RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18231
(540 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 95.6 bits (236), Expect = 3e-22
Identities = 50/320 (15%), Positives = 101/320 (31%), Gaps = 23/320 (7%)
Query: 189 KLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHA 248
K W P R GH V S + S + D ++ +W+ TG R + H
Sbjct: 1 KEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 249 SKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL------------NEALKE 296
V + F+ ++ S S D T+ +WD + + +
Sbjct: 60 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSA 119
Query: 297 ARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSG------VLMSTQHLMVLL 350
+RD + + G + + + S +
Sbjct: 120 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 179
Query: 351 DFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNL 410
+ + + + +S + +L+ S D I+ +D+ TG
Sbjct: 180 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 239
Query: 411 VTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCL 468
+ VG + F + IL+C+ D+ LR++D ++ H+ ++
Sbjct: 240 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 299
Query: 469 DSKDSQIFCGSSDGKIYKWQ 488
+ + GS D + W+
Sbjct: 300 TAP--YVVTGSVDQTVKVWE 317
Score = 87.5 bits (215), Expect = 1e-19
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 224
+G + G + L+ DK IK+W+ + L T GH + V I S
Sbjct: 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 265
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
A DK++ +W+ + ++ H VT + F++ + V++GS D TV +W+
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 67.8 bits (164), Expect = 5e-13
Identities = 39/224 (17%), Positives = 82/224 (36%), Gaps = 25/224 (11%)
Query: 82 HDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRILY 141
H D V+ + + + +G+ C H + +
Sbjct: 58 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIV 117
Query: 142 ELPKEWSIRVYRPLTVNRELFVLSG----LMHTRFPVDGSYCLTCGSDKKIKLWNPYRNL 197
++ +I+++ T + +G + R DG+ +C +D+ +++W
Sbjct: 118 SASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 176
Query: 198 LLKTYGGHAHEVNDATAACDSSQIA--------------------SGASDKSVILWEVTT 237
H H V + A +SS + SG+ DK++ +W+V+T
Sbjct: 177 CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 236
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
G + H + V V F+ ++S + D T+ +WD K++
Sbjct: 237 GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 280
Score = 36.6 bits (83), Expect = 0.006
Identities = 26/157 (16%), Positives = 44/157 (28%), Gaps = 4/157 (2%)
Query: 372 QALKEARDSITSVHVSDHE--ILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQ 429
AL R +T V +++AS D I+ +D TG+ G + D
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 70
Query: 430 CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
L S + + H + I S D I W++
Sbjct: 71 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 490 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN 526
+ T + V + + I S +
Sbjct: 131 QTGYCVKTFTGH--REWVRMVRPNQDGTLIASCSNDQ 165
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 85.3 bits (209), Expect = 1e-18
Identities = 57/349 (16%), Positives = 109/349 (31%), Gaps = 22/349 (6%)
Query: 191 WNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK 250
W K GH V ++I SG+ D ++ +W TG+ +R H
Sbjct: 1 WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 251 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310
V + DN ++ S L +
Sbjct: 60 VWSSQMR-----------DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 108
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISI-HNS 369
S ++ + L+ L+ V + V +
Sbjct: 109 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET 168
Query: 370 CFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQ 429
C L+ + + S+ +++ SLD IR +D+ TGN + G + +
Sbjct: 169 CLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN 228
Query: 430 CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
+++ + D ++++D TG+ L+ +G + C +K+ I S DG + W L
Sbjct: 229 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDL 287
Query: 490 VDSSQISTLIHSVGK---AVVNSLCSHPTRKHIMSACGNN-----VKLW 530
I L+ VV + + T+ N + +
Sbjct: 288 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 63.3 bits (152), Expect = 2e-11
Identities = 45/329 (13%), Positives = 103/329 (31%), Gaps = 24/329 (7%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
G+ ++ D +K+W+ L+T GH V + +
Sbjct: 23 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW----SSQMRDNIIISGSTDRT 78
Query: 232 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLN 291
L + T + V+SGS+D T+ +WD+++ + +
Sbjct: 79 LKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH-- 136
Query: 292 EALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD 351
+ + + K+ L+ L +
Sbjct: 137 -------VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH 189
Query: 352 FLGSTQIGDVTPISI-HNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNL 410
+ + + + +C L + + + + D+ +++ + D ++ +DI+TG
Sbjct: 190 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQC 249
Query: 411 VTDYVGEPIVDACFTRDCQC---ILTCSTDECLRLFDKATGELLEEYKGHKSGDFR--IE 465
+ G + T ++T S D ++L+D TGE + +SG +
Sbjct: 250 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 309
Query: 466 CCLDSKDSQIFC-----GSSDGKIYKWQL 489
S + G+ + K+
Sbjct: 310 RIRASNTKLVCAVGSRNGTEETKLLVLDF 338
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 85.2 bits (209), Expect = 2e-18
Identities = 55/355 (15%), Positives = 119/355 (33%), Gaps = 46/355 (12%)
Query: 180 LTCGSDKKIKLWNP----YRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
L ++ L+NP ++ L H V + D +A+G +K+ ++ V
Sbjct: 32 LKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG-CNKTTQVYRV 90
Query: 236 TTGQPVRRWRE------------------HASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
+ G V R + + V F+ D + +G++D + +WD+
Sbjct: 91 SDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDI 150
Query: 278 KSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLS 337
++R I + + L T
Sbjct: 151 ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTV 210
Query: 338 GVLMSTQHLMVLLDFLGSTQIGDV---TPISIHNSCFQALKEARDSITSVHVS--DHEIL 392
V + + ++ D + +S ++ +DS+ SV + ++
Sbjct: 211 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 270
Query: 393 TASLDCRIRRYDIRTGNLVTDYVG--------------EPIVDACFTRDCQCILTCSTDE 438
+ SLD ++ ++++ N +D + ++ T++ + IL+ S D
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330
Query: 439 CLRLFDKATGELLEEYKGHKSG----DFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
+ +DK +G L +GH++ L + + GS D K W+
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 73.7 bits (179), Expect = 1e-14
Identities = 60/356 (16%), Positives = 107/356 (30%), Gaps = 49/356 (13%)
Query: 221 IASGASDKSVILWEVTTGQPVR----RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
++ IL+ + + + +H S V CVKF+ D + +G + T ++
Sbjct: 31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYR 89
Query: 277 VKSRS-------HHPIQVRCLNEALKEARDSITSVHSLVKSTKNHL---------SNGLL 320
V S N + S + S+ S
Sbjct: 90 VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWD 149
Query: 321 TKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDS 380
+ + L L+ G + + S ++++ +
Sbjct: 150 IENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTT 209
Query: 381 ITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGE---------PIVDACFTRDCQCI 431
+ I SLD +R +D TG LV E + FTRD Q +
Sbjct: 210 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV 269
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKS----------GDFRIECCLDSKDSQIFCGSSD 481
++ S D ++L++ + K S DF + D I GS D
Sbjct: 270 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 329
Query: 482 GKIYKWQLVDSSQISTL------IHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 530
+ W + + L + SV AV N P + G+ ++W
Sbjct: 330 RGVLFWDKKSGNPLLMLQGHRNSVISV--AVANGSSLGPEYNVFATGSGDCKARIW 383
Score = 69.4 bits (168), Expect = 3e-13
Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 18/126 (14%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWN------------PYRNLLLKTYGGHAHEVNDATAACDS 218
F DG ++ D+ +KLWN P TY GH V +
Sbjct: 261 VFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND 320
Query: 219 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV------KFNEDSSVVISGSQDNTV 272
I SG+ D+ V+ W+ +G P+ + H + V V + +V +GS D
Sbjct: 321 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA 380
Query: 273 MMWDVK 278
+W K
Sbjct: 381 RIWKYK 386
Score = 53.3 bits (126), Expect = 3e-08
Identities = 51/284 (17%), Positives = 96/284 (33%), Gaps = 37/284 (13%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
F DG + T D+ I++W+ ++ GH ++ ++ SG+ D++V
Sbjct: 128 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTV 187
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+W++ TGQ T D + +GS D V +WD ++ L
Sbjct: 188 RIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV----ERL 243
Query: 291 NEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLL 350
+ + SV+S+V + V+ + V L
Sbjct: 244 DSENESGTGHKDSVYSVVFTRDGQS-----------------------VVSGSLDRSVKL 280
Query: 351 DFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVS--DHEILTASLDCRIRRYDIRTG 408
L + + +C +D + SV + D IL+ S D + +D ++G
Sbjct: 281 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 340
Query: 409 NLVTDYVGE--------PIVDACFTRDCQCILTCSTDECLRLFD 444
N + G + + T S D R++
Sbjct: 341 NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 27.5 bits (59), Expect = 4.6
Identities = 7/50 (14%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Query: 147 WSIRVYRPLTV----NRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWN 192
W + PL + + ++ + + + T D K ++W
Sbjct: 335 WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 26.7 bits (57), Expect = 7.7
Identities = 6/59 (10%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 478 GSSDGKIYKWQLVDSSQIS-TLIHSVG-KAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 534
++ + +I L S+ +VV + +++ + C +++ +
Sbjct: 34 KQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSD 92
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 82.5 bits (202), Expect = 8e-18
Identities = 50/297 (16%), Positives = 91/297 (30%), Gaps = 11/297 (3%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
+T GH ++ DS + S + D +I+W+ T V +S V +
Sbjct: 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 258 EDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317
+ V G DN ++++K+R + R + T + +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRE-LAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 318 GLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEA 377
L + + G V+ + L G+ C Q
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 378 RDSITSVHVS--DHEILTASLDCRIR----RYDIRTGNLVTDYVGEPIVDACFTRDCQCI 431
I ++ + T S D R R D D + I F++ + +
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285
Query: 432 LTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKW 487
L D ++D + GH + R+ C + D + GS D + W
Sbjct: 286 LAGYDDFNCNVWDALKADRAGVLAGHDN---RVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 79.8 bits (195), Expect = 6e-17
Identities = 49/300 (16%), Positives = 91/300 (30%), Gaps = 14/300 (4%)
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEAR 298
+ R R H +K+ + + DS +++S SQD +++WD + + V +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNK----VHAIPLRSSWVM 101
Query: 299 DSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQI 358
+ + + + L ++ L+G L D T
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSS 161
Query: 359 GDVTPISIHNSCFQALKEARDSITSVHVSDHEI-----LTASLDCRIRRYDIRTGNLVTD 413
GD T Q V ++ + D + +D+R G
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Query: 414 YVG--EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSK 471
+ G I CF + T S D RLFD + L Y
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281
Query: 472 DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 530
+ G D W + + + L + V+ L + + ++ +K+W
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR--VSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 75.2 bits (183), Expect = 2e-15
Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE--VNDATAACDSSQIASGASDKS 229
F +G+ T D +L++ + L TY + + + + +G D +
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293
Query: 230 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
+W+ H ++V+C+ +D V +GS D+ + +W+
Sbjct: 294 CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 65.5 bits (158), Expect = 4e-12
Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 8/131 (6%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
M D ++ D KLW+ + +T+ GH ++N + + A+G+ D
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247
Query: 228 KSVIL--WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR----- 280
+ L +T V F++ ++++G D +WD
Sbjct: 248 ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV 307
Query: 281 -SHHPIQVRCL 290
+ H +V CL
Sbjct: 308 LAGHDNRVSCL 318
Score = 55.1 bits (131), Expect = 7e-09
Identities = 28/122 (22%), Positives = 50/122 (40%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
+ +D + +T D LW+ T+ GH +V + A D+ SGA D
Sbjct: 146 LSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD 205
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQV 287
S LW+V G + + H S + + F + + +GS D T ++D+++
Sbjct: 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
Query: 288 RC 289
Sbjct: 266 HD 267
Score = 50.1 bits (118), Expect = 3e-07
Identities = 32/279 (11%), Positives = 82/279 (29%), Gaps = 5/279 (1%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
+ D ++ D K+ +W+ Y + + V A + +A G D
Sbjct: 62 HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121
Query: 231 ILWEVTTGQPVRRWREHAS---KVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQV 287
++ + T + R + D + +++ S D T +WD+++
Sbjct: 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT 181
Query: 288 RCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLM 347
+ + + T + + + + + + + + +
Sbjct: 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 348 VLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRT 407
+ ++ D+ + + S S +L D +D
Sbjct: 242 ATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301
Query: 408 GNLVTDYVG--EPIVDACFTRDCQCILTCSTDECLRLFD 444
+ G + T D + T S D L++++
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 72.2 bits (175), Expect = 1e-14
Identities = 30/283 (10%), Positives = 75/283 (26%), Gaps = 14/283 (4%)
Query: 217 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 276
+I + SV V + + EH+ + T K + SG V +WD
Sbjct: 28 AGDKIQY-CNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWD 86
Query: 277 VKSRSHHPIQVRCLNEALKEARDS---ITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLN 333
+H + + + ++ + + L
Sbjct: 87 TTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA 146
Query: 334 GLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILT 393
++ V ++ + + +
Sbjct: 147 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 206
Query: 394 ASLDCRIRRYDIRTGNL---------VTDYVGEPIVDACFTRDCQCILTCSTDECLRLFD 444
D I Y+ G + ++ D I + S D+ +++++
Sbjct: 207 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 266
Query: 445 KATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
AT ++ + + + + +K + + S++G I
Sbjct: 267 VATLKVEKTIPVGTRIEDQQLGIIWTKQA-LVSISANGFINFV 308
Score = 50.3 bits (118), Expect = 3e-07
Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 1/110 (0%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
+ F G + H+ V T + D ++IAS ++D
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259
Query: 228 KSVILWEVTTGQPVRRWREHAS-KVTCVKFNEDSSVVISGSQDNTVMMWD 276
K++ +W V T + + + + ++S S + + +
Sbjct: 260 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 49.9 bits (117), Expect = 3e-07
Identities = 32/283 (11%), Positives = 75/283 (26%), Gaps = 14/283 (4%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
G C + + + Y H+H+ A + ASG +V +W+
Sbjct: 28 AGDKIQYC-NGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWD 86
Query: 235 VTTGQPV--RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNE 292
T + + V + ++ +S + + + +
Sbjct: 87 TTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA 146
Query: 293 ALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF 352
+ D S + S + + + F F+ + + L
Sbjct: 147 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 206
Query: 353 LGSTQI--------GDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYD 404
G G T + +S + +I +AS D I+ ++
Sbjct: 207 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 266
Query: 405 IRTGNLVTDYVGE---PIVDACFTRDCQCILTCSTDECLRLFD 444
+ T + Q +++ S + + +
Sbjct: 267 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 32.6 bits (72), Expect = 0.12
Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 7/117 (5%)
Query: 423 CFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK-----SGDFRIECCLDSKDSQIFC 477
+ D + D + L++ G ++ ++I
Sbjct: 196 RYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS 255
Query: 478 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAE 533
S+D I W + T+ + L T++ ++S N + E
Sbjct: 256 ASADKTIKIWNVATLKVEKTIPVG-TRIEDQQLGIIWTKQALVSISANGFINFVNPE 311
Score = 29.5 bits (64), Expect = 0.95
Identities = 14/107 (13%), Positives = 24/107 (22%), Gaps = 3/107 (2%)
Query: 424 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGK 483
T I C+ + + E Y H + G G
Sbjct: 25 NTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGY--YCASGDVHGN 81
Query: 484 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+ W ++ I V V + K I + +
Sbjct: 82 VRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 128
Score = 26.4 bits (56), Expect = 8.8
Identities = 3/26 (11%), Positives = 7/26 (26%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNP 193
++ ++ I NP
Sbjct: 285 QQLGIIWTKQALVSISANGFINFVNP 310
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 72.5 bits (176), Expect = 2e-14
Identities = 33/321 (10%), Positives = 79/321 (24%), Gaps = 9/321 (2%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
DG + R+ H V T + + + +G V +W+
Sbjct: 20 DGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTG-GKGCVKVWD 78
Query: 235 VTTGQPVR-----RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRC 289
++ + + K D +I G + +T+ +WD+ + +
Sbjct: 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT 138
Query: 290 LNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVL 349
+ A + R + + + + L
Sbjct: 139 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKL 198
Query: 350 LDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGN 409
+ S+ + + + +
Sbjct: 199 WTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258
Query: 410 LVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLD 469
++ F + ++ D L + G + + K S + C +
Sbjct: 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS---VLSCDIS 315
Query: 470 SKDSQIFCGSSDGKIYKWQLV 490
D I GS D K ++++
Sbjct: 316 VDDKYIVTGSGDKKATVYEVI 336
Score = 54.8 bits (130), Expect = 9e-09
Identities = 32/326 (9%), Positives = 74/326 (22%), Gaps = 15/326 (4%)
Query: 212 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT 271
A Q D + + + H V V + + V +G
Sbjct: 16 HVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGC 73
Query: 272 VMMWDVKSRSHHPIQVRCLNEALKEARDSITSV------HSLVKSTKNHLSNGLLTKLVF 325
V +WD+ SH + + I S +L+ + +
Sbjct: 74 VKVWDI---SHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT 130
Query: 326 AFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVH 385
L + F + + + + + D + +
Sbjct: 131 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 190
Query: 386 VSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDK 445
+S+ + + C + +
Sbjct: 191 ISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV 250
Query: 446 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 505
++Y+ H + D + W+ + I S +
Sbjct: 251 LHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES---S 307
Query: 506 VVNSLCSHPTRKHIMSACGNN-VKLW 530
V S K+I++ G+ ++
Sbjct: 308 SVLSCDISVDDKYIVTGSGDKKATVY 333
Score = 54.0 bits (128), Expect = 2e-08
Identities = 22/280 (7%), Positives = 67/280 (23%), Gaps = 9/280 (3%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGA 225
+ T G +K+W+ + + + D + G
Sbjct: 58 TISNPTRHVYT-GGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG 116
Query: 226 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 285
++ +W++ P + +S C + S + + + +
Sbjct: 117 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 176
Query: 286 QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQH 345
+ + D L ++ + + + +
Sbjct: 177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTG 236
Query: 346 LMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDI 405
+ + S E+ ++ D + +
Sbjct: 237 EWLAVGMESSNVEVLHVNKPDKYQLHL--HESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294
Query: 406 RTGNLVTDYVGE-PIVDACFTRDCQCILTCSTDECLRLFD 444
G + ++ + D + I+T S D+ +++
Sbjct: 295 PYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 51.3 bits (121), Expect = 1e-07
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
+ +F G + ++ G D + W + + V + D I +G+ D
Sbjct: 269 LSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGD 327
Query: 228 KSVILWEV 235
K ++EV
Sbjct: 328 KKATVYEV 335
Score = 36.7 bits (83), Expect = 0.006
Identities = 23/229 (10%), Positives = 46/229 (20%), Gaps = 16/229 (6%)
Query: 74 VVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLP 133
V Q N D+++R+ +G L G +
Sbjct: 88 VSQLDCLNRDNYIRS---CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPAC 144
Query: 134 RTITRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCG-------SDK 186
+ + L ++
Sbjct: 145 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204
Query: 187 KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWRE 246
R ++ C + + + + S + +
Sbjct: 205 NTVRSWDLREGRQLQQHDFTSQIFSL-GYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL 263
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-----RSHHPIQVRCL 290
H S V +KF +S +DN + W +S V
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSC 312
Score = 31.3 bits (69), Expect = 0.31
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 472 DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWT 531
Q D I + QI+TL H VV ++ +H+ + VK+W
Sbjct: 22 QMQPVPFPPDALIGPGIPRHARQINTLNHG---EVVCAVTISNPTRHVYTGGKGCVKVWD 78
Query: 532 AEEDYGQ 538
+
Sbjct: 79 ISHPGNK 85
Score = 27.1 bits (58), Expect = 5.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 165 SGLMHTRFPVDGSYCLTCGSDKKIKLWN 192
S ++ VD Y +T DKK ++
Sbjct: 307 SSVLSCDISVDDKYIVTGSGDKKATVYE 334
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 68.7 bits (166), Expect = 2e-13
Identities = 44/295 (14%), Positives = 91/295 (30%), Gaps = 13/295 (4%)
Query: 199 LKTYGGHAHEVNDATA-ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
L+ + D +I SG D ++ +W+ T + R H V C++++
Sbjct: 5 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64
Query: 258 EDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317
E + S V + + I L+ + + + +
Sbjct: 65 ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK---DRSIAVWD 121
Query: 318 GLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEA 377
+ R + V+ +V + ++ + + + L
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTS----TCEFVRTLNGH 177
Query: 378 RDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTD 437
+ I + D +++ S D IR +DI G + G + C D + I++ + D
Sbjct: 178 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYD 237
Query: 438 ECLRLFDKATGELLEEYKGHK-----SGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
++++D G L + QI S D I W
Sbjct: 238 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 292
Score = 65.3 bits (157), Expect = 3e-12
Identities = 57/300 (19%), Positives = 105/300 (35%), Gaps = 21/300 (7%)
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEAR 298
Q + E + V C+++ D ++SG +DNT+ +WD + R L
Sbjct: 6 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE----CKRILTGHTGSVL 59
Query: 299 DSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQI 358
++ + + + L +MV S +
Sbjct: 60 CLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV 119
Query: 359 GDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEP 418
D+ + L R ++ V D I++AS D I+ ++ T V G
Sbjct: 120 WDMASPTDITLRRV-LVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK 178
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCG 478
AC + +++ S+D +RL+D G L +GH + C+ + +I G
Sbjct: 179 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH----EELVRCIRFDNKRIVSG 234
Query: 479 SSDGKIYKWQLVDSSQISTLIHSVGKAV-------VNSLCSHPTRKHIMSACG-NNVKLW 530
+ DGKI W LV + ++ V L I+S+ + + +W
Sbjct: 235 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE--FQIVSSSHDDTILIW 292
Score = 44.5 bits (103), Expect = 2e-05
Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 42/238 (17%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNP-YRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
+ +TC D+ I +W+ + H D I S +
Sbjct: 97 AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG 156
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 286
D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++ + +
Sbjct: 157 DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVL 214
Query: 287 VRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHL 346
+ ++SG +
Sbjct: 215 EGHEE--------------------------------LVRCIRFDNKRIVSGAYDGKIKV 242
Query: 347 MVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYD 404
C + L E + + + +I+++S D I +D
Sbjct: 243 W-------DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293
Score = 41.4 bits (95), Expect = 2e-04
Identities = 28/279 (10%), Positives = 86/279 (30%), Gaps = 18/279 (6%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 234
D ++ D IK+W+ + GH V + +
Sbjct: 24 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL----CLQYDERVIITGSSDSTVRV 79
Query: 235 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEAL 294
+ ++ ++++ S+D ++ +WD+ S + ++ +
Sbjct: 80 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 139
Query: 295 KEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLG 354
+ + S + + F ++ + + ++
Sbjct: 140 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVS-GSSDN 198
Query: 355 STQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDY 414
+ ++ D+ +C + L+ + + + + I++ + D +I+ +D+
Sbjct: 199 TIRLWDIE----CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAP 254
Query: 415 VGEPIVDA---------CFTRDCQCILTCSTDECLRLFD 444
G + D I++ S D+ + ++D
Sbjct: 255 AGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293
>d1vhna_ c.1.4.1 (A:) Putative flavin oxidoreducatase TM0096
{Thermotoga maritima [TaxId: 2336]}
Length = 305
Score = 68.5 bits (166), Expect = 3e-13
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 31 FRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDTPLVVQFASNNHDDFVRATQ 90
FR L D F+ M+ A F+ +S+ + E P + + VQ + ++ A +
Sbjct: 16 FRTLAFEWGADFAFSEMVSAKGFLMNSQ-KTEELLPQPHERNVAVQIFGSEPNELSEAAR 74
Query: 91 YVAPHCNGVDLNCGCPQRWAIKEGYGC 117
++ +DLN GCP R +KEG G
Sbjct: 75 ILSEKYKWIDLNAGCPVRKVVKEGAGG 101
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 66.5 bits (160), Expect = 1e-12
Identities = 39/298 (13%), Positives = 87/298 (29%), Gaps = 25/298 (8%)
Query: 217 DSSQIASGASDKSVILW---EVTTGQPVRRWREHASK-VTCVKF--NEDSSVVISGSQDN 270
++ IA + + + PV ++ H S VT VKF + S + SG +
Sbjct: 28 TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESG 87
Query: 271 TVMMWDVKSRSHHPIQVRCLNEALKEARDSITSV------------------HSLVKSTK 312
V++W + + I+ + + S
Sbjct: 88 KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD 147
Query: 313 NHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQ 372
+ S G ++ +L M+ ++ + G + + H
Sbjct: 148 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF 207
Query: 373 ALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCIL 432
+ V + + + + A D Q
Sbjct: 208 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFA 267
Query: 433 TCSTDECLRLFDKATGELLEEYKGHKSGDFRIE-CCLDSKDSQIFCGSSDGKIYKWQL 489
T D +R++D T + ++++ K + + + + +I S DG + ++L
Sbjct: 268 TVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 51.8 bits (122), Expect = 7e-08
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 216 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN---EDSSVVISGSQDNTV 272
DS + A+ +D ++ +W+VTT + V++W ++ + + +IS S D T+
Sbjct: 261 LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 320
Query: 273 MMWDV 277
+++
Sbjct: 321 NFYEL 325
Score = 51.1 bits (120), Expect = 1e-07
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC---DSSQIASG 224
+ +D T G+D I++W+ + ++ + ++ + + +I S
Sbjct: 255 IFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL 314
Query: 225 ASDKSVILWEV 235
+ D ++ +E+
Sbjct: 315 SLDGTLNFYEL 325
Score = 49.9 bits (117), Expect = 4e-07
Identities = 28/297 (9%), Positives = 75/297 (25%), Gaps = 27/297 (9%)
Query: 175 DGSYCLTCGSD----KKIKLWNPYRNLLLKTYGGHAHEVNDAT--AACDSSQIASGASDK 228
+ + + + +++ G + V S + SG
Sbjct: 28 TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESG 87
Query: 229 SVILWEVTTGQPVRR--------WREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVK 278
VI+W T + ++ A ++ + ++ + V+ +DN +
Sbjct: 88 KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD 147
Query: 279 SRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGL--- 335
S + + S+ + F+ + +
Sbjct: 148 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF 207
Query: 336 ---LSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEIL 392
+ S + ++ + + + + + +
Sbjct: 208 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFA 267
Query: 393 TASLDCRIRRYDIRTGNLVTDYVGEP-----IVDACFTRDCQCILTCSTDECLRLFD 444
T D IR +D+ T V + + I++ S D L ++
Sbjct: 268 TVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 65.0 bits (156), Expect = 3e-12
Identities = 29/294 (9%), Positives = 74/294 (25%), Gaps = 2/294 (0%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWRE-HASKVTCVKF 256
+ + GH + +++ D + S ++ + W+++TG R + + HA+ +T +K
Sbjct: 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 63
Query: 257 NEDSSVVISGSQDNTVMMWDVKSR-SHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHL 315
+ D+ ++ S L+ S ++ K+
Sbjct: 64 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 123
Query: 316 SNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALK 375
LS G +
Sbjct: 124 IYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEIT 183
Query: 376 EARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCS 435
S + + + + + + ++ D + T S
Sbjct: 184 SVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGS 243
Query: 436 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
D + +++ + + ++ I D I W +
Sbjct: 244 LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 54.2 bits (128), Expect = 1e-08
Identities = 35/301 (11%), Positives = 76/301 (25%), Gaps = 15/301 (4%)
Query: 238 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEA 297
G + H +T + + D + S + + WD+ +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG-------ISNRVFPDVH 54
Query: 298 RDSITSV------HSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLD 351
IT + S +HL N L S L +
Sbjct: 55 ATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIA 114
Query: 352 FLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLV 411
+ + + + ++++ S + +
Sbjct: 115 VAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVK 174
Query: 412 TDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSK 471
T I F+ + ++ + + A L ++ C S
Sbjct: 175 TIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP 234
Query: 472 -DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKL 529
+ ++ GS D + W + S +I + I+SA ++ +K
Sbjct: 235 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKF 294
Query: 530 W 530
W
Sbjct: 295 W 295
Score = 47.7 bits (111), Expect = 2e-06
Identities = 18/283 (6%), Positives = 67/283 (23%), Gaps = 14/283 (4%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 230
DG + ++ I W+ + + + + + + + D +
Sbjct: 19 SSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHL 78
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCL 290
+ ++ + +S D V + ++ +
Sbjct: 79 KVVPAGGSGVDSSKAVA-----NKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV 133
Query: 291 NEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLL 350
+ + ++++ V + + + +
Sbjct: 134 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAF 193
Query: 351 DFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDH-----EILTASLDCRIRRYDI 405
+ +N V + T SLD + +++
Sbjct: 194 LVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 253
Query: 406 RTGNLVTDYVGEP----IVDACFTRDCQCILTCSTDECLRLFD 444
+ + V++ + I++ D ++ ++
Sbjct: 254 NKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 40.0 bits (91), Expect = 5e-04
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNP--YRNLLLKTYGGHAHEVNDATAACDSSQIASGA 225
+ D T D + +WN + + G HA ++ + + I S
Sbjct: 228 ACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAG 287
Query: 226 SDKSVILWEVT 236
D ++ W V
Sbjct: 288 QDSNIKFWNVP 298
Score = 28.0 bits (60), Expect = 2.7
Identities = 7/46 (15%), Positives = 19/46 (41%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWN 192
W++ + + +++ ++ + ++ G D IK WN
Sbjct: 251 WNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 63.7 bits (153), Expect = 2e-11
Identities = 28/340 (8%), Positives = 80/340 (23%), Gaps = 26/340 (7%)
Query: 174 VDGSYCLTCGSDKKIKLWNPYR----NLLLKTYGGHAHEV---------NDATAACDSSQ 220
S+ ++C D +K+W+ N K+Y H+ A +
Sbjct: 22 ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 81
Query: 221 IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS--SVVISGSQDNTVMMWDVK 278
+A+ + ++ + +T ++ + + S ++ S D + V
Sbjct: 82 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVA 141
Query: 279 SRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSG 338
+ + + E+ + ++ S ++ + + +G
Sbjct: 142 TDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATG 201
Query: 339 ----------VLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSD 388
+ + + +
Sbjct: 202 FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 261
Query: 389 HEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATG 448
+ +L ++ F + + + D LR +D T
Sbjct: 262 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 321
Query: 449 ELLEEYKGHKSG-DFRIECCLDSKDSQIFCGSSDGKIYKW 487
E + H + + + +
Sbjct: 322 ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361
Score = 62.6 bits (150), Expect = 4e-11
Identities = 36/367 (9%), Positives = 90/367 (24%), Gaps = 57/367 (15%)
Query: 204 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP------VRRWREHASKVTCVKF- 256
H ++ + +S S + D + +W+ H S + V
Sbjct: 12 AHDADIFSV--SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 257 ------NEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKS 310
+ +V + S ++ + + ++ + +
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITR---------------EDETKKVIFEKLDLLD 114
Query: 311 TKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDF--LGSTQIGDVTPISIHN 368
+ + K + + L++ + T ++ F ++ + +P
Sbjct: 115 SDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQ 174
Query: 369 SCFQALKEARDSITSVHVS-DHEILTASLDCRIR--------RYDIRTGNLVTDYVGEPI 419
++ TSV +S I T + ++ I
Sbjct: 175 GTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 234
Query: 420 VDACFTRDCQCILTCSTD--------------ECLRLFDKATGELLEEYKGHKSGDFRIE 465
F+ + E + T + +
Sbjct: 235 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS 294
Query: 466 CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG-KAVVNSLCSHPTRKHIMSAC 523
+ + DGK+ W + +I+TL H + + L +
Sbjct: 295 LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 354
Query: 524 GNNVKLW 530
+VK
Sbjct: 355 VFDVKFL 361
Score = 42.9 bits (99), Expect = 7e-05
Identities = 30/308 (9%), Positives = 79/308 (25%), Gaps = 66/308 (21%)
Query: 171 RFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA---------------A 215
R + T + + R K ++ D+
Sbjct: 74 RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR 133
Query: 216 CDSSQIASGASDKSVILWEVTTGQP------------------VRRWREHASKVTCVKFN 257
S ++ + + +W+ V + T V +
Sbjct: 134 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS 193
Query: 258 EDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSN 317
E + +G + TV + + ++ E+ ++ S+ S+ S + L
Sbjct: 194 ERGLIA-TGFNNGTVQISE-----LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA 247
Query: 318 GLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEA 377
++ + L + +IG ++ + +
Sbjct: 248 -------------------IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 288
Query: 378 RDSITSVHVSDHE--ILTASLDCRIRRYDIRTGNLV------TDYVGEPIVDACFTRDCQ 429
+ S+ +D + +A D ++R +D++T + D +
Sbjct: 289 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGD 348
Query: 430 CILTCSTD 437
+
Sbjct: 349 SLAEPGVF 356
Score = 39.8 bits (91), Expect = 7e-04
Identities = 16/136 (11%), Positives = 34/136 (25%), Gaps = 10/136 (7%)
Query: 147 WSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA 206
S + + + F Y G + + H+
Sbjct: 230 NSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 289
Query: 207 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV----TCVKFNEDSSV 262
V + + S D + W+V T + + H + + +E
Sbjct: 290 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDS 349
Query: 263 VISGSQDNTVMMWDVK 278
+ ++DVK
Sbjct: 350 LAEPG------VFDVK 359
Score = 38.7 bits (88), Expect = 0.001
Identities = 18/149 (12%), Positives = 42/149 (28%), Gaps = 15/149 (10%)
Query: 369 SCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTD--------------- 413
+ A K I SV + ++ S D ++ +D + +
Sbjct: 5 ATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64
Query: 414 YVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 473
+V + + T S L + + ++ K + S +
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Query: 474 QIFCGSSDGKIYKWQLVDSSQISTLIHSV 502
+ S+D + + + +T I
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKF 153
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 63.0 bits (151), Expect = 3e-11
Identities = 32/346 (9%), Positives = 84/346 (24%), Gaps = 18/346 (5%)
Query: 201 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS 260
T GH V + + + +GA DK + +++ + + + H V +K+
Sbjct: 7 TLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65
Query: 261 SVVISGSQDNTVMMWDVK-------------SRSHHPIQVRCLNEALKEARDSITSVHSL 307
+V + + K R ++ + + + +RD+ V L
Sbjct: 66 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125
Query: 308 VKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQ--HLMVLLDFLGSTQIGDVTPIS 365
K + + + + + + + + D T I
Sbjct: 126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIV 185
Query: 366 IHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFT 425
+ + L ++ + ++ IR +L + +
Sbjct: 186 WDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 245
Query: 426 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLD-SKDSQIFCGSSDGKI 484
+ + + + + I S+ +
Sbjct: 246 VGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQF 305
Query: 485 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 530
+ L + I + S+ L
Sbjct: 306 NIYNLRSGKLVHANILK-DADQIWSVNFKGKTLVAAVEKDGQSFLE 350
Score = 61.4 bits (147), Expect = 8e-11
Identities = 49/340 (14%), Positives = 106/340 (31%), Gaps = 24/340 (7%)
Query: 170 TRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 229
T + +Y +T DK I++++ L GH V A + SG++D++
Sbjct: 17 TCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVW-ALKYAHGGILVSGSTDRT 75
Query: 230 VILWEVTT--GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQV 287
V +W++ V + + ++ +++GS+DNT+ +W + S P
Sbjct: 76 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG 135
Query: 288 RCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLM 347
+ L V + Y N L+ + + L
Sbjct: 136 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLY 195
Query: 348 VLLDFLGSTQIGDVTP-----------------ISIHNSCFQALKEARDSITSVHVSDHE 390
+L + L+ + + +SD
Sbjct: 196 ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKF 255
Query: 391 ILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL 450
+++A+ D IR +D + Y + IL ++ +++ +G+L
Sbjct: 256 LVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKL 315
Query: 451 L-EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 489
+ +I + + DG+ + L
Sbjct: 316 VHANILKDAD---QIWSVNFKGKTLVAAVEKDGQSFLEIL 352
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 61.0 bits (146), Expect = 1e-10
Identities = 40/357 (11%), Positives = 93/357 (26%), Gaps = 31/357 (8%)
Query: 205 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP--VRRWREHASKVTCVKFNEDSSV 262
++ D +QIA ++ V ++E + + V +EH +VT V + DS+
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 263 VISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNH------LS 316
+++ D +W +K R+ P V + + +
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125
Query: 317 NGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDV--------------T 362
+ + + +LS L+ +I
Sbjct: 126 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 185
Query: 363 PISIHNSCFQALKEARDSITSVHVSDHEILTASLD----CRIRRYDIRTGNLVTDYVGEP 418
+ + V S + A + + D + P
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP 245
Query: 419 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCG 478
++ F + ++ D LF + + G + + +
Sbjct: 246 LLAVTFITESS-LVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF--Q 302
Query: 479 SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLWTAE 533
+ D K + +H + ++ L + G + +W
Sbjct: 303 NLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Score = 57.6 bits (137), Expect = 1e-09
Identities = 36/341 (10%), Positives = 91/341 (26%), Gaps = 26/341 (7%)
Query: 175 DGSYCLTCGSDKKIKLWNPYRN--LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVIL 232
D + C ++ ++ ++ N + + H +V A DS++I + +D++ +
Sbjct: 18 DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYV 77
Query: 233 WEVTTGQPVRRWREH--ASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--------- 281
W + CV++ + GS + + + +
Sbjct: 78 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK 137
Query: 282 -HHPIQVRCLNEALKEARDSITSVHSLVK--------STKNHLSNGLLTKLVFAFRCKYL 332
V L+ + S + + +K+ F
Sbjct: 138 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 197
Query: 333 NGLLSGVL-MSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEI 391
+ V + + ++ + + E + +++ +
Sbjct: 198 SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSL 257
Query: 392 LTASLDCRIRRYDIRTGNLVTDYVGE-PIVDACFTRDCQCILTCSTDECLRLFDKATGEL 450
+ A DC + + + G + R + + +
Sbjct: 258 VAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG 317
Query: 451 LEEYKGHKSGDFRIECCLDSKD--SQIFCGSSDGKIYKWQL 489
HK+ +I K SQ DG + W +
Sbjct: 318 AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358
Score = 51.4 bits (121), Expect = 1e-07
Identities = 17/116 (14%), Positives = 36/116 (31%), Gaps = 6/116 (5%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
+ F + S + G D L+ ++GG ++ +++ D
Sbjct: 247 LAVTFITESSL-VAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD 305
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDS----SVVISGSQDNTVMMWDVKS 279
K + H + V+ + S + D + +WDV+S
Sbjct: 306 KKASSE-GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360
Score = 43.7 bits (101), Expect = 3e-05
Identities = 30/318 (9%), Positives = 75/318 (23%), Gaps = 35/318 (11%)
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSV-- 304
++C +N+D + + ++ V +++ + LKE +T V
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE------LKEHNGQVTGVDW 59
Query: 305 ----HSLVKSTKNHL----SNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGST 356
+ +V + + T + + +
Sbjct: 60 APDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 119
Query: 357 QIGDVTPISIHNSCFQALKEARDSITSVHVSDHEIL--TASLDCRIRRYDIRTGNLVTDY 414
I + C K R ++ S+ + +L S D + R + +
Sbjct: 120 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERP 179
Query: 415 VGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELL-----------------EEYKGH 457
P + + S + A G +
Sbjct: 180 APTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 239
Query: 458 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 517
S + +S + D + ++ + + +S R+
Sbjct: 240 ASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARE 299
Query: 518 HIMSACGNNVKLWTAEED 535
+ +A
Sbjct: 300 RFQNLDKKASSEGSAAAG 317
Score = 26.7 bits (57), Expect = 7.5
Identities = 5/23 (21%), Positives = 11/23 (47%)
Query: 217 DSSQIASGASDKSVILWEVTTGQ 239
SQ + D + +W+V + +
Sbjct: 340 KCSQFCTTGMDGGMSIWDVRSLE 362
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 58.8 bits (140), Expect = 3e-10
Identities = 37/300 (12%), Positives = 86/300 (28%), Gaps = 24/300 (8%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 257
+LKT GH + A + + SG+ D ++ W ++ ++H++ + + +
Sbjct: 5 VLKTISGHNKGIT----ALTVNPLISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNS 55
Query: 258 EDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEA------RDSITSVHSLVKST 311
+ D + K +V N A I +
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 115
Query: 312 KNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF 371
L++ + + + + + + L + + ISI S
Sbjct: 116 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET 175
Query: 372 QALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCI 431
+ + L + R + + + +
Sbjct: 176 Y-----IAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLV 230
Query: 432 LTCSTDECLRLFDKAT-GELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 490
T S D + ++ ++++ HK G + L S + +D I +W +V
Sbjct: 231 ATGSLDTNIFIYSVKRPMKIIKALNAHKDG---VNNLLWETPSTLVSSGADACIKRWNVV 287
Score = 53.8 bits (127), Expect = 2e-08
Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 2/111 (1%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
+ + S + +R + E + +A+G+ D
Sbjct: 177 IAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD 236
Query: 228 KSVILWEV-TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
++ ++ V + ++ H V + + S++V S D + W+V
Sbjct: 237 TNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLV-SSGADACIKRWNV 286
Score = 52.3 bits (123), Expect = 5e-08
Identities = 32/296 (10%), Positives = 78/296 (26%), Gaps = 13/296 (4%)
Query: 237 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPIQVRCLNEALK 295
+ ++ H +T + + +ISGS D +M W S H + L
Sbjct: 2 HDEVLKTISGHNKGITALTV----NPLISGSYDGRIMEWSSSSMHQDHSNLIVSL--DNS 55
Query: 296 EARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGS 355
+A++ + + ++ A + L +
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 115
Query: 356 TQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYV 415
+ + ++ S + T ++ + R ++
Sbjct: 116 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET 175
Query: 416 GEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQI 475
D + + F + + + ++ +
Sbjct: 176 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSK-----INAISWKPAEKGANEEEIEEDLV 230
Query: 476 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWT 531
GS D I+ + + +I +++ K VN+L + S +K W
Sbjct: 231 ATGSLDTNIFIYSVKRPMKIIKALNA-HKDGVNNLLWETPSTLVSSGADACIKRWN 285
Score = 34.9 bits (78), Expect = 0.016
Identities = 23/274 (8%), Positives = 76/274 (27%), Gaps = 10/274 (3%)
Query: 174 VDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILW 233
+ + ++ D +I W+ + H++ + + + +S + D ++ +
Sbjct: 19 LTVNPLISGSYDGRIMEWS-----SSSMHQDHSNLIVSL-DNSKAQEYSSISWDDTLKVN 72
Query: 234 EVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEA 293
+T + + + ++ + + Q T + + V
Sbjct: 73 GITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNY 132
Query: 294 LKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFL 353
+ + ++ S + ++L D
Sbjct: 133 VAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQ 192
Query: 354 GSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTD 413
+ K A + + + T SLD I Y ++ +
Sbjct: 193 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK 252
Query: 414 YVG---EPIVDACFTRDCQCILTCSTDECLRLFD 444
+ + + + + +++ D C++ ++
Sbjct: 253 ALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 285
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 59.0 bits (141), Expect = 5e-10
Identities = 10/114 (8%), Positives = 30/114 (26%), Gaps = 3/114 (2%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNP-YRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 226
RF D T + + + + G
Sbjct: 212 TIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL 271
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + +++ + ++ CV F++ + G N + +++ +
Sbjct: 272 N-RLAKYDLKQRKLIKA-ANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 323
Score = 49.4 bits (116), Expect = 5e-07
Identities = 29/329 (8%), Positives = 73/329 (22%), Gaps = 43/329 (13%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY-GGHAHEVNDATAACDSSQI-ASGASDKS 229
Y + + + + + + K+ A A D+
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 230 VILWEVTTGQPVRR------WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR--- 280
+ ++ T + E + + D V + + +
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 281 -------SHHPIQVRCLNEALKEARDSITSVHSLV---------------KSTKNHLSNG 318
+ ++ + + K T
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRN 183
Query: 319 LLTKLVFAFRCKYLNGLLSG------VLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQ 372
K A Y S + + D + + + +
Sbjct: 184 WNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 243
Query: 373 ALKEARDS---ITSVHVSDHEILTASLDCRIRRYDIRTGNLV-TDYVGEPIVDACFTRDC 428
+ A + T + + R+ +YD++ L+ + F +
Sbjct: 244 TQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKG 303
Query: 429 QCILTCSTDECLRLFDKATGELLEEYKGH 457
+ T L +F+ T E ++ K
Sbjct: 304 DKLYLGGTFNDLAVFNPDTLEKVKNIKLP 332
Score = 41.6 bits (96), Expect = 2e-04
Identities = 11/169 (6%), Positives = 35/169 (20%), Gaps = 14/169 (8%)
Query: 82 HDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFSLPRTITRILY 141
+ W + + + + + +
Sbjct: 171 KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSP------RHEFSMLYTIARFKDDKQDPA 224
Query: 142 ELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYC-----LTCGSDKKIKLWNPYRN 196
+ T + T G G ++ ++ +
Sbjct: 225 TADLLYGYLSVDLKT--GKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQR 282
Query: 197 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR 245
L+K H ++ G + + ++ T + V+ +
Sbjct: 283 KLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330
Score = 27.8 bits (60), Expect = 3.6
Identities = 5/28 (17%), Positives = 10/28 (35%)
Query: 254 VKFNEDSSVVISGSQDNTVMMWDVKSRS 281
+I + N + + DV S +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDT 29
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 56.4 bits (134), Expect = 3e-09
Identities = 23/275 (8%), Positives = 67/275 (24%), Gaps = 9/275 (3%)
Query: 12 TLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKARNNEFSTSPEDT 71
K ++ + + N + + + T +
Sbjct: 77 KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS 136
Query: 72 PLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLFS 131
A YV + D+ + + A + L +
Sbjct: 137 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYL 196
Query: 132 LPRTITRILYELPKEWSI-RVYRPLTVNRELFVLSGLMHT---RFPVDGSYCLTCGSDKK 187
R++ + +S V +P + + G Y L +
Sbjct: 197 SYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRS 256
Query: 188 IKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWRE 246
+ + ++ + ++ ++ ++V T + E
Sbjct: 257 SPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TE 312
Query: 247 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 281
+ +T ++ + D V+ D + + ++
Sbjct: 313 VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347
Score = 49.5 bits (116), Expect = 6e-07
Identities = 35/352 (9%), Positives = 87/352 (24%), Gaps = 37/352 (10%)
Query: 173 PVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD--KSV 230
P+DG + S + + + +LK + D+ + +
Sbjct: 12 PLDGDL-IAFVSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFL 68
Query: 231 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI----- 285
+++ TG+ ++ E+ V + + + + + +M D+++ I
Sbjct: 69 GIYDYRTGK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE 127
Query: 286 ----QVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLM 341
+ + A + + + +
Sbjct: 128 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFD 187
Query: 342 STQHLMVLLDFLGSTQIGDVT---PISIHNSCFQALKEARDSITSVHVSDHEILTAS--- 395
+ + L + D S + S + + + +
Sbjct: 188 ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEY 247
Query: 396 ----LDCRIRRYDIRTGNLVTDYVGEPIVDA----CFTRDCQCILTCSTDECLRLFDKAT 447
+ R ++ G+ E + L +D T
Sbjct: 248 DLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT 307
Query: 448 GELLEEYKGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTL 498
++ E S D + + DGKIY + L T+
Sbjct: 308 RKVTEVKNNLTDLRL-------SADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
Score = 45.6 bits (106), Expect = 8e-06
Identities = 25/308 (8%), Positives = 76/308 (24%), Gaps = 26/308 (8%)
Query: 165 SGLMHTRFPVDGSYCLTCGSD--KKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 222
+ + R D G+ + +++ R + + + V +
Sbjct: 43 LRIRYVRRGGDTKVAFIHGTREGDFLGIYDY-RTGKAEKFEENLGNVFAMGVDRNGKFAV 101
Query: 223 SGAS----------DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 272
+ E + + + + G +
Sbjct: 102 VANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 161
Query: 273 MMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYL 332
++D++ R ++ +++ L + + + ++ F K
Sbjct: 162 HVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPF 221
Query: 333 NGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHN---------SCFQALKEARDSITS 383
L + L+ + + + L+ + +
Sbjct: 222 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSV 281
Query: 384 VHVSD--HEILTASLDCRIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLR 441
+ A + +YD++T + V + D + D + ++ D +
Sbjct: 282 PVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE--VKNNLTDLRLSADRKTVMVRKDDGKIY 339
Query: 442 LFDKATGE 449
F E
Sbjct: 340 TFPLEKPE 347
Score = 42.2 bits (97), Expect = 1e-04
Identities = 5/71 (7%), Positives = 18/71 (25%), Gaps = 4/71 (5%)
Query: 172 FPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 231
+Y + ++ + + + D + D + D +
Sbjct: 284 HGEFAAYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIY 339
Query: 232 LWEVTTGQPVR 242
+ + + R
Sbjct: 340 TFPLEKPEDER 350
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 55.2 bits (131), Expect = 6e-09
Identities = 27/325 (8%), Positives = 76/325 (23%), Gaps = 38/325 (11%)
Query: 178 YCLTCGSDKKIKLWNPYRNLLLKTY--GGHAHEVNDATAACDSSQI-ASGASDKSVILWE 234
Y L K+ + + + + K A A+ +S++ +
Sbjct: 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62
Query: 235 VTTGQPVRRWREHA-----SKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRC 289
+ TG+ + R + + D + + + + +
Sbjct: 63 LVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDA 122
Query: 290 LNEALKEARDSITSVHSLVKS------------------TKNHLSNGLLTKLVFAFRCKY 331
+ ++A ++ + L + L + A
Sbjct: 123 ETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQ 182
Query: 332 LNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF-----------QALKEARDS 380
+ L + +M + I P + + ++
Sbjct: 183 PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242
Query: 381 ITSVHVSDHEILTASLDCRIRRYDIRTGNLV-TDYVGEPIVDACFTRDCQCILTCSTDEC 439
S V+ + + +D+ + + + D +
Sbjct: 243 YFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGD 302
Query: 440 LRLFDKATGELLEEYKGHKSGDFRI 464
L +D T E + + +
Sbjct: 303 LAAYDAETLEKKGQVDLPGNASMSL 327
Score = 50.6 bits (119), Expect = 2e-07
Identities = 10/112 (8%), Positives = 31/112 (27%), Gaps = 2/112 (1%)
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
D + + + +V + A + ++ + +
Sbjct: 202 FYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI-MDVFYFSTAVNPAKTRAFGAYN 260
Query: 229 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ +++ ++R V + D S V G + +D ++
Sbjct: 261 VLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311
Score = 45.6 bits (106), Expect = 9e-06
Identities = 14/177 (7%), Positives = 38/177 (21%), Gaps = 3/177 (1%)
Query: 71 TPLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGCPQRWAIKEGYGCALLSKQRTHPLLF 130
+ D V + + + F
Sbjct: 143 ARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPF 202
Query: 131 SLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDGSYC--LTCGSDKKI 188
R + T + + + F + G+ +
Sbjct: 203 YTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVL 262
Query: 189 KLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR 245
+ ++ +N +K H + D S + G + + ++ T + +
Sbjct: 263 ESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318
Score = 33.2 bits (74), Expect = 0.073
Identities = 17/158 (10%), Positives = 34/158 (21%), Gaps = 17/158 (10%)
Query: 391 ILTASLDCRIRRYDIRTGNLV----TDYVGEPIVDACFTRDCQCIL-TCSTDECLRLFDK 445
IL + ++ D + G + + T + E L D
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 446 ATGELLEEYKGH---KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV---------DSS 493
TGE L + L + S ++ D+
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 494 QISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWT 531
+S + L + + +
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDP 161
Score = 28.2 bits (61), Expect = 2.6
Identities = 13/219 (5%), Positives = 45/219 (20%), Gaps = 4/219 (1%)
Query: 1 MCRNNCRFNRSTLLKNLKHCDSTLWTSKLNFRQLVRSHNVDLCFTPMIIADSFIKSSKAR 60
+ + L K ++ + L + + ++ ++
Sbjct: 112 VQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKP 171
Query: 61 NNEFSTSPEDTPLVVQFASNNHDDFVRATQYVAPHCNGVDLNCGC----PQRWAIKEGYG 116
+ P V+ + + V AT + + + ++ G
Sbjct: 172 IQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231
Query: 117 CALLSKQRTHPLLFSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLMHTRFPVDG 176
+ + + + + + DG
Sbjct: 232 AMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDG 291
Query: 177 SYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 215
S G+ + ++ + +
Sbjct: 292 STVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASV 330
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 54.5 bits (129), Expect = 1e-08
Identities = 26/326 (7%), Positives = 85/326 (26%), Gaps = 33/326 (10%)
Query: 198 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWR---EHASKVTCV 254
+++ ++D S + + D S+ +++ + + C
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 255 KFNEDSS-VVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDSITSVHSLVK---- 309
F +++ + G+ ++ D+ +
Sbjct: 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDG 122
Query: 310 -----STKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGDVTPI 364
+N+ + K + + K N + + S++ ++ + + +
Sbjct: 123 LIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCED 182
Query: 365 SIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDYVGEPIV---- 420
LK + + +S+D R+ +
Sbjct: 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242
Query: 421 -------------DACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC 467
F+ + + T +D + ++ T + ++ +
Sbjct: 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED---SVVK 299
Query: 468 LDSKDSQIFCGSSDGKIYKWQLVDSS 493
+ D+ + +SD +D +
Sbjct: 300 IACSDNILCLATSDDTFKTNAAIDQT 325
Score = 49.5 bits (116), Expect = 5e-07
Identities = 24/323 (7%), Positives = 77/323 (23%), Gaps = 32/323 (9%)
Query: 239 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS---------HHPIQVRC 289
Q V+ + ++ +K S+++ S D ++ ++ ++ + + C
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 290 LNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVL 349
N + + + L + +
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 350 LDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGN 409
+ + + ++ I ++ + ++ + +++ + +
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE 181
Query: 410 LVT------DYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELL------------ 451
+ A ++ + S D + +
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241
Query: 452 -EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSL 510
K + ++ SDG I W L +I + +
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE---DSVV 298
Query: 511 CSHPTRKHIMSACGNN-VKLWTA 532
+ + A ++ K A
Sbjct: 299 KIACSDNILCLATSDDTFKTNAA 321
Score = 47.2 bits (110), Expect = 3e-06
Identities = 14/142 (9%), Positives = 44/142 (30%), Gaps = 18/142 (12%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWN---------------PYRNLLLKTYGGHAHEVNDA 212
P + D ++ + + L A+ VN
Sbjct: 198 DVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSI 257
Query: 213 TAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 272
+ + + SD + W + T + ++ + + ++ + VK +++ + D+T
Sbjct: 258 EFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTF 316
Query: 273 MMWDV--KSRSHHPIQVRCLNE 292
++ + + + +
Sbjct: 317 KTNAAIDQTIELNASSIYIIFD 338
Score = 39.1 bits (89), Expect = 0.001
Identities = 13/150 (8%), Positives = 38/150 (25%), Gaps = 26/150 (17%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTY----GGHAHEVNDATAACDSSQIAS 223
+ S + ++ +++ + G + A + A
Sbjct: 152 KIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC 211
Query: 224 GASDKSVILWEVTTGQPV---------------RRWREHASKVTCVKFNEDSSVVISGSQ 268
+ D V + + A V ++F+ + +
Sbjct: 212 SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271
Query: 269 DNTVMMWDVKSR-------SHHPIQVRCLN 291
D + W++++R + V +
Sbjct: 272 DGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 50.4 bits (119), Expect = 3e-07
Identities = 25/281 (8%), Positives = 66/281 (23%), Gaps = 35/281 (12%)
Query: 212 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF--------NEDSSVV 263
A A+ ++ A G V +++ T P+ + V + ++
Sbjct: 80 ALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLL 139
Query: 264 ISGSQDNTVMMWDVKSR------------------SHHPIQVRCLNEALKEARDSITSVH 305
+ V + C + +
Sbjct: 140 FFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199
Query: 306 SLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGV---LMSTQHLMVLLDFLGSTQIGDVT 362
+V + N + + + S + + + G+
Sbjct: 200 GIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNE--SGRK 257
Query: 363 PISIHNSCFQALKEARD-SITSVHVSDHEILTASLDCRIRRYDIRTGNLV-TDYVGEPIV 420
+ ++ FQ + + ++ + +H + G G
Sbjct: 258 ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSD 317
Query: 421 DACFTRDCQCIL--TCSTDECLRLFDKATGELLEEYKGHKS 459
+D + E L ++D A+ + + K
Sbjct: 318 AIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG 358
Score = 40.3 bits (93), Expect = 4e-04
Identities = 16/193 (8%), Positives = 39/193 (20%), Gaps = 27/193 (13%)
Query: 110 AIKEGYGCALLSKQRTHPLL-FSLPRTITRILYELPKEWSIRVYRPLTVNRELFVLSGLM 168
+ + C + S P ++ + V T + +
Sbjct: 160 QLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA--- 216
Query: 169 HTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 228
+ G S + G+ Q+ + +
Sbjct: 217 -AQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT 275
Query: 229 SVI-------------------LWEVTTGQPVRRWREHASKVTCVKFNED--SSVVISGS 267
I + GQ + + +D S + +
Sbjct: 276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSA 334
Query: 268 QDNTVMMWDVKSR 280
+ ++D S
Sbjct: 335 GTEVLDIYDAASD 347
Score = 29.2 bits (64), Expect = 1.3
Identities = 6/71 (8%), Positives = 16/71 (22%), Gaps = 8/71 (11%)
Query: 222 ASGASDKSVILWEVTTGQPVRRWREHASKVTCV--------KFNEDSSVVISGSQDNTVM 273
A A + G + + + + G + + V
Sbjct: 40 AYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVE 99
Query: 274 MWDVKSRSHHP 284
++D +
Sbjct: 100 VFDPVTFLPIA 110
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 48.6 bits (114), Expect = 9e-07
Identities = 39/284 (13%), Positives = 76/284 (26%), Gaps = 35/284 (12%)
Query: 212 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV-------- 263
A A+ S+IA G V +++ T P + V + +
Sbjct: 62 AHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLL 121
Query: 264 -ISGSQDNTVMMWDVKSRSH-HPIQVRCLNEALKEARDSITSVHS-----LVKSTKNHLS 316
S V + D++ ++ + V A D+ V
Sbjct: 122 FYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 181
Query: 317 NGLLTKLVFAFRCKYLNGLLSG-----VLMSTQHLMVLLDFLGSTQIGDVTPISIHNSCF 371
T++ +N ++ T + L S + +
Sbjct: 182 EITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAE 241
Query: 372 QALKEARDSITSVHVS------------DHEILTASLDCRIRRYDIRTGNLV-TDYVGEP 418
+A V E + + D +TG + +G
Sbjct: 242 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE 301
Query: 419 IVDACFTRDCQCIL--TCSTDECLRLFDKATGELLEEYKGHKSG 460
I ++D + +L + D+ L + D +GE L G
Sbjct: 302 IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG 345
Score = 38.2 bits (87), Expect = 0.002
Identities = 9/96 (9%), Positives = 28/96 (29%), Gaps = 3/96 (3%)
Query: 166 GLMHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ--IAS 223
+ + + + + L + HE++ + D A
Sbjct: 260 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYAL 318
Query: 224 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 259
DK++ + + +G+ +R + + +
Sbjct: 319 STGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 44.2 bits (103), Expect = 2e-05
Identities = 31/292 (10%), Positives = 60/292 (20%), Gaps = 49/292 (16%)
Query: 212 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS------VVIS 265
A S+ + G V + + TT A V +++ +
Sbjct: 32 VVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYV 91
Query: 266 GSQDNTVMMWDVKSRS---HHPIQVRCLNEALKEARDSITSV--------------HSLV 308
+ + + + S I A D T++
Sbjct: 92 ANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEA 151
Query: 309 KSTKNHLSNGLLTKLVFAFRCKYLNGLLSG------VLMSTQHLMVLLDFLGSTQIGDVT 362
K T + + F +Y L S
Sbjct: 152 KRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAER 211
Query: 363 PISIHNSCFQALKEARDSITSVHVSD------------HEILTASLDCRIRRYDIRTGNL 410
Q + + +
Sbjct: 212 AEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQK 271
Query: 411 VTDYVGEPIVDACFTRDCQCIL--TCSTDECLRLFDKATGELLEEYKGHKSG 460
V EP+V + D + + +T + + + D TG L K +
Sbjct: 272 V-----EPLVSIQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNT 317
Score = 32.7 bits (73), Expect = 0.096
Identities = 14/147 (9%), Positives = 34/147 (23%), Gaps = 19/147 (12%)
Query: 403 YDIRTGNLVTDYVGEPIVDACFTRDCQCILTCST----------DECLRLFDKATGELLE 452
YD L+ G D + + +T + + + D T +
Sbjct: 3 YDADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAG 62
Query: 453 EYKGHKSGDFRIECCLDSKDSQ----IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVN 508
E + ++ S ++ + + S+ S
Sbjct: 63 EIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKM---LSEIDTAAC 119
Query: 509 SLCSHPTRKHIMSACGNN--VKLWTAE 533
L + C + + +
Sbjct: 120 VLAYPAGDDRFTALCESGKALTVTLDA 146
Score = 30.3 bits (67), Expect = 0.61
Identities = 5/79 (6%), Positives = 18/79 (22%), Gaps = 6/79 (7%)
Query: 176 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 235
+ K+ ++ + A+ V+ +
Sbjct: 249 TQVWVYDLKSKQRVARWDLAQQKVEPLVSIQ-----VSEDDKPLFYGLTATSDLVV-MDA 302
Query: 236 TTGQPVRRWREHASKVTCV 254
TG ++ + + +
Sbjct: 303 RTGALQHVEKQIGNTSSLL 321
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 39.9 bits (91), Expect = 5e-04
Identities = 8/68 (11%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED-SSVVISGSQDNTVMMWDVKSRS 281
+ + ++ + +VT+ + S + D + V ++ + N V + D + +
Sbjct: 7 ANSESDNISVIDVTSNKVTATI-PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 282 HHPIQVRC 289
Sbjct: 66 VIATVPAG 73
Score = 34.8 bits (78), Expect = 0.018
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Query: 233 WEVTTGQPVRRWREHASKVTCVKFNEDSS-VVISGSQDNTVMMWDVKSR 280
+ T + R + D V ++ S NTV + D +
Sbjct: 229 IDTGTNKITARI-PVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276
Score = 32.5 bits (72), Expect = 0.12
Identities = 31/281 (11%), Positives = 73/281 (25%), Gaps = 2/281 (0%)
Query: 181 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP 240
I + + N + T ++ + + + + A V + + T
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV 66
Query: 241 VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQVRCLNEALKEARDS 300
+ +S + V ++ +T+ + D S + +
Sbjct: 67 IATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPD 126
Query: 301 ITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGVLMSTQHLMVLLDFLGSTQIGD 360
++ K +TK V + V + V S + D
Sbjct: 127 GKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVID 186
Query: 361 VTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRIRRYDIRTGNLVTDY-VGEPI 419
S+ ++ + ++ + + D T + VG
Sbjct: 187 TVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDP 246
Query: 420 VDACFTRDCQCIL-TCSTDECLRLFDKATGELLEEYKGHKS 459
T D + + S + + D AT + K+
Sbjct: 247 AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKN 287
Score = 27.1 bits (58), Expect = 6.0
Identities = 4/77 (5%), Positives = 16/77 (20%), Gaps = 2/77 (2%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI-ASGAS 226
+ + + N + + D ++ + +
Sbjct: 206 AVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSF 264
Query: 227 DKSVILWEVTTGQPVRR 243
+V + + T
Sbjct: 265 CNTVSVIDTATNTITAT 281
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 37.9 bits (87), Expect = 0.002
Identities = 7/56 (12%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Query: 227 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 282
+ L + +T + + V + + + +D V M D+ +
Sbjct: 41 AGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDLWMKEP 95
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 36.9 bits (84), Expect = 0.005
Identities = 6/58 (10%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 223 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 280
+ + L + + + V+ + V + + ++ +D + M D+ ++
Sbjct: 37 TLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAK 93
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 31.5 bits (70), Expect = 0.19
Identities = 14/141 (9%), Positives = 41/141 (29%), Gaps = 4/141 (2%)
Query: 402 RYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 461
+ ++TG LV+ + + + + G + +K+ D
Sbjct: 37 QLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMD 96
Query: 462 FRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS 521
+ + + + + + L ++ + A S + + +
Sbjct: 97 QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEP 156
Query: 522 ACGNN----VKLWTAEEDYGQ 538
+C N V + + G+
Sbjct: 157 SCTQNVNHGVLVVGYGDLNGK 177
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 31.0 bits (68), Expect = 0.34
Identities = 20/322 (6%), Positives = 77/322 (23%), Gaps = 27/322 (8%)
Query: 223 SGASDKSVILWEV--TTGQPVRRWREHASKVTCVKFNED-SSVVISGSQDNTVMMWDVKS 279
+ + + +W + + + + +V + + D + + + V+ + +
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 280 RSHHPIQVRCLNEALKEARDSITSVHSLVKSTKNHLSNGLLTKLVFAFRCKYLNGLLSGV 339
S+ + + F F Y G +S
Sbjct: 69 DDGALTFAAESA--------LPGSLTHISTDHQGQ----------FVFVGSYNAGNVSVT 110
Query: 340 LMSTQHLMVLLD-FLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDC 398
+ + ++D G + + + + D ++
Sbjct: 111 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAE 170
Query: 399 RIRRYDIRTGNLVTDYVGEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK 458
++V + + + + E + +
Sbjct: 171 VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 230
Query: 459 SGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRK 517
C + I + + + + + + + K
Sbjct: 231 WAADIHITP--DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGK 288
Query: 518 HIMSAC--GNNVKLWTAEEDYG 537
++++A +++ ++ + G
Sbjct: 289 YLIAAGQKSHHISVYEIVGEQG 310
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 29.9 bits (67), Expect = 0.86
Identities = 5/53 (9%), Positives = 14/53 (26%)
Query: 225 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 277
K ++ + R + + + +G TV + +
Sbjct: 235 GDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAI 287
>d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C
{Listeria monocytogenes [TaxId: 1639]}
Length = 274
Score = 27.5 bits (60), Expect = 4.3
Identities = 25/150 (16%), Positives = 53/150 (35%), Gaps = 11/150 (7%)
Query: 341 MSTQHLMVLLDFLGSTQIGDVTPISIHNSCFQALKEARDSITSVHVSDHEILTASLDCRI 400
++T+ M L +T + ++ H++ + + L L+ I
Sbjct: 1 VTTKQWMSALP--DTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGI 58
Query: 401 RRYDIRTGNLVTDYVGEPIVDACFTRDCQCI---LTCSTDECLRLFDKATGELLEEYKGH 457
R DIR + + Y G ++A + + I L + E + + L +E +
Sbjct: 59 RYIDIRAKDNLNIYHGPIFLNASLSGVLETITQFLKKNPKETIIM------RLKDEQNSN 112
Query: 458 KSGDFRIECCLDSKDSQIFCGSSDGKIYKW 487
S D+RI+ ++ + K
Sbjct: 113 DSFDYRIQPLINIYKDYFYTTPRTDTSNKI 142
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 26.4 bits (56), Expect = 8.4
Identities = 10/116 (8%), Positives = 29/116 (25%)
Query: 168 MHTRFPVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 227
G+ +T + ++ N + + + +
Sbjct: 143 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT 202
Query: 228 KSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 283
V+ + + V + D +V ++ ++ V+ HH
Sbjct: 203 NQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHH 258
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]}
Length = 118
Score = 25.7 bits (56), Expect = 8.7
Identities = 19/109 (17%), Positives = 32/109 (29%), Gaps = 25/109 (22%)
Query: 360 DVTPISI----HNSCFQALKE------ARDSITSVHVSDHEILTASLDCRIRRYDIRTGN 409
DVTP+S+ L + S D++ + + R
Sbjct: 5 DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAADNK 64
Query: 410 LVTDYV---------GEPIVDACFTRDCQCILTCSTDECLRLFDKATGE 449
+ + G P ++ F D IL S DK +G+
Sbjct: 65 SLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSA------KDKNSGK 107
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.134 0.419
Gapped
Lambda K H
0.267 0.0487 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,980,510
Number of extensions: 88852
Number of successful extensions: 525
Number of sequences better than 10.0: 1
Number of HSP's gapped: 372
Number of HSP's successfully gapped: 141
Length of query: 540
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 450
Effective length of database: 1,171,896
Effective search space: 527353200
Effective search space used: 527353200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.5 bits)