BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18232
(486 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O88696|CLPP_MOUSE Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial OS=Mus musculus GN=Clpp PE=2 SV=1
Length = 272
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/243 (55%), Positives = 158/243 (65%), Gaps = 58/243 (23%)
Query: 23 FQGLSLGHLAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSL 82
+ +S L ++ H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGPIDDS+
Sbjct: 32 WTAVSCSPLRRSLHGTATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSV 91
Query: 83 SSVVVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMA 142
+S+V+AQLLFLQSES+KKPIHMYINSPGG VT+GL IYDTMQY+L PI TWCVGQA SM
Sbjct: 92 ASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMG 151
Query: 143 SLLLAAGEKGMRHSLPNSRIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASL 202
SLLLAAG GMRHSLPNSRIMIHQPSGG + GQA
Sbjct: 152 SLLLAAGSPGMRHSLPNSRIMIHQPSGGAR---------------------GQA------ 184
Query: 203 LLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSI 262
TDI IQAEEI+ LKKQ+ +Y KHT S+
Sbjct: 185 -------------------------------TDIAIQAEEIMKLKKQLYNIYAKHTKQSL 213
Query: 263 EKI 265
+ I
Sbjct: 214 QVI 216
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 359 FQGLSLGHLAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
+ +S L ++ H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGP+
Sbjct: 32 WTAVSCSPLRRSLHGTATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPID 88
>sp|Q16740|CLPP_HUMAN Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial OS=Homo sapiens GN=CLPP PE=1 SV=1
Length = 277
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/235 (57%), Positives = 154/235 (65%), Gaps = 58/235 (24%)
Query: 31 LAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQL 90
L + H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGPIDDS++S+V+AQL
Sbjct: 44 LQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQL 103
Query: 91 LFLQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGE 150
LFLQSES+KKPIHMYINSPGG VT+GL IYDTMQY+L PI TWCVGQA SM SLLLAAG
Sbjct: 104 LFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGT 163
Query: 151 KGMRHSLPNSRIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKG 210
GMRHSLPNSRIMIHQPSGG + GQA
Sbjct: 164 PGMRHSLPNSRIMIHQPSGGAR---------------------GQA-------------- 188
Query: 211 MRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI IQAEEI+ LKKQ+ +Y KHT S++ I
Sbjct: 189 -----------------------TDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVI 220
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 367 LAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
L + H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGP+
Sbjct: 44 LQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPID 92
>sp|Q2KHU4|CLPP_BOVIN Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial OS=Bos taurus GN=CLPP PE=2 SV=1
Length = 272
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 152/233 (65%), Gaps = 58/233 (24%)
Query: 33 KTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLF 92
+ H +A + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGPIDDS++S+V+AQLLF
Sbjct: 42 RNLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLF 101
Query: 93 LQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKG 152
LQSES+KKPIHMYINSPGG VTSGL IYDTMQY+L PI TWCVGQA SM SLLLAAG G
Sbjct: 102 LQSESNKKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPG 161
Query: 153 MRHSLPNSRIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMR 212
MRHSLPNSRIMIHQPSGG + GQA
Sbjct: 162 MRHSLPNSRIMIHQPSGGAR---------------------GQA---------------- 184
Query: 213 HSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI IQAEEI+ LKKQ+ +Y KHT S++ I
Sbjct: 185 ---------------------TDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVI 216
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 369 KTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
+ H +A + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGP+
Sbjct: 42 RNLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPID 88
>sp|Q1QL76|CLPP_NITHX ATP-dependent Clp protease proteolytic subunit OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=clpP PE=3 SV=1
Length = 211
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 141/221 (63%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D++S +VVAQLLFL++++ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDNMSMLVVAQLLFLEADNPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP+AT C GQA SM SLLLAAGEK MRH+LPN+RIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVATLCTGQAASMGSLLLAAGEKDMRHALPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI+NLKK++N +YVKHTG + + I
Sbjct: 142 ---------TDIMLHAQEILNLKKRLNEIYVKHTGQTYKAI 173
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVE 45
>sp|B6JGU7|CLPP_OLICO ATP-dependent Clp protease proteolytic subunit OS=Oligotropha
carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
GN=clpP PE=3 SV=1
Length = 210
Score = 221 bits (563), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 140/221 (63%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +S+++VAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLEAENPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP++T C GQA SM SLLLAAGEK MR SLPNSRIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNSRIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI+NLKK++N +YVKHTG S + I
Sbjct: 142 ---------TDIMLHAQEILNLKKRLNEIYVKHTGQSYQAI 173
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVE 45
>sp|Q89KG1|CLPP2_BRAJA ATP-dependent Clp protease proteolytic subunit 2 OS=Bradyrhizobium
japonicum (strain USDA 110) GN=clpP2 PE=3 SV=1
Length = 211
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 140/221 (63%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII + GP++D +S++VVAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP++T C GQA SM SLLLAAGEK MR SLPN+RIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI+NLKK++N +YVKHTG + + I
Sbjct: 142 ---------TDIMLHAQEILNLKKRLNEIYVKHTGQTYKTI 173
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII + GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVE 45
>sp|Q3SRD2|CLPP_NITWN ATP-dependent Clp protease proteolytic subunit OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=clpP PE=3
SV=1
Length = 212
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 140/221 (63%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V G ++D++S +VVAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGGVEDNMSMLVVAQLLFLEAENPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP+AT C GQA SM SLLLAAGEK MRH+LPN+RIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVATLCTGQAASMGSLLLAAGEKDMRHALPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI++LKK++N +YVKHTG + + I
Sbjct: 142 ---------TDIMLHAQEILSLKKRLNEIYVKHTGQTYQAI 173
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V G V
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGGVE 45
>sp|Q5HBX5|CLPP_EHRRW ATP-dependent Clp protease proteolytic subunit OS=Ehrlichia
ruminantium (strain Welgevonden) GN=clpP PE=3 SV=1
Length = 198
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 141/221 (63%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDIYSRLL+ERII + GPI+D ++S+VVAQL+FL++E+ +K I M
Sbjct: 3 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDISM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQYV P IAT C+GQA SM SLLLAAGEKGMR +LPNSRIMI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRIMI 122
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 123 HQPSGGFQ---------------------GQA---------------------------- 133
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI+I A+EI+N+K ++N +YVKHTG + ++
Sbjct: 134 ---------TDIEIHAKEILNIKSRLNYIYVKHTGRELSEV 165
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDIYSRLL+ERII + GP+
Sbjct: 3 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIE 37
>sp|A8WPG6|CLPP1_CAEBR ATP-dependent Clp protease proteolytic subunit 1, mitochondrial
OS=Caenorhabditis briggsae GN=clpp-1 PE=3 SV=2
Length = 219
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 116/135 (85%)
Query: 38 SATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSES 97
S+T +R +P VI+ G+GER YDIYSRLLR+RI+C+M P+DD ++S ++AQLLFLQSES
Sbjct: 16 SSTQARVGIPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFMASALIAQLLFLQSES 75
Query: 98 SKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSL 157
SKKPIHMYINSPGGSVT+GL IYDTMQ + P+ATW +GQA SM SLLLAAGEKGMR +L
Sbjct: 76 SKKPIHMYINSPGGSVTAGLAIYDTMQMISAPVATWVIGQASSMGSLLLAAGEKGMRSAL 135
Query: 158 PNSRIMIHQPSGGVQ 172
PN+RIM+HQPSGG Q
Sbjct: 136 PNARIMVHQPSGGAQ 150
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
Query: 164 IHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 223
I+ P G V GL IYDTMQ + P+ATW +GQA SM SLLLAAGEKGMR +LPN+RIM+H
Sbjct: 84 INSPGGSVTAGLAIYDTMQMISAPVATWVIGQASSMGSLLLAAGEKGMRSALPNARIMVH 143
Query: 224 QPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS-TVCFYVLHDPYICF 282
QPSGG QG +DI I+AEEI LKK++N +YV HTG+S ++I ++ ++ + F
Sbjct: 144 QPSGGAQGTCSDIVIRAEEITRLKKRLNEIYVHHTGISYDEIERTLDRDRFMSAQEALKF 203
Query: 283 WINGLYVKHTG 293
+ KHTG
Sbjct: 204 GLVDKIEKHTG 214
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 374 SATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVSLY 417
S+T +R +P VI+ G+GER YDIYSRLLR+RI+C+M PV +
Sbjct: 16 SSTQARVGIPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDF 59
>sp|Q215J2|CLPP_RHOPB ATP-dependent Clp protease proteolytic subunit OS=Rhodopseudomonas
palustris (strain BisB18) GN=clpP PE=3 SV=1
Length = 210
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 137/221 (61%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +S++ VAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLTVAQLLFLEAENPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP++T C GQA SM SLLLAAG MR SLPNSRIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHPDMRFSLPNSRIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI+NLKK++N +YVKHTG + + I
Sbjct: 142 ---------TDIMLHAQEILNLKKRLNEIYVKHTGQTYKAI 173
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVE 45
>sp|B3Q7P5|CLPP_RHOPT ATP-dependent Clp protease proteolytic subunit OS=Rhodopseudomonas
palustris (strain TIE-1) GN=clpP PE=3 SV=1
Length = 212
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 138/221 (62%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +S+++VAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLEAENPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP++T C GQA SM SLLLAAG K MR SLPN+RIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI+NLKK++N +YV HTG + + I
Sbjct: 142 ---------TDIMLHAQEILNLKKRLNEIYVHHTGQTYKAI 173
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVE 45
>sp|Q6N5L3|CLPP_RHOPA ATP-dependent Clp protease proteolytic subunit OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=clpP PE=3
SV=1
Length = 212
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 138/221 (62%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +S+++VAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLEAENPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP++T C GQA SM SLLLAAG K MR SLPN+RIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI+NLKK++N +YV HTG + + I
Sbjct: 142 ---------TDIMLHAQEILNLKKRLNEIYVHHTGQTYKAI 173
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVE 45
>sp|Q4FM94|CLPP_PELUB ATP-dependent Clp protease proteolytic subunit OS=Pelagibacter
ubique (strain HTCC1062) GN=clpP PE=3 SV=1
Length = 203
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 141/224 (62%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQ+ +GERAYDIYSRLL+ERII ++GPI+D+++S+V AQLLFL+SE KK I++
Sbjct: 12 LVPMVVEQSNKGERAYDIYSRLLKERIIFLVGPINDNVASLVTAQLLFLESEDPKKEINL 71
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GLGIYDTMQY+ P ++T C+GQA SM S LLAAG+KG R SLPNSRIM+
Sbjct: 72 YINSPGGLVTAGLGIYDTMQYIKPDVSTLCIGQAASMGSFLLAAGKKGKRFSLPNSRIMV 131
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPS G Q GQA
Sbjct: 132 HQPSAGFQ---------------------GQA---------------------------- 142
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
TDI+I A E++ LKK++N +Y KHTG S++ + K+
Sbjct: 143 ---------TDIEIHANEVLALKKRLNEIYSKHTGKSVDDVKKA 177
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 33/35 (94%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQ+ +GERAYDIYSRLL+ERII ++GP++
Sbjct: 12 LVPMVVEQSNKGERAYDIYSRLLKERIIFLVGPIN 46
>sp|Q135W7|CLPP_RHOPS ATP-dependent Clp protease proteolytic subunit OS=Rhodopseudomonas
palustris (strain BisB5) GN=clpP PE=3 SV=1
Length = 214
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 138/221 (62%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII + GP++D +S++VVAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP++T C GQA SM SLLLAAG K MR SLPN+RIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI+NLKK++N +YV HTG + + I
Sbjct: 142 ---------TDIMLHAQEILNLKKRLNEIYVHHTGQTYKAI 173
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII + GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVE 45
>sp|Q07NN6|CLPP_RHOP5 ATP-dependent Clp protease proteolytic subunit OS=Rhodopseudomonas
palustris (strain BisA53) GN=clpP PE=3 SV=1
Length = 211
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 138/221 (62%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII + GP++D +S++VVAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP++T C GQA SM SLLL AG K MR SLPN+RIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLCAGAKDMRFSLPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI+NLKK++N +YVKHTG + + I
Sbjct: 142 ---------TDIMLHAQEILNLKKRLNEIYVKHTGQTYKAI 173
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII + GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVE 45
>sp|Q2IWZ4|CLPP_RHOP2 ATP-dependent Clp protease proteolytic subunit OS=Rhodopseudomonas
palustris (strain HaA2) GN=clpP PE=3 SV=1
Length = 212
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 138/221 (62%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII + GP++D +S++VVAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ PP++T C GQA SM SLLLAAG K MR SLPN+RIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI+NLKK++N +YV HTG + + I
Sbjct: 142 ---------TDIMLHAQEILNLKKRLNEIYVHHTGQTYKAI 173
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII + GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVE 45
>sp|A8HYF2|CLPP_AZOC5 ATP-dependent Clp protease proteolytic subunit OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=clpP PE=3 SV=1
Length = 210
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 139/221 (62%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDIYSRLL+ERII + GP++D +S++ VAQLLFL++E+ KK I M
Sbjct: 12 LVPMVVEQTNRGERAYDIYSRLLKERIIFLTGPVEDGMSTLAVAQLLFLEAENPKKEISM 71
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ P ++T C+GQA SM SLLL AGEKG+R +LPN+RIM+
Sbjct: 72 YINSPGGVVTSGLAIYDTMQFIRPAVSTLCIGQAASMGSLLLTAGEKGLRFALPNARIMV 131
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQ IM+H
Sbjct: 132 HQPSGGFQ---------------------GQVTD---------------------IMLH- 148
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
A+EI++LKK++N +YVKHTG IEKI
Sbjct: 149 ---------------AQEILSLKKRLNEIYVKHTGQPIEKI 174
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDIYSRLL+ERII + GPV
Sbjct: 12 LVPMVVEQTNRGERAYDIYSRLLKERIIFLTGPVE 46
>sp|Q5FFG7|CLPP_EHRRG ATP-dependent Clp protease proteolytic subunit OS=Ehrlichia
ruminantium (strain Gardel) GN=clpP PE=3 SV=1
Length = 198
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 140/221 (63%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+E T RGERAYDIY+RLL+ERII + GPI+D ++S+VVAQL+FL++E+ +K I M
Sbjct: 3 LVPMVVEPTSRGERAYDIYTRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDISM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQYV P IAT C+GQA SM SLLLAAGEKGMR +LPNSRIMI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRIMI 122
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 123 HQPSGGFQ---------------------GQA---------------------------- 133
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI+I A+EI+N+K ++N +YVKHTG + ++
Sbjct: 134 ---------TDIEIHAKEILNIKSRLNYIYVKHTGRELSEV 165
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+E T RGERAYDIY+RLL+ERII + GP+
Sbjct: 3 LVPMVVEPTSRGERAYDIYTRLLKERIIFITGPIE 37
>sp|Q5GS83|CLPP_WOLTR ATP-dependent Clp protease proteolytic subunit OS=Wolbachia sp.
subsp. Brugia malayi (strain TRS) GN=clpP PE=3 SV=1
Length = 208
Score = 211 bits (538), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 141/221 (63%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
L+PIVIEQT RGERAYDIYSRL++ERII V GP++D+++SV+VAQLLFL+SE+ K I+M
Sbjct: 3 LIPIVIEQTSRGERAYDIYSRLVKERIIFVTGPVEDNMASVIVAQLLFLESENPDKDIYM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P ++T C+GQA SM SLLLAAG +G R+SLP+SRIMI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTEGKRYSLPHSRIMI 122
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 123 HQPSGGYQ---------------------GQA---------------------------- 133
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI+I A EI+ +K+++N +Y KHTG S++KI
Sbjct: 134 ---------TDIEIHANEILRVKRKLNQIYEKHTGNSLKKI 165
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
L+PIVIEQT RGERAYDIYSRL++ERII V GPV
Sbjct: 3 LIPIVIEQTSRGERAYDIYSRLVKERIIFVTGPVE 37
>sp|Q3YSQ3|CLPP_EHRCJ ATP-dependent Clp protease proteolytic subunit OS=Ehrlichia canis
(strain Jake) GN=clpP PE=3 SV=1
Length = 200
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 141/221 (63%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDIYSRLL+ERII + GPI+D ++S+VVAQL+FL++E+ +K I M
Sbjct: 3 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLVFLEAENPEKEICM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P ++T C+GQA SM SLLLAAGE GMR++LPNSRIMI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRIMI 122
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 123 HQPSGGFQ---------------------GQA---------------------------- 133
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI+I A+EI+++K ++N +YVKHTG + ++
Sbjct: 134 ---------TDIEIHAKEILDIKSRLNDIYVKHTGRDLPEV 165
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDIYSRLL+ERII + GP+
Sbjct: 3 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIE 37
>sp|Q2GFT8|CLPP_EHRCR ATP-dependent Clp protease proteolytic subunit OS=Ehrlichia
chaffeensis (strain Arkansas) GN=clpP PE=3 SV=1
Length = 199
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 141/221 (63%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDIYSRLL+ERII + GPI+D ++S++VAQL+FL+SE+ +K I M
Sbjct: 3 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLIVAQLIFLESENPEKEICM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P ++T C+GQA SM SLLLAAGE GMR++LPNSRIMI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRIMI 122
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 123 HQPSGGFQ---------------------GQA---------------------------- 133
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI+I A+EI+++K ++N +YVKHTG + ++
Sbjct: 134 ---------TDIEIHAKEILDIKGRLNDIYVKHTGRDLSEV 165
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDIYSRLL+ERII + GP+
Sbjct: 3 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIE 37
>sp|A7ILC6|CLPP_XANP2 ATP-dependent Clp protease proteolytic subunit OS=Xanthobacter
autotrophicus (strain ATCC BAA-1158 / Py2) GN=clpP PE=3
SV=1
Length = 211
Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 139/221 (62%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
L+P+V+EQT RGER+YDI+SRLL+ERII + GP++D +S++ VAQLLFL++++ KK I M
Sbjct: 12 LIPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDGMSTLAVAQLLFLEADNPKKEISM 71
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ P ++T C+GQA SM SLLL AGEK MR +LPN+RIM+
Sbjct: 72 YINSPGGVVTSGLAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGEKDMRFALPNARIMV 131
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQ IM+H
Sbjct: 132 HQPSGGFQ---------------------GQVTD---------------------IMLH- 148
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
A+EI+NLK+++N +YVKHTG S++KI
Sbjct: 149 ---------------AQEILNLKRRLNEIYVKHTGRSMDKI 174
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
L+P+V+EQT RGER+YDI+SRLL+ERII + GPV
Sbjct: 12 LIPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVE 46
>sp|A5EKA8|CLPP_BRASB ATP-dependent Clp protease proteolytic subunit OS=Bradyrhizobium
sp. (strain BTAi1 / ATCC BAA-1182) GN=clpP PE=3 SV=1
Length = 210
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 137/221 (61%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +++++VAQLLFL++E+ KK I M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMATLIVAQLLFLEAENPKKEIAM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQ++ P ++T C GQA SM SLLL AG K MR SLPNSRIM+
Sbjct: 71 YINSPGGVVTSGLAIYDTMQFIRPAVSTLCTGQAASMGSLLLCAGHKDMRFSLPNSRIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI + A+EI++LKK++N +YVKHTG S + I
Sbjct: 142 ---------TDIMLHAQEILSLKKRLNEIYVKHTGQSYKAI 173
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVE 45
>sp|Q2GJB4|CLPP_ANAPZ ATP-dependent Clp protease proteolytic subunit OS=Anaplasma
phagocytophilum (strain HZ) GN=clpP PE=3 SV=1
Length = 197
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 140/224 (62%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQTGRGERAYDIYSRLL+ERII V GPI+D ++S++VAQL+FL++E +K I M
Sbjct: 3 LVPMVVEQTGRGERAYDIYSRLLKERIIFVTGPIEDEMASLIVAQLVFLEAEDPEKDISM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P +AT C+GQA SM SLLL AG GMR +LPNSR+MI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYIKPNVATLCLGQAASMGSLLLCAGAPGMRCALPNSRVMI 122
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG + GQA
Sbjct: 123 HQPSGGFR---------------------GQA---------------------------- 133
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
TDI+I A EI+ +K+++N ++V+HTG S+E+I S
Sbjct: 134 ---------TDIEIHAREILEIKRRLNEIFVRHTGKSLEEIESS 168
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQTGRGERAYDIYSRLL+ERII V GP+
Sbjct: 3 LVPMVVEQTGRGERAYDIYSRLLKERIIFVTGPIE 37
>sp|Q1RJH2|CLPP_RICBR ATP-dependent Clp protease proteolytic subunit OS=Rickettsia bellii
(strain RML369-C) GN=clpP PE=3 SV=2
Length = 227
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 138/223 (61%), Gaps = 58/223 (26%)
Query: 46 VPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMY 105
VPIVIEQT RGERAYDIYSRLL+ERII V GPI+D +++++ AQLLFL++E+ +K I+MY
Sbjct: 26 VPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDIYMY 85
Query: 106 INSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 165
INSPGG VT+GL IYDTMQY+ P +AT C+GQACSM S LL GEKGMR+SLP+SR+MIH
Sbjct: 86 INSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRVMIH 145
Query: 166 QPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQP 225
QPSGG + GQA
Sbjct: 146 QPSGGYR---------------------GQA----------------------------- 155
Query: 226 SGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
TDI+I A+E + +KK +N LY KHTG ++ + KS
Sbjct: 156 --------TDIEIHAQETLKIKKILNSLYSKHTGQDVKHVEKS 190
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 382 VPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
VPIVIEQT RGERAYDIYSRLL+ERII V GP+
Sbjct: 26 VPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIE 59
>sp|B2FQR2|CLPP_STRMK ATP-dependent Clp protease proteolytic subunit OS=Stenotrophomonas
maltophilia (strain K279a) GN=clpP PE=3 SV=1
Length = 208
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 139/225 (61%), Gaps = 58/225 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDIYSRLL+ER+I ++GPIDD +++VVVAQLLFL+SE+ +K I++
Sbjct: 10 LVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLESENPEKDINI 69
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+G+ IYDTMQY+ P ++T C+GQA SM +LLLAAGE G R++LPNSR+MI
Sbjct: 70 YINSPGGVVTAGMAIYDTMQYIKPNVSTTCIGQAASMGALLLAAGEAGKRYALPNSRVMI 129
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQP GG Q GQA
Sbjct: 130 HQPLGGYQ---------------------GQA---------------------------- 140
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
TDI I A EI+ L+ ++N + KHTG S+E I + T
Sbjct: 141 ---------TDIDIHAREILTLRSRLNEVLAKHTGQSLETIARDT 176
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDIYSRLL+ER+I ++GP+
Sbjct: 10 LVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPID 44
>sp|Q88KJ0|CLPP_PSEPK ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain KT2440) GN=clpP PE=3 SV=1
Length = 213
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 139/225 (61%), Gaps = 58/225 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+VIEQ+ RGERAYDIYSRLL+ER+I ++GP++D ++++VVAQLLFL++E+ K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHL 78
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGGSVT+G+ IYDTMQ++ P ++T C+GQACSM + LLAAG KG RH LPNSR+MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMI 138
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQP GG Q GQA
Sbjct: 139 HQPLGGFQ---------------------GQA---------------------------- 149
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
TDI+I A+EI+N+K ++N L HTG +E I + T
Sbjct: 150 ---------TDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDT 185
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVSLY 417
LVP+VIEQ+ RGERAYDIYSRLL+ER+I ++GPV Y
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDY 55
>sp|A5W635|CLPP_PSEP1 ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain F1 / ATCC 700007) GN=clpP PE=3 SV=1
Length = 213
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 139/225 (61%), Gaps = 58/225 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+VIEQ+ RGERAYDIYSRLL+ER+I ++GP++D ++++VVAQLLFL++E+ K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHL 78
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGGSVT+G+ IYDTMQ++ P ++T C+GQACSM + LLAAG KG RH LPNSR+MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMI 138
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQP GG Q GQA
Sbjct: 139 HQPLGGFQ---------------------GQA---------------------------- 149
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
TDI+I A+EI+N+K ++N L HTG +E I + T
Sbjct: 150 ---------TDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDT 185
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVSLY 417
LVP+VIEQ+ RGERAYDIYSRLL+ER+I ++GPV Y
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDY 55
>sp|A8EYM5|CLPP_RICCK ATP-dependent Clp protease proteolytic subunit OS=Rickettsia
canadensis (strain McKiel) GN=clpP PE=3 SV=1
Length = 201
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/223 (49%), Positives = 137/223 (61%), Gaps = 58/223 (26%)
Query: 46 VPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMY 105
VPIVIEQT RGERAYDIYSRLL+ERII V ++D +++++VAQLLFL++E+ KK I+MY
Sbjct: 4 VPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMY 63
Query: 106 INSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 165
INSPGG VT+GL IYDTMQY+ P +AT C+GQACSM S LL GEKGMR+SLP+SRIMIH
Sbjct: 64 INSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRIMIH 123
Query: 166 QPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQP 225
QPSGG Q GQA
Sbjct: 124 QPSGGYQ---------------------GQA----------------------------- 133
Query: 226 SGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
TDI+I A+E + +K+ +N LY KHTG ++ I KS
Sbjct: 134 --------TDIEIHAQETLKIKRLLNELYSKHTGQDVKHIEKS 168
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 27/29 (93%)
Query: 382 VPIVIEQTGRGERAYDIYSRLLRERIICV 410
VPIVIEQT RGERAYDIYSRLL+ERII V
Sbjct: 4 VPIVIEQTSRGERAYDIYSRLLKERIIFV 32
>sp|Q4ULF0|CLPP_RICFE ATP-dependent Clp protease proteolytic subunit OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=clpP PE=3 SV=1
Length = 201
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 138/223 (61%), Gaps = 58/223 (26%)
Query: 46 VPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMY 105
VPIVIEQT RGERAYDIYSRLL+ERII V ++D ++++VVAQLLFL++E+ KK I+MY
Sbjct: 4 VPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLVVAQLLFLEAENPKKDIYMY 63
Query: 106 INSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 165
INSPGG VT+GL IYDTMQY+ P +AT C+GQACSM SLLL GEKGMR+SLP+SRIMIH
Sbjct: 64 INSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIH 123
Query: 166 QPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQP 225
QPSGG + GQA
Sbjct: 124 QPSGGYR---------------------GQA----------------------------- 133
Query: 226 SGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
TDI+I A+E + +K+ +N LY KHTG ++ I KS
Sbjct: 134 --------TDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKS 168
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 27/29 (93%)
Query: 382 VPIVIEQTGRGERAYDIYSRLLRERIICV 410
VPIVIEQT RGERAYDIYSRLL+ERII V
Sbjct: 4 VPIVIEQTSRGERAYDIYSRLLKERIIFV 32
>sp|B1J692|CLPP_PSEPW ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain W619) GN=clpP PE=3 SV=1
Length = 213
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/225 (46%), Positives = 139/225 (61%), Gaps = 58/225 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+VIEQ+ RGERAYDIYSRLL+ER+I ++GP++D ++++VVAQ+LFL++E+ K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIHL 78
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGGSVT+G+ IYDTMQ++ P ++T C+GQACSM + LLAAG KG RH LPNSR+MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMI 138
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQP GG Q GQA
Sbjct: 139 HQPLGGFQ---------------------GQA---------------------------- 149
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
TDI+I A+EI+N+K ++N L HTG +E I + T
Sbjct: 150 ---------TDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDT 185
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVSLY 417
LVP+VIEQ+ RGERAYDIYSRLL+ER+I ++GPV Y
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDY 55
>sp|Q8UFY6|CLPP2_AGRT5 ATP-dependent Clp protease proteolytic subunit 2 OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=clpP2 PE=3 SV=1
Length = 210
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 141/224 (62%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGER+YDI+SRLL+ERII + GP++D ++S+V AQLLFL++E+ KK I +
Sbjct: 11 LVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKEIAL 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+G+ IYDTMQ++ P ++T CVGQA SM SLLLAAGEKGMR + PN+RIM+
Sbjct: 71 YINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
+DI+ A +II +K+++N +YVKHTG ++E++ K+
Sbjct: 142 ---------SDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKT 176
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGER+YDI+SRLL+ERII + GPV
Sbjct: 11 LVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVE 45
>sp|Q5PBD0|CLPP_ANAMM ATP-dependent Clp protease proteolytic subunit OS=Anaplasma
marginale (strain St. Maries) GN=clpP PE=3 SV=1
Length = 215
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 142/224 (63%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDIYSRLL+ERII + G ++D+++S++VAQL+FL++E+ +K I +
Sbjct: 20 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENPEKDISL 79
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P ++T C+GQA SM +LLLA GE GMR++LPNSRIM+
Sbjct: 80 YINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALPNSRIMV 139
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG + GQA
Sbjct: 140 HQPSGGFR---------------------GQA---------------------------- 150
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
TDI+I A EI+ +K+++N +YVKHTG S+E+I S
Sbjct: 151 ---------TDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESS 185
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDIYSRLL+ERII + G V
Sbjct: 20 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVE 54
>sp|B9KHZ4|CLPP_ANAMF ATP-dependent Clp protease proteolytic subunit OS=Anaplasma
marginale (strain Florida) GN=clpP PE=3 SV=1
Length = 215
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 142/224 (63%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDIYSRLL+ERII + G ++D+++S++VAQL+FL++E+ +K I +
Sbjct: 20 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENPEKDISL 79
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P ++T C+GQA SM +LLLA GE GMR++LPNSRIM+
Sbjct: 80 YINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALPNSRIMV 139
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG + GQA
Sbjct: 140 HQPSGGFR---------------------GQA---------------------------- 150
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
TDI+I A EI+ +K+++N +YVKHTG S+E+I S
Sbjct: 151 ---------TDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESS 185
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDIYSRLL+ERII + G V
Sbjct: 20 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVE 54
>sp|Q27539|CLPP1_CAEEL ATP-dependent Clp protease proteolytic subunit 1, mitochondrial
OS=Caenorhabditis elegans GN=clpp-1 PE=1 SV=2
Length = 221
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 111/131 (84%)
Query: 42 SRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKP 101
SR +P VI+ G+GER YDIYSRLLR+RI+C+M P+DD ++S ++AQLLFLQSES KKP
Sbjct: 22 SRVGIPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKP 81
Query: 102 IHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSR 161
IHMYINSPGGSVT+GL IYDT+Q + P++TW +GQA SM SLLL AGEKGMR +LPNSR
Sbjct: 82 IHMYINSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSR 141
Query: 162 IMIHQPSGGVQ 172
IM+HQPSGG Q
Sbjct: 142 IMVHQPSGGAQ 152
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 378 SRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVSLY 417
SR +P VI+ G+GER YDIYSRLLR+RI+C+M PV +
Sbjct: 22 SRVGIPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDF 61
>sp|A6SY74|CLPP_JANMA ATP-dependent Clp protease proteolytic subunit OS=Janthinobacterium
sp. (strain Marseille) GN=clpP PE=3 SV=1
Length = 210
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 139/225 (61%), Gaps = 58/225 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
+VP+VIEQ+GRGERAYDIYSRLL+ERII ++GP++D +++++VAQLLFL+SE+ K I +
Sbjct: 19 MVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKDISL 78
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGGSV++G+ IYDTMQ++ P ++T C G A SM + LLAAGEKG R SLPNSRIMI
Sbjct: 79 YINSPGGSVSAGMAIYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMI 138
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQP GG Q GQA
Sbjct: 139 HQPLGGAQ---------------------GQA---------------------------- 149
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
+DI+IQA EI+ L++++N + + TG S+E+I K T
Sbjct: 150 ---------SDIEIQAREILYLRERLNAILAERTGKSVEEIAKDT 185
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
+VP+VIEQ+GRGERAYDIYSRLL+ERII ++GPV+
Sbjct: 19 MVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVN 53
>sp|Q1GGF6|CLPP_RUEST ATP-dependent Clp protease proteolytic subunit OS=Ruegeria sp.
(strain TM1040) GN=clpP PE=3 SV=2
Length = 210
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 136/231 (58%), Gaps = 58/231 (25%)
Query: 38 SATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSES 97
+ T LVP+V+EQT RGERAYDI+SRLL+ERII + GP+ D +SS++VAQLL L++E+
Sbjct: 5 TETYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAEN 64
Query: 98 SKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSL 157
K I MYINSPGG VTSGL IYDTMQY+ P ++T +GQA SM SLLL AGE GMR SL
Sbjct: 65 PSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSL 124
Query: 158 PNSRIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPN 217
PNSR+M+HQPSGG Q GQA
Sbjct: 125 PNSRVMVHQPSGGYQ---------------------GQA--------------------- 142
Query: 218 SRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
TDI I AEE + LK+++N +YVKHTG + I K+
Sbjct: 143 ----------------TDIMIHAEETLKLKRRLNEIYVKHTGQDYDTIEKA 177
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 374 SATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
+ T LVP+V+EQT RGERAYDI+SRLL+ERII + GPV
Sbjct: 5 TETYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPV 45
>sp|Q73I59|CLPP_WOLPM ATP-dependent Clp protease proteolytic subunit OS=Wolbachia
pipientis wMel GN=clpP PE=3 SV=1
Length = 208
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 137/221 (61%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
L+PIV+EQT RGERAYDIYSRL++ERII V GPI+D+++SV+VAQLLFL+SE+ K I M
Sbjct: 3 LIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPNKDICM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P ++T C+GQA SM SLLLAAG KG R+SLP+SRIMI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRIMI 122
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG GQA +
Sbjct: 123 HQPSGGYH---------------------GQATDI------------------------- 136
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
+I A EI+ +KK++N +Y KHTG S++KI
Sbjct: 137 ------------EIHANEILRVKKKLNQIYEKHTGNSLKKI 165
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
L+PIV+EQT RGERAYDIYSRL++ERII V GP+
Sbjct: 3 LIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIE 37
>sp|C0R2W3|CLPP_WOLWR ATP-dependent Clp protease proteolytic subunit OS=Wolbachia sp.
subsp. Drosophila simulans (strain wRi) GN=clpP PE=3
SV=1
Length = 208
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 137/221 (61%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
L+PIV+EQT RGERAYDIYSRL++ERII V GPI+D+++SV+VAQLLFL+SE+ K I M
Sbjct: 3 LIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPDKDICM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P ++T C+GQA SM SLLLAAG KG R+SLP+SRIMI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRIMI 122
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG GQA +
Sbjct: 123 HQPSGGYH---------------------GQATDI------------------------- 136
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
+I A EI+ +KK++N +Y KHTG S++KI
Sbjct: 137 ------------EIHANEILRVKKKLNQIYEKHTGNSLKKI 165
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
L+PIV+EQT RGERAYDIYSRL++ERII V GP+
Sbjct: 3 LIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIE 37
>sp|B5EI27|CLPP_GEOBB ATP-dependent Clp protease proteolytic subunit OS=Geobacter
bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)
GN=clpP PE=3 SV=1
Length = 199
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 138/231 (59%), Gaps = 58/231 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVPIV+EQTGRGER+YDIYSRLL++RII + G IDD+++++V+AQLLFL++E K IH+
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHL 61
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+G+ IYDTM+Y+ P++T CVGQA SM + LL+ GEKG R+SL NSRIMI
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMI 121
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQP GG Q GQA
Sbjct: 122 HQPLGGFQ---------------------GQA---------------------------- 132
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKSTVCFYVL 275
TDI I A+EI+ +K Q+N L +HTG S+EK+ T Y +
Sbjct: 133 ---------TDIHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFM 174
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVPIV+EQTGRGER+YDIYSRLL++RII + G +
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGID 36
>sp|B0KJG6|CLPP_PSEPG ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain GB-1) GN=clpP PE=3 SV=1
Length = 213
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 138/225 (61%), Gaps = 58/225 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+VIEQ+ RGERAYDIYSRLL+ER+I ++GP++D ++++VVAQ+LFL++E+ K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIHL 78
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGGSVT+G+ IYDTMQ++ P ++T C+GQACSM + LL AG KG RH LPNSR+MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLTAGAKGKRHCLPNSRVMI 138
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQP GG Q GQA
Sbjct: 139 HQPLGGFQ---------------------GQA---------------------------- 149
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
TDIQI A+EI+++K ++N L HTG +E I + T
Sbjct: 150 ---------TDIQIHAQEILSIKARLNELLAYHTGQDLETIQRDT 185
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVSLY 417
LVP+VIEQ+ RGERAYDIYSRLL+ER+I ++GPV Y
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDY 55
>sp|A5D447|CLPP_PELTS ATP-dependent Clp protease proteolytic subunit OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=clpP PE=3 SV=1
Length = 194
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 140/231 (60%), Gaps = 58/231 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVPIV+EQT RGERAYDIYSRLL++RII + GPIDD+ +++++AQ+LFL++E +K I
Sbjct: 3 LVPIVVEQTNRGERAYDIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQF 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+G+ IYDTMQYV P+AT C+GQA SMASLLLAAG KG R+SLP +RI+I
Sbjct: 63 YINSPGGVVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARILI 122
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQP GGVQ GQA
Sbjct: 123 HQPLGGVQ---------------------GQA---------------------------- 133
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKSTVCFYVL 275
TDI+I A+EI+ +++ +N + +HTG IEKI + T Y +
Sbjct: 134 ---------TDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFM 175
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVPIV+EQT RGERAYDIYSRLL++RII + GP+
Sbjct: 3 LVPIVVEQTNRGERAYDIYSRLLKDRIIFLGGPID 37
>sp|A1K783|CLPP_AZOSB ATP-dependent Clp protease proteolytic subunit OS=Azoarcus sp.
(strain BH72) GN=clpP PE=3 SV=1
Length = 212
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 140/225 (62%), Gaps = 58/225 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
L+P+V+EQ+GRGER+YDIYSRLL+ER++ ++GP++D ++++VAQLLFL+SE+ K I+
Sbjct: 19 LIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIYF 78
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGGSVT+GL IYDTMQ++ P ++T C+GQA SM + LLAAGEKG R LPNSR+MI
Sbjct: 79 YINSPGGSVTAGLAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNSRVMI 138
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQP GG Q GQA
Sbjct: 139 HQPLGGFQ---------------------GQA---------------------------- 149
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
+DI+I A EI+ L++++NG+ KHTG +IE+I K T
Sbjct: 150 ---------SDIEIHAREILYLRERLNGMLAKHTGQTIEQIEKDT 185
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 34/35 (97%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
L+P+V+EQ+GRGER+YDIYSRLL+ER++ ++GPV+
Sbjct: 19 LIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVN 53
>sp|A8LJA8|CLPP_DINSH ATP-dependent Clp protease proteolytic subunit OS=Dinoroseobacter
shibae (strain DFL 12) GN=clpP PE=3 SV=1
Length = 208
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 132/221 (59%), Gaps = 58/221 (26%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERI+ V GP+ D +S +VVAQLL L++E+ K I M
Sbjct: 11 LVPMVVEQTSRGERAYDIFSRLLKERIVFVNGPVHDGMSQLVVAQLLHLEAENPSKEISM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQY+ P ++T VGQA SM SLLL AGEKGMR SLPNSRIM+
Sbjct: 71 YINSPGGVVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGEKGMRFSLPNSRIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGYQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
TDI I A+E LK ++N +YVKHTG ++K+
Sbjct: 142 ---------TDIMIHAQETQKLKDRLNQIYVKHTGQPLKKV 173
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
LVP+V+EQT RGERAYDI+SRLL+ERI+ V GPV
Sbjct: 11 LVPMVVEQTSRGERAYDIFSRLLKERIVFVNGPV 44
>sp|C5BTJ0|CLPP_TERTT ATP-dependent Clp protease proteolytic subunit OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=clpP PE=3 SV=1
Length = 214
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 140/233 (60%), Gaps = 58/233 (24%)
Query: 37 HSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSE 96
S T+ LVPIV+EQT RGER+YDIYSRLL+ER+I ++G ++D ++++VVAQLLFL++E
Sbjct: 10 QSTTIQSSLVPIVVEQTARGERSYDIYSRLLKERVIFLVGQVEDHMANLVVAQLLFLEAE 69
Query: 97 SSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHS 156
+ K IH+YINSPGGSVT+G+ IYDTMQ++ P ++T C+GQACSM S LL+AG G R
Sbjct: 70 NPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQACSMGSFLLSAGATGKRFC 129
Query: 157 LPNSRIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLP 216
LPN+R MIHQPSGG Q GQA
Sbjct: 130 LPNARTMIHQPSGGAQ---------------------GQA-------------------- 148
Query: 217 NSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
+DI I A+EI+ ++ ++N + KHTG S+E++ + T
Sbjct: 149 -----------------SDIHIHAQEILKIRARLNEIMAKHTGKSVEEVARDT 184
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 373 HSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
S T+ LVPIV+EQT RGER+YDIYSRLL+ER+I ++G V
Sbjct: 10 QSTTIQSSLVPIVVEQTARGERSYDIYSRLLKERVIFLVGQV 51
>sp|Q8G0I4|CLPP_BRUSU ATP-dependent Clp protease proteolytic subunit OS=Brucella suis
biovar 1 (strain 1330) GN=clpP PE=3 SV=1
Length = 209
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 138/224 (61%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +S +V AQLLFL++E+ KK I+M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSG+ IYDTMQ++ PP++T C+GQA SM SLLL AG G R++LPN+RIM+
Sbjct: 71 YINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
+DI+ A++II +K+++N +YVKHTG + I ++
Sbjct: 142 ---------SDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERT 176
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVE 45
>sp|B0CGR1|CLPP_BRUSI ATP-dependent Clp protease proteolytic subunit OS=Brucella suis
(strain ATCC 23445 / NCTC 10510) GN=clpP PE=3 SV=1
Length = 209
Score = 202 bits (513), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 138/224 (61%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +S +V AQLLFL++E+ KK I+M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSG+ IYDTMQ++ PP++T C+GQA SM SLLL AG G R++LPN+RIM+
Sbjct: 71 YINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
+DI+ A++II +K+++N +YVKHTG + I ++
Sbjct: 142 ---------SDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERT 176
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVE 45
>sp|A9M5C2|CLPP_BRUC2 ATP-dependent Clp protease proteolytic subunit OS=Brucella canis
(strain ATCC 23365 / NCTC 10854) GN=clpP PE=3 SV=1
Length = 209
Score = 202 bits (513), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 138/224 (61%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +S +V AQLLFL++E+ KK I+M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSG+ IYDTMQ++ PP++T C+GQA SM SLLL AG G R++LPN+RIM+
Sbjct: 71 YINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
+DI+ A++II +K+++N +YVKHTG + I ++
Sbjct: 142 ---------SDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERT 176
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVE 45
>sp|Q9L7X6|CLPP_BRUAB ATP-dependent Clp protease proteolytic subunit OS=Brucella abortus
biovar 1 (strain 9-941) GN=clpP PE=3 SV=1
Length = 209
Score = 202 bits (513), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 138/224 (61%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +S +V AQLLFL++E+ KK I+M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSG+ IYDTMQ++ PP++T C+GQA SM SLLL AG G R++LPN+RIM+
Sbjct: 71 YINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
+DI+ A++II +K+++N +YVKHTG + I ++
Sbjct: 142 ---------SDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERT 176
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVE 45
>sp|Q2YPX1|CLPP_BRUA2 ATP-dependent Clp protease proteolytic subunit OS=Brucella abortus
(strain 2308) GN=clpP PE=3 SV=1
Length = 209
Score = 202 bits (513), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 138/224 (61%), Gaps = 58/224 (25%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDI+SRLL+ERII V GP++D +S +V AQLLFL++E+ KK I+M
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINM 70
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSG+ IYDTMQ++ PP++T C+GQA SM SLLL AG G R++LPN+RIM+
Sbjct: 71 YINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMV 130
Query: 165 HQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 224
HQPSGG Q GQA
Sbjct: 131 HQPSGGFQ---------------------GQA---------------------------- 141
Query: 225 PSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
+DI+ A++II +K+++N +YVKHTG + I ++
Sbjct: 142 ---------SDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERT 176
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
LVP+V+EQT RGERAYDI+SRLL+ERII V GPV
Sbjct: 11 LVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVE 45
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,279,224
Number of Sequences: 539616
Number of extensions: 6946910
Number of successful extensions: 22442
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 19806
Number of HSP's gapped (non-prelim): 2467
length of query: 486
length of database: 191,569,459
effective HSP length: 121
effective length of query: 365
effective length of database: 126,275,923
effective search space: 46090711895
effective search space used: 46090711895
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)