG ++ F D +Y L+ D ++LW+ L Y GH + V D +
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 220 QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
SG D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 657
Score = 157 (60.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
T+F G Y ++ G D+ +LW L+ + GH +VN +S+ +A+G++D++
Sbjct: 592 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 651
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V LW+V G VR + H + + F+ + + +G+ D V++WD+
Sbjct: 652 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 113 (44.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 382 TSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDEC 439
T H + + + T S D +R +D+ GN V + G PI F+ + + + T +TD
Sbjct: 634 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 693
Query: 440 LRLFDKATGELLEEYKGHKSGDFRIECCLD-SKDSQIFC-GSSDGKIYKWQLV 490
+ L+D G ++ E KGH C L S+D +I GS D + W V
Sbjct: 694 VLLWDIGHGLMVGELKGHTD----TVCSLRFSRDGEILASGSMDNTVRLWDAV 742
Score = 80 (33.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
LK GH+ V A+ + D + + S + D +V LW + T + ++ H V +F+
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 259 DSSVVISGSQDNTVMMWDVKSRSHH-PIQV 287
+SG D +W + H+ P+++
Sbjct: 597 YGYYFVSGGHDRVARLW---ATDHYQPLRI 623
Score = 67 (28.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 215 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 274
A D S I + D + + T ++ H+ V F+ D + ++S S+D TV +
Sbjct: 511 AADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 570
Query: 275 WDVKS 279
W +++
Sbjct: 571 WSLQT 575
Score = 55 (24.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
DSS IA G +D +V +W VT P K+ VK D S++ S D + D
Sbjct: 482 DSSLIAGGFADSTVRVWSVT---P--------KKLRSVKQAADLSLIDKESDDVLERIMD 530
Query: 277 VKSRS 281
K+ S
Sbjct: 531 EKTAS 535
>UNIPROTKB|E2R9L8 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 CTD:64118 KO:K05542 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AAEX03006160
EMBL:AAEX03006161 RefSeq:XP_848227.1 ProteinModelPortal:E2R9L8
Ensembl:ENSCAFT00000009615 GeneID:475927 KEGG:cfa:475927
NextBio:20851671 Uniprot:E2R9L8
Length = 475
Score = 190 (71.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STSPEDTPLVVQFASNNHDD 84
S+L +R L R H LC+TPM+ A F++ + R PED PL+VQF +N+ +
Sbjct: 28 SELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPEDRPLIVQFCANDPEV 87
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 88 FVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL 122
Score = 40 (19.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 367 HNSCFQALKEARDSITSVHVSDHEILTASLDCRIR 401
H F L+E D + + + HE L+ + C+IR
Sbjct: 117 HYGAF--LQEEWDLLQRMILLAHEKLSVPVTCKIR 149
>MGI|MGI:1915980 [details] [associations]
symbol:Dus1l "dihydrouridine synthase 1-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
MGI:MGI:1915980 Gene3D:3.20.20.70 GO:GO:0050660 CTD:64118
eggNOG:COG0042 HOVERGEN:HBG061241 KO:K05542 OrthoDB:EOG4SN1NJ
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 EMBL:AK004041
EMBL:AK088243 EMBL:BC019480 IPI:IPI00224714 RefSeq:NP_081100.2
UniGene:Mm.180622 ProteinModelPortal:Q8C2P3 SMR:Q8C2P3
STRING:Q8C2P3 PRIDE:Q8C2P3 Ensembl:ENSMUST00000167023 GeneID:68730
KEGG:mmu:68730 UCSC:uc007mur.1 GeneTree:ENSGT00550000075089
InParanoid:Q8C2P3 NextBio:327790 Bgee:Q8C2P3 CleanEx:MM_DUS1L
Genevestigator:Q8C2P3 GermOnline:ENSMUSG00000025155 Uniprot:Q8C2P3
Length = 475
Score = 190 (71.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STSPEDTPLVVQFASNNHDD 84
S+L +R L R H LC+TPM+ A F++ + R PED PL+VQF +N+ +
Sbjct: 28 SELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDVCPEDRPLIVQFCANDPEV 87
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 88 FVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL 122
Score = 40 (19.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 367 HNSCFQALKEARDSITSVHVSDHEILTASLDCRIR 401
H F L+E D + + + HE L+ + C+IR
Sbjct: 117 HYGAF--LQEEWDLLQRMILLAHERLSVPVTCKIR 149
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 174 (66.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 39/126 (30%), Positives = 58/126 (46%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + T DK IK+W+ YR L + H H V A + D I S + DK++
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSRSHHPIQ-- 286
+W+ T Q V + + V FN + + S D TV +WDV K H+ +
Sbjct: 170 IWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG 229
Query: 287 -VRCLN 291
V C++
Sbjct: 230 GVNCIS 235
Score = 148 (57.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 48/203 (23%), Positives = 91/203 (44%)
Query: 82 HDDFVRATQYVAPHCNGV-DLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRIL 140
H D V + Q+ +PH N + + R I + G K T P+ + L
Sbjct: 59 HKDVVTSVQF-SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 117
Query: 141 YELPKEWSIRVYRPLTVNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLWNPY 194
++ SI+V+ ++ R+ F+ S HT +F DG ++C DK IK+W+
Sbjct: 118 ATASEDKSIKVW---SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174
Query: 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
+ + N + IAS SD++V +W+V + ++ ++ H+ V C+
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 234
Query: 255 KFNEDSSVVISGSQDNTVMMWDV 277
F+ + +++ S D T+ + D+
Sbjct: 235 SFHPSDNYLVTASSDGTLKILDL 257
Score = 142 (55.0 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G+ + D+ ++LW P + + H V + D +A+ + DKS+
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSI 126
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+W + + + H V C KF+ D +++S S+D T+ +WD ++
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 62/290 (21%), Positives = 113/290 (38%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
+G T D + LWN + Y GH V + + +AS + D++V LW
Sbjct: 29 NGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWI 88
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SRSHHPIQVR 288
++ H + V V F+ D + + S+D ++ +W + S H VR
Sbjct: 89 PDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVR 148
Query: 289 CLNEALKEARDSIT-SVHSLVK---STKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQ 344
C + + R ++ S +K +T N + FA +++ SG +++
Sbjct: 149 CAKFS-PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA---NFVDFNPSGTCIASA 204
Query: 345 HLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSIT--SVHVSDHEILTASLDCRIRR 402
GS Q V + + N Q + + S H SD+ ++TAS D ++
Sbjct: 205 ---------GSDQTVKVWDVRV-NKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKI 254
Query: 403 YDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATGEL 450
D+ G L+ G P+ F++ + + D + L+ EL
Sbjct: 255 LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
Score = 118 (46.6 bits), Expect = 0.00077, P = 0.00077
Identities = 26/104 (25%), Positives = 52/104 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G+ + GSD+ +K+W+ N LL+ Y H+ VN + + + + +SD ++
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLK 253
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
+ ++ G+ + + H V V F++ + SG D V++W
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 95 (38.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 197 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF 256
+L + + GH + + + Q+A+ + D ++LW R+ H VT V+F
Sbjct: 9 VLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQF 68
Query: 257 NEDSSVVISGSQDNTVMMW 275
+ +++ S S+D TV +W
Sbjct: 69 SPHGNLLASASRDRTVRLW 87
Score = 91 (37.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 38/150 (25%), Positives = 59/150 (39%)
Query: 391 ILTASLDCRIRRYDIRTGNLV---TDYVG-EPIVDACFTRDCQCILTCSTDECLRLFDKA 446
I++ S D I+ +D V +D VG VD F CI + +D+ ++++D
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD--FNPSGTCIASAGSDQTVKVWDVR 216
Query: 447 TGELLEEYKGHKSGDFRIECC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 505
+LL+ Y+ H G + C D+ + SSDG + L++ I TL G
Sbjct: 217 VNKLLQHYQVHSGG---VNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Query: 506 VVNSLCSHPTRKHIMSACGNNVKLWTAEED 535
S S V LW D
Sbjct: 274 FTVSF-SKGGELFASGGADTQVLLWRTNFD 302
Score = 72 (30.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 39/157 (24%), Positives = 69/157 (43%)
Query: 371 FQALKEARDSITSVHVS-DHEIL-TASLDCRIRRYDI-RTGNLVTDYVGEPIVD-ACFTR 426
F K + SV S D + L TAS D I+ + + R L + Y V A F+
Sbjct: 95 FSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 427 DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK 486
D + I++CS D+ ++++D + + + S F + + I SD +
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSD--SVGFANFVDFNPSGTCIASAGSDQTVKV 212
Query: 487 WQL-VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522
W + V+ +HS G VN + HP+ ++++A
Sbjct: 213 WDVRVNKLLQHYQVHSGG---VNCISFHPSDNYLVTA 246
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 190 (71.9 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 38/130 (29%), Positives = 70/130 (53%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
W+ Y+PL + L+ + TRF + +Y T +D+ ++LW+ ++ + GH
Sbjct: 610 WATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 667
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
++ T + + +A+GA+D V+LW++ G V + H V ++F+ D ++ SG
Sbjct: 668 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 727
Query: 267 SQDNTVMMWD 276
S DNTV +WD
Sbjct: 728 SMDNTVRLWD 737
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 161 LFVLSGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 219
L+ SG ++ F D +Y L+ D ++LW+ L Y GH + V D +
Sbjct: 537 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 596
Query: 220 QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
SG D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV
Sbjct: 597 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 654
Score = 157 (60.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
T+F G Y ++ G D+ +LW L+ + GH +VN +S+ +A+G++D++
Sbjct: 589 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 648
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V LW+V G VR + H + + F+ + + +G+ D V++WD+
Sbjct: 649 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 696
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 190 (71.9 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 38/130 (29%), Positives = 70/130 (53%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
W+ Y+PL + L+ + TRF + +Y T +D+ ++LW+ ++ + GH
Sbjct: 612 WATDHYQPLRIFAGH--LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 669
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
++ T + + +A+GA+D V+LW++ G V + H V ++F+ D ++ SG
Sbjct: 670 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 729
Query: 267 SQDNTVMMWD 276
S DNTV +WD
Sbjct: 730 SMDNTVRLWD 739
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 161 LFVLSGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 219
L+ SG ++ F D +Y L+ D ++LW+ L Y GH + V D +
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 220 QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
SG D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Score = 157 (60.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
T+F G Y ++ G D+ +LW L+ + GH +VN +S+ +A+G++D++
Sbjct: 591 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 650
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V LW+V G VR + H + + F+ + + +G+ D V++WD+
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
>UNIPROTKB|Q6P1R4 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC135056 EMBL:BC017081
EMBL:BC062566 EMBL:BC064918 IPI:IPI00335251 RefSeq:NP_071439.3
UniGene:Hs.514599 UniGene:Hs.741994 ProteinModelPortal:Q6P1R4
SMR:Q6P1R4 STRING:Q6P1R4 DMDM:74749069 PaxDb:Q6P1R4 PRIDE:Q6P1R4
DNASU:64118 Ensembl:ENST00000306796 Ensembl:ENST00000354321
GeneID:64118 KEGG:hsa:64118 UCSC:uc002kdq.3 CTD:64118
GeneCards:GC17M080015 H-InvDB:HIX0039074 HGNC:HGNC:30086
HPA:HPA023384 neXtProt:NX_Q6P1R4 PharmGKB:PA142671936
eggNOG:COG0042 HOGENOM:HOG000203649 HOVERGEN:HBG061241
InParanoid:Q6P1R4 KO:K05542 OMA:WEMAEEY OrthoDB:EOG4SN1NJ
GenomeRNAi:64118 NextBio:65992 ArrayExpress:Q6P1R4 Bgee:Q6P1R4
CleanEx:HS_DUS1L Genevestigator:Q6P1R4 GermOnline:ENSG00000169718
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 Uniprot:Q6P1R4
Length = 473
Score = 192 (72.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 41/112 (36%), Positives = 61/112 (54%)
Query: 11 STLLKNLKHCDSTLWT-SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STS 67
S L+ +H + + S+L +R L R H LC+TPM+ A F++ + R
Sbjct: 11 SRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVC 70
Query: 68 PEDTPLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
PED PL+VQF +N+ + FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 71 PEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL 122
Score = 37 (18.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 367 HNSCFQALKEARDSITSVHVSDHEILTASLDCRIR 401
H F L++ D + + + HE L+ + C+IR
Sbjct: 117 HYGAF--LQDEWDLLQRMILLAHEKLSVPVTCKIR 149
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 175 (66.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 77/337 (22%), Positives = 146/337 (43%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDA--TAACDSSQIASGASDKS 229
F D + TC DKK+K+WN L+ TY H+ +VN T + +A+G+SD
Sbjct: 665 FSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCF 724
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP-IQVR 288
+ LW++ + H + V +F+ D ++ S S D T+ +WD S + I V+
Sbjct: 725 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVK 784
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLLTK-LVFAFRCKYLNGLLSGVLMSTQHLM 347
L++ ++ + + + + + K +F F + +GLL G + + H
Sbjct: 785 QFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDI-HTSGLL-GEIHTGHHST 842
Query: 348 V-LLDFLGSTQIGDVTP----ISIHNSCFQA-LKEARDSITSVH-----VSDHEILTASL 396
+ DF + V + + N+ ++ + + R ++ VH LT+S
Sbjct: 843 IQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSD 902
Query: 397 DCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 456
D IR ++ + + + + VD F + +L L+L + TG++ +Y
Sbjct: 903 DQTIRLWETKKVCKNSAVMLKQEVDVVFQENEVMVLAVDHIRRLQLINGRTGQI--DYLT 960
Query: 457 HKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDS 492
+ ++ CC S Q I G +G I +LV++
Sbjct: 961 ----EAQVSCCCLSPHLQYIAFGDENGAIEILELVNN 993
Score = 145 (56.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG +CG+DK ++++ L H EV + D IA+ + DK
Sbjct: 620 HACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDK 679
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSR 280
V +W TG+ V + EH+ +V C F S ++ +GS D + +WD+ +
Sbjct: 680 KVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQK 733
Score = 136 (52.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 417 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 476
+ + ACF+ D Q I +C D+ L++F TGE L E K H+ + CC S D +
Sbjct: 616 DAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHED---EVLCCAFSTDDRFI 672
Query: 477 CGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 530
S D K+ W +S L+H+ + C H T H++ A G++ +KLW
Sbjct: 673 ATCSVDKKVKIW----NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLW 728
Score = 99 (39.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI 264
H V A + D +IAS +DK++ +++ TG+ + + H +V C F+ D +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 673
Query: 265 SGSQDNTVMMWD------VKSRSHHPIQVRC 289
+ S D V +W+ V + H QV C
Sbjct: 674 TCSVDKKVKIWNSMTGELVHTYDEHSEQVNC 704
Score = 98 (39.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 40/154 (25%), Positives = 69/154 (44%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYV-GEPIVDAC-FTRDCQCILTCSTDECLRLF 443
+ + +L+ S D ++ ++I TGN D+V + V +C + D + S D+ +++
Sbjct: 1053 LKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIW 1112
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSS--QISTLIH 500
L E +GH +G R C S DS + G +G+I W + + + +
Sbjct: 1113 SFDLLLPLHELRGH-NGCVR--CSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLS 1169
Query: 501 SVGKAV----VNSLCSHPTRKHIMSACGNNVKLW 530
G A V LC P K ++SA G +K W
Sbjct: 1170 EEGAATHGGWVTDLCFSPDGKMLISA-GGYIKWW 1202
Score = 73 (30.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/110 (20%), Positives = 52/110 (47%)
Query: 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG--DFRIECCLDSKDSQIFCGSSD 481
FT D + +++ S D +++++ + + +GH+ DFR+ K+S++ S D
Sbjct: 1011 FTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETVKDFRL-----LKNSRLLSWSFD 1064
Query: 482 GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWT 531
G + W ++ ++ + G V++ SH K ++ K+W+
Sbjct: 1065 GTVKVWNIITGNKEKDFVCHQG-TVLSCDISHDATKFSSTSADKTAKIWS 1113
>WB|WBGene00017178 [details] [associations]
symbol:atg-16.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:FO081068 PIR:T15958
RefSeq:NP_508768.1 ProteinModelPortal:Q19124 SMR:Q19124
PaxDb:Q19124 EnsemblMetazoa:F02E8.5 GeneID:180717
KEGG:cel:CELE_F02E8.5 CTD:180717 WormBase:F02E8.5 eggNOG:COG2319
GeneTree:ENSGT00700000104505 HOGENOM:HOG000016928 InParanoid:Q19124
OMA:STRDDTI NextBio:910606 InterPro:IPR020472 PRINTS:PR00320
Uniprot:Q19124
Length = 578
Score = 132 (51.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 174 VDGSYCLTCGSDKKIKLWNPYRN---LLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+DG T GSD+ IK+W + + T G D + ++DK+V
Sbjct: 301 LDGETFATGGSDRNIKIWKVDGHGGYTRIGTLAGSNAAFTRIDYERDRKHFIASSNDKNV 360
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+W + + + H+ +VTCVKF + S V SGS D + +WD++++
Sbjct: 361 RIWNLDNSRLLSTLSGHSDQVTCVKFYQSHSAV-SGSADRVIKIWDIQNQ 409
Score = 103 (41.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 44/179 (24%), Positives = 80/179 (44%)
Query: 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV-TDYV 415
+I D+ S F A K D T++ S + D ++R YD R+ + V T +
Sbjct: 402 KIWDIQNQRCSRSLFPASK-VLDVATNMGASPSLFASGHFDKKLRFYDGRSTDPVRTVDM 460
Query: 416 GEPIVDACFTRD-CQCILTCSTDECLRLFDKATGELLEEY--KGHKSGDFRIECCLDSKD 472
G I T C+ +L + D+ + L D T + + Y + +++ L S +
Sbjct: 461 GGRITSLDVTMSGCE-LLVSTRDDTISLIDLRTFQTVHCYSAENYRTSSDLSRVVLSSGN 519
Query: 473 SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 530
+ GSS+G I+ W +S+++ + S + + SL +PT ++S+ V LW
Sbjct: 520 EYVAAGSSNGSIFVWNR-NSTKLEKQLCSNSENAIFSLSWNPTGYGLLSSSKQKFVTLW 577
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 153 (58.9 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 32/106 (30%), Positives = 51/106 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G+ +C +D IKLW+ +KT GH H V+ Q+ S + DK++
Sbjct: 156 FDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIK 215
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+WE TG ++ H V + +ED S + S S D T+ W++
Sbjct: 216 VWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI 261
Score = 147 (56.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
RF G ++ DK IK+W +KT GH V T + D S IAS ++D+++
Sbjct: 197 RFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTI 256
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS 267
W + G+ + +REH+ V C+ F+ + + I GS
Sbjct: 257 KTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGS 293
Score = 133 (51.9 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F S ++ D IK+W+ +T GH + V D + +AS ++D ++
Sbjct: 113 KFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTI 172
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
LW+ T V+ H V+CV+F +IS S+D T+ +W+
Sbjct: 173 KLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
Score = 95 (38.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GH + +N S + S + D ++ +W+ +G+ R + H + V + F++ +++
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 264 ISGSQDNTVMMWD------VKSRSHHPIQVRCL 290
S S D T+ +WD VK+ H V C+
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCV 196
Score = 87 (35.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 22/92 (23%), Positives = 44/92 (47%)
Query: 370 CFQALKEARDSITSVHV--SDHEILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFT 425
C + L +++ V S +++++S D I+ ++ TG + VG + +
Sbjct: 182 CVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVS 241
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGH 457
D CI +CS D+ ++ ++ GE L Y+ H
Sbjct: 242 EDGSCIASCSNDQTIKTWNIVKGECLATYREH 273
Score = 76 (31.8 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 26/102 (25%), Positives = 48/102 (47%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDC-QCILTCSTDECLRLFDKATG 448
+ T S D I+ +++ TG + Y+G + V A C + +L+ D+ +R++D A G
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQG 378
Query: 449 ELLEEY-KGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
++ + H ++ CL + I G D I W+L
Sbjct: 379 RCIKTINEAHTHFISCLDFCLHNP--HIATGGVDDVIKVWKL 418
Score = 63 (27.2 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 26/107 (24%), Positives = 44/107 (41%)
Query: 428 CQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK- 486
C + T S D+ +++++ ATG L Y GH D + + D K +
Sbjct: 316 CGYLATGSRDKTIKIWELATGRCLATYIGH---DNWVRAVRFHPCGKFLLSVGDDKTIRV 372
Query: 487 WQLVDSSQISTLIHSVGKAVVNSL--CSHPTRKHIMSACGNNV-KLW 530
W + I T I+ ++ L C H HI + ++V K+W
Sbjct: 373 WDIAQGRCIKT-INEAHTHFISCLDFCLH--NPHIATGGVDDVIKVW 416
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 188 (71.2 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 80/355 (22%), Positives = 144/355 (40%)
Query: 154 PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213
PL + R + G H+ P +Y D + + +LK GH V
Sbjct: 386 PLHIKRRKVIKPGFTHS--PWKSAYIRQHRIDTNWRRGDLKSPKVLK---GHDDHVITCL 440
Query: 214 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 273
C ++I SG+ D ++ +W TG+ +R H V + ++ ++ISGS D T+
Sbjct: 441 QFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLK 497
Query: 274 MWDVKSRS--H----HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAF 327
+W+ ++ H H VRC++ K V + +L V A
Sbjct: 498 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 557
Query: 328 RCKYLNG--LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385
RC +G ++SG DF+ ++ D P + +C L+ + + S+
Sbjct: 558 RCVQYDGRRVVSGAY----------DFM--VKVWD--PET--ETCLHTLQGHTNRVYSLQ 601
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
+++ SLD IR +D+ TGN + G + + +++ + D ++++D
Sbjct: 602 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 661
Query: 446 ATGELLEEYKG-HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499
TG+ L+ +G HK CL + + S DG + W L I L+
Sbjct: 662 KTGQCLQTLQGPHKHQS--AVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLV 714
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 444 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 501
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H----HPIQVRC 289
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H H VRC
Sbjct: 502 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 559
Query: 290 LN----EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
+ + A D + V T H G T V++ + ++ ++SG L +
Sbjct: 560 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQFDGIH-VVSGSLDT--- 614
Query: 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITS-VHVSDHEILTASLDCRIRRYD 404
S ++ DV +C L S+TS + + D+ +++ + D ++ +D
Sbjct: 615 ---------SIRVWDVET----GNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWD 660
Query: 405 IRTGNLVTDYVG---EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
I+TG + G C + ++T S D ++L+D TGE + +SG
Sbjct: 661 IKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESGG 720
Query: 462 FR-IECCLDSKDSQIFC--GSSDG 482
+ + + ++++ C GS +G
Sbjct: 721 SGGVVWRIRASNTKLVCAVGSRNG 744
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 189 (71.6 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 47/133 (35%), Positives = 72/133 (54%)
Query: 148 SIRVYRPLT--VNRELFVLSG-LMHTRFPVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYG 203
++R++ P T + + L SG ++ F DG L GS DK ++LW+P L +T
Sbjct: 718 TVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRL-LASGSFDKTVRLWDPATGSLQQTLR 776
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GH++ V + D +ASG+ DK+V LW+ TG + R H+ V V F+ D ++
Sbjct: 777 GHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLL 836
Query: 264 ISGSQDNTVMMWD 276
SGS D TV +WD
Sbjct: 837 ASGSFDKTVRLWD 849
Score = 167 (63.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 43/126 (34%), Positives = 66/126 (52%)
Query: 180 LTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GSD + ++LW+P L +T GH+ V + D +ASG+ DK+V LW+ TG
Sbjct: 710 LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATG 769
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEAR 298
+ R H++ V V F+ D ++ SGS D TV +WD + S L + L+
Sbjct: 770 SLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGS--------LQQTLRGHS 821
Query: 299 DSITSV 304
D++ SV
Sbjct: 822 DTVRSV 827
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 134 RTITRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTR 171
R I R+L L K S+ + LT EL + G R
Sbjct: 321 RAIIRLLPSLQKAKSVHLRIFLTSRPELPISLGFSEIR 358
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 188 (71.2 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 39/134 (29%), Positives = 73/134 (54%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
W+ Y+PL + L+ + TR+ + +Y T +D+ ++LW+ ++ + GH
Sbjct: 613 WATDHYQPLRIFAGH--LADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 670
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
++ T + + +A+GA+D V+LW++ G V + H V ++F+ D ++ SG
Sbjct: 671 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 730
Query: 267 SQDNTVMMWD-VKS 279
S DNTV +WD VK+
Sbjct: 731 SMDNTVRLWDAVKA 744
Score = 159 (61.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 161 LFVLSGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 219
L+ SG ++ F D +Y L+ D ++LW+ L Y GH + V D +
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 220 QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
SG D+ LW QP+R + H + V C +++ +S+ V +GS D TV +WDV
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDV 657
Score = 157 (60.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
T+F G Y ++ G D+ +LW L+ + GH +VN +S+ +A+G++D++
Sbjct: 592 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRT 651
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V LW+V G VR + H + + F+ + + +G+ D V++WD+
Sbjct: 652 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 130 (50.8 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 151 VYRPLTVNRELFVLSGLMHTRFPV---DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAH 207
++ LT N E + + + R V + S+ +T +K W N + K Y H
Sbjct: 172 LWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNV-KMYQAHKE 230
Query: 208 EVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS 267
+ + + S+ SG+ D ++ +W+ Q R R H + V CV ++ +++SGS
Sbjct: 231 AIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGS 290
Query: 268 QDNT--VMMWDVKS 279
+DN + +WD KS
Sbjct: 291 KDNQQPIKIWDPKS 304
Score = 108 (43.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 40/155 (25%), Positives = 74/155 (47%)
Query: 385 HVSDHEILTASLDCR--IRRYDIRTG-NLVTDYVGEP-IVDACFTRDCQCILTCSTDECL 440
H I++ S D + I+ +D ++G L T + + ++D + + ++T S D L
Sbjct: 280 HPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLL 339
Query: 441 RLFD-KATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTL 498
+LFD + E ++ ++GHK + +FC G SDG I W + +I
Sbjct: 340 KLFDIRNLREEVQVFRGHKKEASSVSW--HPIHEGLFCSGGSDGSILFWNVGTDKEIGC- 396
Query: 499 IHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWT 531
+ + ++V +L HP HI+ + N+ +K WT
Sbjct: 397 VETAHDSIVWTLAWHPLG-HILCSGSNDHTIKFWT 430
Score = 38 (18.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 26/131 (19%), Positives = 54/131 (41%)
Query: 270 NTVMMWDVKSRSHHPIQVRCLNEAL--KEARDSITSV-HSLVKST--KNHLSNGLLTKL- 323
N + W R+ P V ++E L +EA+D+ + H + + L++G+L L
Sbjct: 515 NFQVNWAGPRRADDP-SVLSIHEELAAREAKDTTNGLNHQQISENTMEGILASGMLNGLD 573
Query: 324 ------VFAFRCKYL-----NGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQ 372
V + +++ + L++ + + L +D ++ DV P+ +
Sbjct: 574 PQTIVGVLVYN-RFIRVHPDSRLMAAIRQGAEFLNKYIDAGKLEELNDVVPVRDRSRSVS 632
Query: 373 ALKEARDSITS 383
EAR + S
Sbjct: 633 PTVEARGEMVS 643
>UNIPROTKB|G3V221 [details] [associations]
symbol:WDR83 "Mitogen-activated protein kinase organizer 1,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0016301
EMBL:CH471106 UniGene:Hs.657204 HGNC:HGNC:32672 ChiTaRS:WDR83
EMBL:AC010422 SMR:G3V221 Ensembl:ENST00000548381
Ensembl:ENST00000553179 Uniprot:G3V221
Length = 71
Score = 162 (62.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 27/39 (69%), Positives = 32/39 (82%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV 209
RF VDG+YCLTCGSDK +KLWNP R LL+TY GH +E+
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEL 70
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + +T DK IK+W+ YR L + H H V A + D I S + DK++
Sbjct: 110 FSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR---SHHPIQ-- 286
+W+ T+ Q V + + V F+ + + + S D+ V +WD++ H+ +
Sbjct: 170 IWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSC 229
Query: 287 -VRCLN 291
V CL+
Sbjct: 230 GVNCLS 235
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 38/156 (24%), Positives = 77/156 (49%)
Query: 138 RILYELPKEWSIRVYRPLTVNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLW 191
+ L ++ SI+V+ ++ R+ F+ S HT +F DG ++C DK IK+W
Sbjct: 115 QFLVTASEDKSIKVW---SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 192 NPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV 251
+ + + N + + + IAS SD +V +W++ + ++ ++ H+ V
Sbjct: 172 DTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGV 231
Query: 252 TCVKFNEDSSVVISGSQDNTVMMWD-VKSRSHHPIQ 286
C+ F+ + +++ S D TV + D V+ R + +Q
Sbjct: 232 NCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQ 267
Score = 136 (52.9 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 27/110 (24%), Positives = 50/110 (45%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G+ + DK ++LW R + H V + D + + + DKS+
Sbjct: 67 QFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSI 126
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+W + + + H V C KF+ D +++S S+D T+ +WD S+
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK 176
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 28/112 (25%), Positives = 54/112 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F +G+ + GSD +++W+ N LL+ Y H+ VN + + + + +SD +V
Sbjct: 194 FSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVK 253
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 283
+ ++ G+ + + H V V F++D + SG D V++W H
Sbjct: 254 ILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSFNQVH 305
Score = 105 (42.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 193 PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVT 252
P +L + + GH + A + + QIA+ + D ++LW + R+ H VT
Sbjct: 5 PEDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVT 64
Query: 253 CVKFNEDSSVVISGSQDNTVMMW--DVKSRS 281
++F+ +++ S S+D TV +W D K +S
Sbjct: 65 SLQFSPQGNLLASASRDKTVRLWVLDRKGKS 95
Score = 95 (38.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGEPIVDAC--FTRDCQCILTCSTDECLRLFDKATG 448
I +A D +R +DIR L+ Y C F ++T S+D +++ D G
Sbjct: 201 IASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEG 260
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ 488
L+ +GH F + SKD ++F G +D ++ W+
Sbjct: 261 RLIYTLQGHTGPVFTVSF---SKDGELFTSGGADAQVLVWR 298
Score = 89 (36.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 391 ILTASLDCRIRRYDIRTGNLV---TDYVG-EPIVDACFTRDCQCILTCSTDECLRLFDKA 446
I++ S D I+ +D + V +D VG VD F+ + CI + +D +R++D
Sbjct: 159 IVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVD--FSPNGTCIASAGSDHAVRIWDIR 216
Query: 447 TGELLEEYKGHKSGDFRIECC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 498
LL+ Y+ H G + C + + SSDG + LV+ I TL
Sbjct: 217 MNRLLQHYQVHSCG---VNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTL 266
Score = 70 (29.7 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 381 ITSVHVS-DHEIL-TASLDCRIRRYDI-RTGNLVTDYVGEPIVD-ACFTRDCQCILTCST 436
+ SV S D + L TAS D I+ + + R L + Y V A F+ D + I++CS
Sbjct: 105 VRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 437 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIS 496
D+ ++++D + + + + S F + I SD + W + + +
Sbjct: 165 DKTIKIWDTTSKQCVNNFSD--SVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQ 222
Query: 497 TL-IHSVGKAVVNSLCSHPTRKHIMSACGNN-VKL 529
+HS G VN L HP+ +++A + VK+
Sbjct: 223 HYQVHSCG---VNCLSFHPSGNSLVTASSDGTVKI 254
>UNIPROTKB|J9NYR0 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AAEX03006160
EMBL:AAEX03006161 Ensembl:ENSCAFT00000045880 Uniprot:J9NYR0
Length = 584
Score = 190 (71.9 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STSPEDTPLVVQFASNNHDD 84
S+L +R L R H LC+TPM+ A F++ + R PED PL+VQF +N+ +
Sbjct: 28 SELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPEDRPLIVQFCANDPEV 87
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
FV+A +C+ +DLN GCPQ A + YG L
Sbjct: 88 FVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFL 122
Score = 40 (19.1 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 367 HNSCFQALKEARDSITSVHVSDHEILTASLDCRIR 401
H F L+E D + + + HE L+ + C+IR
Sbjct: 117 HYGAF--LQEEWDLLQRMILLAHEKLSVPVTCKIR 149
>ZFIN|ZDB-GENE-030131-1435 [details] [associations]
symbol:dus1l "dihydrouridine synthase 1-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 Pfam:PF01207
ZFIN:ZDB-GENE-030131-1435 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:BX897685 IPI:IPI00481340
ProteinModelPortal:F1QQD1 Ensembl:ENSDART00000127028
ArrayExpress:F1QQD1 Bgee:F1QQD1 Uniprot:F1QQD1
Length = 511
Score = 184 (69.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 37/95 (38%), Positives = 57/95 (60%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSK-ARNNEFS-TSPEDTPLVVQFASNNHDD 84
S+L +R L R H +LC+TPM+ A F++ + R N +S + ED PL+ QF +N+ +
Sbjct: 60 SELAWRLLSRRHGAELCYTPMLHAQVFVRDANYRRENLYSEVNQEDRPLITQFCANDPEV 119
Query: 85 FVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
F++A +C+ +DLN GCPQ A + YG L
Sbjct: 120 FIQAALLAQDYCDAIDLNLGCPQMIAKRGHYGVFL 154
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 148 (57.2 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 35/133 (26%), Positives = 69/133 (51%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
D + G ++I++W+ ++++ GH V +A+ +D+ V++W+
Sbjct: 71 DDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWD 130
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSRSHHPIQVRCLNE 292
V G +R H V+ + F+ DS+ ++ISGS D TV +WD+ +++ + +CL
Sbjct: 131 VDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKN---TEKKCL-- 185
Query: 293 ALKEARDS-ITSV 304
A+ E S +TS+
Sbjct: 186 AIMEKHFSAVTSI 198
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/120 (25%), Positives = 54/120 (45%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239
+T DK +K+W LKT+ GH V A+ D +Q S +D + LW V T +
Sbjct: 557 MTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSE 616
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARD 299
+ + +H KV + + + ++ +G D + +W + S R EA+ ++
Sbjct: 617 CIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDDFRKEEEAILRGQE 676
Score = 120 (47.3 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 33/137 (24%), Positives = 62/137 (45%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ--IASGASDKSVILW 233
G T G+D+K+ +W+ + GH V+ DS++ + SG+ D +V +W
Sbjct: 114 GGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVW 173
Query: 234 EVTTGQPVRR----WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRC 289
++ ++ +H S VT + +ED + S +D V +WD+ H +
Sbjct: 174 DLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDL-----HDYSCKA 228
Query: 290 LNEALKEARDSITSVHS 306
A E +++T+V S
Sbjct: 229 -TVATYEVLEAVTTVSS 244
Score = 94 (38.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 155 LTVNRELFVLSGLMHTRFPVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDAT 213
L ++E+ VLS + T G+ + GS DK ++LWN + GH ++
Sbjct: 397 LAGHKEV-VLS--LDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVA 453
Query: 214 AACDS-SQIASGASDKSVILWEVT-----TGQPVR-RWRE----HASKVTCVKFNEDSSV 262
A S S SG+ D+++ +W + + +P+ + R H + V + S+
Sbjct: 454 FAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSL 513
Query: 263 VISGSQDNTVMMWDVKSRSH 282
V +GS+D T +W + H
Sbjct: 514 VCTGSEDRTASIWRLPDLVH 533
Score = 93 (37.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 20/103 (19%), Positives = 45/103 (43%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DGS+ + C I + + + + T G + + + D + S + + +W+
Sbjct: 30 DGSF-IACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWD 88
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+ T + +R W+ H V + + ++ + D V++WDV
Sbjct: 89 LETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDV 131
Score = 89 (36.4 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 429 QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
QC++T S D+ ++++ + G L+ ++GH S R D + CG+ DG + W
Sbjct: 554 QCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQF-VSCGA-DGLLKLWN 611
Query: 489 LVDSSQIST 497
+ S I+T
Sbjct: 612 VNTSECIAT 620
Score = 61 (26.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 27/129 (20%), Positives = 51/129 (39%)
Query: 404 DIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFR 463
+++T ++V + + I R+ + T S D ++ + KGHK F
Sbjct: 488 NLKTRSVVAAH-DKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFS 546
Query: 464 IECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 523
+E + D + S D + W + D S + T + S + T+ +C
Sbjct: 547 VE--FSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQ---FVSC 601
Query: 524 GNN--VKLW 530
G + +KLW
Sbjct: 602 GADGLLKLW 610
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 186 (70.5 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 38/134 (28%), Positives = 72/134 (53%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
W+ Y+PL + L+ + TRF + +Y T +D+ ++LW+ ++ + GH
Sbjct: 592 WATDHYQPLRIFAGH--LADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHK 649
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
++ + + +A+GA+D V+LW++ G V + H + ++F+ D ++ SG
Sbjct: 650 GPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASG 709
Query: 267 SQDNTVMMWD-VKS 279
S DNTV +WD VK+
Sbjct: 710 SMDNTVRLWDAVKA 723
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 40/118 (33%), Positives = 61/118 (51%)
Query: 161 LFVLSGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 219
L+ SG ++ T F D +Y L+C D ++LW+ L Y GH + V D +
Sbjct: 519 LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 578
Query: 220 QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
SG D+ LW QP+R + H + VTC +F+ +S+ + +GS D TV +WDV
Sbjct: 579 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDV 636
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
T+F G Y ++ G D+ +LW L+ + GH +V +S+ IA+G++D++
Sbjct: 571 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRT 630
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V LW+V G VR + H + + F+ + + +G+ D V++WD+
Sbjct: 631 VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 143 (55.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG+Y L+ D+ ++LW+ + + GH +V + A + QI S + DK+V +W
Sbjct: 77 DGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWN 136
Query: 235 VTTGQPVRRWREHASKVTCVKFN--EDSSVVISGSQDNTVMMWDVKSRS 281
T G+ + H V+ V+ + + SS VIS S D TV WD+ S
Sbjct: 137 -TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYS 184
Score = 135 (52.6 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 200 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 259
K++ GH+H V D T + D + S + D+++ LW++ TG+ +R+ H V V ++
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 260 SSVVISGSQDNTVMMWD 276
++S S+D TV +W+
Sbjct: 120 LRQIVSASRDKTVKVWN 136
Score = 115 (45.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/118 (22%), Positives = 58/118 (49%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDA--TAACDSSQIASGASDKSVILWEVTT 237
++ DK +K+WN + T GH V+ + + SS + S + DK+V W++
Sbjct: 124 VSASRDKTVKVWNTIGECMA-TLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLAD 182
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSRSHHPIQVRCLNEAL 294
+ H ++C+ + D S+ S +D +++WD+ K+++ + ++ + AL
Sbjct: 183 YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHAL 240
Score = 103 (41.3 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 197 LLLK-TYGGHAHEVND-ATAACDSSQIASGASDKSVILWEVTTGQ------PVRRWREHA 248
L+L+ T GH V AT + SG+ DK++I W++T G+ P + ++ H+
Sbjct: 7 LVLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHS 66
Query: 249 SKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
V V + D + +S S D T+ +WD+++
Sbjct: 67 HIVQDVTISADGAYALSASWDRTLRLWDLET 97
Score = 98 (39.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/114 (22%), Positives = 50/114 (43%)
Query: 392 LTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDKATGE 449
L+AS D +R +D+ TG +VG ++ ++ + I++ S D+ +++++ GE
Sbjct: 82 LSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWN-TIGE 140
Query: 450 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 503
+ GH + + S + S D + W L D S + I G
Sbjct: 141 CMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTG 194
Score = 88 (36.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS--DGKIYKWQ 488
+++ S D+ ++ +D A + ++ GH +G I C S D + C S+ DG I W
Sbjct: 166 VISASWDKTVKSWDLADYSVNADFIGH-TG--YISCITLSPDGSL-CASAGKDGVIILWD 221
Query: 489 LVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 534
L + + TL KA V++L P R + +A + +K++ +E
Sbjct: 222 LNKNKTLYTL---EAKAEVHALAFSPNRYWLAAATTSGIKIFKLQE 264
Score = 57 (25.1 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 13/60 (21%), Positives = 30/60 (50%)
Query: 370 CFQALKEARDSITSVHVSDHE----ILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFT 425
C L D +++V +S + +++AS D ++ +D+ ++ D++G +C T
Sbjct: 141 CMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCIT 200
Score = 48 (22.0 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 432 LTCSTDECLRLFDKATGELLEEYK-----GHKSGDFRIECCLDSKDSQ-IFCGSSDGKIY 485
L +T +++F LL+E K G + D S D Q +F G +D I
Sbjct: 249 LAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIR 308
Query: 486 KWQLVDSS 493
WQ++ S
Sbjct: 309 VWQVMTPS 316
Score = 39 (18.8 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 359 GDVTPISIHNSCFQALKEARDSITSV 384
GDV +SI + Q + +RD V
Sbjct: 109 GDVLSVSIAKNLRQIVSASRDKTVKV 134
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 143 (55.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG+Y L+ D+ ++LW+ + + GH +V + A + QI S + DK+V +W
Sbjct: 77 DGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWN 136
Query: 235 VTTGQPVRRWREHASKVTCVKFN--EDSSVVISGSQDNTVMMWDVKSRS 281
T G+ + H V+ V+ + + SS VIS S D TV WD+ S
Sbjct: 137 -TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYS 184
Score = 135 (52.6 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 200 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 259
K++ GH+H V D T + D + S + D+++ LW++ TG+ +R+ H V V ++
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 260 SSVVISGSQDNTVMMWD 276
++S S+D TV +W+
Sbjct: 120 LRQIVSASRDKTVKVWN 136
Score = 115 (45.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/118 (22%), Positives = 58/118 (49%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDA--TAACDSSQIASGASDKSVILWEVTT 237
++ DK +K+WN + T GH V+ + + SS + S + DK+V W++
Sbjct: 124 VSASRDKTVKVWNTIGECMA-TLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLAD 182
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSRSHHPIQVRCLNEAL 294
+ H ++C+ + D S+ S +D +++WD+ K+++ + ++ + AL
Sbjct: 183 YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHAL 240
Score = 103 (41.3 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 197 LLLK-TYGGHAHEVND-ATAACDSSQIASGASDKSVILWEVTTGQ------PVRRWREHA 248
L+L+ T GH V AT + SG+ DK++I W++T G+ P + ++ H+
Sbjct: 7 LVLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHS 66
Query: 249 SKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
V V + D + +S S D T+ +WD+++
Sbjct: 67 HIVQDVTISADGAYALSASWDRTLRLWDLET 97
Score = 98 (39.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/114 (22%), Positives = 50/114 (43%)
Query: 392 LTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDKATGE 449
L+AS D +R +D+ TG +VG ++ ++ + I++ S D+ +++++ GE
Sbjct: 82 LSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWN-TIGE 140
Query: 450 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 503
+ GH + + S + S D + W L D S + I G
Sbjct: 141 CMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTG 194
Score = 88 (36.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS--DGKIYKWQ 488
+++ S D+ ++ +D A + ++ GH +G I C S D + C S+ DG I W
Sbjct: 166 VISASWDKTVKSWDLADYSVNADFIGH-TG--YISCITLSPDGSL-CASAGKDGVIILWD 221
Query: 489 LVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 534
L + + TL KA V++L P R + +A + +K++ +E
Sbjct: 222 LNKNKTLYTL---EAKAEVHALAFSPNRYWLAAATTSGIKIFKLQE 264
Score = 57 (25.1 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 13/60 (21%), Positives = 30/60 (50%)
Query: 370 CFQALKEARDSITSVHVSDHE----ILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFT 425
C L D +++V +S + +++AS D ++ +D+ ++ D++G +C T
Sbjct: 141 CMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCIT 200
Score = 48 (22.0 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 432 LTCSTDECLRLFDKATGELLEEYK-----GHKSGDFRIECCLDSKDSQ-IFCGSSDGKIY 485
L +T +++F LL+E K G + D S D Q +F G +D I
Sbjct: 249 LAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIR 308
Query: 486 KWQLVDSS 493
WQ++ S
Sbjct: 309 VWQVMTPS 316
Score = 39 (18.8 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 359 GDVTPISIHNSCFQALKEARDSITSV 384
GDV +SI + Q + +RD V
Sbjct: 109 GDVLSVSIAKNLRQIVSASRDKTVKV 134
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 188 (71.2 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 90/385 (23%), Positives = 165/385 (42%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI--ASGASDKS 229
F D + TC DKK+K+WN L+ Y H+ +VN +S + A+ +SD
Sbjct: 666 FSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCF 725
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP-IQVR 288
+ LW++ + H + V +F+ D ++ S S D T+ +WDVKS + I V+
Sbjct: 726 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVK 785
Query: 289 --CLN-EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
LN E +E + I S + + K +F F + GLL+ +
Sbjct: 786 QFFLNSEEPQEDMEVIVKCCSW-SADGTRIMVAAKNK-IFLFDI-HTGGLLAEIHTGHHS 842
Query: 346 LMVLLDFLGSTQIGDVTP----ISIHN--SCFQALKEARDSITSVHV-----SDHEILTA 394
+ DF + V + + N SC + + + R ++ VH LT+
Sbjct: 843 TIQYCDFSPQNHLAVVALSQCCVELWNMDSCLK-VADCRGHLSWVHCVMFSPDGSSFLTS 901
Query: 395 SLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 454
S D IR ++ + + V + +D F + +L + L+L + TG++ +Y
Sbjct: 902 SDDQTIRLWETKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQI--DY 959
Query: 455 KGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 512
+ ++ CC S Q I G DG + +L+++ + I H K V + +
Sbjct: 960 LI----EAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHK--KTVRHIQFT 1013
Query: 513 HPTRKHIMSACGNNVKLWTAE-EDY 536
+ I S+ +++++W + E+Y
Sbjct: 1014 DDGKTLISSSDDSSIQVWNWQSEEY 1038
Score = 132 (51.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG +CG DK ++++ L H EV + D IA+ + DK
Sbjct: 621 HACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDK 680
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI--SGSQDNTVMMWDVKSR 280
V +W TG V + EH+ +V C F +S ++ + S D + +WD+ +
Sbjct: 681 KVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQK 734
Score = 104 (41.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYV-GEPIVDAC-FTRDCQCILTCSTDECLRLF 443
+ + ++L+ S D ++ + I TG + D+V + V +C + D + S D+ +++
Sbjct: 1054 LKNSKLLSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1113
Query: 444 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQI---STLI 499
L E +GHK + C + S DS + G +G+I W + + + + ++
Sbjct: 1114 SFELLSPLHELRGHKGC---VRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPIL 1170
Query: 500 HSVGKAV----VNSLCSHPTRKHIMSACGNNVKLW 530
G A V LC P K ++SA G +K W
Sbjct: 1171 VEEGAATHGGWVTDLCFSPDSKMLVSA-GGYLKWW 1204
Score = 94 (38.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 27/101 (26%), Positives = 44/101 (43%)
Query: 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
+NL H V A + D +IAS DK++ +++ TG+ + + H +V C
Sbjct: 605 KNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCC 664
Query: 255 KFNEDSSVVISGSQDNTVMMWD------VKSRSHHPIQVRC 289
F+ D + + S D V +W+ V H QV C
Sbjct: 665 AFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNC 705
Score = 69 (29.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 26/125 (20%), Positives = 53/125 (42%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLW-----NPYRNLLLKTYGGHAHEVND----ATAAC--- 216
H RF D +C +D +KLW N +++ +K + ++ E + C
Sbjct: 749 HCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWS 808
Query: 217 -DSSQIASGASDKSVILWEVTTGQPVRRWRE-HASKVTCVKFNEDSSVVISGSQDNTVMM 274
D ++I A +K + L+++ TG + H S + F+ + + + V +
Sbjct: 809 ADGTRIMVAAKNK-IFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVEL 867
Query: 275 WDVKS 279
W++ S
Sbjct: 868 WNMDS 872
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 188 (71.2 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 90/385 (23%), Positives = 165/385 (42%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI--ASGASDKS 229
F D + TC DKK+K+WN L+ Y H+ +VN +S + A+ +SD
Sbjct: 673 FSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCF 732
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP-IQVR 288
+ LW++ + H + V +F+ D ++ S S D T+ +WDVKS + I V+
Sbjct: 733 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVK 792
Query: 289 --CLN-EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
LN E +E + I S + + K +F F + GLL+ +
Sbjct: 793 QFFLNSEEPQEDMEVIVKCCSW-SADGTRIMVAAKNK-IFLFDI-HTGGLLAEIHTGHHS 849
Query: 346 LMVLLDFLGSTQIGDVTP----ISIHN--SCFQALKEARDSITSVHV-----SDHEILTA 394
+ DF + V + + N SC + + + R ++ VH LT+
Sbjct: 850 TIQYCDFSPQNHLAVVALSQCCVELWNMDSCLK-VADCRGHLSWVHCVMFSPDGSSFLTS 908
Query: 395 SLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 454
S D IR ++ + + V + +D F + +L + L+L + TG++ +Y
Sbjct: 909 SDDQTIRLWETKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQI--DY 966
Query: 455 KGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 512
+ ++ CC S Q I G DG + +L+++ + I H K V + +
Sbjct: 967 LI----EAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHK--KTVRHIQFT 1020
Query: 513 HPTRKHIMSACGNNVKLWTAE-EDY 536
+ I S+ +++++W + E+Y
Sbjct: 1021 DDGKTLISSSDDSSIQVWNWQSEEY 1045
Score = 132 (51.5 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG +CG DK ++++ L H EV + D IA+ + DK
Sbjct: 628 HACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDK 687
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI--SGSQDNTVMMWDVKSR 280
V +W TG V + EH+ +V C F +S ++ + S D + +WD+ +
Sbjct: 688 KVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQK 741
Score = 100 (40.3 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 386 VSDHEILTASLDCRIRR-YDIRTGNLVTDYV-GEPIVDAC-FTRDCQCILTCSTDECLRL 442
+ + ++L+ S D +++ + I TG + D+V + V +C + D + S D+ ++
Sbjct: 1061 LKNSKLLSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKI 1120
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQI---STL 498
+ L E +GHK + C + S DS + G +G+I W + + + + +
Sbjct: 1121 WSFELLSPLHELRGHKGC---VRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPI 1177
Query: 499 IHSVGKAV----VNSLCSHPTRKHIMSACGNNVKLW 530
+ G A V LC P K ++SA G +K W
Sbjct: 1178 LVEEGAATHGGWVTDLCFSPDSKMLVSA-GGYLKWW 1212
Score = 94 (38.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 27/101 (26%), Positives = 44/101 (43%)
Query: 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
+NL H V A + D +IAS DK++ +++ TG+ + + H +V C
Sbjct: 612 KNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCC 671
Query: 255 KFNEDSSVVISGSQDNTVMMWD------VKSRSHHPIQVRC 289
F+ D + + S D V +W+ V H QV C
Sbjct: 672 AFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNC 712
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 182 (69.1 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 35/101 (34%), Positives = 59/101 (58%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239
++C D + LW +N ++ GH + VND + D IAS + DKSV LW + GQ
Sbjct: 349 VSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQ 408
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ +R H V V ++ DS +++SGS+D+T+ +W V+++
Sbjct: 409 YMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK 449
Score = 145 (56.1 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 69/331 (20%), Positives = 137/331 (41%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG++ + D ++LW+ T GH V + A D ++ASG S+I
Sbjct: 127 FSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSII 186
Query: 232 LWEVTTGQ----PVRRWREHASKVTCVKFNEDSSV--VISGSQDNTVMMWDVKSRSHHPI 285
+W+ TGQ P+ ++H + + ++ D + S S D +WDVK +
Sbjct: 187 IWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKL-GQCLM 245
Query: 286 QVRCLNEALKEAR---DSITSVHSLVKSTKN-HLSNGLLTKLVFAFRCKYLNGLLSGVLM 341
+ A+ R + S ++ K ++G+L + F+ ++N + +
Sbjct: 246 NIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCR-TFSGHAHWVNN----IAL 300
Query: 342 STQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHE-ILTASLDCRI 400
ST +++ F + D + + S + + A +V + E +++ S D +
Sbjct: 301 STDYVLRTGPF---HPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTL 357
Query: 401 RRYDIRTGNLVTDYVGEPIV--DACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK 458
+ V G V D ++ D + I + S D+ +RL+ + G+ + ++GH
Sbjct: 358 YLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHV 417
Query: 459 SGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
+ + DS+ I GS D + W +
Sbjct: 418 QAVYTVAWSADSR--LIVSGSKDSTLKVWSV 446
Score = 136 (52.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 29/105 (27%), Positives = 48/105 (45%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
++ D + DK ++LW + T+ GH V + DS I SG+ D ++
Sbjct: 382 KYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTL 441
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
+W V T + + HA +V V + D S V SG +D + +W
Sbjct: 442 KVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 113 (44.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 29/94 (30%), Positives = 44/94 (46%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GHA V + D + +ASG+ D +V LW++ T P H V CV + D +
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRL 176
Query: 264 ISGSQDNTVMMWDV-----KSR--SHHPIQVRCL 290
SG + ++++WD K R S H + CL
Sbjct: 177 ASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCL 210
Score = 92 (37.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 28/124 (22%), Positives = 57/124 (45%)
Query: 368 NSCFQALKEARDSITSVHVS-DHEIL-TASLDCRIRRYDIRTGNLVTDYVG--EPIVDAC 423
N C + + ++ + V S D +++ +AS D +R + G + + G + +
Sbjct: 365 NKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVA 424
Query: 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGK 483
++ D + I++ S D L+++ T +L +E GH F ++ D S++ G D
Sbjct: 425 WSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDG--SRVASGGKDKV 482
Query: 484 IYKW 487
I W
Sbjct: 483 IKLW 486
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 174 (66.3 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 39/126 (30%), Positives = 58/126 (46%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + T DK IK+W+ YR L + H H V A + D I S + DK++
Sbjct: 68 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 127
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSRSHHPIQ-- 286
+W+ T Q V + + V FN + + S D TV +WDV K H+ +
Sbjct: 128 IWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG 187
Query: 287 -VRCLN 291
V C++
Sbjct: 188 GVNCIS 193
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 49/203 (24%), Positives = 91/203 (44%)
Query: 82 HDDFVRATQYVAPHCNGV-DLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRIL 140
H D V + Q+ +PH N + + R I + G K T P+ + L
Sbjct: 17 HKDVVTSVQF-SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 141 YELPKEWSIRVYRPLTVNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLWNPY 194
++ SI+V+ ++ R+ F+ S HT +F DG ++C DK IK+W+
Sbjct: 76 ATASEDKSIKVW---SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 132
Query: 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
+ + N + IAS SD++V +W+V + ++ ++ H+ V C+
Sbjct: 133 NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 192
Query: 255 KFNEDSSVVISGSQDNTVMMWDV 277
F+ + +I+ S D T+ + D+
Sbjct: 193 SFHPSGNYLITASSDGTLKILDL 215
Score = 142 (55.0 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G+ + D+ ++LW P + + H V + D +A+ + DKS+
Sbjct: 25 QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSI 84
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+W + + + H V C KF+ D +++S S+D T+ +WD ++
Sbjct: 85 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 134
Score = 117 (46.2 bits), Expect = 0.00093, P = 0.00093
Identities = 26/104 (25%), Positives = 52/104 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G+ + GSD+ +K+W+ N LL+ Y H+ VN + + + + +SD ++
Sbjct: 152 FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLK 211
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
+ ++ G+ + + H V V F++ + SG D V++W
Sbjct: 212 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 85 (35.0 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 37/150 (24%), Positives = 58/150 (38%)
Query: 391 ILTASLDCRIRRYDIRTGNLV---TDYVG-EPIVDACFTRDCQCILTCSTDECLRLFDKA 446
I++ S D I+ +D V +D VG VD F CI + +D+ ++++D
Sbjct: 117 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD--FNPSGTCIASAGSDQTVKVWDVR 174
Query: 447 TGELLEEYKGHKSGDFRIECC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 505
+LL+ Y+ H G + C + + SSDG + L++ I TL G
Sbjct: 175 VNKLLQHYQVHSGG---VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 231
Query: 506 VVNSLCSHPTRKHIMSACGNNVKLWTAEED 535
S S V LW D
Sbjct: 232 FTVSF-SKGGELFASGGADTQVLLWRTNFD 260
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 187 (70.9 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 94/390 (24%), Positives = 165/390 (42%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI--ASGASDKS 229
F D SY TC +DKK+K+W+ L+ TY H+ +VN S+ + A+G++D
Sbjct: 665 FSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF 724
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP-IQVR 288
+ LW++ + H + V +F+ D ++ S S D T+ +WDV+S + I V+
Sbjct: 725 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVK 784
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYL------NGLLSGVLMS 342
+ D V +VK + ++G K++ A + K L +GLL+ +
Sbjct: 785 ---RFFLSSEDPPEDVEVIVKCC-SWSADG--DKIIVAAKNKVLLFDIHTSGLLAEIHTG 838
Query: 343 TQHLMVLLDFLGSTQIGDVTPISIHNSCFQA------LKEA--RDSITSVH-----VSDH 389
+ DF + + I++ C + LK A R ++ VH
Sbjct: 839 HHSTIQYCDF---SPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGS 895
Query: 390 EILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGE 449
LTAS D IR ++ + + V + +D F + +L L+L TG+
Sbjct: 896 SFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ 955
Query: 450 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KAVVN 508
+ +Y CCL + G DG I +L ++ S+ VG K V
Sbjct: 956 I--DYLPEAQVSC---CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSS---GVGHKKAVR 1007
Query: 509 SLCSHPTRKHIMSACGNNV-KLWTAEE-DY 536
+ K ++S+ ++V ++W + DY
Sbjct: 1008 HIQFTADGKTLISSSEDSVIQVWNWQTGDY 1037
Score = 158 (60.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG +CG+DK ++++ L H EV + D S IA+ ++DK
Sbjct: 620 HACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADK 679
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSR 280
V +W+ TG+ V + EH+ +V C F S+ ++ +GS D + +WD+ +
Sbjct: 680 KVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK 733
Score = 151 (58.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 417 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC-LDSKDSQI 475
+ + ACF++D Q I +C D+ L++F TGE L + K H+ + CC S DS I
Sbjct: 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED---EVLCCAFSSDDSYI 672
Query: 476 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 530
S+D K+ W DS+ L+H+ + C H T K H++ A G+N +KLW
Sbjct: 673 ATCSADKKVKIW---DSAT-GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 337 SGVLMSTQHLMVLLD 351
SG+LM Q+L + LD
Sbjct: 193 SGLLMKLQNLCMRLD 207
>UNIPROTKB|J3QQL9 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC135056 HGNC:HGNC:30086
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
Ensembl:ENST00000577907 Uniprot:J3QQL9
Length = 152
Score = 144 (55.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 39/112 (34%), Positives = 55/112 (49%)
Query: 11 STLLKNLKHCDSTLWT-SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEF--STS 67
S L+ +H + + S+L +R L R H LC+TPM+ A F++ + R
Sbjct: 11 SRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVC 70
Query: 68 PEDTPLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCAL 119
PED PL+VQ A + A Y C+ +DLN GCPQ A + YG L
Sbjct: 71 PEDRPLIVQAA-------LLAQDY----CDAIDLNLGCPQMIAKRGHYGAFL 111
Score = 37 (18.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 367 HNSCFQALKEARDSITSVHVSDHEILTASLDCRIR 401
H F L++ D + + + HE L+ + C+IR
Sbjct: 106 HYGAF--LQDEWDLLQRMILLAHEKLSVPVTCKIR 138
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 156 (60.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 39/105 (37%), Positives = 56/105 (53%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ--IASGASDKSVILWEVT 236
L GS DK I++WN + TY GH+ D+ + DS Q I SG++DK+V +W V
Sbjct: 355 LITGSLDKTIRVWNYITGECISTYRGHS----DSVLSVDSYQKVIVSGSADKTVKVWHVE 410
Query: 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
+ + R H V CVK + S S S D T+ MWD+++ S
Sbjct: 411 S-RTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNS 454
Score = 148 (57.2 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 33/108 (30%), Positives = 59/108 (54%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D I +W+ + L++ GH+ V T D ++ +G+ DK++ +W TG
Sbjct: 315 LFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVK--TLYFDDRKLITGSLDKTIRVWNYITG 372
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 286
+ + +R H+ V V + V++SGS D TV +W V+SR+ + ++
Sbjct: 373 ECISTYRGHSDSVLSV--DSYQKVIVSGSADKTVKVWHVESRTCYTLR 418
Score = 71 (30.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATG 448
+L+ LD I+ +D++TG + G E + D D I++ S D ++++D +G
Sbjct: 525 LLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWD--IAADNFRIISGSHDGSIKVWDLQSG 582
Query: 449 ELLEEYKGHKS------------GDFRIE--CCLDSKDSQIFCGSSDG--KIYKWQLVD 491
+ + + G + GD ++ C+ DS+ F G G K+YK+ L D
Sbjct: 583 KCMHTFNGRRLQRETQHTQTQSLGD-KVAPIACVCIGDSECFSGDEFGCVKMYKFDLND 640
Score = 44 (20.5 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 30 NFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQ 76
NF + HN D+ F+P A K R E + + PL Q
Sbjct: 90 NFTKFCYRHNPDIQFSPTHTA--CYKQDLKRTQEINANIAKLPLQEQ 134
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
TRF D S L+C D I+ W+ + N +L Y GHA+ V D + S ASG+ D
Sbjct: 348 TRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDLDISPYSLYFASGSHD 405
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
++ LW P+R + H + V CVKF+ +S+ + +GS D TV +W +
Sbjct: 406 RTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Score = 169 (64.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 36/134 (26%), Positives = 69/134 (51%)
Query: 147 WSI-RVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH 205
WS R Y PL + L+ + +F + +Y T +DK ++LW+ + ++ + GH
Sbjct: 411 WSFDRTY-PLRIYAGH--LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 467
Query: 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVIS 265
V + + +AS D+ + LW++ +G + R H +T + F+ DS ++ S
Sbjct: 468 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIAS 527
Query: 266 GSQDNTVMMWDVKS 279
S DN+V +WD+++
Sbjct: 528 ASMDNSVRVWDIRN 541
Score = 142 (55.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 183 GS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPV 241
GS D+ +LW+ R L+ Y GH +V+ +S+ +A+G++DK+V LW G V
Sbjct: 402 GSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV 461
Query: 242 RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
R + H V + F+ + + S +D + +WD+ S
Sbjct: 462 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 499
Score = 108 (43.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRL 442
H + + + T S D +R + + GN V + G P++ F+ + + + + D+ L+L
Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKL 494
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 489
+D A+G L +E +GH I S DS + +S D + W +
Sbjct: 495 WDLASGTLYKELRGHTDN---ITSLTFSPDSGLIASASMDNSVRVWDI 539
Score = 85 (35.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 167 LMHTRFPVDGSYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
L++T S L G D IKLW+ R+ LK+ H +V+ ACD +
Sbjct: 270 LLNTAEISPDSKLLAAGFDNSCIKLWS-LRSKKLKSEP-HQVDVSRIHLACDILEEEDDE 327
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D + G ++ R H V +F DSS ++S S+D ++ WD+ S
Sbjct: 328 DDNA--------GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS 373
Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 20/81 (24%), Positives = 33/81 (40%)
Query: 9 NRSTLLKNLK-HCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTS 67
N T +K L+ HC T L + S + D+ + SF + + + +
Sbjct: 330 NAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVW 388
Query: 68 PED-TPLVVQFASNNHDDFVR 87
D +P + FAS +HD R
Sbjct: 389 DLDISPYSLYFASGSHDRTAR 409
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 174 (66.3 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 39/126 (30%), Positives = 58/126 (46%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + T DK IK+W+ YR L + H H V A + D I S + DK++
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSRSHHPIQ-- 286
+W+ T Q V + + V FN + + S D TV +WDV K H+ +
Sbjct: 170 IWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG 229
Query: 287 -VRCLN 291
V C++
Sbjct: 230 GVNCIS 235
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 49/203 (24%), Positives = 91/203 (44%)
Query: 82 HDDFVRATQYVAPHCNGV-DLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRIL 140
H D V + Q+ +PH N + + R I + G K T P+ + L
Sbjct: 59 HKDVVTSVQF-SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 117
Query: 141 YELPKEWSIRVYRPLTVNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLWNPY 194
++ SI+V+ ++ R+ F+ S HT +F DG ++C DK IK+W+
Sbjct: 118 ATASEDKSIKVW---SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174
Query: 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
+ + N + IAS SD++V +W+V + ++ ++ H+ V C+
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 234
Query: 255 KFNEDSSVVISGSQDNTVMMWDV 277
F+ + +I+ S D T+ + D+
Sbjct: 235 SFHPSGNYLITASSDGTLKILDL 257
Score = 142 (55.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G+ + D+ ++LW P + + H V + D +A+ + DKS+
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSI 126
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+W + + + H V C KF+ D +++S S+D T+ +WD ++
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Score = 95 (38.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 197 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF 256
+L + + GH + + + Q+A+ + D ++LW R+ H VT V+F
Sbjct: 9 VLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQF 68
Query: 257 NEDSSVVISGSQDNTVMMW 275
+ +++ S S+D TV +W
Sbjct: 69 SPHGNLLASASRDRTVRLW 87
Score = 85 (35.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 37/150 (24%), Positives = 58/150 (38%)
Query: 391 ILTASLDCRIRRYDIRTGNLV---TDYVG-EPIVDACFTRDCQCILTCSTDECLRLFDKA 446
I++ S D I+ +D V +D VG VD F CI + +D+ ++++D
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD--FNPSGTCIASAGSDQTVKVWDVR 216
Query: 447 TGELLEEYKGHKSGDFRIECC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 505
+LL+ Y+ H G + C + + SSDG + L++ I TL G
Sbjct: 217 VNKLLQHYQVHSGG---VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Query: 506 VVNSLCSHPTRKHIMSACGNNVKLWTAEED 535
S S V LW D
Sbjct: 274 FTVSF-SKGGELFASGGADTQVLLWRTNFD 302
Score = 72 (30.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 39/157 (24%), Positives = 69/157 (43%)
Query: 371 FQALKEARDSITSVHVS-DHEIL-TASLDCRIRRYDI-RTGNLVTDYVGEPIVD-ACFTR 426
F K + SV S D + L TAS D I+ + + R L + Y V A F+
Sbjct: 95 FSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 427 DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK 486
D + I++CS D+ ++++D + + + S F + + I SD +
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSD--SVGFANFVDFNPSGTCIASAGSDQTVKV 212
Query: 487 WQL-VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 522
W + V+ +HS G VN + HP+ ++++A
Sbjct: 213 WDVRVNKLLQHYQVHSGG---VNCISFHPSGNYLITA 246
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
RF G Y ++C DK +LW N L+ + GH +V+ +S+ +A+G+SD++V
Sbjct: 499 RFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTV 558
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
LW+ TGQ VR H V+ + F+ + SGS D+ +++WD+ + S
Sbjct: 559 RLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGS 609
Score = 169 (64.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 47/143 (32%), Positives = 71/143 (49%)
Query: 140 LYELPKEWS---IRVY--RPLTVNRELFVLSGLMHT-RFPVDGSYCLTCGSDKKIKLWNP 193
L EL KE + +R+ R V R L +G ++ F + + L+C D I+LW+
Sbjct: 420 LRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSL 479
Query: 194 YRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTC 253
+ TY GH + V D A S + DK+ LW + Q +R + H S V C
Sbjct: 480 LTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDC 539
Query: 254 VKFNEDSSVVISGSQDNTVMMWD 276
V+F+ +S+ V +GS D TV +WD
Sbjct: 540 VQFHPNSNYVATGSSDRTVRLWD 562
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVND-ATAACDSSQIA 222
LS + +F + +Y T SD+ ++LW+ ++ GH V+ A +AC +A
Sbjct: 534 LSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSAC-GRYLA 592
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
SG+ D ++I+W+++ G V H S VT + F+ D +V+ + DN + +WD
Sbjct: 593 SGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 71/300 (23%), Positives = 124/300 (41%)
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEA--LKEARDSITSVH-SL 307
VTC + ++DS+++ G D++V +W + P ++R L +A L+E ++ +
Sbjct: 380 VTCAEISDDSTMLACGFGDSSVRIWSLT-----PAKLRTLKDADSLRELDKESADINVRM 434
Query: 308 VKSTKNHLSNGLLTKLVFAFRCKY---LNGLLSGVLMSTQHLMVLLDF-LGSTQIGDVTP 363
+ ++ L+ +RC + +N LLS ST L LL + T G V P
Sbjct: 435 LDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYP 494
Query: 364 ISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE-PIVDA 422
+ D + H + ++ S D R + + + +VG VD
Sbjct: 495 VW-------------DVRFAPH--GYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDC 539
Query: 423 C-FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD 481
F + + T S+D +RL+D TG+ + GHK + + + GS D
Sbjct: 540 VQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSL--AFSACGRYLASGSVD 597
Query: 482 GKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLWT---AEEDY 536
I W L + S ++TL+ + T +++A G NN+ LW EDY
Sbjct: 598 HNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGT---VLAAAGLDNNLTLWDFHKVTEDY 654
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 37/108 (34%), Positives = 56/108 (51%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + SD I+LW+ R+ L GH V + + DS Q+ASG DK I
Sbjct: 76 FSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAI 135
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+WEV +G+ V H + F+ S + +GS D+TV +WD+++
Sbjct: 136 VWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRA 183
Score = 153 (58.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 50/167 (29%), Positives = 73/167 (43%)
Query: 146 EWS---IRVYRPLTVNRELFVLSGLMH-----TRFPVDGSYCLTCGSDKKIKLWNPYRNL 197
EW+ IR L V R F G H + F DG LT D + +W
Sbjct: 2 EWAPMNIRAPTRLAVGRVRFY--GQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGR 59
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
LL GH V + D IAS +SD S+ LW+V + + + H V V F+
Sbjct: 60 LLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFS 119
Query: 258 EDSSVVISGSQDNTVMMWDVKS-RSHHPIQVRCLNEALKEARDSITS 303
DS + SG D ++W+V+S R H + C ++++ + S TS
Sbjct: 120 PDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHC--DSIQSSDFSPTS 164
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 68/274 (24%), Positives = 120/274 (43%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
++ YG H EVN + + D + + + D V +W +G+ + R H V F+
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP 78
Query: 259 DSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNG 318
D ++ S S D+++ +WDV +RS +CL+ LK + S+ +V S +K S G
Sbjct: 79 DGRLIASSSSDHSIRLWDV-ARS------KCLH-VLKGHQRSVETV-SFSPDSKQLASGG 129
Query: 319 -----LLTKLVFAFRCKYLNGLLSGVLMS----TQHLMVLLDFLGSTQIGDV---TPI-S 365
++ ++ R L G + S T + + + I D+ TP+ S
Sbjct: 130 WDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVS 189
Query: 366 IHNSCFQALKEARDSITSVHVSDHEILTA-SLDCRIRRYDIRTGNLVTDYVGEPI-VDA- 422
HN L+ +I+ + S +L + S D I + T NL G I V++
Sbjct: 190 YHN-----LEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSL 244
Query: 423 CFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 456
F+ D + + ++++D TG+ LE KG
Sbjct: 245 AFSPDELKLASAGYSRTVKVWDCLTGKCLETLKG 278
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 31/111 (27%), Positives = 54/111 (48%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATG 448
+LTAS D + + ++G L+ G P+ CF+ D + I + S+D +RL+D A
Sbjct: 41 LLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARS 100
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 499
+ L KGH+ + DSK Q+ G D + W++ ++ L+
Sbjct: 101 KCLHVLKGHQRSVETVSFSPDSK--QLASGGWDKRAIVWEVQSGRRVHLLV 149
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 161 (61.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 38/118 (32%), Positives = 64/118 (54%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAAC-----DSSQIA 222
RF DG Y +T D I++WN + K A + + D C D+ +A
Sbjct: 221 RFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLA 280
Query: 223 SGASDKSVILWEVTTGQPVRRW-REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+GA D + +W++ +GQ +RR+ R H+ VTC+ F++DS+ ++S S D T+ + +KS
Sbjct: 281 TGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKS 338
Score = 127 (49.8 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-GHAHEVNDATAACDSSQIASGASDKSV 230
F D T D KIK+W L+ Y H+ V + + DS+QI S + D+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQILSASFDQTI 331
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ + +G+ ++ +R H+S V D IS S D TV +W++K+
Sbjct: 332 RIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNMKT 380
Score = 65 (27.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 40/186 (21%), Positives = 79/186 (42%)
Query: 364 ISIHN-SCFQALKEARDSITSVHVSD-----HEILTASLDCRIRRYDIRTGNLVTDY--- 414
I IH + LKE R + V+ + H ++AS D ++ ++++T + +
Sbjct: 331 IRIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNMKTTECTSTFKSL 390
Query: 415 ---VGEPI-VD--ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SGDFRIEC 466
G I V+ ++ + + C+ + + + G+++ + K GDF + C
Sbjct: 391 GTSAGTDITVNNVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIVRSFSSGKREGGDF-VCC 448
Query: 467 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGN 525
L + I+C D +Y + V TL +H K V+ + HP + I + +
Sbjct: 449 TLSPRGEWIYCVGEDYVLYCFSTVTGKLERTLTVHE--KDVIG-IAHHPHQNLIGTYSED 505
Query: 526 NV-KLW 530
+ KLW
Sbjct: 506 GLLKLW 511
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + +D IKLW+P L T GH++++ + + +ASG+SD ++
Sbjct: 205 FSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIK 264
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
LW+ TG + H+ V V F+ DS ++ SGS DNT+ +WD
Sbjct: 265 LWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 173 (66.0 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 78/306 (25%), Positives = 127/306 (41%)
Query: 191 WNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK 250
W P L+T GH+ + T + D +ASG++D ++ LW+ +G + H+S
Sbjct: 30 WGPE----LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSS 85
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310
V V F+ + ++ SGS D T+ +W+ S S L ++ D + SV S
Sbjct: 86 VQSVAFSPNGQLLASGSSDTTIKLWNSASDS--------LKHTMEGHSDRVESV---AFS 134
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSC 370
L N + L + + +LS L+ GS + I + +S
Sbjct: 135 PNGQLWNPAIGSLKHTIE-GHSDWVLSVAFSPDGQLLAS----GSAE----KTIKLWDSA 185
Query: 371 FQALKEARDSITS-----VHVSDHEILTA-SLDCRIRRYDIRTGNLVTDYVGEP--IVDA 422
LK ++ V D +L + S D I+ +D +G+L G I
Sbjct: 186 TCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESL 245
Query: 423 CFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSD 481
F+ + Q + + S+D ++L+D ATG KGH D + S DSQ+ GS D
Sbjct: 246 AFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHS--DMVLSVVF-SPDSQLLESGSGD 302
Query: 482 GKIYKW 487
I W
Sbjct: 303 NTIKLW 308
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 34/121 (28%), Positives = 63/121 (52%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
++ F DG + ++K IKLW+ L T GGH++ V + D +ASG++
Sbjct: 158 VLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSN 217
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-HHPI 285
D ++ LW+ +G H++K+ + F+ + ++ SGS D T+ +WD + S H +
Sbjct: 218 DATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTL 277
Query: 286 Q 286
+
Sbjct: 278 K 278
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 74/301 (24%), Positives = 127/301 (42%)
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEA 297
G ++ H+ + V F+ D ++ SGS D T+ +WD S L + L E
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGG--------LKQTL-EG 81
Query: 298 RDSITSVHSLVKSTKNHL-SNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356
S SV S+ S L ++G + K N + + + ++ + +
Sbjct: 82 HSS--SVQSVAFSPNGQLLASGSSDTTI-----KLWNSASDSLKHTMEGHSDRVESVAFS 134
Query: 357 QIGDVTPISIHNSCFQALKEARDSITSVHVS-DHEILTA-SLDCRIRRYDIRTGNLVTDY 414
G + +I S ++ D + SV S D ++L + S + I+ +D T L
Sbjct: 135 PNGQLWNPAI-GSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTL 193
Query: 415 VGEP--IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKD 472
G ++ F+ D + + + S D ++L+D +G L +GH + +IE S +
Sbjct: 194 GGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSN---KIESLAFSPN 250
Query: 473 SQIFC-GSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNN-VKL 529
Q+ GSSD I W S TL HS +V S+ P + + S G+N +KL
Sbjct: 251 GQLLASGSSDATIKLWDTATGSFRHTLKGHS---DMVLSVVFSPDSQLLESGSGDNTIKL 307
Query: 530 W 530
W
Sbjct: 308 W 308
Score = 132 (51.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 189 KLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHA 248
+LWNP L T GH+ V + D +ASG+++K++ LW+ T H+
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 249 SKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-HHPIQ 286
+ V + F+ D ++ SGS D T+ +WD S S H ++
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE 236
Score = 112 (44.5 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + +D IKLW+P L +T GH+ V + + +ASG+SD ++
Sbjct: 49 FSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIK 108
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSV 262
LW + H+ +V V F+ + +
Sbjct: 109 LWNSASDSLKHTMEGHSDRVESVAFSPNGQL 139
Score = 105 (42.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 31/112 (27%), Positives = 46/112 (41%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 224
S + F +G + SD IKLWN + L T GH+ V ++ A + Q
Sbjct: 84 SSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRV-ESVAFSPNGQ---- 138
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
LW G H+ V V F+ D ++ SGS + T+ +WD
Sbjct: 139 -------LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD 183
Score = 68 (29.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATG 448
+ + S D I+ +D TG+ G + ++ F+ D Q + + S D ++L+D ATG
Sbjct: 254 LASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATG 313
Query: 449 EL 450
L
Sbjct: 314 IL 315
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 35/107 (32%), Positives = 53/107 (49%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG + T DK IK+WN YR L + H H V A + D I S + DK++
Sbjct: 110 FSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+W+ T Q V + + V FN + + + S D+TV +WD++
Sbjct: 170 IWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIR 216
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 148 SIRVYRPLTVNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKT 201
SI+V+ + R+ F+ S HT +F DG ++C DK IK+W+ +
Sbjct: 125 SIKVWN---MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS 261
+ N + + IAS SD +V +W++ + ++ ++ H+ V CV F+ +
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN 241
Query: 262 VVISGSQDNTVMMWDV 277
+I+ S D T+ + D+
Sbjct: 242 YIITASSDGTLKILDL 257
Score = 137 (53.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 25/105 (23%), Positives = 50/105 (47%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G+ + D+ ++LW P + + H V + D +A+ + DKS+ +W +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + H V C KF+ D +++S S+D T+ +WD ++
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 66/301 (21%), Positives = 127/301 (42%)
Query: 197 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF 256
+L + + GH + + Q+A+ + D ++LW R+ H VT V+F
Sbjct: 9 VLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQF 68
Query: 257 NEDSSVVISGSQDNTVMMW--DVKSRSH----HPIQVRCLNEALKEARDSITSVHSLVKS 310
+ +++ S S+D TV +W D + +S H VR ++ + A + S KS
Sbjct: 69 SPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFS---ADGQFLATASEDKS 125
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSC 370
K + N + +++ ++ + + L+V + +I D T N+
Sbjct: 126 IK--VWNMYRQRFLYSLY-RHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 371 FQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FTRDC 428
++ A + + + I +A D ++ +DIR L+ Y V V+ F
Sbjct: 183 SDSVGFA--NFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Query: 429 QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKW 487
I+T S+D L++ D G L+ +GH F + SK ++F G +D ++ W
Sbjct: 241 NYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF---SKGGELFSSGGADTQVLLW 297
Query: 488 Q 488
+
Sbjct: 298 R 298
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F +G+ + GSD +K+W+ N LL+ Y H+ VN + + I + +SD ++
Sbjct: 194 FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLK 253
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
+ ++ G+ + + H V V F++ + SG D V++W
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 157 (60.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 27/95 (28%), Positives = 53/95 (55%)
Query: 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 244
DK ++LW+ + ++ + GH V + + + +AS D+ + LW++ +G +
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 245 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
R H +T + F+ DS ++ S S DN+V +WD++S
Sbjct: 61 RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 95
Score = 113 (44.8 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F +G Y + G D+++KLW+ L K GH + + DS IAS + D SV
Sbjct: 30 FSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVR 89
Query: 232 LWEV-----------TTGQPVRRWREHASKVTCVKFNEDSSVVISG-SQDN 270
+W++ ++G+ V + S V V+F + ++++G +Q+N
Sbjct: 90 VWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQEN 140
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 140 (54.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 160 ELFVLSG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG---GHAHEVNDATAA 215
EL SG + RF + + D+ I LWN Y + YG GH + D +
Sbjct: 61 ELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQC--ENYGILSGHKGAILDLQWS 118
Query: 216 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE-DSSVVISGSQDNTVMM 274
DS I S ++D ++ W++ +GQ +RR+ H + V+ ++ +++S S D T+ +
Sbjct: 119 RDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGI 178
Query: 275 WDVKSR 280
WD + +
Sbjct: 179 WDPRQK 184
Score = 99 (39.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 25/124 (20%), Positives = 55/124 (44%)
Query: 163 VLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 218
+LSG ++ ++ D + +D + W+ ++ Y GH +N +
Sbjct: 104 ILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRG 163
Query: 219 SQIASGASDKSVI-LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
++ ASD + +W+ + + + E +T V +E + V SG DN + +WD+
Sbjct: 164 QEMLVSASDDGTMGIWDPRQKEAID-YLETELPITAVAQSEAGNEVFSGGIDNAIHVWDI 222
Query: 278 KSRS 281
+ ++
Sbjct: 223 RKKA 226
Score = 81 (33.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 379 DSITSVHVS-DHE-ILTASLDCRIRRYDIR----TGNLVTDYVGEPI------VDACFTR 426
D+ITS+ VS D + +L+ S D +R +DIR T + Y G P+ + A +
Sbjct: 236 DTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNP 295
Query: 427 DCQCILTCSTDECLRLFDKATGELLEEYKGHK 458
I S D + ++D TG++L + GHK
Sbjct: 296 AGDKIAAGSGDRSVVVWDFKTGKILYKLPGHK 327
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 182 (69.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 33/112 (29%), Positives = 64/112 (57%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F + +Y T SDK ++W+ + ++ + GH + VN + D +ASG D +
Sbjct: 609 FHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIIC 668
Query: 232 LWEVTTGQPVRRWREHA-SKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+W++ +G+ ++ R HA + + + F+ D +V++SG DN+V +WDVK ++
Sbjct: 669 VWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTN 720
Score = 179 (68.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 152 YRPLTVNRELFVLSGLMH-TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVN 210
++P R+L SG ++ F D Y L+C DK ++LW+ L +Y GH V
Sbjct: 504 HKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVW 563
Query: 211 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 270
D + + + D++ LW P+R + H + V CV+F+ +S+ V +GS D
Sbjct: 564 DVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDK 623
Query: 271 TVMMWDV 277
T MWDV
Sbjct: 624 TCRMWDV 630
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
WS+ Y L + + +F G Y +T D+ +LW L+ + GH
Sbjct: 544 WSLDTYTALVSYKGH--TQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHI 601
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
++V+ +S+ + +G+SDK+ +W+V TG VR + H + V C+ + D + SG
Sbjct: 602 NDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASG 661
Query: 267 SQDNTVMMWDVKS 279
+D + +WD+ S
Sbjct: 662 GEDGIICVWDIGS 674
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 147 WSI-RVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH 205
WS R Y PL + L+G+ +F + +Y T +DK ++LW+ + ++ + GH
Sbjct: 408 WSFDRTY-PLRIYAGH--LAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 464
Query: 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVIS 265
V + + + S D+ + LW++ +G + H +T V F+ DSSV+ S
Sbjct: 465 CGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIAS 524
Query: 266 GSQDNTVMMWDVKSR 280
S DN+V +WD+KS+
Sbjct: 525 ASMDNSVRIWDIKSK 539
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 45/129 (34%), Positives = 65/129 (50%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
TRF D S L+C D I+ W+ + N +L Y GHA+ V D + S AS + D
Sbjct: 345 TRFLPDSSALLSCSEDTSIRYWDLESFTNTVL--YQGHAYPVWDLDISPHSLFFASASYD 402
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD------VKSRS 281
+ LW P+R + H + V CVKF+ +S+ + +GS D TV +W V+ +
Sbjct: 403 HTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT 462
Query: 282 HHPIQVRCL 290
H VRCL
Sbjct: 463 GHCGPVRCL 471
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H+ F SY D +LW+ R L+ Y GH V+ +S+ +A+G++DK
Sbjct: 392 HSLFFASASY------DHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDK 445
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+V LW G VR + H V C+ F+ + ++S +D + +WD+ S
Sbjct: 446 TVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLAS 496
Score = 111 (44.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 32/115 (27%), Positives = 54/115 (46%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRL 442
H + + + T S D +R + + GN V + G P+ F+ + Q +++ D+ L+L
Sbjct: 432 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKL 491
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIST 497
+D A+G L ++ GH + LDS S I S D + W + S ST
Sbjct: 492 WDLASGTLYKDLHGHTDDITSVTFSLDS--SVIASASMDNSVRIWD-IKSKHNST 543
Score = 56 (24.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 209 VNDATAACDSSQIASGASDKSVILWEVTT 237
+N A A+ D+ +A+G ++ S+ LW +T+
Sbjct: 271 LNTAEASPDNKLLATGLNNSSIKLWSLTS 299
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 153 (58.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 35/138 (25%), Positives = 65/138 (47%)
Query: 145 KEWSI---RVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKT 201
K W + ++ R LT +R S + F G + + D +K+W+ + + T
Sbjct: 84 KLWDLEEAKIVRTLTGHR-----SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS 261
Y GH VN D + SG D V +W++T G+ + ++ H ++ + F+
Sbjct: 139 YKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEF 198
Query: 262 VVISGSQDNTVMMWDVKS 279
++ +GS D TV WD+++
Sbjct: 199 LLATGSADRTVKFWDLET 216
Score = 134 (52.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G+ RF DG + ++ G D +K+W+ LL + H ++ +A+G+
Sbjct: 145 GVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGS 204
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT-VMMWDVKSRSHHP 284
+D++V W++ T + + + V C+ FN D V+ G Q++ + W+ R H
Sbjct: 205 ADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE-PIRCHDG 263
Query: 285 IQV 287
+ V
Sbjct: 264 VDV 266
Score = 132 (51.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 180 LTCGSDKKIKLWNPYR-NLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
+T G D K+ LW + N +L YG H+ ++ T +A+GA+ ++ LW++
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYG-HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEA 91
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ VR H S V F+ SGS D + +WD++ +
Sbjct: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
Score = 100 (40.3 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 393 TASLDCRIRRYDIRTGNLVTDYVGEPI-VDAC-FTRDCQCILTCSTDECLRLFDKATGEL 450
+ SLD ++ +DIR + Y G V+ FT D + +++ D ++++D G+L
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL 177
Query: 451 LEEYKGHKSGDFRIECCLDSKDSQIFC--GSSDGKIYKWQLVDSSQISTLIHSVGK--AV 506
L E+K H+ +I+ LD + GS+D + W L + LI S G A
Sbjct: 178 LTEFKSHEG---QIQS-LDFHPHEFLLATGSADRTVKFWDL----ETFELIGSGGPETAG 229
Query: 507 VNSLCSHPTRKHIMSACGNNVKLWTAE 533
V L +P K ++ ++K+++ E
Sbjct: 230 VRCLSFNPDGKTVLCGLQESLKIFSWE 256
Score = 89 (36.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 199 LKTYGGHAHEVNDATAACDSSQI-ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L+ + H+ VN SS++ +G D V LW + + H+S + V F+
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 258 EDSSVVISGSQDNTVMMWDVK 278
+V +G+ T+ +WD++
Sbjct: 69 ASEVLVAAGAASGTIKLWDLE 89
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/201 (28%), Positives = 96/201 (47%)
Query: 158 NRELFVLSGLMHTRFPVDG-------SYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVN 210
N L S + HTR PV G + L+C D +LW+ + Y GH +
Sbjct: 391 NEPLQKSSLIGHTR-PVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIW 449
Query: 211 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 270
D + A+ + D++ LW+V P+R + H + V CV F+ +++ + +GS D+
Sbjct: 450 DVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDH 509
Query: 271 TVMMWDVKS-------RSHH-PIQVRCLNE---ALKEARDS-ITSVHSLVKSTKNHLSNG 318
T MWDV++ +HH P+ C++ +L A +S I V L +S+ H+S
Sbjct: 510 TTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDL-RSSNQHVSFV 568
Query: 319 LLTKLVFAFRCKYLNGLL-SG 338
+ +V++ Y N +L SG
Sbjct: 569 KHSSIVYSLSFSYDNKILVSG 589
Score = 159 (61.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 43/170 (25%), Positives = 86/170 (50%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G Y T D+ +LW+ L+ + GH ++V+ + +++ +A+G+SD +
Sbjct: 452 QFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTT 511
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR-- 288
+W+V TG VR + H S V+ + + D + S + + +WD++S + H V+
Sbjct: 512 RMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHS 571
Query: 289 CLNEALKEARDSI--------TSVHSLVKSTKNHLSNGLLTKLVFAFRCK 330
+ +L + D+ T V+ + +N+LS+G + L+F F+ K
Sbjct: 572 SIVYSLSFSYDNKILVSGGADTDVNFWDLTYRNNLSDGEQSPLLFNFKTK 621
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 163 (62.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 39/120 (32%), Positives = 61/120 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPY-RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
FP L+C D KIKLW Y R +++TY GH V + + ++ S + D+ V
Sbjct: 284 FPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYV 343
Query: 231 ILWEVTTGQPVRRWREHASKVT-CVKFNEDSS---VVISGSQDNTVMMWDVKSRSHHPIQ 286
LW+ TGQ +R+ H V C+K++ D + + G Q+ ++ WD SRS +Q
Sbjct: 344 KLWDTETGQVKQRF--HTGHVPYCLKYHPDDDKNHMFLVGMQNKKIIQWD--SRSGEIVQ 399
Score = 111 (44.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 44/237 (18%), Positives = 94/237 (39%)
Query: 51 DSFIKSSKARNNEFSTSPEDTPLVVQFASNNH----DDFVRATQYVAPHCNGVDLNCG-C 105
D +K + ++ F ED+ + + +S H +D+ + V P GV+L
Sbjct: 198 DEIVKKRQEKSRRFKKEKEDSEQMAEESSTLHLKEAEDYQGRSFLVPPSFTGVNLREDYV 257
Query: 106 PQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLS 165
P+R + + + L P++ + + I+++ R + +
Sbjct: 258 PERCFVPKKLVHTYRGHNKGVNFLQWFPKS-AHLFLSCSMDTKIKLWEVYDRQRVVRTYA 316
Query: 166 G----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-GHAHEVNDATAACDSSQ 220
G + F +G+ L+ D+ +KLW+ + + + GH D +
Sbjct: 317 GHKLPVREVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRFHTGHVPYCLKYHPDDDKNH 376
Query: 221 I-ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
+ G +K +I W+ +G+ V+ + H V + F + + S S D +V +W+
Sbjct: 377 MFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVNSITFFDKNRRFASTSDDKSVRIWE 433
Score = 62 (26.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 29/116 (25%), Positives = 50/116 (43%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477
+V C D + +L D+ LR F K + ++GH + + C +D Q F
Sbjct: 463 VVGQCM--DNRIVLFQLVDDKLR-FSKK-----KAFRGHNAAGYA--CNIDFSPDQSFLI 512
Query: 478 -GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 530
G +DGK++ W + +I + + +L HP K M G + +K+W
Sbjct: 513 SGDADGKLFIWDW-RTHKIVGKWKAHDSTCIAALW-HPHEKSRMITAGWDGLIKMW 566
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/103 (35%), Positives = 59/103 (57%)
Query: 180 LTCGSDK-KIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
L GSD + LW+P + L GH +N + DS IAS + DKS+ LW+ T
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRT 404
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
G+ + R H + V + ++ DS +++SGS D+T+ +WDVK++
Sbjct: 405 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 447
Score = 129 (50.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 47/185 (25%), Positives = 80/185 (43%)
Query: 128 LLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFV------LSG----LMHTRFPVDGS 177
++ SL RT+ E K I +Y+P + R V L G ++ F G
Sbjct: 70 IVSSLGRTLESQAVETEKVLDI-IYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGK 128
Query: 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
Y + D ++ W+ T GH H V + + D ++ASG + ++LW+ +T
Sbjct: 129 YLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST 188
Query: 238 GQPV-RRWREHASKVTCVKF-----NEDSSVVISGSQDNTVMMWDV------KSRSHHPI 285
G+ V R H+ +T + + N + V S S+D +V +WD ++ + H
Sbjct: 189 GKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQ 248
Query: 286 QVRCL 290
V CL
Sbjct: 249 SVTCL 253
Score = 127 (49.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 30/104 (28%), Positives = 47/104 (45%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D + DK IKLW+ L + GH V + DS + SG+SD ++
Sbjct: 381 FSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 440
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
+W+V + HA +V V ++ D V SG +D + +W
Sbjct: 441 VWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 118 (46.6 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLL-KTYGGHAHEVNDAT-----AACDSSQIASGASDK 228
DG + + +I LW+P + + GH+ + + A + +AS + D
Sbjct: 168 DGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDG 227
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR 288
SV +W+ T G+ R HA VTC+++ D ++ S SQD T+ +W R+H + R
Sbjct: 228 SVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVW----RAHDGVLCR 282
Query: 289 CL 290
L
Sbjct: 283 TL 284
Score = 97 (39.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 38/139 (27%), Positives = 68/139 (48%)
Query: 145 KEWSIRVYRPLTVNRELFVLSGLMHT----RFPVDGSYCLTCGSDKKIKLWNPYRNLLLK 200
K+ S+RV+ T R L+G + R+ DG + D+ IK+W + +L +
Sbjct: 225 KDGSVRVW-DTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCR 282
Query: 201 TYGGHAHEVNDATAACDSSQIASGA---SDKSVILWEVTTGQPVRRWREHA-SKVTCVKF 256
T GH H VN + D + + +GA ++ SV ++ G ++ +E A S+ V+
Sbjct: 283 TLQGHGHWVNTMALSTDYA-LRTGAFEPAEASVNAQDLR-GS-LQELKERALSRYNLVR- 338
Query: 257 NEDSSVVISGSQDNTVMMW 275
+ ++SGS D T+ +W
Sbjct: 339 GQGPERLVSGSDDFTLFLW 357
Score = 96 (38.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGK 483
F+ D + I + S D+ ++L+D TG+ L +GH + ++I DS+ + GSSD
Sbjct: 381 FSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR--LLVSGSSDST 438
Query: 484 IYKWQLVDSSQIST 497
+ W V + ++ST
Sbjct: 439 LKVWD-VKAQKLST 451
Score = 79 (32.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/100 (22%), Positives = 47/100 (47%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATG 448
I +AS D I+ +D RTG + G + ++ D + +++ S+D L+++D
Sbjct: 388 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 447
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
+L + GH + ++ D + ++ G D + W+
Sbjct: 448 KLSTDLPGHADEVYAVDWSPDGQ--RVASGGKDKCLRIWR 485
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 178 (67.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 42/159 (26%), Positives = 80/159 (50%)
Query: 147 WSI-RVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH 205
WS R Y PL + LS + +F + +Y T +DK ++LW+ + ++ + GH
Sbjct: 423 WSFARTY-PLRLYAGH--LSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGH 479
Query: 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVIS 265
V + + +AS D+ + LW++ +G + R H ++ + F++DSS+V S
Sbjct: 480 RGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVAS 539
Query: 266 GSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSV 304
S DNTV +WD+++ C +E + + S +++
Sbjct: 540 ASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNI 578
Score = 174 (66.3 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 38/117 (32%), Positives = 62/117 (52%)
Query: 165 SGLMH-TRFPVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQI 221
SG ++ T F D S L+C D ++ W+ + N +L Y GHA+ V D + S
Sbjct: 354 SGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVL--YRGHAYPVWDVDVSPCSLYF 411
Query: 222 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
++ + D++ LW P+R + H S V CVKF+ +S+ + +GS D TV +W +
Sbjct: 412 STASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTR 468
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
Y T D+ +LW+ R L+ Y GH +V+ +S+ IA+G++DK+V LW
Sbjct: 410 YFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQ 469
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
G VR + H V + F+ + + S +D + +WD+ S
Sbjct: 470 GASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLAS 511
>SGD|S000004545 [details] [associations]
symbol:DUS1 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA;IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0002943 "tRNA
dihydrouridine synthesis" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 SGD:S000004545
GO:GO:0005634 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:BK006946
EMBL:Z46373 eggNOG:COG0042 HOGENOM:HOG000203649 KO:K05542
GO:GO:0017150 PANTHER:PTHR11082 GeneTree:ENSGT00550000075089
OMA:RCQPYFR OrthoDB:EOG480N5B PIR:S48817 RefSeq:NP_013631.1
ProteinModelPortal:P53759 SMR:P53759 IntAct:P53759
MINT:MINT-4083769 STRING:P53759 PaxDb:P53759 PeptideAtlas:P53759
EnsemblFungi:YML080W GeneID:854895 KEGG:sce:YML080W CYGD:YML080w
BioCyc:MetaCyc:MONOMER-16676 NextBio:977861 Genevestigator:P53759
GermOnline:YML080W Uniprot:P53759
Length = 423
Score = 175 (66.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 47/129 (36%), Positives = 71/129 (55%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFST---SPEDTPLVVQFASNNHD 83
S+L +R L R + L +TPM+ A F S K R + +S+ S D PLVVQF +N+ +
Sbjct: 40 SELAWRILSRRYGATLAYTPMLHAKLFATSKKYREDNWSSLDGSSVDRPLVVQFCANDPE 99
Query: 84 DFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRILYEL 143
+ A + V C+ VDLN GCPQ A K YG L+ + L+ +L T+ + L ++
Sbjct: 100 YLLAAAKLVEDKCDAVDLNLGCPQGIAKKGHYGSFLMEEW---DLIHNLINTLHKNL-KV 155
Query: 144 PKEWSIRVY 152
P IR++
Sbjct: 156 PVTAKIRIF 164
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 86/350 (24%), Positives = 142/350 (40%)
Query: 204 GHAHEVN-DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSV 262
GH + A A SS++ +GA D + +W+ T P+ + H + V CV ++ D V
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEV 200
Query: 263 VISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITS-----VHSLVKSTKNHLSN 317
+ +GS DNT+ +WD KS +CL +AL+ ITS +H + +K L++
Sbjct: 201 IATGSMDNTIRLWDPKSG-------QCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLAS 253
Query: 318 ----GLLTKLVFAFR-CKY-LNGLLSGVLMSTQHLMVLLDFLGS-TQIGDVTPISIHNSC 370
G + R C+Y ++G + V LL + GS + V I+ C
Sbjct: 254 SSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLL-YSGSHDRTVRVWDINSQGRC 312
Query: 371 FQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV-TDYVGEPIVDACFTRDC- 428
LK + H +H L+ RI +D TG T + + + C
Sbjct: 313 INILK------SHAHWVNHLSLSTDYALRIGAFD-HTGKKPSTPEEAQKKALENYEKICK 365
Query: 429 ------QCILTCSTDECLRLFD--KATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS 480
+ ++T S D + L++ K+T + + GH+ + D + I S
Sbjct: 366 KNGNSEEMMVTASDDYTMFLWNPLKST-KPIARMTGHQKLVNHVAFSPDGR--YIVSASF 422
Query: 481 DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
D I W D IST V +V S R + + +K+W
Sbjct: 423 DNSIKLWDGRDGKFISTFRGHVA-SVYQVAWSSDCRLLVSCSKDTTLKVW 471
Score = 146 (56.5 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 180 LTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
+T D + LWNP ++ + GH VN + D I S + D S+ LW+ G
Sbjct: 375 VTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDG 434
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + +R H + V V ++ D +++S S+D T+ +WDV++R
Sbjct: 435 KFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTR 476
Score = 139 (54.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 33/134 (24%), Positives = 62/134 (46%)
Query: 146 EWSIRVYRPLTVNRELFVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKT 201
++++ ++ PL + + ++G + H F DG Y ++ D IKLW+ + T
Sbjct: 380 DYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFIST 439
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS 261
+ GH V + D + S + D ++ +W+V T + H +V V ++ D
Sbjct: 440 FRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGK 499
Query: 262 VVISGSQDNTVMMW 275
V SG +D V +W
Sbjct: 500 RVCSGGKDKMVRLW 513
Score = 123 (48.4 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 26/99 (26%), Positives = 52/99 (52%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATG 448
I++AS D I+ +D R G ++ + G + ++ DC+ +++CS D L+++D T
Sbjct: 417 IVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTR 476
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
+L + GHK + ++ +D K ++ G D + W
Sbjct: 477 KLSVDLPGHKDEVYTVDWSVDGK--RVCSGGKDKMVRLW 513
Score = 101 (40.6 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 151 VYRPLTVNRELFVLSG----LMHTRF-PVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH 205
V++ V R ++G ++ + F P S +T D ++W+ + T GH
Sbjct: 126 VFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGH 185
Query: 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR-RWREHASKVTCVKFNEDSSV-- 262
+ V + + D IA+G+ D ++ LW+ +GQ + R H+ +T + + V
Sbjct: 186 YNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKP 245
Query: 263 -----VISGSQDNTVMMWDVKSR 280
+ S S+D T+ +WD SR
Sbjct: 246 GSKPRLASSSKDGTIKIWDTVSR 268
Score = 68 (29.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 432 LTCSTDECLRL--FDKATGE---LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG-KIY 485
L+ STD LR+ FD TG+ EE + ++ C + ++ +SD ++
Sbjct: 326 LSLSTDYALRIGAFDH-TGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMF 384
Query: 486 KWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEE 534
W + S++ + G + +VN + P ++I+SA N++KLW +
Sbjct: 385 LWNPLKSTK--PIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRD 433
Score = 43 (20.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 341 MSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDH 389
+S + L LL+ L T D P + SC K+A D + ++ ++D+
Sbjct: 55 ISEKQLEELLNQLNGTS-DDPVPYTF--SCTIQGKKASDPVKTIDITDN 100
>CGD|CAL0004455 [details] [associations]
symbol:orf19.1404 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
CGD:CAL0004455 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AACQ01000101
EMBL:AACQ01000099 eggNOG:COG0042 HOGENOM:HOG000203649 KO:K05542
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 RefSeq:XP_714575.1
RefSeq:XP_714669.1 ProteinModelPortal:Q59YC2 STRING:Q59YC2
GeneID:3643687 GeneID:3643817 KEGG:cal:CaO19.1404
KEGG:cal:CaO19.8982 Uniprot:Q59YC2
Length = 467
Score = 181 (68.8 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 46/131 (35%), Positives = 70/131 (53%)
Query: 27 SKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPE-----DTPLVVQFASNN 81
S+L +R L R + LC+TPM A F K RN+ ++T+ + D PLVVQF +N+
Sbjct: 69 SELAWRILSRRYGAQLCYTPMFHAKLFATQEKYRNSMWTTNLDGNKDLDRPLVVQFCAND 128
Query: 82 HDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRILY 141
D ++A + + C+ +DLN GCPQ A K YG L+ L++ L + + L
Sbjct: 129 PDYLLQAAKLIENECDAIDLNLGCPQGIARKGKYGAFLMDDW---DLVYKLIKNLHDNL- 184
Query: 142 ELPKEWSIRVY 152
+P IR+Y
Sbjct: 185 SIPVTAKIRIY 195
Score = 37 (18.1 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 371 FQALKEARDSITSVH-VSDH--EILTASLD 397
F+ +KE DS+ S H + H ++L A L+
Sbjct: 310 FEIVKENYDSLASRHAMKSHFFKLLHAFLE 339
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 175 (66.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 78/334 (23%), Positives = 137/334 (41%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI--ASGASDKS 229
F D + TC DKK+K+WN L+ Y H+ +VN +S + A+ +SD
Sbjct: 673 FSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCF 732
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP-IQVR 288
+ LW++ + H + V +F+ D ++ S S D T+ +WDVKS + I V+
Sbjct: 733 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVK 792
Query: 289 --CLN-EALKEARDSITSVHS-------LVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSG 338
LN E +E + I S ++ + KN + + + C+ +
Sbjct: 793 QFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLWNMDSCLKVADCRGHLSWVHC 852
Query: 339 VLMSTQHLMVLLDFLGST-QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLD 397
V+ S L T ++ + + NS LK+ D + ++E++ ++D
Sbjct: 853 VMFSPDGSSFLTSSDDQTIRLWETKKVC-KNSAI-VLKQEIDVV----FQENEVMVLAVD 906
Query: 398 CRIRRYDI---RTGNLVTDYVGEPIVDAC-FTRDCQCILTCSTDECLRLFDKATGELLEE 453
I+R + +TG + DY+ E V C + Q I D + + + + +
Sbjct: 907 -NIKRLQLINGKTGQI--DYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQS 963
Query: 454 YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
GHK I+ D K + S D I W
Sbjct: 964 RIGHKKTVRHIQFTDDGKT--LISSSDDSSIQVW 995
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 77/344 (22%), Positives = 152/344 (44%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLW-----NPYRNLLLKTYGGHAHEVND---ATAAC---- 216
H RF D +C +D +KLW N +++ +K + ++ E + C
Sbjct: 756 HCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWS 815
Query: 217 -DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
D ++I A +K + LW + + V R H S V CV F+ D S ++ S D T+ +W
Sbjct: 816 ADGTRIMVAAKNK-IFLWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLW 874
Query: 276 DVKSRSHHPIQVRCLNEA--LKEARDSITSVHS-LVKSTKN----HLSNGLLTKLVFAFR 328
+ K +V C N A LK+ D + + +V + N L NG ++ +
Sbjct: 875 ETK-------KV-CKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQIDYLIE 926
Query: 329 CKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD 388
+ +S +S HL + F G ++ + ++N FQ+ + ++ + +D
Sbjct: 927 AQ-----VSCCCLSP-HLQYIA-FGGEDGAVEILEL-LNNRIFQSRIGHKKTVRHIQFTD 978
Query: 389 H--EILTASLDCRIRRYDIRTGNLV-TDYVGEPIVDACFTRDCQCILTCSTDECLR-LFD 444
++++S D I+ ++ ++ V E + D ++ + +L+ S D ++ ++
Sbjct: 979 DGKTLISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSK-LLSWSFDGTVKKIWS 1037
Query: 445 KATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-W 487
TG + +++ H+ D + C + S D+ F +S K K W
Sbjct: 1038 IITGRIEKDFVCHQ--DTVLSCDI-SPDATKFSSTSADKTAKIW 1078
Score = 132 (51.5 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG +CG DK ++++ L H EV + D IA+ + DK
Sbjct: 628 HACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDK 687
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI--SGSQDNTVMMWDVKSR 280
V +W TG V + EH+ +V C F +S ++ + S D + +WD+ +
Sbjct: 688 KVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQK 741
Score = 100 (40.3 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 386 VSDHEILTASLDCRIRR-YDIRTGNLVTDYV-GEPIVDAC-FTRDCQCILTCSTDECLRL 442
+ + ++L+ S D +++ + I TG + D+V + V +C + D + S D+ ++
Sbjct: 1018 LKNSKLLSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKI 1077
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQI---STL 498
+ L E +GHK + C + S DS + G +G+I W + + + + +
Sbjct: 1078 WSFELLSPLHELRGHKGC---VRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPI 1134
Query: 499 IHSVGKAV----VNSLCSHPTRKHIMSACGNNVKLW 530
+ G A V LC P K ++SA G +K W
Sbjct: 1135 LVEEGAATHGGWVTDLCFSPDSKMLVSA-GGYLKWW 1169
Score = 94 (38.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 27/101 (26%), Positives = 44/101 (43%)
Query: 195 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 254
+NL H V A + D +IAS DK++ +++ TG+ + + H +V C
Sbjct: 612 KNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCC 671
Query: 255 KFNEDSSVVISGSQDNTVMMWD------VKSRSHHPIQVRC 289
F+ D + + S D V +W+ V H QV C
Sbjct: 672 AFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNC 712
Score = 85 (35.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 33/133 (24%), Positives = 59/133 (44%)
Query: 376 EARDSITSVHVSD--HEIL--TASLDCRIRRYDIRTGNLVTDYVGEP-IVDAC-FTRDCQ 429
E + + H ++ H +L TAS DC ++ +D+ G V+ C F+ D +
Sbjct: 705 EHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDK 764
Query: 430 CILTCSTDECLRLFD-KATGE---------LLEEYKGHKSGDFRIECCLDSKDSQIFCGS 479
+ +CS D L+L+D K+ E L + + + ++CC S D +
Sbjct: 765 LLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVA 824
Query: 480 SDGKIYKWQLVDS 492
+ KI+ W + DS
Sbjct: 825 AKNKIFLWNM-DS 836
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 172 (65.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 70/283 (24%), Positives = 127/283 (44%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
+F +GS + G D+ I LWN Y + T GH+ V + D S + S ++DK+
Sbjct: 74 KFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKT 133
Query: 230 VILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR 288
V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++ IQ
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQTF 191
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLL--TKLVFAFRCKYLNGLLSGVLMSTQHL 346
+ + TS + N + L KL + R + + + +G+ +S++
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSV-TGLSLSSEGS 249
Query: 347 MVLLDFLGST-QIGDVTPISIHNSC---FQA-LKEARDSITSVHVSDH--EILTASLDCR 399
+L + + +T ++ DV P + C FQ + ++ S +I S D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 400 IRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECL 440
+ +D + ++ G I + F D IL+ S+D+ L
Sbjct: 310 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 152 (58.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 165 SG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IA 222
SG +M + DGS + +DK + +W+ +K GH VN A Q +
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD++
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK- 227
Query: 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
L ++ DS+T + SL LSN +
Sbjct: 228 -------LTYTMRGHADSVTGL-SLSSEGSYLLSNAM 256
Score = 143 (55.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 165 SGLMHTRFPVDGSYCLTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+ +++ +P L C GSD +KLW+ + ++T+ + ++V T S QI
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII 210
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
SG D + +W++ + R HA VT + + + S ++S + DNTV +WDV+
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 35/143 (24%), Positives = 72/143 (50%)
Query: 145 KEWSIRVYR-PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWN--PY--RNLLL 199
K W +R + T+ ++GL + +GSY L+ D +++W+ P+ + +
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSS---EGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 200 KTYGGHAHEVNDATAAC----DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255
K + G+ H C D S+IA+G++D+ V +W+ T+ + + + HA + V
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 335
Query: 256 FNEDSSVVISGSQDNTVMMWDVK 278
F+ D +++S S D + M +++
Sbjct: 336 FHPDEPIILSASSDKRLYMGEIQ 358
Score = 114 (45.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 535
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 94 (38.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 263 VISGSQDNTVMMWD 276
+ S S D TV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 87 (35.7 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 380 SITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTD 437
++T SD +I++ +D I+ +D+R L G + + + + +L+ + D
Sbjct: 199 AVTFNDTSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 438 ECLRLFDK---ATGE-LLEEYKG--HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
+R++D A E ++ ++G H + C S+I GS+D +Y W
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ L G +N + HP I+SA + +L+ E
Sbjct: 318 RRILYKLPGHAGS--INEVAFHPDEPIILSASSDK-RLYMGE 356
Score = 65 (27.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
P+ H +V C KF+ + S + S D +++W+V
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 96
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 172 (65.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 70/283 (24%), Positives = 127/283 (44%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
+F +GS + G D+ I LWN Y + T GH+ V + D S + S ++DK+
Sbjct: 74 KFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKT 133
Query: 230 VILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR 288
V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++ IQ
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQTF 191
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLL--TKLVFAFRCKYLNGLLSGVLMSTQHL 346
+ + TS + N + L KL + R + + + +G+ +S++
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSV-TGLSLSSEGS 249
Query: 347 MVLLDFLGST-QIGDVTPISIHNSC---FQA-LKEARDSITSVHVSDH--EILTASLDCR 399
+L + + +T ++ DV P + C FQ + ++ S +I S D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 400 IRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECL 440
+ +D + ++ G I + F D IL+ S+D+ L
Sbjct: 310 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 152 (58.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 165 SG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IA 222
SG +M + DGS + +DK + +W+ +K GH VN A Q +
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD++
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK- 227
Query: 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
L ++ DS+T + SL LSN +
Sbjct: 228 -------LTYTMRGHADSVTGL-SLSSEGSYLLSNAM 256
Score = 143 (55.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 165 SGLMHTRFPVDGSYCLTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+ +++ +P L C GSD +KLW+ + ++T+ + ++V T S QI
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII 210
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
SG D + +W++ + R HA VT + + + S ++S + DNTV +WDV+
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 35/143 (24%), Positives = 72/143 (50%)
Query: 145 KEWSIRVYR-PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWN--PY--RNLLL 199
K W +R + T+ ++GL + +GSY L+ D +++W+ P+ + +
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSS---EGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 200 KTYGGHAHEVNDATAAC----DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255
K + G+ H C D S+IA+G++D+ V +W+ T+ + + + HA + V
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 335
Query: 256 FNEDSSVVISGSQDNTVMMWDVK 278
F+ D +++S S D + M +++
Sbjct: 336 FHPDEPIILSASSDKRLYMGEIQ 358
Score = 114 (45.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 535
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 94 (38.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 263 VISGSQDNTVMMWD 276
+ S S D TV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 87 (35.7 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 380 SITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTD 437
++T SD +I++ +D I+ +D+R L G + + + + +L+ + D
Sbjct: 199 AVTFNDTSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 438 ECLRLFDK---ATGE-LLEEYKG--HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
+R++D A E ++ ++G H + C S+I GS+D +Y W
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ L G +N + HP I+SA + +L+ E
Sbjct: 318 RRILYKLPGHAGS--INEVAFHPDEPIILSASSDK-RLYMGE 356
Score = 65 (27.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
P+ H +V C KF+ + S + S D +++W+V
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 96
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 172 (65.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 70/283 (24%), Positives = 127/283 (44%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
+F +GS + G D+ I LWN Y + T GH+ V + D S + S ++DK+
Sbjct: 74 KFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKT 133
Query: 230 VILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR 288
V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++ IQ
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQTF 191
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLL--TKLVFAFRCKYLNGLLSGVLMSTQHL 346
+ + TS + N + L KL + R + + + +G+ +S++
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSV-TGLSLSSEGS 249
Query: 347 MVLLDFLGST-QIGDVTPISIHNSC---FQA-LKEARDSITSVHVSDH--EILTASLDCR 399
+L + + +T ++ DV P + C FQ + ++ S +I S D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 400 IRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECL 440
+ +D + ++ G I + F D IL+ S+D+ L
Sbjct: 310 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 152 (58.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 165 SG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IA 222
SG +M + DGS + +DK + +W+ +K GH VN A Q +
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD++
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK- 227
Query: 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
L ++ DS+T + SL LSN +
Sbjct: 228 -------LTYTMRGHADSVTGL-SLSSEGSYLLSNAM 256
Score = 143 (55.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 165 SGLMHTRFPVDGSYCLTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+ +++ +P L C GSD +KLW+ + ++T+ + ++V T S QI
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII 210
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
SG D + +W++ + R HA VT + + + S ++S + DNTV +WDV+
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 34/143 (23%), Positives = 72/143 (50%)
Query: 145 KEWSIRVYR-PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWN--PY--RNLLL 199
K W +R + T+ ++GL + +GSY L+ D +++W+ P+ + +
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSS---EGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 200 KTYGGHAHEVNDATAAC----DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255
+ + G+ H C D S+IA+G++D+ V +W+ T+ + + + HA + V
Sbjct: 276 RIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 335
Query: 256 FNEDSSVVISGSQDNTVMMWDVK 278
F+ D +++S S D + M +++
Sbjct: 336 FHPDEPIILSASSDKRLYMGEIQ 358
Score = 114 (45.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 535
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 94 (38.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 263 VISGSQDNTVMMWD 276
+ S S D TV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 86 (35.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 36/162 (22%), Positives = 69/162 (42%)
Query: 380 SITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTD 437
++T SD +I++ +D I+ +D+R L G + + + + +L+ + D
Sbjct: 199 AVTFNDTSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 438 ECLRLFDK---ATGE-LLEEYKG--HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
+R++D A E + ++G H + C S+I GS+D +Y W
Sbjct: 258 NTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ L G +N + HP I+SA + +L+ E
Sbjct: 318 RRILYKLPGHAGS--INEVAFHPDEPIILSASSDK-RLYMGE 356
Score = 65 (27.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
P+ H +V C KF+ + S + S D +++W+V
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 96
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 171 (65.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 33/115 (28%), Positives = 64/115 (55%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + L+ D ++LW+ + + + + GH +V + D+ QI SG+ D ++ +W
Sbjct: 81 DGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWN 140
Query: 235 VTTGQ---PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPI 285
T G+ + H V+C++F+ ++ ++SGS DN V +WD+KS + +H +
Sbjct: 141 -TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTL 194
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GH+H V D + D SG+ D ++ LW++T G R ++ H V V F+ D+ +
Sbjct: 68 GHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQI 127
Query: 264 ISGSQDNTVMMWD 276
ISGS+D T+ +W+
Sbjct: 128 ISGSRDATIKVWN 140
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 32/122 (26%), Positives = 61/122 (50%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
+ GS D K+K+W+ T H VN T + D S ASG D LWE+++G
Sbjct: 171 IVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSG 230
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEAR 298
+P+ + E + + + F+ + +S + D+ +++WD+ ++ + + E ++A
Sbjct: 231 KPLYKL-EARNTINALAFSPNK-YWLSAATDDKIIIWDLLTKQ---VLAEIVPEVKEQAF 285
Query: 299 DS 300
DS
Sbjct: 286 DS 287
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D +T D IK+++ L T GH V + D + S +SDKS+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIK 257
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
+W+ ++ V + +H +V VK+N S ++S D + ++D
Sbjct: 258 VWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
++ + DG Y + D I +++ LL T GHA + T + DS + + +
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
D + +++V H S V V F+ D + +S S D ++ +WD SRS
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRS 265
Score = 113 (44.8 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 36/134 (26%), Positives = 58/134 (43%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATG 448
+ + ++D I +DI TG L+ G PI F+ D Q ++T S D ++++D
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 222
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVN 508
L GH G + + D+ SSD I W S ++T + V
Sbjct: 223 NLAGTLSGH--GSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQ--VW 278
Query: 509 SLCSHPTRKHIMSA 522
S+ +PT I+SA
Sbjct: 279 SVKYNPTGSKIVSA 292
Score = 103 (41.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 175 DGSYCLTCGS-DKKIKLWN-PYRNLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVI 231
DGS + GS D +K+W L L+ T GH V + + + AS + D +
Sbjct: 30 DGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIR 89
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPIQVR 288
LW++ TG+ ++ V F+ DS + +GS V ++ V+S + H + R
Sbjct: 90 LWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTR 147
Score = 98 (39.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 413 DYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKD 472
D G+ I+ ++ D + + + + D + +FD ATG+LL +GH I S D
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA---MPIRSLTFSPD 201
Query: 473 SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGN-NVKLW 530
SQ+ +SD K V + ++ + G V+ S+ P H +S+ + ++K+W
Sbjct: 202 SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL-SVAFSPDDTHFVSSSSDKSIKVW 259
Score = 72 (30.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 20/112 (17%), Positives = 47/112 (41%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
G++ +G+ + D I+LW+ +K+ + + DS IA+G+
Sbjct: 66 GVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGS 125
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V ++ V +G+ + + ++ D + SG+ D + ++D+
Sbjct: 126 HLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Score = 68 (29.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 22/101 (21%), Positives = 49/101 (48%)
Query: 388 DHEIL-TASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFD 444
D ++L TAS D I+ YD++ NL G ++ F+ D ++ S+D+ ++++D
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWD 260
Query: 445 KATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 485
++ + + H+ + ++ + S+I D I+
Sbjct: 261 TSSRSCVNTFFDHQDQVWSVK--YNPTGSKIVSAGDDRAIH 299
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 166 (63.5 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 29/82 (35%), Positives = 52/82 (63%)
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
++++ GH+H V D T D + S + DK++ LW+V TG+ +R+ H S V V ++
Sbjct: 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 259 DSSVVISGSQDNTVMMWDVKSR 280
+S++ISGS+D T+ +W +K +
Sbjct: 118 KASMIISGSRDKTIKVWTIKGQ 139
Score = 125 (49.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 46/138 (33%), Positives = 65/138 (47%)
Query: 404 DIRTGNLVTDYVGEP-IVDAC-FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
D + G V + G IV C T D L+ S D+ LRL+D ATGE + + GHKS
Sbjct: 51 DQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV 110
Query: 462 FRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS--VGKA-VVNSLCSHPTRKH 518
++ +D K S I GS D I W + + L H+ V + VV + +
Sbjct: 111 MSVD--IDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168
Query: 519 IMSACGNN--VKLWTAEE 534
I+SA GN+ VK W +
Sbjct: 169 IISA-GNDKMVKAWNLNQ 185
Score = 123 (48.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG+Y L+ DK ++LW+ + + GH +V +S I SG+ DK++ +W
Sbjct: 76 DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135
Query: 235 VTTGQPVRRWREH---ASKVTCV---KFNEDSSVVISGSQDNTVMMWDV 277
+ GQ + H S+V V K ++DS +IS D V W++
Sbjct: 136 IK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNL 183
Score = 104 (41.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 197 LLLK-TYGGHAHEVND-ATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHAS 249
L+L+ T GH V AT+A + + S + DK++I W++T G PVR ++ H+
Sbjct: 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH 66
Query: 250 KVTCVKFNEDSSVVISGSQDNTVMMWDV 277
V D + +S S D T+ +WDV
Sbjct: 67 IVQDCTLTADGAYALSASWDKTLRLWDV 94
Score = 81 (33.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 34/147 (23%), Positives = 64/147 (43%)
Query: 392 LTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDKATGE 449
L+AS D +R +D+ TG +VG ++ + I++ S D+ ++++ G+
Sbjct: 81 LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT-IKGQ 139
Query: 450 LLEEYKGHKSGDFRIECCLDSK---DSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVG-K 504
L GH ++ + K DS + + K+ K W L +Q +G
Sbjct: 140 CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNL---NQFQIEADFIGHN 196
Query: 505 AVVNSLCSHPTRKHIMSACGNN-VKLW 530
+ +N+L + P I SA + + LW
Sbjct: 197 SNINTLTASPDGTLIASAGKDGEIMLW 223
Score = 73 (30.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 37/176 (21%), Positives = 72/176 (40%)
Query: 371 FQALKEARDSITSVHVSDHE--ILTASLDCRIRRYDIRTGNLVT-----DYVGEPIV--D 421
+Q + + SV + I++ S D I+ + I+ L T D+V + V +
Sbjct: 100 YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN 159
Query: 422 ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS- 480
D I++ D+ ++ ++ ++ ++ GH S I S D + +
Sbjct: 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN---INTLTASPDGTLIASAGK 216
Query: 481 DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 536
DG+I W L + TL + V SL P R + +A +K+++ + Y
Sbjct: 217 DGEIMLWNLAAKKAMYTLS---AQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQY 269
Score = 44 (20.5 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 449 ELLEEYKGH-KSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSS 493
+L E+ G+ K+ + S D Q +F G +D I WQ++ ++
Sbjct: 273 DLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTAN 319
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 171 (65.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 54/205 (26%), Positives = 98/205 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
+F +GS + G D+ I LWN Y + T GH+ V + D S + S ++DK+
Sbjct: 73 KFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKT 132
Query: 230 VILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR 288
V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++ IQ
Sbjct: 133 VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQTF 190
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLL--TKLVFAFRCKYLNGLLSGVLMSTQHL 346
+ + TS + N + L KL + R + + + +G+ +S++
Sbjct: 191 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSV-TGLSLSSEGS 248
Query: 347 MVLLDFLGST-QIGDVTPISIHNSC 370
+L + + +T ++ DV P + C
Sbjct: 249 YLLSNAMDNTVRVWDVRPFAPKERC 273
Score = 152 (58.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 165 SG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IA 222
SG +M + DGS + +DK + +W+ +K GH VN A Q +
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 168
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD++
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK- 226
Query: 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
L ++ DS+T + SL LSN +
Sbjct: 227 -------LTYTMRGHADSVTGL-SLSSEGSYLLSNAM 255
Score = 143 (55.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 165 SGLMHTRFPVDGSYCLTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+ +++ +P L C GSD +KLW+ + ++T+ + ++V T S QI
Sbjct: 151 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII 209
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
SG D + +W++ + R HA VT + + + S ++S + DNTV +WDV+
Sbjct: 210 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Score = 143 (55.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 36/143 (25%), Positives = 72/143 (50%)
Query: 145 KEWSIRVYR-PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWN--PY--RNLLL 199
K W +R + T+ ++GL + +GSY L+ D +++W+ P+ + +
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSS---EGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 200 KTYGGHAHEVNDATAAC----DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255
K + G+ H C D S+IA+G++D+ V +W+ T+ + + + HA + V
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 334
Query: 256 FNEDSSVVISGSQDNTVMMWDVK 278
F+ D ++IS S D + M +++
Sbjct: 335 FHPDEPIIISASSDKRLYMGEIQ 357
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 32/106 (30%), Positives = 51/106 (48%)
Query: 183 GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR 242
G D IK+W+ +N L T GHA V + + + S + S A D +V +W+V P
Sbjct: 212 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 271
Query: 243 RWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVKSR 280
R + H + ++ ++ D S + +GS D V +WD SR
Sbjct: 272 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 317
Score = 114 (45.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 169
Query: 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 535
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 170 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Score = 94 (38.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 263 VISGSQDNTVMMWD 276
+ S S D TV +WD
Sbjct: 124 LFSASTDKTVAVWD 137
Score = 86 (35.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 380 SITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTD 437
++T SD +I++ +D I+ +D+R L G + + + + +L+ + D
Sbjct: 198 AVTFNDTSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 256
Query: 438 ECLRLFDK---ATGE-LLEEYKG--HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
+R++D A E ++ ++G H + C S+I GS+D +Y W
Sbjct: 257 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 316
Query: 492 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
+ L G +N + HP I+SA + +L+ E
Sbjct: 317 RRILYKLPGHAGS--INEVAFHPDEPIIISASSDK-RLYMGE 355
Score = 65 (27.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
P+ H +V C KF+ + S + S D +++W+V
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 95
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 175 (66.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 72/273 (26%), Positives = 124/273 (45%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G Y ++ +D+ +K+W+ LL T GH V A S + +G+ D ++ +W+V
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDV 365
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALK 295
+G+ + H + V CV+F D + V+SG D TV +W+ + RC+ L
Sbjct: 366 ESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTG-------RCIR-TLT 415
Query: 296 EARDSITSVHSLVKSTKNHLSNGLL-TKL-VFAF---RCKYLNGLLSGVLMSTQHLMVLL 350
+ + S+ L +S ++ + +G L T + V+ F + LL G T + +
Sbjct: 416 GHNNRVYSL--LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG 473
Query: 351 DFLGSTQIGDVTPI-SIHN-SCFQALKEARDSITSVH-VSDHEILTASLDCRIRRYDIRT 407
+ L S + IH +C L R +ITS+ + + T+S D ++ +DI
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIER 533
Query: 408 GNLVTDYVGEPIVDACFTRDCQCILTCSTDECL 440
G L+ D V +D+ C L CST L
Sbjct: 534 GALIRDLV---TLDSGGNGGCIWRL-CSTSTML 562
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 68/292 (23%), Positives = 123/292 (42%)
Query: 180 LTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GSD +K+W + ++ T GH V + + I SG++D++V +W G
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDG 328
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH------HPIQVRCLNE 292
+ + H S V C+ S++++GS+D T+ +WDV+S H H VRC+
Sbjct: 329 SLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Query: 293 ALKEARDSITSVHSL-VKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD 351
+ ++ + VK H + T N + +L ++ +V
Sbjct: 387 ---DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGH-------NNRVYSLLFESERSIVCSG 436
Query: 352 FLG-STQIGDVTPISIHNSCFQALKEARDSITS-VHVSDHEILTASLDCRIRRYDIRTGN 409
L S ++ D T C AL + S+TS + + + +++ + D +R +DI G
Sbjct: 437 SLDTSIRVWDFTRPE-GQECV-ALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGT 494
Query: 410 LVTDYVGE-PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG 460
V G + + + T S D ++L+D G L+ + SG
Sbjct: 495 CVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSG 546
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 42/175 (24%), Positives = 79/175 (45%)
Query: 109 WAIKEGYGCALLSKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLM 168
W+ +G +LL + H IL ++ ++RV+ + R L L G
Sbjct: 323 WSTVDG---SLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVW-DVESGRHLATLHG-H 377
Query: 169 HTRF---PVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
H DG+ ++ G D +K+WN + ++T GH + V + S + SG+
Sbjct: 378 HAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGS 437
Query: 226 SDKSVILWEVTT--GQP-VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
D S+ +W+ T GQ V + H S + ++ ++++S + D+ V +WD+
Sbjct: 438 LDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDI 490
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 175 (66.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 72/273 (26%), Positives = 124/273 (45%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G Y ++ +D+ +K+W+ LL T GH V A S + +G+ D ++ +W+V
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDV 365
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALK 295
+G+ + H + V CV+F D + V+SG D TV +W+ + RC+ L
Sbjct: 366 ESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTG-------RCIR-TLT 415
Query: 296 EARDSITSVHSLVKSTKNHLSNGLL-TKL-VFAF---RCKYLNGLLSGVLMSTQHLMVLL 350
+ + S+ L +S ++ + +G L T + V+ F + LL G T + +
Sbjct: 416 GHNNRVYSL--LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG 473
Query: 351 DFLGSTQIGDVTPI-SIHN-SCFQALKEARDSITSVH-VSDHEILTASLDCRIRRYDIRT 407
+ L S + IH +C L R +ITS+ + + T+S D ++ +DI
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIER 533
Query: 408 GNLVTDYVGEPIVDACFTRDCQCILTCSTDECL 440
G L+ D V +D+ C L CST L
Sbjct: 534 GALIRDLV---TLDSGGNGGCIWRL-CSTSTML 562
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 68/292 (23%), Positives = 123/292 (42%)
Query: 180 LTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GSD +K+W + ++ T GH V + + I SG++D++V +W G
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDG 328
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH------HPIQVRCLNE 292
+ + H S V C+ S++++GS+D T+ +WDV+S H H VRC+
Sbjct: 329 SLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Query: 293 ALKEARDSITSVHSL-VKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD 351
+ ++ + VK H + T N + +L ++ +V
Sbjct: 387 ---DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGH-------NNRVYSLLFESERSIVCSG 436
Query: 352 FLG-STQIGDVTPISIHNSCFQALKEARDSITS-VHVSDHEILTASLDCRIRRYDIRTGN 409
L S ++ D T C AL + S+TS + + + +++ + D +R +DI G
Sbjct: 437 SLDTSIRVWDFTRPE-GQECV-ALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGT 494
Query: 410 LVTDYVGE-PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG 460
V G + + + T S D ++L+D G L+ + SG
Sbjct: 495 CVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSG 546
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 42/175 (24%), Positives = 79/175 (45%)
Query: 109 WAIKEGYGCALLSKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLM 168
W+ +G +LL + H IL ++ ++RV+ + R L L G
Sbjct: 323 WSTVDG---SLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVW-DVESGRHLATLHG-H 377
Query: 169 HTRF---PVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
H DG+ ++ G D +K+WN + ++T GH + V + S + SG+
Sbjct: 378 HAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGS 437
Query: 226 SDKSVILWEVTT--GQP-VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
D S+ +W+ T GQ V + H S + ++ ++++S + D+ V +WD+
Sbjct: 438 LDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDI 490
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 139 (54.0 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 49/174 (28%), Positives = 80/174 (45%)
Query: 109 WAIKEGYGCALLSKQ--RTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSG 166
W+I EG LS + + + F R T L + S+R++ P T +L G
Sbjct: 398 WSISEGRFLRALSGHFSQIYAIAFDGRRIATGSL-----DTSVRIWDPNTGQCHA-ILQG 451
Query: 167 LMHT----RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
HT + + G +T GSD +++W+ R + H + V + D+++I
Sbjct: 452 --HTSLVGQLQMSGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVT--SLQFDNNRIV 507
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM-MW 275
SG SD V +W + TGQ +R + V V F E+ +V++S TVM +W
Sbjct: 508 SGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVW 561
Score = 138 (53.6 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 36/97 (37%), Positives = 52/97 (53%)
Query: 200 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 259
KT GH V A D+ + SG D+ V +W + TG+ + R H S V C+K + D
Sbjct: 286 KTLEGHVMGVW-AMVPWDNI-LVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMS-D 342
Query: 260 SSVVISGSQDNTVMMWDVKS---RS---HHPIQVRCL 290
+ ISGS+D T+ +WD+++ RS H VRCL
Sbjct: 343 KNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCL 379
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 49/239 (20%), Positives = 101/239 (42%)
Query: 183 GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR 242
G D+++++WN + GH V D + SG+ D ++ +W++ TG
Sbjct: 309 GCDREVRVWNMATGESIYLLRGHTSTVR-CLKMSDKNTAISGSRDTTLRIWDLRTGTCRS 367
Query: 243 RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSIT 302
H + V C+ + D +V+SGS D T +W + L+ +
Sbjct: 368 VLVGHQASVRCLAVHGD--IVVSGSYDTTARVWSISE-----------GRFLRALSGHFS 414
Query: 303 SVHSLVKSTKNHLSNGLLTKL-VFAFRCKYLNGLLSGVLMSTQHLMVLLDFL------GS 355
++++ + + L T + ++ + +L G L + D L GS
Sbjct: 415 QIYAIAFDGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSGDTLVTGGSDGS 474
Query: 356 TQIGDVTPIS-IHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTD 413
++ +T ++ IH L +S+TS+ ++ I++ D R++ + +RTG L+ +
Sbjct: 475 VRVWSLTRMAPIHR-----LAAHDNSVTSLQFDNNRIVSGGSDGRVKVWCLRTGQLLRE 528
Score = 85 (35.0 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 37/162 (22%), Positives = 63/162 (38%)
Query: 369 SCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDC 428
+C L + S+ + V +++ S D R + I G + G D
Sbjct: 364 TCRSVLVGHQASVRCLAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDG 423
Query: 429 QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
+ I T S D +R++D TG+ +GH S +++ D+ + G SDG + W
Sbjct: 424 RRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSGDT----LVTGGSDGSVRVWS 479
Query: 489 LVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
L + I L + V SL + + VK+W
Sbjct: 480 LTRMAPIHRL--AAHDNSVTSL-QFDNNRIVSGGSDGRVKVW 518
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 171 (65.3 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 40/122 (32%), Positives = 62/122 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG +T DK +K+W +R L + H + V A + D I S + DK+V
Sbjct: 73 FCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 132
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291
LW+ ++ + V + EH VT V F+ + + + DNTV +WDV R+H +Q L+
Sbjct: 133 LWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV--RTHRLLQHYQLH 190
Query: 292 EA 293
A
Sbjct: 191 SA 192
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 68/287 (23%), Positives = 122/287 (42%)
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW--DVKSRSH-- 282
D +++W + R+ H VTCV F+ ++ SGS+D TV +W +VK S
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 283 --HPIQVRCLNEALKEARDSIT-SVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGV 339
H VR ++ + + +T S VK H K +F+ +++N +
Sbjct: 62 RAHTATVRSVHFC-SDGQSFVTASDDKTVKVWATHRQ-----KFLFSLS-QHINWVRCAK 114
Query: 340 LMSTQHLMVLLDFLGSTQIGDVTPIS-IHNSCFQALKEARDSITSV--HVSDHEILTASL 396
L+V + ++ D + +H+ C E +T V H S I A +
Sbjct: 115 FSPDGRLIVSASDDKTVKLWDKSSRECVHSYC-----EHGGFVTYVDFHPSGTCIAAAGM 169
Query: 397 DCRIRRYDIRTGNLVTDY-VGEPIVDAC-FTRDCQCILTCSTDECLRLFDKATGELLEEY 454
D ++ +D+RT L+ Y + V+ F ++T S+D L++ D G LL
Sbjct: 170 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 229
Query: 455 KGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ----LVDSSQIS 496
GH+ + S+ + F G SD ++ W+ +VD +++
Sbjct: 230 HGHQGPATTVAF---SRTGEYFASGGSDEQVMVWKSNFDIVDHGEVT 273
Score = 135 (52.6 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 29/104 (27%), Positives = 47/104 (45%)
Query: 178 YCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT 236
+ L GS DK +++W P + H V D + + DK+V +W
Sbjct: 36 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 95
Query: 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + +H + V C KF+ D +++S S D TV +WD SR
Sbjct: 96 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSR 139
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F DG ++ DK +KLW+ + +Y H V + IA+ D +V
Sbjct: 114 KFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 173
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+W+V T + ++ ++ H++ V + F+ + +I+ S D+T+ + D+
Sbjct: 174 KVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 220
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 127 (49.8 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV-TTG 238
++ G D I+ W + +T +VN D +A+ A ++V L+++ TT
Sbjct: 6 VSAGYDHTIRFWEALTGVCSRTIQHSDSQVNRLEITNDKKLLAT-AGHQNVRLYDIRTTN 64
Query: 239 -QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
PV + H VT V F +D+ +++ S+D T+ +WDV+S S
Sbjct: 65 PNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSPS 108
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 31/122 (25%), Positives = 59/122 (48%)
Query: 140 LYELPKEWSIRVYRPLTVNR--ELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL 197
++E+P +P+T R ++ L+ + D + TC +D ++W+ +
Sbjct: 185 VWEMPNHTDASHLKPVTKFRAHSTYITRILLSS----DVKHLATCSADHTARVWSIDDDF 240
Query: 198 LLKT-YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF 256
L+T GH V D + DS+ + + +SD V LW+++T + VR++ H CV
Sbjct: 241 KLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQYGGHHKGAVCVAL 300
Query: 257 NE 258
N+
Sbjct: 301 ND 302
Score = 91 (37.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 31/168 (18%), Positives = 76/168 (45%)
Query: 378 RDSITSVHVS-DHE-ILTASLDCRIRRYDIRTGNLVTDYV-GEPIVDACFTRDCQCILTC 434
R ++TSV D+ ++T+S D I+ +D+R+ ++ +Y P+ + + +++C
Sbjct: 75 RGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYKHNAPVNEVVIHPNQGELISC 134
Query: 435 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL---VD 491
D +R++D + + + + S S + ++ G Y W++ D
Sbjct: 135 DRDGNIRIWDLGENQCTHQLTPEDDTSLQ-SLSMASDGSMLAAANTKGNCYVWEMPNHTD 193
Query: 492 SSQIS--TLIHSVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAEEDY 536
+S + T + + L S KH+ + ++ ++W+ ++D+
Sbjct: 194 ASHLKPVTKFRAHSTYITRILLSSDV-KHLATCSADHTARVWSIDDDF 240
Score = 86 (35.3 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 381 ITSVHVSDH--EILTASLDCRIRRYDIRTG-NLVTDYVGEP--IVDACFTRDCQCILTCS 435
IT + +S + T S D R + I L T G + D F+ D ++T S
Sbjct: 210 ITRILLSSDVKHLATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTAS 269
Query: 436 TDECLRLFDKATGELLEEYKGHKSG 460
+D +RL+D +T E++ +Y GH G
Sbjct: 270 SDHYVRLWDLSTREIVRQYGGHHKG 294
Score = 76 (31.8 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 16/77 (20%), Positives = 38/77 (49%)
Query: 201 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS 260
++ GH V + D+ + + + D ++ +W+V + R ++ H + V V + +
Sbjct: 70 SFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYK-HNAPVNEVVIHPNQ 128
Query: 261 SVVISGSQDNTVMMWDV 277
+IS +D + +WD+
Sbjct: 129 GELISCDRDGNIRIWDL 145
Score = 73 (30.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 19/111 (17%), Positives = 47/111 (42%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D + +T D IK+W+ + + Y H VN+ + ++ S D ++
Sbjct: 83 FQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYK-HNAPVNEVVIHPNQGELISCDRDGNIR 141
Query: 232 LWEVTTGQPVRRWR-EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
+W++ Q + E + + + D S++ + + +W++ + +
Sbjct: 142 IWDLGENQCTHQLTPEDDTSLQSLSMASDGSMLAAANTKGNCYVWEMPNHT 192
Score = 69 (29.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 221 IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ S D ++ WE TG R + S+V ++ D ++ + N V ++D+++
Sbjct: 5 LVSAGYDHTIRFWEALTGVCSRTIQHSDSQVNRLEITNDKKLLATAGHQN-VRLYDIRTT 63
Query: 281 SHHPI 285
+ +P+
Sbjct: 64 NPNPV 68
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 177 (67.4 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 164 LSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 223
LS RF + +Y T +DK +LW ++ + GH + + D +A+
Sbjct: 763 LSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLAT 822
Query: 224 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
D SVILW+++TG+ V++ H V + F+ D S++ SGS D TV +WDVK
Sbjct: 823 AGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVK 877
Score = 159 (61.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 30/104 (28%), Positives = 56/104 (53%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G Y T D+ +LW L+ + GH + N + + +A+G++DKS LWE+
Sbjct: 733 GFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEI 792
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
TG+ VR + H + + V F+ D ++ + +D +V++WD+ +
Sbjct: 793 QTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLST 836
Score = 134 (52.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 28/108 (25%), Positives = 51/108 (47%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D Y L+C D +LW+ L Y GH V D + + A+ + D++
Sbjct: 687 FSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTAR 746
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
LW P+R + H S V+F+ + + + +GS D + +W++++
Sbjct: 747 LWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQT 794
Score = 110 (43.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRL 442
H + + + T S D R ++I+TG V ++G PI F+ D + + T D + L
Sbjct: 772 HPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVIL 831
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS--SQIST 497
+D +TG+ +++ GH + ++ D S + GSSD + W + + S +ST
Sbjct: 832 WDLSTGKKVKKMDGHTKCVYSLDFSCDG--SILASGSSDCTVRLWDVKKAFNSSLST 886
Score = 83 (34.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 27/109 (24%), Positives = 45/109 (41%)
Query: 180 LTCGSDKKI-KLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS KL + KT+ GH+ V + + DS + S + D + LW + T
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETM 711
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQV 287
+ ++ H V V F+ + S D T +W S P+++
Sbjct: 712 SNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHIS--PLRI 758
Score = 81 (33.6 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
G+ +E N +T A ++ + SG+S S L + + + H+ V F+ DS +
Sbjct: 637 GNNNENNKSTTA--NNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYL 694
Query: 264 ISGSQDNTVMMWDVKSRSH 282
+S S+D T +W +++ S+
Sbjct: 695 LSCSEDTTARLWSMETMSN 713
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWN 192
GL T D SD +K+WN
Sbjct: 560 GLNTTDISKDAQLVAGGFSDSSVKIWN 586
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 156 (60.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 35/107 (32%), Positives = 61/107 (57%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNL--LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILW 233
G ++ D ++ LW+P ++ + K +G H VN A+ + D IA+ + D SV LW
Sbjct: 358 GERLVSASDDLQLILWDPQKSTKPITKMHG-HQKVVNHASFSPDGRCIATASFDSSVRLW 416
Query: 234 EVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ TG+ + R H + V ++ DS +++S SQD T+ +WDV+S+
Sbjct: 417 DGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 77/343 (22%), Positives = 140/343 (40%)
Query: 204 GHAHEVNDAT-AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSV 262
GH + A + SS++ +G+ D + LW+ T P+ + H + V+CV + D+S+
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASI 191
Query: 263 VISGSQDNTVMMWDVKS--------RSH-HPIQVRCLNEALKEARDSITSVHSLVKSTKN 313
+ +GS DNT+ WD K R H PI C + L A DS + L +K+
Sbjct: 192 IATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCW-QPLHLAPDS--GPYLLASGSKD 248
Query: 314 HLSNGLLTKL-VFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQ 372
+ KL F ++ V Q+ + + + +I D C
Sbjct: 249 NTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKD----GKCLH 304
Query: 373 ALKEARDSITSVHVS-DHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDACFTRDCQC 430
LK + + +S +H + + + D D + + + + +AC + +
Sbjct: 305 ILKGHAARVNHLSLSTEHVLRSGAYD----HTDFKPKSFSDERRKAKERYEACLKQSGER 360
Query: 431 ILTCSTDECLRLFD--KATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKW 487
+++ S D L L+D K+T + + + GH+ + S D + I S D + W
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKMH-GHQKV---VNHASFSPDGRCIATASFDSSVRLW 416
Query: 488 QLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
++TL V AV S +R + S+ +K+W
Sbjct: 417 DGKTGKFLATLRGHVA-AVYQCAWSTDSRLLVSSSQDTTLKVW 458
Score = 131 (51.2 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 42/144 (29%), Positives = 69/144 (47%)
Query: 151 VYRPLTVNRELFVLSG----LMHTRF-PVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH 205
V+R V R ++G ++ +F P S +T D +LW+ + T GH
Sbjct: 117 VFRVRAVTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGH 176
Query: 206 AHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR-RWREHASKVT--C---VKFNED 259
+ V+ A D+S IA+G+ D ++ W+ G P+ R H + C + D
Sbjct: 177 TNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPD 236
Query: 260 SS--VVISGSQDNTVMMWDVKSRS 281
S ++ SGS+DNTV +W+VK R+
Sbjct: 237 SGPYLLASGSKDNTVRIWNVKLRT 260
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG T D ++LW+ L T GH V + DS + S + D
Sbjct: 394 HASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDT 453
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
++ +W+V + + H +V V ++ D V SG D V +W
Sbjct: 454 TLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 89 (36.4 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATG 448
I TAS D +R +D +TG + G + ++ D + +++ S D L+++D +
Sbjct: 404 IATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
++ + GH+ F ++ D + ++ G +D + W
Sbjct: 464 KMKFDLPGHEDQVFAVDWSPDGQ--RVASGGADKAVRIW 500
Score = 82 (33.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 37/147 (25%), Positives = 70/147 (47%)
Query: 145 KEWSIRVYRPLTVNRELFVLSGLMHTRFPVD----G--SYCLTCGSDKKIKLWNPYRNLL 198
K+ ++R++ + + LF LSG HT P+ G ++ + DK I++W+
Sbjct: 247 KDNTVRIWN-VKLRTLLFTLSG--HTA-PITCVRWGGQNWIYSSSYDKTIRIWDAKDGKC 302
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
L GHA VN + + + + SGA D + + + + R+ +E C+K +
Sbjct: 303 LHILKGHAARVNHLSLSTEHV-LRSGAYDHTDFKPKSFSDER-RKAKERYE--ACLK--Q 356
Query: 259 DSSVVISGSQDNTVMMWDVKSRSHHPI 285
++S S D +++WD + +S PI
Sbjct: 357 SGERLVSASDDLQLILWDPQ-KSTKPI 382
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 178 (67.7 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 83/345 (24%), Positives = 146/345 (42%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ--IASGASDKS 229
F D Y TC +DKK+K+WN L Y H +VN Q +A+ + D
Sbjct: 664 FSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTY 723
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-HPIQVR 288
+ LW++ H + V+ +F+ + + S S D TV +W+V S + I+++
Sbjct: 724 IKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIK 783
Query: 289 CLNEALKEARDSITSVHSLVKSTK-NHLSNGLLT----KLVFAFRCKYLNGLLSGVLMST 343
+ + A + V LVK + S+ +L KL+ F N LL+ V++S
Sbjct: 784 ---DFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLL-FDVTTSN-LLTQVIISH 838
Query: 344 QHLMVLLDFLGSTQIGDVT----PISIHN-SCFQALKEARDSITSVHV----SDHEI-LT 393
+ DF ++ V I + N + + R + VH SD + LT
Sbjct: 839 HSTIQYCDFCAGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLT 898
Query: 394 ASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEE 453
+S D IR ++ +D V + +D F IL + ++L + T ++ +
Sbjct: 899 SSEDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQ 958
Query: 454 YKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQIST 497
+ +S I CC S+D + G +G I +L+D +++
Sbjct: 959 TEPQES---LICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTS 1000
Score = 143 (55.4 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F D +CG+DK ++++ L H E+ T + D +A+ ++DK
Sbjct: 619 HACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADK 678
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSR 280
V +W TG+ + + EH +V C +FN ++ + S D + +WD+K +
Sbjct: 679 KVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDK 732
Score = 135 (52.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 45/145 (31%), Positives = 68/145 (46%)
Query: 153 RPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRN--LLLKTYGGHAHEVN 210
R LT +RE + S + H RF D ++ D I++WN N + LK GH +
Sbjct: 996 RVLT-SREAYRTS-VQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVFLK---GHKEAIK 1050
Query: 211 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 270
D A ++S++ S + D +V +W +TTG+ + + H V + D S S S D
Sbjct: 1051 DF-AFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADK 1109
Query: 271 TVMMWDVKSRS--H----HPIQVRC 289
T +W +S S H H VRC
Sbjct: 1110 TAKIWSFESSSVLHELKGHEACVRC 1134
Score = 76 (31.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 26/115 (22%), Positives = 50/115 (43%)
Query: 420 VDAC-FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCG 478
V C FT DCQ +++ + D +++++ E + KGHK I+ ++S++
Sbjct: 1008 VQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEA---IKDFAFLENSKLLSW 1063
Query: 479 SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
S DG + W + G AV++ S + ++ K+W+ E
Sbjct: 1064 SFDGTVKVWNITTGKTEKDFACHRG-AVLSCAVSPDGSRFSSTSADKTAKIWSFE 1117
Score = 52 (23.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 33/154 (21%), Positives = 67/154 (43%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGEP-IVDAC-FTRDCQCILTCSTDECLRLFD-KAT 447
+ T S D I+ +D++ G V C F+ + I +CSTD ++L++ +
Sbjct: 715 LATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSA 774
Query: 448 GELLE-EYKGH-KSGDFR-------IECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 498
EL E K ++ D + ++CC S+ S + K+ + + S+ ++ +
Sbjct: 775 NELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQV 834
Query: 499 IHSVGKAVVN-SLCSHPTRKHI-MSACGNNVKLW 530
I S + C+ + +S C +++LW
Sbjct: 835 IISHHSTIQYCDFCAGDELVAVALSHC--SIELW 866
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 171 (65.3 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 54/205 (26%), Positives = 98/205 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
+F +GS + G D+ I LWN Y + T GH+ V + D S + S ++DK+
Sbjct: 73 KFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKT 132
Query: 230 VILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR 288
V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++ IQ
Sbjct: 133 VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQTF 190
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLL--TKLVFAFRCKYLNGLLSGVLMSTQHL 346
+ + TS + N + L KL + R + + + +G+ +S++
Sbjct: 191 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSV-TGLSLSSEGS 248
Query: 347 MVLLDFLGST-QIGDVTPISIHNSC 370
+L + + +T ++ DV P + C
Sbjct: 249 YLLSNAMDNTVRVWDVRPFAPKERC 273
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 165 SG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IA 222
SG +M + DGS + +DK + +W+ +K GH VN A Q +
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 168
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD++
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK- 226
Query: 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
L ++ DS+T + SL LSN +
Sbjct: 227 -------LTYTMRGHADSVTGL-SLSSEGSYLLSNAM 255
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 165 SGLMHTRFPVDGSYCLTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+ +++ +P L C GSD +KLW+ + ++T+ + ++V T S QI
Sbjct: 151 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII 209
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
SG D + +W++ + R HA VT + + + S ++S + DNTV +WDV+
Sbjct: 210 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 32/106 (30%), Positives = 51/106 (48%)
Query: 183 GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR 242
G D IK+W+ +N L T GHA V + + + S + S A D +V +W+V P
Sbjct: 212 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 271
Query: 243 RWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVKSR 280
R + H + ++ ++ D S + +GS D V +WD SR
Sbjct: 272 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 317
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 32/131 (24%), Positives = 65/131 (49%)
Query: 145 KEWSIRVYR-PLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWN--PY--RNLLL 199
K W +R + T+ ++GL + +GSY L+ D +++W+ P+ + +
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSS---EGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 200 KTYGGHAHEVNDATAAC----DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255
K + G+ H C D S+IA+G++D+ V +W+ T+ + + + HA + V
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 334
Query: 256 FNEDSSVVISG 266
F+ D ++ +G
Sbjct: 335 FHPDEPIIETG 345
Score = 114 (45.2 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 169
Query: 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 535
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 170 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Score = 94 (38.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 263 VISGSQDNTVMMWD 276
+ S S D TV +WD
Sbjct: 124 LFSASTDKTVAVWD 137
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/143 (21%), Positives = 61/143 (42%)
Query: 380 SITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTD 437
++T SD +I++ +D I+ +D+R L G + + + + +L+ + D
Sbjct: 198 AVTFNDTSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 256
Query: 438 ECLRLFDK---ATGE-LLEEYKG--HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
+R++D A E ++ ++G H + C S+I GS+D +Y W
Sbjct: 257 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 316
Query: 492 SSQISTLIHSVGKAVVNSLCSHP 514
+ L G +N + HP
Sbjct: 317 RRILYKLPGHAGS--INEVAFHP 337
Score = 65 (27.9 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
P+ H +V C KF+ + S + S D +++W+V
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 95
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 178 (67.7 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 83/345 (24%), Positives = 146/345 (42%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ--IASGASDKS 229
F D Y TC +DKK+K+WN L Y H +VN Q +A+ + D
Sbjct: 665 FSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTY 724
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-HPIQVR 288
+ LW++ H + V+ +F+ + + S S D TV +W+V S + I+++
Sbjct: 725 IKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIK 784
Query: 289 CLNEALKEARDSITSVHSLVKSTK-NHLSNGLLT----KLVFAFRCKYLNGLLSGVLMST 343
+ + A + V LVK + S+ +L KL+ F N LL+ V++S
Sbjct: 785 ---DFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLL-FDVTTSN-LLTQVIISH 839
Query: 344 QHLMVLLDFLGSTQIGDVT----PISIHN-SCFQALKEARDSITSVHV----SDHEI-LT 393
+ DF ++ V I + N + + R + VH SD + LT
Sbjct: 840 HSTIQYCDFCAGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLT 899
Query: 394 ASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEE 453
+S D IR ++ +D V + +D F IL + ++L + T ++ +
Sbjct: 900 SSEDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQ 959
Query: 454 YKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQIST 497
+ +S I CC S+D + G +G I +L+D +++
Sbjct: 960 TEPQES---LICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTS 1001
Score = 143 (55.4 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F D +CG+DK ++++ L H E+ T + D +A+ ++DK
Sbjct: 620 HACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADK 679
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSR 280
V +W TG+ + + EH +V C +FN ++ + S D + +WD+K +
Sbjct: 680 KVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDK 733
Score = 135 (52.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 45/145 (31%), Positives = 68/145 (46%)
Query: 153 RPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRN--LLLKTYGGHAHEVN 210
R LT +RE + S + H RF D ++ D I++WN N + LK GH +
Sbjct: 997 RVLT-SREAYRTS-VQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVFLK---GHKEAIK 1051
Query: 211 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 270
D A ++S++ S + D +V +W +TTG+ + + H V + D S S S D
Sbjct: 1052 DF-AFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADK 1110
Query: 271 TVMMWDVKSRS--H----HPIQVRC 289
T +W +S S H H VRC
Sbjct: 1111 TAKIWSFESSSVLHELKGHEACVRC 1135
Score = 76 (31.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 26/115 (22%), Positives = 50/115 (43%)
Query: 420 VDAC-FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCG 478
V C FT DCQ +++ + D +++++ E + KGHK I+ ++S++
Sbjct: 1009 VQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEA---IKDFAFLENSKLLSW 1064
Query: 479 SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
S DG + W + G AV++ S + ++ K+W+ E
Sbjct: 1065 SFDGTVKVWNITTGKTEKDFACHRG-AVLSCAVSPDGSRFSSTSADKTAKIWSFE 1118
Score = 52 (23.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 33/154 (21%), Positives = 67/154 (43%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGEP-IVDAC-FTRDCQCILTCSTDECLRLFD-KAT 447
+ T S D I+ +D++ G V C F+ + I +CSTD ++L++ +
Sbjct: 716 LATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSA 775
Query: 448 GELLE-EYKGH-KSGDFR-------IECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 498
EL E K ++ D + ++CC S+ S + K+ + + S+ ++ +
Sbjct: 776 NELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQV 835
Query: 499 IHSVGKAVVN-SLCSHPTRKHI-MSACGNNVKLW 530
I S + C+ + +S C +++LW
Sbjct: 836 IISHHSTIQYCDFCAGDELVAVALSHC--SIELW 867
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 140 (54.3 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 181 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP 240
T SD IK+W+ L T GH ++ A S +AS + DK++ +W+
Sbjct: 71 TSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCS 130
Query: 241 VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
VR + H + V+ + FN ++++SGS D TV +W+++
Sbjct: 131 VRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQ 168
Score = 75 (31.5 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 25/110 (22%), Positives = 51/110 (46%)
Query: 369 SCFQALKEARDSITSVHVSDHEIL--TASLDCRIRRYDIRTGNLV---TDYVGEPIVDAC 423
+C + L + I SV +S L TAS D R +D+ +G + + + P+ +
Sbjct: 171 TCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQ 230
Query: 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC-CLDSKD 472
FT + + +L + + +RL+D ++ + H + + + C SK+
Sbjct: 231 FTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSWDCYSSKN 280
Score = 66 (28.3 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
+++ S DE +R+++ G L H + D + S DG W ++
Sbjct: 153 LVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADG--TLCATASYDGMARIWDVL 210
Query: 491 DSSQISTLIHSVGKAVVNSLCSHPTRKHIM-SACGNNVKLW 530
+ TL+ + + N L RK+++ S + ++LW
Sbjct: 211 SGQCLKTLVEPINVPLSN-LQFTENRKYLLVSNLNSQIRLW 250
>ZFIN|ZDB-GENE-050522-296 [details] [associations]
symbol:wdr16 "WD repeat domain 16" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050522-296
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:146845 HOVERGEN:HBG055224 EMBL:BC095635
IPI:IPI00493492 RefSeq:NP_001018475.1 UniGene:Dr.80804
ProteinModelPortal:Q502N0 STRING:Q502N0 GeneID:553666
KEGG:dre:553666 InParanoid:Q502N0 NextBio:20880399
ArrayExpress:Q502N0 Uniprot:Q502N0
Length = 617
Score = 126 (49.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
F DG + +D KI+++ P L L + H+ V A D +I SG + V
Sbjct: 379 FMRDGRSIFSAWNDGKIRVFTPESGKLKLIIHNAHSMAVTTIAATNDCKRIVSGGGEGQV 438
Query: 231 ILWEV--TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+WE+ + + + +EH + V C+K + ++ S D ++WD+
Sbjct: 439 RVWEIFQDSYRLIETMKEHKATVNCIKIKSNDKECVTASSDGACIIWDL 487
Score = 96 (38.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 26/112 (23%), Positives = 53/112 (47%)
Query: 380 SITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE---PIVDACFTRDCQCILTCST 436
S+ H +++I+T+ D +I +++ G+ + + G I + D + +T
Sbjct: 503 SVVCYHPEEYQIITSGTDRKIGYWEVYDGSAIRELEGSLSGSINGMHISEDGKYFVTGGD 562
Query: 437 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
D+ L+L+ + GE+ GH + C +S+ I S+DG I +W+
Sbjct: 563 DKLLKLWLYSDGEVTHVGIGHSGSITNVRICPNSR--YIVSTSADGAILRWR 612
Score = 79 (32.9 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 204 GHAHEVNDATAACDSSQIASG-----ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 258
GH + V+ + + IASG VI+W+ + R H +KV + F+
Sbjct: 59 GHTNNVSCISVSKSGRYIASGQVTFMGFKADVIIWDYEKKEIYARLLLHKAKVEDLSFSP 118
Query: 259 DSSVVIS-GSQDN-TVMMWDVKSR 280
+ ++S G QD+ ++++W+++S+
Sbjct: 119 NDKYLVSLGGQDDASIVVWNIESK 142
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 76/300 (25%), Positives = 129/300 (43%)
Query: 244 WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHPIQVRCLNEALKEA 297
+R V CV++ D +++SGS+D TV +WDV SR H V CL+ +
Sbjct: 217 FRATLDSVYCVQY--DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRR-- 272
Query: 298 RDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLL-DFLGST 356
R+ + S S N K+ F + + +L GV++S +++ D
Sbjct: 273 RNLLVSGSSDSTIIIWDWQNRRPLKVYFG----HTDNVL-GVVVSENYIISSSRDHTARV 327
Query: 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSDHE--ILTASLDCRIRRYDIRTGNLVTDY 414
D T S +C L+ S+ SV S I+TAS D +R +DI TG+ +
Sbjct: 328 WRLDAT--SPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRII 385
Query: 415 VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 474
AC + + I++ S+D +R+F+ ++G+LL +GH+ + + D +
Sbjct: 386 HAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHED----LIRTVRFNDEK 441
Query: 475 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 534
I G DG + W Q L +S V H R+ I + + +W ++
Sbjct: 442 IVSGGYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQFDH--RRIIACTHSSEILVWNFDD 499
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 63/283 (22%), Positives = 127/283 (44%)
Query: 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
D + SG+ D++V +W+V + + + H+ V C+ F ++++SGS D+T+++WD
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 277 VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN-GLLTKLVFAFRCKY-LNG 334
++R P++V + + S + ++ S+++H + L A C + L G
Sbjct: 290 WQNR--RPLKVYFGHT--DNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRG 345
Query: 335 LLSGVLMSTQH-----LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDH 389
L+ V S Q+ L+V + + D+T C + + + I +
Sbjct: 346 HLASV-NSVQYSSKTGLIVTASSDRTLRTWDITT----GHCIRIIHAHQRGIACAQYNGK 400
Query: 390 EILTASLDCRIRRYDIRTGNLVTDYVG-EPIVDACFTRDCQCILTCSTDECLRLFDKATG 448
I++ S D IR ++ +G L+ G E ++ D + I++ D +R+++ TG
Sbjct: 401 FIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFND-EKIVSGGYDGTVRIWNFNTG 459
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVD 491
E + H S + R+ L +I + +I W D
Sbjct: 460 E--QHCVLHNSRNSRV-FGLQFDHRRIIACTHSSEILVWNFDD 499
Score = 136 (52.9 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 28/104 (26%), Positives = 56/104 (53%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239
+T SD+ ++ W+ ++ HAH+ A A + I SG+SD ++ ++E ++G+
Sbjct: 363 VTASSDRTLRTWDITTGHCIRII--HAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGK 420
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 283
+R + H + V+FN++ ++SG D TV +W+ + H
Sbjct: 421 LLRMLQGHEDLIRTVRFNDEK--IVSGGYDGTVRIWNFNTGEQH 462
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 58/254 (22%), Positives = 114/254 (44%)
Query: 171 RFPVDGSYC-------LTCGS-DKKIKLWNPY-RNLLLKTYGGHAHEVNDATAACDSSQI 221
R +D YC + GS D+ + +W+ R +L K YG H+ V + +
Sbjct: 218 RATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYG-HSGSVLCLDFCRRRNLL 276
Query: 222 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
SG+SD ++I+W+ +P++ + H V V +E+ +IS S+D+T +W + + S
Sbjct: 277 VSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRLDATS 334
Query: 282 HHPIQVRCLNEALKEARDSITSVHSLVKSTKNHL------SNGLLTKLVFAFRC-KYLNG 334
P + C++ R + SV+S+ S+K L L T + C + ++
Sbjct: 335 --PAEA-CMHVL----RGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHA 387
Query: 335 LLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTA 394
G+ + + ++ GS+ + + + L+ D I +V +D +I++
Sbjct: 388 HQRGIACAQYNGKFIVS--GSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKIVSG 445
Query: 395 SLDCRIRRYDIRTG 408
D +R ++ TG
Sbjct: 446 GYDGTVRIWNFNTG 459
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F DG + + DK ++LWN + + GH V + + DS + SG+ D
Sbjct: 365 HVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDS 424
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
++ +WE+ T + + HA +V V ++ D V+SG +D + +W
Sbjct: 425 TLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 180 LTCGSDK-KIKLWNP-YRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
L GSD + LW P K GH VN + D IAS + DKSV LW T
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
GQ V +R H V V ++ DS +++SGS+D+T+ +W+++++
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK 434
Score = 121 (47.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 196 NLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK 255
N +T GHA V + + D Q+ASG+ D +V LW++ T P+ + H + V V
Sbjct: 99 NRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVA 158
Query: 256 FNEDSSVVISGSQDNTVMMWDVK 278
++ D ++SGS+ + W+ K
Sbjct: 159 WSPDGKHLVSGSKSGEICCWNPK 181
Score = 103 (41.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDAT-----AACDSSQIASGASDK 228
DG + ++ +I WNP + L + GH + + + + + + D
Sbjct: 162 DGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDG 221
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
+W++T + + H VTCVK+ D ++ +GSQD T+ MW+
Sbjct: 222 DARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWE 268
Score = 97 (39.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATG 448
I +AS D +R ++ TG VT + G P+ ++ D + +L+ S D L++++ T
Sbjct: 375 IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK 434
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
+L ++ GH F ++ D + ++ G D + W+
Sbjct: 435 KLKQDLPGHADEVFAVDWSPDGE--KVVSGGKDRVLKLWK 472
Score = 90 (36.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 217 DSSQ-IASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 274
DS + + SG+ D ++ LWE + QP +R H V V F+ D + S S D +V +
Sbjct: 327 DSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRL 386
Query: 275 WD 276
W+
Sbjct: 387 WN 388
Score = 81 (33.6 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 17/66 (25%), Positives = 36/66 (54%)
Query: 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGK 483
F+ D + I + S D+ +RL++ TG+ + ++GH +++ DS+ + GS D
Sbjct: 368 FSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR--LLLSGSKDST 425
Query: 484 IYKWQL 489
+ W++
Sbjct: 426 LKIWEI 431
Score = 70 (29.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 20/92 (21%), Positives = 41/92 (44%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 239
+T D ++W+ + GH V D I +G+ D ++ +WE T G+
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGK 273
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNT 271
+R + H + + + + V+ +G+ D+T
Sbjct: 274 LIRELKGHGHWINSLALSTEY-VLRTGAFDHT 304
Score = 69 (29.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 384 VHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDEC-L 440
VH+S +T+S D R +DI + G + C I+ + +C +
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTI 264
Query: 441 RLFDKATGELLEEYKGH 457
++++ G+L+ E KGH
Sbjct: 265 KMWETTQGKLIRELKGH 281
Score = 55 (24.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 18/71 (25%), Positives = 27/71 (38%)
Query: 428 CQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
C+ +T S D R++D + + GH + C D I+ GS D I W
Sbjct: 211 CRRFVTSSKDGDARIWDITLKKSIICLSGHT---LAVTCVKWGGDGIIYTGSQDCTIKMW 267
Query: 488 QLVDSSQISTL 498
+ I L
Sbjct: 268 ETTQGKLIREL 278
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 165 (63.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 34/125 (27%), Positives = 66/125 (52%)
Query: 156 TVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT-A 214
T+N + + +F +G S+ KI ++N L+ T GH ++D +
Sbjct: 21 TINEPSITFTAI---KFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYS 77
Query: 215 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 274
+S+ +AS + D ++ LW +T + ++ R+H +T +KF + +++ISGS D T+ +
Sbjct: 78 PINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETITI 137
Query: 275 WDVKS 279
WD+ S
Sbjct: 138 WDITS 142
Score = 46 (21.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 413 DYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 456
D + PI + + Q IL S D +RL++ ++ + Y+G
Sbjct: 210 DVINFPIAKVELSPNGQFILNSSLDGKIRLWNYMENKVYKTYQG 253
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 37/103 (35%), Positives = 59/103 (57%)
Query: 180 LTCGSDK-KIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
L GSD + LW+P + L GH +N + DS IAS + DKS+ LW+ T
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
G+ + R H + V + ++ DS +++SGS D+T+ +WDVK++
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/104 (28%), Positives = 47/104 (45%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D + DK IKLW+ L + GH V + DS + SG+SD ++
Sbjct: 380 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
+W+V + HA +V V ++ D V SG +D + +W
Sbjct: 440 VWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 127 (49.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 128 LLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFV------LSG----LMHTRFPVDGS 177
++ SL +T+ E K I +Y+P V R V L G ++ F G
Sbjct: 69 IISSLGKTLESQAVETEKVLDI-IYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGK 127
Query: 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
Y + D ++ W+ T GH H V + + D ++ASG + ++LW+ +T
Sbjct: 128 YLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST 187
Query: 238 GQPV-RRWREHASKVTCVKF-----NEDSSVVISGSQDNTVMMWD 276
G+ V R H+ +T + + N + V S S+D +V +WD
Sbjct: 188 GKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWD 232
Score = 114 (45.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLL-KTYGGHAHEVNDAT-----AACDSSQIASGASDK 228
DG + + +I LW+P + + GH+ + + A + +AS + D
Sbjct: 167 DGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDG 226
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR 288
SV +W+ T G+ R H VTC+++ D ++ S SQD T+ +W R+H + R
Sbjct: 227 SVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW----RAHDGVLCR 281
Query: 289 CL 290
L
Sbjct: 282 TL 283
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 53/198 (26%), Positives = 89/198 (44%)
Query: 145 KEWSIRVYRPLTVNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLWNPYRNLL 198
K+ S+RV+ T R +L+G HT R+ DG + D+ IK+W + +L
Sbjct: 224 KDGSVRVW-DTTAGRCERILTG--HTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVL 279
Query: 199 LKTYGGHAHEVNDATAACDSSQIASGA---SDKSVILWEVTTGQPVRRWREHA-SKVTCV 254
+T GH H VN + D + + +GA ++ SV ++ G ++ +E A S+ V
Sbjct: 280 CRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEASVNAQDLR-GS-LQELKERALSRYNLV 336
Query: 255 KFNEDSSVVISGSQDNTVMMW----DVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310
+ ++SGS D T+ +W D K + +N+ L I + S KS
Sbjct: 337 R-GRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKS 395
Query: 311 TKNHLSNGLLTKLVFAFR 328
K L +G K + + R
Sbjct: 396 IK--LWDGRTGKYLASLR 411
Score = 90 (36.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGK 483
F+ D + I + S D+ ++L+D TG+ L +GH + ++I DS+ + GSSD
Sbjct: 380 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR--LLVSGSSDST 437
Query: 484 IYKWQL 489
+ W +
Sbjct: 438 LKVWDV 443
Score = 80 (33.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 22/100 (22%), Positives = 47/100 (47%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATG 448
I +AS D I+ +D RTG + G + ++ D + +++ S+D L+++D
Sbjct: 387 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 488
+L + GH + ++ D + ++ G D + W+
Sbjct: 447 KLAADLPGHADEVYAVDWSPDGQ--RVASGGKDKCLRIWR 484
Score = 62 (26.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/72 (23%), Positives = 28/72 (38%)
Query: 427 DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK 486
+C+ + + S D +R++D G GH + C D ++ S D I
Sbjct: 215 ECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS---VTCLRWGGDGLLYSASQDRTIKV 271
Query: 487 WQLVDSSQISTL 498
W+ D TL
Sbjct: 272 WRAHDGVLCRTL 283
Score = 54 (24.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 474 QIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSAC-GNNVKLW 530
++ GS D ++ W + + L G +A++N + P + I SA ++KLW
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKK--PLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW 399
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 66/284 (23%), Positives = 126/284 (44%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKS 229
+F +G+ + G D+ I +WN Y + T GH+ V + D S + S ++DK+
Sbjct: 63 KFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKT 122
Query: 230 VILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSR-SHHPIQ- 286
V +W+ TG+ V+R + H S V +C + +GS D TV +WD++ + S H Q
Sbjct: 123 VCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQN 182
Query: 287 -VRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
+ L+ + D I S + K + + KL+++ + ++G+ +S
Sbjct: 183 TYQVLSVTFNDTSDQIIS-GGIDNDIK--VWDLRQNKLIYSMQGH--GDSVTGLSLSADG 237
Query: 346 LMVLLDFL-GSTQIGDVTPISIHNSC---FQA-LKEARDSIT--SVHVSDHEILTASLDC 398
+L + + S ++ D+ P + C FQ + ++ S +I S D
Sbjct: 238 SYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADR 297
Query: 399 RIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECL 440
+ +D T +V G + + F + +L+ S+D+ L
Sbjct: 298 FVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRL 341
Score = 153 (58.9 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 33/112 (29%), Positives = 61/112 (54%)
Query: 175 DGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATAAC----DSSQIASGAS 226
DGSY L+ D +++W+ P+ + +K + G+ H C D S+IA+G++
Sbjct: 236 DGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSA 295
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
D+ V +W+ TT + V + HA V V F+ + +V+SGS D + + +++
Sbjct: 296 DRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ 347
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 165 SG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA- 222
SG +M + DGS + +DK + +W+ +K GH VN A Q+A
Sbjct: 99 SGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLAC 158
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+G+ D +V LW++ V + ++ +V V FN+ S +ISG DN + +WD++
Sbjct: 159 TGSDDGTVKLWDIRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLR 213
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 165 SGLMHTRFPVDGSYCLTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+ +++ FP L C GSD +KLW+ + + T+ + ++V T S QI
Sbjct: 141 TSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQII 199
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
SG D + +W++ + + + H VT + + D S ++S S DN+V +WD++
Sbjct: 200 SGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIR 255
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 38/145 (26%), Positives = 63/145 (43%)
Query: 145 KEWSIRVYRPL-TVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG 203
K W IR + T VLS F ++ G D IK+W+ +N L+ +
Sbjct: 167 KLWDIRKKASVHTFQNTYQVLS----VTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQ 222
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWRE------HASKVTCVK-- 255
GH V + + D S + S + D SV +W++ P R + H + ++
Sbjct: 223 GHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCS 282
Query: 256 FNEDSSVVISGSQDNTVMMWDVKSR 280
++ D S + +GS D V +WD +R
Sbjct: 283 WSADGSKIAAGSADRFVYIWDTTTR 307
Score = 113 (44.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 102 VMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTS--FVNSCFPARRGPQLACT 159
Query: 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 535
GS DG + W + + + T ++ V S+ + T I+S N++K+W ++
Sbjct: 160 GSDDGTVKLWDIRKKASVHTFQNTYQ---VLSVTFNDTSDQIISGGIDNDIKVWDLRQN 215
Score = 104 (41.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 44/189 (23%), Positives = 83/189 (43%)
Query: 354 GSTQIGDVTP-ISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVT 412
G+ ++ D+ S+H FQ + S+T SD +I++ +D I+ +D+R L+
Sbjct: 164 GTVKLWDIRKKASVHT--FQNTYQVL-SVTFNDTSD-QIISGGIDNDIKVWDLRQNKLIY 219
Query: 413 DYVG--EPIVDACFTRDCQCILTCSTDECLRLFDK---ATGE-LLEEYKG--HKSGDFRI 464
G + + + D +L+ S D +R++D A E ++ ++G H +
Sbjct: 220 SMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLL 279
Query: 465 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG 524
C + S+I GS+D +Y W + L G VN + HP ++S
Sbjct: 280 RCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGS--VNEVAFHPEEPIVLSGSS 337
Query: 525 NNVKLWTAE 533
+ +L+ E
Sbjct: 338 DK-RLYIGE 345
Score = 91 (37.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH EV + + +AS D+ +++W V + + H+ V + +N D S+
Sbjct: 54 GHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSL 113
Query: 263 VISGSQDNTVMMWD 276
+ S S D TV +WD
Sbjct: 114 LFSASTDKTVCVWD 127
Score = 70 (29.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 211 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 270
+ AA S Q+++ +S L P+ H +V C KF+ + + + S D
Sbjct: 24 ELVAAAQSQQLSAMGPPRSSSLQA-----PIMLLSGHEGEVYCCKFHPNGATLASSGYDR 78
Query: 271 TVMMWDV 277
++MW+V
Sbjct: 79 LILMWNV 85
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 131 (51.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVN--DATAAC-----DSSQI-- 221
RF +G++ + ++K+WN ++ + GH V+ D C DS Q+
Sbjct: 179 RFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTL 238
Query: 222 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
A+GA+D +V LW+ + P+ R H ++V V F+ ++S S D T +WDV
Sbjct: 239 ATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDV 294
Score = 127 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 25/110 (22%), Positives = 54/110 (49%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G Y ++ D +LW+ + + L GH+ + D S ++SG +D
Sbjct: 273 FHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGR 332
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
+W++ +G+ + EH ++ + ++ + + + S D+TV +WD++ S
Sbjct: 333 IWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVS 382
Score = 85 (35.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 32/104 (30%), Positives = 49/104 (47%)
Query: 431 ILTCSTDECLRLFDKATG-ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD--GKIYKW 487
+++ S D RL+D TG ELL + +GH G F I C D S + G +D G+I W
Sbjct: 280 LVSASFDTTWRLWDVHTGVELLMQ-EGHSEGIFSIACQPDG--SLVSSGGNDAIGRI--W 334
Query: 488 QLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM-SACGNNVKLW 530
L I L + + V ++ P + S+ + VK+W
Sbjct: 335 DLRSGKSIMVLDEHIRQIV--AMAWSPNGYQLATSSADDTVKIW 376
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 39/111 (35%), Positives = 58/111 (52%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
TRF D S L+C D I+ W+ + N +L Y GHA+ V D + S AS + D
Sbjct: 348 TRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVL--YQGHAYPVWDLDISPCSLYFASASHD 405
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
++ LW P+R + H V CVKF+ +S+ + +GS D TV +W +
Sbjct: 406 RTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQ 456
Score = 169 (64.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 30/109 (27%), Positives = 60/109 (55%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F + +Y T +DK ++LW+ + ++ + GH V + + +AS D+ +
Sbjct: 433 KFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRL 492
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
LW++ +G + R H +T + F+ DSS++ S S DN+V +WD+++
Sbjct: 493 KLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN 541
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
Y + D+ +LW+ R L+ Y GH +V+ +S+ +A+G++DK+V LW
Sbjct: 398 YFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 457
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
G VR + H V + F+ + + S +D + +WD+ S
Sbjct: 458 GNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLAS 499
Score = 108 (43.1 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE--PIVDACFTRDCQCILTCSTDECLRL 442
H + + + T S D +R + + GN V + G P++ F+ + + + + D+ L+L
Sbjct: 435 HPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKL 494
Query: 443 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 489
+D A+G L +E +GH I S DS + +S D + W +
Sbjct: 495 WDLASGTLYKELRGHTDN---ITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 88 (36.0 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 32/114 (28%), Positives = 51/114 (44%)
Query: 167 LMHTRFPVDGSYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
L++T S L G D +KLW+ R+ LK+ H +V+ ACD
Sbjct: 270 LLNTAEISPNSKLLAAGFDNSCVKLWS-LRSKKLKSEP-HLVDVSRIRLACDILDEEEEE 327
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
D + G ++ R H V +F DSS ++S S+D ++ WD++S
Sbjct: 328 DDSA--------GTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRS 373
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 74/321 (23%), Positives = 134/321 (41%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L + + GH ++ A ++ Q+A+G+ DKS+++W + R+ H +T V F
Sbjct: 10 LERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFA 69
Query: 258 EDSSVVISGSQDNTVMMW--DVKSRSH----HPIQVRCLNEALKEARDSITSVHSLVKST 311
S+V S S+D TV +W +K S H VR ++ + ++ + +T+ KS
Sbjct: 70 PSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFS-RDGQRLVTASDD--KSV 126
Query: 312 KNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF 371
K + K +++ ++ N + L+ + ++ D S H C
Sbjct: 127 K--VWGVERKKFLYSLN-RHTNWVRCARFSPDGRLIASCGDDRTVRLWDT---SSHQ-CI 179
Query: 372 QALKEARDSITSVHVSDHEILTAS--LDCRIRRYDIRTGNLVTDYVGEPIVDACFT--RD 427
+ S T V + AS D I+ +DIRT L+ Y CF+
Sbjct: 180 NIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPS 239
Query: 428 CQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYK 486
+++ S+D +++ D G L+ GHK + S+D +F G +D ++
Sbjct: 240 GNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTF---SRDGDLFASGGADSQVLM 296
Query: 487 WQL-VDSSQISTLIHSVGKAV 506
W+ DS L+ K V
Sbjct: 297 WKTNFDSLNYRELLSKHSKRV 317
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 36/139 (25%), Positives = 68/139 (48%)
Query: 145 KEWSIRVYRPLTVNRELFVL----SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLK 200
++ ++R++ P ++ E V + + F DG +T DK +K+W R L
Sbjct: 80 RDQTVRLWTP-SIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLY 138
Query: 201 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS 260
+ H + V A + D IAS D++V LW+ ++ Q + + ++ T V FN
Sbjct: 139 SLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSG 198
Query: 261 SVVISGSQDNTVMMWDVKS 279
+ + S DNT+ +WD+++
Sbjct: 199 TCIASSGADNTIKIWDIRT 217
Score = 164 (62.8 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 38/131 (29%), Positives = 70/131 (53%)
Query: 157 VNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKT---YGGHAH 207
V R+ F+ S HT RF DG +CG D+ ++LW+ + + YGG A
Sbjct: 131 VERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 208 EVN-DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 266
V+ +++ C IAS +D ++ +W++ T + ++ ++ H + V C F+ + +ISG
Sbjct: 191 FVDFNSSGTC----IASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISG 246
Query: 267 SQDNTVMMWDV 277
S D+T+ + D+
Sbjct: 247 SSDSTIKILDL 257
Score = 136 (52.9 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 32/125 (25%), Positives = 55/125 (44%)
Query: 163 VLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
V++G+ F GS + D+ ++LW P + H V + D ++
Sbjct: 62 VITGV---NFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLV 118
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+ + DKSV +W V + + H + V C +F+ D ++ S D TV +WD S H
Sbjct: 119 TASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSS--H 176
Query: 283 HPIQV 287
I +
Sbjct: 177 QCINI 181
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 29/104 (27%), Positives = 51/104 (49%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F G+ + G+D IK+W+ N L++ Y H VN + + + SG+SD ++
Sbjct: 194 FNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIK 253
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
+ ++ G+ + H V V F+ D + SG D+ V+MW
Sbjct: 254 ILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 120 (47.3 bits), Expect = 0.00052, P = 0.00052
Identities = 32/117 (27%), Positives = 52/117 (44%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS DK + +WN + GH + A S +AS + D++V LW +
Sbjct: 33 LATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIK 92
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SRSHHPIQVRC 289
++ H + V V F+ D +++ S D +V +W V+ S + H VRC
Sbjct: 93 GESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRC 149
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 165 (63.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG +T DK IK+W +R L + H + V A + D IAS + DK+V
Sbjct: 112 FSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVK 171
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR---SHHPIQVR 288
LW+ T+ + + + EH V+F+ + + + D TV +WDV+ H+ +
Sbjct: 172 LWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTA 231
Query: 289 CLN 291
+N
Sbjct: 232 AVN 234
Score = 163 (62.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 70/302 (23%), Positives = 120/302 (39%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L + + GH + + + Q+ASG+ D + +W + H V CV+F+
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 258 EDSSVVISGSQDNTVMMW--DVKSRSH----HPIQVRCLNEALKEARDSIT-SVHSLVKS 310
+V SGS+D TV +W VK S H VR ++ + + + +T S +K
Sbjct: 72 PSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFS-SDGQSLVTASDDKTIKV 130
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPIS-IHNS 369
H K +F+ +++N + L+ + ++ D T IH+
Sbjct: 131 WTVHRQ-----KFLFSLS-QHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSF 184
Query: 370 CFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPIVDAC-FTRD 427
C + H S I A D ++ +D+R L+ Y V V++ F
Sbjct: 185 CEHG---GFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPS 241
Query: 428 CQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYK 486
++T S D L++ D G LL GH+ C S+ F G SD ++
Sbjct: 242 GNYLITASNDSTLKILDLLEGRLLYTLHGHQGP---ATCVAFSRTGDFFASGGSDEQVMV 298
Query: 487 WQ 488
W+
Sbjct: 299 WK 300
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
H F G+ G+DK +K+W+ N LL+ Y H VN + + + + ++D
Sbjct: 193 HVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDS 252
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
++ + ++ G+ + H TCV F+ SG D VM+W
Sbjct: 253 TLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 73/295 (24%), Positives = 122/295 (41%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D +K+W+ + GH V + +ASG+ DK+V LW +
Sbjct: 35 LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVK 94
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SRSHHPIQVRCLNE 292
++ H + V V F+ D +++ S D T+ +W V S S H VRC
Sbjct: 95 GESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARF 154
Query: 293 ALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352
+ + R I S S K+ K L + + + +F C++ G + V +
Sbjct: 155 S-PDGR-LIASA-SDDKTVK--LWDKTSRECIHSF-CEH-GGFANHVEFHPSGTCIAAAG 207
Query: 353 LGST-QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV 411
T ++ DV + +Q A +S+ S H S + ++TAS D ++ D+ G L+
Sbjct: 208 TDKTVKVWDVRMNRLLQH-YQVHTAAVNSL-SFHPSGNYLITASNDSTLKILDLLEGRLL 265
Query: 412 TDYVGE--PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG----HKSG 460
G P F+R + +DE + ++ T +Y G HKSG
Sbjct: 266 YTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK--TNFSAADYDGVLKTHKSG 318
Score = 136 (52.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 32/128 (25%), Positives = 62/128 (48%)
Query: 156 TVNRELFVLSGLMH------TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV 209
TV+R+ F+ S H RF DG + DK +KLW+ + ++ H
Sbjct: 132 TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFA 191
Query: 210 NDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 269
N + IA+ +DK+V +W+V + ++ ++ H + V + F+ + +I+ S D
Sbjct: 192 NHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASND 251
Query: 270 NTVMMWDV 277
+T+ + D+
Sbjct: 252 STLKILDL 259
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
+M +F G + DK + LW P + H V + D + + +
Sbjct: 65 VMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASD 124
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
DK++ +W V + + +H + V C +F+ D ++ S S D TV +WD SR
Sbjct: 125 DKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSR 178
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 88/388 (22%), Positives = 159/388 (40%)
Query: 128 LLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVL---SGLM-HTR------FPVDGS 177
++ SL +T+ E K I +Y+P V R V S L HT F G
Sbjct: 82 IVVSLEKTLAGQAVETEKVLDI-IYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPTGK 140
Query: 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
Y + D ++ W+ T GH H V + D ++ASG + + LW+ T
Sbjct: 141 YLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPAT 200
Query: 238 GQPVRR-WREHASKVTCV-----KFNEDSSVVISGSQDNTVMMWDV------KSRSHHPI 285
G + R H+ +TC+ N + + S S+D ++ +WD K + H
Sbjct: 201 GNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQ 260
Query: 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLS-NGLLTKLVFAFRCKYLNGLLSGVLMSTQ 344
V C+ K D + S ++ K S +G+L + + ++N + +ST
Sbjct: 261 SVTCV----KWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQG-HAHWVNTMA----LSTD 311
Query: 345 HLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHE-ILTASLDCRIRRY 403
+++ F + + P + S + +A+ V E +++ S D + +
Sbjct: 312 YVLRTGAFEPAE--ATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLW 369
Query: 404 ----DIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKS 459
D + +T + I F+ D + I + S D+ ++L++ TG+ L +GH S
Sbjct: 370 RPAEDKKPLERMTGHQAL-INQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVS 428
Query: 460 GDFRIECCLDSKDSQIFCGSSDGKIYKW 487
++I DS+ + GSSD + W
Sbjct: 429 AVYQIAWSADSR--LLVSGSSDSTLKVW 454
Score = 157 (60.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 36/103 (34%), Positives = 58/103 (56%)
Query: 180 LTCGSDK-KIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
L GSD + LW P + L+ GH +N + D+ IAS + DKS+ LWE T
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRT 416
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
G+ + R H S V + ++ DS +++SGS D+T+ +WD +++
Sbjct: 417 GKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETK 459
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 33/134 (24%), Positives = 59/134 (44%)
Query: 146 EWSIRVYRPLTVNRELFVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKT 201
++++ ++RP + L ++G + F D + DK IKLW L +
Sbjct: 363 DFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTS 422
Query: 202 YGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS 261
GH V + DS + SG+SD ++ +W+ T + HA +V ++ D
Sbjct: 423 LRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQ 482
Query: 262 VVISGSQDNTVMMW 275
V SG +D + +W
Sbjct: 483 RVASGGKDKCLRIW 496
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 166 (63.5 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 36/126 (28%), Positives = 59/126 (46%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F DG +T DK IK+W+ +R L + H H V A + D I S + DK++
Sbjct: 110 FSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS---HHPIQ-- 286
+W+ T Q V + + V FN + + + S D+ V +WD++ H+ +
Sbjct: 170 IWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSC 229
Query: 287 -VRCLN 291
V CL+
Sbjct: 230 GVNCLS 235
Score = 147 (56.8 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 38/156 (24%), Positives = 77/156 (49%)
Query: 138 RILYELPKEWSIRVYRPLTVNRELFVLSGLMHT------RFPVDGSYCLTCGSDKKIKLW 191
++L ++ SI+V+ ++ R+ F+ S HT +F DG ++C DK IK+W
Sbjct: 115 QLLVTASEDKSIKVW---SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 192 NPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV 251
+ + + N + + IAS SD +V +W++ + ++ ++ H+ V
Sbjct: 172 DTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGV 231
Query: 252 TCVKFNEDSSVVISGSQDNTVMMWD-VKSRSHHPIQ 286
C+ F+ + +++ S D TV M D ++ R + +Q
Sbjct: 232 NCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQ 267
Score = 131 (51.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+F G+ + D+ ++LW R + H V + D + + + DKS+
Sbjct: 67 QFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSI 126
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+W + + + H V C KF+ D +++S S+D T+ +WD ++
Sbjct: 127 KVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 28/104 (26%), Positives = 54/104 (51%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F +G+ + GSD +K+W+ N LL+ Y H+ VN + + + + +SD +V
Sbjct: 194 FNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVK 253
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
+ ++ G+ + + H V V F++D ++ SG D V++W
Sbjct: 254 MLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 107 (42.7 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 197 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF 256
+L +++ GH + A + + QIA+ + D ++LW + R+ H VT ++F
Sbjct: 9 ILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQF 68
Query: 257 NEDSSVVISGSQDNTVMMW--DVKSRS 281
+ +++ S S+D TV +W D K +S
Sbjct: 69 SPQGNLLASASRDRTVRLWVLDRKGKS 95
Score = 84 (34.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 391 ILTASLDCRIRRYDIRTGNLV---TDYVG-EPIVDACFTRDCQCILTCSTDECLRLFDKA 446
I++ S D I+ +D V +D VG VD F + CI + +D ++++D
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD--FNPNGTCIASAGSDHAVKIWDIR 216
Query: 447 TGELLEEYKGHKSGDFRIECC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 498
+LL+ Y+ H G + C + + SSDG + L++ I TL
Sbjct: 217 MNKLLQHYQVHSCG---VNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTL 266
Score = 80 (33.2 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGEPIVDAC--FTRDCQCILTCSTDECLRLFDKATG 448
I +A D ++ +DIR L+ Y C F ++T S+D +++ D G
Sbjct: 201 IASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG 260
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ 488
L+ +GH F + SKD ++ G +D ++ W+
Sbjct: 261 RLIYTLQGHTGPVFTVSF---SKDGELLTSGGADAQVLIWR 298
Score = 71 (30.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 381 ITSVHVS-DHEIL-TASLDCRIRRYDI-RTGNLVTDYVGEPIVD-ACFTRDCQCILTCST 436
+ SV S D ++L TAS D I+ + + R L + Y V A F+ D + I++CS
Sbjct: 105 VRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 437 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIS 496
D+ ++++D + + + S F + + I SD + W + + +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSD--SVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQ 222
Query: 497 TL-IHSVGKAVVNSLCSHPTRKHIMSACGNN-VKL 529
+HS G VN L HP +++A + VK+
Sbjct: 223 HYQVHSCG---VNCLSFHPLGNSLVTASSDGTVKM 254
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 53/205 (25%), Positives = 98/205 (47%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
+F +GS + G D+ I LW+ Y + T GH+ V + D S + S ++DK+
Sbjct: 74 KFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKT 133
Query: 230 VILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVR 288
V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++ IQ
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQTF 191
Query: 289 CLNEALKEARDSITSVHSLVKSTKNHLSNGLL--TKLVFAFRCKYLNGLLSGVLMSTQHL 346
+ + TS + N + L KL + R + + + +G+ +S++
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR-GHADSV-TGLSLSSEGS 249
Query: 347 MVLLDFLGST-QIGDVTPISIHNSC 370
+L + + +T ++ DV P + C
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERC 274
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 165 SG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IA 222
SG +M + DGS + +DK + +W+ +K GH VN A Q +
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD++
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK- 227
Query: 283 HPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGL 319
L ++ DS+T + SL LSN +
Sbjct: 228 -------LTYTMRGHADSVTGL-SLSSEGSYLLSNAM 256
Score = 143 (55.4 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 165 SGLMHTRFPVDGSYCLTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+ +++ +P L C GSD +KLW+ + ++T+ + ++V T S QI
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII 210
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
SG D + +W++ + R HA VT + + + S ++S + DNTV +WDV+
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 114 (45.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 477
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 535
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 94 (38.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 263 VISGSQDNTVMMWD 276
+ S S D TV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 68 (29.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/116 (22%), Positives = 53/116 (45%)
Query: 380 SITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTD 437
++T SD +I++ +D I+ +D+R L G + + + + +L+ + D
Sbjct: 199 AVTFNDTSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 438 ECLRLFDK---ATGE-LLEEYKG--HKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
+R++D A E ++ ++G H + C S+I GS+D +Y W
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPW 313
Score = 64 (27.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 240 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
P+ H +V C KF+ + S + S D +++W V
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSV 96
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
Y +T D I+LW L+T+ GH V A A D+ +I SGA D+ + +W+ T
Sbjct: 581 YMVTSALDSTIRLWETTTGRCLRTFFGHLEGVW-ALGA-DTLRIVSGAEDRMIKIWDPRT 638
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
G+ R + H+ VTC+ + S +GS+D V M+ +S
Sbjct: 639 GKCERTFTGHSGPVTCIGLGD--SRFATGSEDCEVRMYSFQS 678
Score = 134 (52.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 191 WNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK 250
W Y +KT+ GH + V + + +A+G+ D ++ +W+ TG+ +R R H S
Sbjct: 335 WK-YGRCSIKTFKGHTNGV--MCLQFEDNILATGSYDTTIKIWDTETGEELRTLRGHESG 391
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWD 276
+ C++F D + +ISGS D T+ +W+
Sbjct: 392 IRCLQF--DDTKLISGSMDRTIKVWN 415
Score = 131 (51.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS D IK+W+ L+T GH + D +++ SG+ D+++ +W TG
Sbjct: 362 LATGSYDTTIKIWDTETGEELRTLRGHESGIR--CLQFDDTKLISGSMDRTIKVWNWRTG 419
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
+ + + H V + F D+S++ SGS D TV +W+ + +S
Sbjct: 420 ECISTYTGHRGGVIGLHF--DASILASGSVDKTVKIWNFEDKS 460
Score = 131 (51.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 224
SG+ +F D + ++ D+ IK+WN + TY GH V D+S +ASG
Sbjct: 390 SGIRCLQF--DDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGV--IGLHFDASILASG 445
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
+ DK+V +W + R H V V+ + S V S S D TV +WD+ +++
Sbjct: 446 SVDKTVKIWNFED-KSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKT 501
Score = 88 (36.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS DK +K+WN + + + GH VN S + S + D +V LW++ T
Sbjct: 442 LASGSVDKTVKIWN-FEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTK 500
Query: 239 QPVRRWREHASKV 251
+R + H +V
Sbjct: 501 TCIRTFHGHVGQV 513
Score = 85 (35.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL 450
++T++LD IR ++ TG + + G D I++ + D ++++D TG+
Sbjct: 582 MVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTLRIVSGAEDRMIKIWDPRTGKC 641
Query: 451 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI--YKWQ 488
+ GH SG C+ DS+ GS D ++ Y +Q
Sbjct: 642 ERTFTGH-SGPVT---CIGLGDSRFATGSEDCEVRMYSFQ 677
Score = 52 (23.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 36/177 (20%), Positives = 69/177 (38%)
Query: 370 CFQALKEARDSITSVHVSDHEILTASLDCRIRRY---DIRTGNLV--TDYVGEPIVDAC- 423
C R + +H + + S+D ++ + D T +L TD+V VD
Sbjct: 421 CISTYTGHRGGVIGLHFDASILASGSVDKTVKIWNFEDKSTFSLRGHTDWVNAVRVDTSS 480
Query: 424 ---FTR--DCQCIL-TCSTDECLRLFDKATGELLEEYKGHKSGDFR---IECCLDSKDSQ 474
F+ DC L T C+R F G++ + + +F EC ++ D
Sbjct: 481 RTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAEC--ENDDLS 538
Query: 475 IFCGSSDGKIYKWQL-VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
G +D + + ++ + + + G + N + P R + SA + ++LW
Sbjct: 539 TTSGDADPPSIQASMGLEPNAAYSQSSAFGTSFDNGRAA-PPRYMVTSALDSTIRLW 594
Score = 50 (22.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 381 ITSVHVSDHEILTASLDCRIRRYDIRT 407
+T + + D T S DC +R Y ++
Sbjct: 652 VTCIGLGDSRFATGSEDCEVRMYSFQS 678
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 30/108 (27%), Positives = 52/108 (48%)
Query: 175 DGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHE---VNDATAACDSSQIASGASDK 228
DG + + S ++I LW+ ++ L + GH + DSS IASG+ D
Sbjct: 408 DGKFFIVNLSCQEIHLWDLAGEWKQPL--KFSGHRQSKYVIRSCFGGLDSSFIASGSEDS 465
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFN-EDSSVVISGSQDNTVMMW 275
V +W + +P+ H+ V CV +N ++ ++ S S D T+ +W
Sbjct: 466 QVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 114 (45.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 27/111 (24%), Positives = 57/111 (51%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGH--AHEVNDATAACDSSQIASGASD--KSV 230
D + LTCG+ + +KLW+ +L T+G + V+ DS+++ G+SD + +
Sbjct: 280 DDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGI 339
Query: 231 ILWEVTTGQPVRRWR-EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
++W+ T G ++ WR KV + D +I+ D + + +++++
Sbjct: 340 VMWD-TDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETK 389
Score = 103 (41.3 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 39/159 (24%), Positives = 78/159 (49%)
Query: 379 DSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQC-ILTCSTD 437
+S+ +V SD EI +L+ ++ R ++++ +PI + D + I+ S
Sbjct: 370 ESMITVF-SDKEIRILNLETKVER-------VISEE--QPITSLSISGDGKFFIVNLSCQ 419
Query: 438 ECLRLFDKATGELLE--EYKGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQ 494
E + L+D A GE + ++ GH+ + I C DS I GS D ++Y W L ++
Sbjct: 420 E-IHLWDLA-GEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKP 477
Query: 495 ISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 530
+ L HS+ VN + +P ++++ ++ +++W
Sbjct: 478 LEVLSGHSM---TVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 80 (33.2 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 29/114 (25%), Positives = 52/114 (45%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPY--RNLLLK-TYGGHAHEVNDATAACDSSQIASGASD 227
+F G Y T SD +W + LK T H + V+ + + D +++ + +
Sbjct: 231 QFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNA 290
Query: 228 KSVILWEVTTGQPVRRWREHASKVT---CVKFNEDSSVVISGSQD--NTVMMWD 276
+ + LW+V TG + + + T C F DS+ ++ GS D ++MWD
Sbjct: 291 EVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWF-PDSTRLVCGSSDPERGIVMWD 343
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR---RWREHASKVTCVKFNEDSS 261
H +EV + +A+ +SD + I+W+V V H + V+ V ++ D +
Sbjct: 223 HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDT 282
Query: 262 VVISGSQDNTVMMWDV 277
+++ + +WDV
Sbjct: 283 KLLTCGNAEVLKLWDV 298
>POMBASE|SPAC4D7.05 [details] [associations]
symbol:sum1 "translation initiation factor eIF3i"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006413 "translational
initiation" evidence=IMP] [GO:0016282 "eukaryotic 43S preinitiation
complex" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0065007 "biological regulation" evidence=NAS]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IDA] [GO:0071541 "eukaryotic translation initiation
factor 3 complex, eIF3m" evidence=IDA] [GO:0003743 "translation
initiation factor activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC4D7.05 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0071470 GO:GO:0003743 GO:GO:0034399 GO:GO:0065007
GO:GO:0002183 GO:GO:0016282 GO:GO:0071540 GO:GO:0071541
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 OMA:ATVAGWS
OrthoDB:EOG44QX8Q EMBL:Y09529 EMBL:D89187 PIR:T38796 PIR:T42745
PIR:T46558 RefSeq:NP_594958.1 ProteinModelPortal:P79083
STRING:P79083 PRIDE:P79083 EnsemblFungi:SPAC4D7.05.1 GeneID:2543537
KEGG:spo:SPAC4D7.05 NextBio:20804546 Uniprot:P79083
Length = 328
Score = 149 (57.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 167 LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
L ++ DG +C DK I +W + L TY GH + S+ + SGA+
Sbjct: 13 LTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAA 72
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 269
D ++ LW+V TG+ + +W E + V V+FNED + +++ +++
Sbjct: 73 DNTMRLWDVKTGKQLYKW-EFPTAVKRVEFNEDDTRILAVTEE 114
Score = 109 (43.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 263
GH + D + S A DK + +W G+ + + H + N+ S+++
Sbjct: 8 GHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLM 67
Query: 264 ISGSQDNTVMMWDVKS 279
+SG+ DNT+ +WDVK+
Sbjct: 68 VSGAADNTMRLWDVKT 83
Score = 58 (25.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 475 IFCGSSDGKIYKWQLVDSSQI-STLIHSVGKAVVNSLCSHPTRKHIMSAC 523
+F G DG + ++ + + S +H+ G + + L +P R + +++C
Sbjct: 162 LFTGHEDGSVSRYDAITGEFVESKQVHNSGSTITD-LQFYPDRTYFITSC 210
Score = 54 (24.1 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 20/84 (23%), Positives = 34/84 (40%)
Query: 375 KEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV-TDYV---GEPIVDACFTRDCQC 430
+E++ ++ + T D + RYD TG V + V G I D F D
Sbjct: 146 RESKATVAGWSYLSKFLFTGHEDGSVSRYDAITGEFVESKQVHNSGSTITDLQFYPDRTY 205
Query: 431 ILTCSTDECLRLFDKATGELLEEY 454
+T D + D + E+++ Y
Sbjct: 206 FITSCKDTTAKAIDVDSFEVIKTY 229
Score = 46 (21.3 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 431 ILTCSTDECLRLFDKATGELLEEYKGHKSG 460
+ T D + +D TGE +E + H SG
Sbjct: 162 LFTGHEDGSVSRYDAITGEFVESKQVHNSG 191
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 165 (63.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 65/288 (22%), Positives = 130/288 (45%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
F +G L+ G D++I +W Y + + GH+ V +A D S I + ++DK++
Sbjct: 63 FHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTL 122
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNE-DSSVVISGSQDNTVMMWDVKSR--SH---HP 284
W++ TGQ RR++ H + V V+ + ++ SGS D T+ +WD + + +H P
Sbjct: 123 AFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESP 182
Query: 285 IQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQ 344
QV + + + + S N + + K + + ++G+ +S +
Sbjct: 183 FQVTAV--CFGDTGEQVIS-----GGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPE 235
Query: 345 HLMVLLDFLGST-QIGDVTPISIHNSCFQALKEARDSITSVHV-------SDHEILTASL 396
+L + + +T ++ DV P + C + + + + + SD +I + S
Sbjct: 236 GDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSD-KITSGSA 294
Query: 397 DCRIRRYDIRTGNLVTDYVGEP-IVDAC-FTRDCQCILTCSTDECLRL 442
D + +D+ T ++ G V+A F+ IL+ S+D+ L L
Sbjct: 295 DRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 164 (62.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 37/123 (30%), Positives = 60/123 (48%)
Query: 165 SG-LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI-A 222
SG +M F DGS+ TC +DK + W+ + + GH + VN + Q+
Sbjct: 98 SGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLC 157
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS- 281
SG+ D+++ +W+ E +VT V F + VISG DN V +WD++ ++
Sbjct: 158 SGSDDRTIKIWDARKKHAAHTL-ESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV 216
Query: 282 -HH 283
HH
Sbjct: 217 LHH 219
Score = 138 (53.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 30/111 (27%), Positives = 55/111 (49%)
Query: 175 DGSYCLTCGSDKKIKLWN--PYR--NLLLKTYGGHAHEVNDATAAC----DSSQIASGAS 226
+G + LT D +++W+ PY +K + GH H C S +I SG++
Sbjct: 235 EGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSA 294
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
D+ V +W+V T + + + H V V F+ +++SGS D T+ + ++
Sbjct: 295 DRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 37/114 (32%), Positives = 55/114 (48%)
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCG 478
+++A FT D I TCSTD+ L +D ATG+ +KGH G+F + Q+ C
Sbjct: 101 VMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGH--GNFVNSVQGSRRGQQLLCS 158
Query: 479 SSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLW 530
SD + K W TL S + V ++C T + ++S N VK+W
Sbjct: 159 GSDDRTIKIWDARKKHAAHTL-ESPFQ--VTAVCFGDTGEQVISGGIDNEVKIW 209
Score = 89 (36.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 41/171 (23%), Positives = 78/171 (45%)
Query: 376 EARDSITSVHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCI 431
E+ +T+V D ++++ +D ++ +DIR ++ G + I + + I
Sbjct: 180 ESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFI 239
Query: 432 LTCSTDECLRLFDK---ATGE-LLEEYKGHKSGDFR--IECCLDSKDSQIFCGSSDGKIY 485
LT + D LR++D A GE ++ ++GH+ + + C +I GS+D +Y
Sbjct: 240 LTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVY 299
Query: 486 KWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSACGNNVKLWTAEED 535
W V++ +I L G VN++ P I+S + L+ E D
Sbjct: 300 IWD-VNTRRI--LYKLPGHNGSVNAVDFSPKEPLILSGSSDKT-LYLGEID 346
Score = 81 (33.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 262
GH E+ A + + S D+ + +W+V + V H+ V F D S
Sbjct: 53 GHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSH 112
Query: 263 VISGSQDNTVMMWDV 277
+ + S D T+ WD+
Sbjct: 113 IFTCSTDKTLAFWDI 127
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 122 (48.0 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG---GHAHEVNDATAACDSSQIASGASDK 228
F DG Y + D I + N Y +T G GH + V A D + I S ++D
Sbjct: 45 FSSDGKYIASSSFDMTIMVHNVYNEC--ETIGVLRGHKNAVLQAKWLQDDNYICSASADH 102
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ LW+V +R ++ H + V + + ++ +S S DNT+ WD++S+
Sbjct: 103 KLFLWDVECESKLRSFKGHDNIVNGLDII-NHNLFVSCSDDNTLKFWDIRSK 153
Score = 97 (39.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 24/98 (24%), Positives = 52/98 (53%)
Query: 185 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRR 243
++K L++P +L+ ++ G + +N ++ D IAS + D ++++ V + +
Sbjct: 21 ERKTGLFSP--TMLINSHKGEVYSINFSS---DGKYIASSSFDMTIMVHNVYNECETIGV 75
Query: 244 WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
R H + V K+ +D + + S S D+ + +WDV+ S
Sbjct: 76 LRGHKNAVLQAKWLQDDNYICSASADHKLFLWDVECES 113
Score = 87 (35.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 34/152 (22%), Positives = 69/152 (45%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFD---- 444
+ T+ +D I++YD + L ++G I +D + + S DE + +D
Sbjct: 177 LFTSCVDNTIKKYDCKNYKLKDTFIGHKDYITGLDINKDETMLASISADESICFWDIQPF 236
Query: 445 KATGELLEEYKGHKSG-DFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV- 502
+LL + K D+ + + D+ + CGS D +Y + D Q L +S+
Sbjct: 237 SCEEKLLFQLNSPKYNIDYNLIKLSFNNDNLLACGSGDNYLY---IYDYKQ-KILKYSLP 292
Query: 503 GK-AVVNSLCSHPTRKHIMSACGNNVKLWTAE 533
G + +N + HP + I+++C ++ ++ E
Sbjct: 293 GHTSTINDVAFHPV-EDIVASCSSDHTIFLGE 323
Score = 82 (33.9 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 22/115 (19%), Positives = 53/115 (46%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 224
+ ++ ++ D +Y + +D K+ LW+ L+++ GH + VN + + S
Sbjct: 81 NAVLQAKWLQDDNYICSASADHKLFLWDVECESKLRSFKGHDNIVNGLDII-NHNLFVSC 139
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 279
+ D ++ W++ + V + H + V ++ + + DNT+ +D K+
Sbjct: 140 SDDNTLKFWDIRSKWAVHIIK-HDFPLLSVCSDKKGEFLFTSCVDNTIKKYDCKN 193
Score = 71 (30.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 30/156 (19%), Positives = 68/156 (43%)
Query: 376 EARDSITS-VHVSDHEI-LTASLDCRIRRYDIRTGNLVTDYVGE-PIVDACFTRDCQCIL 432
+ D+I + + + +H + ++ S D ++ +DIR+ V + P++ C + + +
Sbjct: 119 KGHDNIVNGLDIINHNLFVSCSDDNTLKFWDIRSKWAVHIIKHDFPLLSVCSDKKGEFLF 178
Query: 433 TCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS 492
T D ++ +D +L + + GHK D+ ++ ++ + S+D I W +
Sbjct: 179 TSCVDNTIKKYDCKNYKLKDTFIGHK--DYITGLDINKDETMLASISADESICFWDIQPF 236
Query: 493 SQISTLIHSVGKAVVN---SLCSHPTRKHIMSACGN 525
S L+ + N +L + ACG+
Sbjct: 237 SCEEKLLFQLNSPKYNIDYNLIKLSFNNDNLLACGS 272
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 33/122 (27%), Positives = 62/122 (50%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F + +Y T SD+ +++W ++ + GH + + D +AS S++
Sbjct: 411 FHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSIL 470
Query: 232 LWEVTTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
LW++ G+ ++R R H + + ++ +S+V++SG D TV +WDV +H P Q R
Sbjct: 471 LWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWDVMGPAHDPSQGRVA 530
Query: 291 NE 292
E
Sbjct: 531 GE 532
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
G Y ++ G DK +LW + + GH +V+ +S+ + +G+SD++V +W V
Sbjct: 373 GHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAV 432
Query: 236 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
TTG VR + H +T + + D + S ++++WD+
Sbjct: 433 TTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSILLWDL 474
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 33/105 (31%), Positives = 48/105 (45%)
Query: 173 PVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVIL 232
P + + L+ +D+ I+LW+ + Y GH V D SG DK+ L
Sbjct: 328 PTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARL 387
Query: 233 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
W + R + H V CV F+ +S+ V +GS D TV MW V
Sbjct: 388 WVTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAV 432
Score = 106 (42.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLV---TDYVGEPIVDACFTRDCQCILTCSTDECLR 441
H + + T S D +R + + TGN V T + G AC +RD + + + +
Sbjct: 412 HPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALAC-SRDGKTLASADDHGSIL 470
Query: 442 LFDKATGELLEEYKGH-KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
L+D G LL+ +GH K G + + ++S + + G +DG + W ++
Sbjct: 471 LWDLGPGRLLKRMRGHGKGGIWSLSWSVES--NVLVSGGADGTVRVWDVM 518
Score = 69 (29.3 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 211 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 270
+A A ++ + S ++D+++ LW + Q + ++ H V +++ +SG D
Sbjct: 324 NAVAPTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDK 383
Query: 271 TVMMW 275
T +W
Sbjct: 384 TARLW 388
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 115 (45.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 121 SKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCL 180
S+ R+H S R+ R ++ S R R + +R HTR+ GS
Sbjct: 97 SRSRSHSRSRSTSRSTDRRRSRSRRDSSSRS-RSRSRSRSESRSRSRSHTRYRSTGSSPT 155
Query: 181 TCGSDKKI-KLWNPY-RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
K ++ Y R L L+ GH+ + + + IAS ++D + +W+ TG
Sbjct: 156 PAAESKPPERVQVRYKRRLELR---GHSQPIAQVRISPNGRWIASASADGTARIWDAETG 212
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD-VKSRSHHPI 285
+ H + V+C+ ++ DS + +GS D + +WD + + H +
Sbjct: 213 AHIDTLVGHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAEPAHAV 260
Score = 102 (41.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 28/97 (28%), Positives = 44/97 (45%)
Query: 435 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 494
S DE + L+D G L+ H I+ C D + C S+DG I W
Sbjct: 325 SYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGT-LVVSC-STDGLIRIWDTATGQC 382
Query: 495 ISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLW 530
+ TL+H AV N +C P ++I++ + ++LW
Sbjct: 383 LRTLVHEDNPAVTN-VCFSPNGRYILAFNLDSCIRLW 418
Score = 102 (41.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 26/102 (25%), Positives = 44/102 (43%)
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATG 448
+ + S D + +D+R G L+ +P+ F RD +++CSTD +R++D ATG
Sbjct: 321 LASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRIWDTATG 380
Query: 449 ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
+ L H+ C I + D I W +
Sbjct: 381 QCLRTLV-HEDNPAVTNVCFSPNGRYILAFNLDSCIRLWDYI 421
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 167 (63.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 92/392 (23%), Positives = 161/392 (41%)
Query: 128 LLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFV------LSG----LMHTRFPVDGS 177
++ SL +T+ E K I +Y+P + R V L G ++ F G
Sbjct: 69 IVSSLGKTLESQAVETEKVLDI-IYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGK 127
Query: 178 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
Y + D ++ W+ T GH H V + + D ++ASG + ++LW+ +T
Sbjct: 128 YLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPST 187
Query: 238 GQPV-RRWREHASKVTCVKF-----NEDSSVVISGSQDNTVMMWDVKSR------SHHPI 285
G+ V R H+ +T + + N + V S S+D +V +WD + + H
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQ 247
Query: 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNG---LLSGVLMS 342
V CL S S +K + H +G+L C+ L G ++ + +S
Sbjct: 248 SVTCLRWGGDGLLYS-ASQDRTIKVWRAH--DGVL--------CRTLQGHGHWVNTMALS 296
Query: 343 TQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKE-ARDSITSVHVSDHE-ILTASLDCRI 400
T + + F + V P + S Q LKE A V E +++ S D +
Sbjct: 297 TDYALRTGAFEPAE--ASVNPQDLQGS-LQELKERALSRYNLVRGQGPERLVSGSDDFTL 353
Query: 401 RRYD-IRTGNLVTDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 457
+ +T G I F+ D + + + S D+ ++L+D TG+ L +GH
Sbjct: 354 FLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGH 413
Query: 458 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
+ ++I DS+ + GSSD + W +
Sbjct: 414 VAAVYQIAWSADSR--LLVSGSSDSTLKVWDV 443
Score = 159 (61.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 36/103 (34%), Positives = 59/103 (57%)
Query: 180 LTCGSDK-KIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 237
L GSD + LW+P + L GH +N + DS +AS + DKS+ LW+ T
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
G+ + R H + V + ++ DS +++SGS D+T+ +WDVK++
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/104 (28%), Positives = 47/104 (45%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
F D + DK IKLW+ L + GH V + DS + SG+SD ++
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 275
+W+V + HA +V V ++ D V SG +D + +W
Sbjct: 440 VWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 156 (60.0 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 39/150 (26%), Positives = 66/150 (44%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
F G +C +D IKLW+ ++ +KT GH H V+ + S + D+++
Sbjct: 158 FDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTI 217
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HHP 284
+WEV TG V+ + H V V+ + + S+ + S D T+ +W S+ H
Sbjct: 218 KMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHE 277
Query: 285 IQVRCLNEALKEARDSITSVHSLVKSTKNH 314
V C+ A + A +I + K H
Sbjct: 278 HTVECIAWAPEAAASAINEAAG-ADNKKGH 306
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 180 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 238
L GS DK I++W+ L L T GH + V + S + DK++ +W++
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 278
+ ++ H T + F++ VISGS D TV +W+ +
Sbjct: 372 RCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 112 (44.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 180 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG- 238
++ D I++W+ ++ GH V D +AS ++D S+ LW+
Sbjct: 124 VSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSY 183
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+ ++ H V+ V F V+S S+D T+ MW+V
Sbjct: 184 ECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Score = 53 (23.7 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 22/98 (22%), Positives = 40/98 (40%)
Query: 435 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSS 493
S D+ +R++D + G L GH D + + +SD K + W L +
Sbjct: 316 SRDKTIRIWDVSVGLCLLTLSGH---DNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKR 372
Query: 494 QISTLIHSVGKAVVNSLCSHPTRKHIMS-ACGNNVKLW 530
+ TL + S+ H +++S + VK+W
Sbjct: 373 CMKTLY--AHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 147 (56.8 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 224
+G+ R+ G L D + +WN + L + GH V D I +G
Sbjct: 156 AGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTG 215
Query: 225 ASDKSVILWEVTTGQP---VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD----- 276
+ D S+I+W T + V+ H +TC+ N +SS+ ISGS+D +V + +
Sbjct: 216 SDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGK 275
Query: 277 -VKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGL 335
V S + H V C+ + A + + + K L L F C++ G+
Sbjct: 276 VVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKK----LIIWDLQHSTPRFICEHEEGV 331
Query: 336 LSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHE--ILT 393
S + T + G+ I D S+ +C +D++ ++ VS + I++
Sbjct: 332 TSLTWIGTSKYLATGCANGTVSIWD----SLLGNCVHTYHGHQDAVQAISVSTNTDFIVS 387
Query: 394 ASLDCRIRRYD 404
S+D R ++
Sbjct: 388 VSVDNTARVFE 398
Score = 112 (44.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 201 TYGGHAHEVND-ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 259
T+ GH E+ A + D++ +A+G D LW++ G H V+C+ F+ D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 260 SSVVISGSQDNTVMMWDVKS 279
++ SG D V ++D S
Sbjct: 125 GQLLASGGLDGVVQIFDASS 144
Score = 100 (40.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 385 HVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDAC--FTRDCQCILTCSTDECLRL 442
H H +L S DC + ++ + + G + C FT D + I T S D L +
Sbjct: 164 HPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIV 223
Query: 443 FDKATGELLEEYKGHKSGDFRIECC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 498
++ T E + KGH + C ++S S GS DG ++ +V +S+L
Sbjct: 224 WNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSL 280
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 144 (55.7 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 158 NRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 217
+R+L+V + F DG Y +T D++IKLW+ + + GH ++ + +
Sbjct: 358 SRDLYVRT----IAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHN 413
Query: 218 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
I SG+ D++ LW+V TGQ + + E + VT + + + + GS D + +W V
Sbjct: 414 GRFIVSGSGDRTARLWDVETGQCILKL-EIENGVTAIAISPNDQFIAVGSLDQIIRVWSV 472
Score = 71 (30.1 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 33/145 (22%), Positives = 61/145 (42%)
Query: 365 SIHNSCFQALKEARDSITSVHVS-DHEIL-TASLDCRIRRYDIRTGNLV----------- 411
S+ + + L+ ++S+ S+ S D IL + SLD I+ ++++ V
Sbjct: 471 SVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGIC 530
Query: 412 -TDYVGEP--IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCL 468
Y G ++ + D + L+ S D ++ +D TG+ +GHK+ I C
Sbjct: 531 KATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSV--ISVCF 588
Query: 469 DSKDSQIFCGSSDGKIYKWQLVDSS 493
Q GS D + W + +S
Sbjct: 589 SPDGRQFASGSGDLRARIWSIDPAS 613
WARNING: HSPs involving 702 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 540 540 0.00094 119 3 11 22 0.36 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 952
No. of states in DFA: 627 (67 KB)
Total size of DFA: 357 KB (2175 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.27u 0.10s 46.37t Elapsed: 00:00:38
Total cpu time: 46.38u 0.10s 46.48t Elapsed: 00:00:38
Start: Thu Aug 15 11:27:22 2013 End: Thu Aug 15 11:28:00 2013
WARNINGS ISSUED: 2