Your job contains 1 sequence.
>psy18232
MKKKTTFCVYLEVQSIILCPFIFQGLSLGHLAKTFHHSATLSRPLVPIVIEQTGRGERAY
DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIY
DTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQVGLGIYDT
MQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQA
EEIINLKKQINGLYVKHTGLSIEKIGKSTVCFYVLHDPYICFWINGLYVKHTGLSIEKIG
KSTNLTEELSSVVKVTYITNFHKIGAWFVNYSEATTMKKKTTFCVYLEVQSIILCPFIFQ
GLSLGHLAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVSLYPIT
HSFANDSICKCCHGRRIIRIDGSNDFFLLLCEQLSLDDISCEERSITLLALILALYPYGY
IQIATL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18232
(486 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-7860 - symbol:clpp "ClpP caseinolyti... 603 7.8e-62 2
MGI|MGI:1858213 - symbol:Clpp "ClpP caseinolytic peptidas... 605 5.7e-59 1
UNIPROTKB|Q16740 - symbol:CLPP "Putative ATP-dependent Cl... 601 1.5e-58 1
RGD|1588583 - symbol:Clpp "ClpP caseinolytic peptidase, A... 600 1.9e-58 1
UNIPROTKB|Q2KHU4 - symbol:CLPP "Putative ATP-dependent Cl... 597 4.0e-58 1
UNIPROTKB|F1SBT2 - symbol:CLPP "ATP-dependent Clp proteas... 596 5.1e-58 1
UNIPROTKB|E2QUV8 - symbol:CLPP "ATP-dependent Clp proteas... 545 6.9e-55 2
FB|FBgn0032229 - symbol:CG5045 species:7227 "Drosophila m... 547 8.0e-53 1
WB|WBGene00014172 - symbol:clpp-1 species:6239 "Caenorhab... 504 3.7e-52 2
TIGR_CMR|ECH_0901 - symbol:ECH_0901 "ATP-dependent Clp pr... 488 7.7e-50 2
TAIR|locus:2178282 - symbol:NCLPP7 "nuclear-encoded CLP p... 486 1.3e-49 2
TIGR_CMR|APH_0970 - symbol:APH_0970 "ATP-dependent Clp pr... 474 8.7e-49 2
TIGR_CMR|CPS_3785 - symbol:CPS_3785 "ATP-dependent Clp pr... 445 2.9e-46 2
TIGR_CMR|NSE_0752 - symbol:NSE_0752 "ATP-dependent Clp pr... 450 3.7e-46 2
TIGR_CMR|SPO_1003 - symbol:SPO_1003 "ATP-dependent Clp pr... 458 7.6e-46 2
TIGR_CMR|SO_1794 - symbol:SO_1794 "ATP-dependent Clp prot... 451 1.2e-45 2
TIGR_CMR|CHY_0325 - symbol:CHY_0325 "ATP-dependent Clp pr... 450 1.2e-45 2
TIGR_CMR|VC_1922 - symbol:VC_1922 "ATP-dependent Clp prot... 443 4.1e-45 2
UNIPROTKB|P0A6G7 - symbol:clpP species:83333 "Escherichia... 428 5.9e-44 2
TIGR_CMR|CBU_0738 - symbol:CBU_0738 "ATP-dependent Clp pr... 421 7.6e-44 2
TIGR_CMR|GSU_1792 - symbol:GSU_1792 "ATP-dependent Clp pr... 461 1.0e-43 1
UNIPROTKB|P63786 - symbol:clpP "ATP-dependent Clp proteas... 420 1.8e-42 2
TIGR_CMR|BA_5380 - symbol:BA_5380 "ATP-dependent Clp prot... 439 2.2e-41 1
TIGR_CMR|CJE_0185 - symbol:CJE_0185 "ATP-dependent Clp pr... 407 5.5e-38 1
TIGR_CMR|DET_0710 - symbol:DET_0710 "ATP-dependent Clp pr... 365 1.7e-36 2
UNIPROTKB|G4MLM6 - symbol:MGG_06757 "ATP-dependent Clp pr... 380 4.0e-35 1
TIGR_CMR|BA_2788 - symbol:BA_2788 "ATP-dependent Clp prot... 377 8.3e-35 1
TAIR|locus:2196120 - symbol:CLPP5 "nuclear encoded CLP pr... 336 1.7e-34 2
UNIPROTKB|P63783 - symbol:clpP2 "ATP-dependent Clp protea... 299 3.7e-26 1
UNIPROTKB|P0A526 - symbol:clpP1 "ATP-dependent Clp protea... 289 4.9e-25 1
TAIR|locus:2033344 - symbol:CLPP3 "CLP protease proteolyt... 287 8.2e-25 1
TAIR|locus:2163538 - symbol:CLPP4 "CLP protease P4" speci... 273 3.0e-23 1
TAIR|locus:2034625 - symbol:CLP2 "CLP protease proteolyti... 261 6.4e-22 1
TAIR|locus:2130449 - symbol:CLPR4 "CLP protease R subunit... 228 4.2e-20 2
UNIPROTKB|P0C312 - symbol:clpP "ATP-dependent Clp proteas... 219 2.6e-17 1
UNIPROTKB|P0C313 - symbol:clpP "ATP-dependent Clp proteas... 219 2.6e-17 1
UNIPROTKB|P0C314 - symbol:clpP "ATP-dependent Clp proteas... 219 2.6e-17 1
UNIPROTKB|Q6ENE9 - symbol:clpP "ATP-dependent Clp proteas... 219 2.6e-17 1
UNIPROTKB|Q6E6T0 - symbol:Q6E6T0 "ATP-dependent Clp prote... 211 1.9e-16 1
GENEDB_PFALCIPARUM|PFC0310c - symbol:PFC0310c "ATP-depend... 224 4.9e-16 1
UNIPROTKB|O97252 - symbol:PFC0310c "ATP-dependent CLP pro... 224 4.9e-16 1
GENEDB_PFALCIPARUM|PF14_0348 - symbol:PF14_0348 "ATP-depe... 201 2.4e-15 1
UNIPROTKB|Q8IL98 - symbol:PF14_0348 "ATP-dependent Clp pr... 201 2.4e-15 1
TAIR|locus:2031070 - symbol:CLPR1 "CLP protease proteolyt... 164 4.0e-09 1
TIGR_CMR|SO_2964 - symbol:SO_2964 "ClpP protease family p... 120 0.00017 1
>ZFIN|ZDB-GENE-030131-7860 [details] [associations]
symbol:clpp "ClpP caseinolytic peptidase,
ATP-dependent, proteolytic subunit homolog (E. coli)" species:7955
"Danio rerio" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
ZFIN:ZDB-GENE-030131-7860 GO:GO:0006508 GO:GO:0004252 EMBL:BX649502
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA MEROPS:S14.003 HOVERGEN:HBG001689 IPI:IPI00481150
UniGene:Dr.76726 SMR:Q5PNM4 Ensembl:ENSDART00000006604
Ensembl:ENSDART00000131951 InParanoid:Q5PNM4 Uniprot:Q5PNM4
Length = 266
Score = 603 (217.3 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
Identities = 113/148 (76%), Positives = 131/148 (88%)
Query: 25 GLSLGHLAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSS 84
G+S ++++ H S+ S PL+PIV+EQTGRGERAYDIYSRLLRERIICVMGPIDDS++S
Sbjct: 9 GVSTLRVSRSVHQSSPWSSPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSVAS 68
Query: 85 VVVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASL 144
+V+AQLLFLQSES+ KPIHMYINSPGG VTSGL IYDTMQY+L PI+TWCVGQA SM SL
Sbjct: 69 LVIAQLLFLQSESNNKPIHMYINSPGGVVTSGLAIYDTMQYILNPISTWCVGQAASMGSL 128
Query: 145 LLAAGEKGMRHSLPNSRIMIHQPSGGVQ 172
LLAAG GMRHSLPN+RIM+HQPSGG +
Sbjct: 129 LLAAGTAGMRHSLPNARIMVHQPSGGAR 156
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 80/129 (62%), Positives = 97/129 (75%)
Query: 140 SMASLLLAAGEKGMRHSLPNSR---IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQA 196
S+ASL++A + S N++ + I+ P G V GL IYDTMQY+L PI+TWCVGQA
Sbjct: 65 SVASLVIA--QLLFLQSESNNKPIHMYINSPGGVVTSGLAIYDTMQYILNPISTWCVGQA 122
Query: 197 CSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVK 256
SM SLLLAAG GMRHSLPN+RIM+HQPSGG +GQATDI IQAEEI+ LK+QIN +Y K
Sbjct: 123 ASMGSLLLAAGTAGMRHSLPNARIMVHQPSGGARGQATDIAIQAEEILKLKRQINNIYSK 182
Query: 257 HTGLSIEKI 265
HTG +E I
Sbjct: 183 HTGQLLETI 191
Score = 199 (75.1 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 37/54 (68%), Positives = 46/54 (85%)
Query: 361 GLSLGHLAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
G+S ++++ H S+ S PL+PIV+EQTGRGERAYDIYSRLLRERIICVMGP+
Sbjct: 9 GVSTLRVSRSVHQSSPWSSPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPI 62
Score = 47 (21.6 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 284 INGLYVKHTGLSIEKI 299
IN +Y KHTG +E I
Sbjct: 176 INNIYSKHTGQLLETI 191
>MGI|MGI:1858213 [details] [associations]
symbol:Clpp "ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISA] [GO:0008233 "peptidase
activity" evidence=ISA] [GO:0008236 "serine-type peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 MGI:MGI:1858213
GO:GO:0005739 GO:GO:0005524 GO:GO:0005759 GO:GO:0004252
GO:GO:0006515 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA BRENDA:3.4.21.92 MEROPS:S14.003 CTD:8192
HOVERGEN:HBG001689 OrthoDB:EOG46T32D EMBL:AJ005253 EMBL:AJ012249
EMBL:AJ012250 EMBL:AJ012251 EMBL:AJ012252 EMBL:AJ012253
EMBL:AK004024 EMBL:AK145765 EMBL:AK168053 EMBL:BC001998
IPI:IPI00133270 RefSeq:NP_059089.1 UniGene:Mm.287892
ProteinModelPortal:O88696 SMR:O88696 STRING:O88696
PhosphoSite:O88696 REPRODUCTION-2DPAGE:IPI00133270
REPRODUCTION-2DPAGE:O88696 PaxDb:O88696 PRIDE:O88696
Ensembl:ENSMUST00000002735 GeneID:53895 KEGG:mmu:53895
UCSC:uc008ddm.2 InParanoid:O88696 NextBio:310791 Bgee:O88696
Genevestigator:O88696 GermOnline:ENSMUSG00000002660 Uniprot:O88696
Length = 272
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 114/147 (77%), Positives = 130/147 (88%)
Query: 26 LSLGHLAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSV 85
+S L ++ H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGPIDDS++S+
Sbjct: 35 VSCSPLRRSLHGTATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASL 94
Query: 86 VVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLL 145
V+AQLLFLQSES+KKPIHMYINSPGG VT+GL IYDTMQY+L PI TWCVGQA SM SLL
Sbjct: 95 VIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLL 154
Query: 146 LAAGEKGMRHSLPNSRIMIHQPSGGVQ 172
LAAG GMRHSLPNSRIMIHQPSGG +
Sbjct: 155 LAAGSPGMRHSLPNSRIMIHQPSGGAR 181
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 80/129 (62%), Positives = 94/129 (72%)
Query: 140 SMASLLLAAGEKGMRHSLPNSR---IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQA 196
S+ASL++A + S N + + I+ P G V GL IYDTMQY+L PI TWCVGQA
Sbjct: 90 SVASLVIA--QLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQA 147
Query: 197 CSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVK 256
SM SLLLAAG GMRHSLPNSRIMIHQPSGG +GQATDI IQAEEI+ LKKQ+ +Y K
Sbjct: 148 ASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAK 207
Query: 257 HTGLSIEKI 265
HT S++ I
Sbjct: 208 HTKQSLQVI 216
Score = 195 (73.7 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 36/53 (67%), Positives = 45/53 (84%)
Query: 362 LSLGHLAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
+S L ++ H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGP+
Sbjct: 35 VSCSPLRRSLHGTATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPI 87
>UNIPROTKB|Q16740 [details] [associations]
symbol:CLPP "Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008233 "peptidase
activity" evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0005524 GO:GO:0005759 GO:GO:0006508 GO:GO:0004252
GO:GO:0008233 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA BRENDA:3.4.21.92
MEROPS:S14.003 CTD:8192 HOVERGEN:HBG001689 OrthoDB:EOG46T32D
EMBL:Z50853 EMBL:AK311973 EMBL:BC002956 IPI:IPI00003870 PIR:S68421
RefSeq:NP_006003.1 UniGene:Hs.515092 PDB:1TG6 PDBsum:1TG6
ProteinModelPortal:Q16740 SMR:Q16740 DIP:DIP-50384N IntAct:Q16740
STRING:Q16740 PhosphoSite:Q16740 DMDM:3023512 PaxDb:Q16740
PeptideAtlas:Q16740 PRIDE:Q16740 DNASU:8192 Ensembl:ENST00000245816
GeneID:8192 KEGG:hsa:8192 UCSC:uc002mem.1 GeneCards:GC19P006315
HGNC:HGNC:2084 HPA:HPA010649 MIM:601119 neXtProt:NX_Q16740
PharmGKB:PA26610 InParanoid:Q16740 PhylomeDB:Q16740
EvolutionaryTrace:Q16740 GenomeRNAi:8192 NextBio:30886
ArrayExpress:Q16740 Bgee:Q16740 CleanEx:HS_CLPP
Genevestigator:Q16740 GermOnline:ENSG00000125656 Uniprot:Q16740
Length = 277
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 113/142 (79%), Positives = 127/142 (89%)
Query: 31 LAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQL 90
L + H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGPIDDS++S+V+AQL
Sbjct: 44 LQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQL 103
Query: 91 LFLQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGE 150
LFLQSES+KKPIHMYINSPGG VT+GL IYDTMQY+L PI TWCVGQA SM SLLLAAG
Sbjct: 104 LFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGT 163
Query: 151 KGMRHSLPNSRIMIHQPSGGVQ 172
GMRHSLPNSRIMIHQPSGG +
Sbjct: 164 PGMRHSLPNSRIMIHQPSGGAR 185
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 80/129 (62%), Positives = 94/129 (72%)
Query: 140 SMASLLLAAGEKGMRHSLPNSR---IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQA 196
S+ASL++A + S N + + I+ P G V GL IYDTMQY+L PI TWCVGQA
Sbjct: 94 SVASLVIA--QLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQA 151
Query: 197 CSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVK 256
SM SLLLAAG GMRHSLPNSRIMIHQPSGG +GQATDI IQAEEI+ LKKQ+ +Y K
Sbjct: 152 ASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAK 211
Query: 257 HTGLSIEKI 265
HT S++ I
Sbjct: 212 HTKQSLQVI 220
Score = 192 (72.6 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 367 LAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
L + H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGP+
Sbjct: 44 LQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPI 91
>RGD|1588583 [details] [associations]
symbol:Clpp "ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli)" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] NCBI:XP_001055676 REFSEQ:XM_001055676
Length = 272
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 113/142 (79%), Positives = 126/142 (88%)
Query: 31 LAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQL 90
L H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGPIDDS++S+V+AQL
Sbjct: 40 LRSNLHGTATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQL 99
Query: 91 LFLQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGE 150
LFLQSES+KKPIHMYINSPGG VT+GL IYDTMQY+L PI TWCVGQA SM SLLLAAG
Sbjct: 100 LFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGS 159
Query: 151 KGMRHSLPNSRIMIHQPSGGVQ 172
GMRHSLPNSRIMIHQPSGG +
Sbjct: 160 PGMRHSLPNSRIMIHQPSGGAR 181
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 79/129 (61%), Positives = 94/129 (72%)
Query: 140 SMASLLLAAGEKGMRHSLPNSR---IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQA 196
S+ASL++A + S N + + I+ P G V GL IYDTMQY+L PI TWCVGQA
Sbjct: 90 SVASLVIA--QLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQA 147
Query: 197 CSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVK 256
SM SLLLAAG GMRHSLPNSRIMIHQPSGG +GQATDI IQAEEI+ LK+Q+ +Y K
Sbjct: 148 ASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKRQLYNIYAK 207
Query: 257 HTGLSIEKI 265
HT S++ I
Sbjct: 208 HTKQSLQVI 216
Score = 190 (71.9 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 367 LAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
L H +AT + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGP+
Sbjct: 40 LRSNLHGTATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPI 87
>UNIPROTKB|Q2KHU4 [details] [associations]
symbol:CLPP "Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005759 GO:GO:0006508 GO:GO:0004252 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GeneTree:ENSGT00390000005830 OMA:LVHPPQA EMBL:BC112880
IPI:IPI00700802 RefSeq:NP_001039879.1 UniGene:Bt.54443 HSSP:P0A6G7
ProteinModelPortal:Q2KHU4 SMR:Q2KHU4 STRING:Q2KHU4 MEROPS:S14.003
PRIDE:Q2KHU4 Ensembl:ENSBTAT00000019577 GeneID:535981
KEGG:bta:535981 CTD:8192 HOVERGEN:HBG001689 InParanoid:Q2KHU4
OrthoDB:EOG46T32D NextBio:20876866 Uniprot:Q2KHU4
Length = 272
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 112/140 (80%), Positives = 125/140 (89%)
Query: 33 KTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLF 92
+ H +A + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGPIDDS++S+V+AQLLF
Sbjct: 42 RNLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLF 101
Query: 93 LQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKG 152
LQSES+KKPIHMYINSPGG VTSGL IYDTMQY+L PI TWCVGQA SM SLLLAAG G
Sbjct: 102 LQSESNKKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPG 161
Query: 153 MRHSLPNSRIMIHQPSGGVQ 172
MRHSLPNSRIMIHQPSGG +
Sbjct: 162 MRHSLPNSRIMIHQPSGGAR 181
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 80/129 (62%), Positives = 94/129 (72%)
Query: 140 SMASLLLAAGEKGMRHSLPNSR---IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQA 196
S+ASL++A + S N + + I+ P G V GL IYDTMQY+L PI TWCVGQA
Sbjct: 90 SVASLVIA--QLLFLQSESNKKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQA 147
Query: 197 CSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVK 256
SM SLLLAAG GMRHSLPNSRIMIHQPSGG +GQATDI IQAEEI+ LKKQ+ +Y K
Sbjct: 148 ASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAK 207
Query: 257 HTGLSIEKI 265
HT S++ I
Sbjct: 208 HTKQSLQVI 216
Score = 185 (70.2 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 33/46 (71%), Positives = 40/46 (86%)
Query: 369 KTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
+ H +A + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGP+
Sbjct: 42 RNLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPI 87
>UNIPROTKB|F1SBT2 [details] [associations]
symbol:CLPP "ATP-dependent Clp protease proteolytic
subunit" species:9823 "Sus scrofa" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0006508 GO:GO:0004252 InterPro:IPR023562 PANTHER:PTHR10381
GeneTree:ENSGT00390000005830 OMA:LVHPPQA EMBL:CU929921
EMBL:AEMK01192585 EMBL:FP312741 Ensembl:ENSSSCT00000014789
Uniprot:F1SBT2
Length = 273
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 111/142 (78%), Positives = 127/142 (89%)
Query: 31 LAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQL 90
+ ++ H + + + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGPIDDS++S+V+AQL
Sbjct: 40 MQRSLHATVSRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQL 99
Query: 91 LFLQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGE 150
LFLQSES+KKPIHMYINSPGG VTSGL IYDTMQY+L PI TWCVGQA SM SLLLAAG
Sbjct: 100 LFLQSESNKKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGT 159
Query: 151 KGMRHSLPNSRIMIHQPSGGVQ 172
GMRHSLPNSRIMIHQPSGG +
Sbjct: 160 PGMRHSLPNSRIMIHQPSGGAR 181
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 81/132 (61%), Positives = 96/132 (72%)
Query: 140 SMASLLLAAGEKGMRHSLPNSR---IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQA 196
S+ASL++A + S N + + I+ P G V GL IYDTMQY+L PI TWCVGQA
Sbjct: 90 SVASLVIA--QLLFLQSESNKKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQA 147
Query: 197 CSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVK 256
SM SLLLAAG GMRHSLPNSRIMIHQPSGG +GQATDI IQAEEI+ LKKQ+ +Y K
Sbjct: 148 ASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAK 207
Query: 257 HTGLSIEKIGKS 268
HT S++ I K+
Sbjct: 208 HTKQSLQVIVKA 219
Score = 184 (69.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 32/48 (66%), Positives = 42/48 (87%)
Query: 367 LAKTFHHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
+ ++ H + + + PL+PIV+EQTGRGERAYDIYSRLLRERI+CVMGP+
Sbjct: 40 MQRSLHATVSRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPI 87
>UNIPROTKB|E2QUV8 [details] [associations]
symbol:CLPP "ATP-dependent Clp protease proteolytic
subunit" species:9615 "Canis lupus familiaris" [GO:0006508
"proteolysis" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 InterPro:IPR023562
PANTHER:PTHR10381 GeneTree:ENSGT00390000005830 EMBL:AAEX03012495
Ensembl:ENSCAFT00000029683 OMA:NEESAME NextBio:20897274
Uniprot:E2QUV8
Length = 301
Score = 545 (196.9 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 104/128 (81%), Positives = 115/128 (89%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
L +++ Q GRGERAYDIYSRLLRERI+CVMGPIDDS++S+V+AQLLFLQSES+KKPIHM
Sbjct: 83 LAAVLLPQ-GRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHM 141
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSGL IYDTMQY+L PI TWCVGQA SM SLLLAAG GMRHSLPNSRIMI
Sbjct: 142 YINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMI 201
Query: 165 HQPSGGVQ 172
HQPSGG +
Sbjct: 202 HQPSGGAR 209
Score = 383 (139.9 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 81/129 (62%), Positives = 95/129 (73%)
Query: 140 SMASLLLAAGEKGMRHSLPNSR---IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQA 196
S+ASL++A + S N + + I+ P G V GL IYDTMQY+L PI TWCVGQA
Sbjct: 118 SVASLVIA--QLLFLQSESNKKPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQA 175
Query: 197 CSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVK 256
SM SLLLAAG GMRHSLPNSRIMIHQPSGG +GQATDI IQAEEI+ LKKQ+ G+Y K
Sbjct: 176 ASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYGIYAK 235
Query: 257 HTGLSIEKI 265
HT S++ I
Sbjct: 236 HTKQSLQVI 244
Score = 132 (51.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
L +++ Q GRGERAYDIYSRLLRERI+CVMGP+
Sbjct: 83 LAAVLLPQ-GRGERAYDIYSRLLRERIVCVMGPI 115
Score = 64 (27.6 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 31 LAKTFHHSATLSRPLVPIVIEQTGRGER 58
L ++ H +A + PL+PIV+EQT R R
Sbjct: 40 LQRSLHVTAARALPLIPIVVEQTVRRPR 67
Score = 39 (18.8 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 286 GLYVKHTGLSIEKI 299
G+Y KHT S++ I
Sbjct: 231 GIYAKHTKQSLQVI 244
>FB|FBgn0032229 [details] [associations]
symbol:CG5045 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
EMBL:AE014134 GO:GO:0006508 GO:GO:0004252 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA MEROPS:S14.003 HSSP:P19245 EMBL:AY119497 EMBL:FM245207
RefSeq:NP_609388.1 UniGene:Dm.11171 SMR:Q9VKY3 MINT:MINT-974885
STRING:Q9VKY3 EnsemblMetazoa:FBtr0080000 EnsemblMetazoa:FBtr0332189
GeneID:34402 KEGG:dme:Dmel_CG5045 UCSC:CG5045-RA
FlyBase:FBgn0032229 InParanoid:Q9VKY3 OrthoDB:EOG4VHHP8
GenomeRNAi:34402 NextBio:788329 Uniprot:Q9VKY3
Length = 253
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 103/128 (80%), Positives = 115/128 (89%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
L+P+V+EQTGRGERAYDI+SRLL+ERIIC+MG I D +SS VVAQLLFLQSE+ KPIH+
Sbjct: 29 LIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHL 88
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQYV PPIATWCVGQACSM SLLLAAG GMR+SLPN+RIMI
Sbjct: 89 YINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMI 148
Query: 165 HQPSGGVQ 172
HQPSGG Q
Sbjct: 149 HQPSGGAQ 156
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 72/104 (69%), Positives = 83/104 (79%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G V GL IYDTMQYV PPIATWCVGQACSM SLLLAAG GMR+SLPN+RIM
Sbjct: 88 LYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIM 147
Query: 222 IHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKI 265
IHQPSGG QGQATDI I AEEII +K+Q+ +YVKH + E++
Sbjct: 148 IHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEM 191
Score = 148 (57.2 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 26/35 (74%), Positives = 34/35 (97%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
L+P+V+EQTGRGERAYDI+SRLL+ERIIC+MG ++
Sbjct: 29 LIPMVVEQTGRGERAYDIFSRLLKERIICLMGNIT 63
>WB|WBGene00014172 [details] [associations]
symbol:clpp-1 species:6239 "Caenorhabditis elegans"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0005759 GO:GO:0006508 GO:GO:0010171
GO:GO:0040017 GO:GO:0040018 GO:GO:0004252 GO:GO:0040035
GO:GO:0030163 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
InterPro:IPR023562 PANTHER:PTHR10381 EMBL:Z49073 PIR:C88288
RefSeq:NP_001254239.1 RefSeq:NP_001254240.1 RefSeq:NP_001254241.1
ProteinModelPortal:Q27539 SMR:Q27539 STRING:Q27539 PaxDb:Q27539
EnsemblMetazoa:ZK970.2d GeneID:174594 KEGG:cel:CELE_ZK970.2
CTD:174594 WormBase:ZK970.2a WormBase:ZK970.2b WormBase:ZK970.2d
GeneTree:ENSGT00390000005830 InParanoid:Q27539 OMA:LVHPPQA
BRENDA:3.4.21.92 NextBio:884698 Uniprot:Q27539
Length = 221
Score = 504 (182.5 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 94/136 (69%), Positives = 115/136 (84%)
Query: 38 SATL-SRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSE 96
SA++ SR +P VI+ G+GER YDIYSRLLR+RI+C+M P+DD ++S ++AQLLFLQSE
Sbjct: 17 SASVQSRVGIPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSE 76
Query: 97 SSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHS 156
S KKPIHMYINSPGGSVT+GL IYDT+Q + P++TW +GQA SM SLLL AGEKGMR +
Sbjct: 77 SGKKPIHMYINSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSA 136
Query: 157 LPNSRIMIHQPSGGVQ 172
LPNSRIM+HQPSGG Q
Sbjct: 137 LPNSRIMVHQPSGGAQ 152
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 69/128 (53%), Positives = 90/128 (70%)
Query: 141 MASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMA 200
+A LL E G + P + I+ P G V GL IYDT+Q + P++TW +GQA SM
Sbjct: 67 IAQLLFLQSESGKK---P-IHMYINSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMG 122
Query: 201 SLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGL 260
SLLL AGEKGMR +LPNSRIM+HQPSGG QG +DI I+AEEI LK+++N +YV HTG+
Sbjct: 123 SLLLCAGEKGMRSALPNSRIMVHQPSGGAQGTCSDIVIRAEEITRLKRRLNEIYVHHTGM 182
Query: 261 SIEKIGKS 268
S ++I K+
Sbjct: 183 SYDEIEKT 190
Score = 131 (51.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 374 SATL-SRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
SA++ SR +P VI+ G+GER YDIYSRLLR+RI+C+M PV
Sbjct: 17 SASVQSRVGIPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPV 58
Score = 54 (24.1 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 284 INGLYVKHTGLSIEKIGKSTNLTEELSS 311
+N +YV HTG+S ++I K+ + +S+
Sbjct: 172 LNEIYVHHTGMSYDEIEKTLDRDRFMSA 199
>TIGR_CMR|ECH_0901 [details] [associations]
symbol:ECH_0901 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
ProtClustDB:PRK00277 RefSeq:YP_507695.1 ProteinModelPortal:Q2GFT8
SMR:Q2GFT8 STRING:Q2GFT8 GeneID:3928015 KEGG:ech:ECH_0901
PATRIC:20577202 OMA:RDPVEIF BioCyc:ECHA205920:GJNR-904-MONOMER
Uniprot:Q2GFT8
Length = 199
Score = 488 (176.8 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 92/128 (71%), Positives = 112/128 (87%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDIYSRLL+ERII + GPI+D ++S++VAQL+FL+SE+ +K I M
Sbjct: 3 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLIVAQLIFLESENPEKEICM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P ++T C+GQA SM SLLLAAGE GMR++LPNSRIMI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRIMI 122
Query: 165 HQPSGGVQ 172
HQPSGG Q
Sbjct: 123 HQPSGGFQ 130
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 72/127 (56%), Positives = 93/127 (73%)
Query: 141 MASLLLAAGEKGMRHSLPNSRIM--IHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACS 198
MASL++A + P I I+ P G V GL IYDTMQY+ P ++T C+GQA S
Sbjct: 40 MASLIVAQ-LIFLESENPEKEICMYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAAS 98
Query: 199 MASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHT 258
M SLLLAAGE GMR++LPNSRIMIHQPSGG QGQATDI+I A+EI+++K ++N +YVKHT
Sbjct: 99 MGSLLLAAGEPGMRYALPNSRIMIHQPSGGFQGQATDIEIHAKEILDIKGRLNDIYVKHT 158
Query: 259 GLSIEKI 265
G + ++
Sbjct: 159 GRDLSEV 165
Score = 140 (54.3 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
LVP+V+EQT RGERAYDIYSRLL+ERII + GP+
Sbjct: 3 LVPMVVEQTSRGERAYDIYSRLLKERIIFITGPI 36
Score = 48 (22.0 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 284 INGLYVKHTGLSIEKI 299
+N +YVKHTG + ++
Sbjct: 150 LNDIYVKHTGRDLSEV 165
>TAIR|locus:2178282 [details] [associations]
symbol:NCLPP7 "nuclear-encoded CLP protease P7"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009840
"chloroplastic endopeptidase Clp complex" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0009532 "plastid stroma"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
GO:GO:0006508 EMBL:AB006708 GO:GO:0004252 GO:GO:0050897
GO:GO:0009535 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA EMBL:AK118523
EMBL:BT005261 IPI:IPI00533430 RefSeq:NP_568427.1 UniGene:At.31024
PDB:1R8V PDBsum:1R8V ProteinModelPortal:Q9FN42 SMR:Q9FN42
STRING:Q9FN42 MEROPS:S14.A02 PaxDb:Q9FN42 PRIDE:Q9FN42
EnsemblPlants:AT5G23140.1 GeneID:832378 KEGG:ath:AT5G23140
GeneFarm:805 TAIR:At5g23140 InParanoid:Q9FN42 PhylomeDB:Q9FN42
ProtClustDB:CLSN2917700 Genevestigator:Q9FN42 GO:GO:0009840
Uniprot:Q9FN42
Length = 241
Score = 486 (176.1 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 92/129 (71%), Positives = 109/129 (84%)
Query: 42 SRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKP 101
S L+P+VIE + RGERAYDI+SRLL+ERIIC+ GPI+D S VVVAQLL+L+SE+ KP
Sbjct: 29 SYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKP 88
Query: 102 IHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSR 161
IHMY+NSPGG VT+GL IYDTMQY+ PI+T C+GQA SMASLLLAAG KG R SLPN+
Sbjct: 89 IHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNAT 148
Query: 162 IMIHQPSGG 170
+MIHQPSGG
Sbjct: 149 VMIHQPSGG 157
Score = 312 (114.9 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 59/105 (56%), Positives = 75/105 (71%)
Query: 164 IHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 223
++ P G V GL IYDTMQY+ PI+T C+GQA SMASLLLAAG KG R SLPN+ +MIH
Sbjct: 93 LNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIH 152
Query: 224 QPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
QPSGG GQA DI I ++I+ + +N LYVKHTG ++ + +
Sbjct: 153 QPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANN 197
Score = 139 (54.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 378 SRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPVS 415
S L+P+VIE + RGERAYDI+SRLL+ERIIC+ GP++
Sbjct: 29 SYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIN 66
Score = 48 (22.0 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 284 INGLYVKHTGLSIEKIGKS 302
+N LYVKHTG ++ + +
Sbjct: 179 LNELYVKHTGQPLDVVANN 197
>TIGR_CMR|APH_0970 [details] [associations]
symbol:APH_0970 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000235
GenomeReviews:CP000235_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 RefSeq:YP_505537.1
ProteinModelPortal:Q2GJB4 SMR:Q2GJB4 STRING:Q2GJB4 GeneID:3930516
KEGG:aph:APH_0970 PATRIC:20950656 OMA:ARMNELM
BioCyc:APHA212042:GHPM-982-MONOMER Uniprot:Q2GJB4
Length = 197
Score = 474 (171.9 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 90/126 (71%), Positives = 108/126 (85%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQTGRGERAYDIYSRLL+ERII V GPI+D ++S++VAQL+FL++E +K I M
Sbjct: 3 LVPMVVEQTGRGERAYDIYSRLLKERIIFVTGPIEDEMASLIVAQLVFLEAEDPEKDISM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P +AT C+GQA SM SLLL AG GMR +LPNSR+MI
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYIKPNVATLCLGQAASMGSLLLCAGAPGMRCALPNSRVMI 122
Query: 165 HQPSGG 170
HQPSGG
Sbjct: 123 HQPSGG 128
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 64/105 (60%), Positives = 82/105 (78%)
Query: 164 IHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 223
I+ P G V GL IYDTMQY+ P +AT C+GQA SM SLLL AG GMR +LPNSR+MIH
Sbjct: 64 INSPGGVVTAGLSIYDTMQYIKPNVATLCLGQAASMGSLLLCAGAPGMRCALPNSRVMIH 123
Query: 224 QPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
QPSGG +GQATDI+I A EI+ +K+++N ++V+HTG S+E+I S
Sbjct: 124 QPSGGFRGQATDIEIHAREILEIKRRLNEIFVRHTGKSLEEIESS 168
Score = 147 (56.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 28/34 (82%), Positives = 32/34 (94%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
LVP+V+EQTGRGERAYDIYSRLL+ERII V GP+
Sbjct: 3 LVPMVVEQTGRGERAYDIYSRLLKERIIFVTGPI 36
Score = 52 (23.4 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 284 INGLYVKHTGLSIEKIGKS 302
+N ++V+HTG S+E+I S
Sbjct: 150 LNEIFVRHTGKSLEEIESS 168
>TIGR_CMR|CPS_3785 [details] [associations]
symbol:CPS_3785 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:167879 "Colwellia psychrerythraea 34H"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000083
GenomeReviews:CP000083_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA RefSeq:YP_270452.1
ProteinModelPortal:Q47XL8 SMR:Q47XL8 STRING:Q47XL8 GeneID:3522356
KEGG:cps:CPS_3785 PATRIC:21470483
BioCyc:CPSY167879:GI48-3807-MONOMER Uniprot:Q47XL8
Length = 220
Score = 445 (161.7 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 81/136 (59%), Positives = 112/136 (82%)
Query: 38 SAT-LSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSE 96
SAT + LVP+V+EQT +GER+YDIYSRLL+ER+I + G ++D ++++++AQLLFL+SE
Sbjct: 19 SATGIESALVPMVVEQTAKGERSYDIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESE 78
Query: 97 SSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHS 156
S K I++YINSPGGSVT+G+ IYDTM+++ P I+T C+GQA SM + LL+ GEKG R+
Sbjct: 79 SPDKDIYLYINSPGGSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYC 138
Query: 157 LPNSRIMIHQPSGGVQ 172
LPN+R+MIHQP GG Q
Sbjct: 139 LPNARVMIHQPLGGFQ 154
Score = 315 (115.9 bits), Expect = 5.4e-28, P = 5.4e-28
Identities = 65/153 (42%), Positives = 97/153 (63%)
Query: 120 YDTMQYVLPPIATWCVGQACS-MASLLLAAGEKGMRHSLPNSRIM--IHQPSGGVQVGLG 176
YD +L + GQ MA+L++A + P+ I I+ P G V G+
Sbjct: 42 YDIYSRLLKERVIFLCGQVEDHMANLIIAQ-LLFLESESPDKDIYLYINSPGGSVTAGMA 100
Query: 177 IYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDI 236
IYDTM+++ P I+T C+GQA SM + LL+ GEKG R+ LPN+R+MIHQP GG QGQA+D
Sbjct: 101 IYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVMIHQPLGGFQGQASDF 160
Query: 237 QIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
+I A+EI+ +K ++N L +HTG +++K+ + T
Sbjct: 161 EIHAKEILFIKDKLNKLMAEHTGQTLDKVSQDT 193
Score = 128 (50.1 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 374 SAT-LSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
SAT + LVP+V+EQT +GER+YDIYSRLL+ER+I + G V
Sbjct: 19 SATGIESALVPMVVEQTAKGERSYDIYSRLLKERVIFLCGQV 60
Score = 57 (25.1 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 284 INGLYVKHTGLSIEKIGKSTNLTEELSSVVKVTY 317
+N L +HTG +++K+ + T+ LS+ V Y
Sbjct: 174 LNKLMAEHTGQTLDKVSQDTDRDNFLSAEAAVEY 207
>TIGR_CMR|NSE_0752 [details] [associations]
symbol:NSE_0752 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000237
GenomeReviews:CP000237_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_506627.1 ProteinModelPortal:Q2GD19 SMR:Q2GD19
STRING:Q2GD19 GeneID:3931620 KEGG:nse:NSE_0752 PATRIC:22681509
ProtClustDB:CLSK2527690 BioCyc:NSEN222891:GHFU-763-MONOMER
Uniprot:Q2GD19
Length = 201
Score = 450 (163.5 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 82/128 (64%), Positives = 110/128 (85%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V++QT RGERAYDI+SRLL+ER++ + GPI+D ++S++VAQLLFL++E+ K I M
Sbjct: 3 LVPMVVDQTPRGERAYDIFSRLLKERVVFLTGPIEDGMASLIVAQLLFLEAENPDKDIFM 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VT+GL IYDTMQY+ P ++T CVGQA S ASL+LA+G +G R +LP+SR+M+
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYIKPSVSTVCVGQAASAASLILASGAEGKRFALPHSRVMV 122
Query: 165 HQPSGGVQ 172
HQPSGGV+
Sbjct: 123 HQPSGGVR 130
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 72/149 (48%), Positives = 98/149 (65%)
Query: 120 YDTMQYVLPPIATWCVGQA-CSMASLLLAAGEKGMRHSLPNSRIM--IHQPSGGVQVGLG 176
YD +L + G MASL++A + P+ I I+ P G V GL
Sbjct: 18 YDIFSRLLKERVVFLTGPIEDGMASLIVAQ-LLFLEAENPDKDIFMYINSPGGVVTAGLS 76
Query: 177 IYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDI 236
IYDTMQY+ P ++T CVGQA S ASL+LA+G +G R +LP+SR+M+HQPSGGV+GQATD+
Sbjct: 77 IYDTMQYIKPSVSTVCVGQAASAASLILASGAEGKRFALPHSRVMVHQPSGGVRGQATDM 136
Query: 237 QIQAEEIINLKKQINGLYVKHTGLSIEKI 265
+I +EI+ LK+ IN +Y KHTG +I+KI
Sbjct: 137 EIHVKEILQLKRMINEIYQKHTGETIKKI 165
Score = 127 (49.8 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 22/34 (64%), Positives = 31/34 (91%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
LVP+V++QT RGERAYDI+SRLL+ER++ + GP+
Sbjct: 3 LVPMVVDQTPRGERAYDIFSRLLKERVVFLTGPI 36
Score = 51 (23.0 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 284 INGLYVKHTGLSIEKI 299
IN +Y KHTG +I+KI
Sbjct: 150 INEIYQKHTGETIKKI 165
>TIGR_CMR|SPO_1003 [details] [associations]
symbol:SPO_1003 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009368
"endopeptidase Clp complex" evidence=ISS] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA
ProtClustDB:PRK00277 RefSeq:YP_166255.1 ProteinModelPortal:Q5LUQ0
SMR:Q5LUQ0 GeneID:3193881 KEGG:sil:SPO1003 PATRIC:23375299
Uniprot:Q5LUQ0
Length = 209
Score = 458 (166.3 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 89/133 (66%), Positives = 106/133 (79%)
Query: 40 TLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSK 99
T LVP+V+EQT RGERAYDI+SRLL+ERII + GPI D +S ++VAQLL L++E+
Sbjct: 7 TYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFINGPIHDGMSHLIVAQLLHLEAENPN 66
Query: 100 KPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPN 159
K I +YINSPGG VTSGL IYDTMQY+ P +T +GQA SM S+LLA GEKGMR SLPN
Sbjct: 67 KEISIYINSPGGVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPN 126
Query: 160 SRIMIHQPSGGVQ 172
SRIM+HQPSGG Q
Sbjct: 127 SRIMVHQPSGGYQ 139
Score = 325 (119.5 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 79/174 (45%), Positives = 100/174 (57%)
Query: 101 PIHMYINSPGGSV---TS-GLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHS 156
P+ Y+N+ V TS G YD +L + G S L+ A +
Sbjct: 4 PVDTYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFINGPIHDGMSHLIVAQLLHLEAE 63
Query: 157 LPNSRIMIH--QPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHS 214
PN I I+ P G V GL IYDTMQY+ P +T +GQA SM S+LLA GEKGMR S
Sbjct: 64 NPNKEISIYINSPGGVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFS 123
Query: 215 LPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKS 268
LPNSRIM+HQPSGG QGQA+DI I A E LK ++ +YVKHTG + + + K+
Sbjct: 124 LPNSRIMVHQPSGGYQGQASDIMIHAAETQKLKDRLYDIYVKHTGQTKKAVEKA 177
Score = 137 (53.3 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 376 TLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
T LVP+V+EQT RGERAYDI+SRLL+ERII + GP+
Sbjct: 7 TYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFINGPI 45
Score = 40 (19.1 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 287 LYVKHTGLSIEKIGKS 302
+YVKHTG + + + K+
Sbjct: 162 IYVKHTGQTKKAVEKA 177
>TIGR_CMR|SO_1794 [details] [associations]
symbol:SO_1794 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:211586 "Shewanella oneidensis MR-1"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE014299
GenomeReviews:AE014299_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA ProtClustDB:PRK00277
RefSeq:NP_717403.1 ProteinModelPortal:Q8EG19 SMR:Q8EG19
GeneID:1169567 KEGG:son:SO_1794 PATRIC:23523211 Uniprot:Q8EG19
Length = 202
Score = 451 (163.8 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 82/137 (59%), Positives = 112/137 (81%)
Query: 36 HHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQS 95
H+++ + LVP+VIEQT +GER++DIYSRLL+ERII ++G +++ +++++VAQLLFL+S
Sbjct: 2 HNASDIQSALVPMVIEQTAKGERSFDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLES 61
Query: 96 ESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRH 155
ES K I +YINSPGGSVT+G+ IYDTMQ++ P ++T C+GQA SM + LLA GEKG R
Sbjct: 62 ESPDKDIFLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRF 121
Query: 156 SLPNSRIMIHQPSGGVQ 172
LPNSR+MIHQP GG Q
Sbjct: 122 CLPNSRVMIHQPLGGFQ 138
Score = 318 (117.0 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 66/152 (43%), Positives = 91/152 (59%)
Query: 120 YDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM--IHQPSGGVQVGLGI 177
+D +L + VGQ + L+ A + P+ I I+ P G V G+ I
Sbjct: 26 FDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDIFLYINSPGGSVTAGMAI 85
Query: 178 YDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQ 237
YDTMQ++ P ++T C+GQA SM + LLA GEKG R LPNSR+MIHQP GG QGQA+DI
Sbjct: 86 YDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIA 145
Query: 238 IQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
I A+EI+ +K ++N + HTG +E I + T
Sbjct: 146 IHAQEILGIKNKLNQMLADHTGQPLEVIERDT 177
Score = 134 (52.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 25/43 (58%), Positives = 36/43 (83%)
Query: 372 HHSATLSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
H+++ + LVP+VIEQT +GER++DIYSRLL+ERII ++G V
Sbjct: 2 HNASDIQSALVPMVIEQTAKGERSFDIYSRLLKERIIFLVGQV 44
Score = 45 (20.9 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 284 INGLYVKHTGLSIEKIGKSTNLTEELSSVVKVTY 317
+N + HTG +E I + T+ +S+ V Y
Sbjct: 158 LNQMLADHTGQPLEVIERDTDRDNFMSATQAVEY 191
>TIGR_CMR|CHY_0325 [details] [associations]
symbol:CHY_0325 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
OMA:LVHPPQA ProtClustDB:PRK00277 RefSeq:YP_359188.1
ProteinModelPortal:Q3AF96 SMR:Q3AF96 STRING:Q3AF96 GeneID:3726391
KEGG:chy:CHY_0325 PATRIC:21273821
BioCyc:CHYD246194:GJCN-326-MONOMER Uniprot:Q3AF96
Length = 195
Score = 450 (163.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 83/128 (64%), Positives = 107/128 (83%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVPIVIEQT RGER+YDI+SRLL++R I + GPIDD ++++V+AQ+LFL++E +K IH+
Sbjct: 4 LVPIVIEQTSRGERSYDIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHL 63
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG +T+G+ IYDTMQY+ P ++T C+GQA SM + LLAAG KG R SLP +RIMI
Sbjct: 64 YINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMI 123
Query: 165 HQPSGGVQ 172
HQP GGVQ
Sbjct: 124 HQPLGGVQ 131
Score = 319 (117.4 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 61/108 (56%), Positives = 76/108 (70%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G + G+ IYDTMQY+ P ++T C+GQA SM + LLAAG KG R SLP +RIM
Sbjct: 63 LYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIM 122
Query: 222 IHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
IHQP GGVQGQATDI I A EI+ ++ +N L KHTG EKI + T
Sbjct: 123 IHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDT 170
Score = 126 (49.4 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
LVPIVIEQT RGER+YDI+SRLL++R I + GP+
Sbjct: 4 LVPIVIEQTSRGERSYDIWSRLLKDRTIFIGGPI 37
Score = 46 (21.3 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 284 INGLYVKHTGLSIEKIGKST 303
+N L KHTG EKI + T
Sbjct: 151 LNELLTKHTGQPKEKIERDT 170
>TIGR_CMR|VC_1922 [details] [associations]
symbol:VC_1922 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 PIR:G82139 RefSeq:NP_231556.1
ProteinModelPortal:Q9KQS6 SMR:Q9KQS6 DNASU:2613551 GeneID:2613551
KEGG:vch:VC1922 PATRIC:20082888 Uniprot:Q9KQS6
Length = 200
Score = 443 (161.0 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 81/128 (63%), Positives = 106/128 (82%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGER+YDIYSRLL+ER+I + G ++D ++++VVAQLLFL+SE+ K I +
Sbjct: 8 LVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFL 67
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGGSVT+G+ IYDTMQ++ P ++T C+GQACSM + LLA G G R+ LPNSR+MI
Sbjct: 68 YINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVMI 127
Query: 165 HQPSGGVQ 172
HQP GG Q
Sbjct: 128 HQPLGGFQ 135
Score = 326 (119.8 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 68/152 (44%), Positives = 92/152 (60%)
Query: 120 YDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM--IHQPSGGVQVGLGI 177
YD +L + GQ + L+ A + P+ I I+ P G V G+ I
Sbjct: 23 YDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSI 82
Query: 178 YDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQ 237
YDTMQ++ P ++T C+GQACSM + LLA G G R+ LPNSR+MIHQP GG QGQA+DIQ
Sbjct: 83 YDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQ 142
Query: 238 IQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
I A+EI+ +K ++N L +HTG IE I + T
Sbjct: 143 IHAQEILTIKNKLNRLLAEHTGQPIEVIERDT 174
Score = 127 (49.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
LVP+V+EQT RGER+YDIYSRLL+ER+I + G V
Sbjct: 8 LVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQV 41
Score = 48 (22.0 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 284 INGLYVKHTGLSIEKIGKSTNLTEELSSVVKVTY 317
+N L +HTG IE I + T+ +S+ V Y
Sbjct: 155 LNRLLAEHTGQPIEVIERDTDRDNFMSADQAVEY 188
>UNIPROTKB|P0A6G7 [details] [associations]
symbol:clpP species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009266
"response to temperature stimulus" evidence=EXP] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005524 GO:GO:0016020 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0004252
GO:GO:0008236 GO:GO:0009408 EMBL:U82664 GO:GO:0006515
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 EMBL:J05534 PIR:B36575 RefSeq:NP_414971.1
RefSeq:YP_488729.1 PDB:1TYF PDB:1YG6 PDB:1YG8 PDB:2FZS PDB:3HLN
PDB:3MT6 PDBsum:1TYF PDBsum:1YG6 PDBsum:1YG8 PDBsum:2FZS
PDBsum:3HLN PDBsum:3MT6 ProteinModelPortal:P0A6G7 SMR:P0A6G7
DIP:DIP-31838N IntAct:P0A6G7 SWISS-2DPAGE:P0A6G7 PaxDb:P0A6G7
PRIDE:P0A6G7 EnsemblBacteria:EBESCT00000004586
EnsemblBacteria:EBESCT00000016552 EnsemblBacteria:EBESCT00000232597
GeneID:12931742 GeneID:945082 KEGG:ecj:Y75_p0425 KEGG:eco:b0437
PATRIC:32116027 EchoBASE:EB0156 EcoGene:EG10158
BioCyc:EcoCyc:EG10158-MONOMER BioCyc:ECOL316407:JW0427-MONOMER
BioCyc:MetaCyc:EG10158-MONOMER EvolutionaryTrace:P0A6G7
Genevestigator:P0A6G7 Uniprot:P0A6G7
Length = 207
Score = 428 (155.7 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 76/128 (59%), Positives = 106/128 (82%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+VIEQT RGER++DIYSRLL+ER+I + G ++D +++++VAQ+LFL++E+ +K I++
Sbjct: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG +T+G+ IYDTMQ++ P ++T C+GQA SM + LL AG KG R LPNSR+MI
Sbjct: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135
Query: 165 HQPSGGVQ 172
HQP GG Q
Sbjct: 136 HQPLGGYQ 143
Score = 311 (114.5 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 58/108 (53%), Positives = 77/108 (71%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G + G+ IYDTMQ++ P ++T C+GQA SM + LL AG KG R LPNSR+M
Sbjct: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134
Query: 222 IHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
IHQP GG QGQATDI+I A EI+ +K ++N L HTG S+E+I + T
Sbjct: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
LVP+VIEQT RGER++DIYSRLL+ER+I + G V
Sbjct: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQV 49
Score = 52 (23.4 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 284 INGLYVKHTGLSIEKIGKSTNLTEELSSVVKVTY 317
+N L HTG S+E+I + T LS+ V Y
Sbjct: 163 MNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196
>TIGR_CMR|CBU_0738 [details] [associations]
symbol:CBU_0738 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:227377 "Coxiella burnetii RSA 493"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE016828
GenomeReviews:AE016828_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 OMA:ARMNELM
RefSeq:NP_819764.1 PDB:3Q7H PDBsum:3Q7H ProteinModelPortal:Q83DJ2
SMR:Q83DJ2 GeneID:1208629 KEGG:cbu:CBU_0738 PATRIC:17930167
BioCyc:CBUR227377:GJ7S-735-MONOMER Uniprot:Q83DJ2
Length = 195
Score = 421 (153.3 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 78/132 (59%), Positives = 105/132 (79%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVP+V+EQT RGERAYDIYSRLL++R+I ++G ++D ++++ +AQ+LFL+SE+ K I++
Sbjct: 4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINL 63
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG+VTS + IYDTMQ+V P + T C+GQA S +LLLA G KG RH LP+S +MI
Sbjct: 64 YINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMI 123
Query: 165 HQPSGGVQVGLG 176
HQ GG Q G G
Sbjct: 124 HQVLGGYQ-GQG 134
Score = 303 (111.7 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 70/159 (44%), Positives = 90/159 (56%)
Query: 120 YDTMQYVLPPIATWCVGQACS-MASLLLAAGEKGMRHSLPNSRI--MIHQPSGGVQVGLG 176
YD +L + VGQ MA+L +A + PN I I+ P G V +
Sbjct: 19 YDIYSRLLKDRVIFLVGQVEDHMANLAIAQ-MLFLESENPNKDINLYINSPGGAVTSAMA 77
Query: 177 IYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDI 236
IYDTMQ+V P + T C+GQA S +LLLA G KG RH LP+S +MIHQ GG QGQ TDI
Sbjct: 78 IYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDI 137
Query: 237 QIQAEEIINLKKQINGLYVKHTGLSIEKIGKSTVCFYVL 275
QI A++ + Q+N + KHTG IE++ K T Y L
Sbjct: 138 QIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFL 176
Score = 129 (50.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 24/34 (70%), Positives = 31/34 (91%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
LVP+V+EQT RGERAYDIYSRLL++R+I ++G V
Sbjct: 4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQV 37
Score = 58 (25.5 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 284 INGLYVKHTGLSIEKIGKSTNLTEELSSVVKVTY 317
+N + KHTG IE++ K TN L+ V Y
Sbjct: 151 LNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEY 184
>TIGR_CMR|GSU_1792 [details] [associations]
symbol:GSU_1792 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE017180
GenomeReviews:AE017180_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA ProtClustDB:PRK00277
RefSeq:NP_952842.1 ProteinModelPortal:Q74C82 SMR:Q74C82
GeneID:2686403 KEGG:gsu:GSU1792 PATRIC:22026431
BioCyc:GSUL243231:GH27-1812-MONOMER Uniprot:Q74C82
Length = 199
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 86/128 (67%), Positives = 108/128 (84%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
LVPIV+EQTGRGER+YDIYSRLL++RII + GP+DD ++++V+AQ+LFL++E K IH+
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIHL 61
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGG VTSG+ IYDTMQY+ P++T CVGQA SM +LLL+ GEKG R SL +SRIMI
Sbjct: 62 YINSPGGVVTSGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLKHSRIMI 121
Query: 165 HQPSGGVQ 172
HQP GG Q
Sbjct: 122 HQPLGGFQ 129
Score = 312 (114.9 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 60/108 (55%), Positives = 78/108 (72%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G V G+ IYDTMQY+ P++T CVGQA SM +LLL+ GEKG R SL +SRIM
Sbjct: 61 LYINSPGGVVTSGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLKHSRIM 120
Query: 222 IHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
IHQP GG QGQATDI I A+EI+ LKK++N + ++TG + K+ T
Sbjct: 121 IHQPLGGFQGQATDIHIHAQEILKLKKRLNEILAENTGQQLAKVEADT 168
Score = 140 (54.3 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
LVPIV+EQTGRGER+YDIYSRLL++RII + GPV
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGPV 35
>UNIPROTKB|P63786 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:196620 "Staphylococcus aureus subsp. aureus MW2"
[GO:0042802 "identical protein binding" evidence=IPI]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 MEROPS:S14.001
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 EMBL:BA000033 RefSeq:NP_645547.1 PDB:3ST9
PDB:3STA PDBsum:3ST9 PDBsum:3STA ProteinModelPortal:P63786
SMR:P63786 STRING:P63786 EnsemblBacteria:EBSTAT00000026409
GeneID:1002841 GenomeReviews:BA000033_GR KEGG:sam:MW0730
PATRIC:19568014 BioCyc:SAUR196620:GJ9Z-751-MONOMER BindingDB:P63786
EvolutionaryTrace:P63786 Uniprot:P63786
Length = 195
Score = 420 (152.9 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 78/128 (60%), Positives = 102/128 (79%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
L+P VIE T RGERAYDIYSRLL++RII + IDD++++ +V+QLLFLQ++ S+K I++
Sbjct: 3 LIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYL 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGGSVT+G IYDT+Q++ P + T C+G A SM S LLAAG KG R +LPN+ +MI
Sbjct: 63 YINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMI 122
Query: 165 HQPSGGVQ 172
HQP GG Q
Sbjct: 123 HQPLGGAQ 130
Score = 294 (108.6 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 55/108 (50%), Positives = 74/108 (68%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G V G IYDT+Q++ P + T C+G A SM S LLAAG KG R +LPN+ +M
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 222 IHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
IHQP GG QGQAT+I+I A I+ ++++N + + TG SIEKI K T
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDT 169
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 22/28 (78%), Positives = 25/28 (89%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERII 408
L+P VIE T RGERAYDIYSRLL++RII
Sbjct: 3 LIPTVIETTNRGERAYDIYSRLLKDRII 30
Score = 46 (21.3 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 284 INGLYVKHTGLSIEKIGKSTN 304
+N + + TG SIEKI K T+
Sbjct: 150 LNRILSERTGQSIEKIQKDTD 170
>TIGR_CMR|BA_5380 [details] [associations]
symbol:BA_5380 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
OMA:LVHPPQA ProtClustDB:PRK00277 RefSeq:NP_847553.1
RefSeq:YP_022039.1 RefSeq:YP_031239.1 ProteinModelPortal:Q81X63
SMR:Q81X63 IntAct:Q81X63 DNASU:1084924
EnsemblBacteria:EBBACT00000008224 EnsemblBacteria:EBBACT00000015397
EnsemblBacteria:EBBACT00000024106 GeneID:1084924 GeneID:2818633
GeneID:2848145 KEGG:ban:BA_5380 KEGG:bar:GBAA_5380 KEGG:bat:BAS5000
BioCyc:BANT260799:GJAJ-5075-MONOMER
BioCyc:BANT261594:GJ7F-5251-MONOMER Uniprot:Q81X63
Length = 193
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 80/128 (62%), Positives = 105/128 (82%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
L+P VIEQT RGERAYDIYSRLL++RII + IDD++++ +V+QLLFL+S+ +K IH+
Sbjct: 3 LIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHI 62
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YINSPGGS+T+G+ IYDTMQ++ P ++T C+G A SM + LLAAGEKG R++LPNS MI
Sbjct: 63 YINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEAMI 122
Query: 165 HQPSGGVQ 172
HQP GG Q
Sbjct: 123 HQPLGGAQ 130
Score = 293 (108.2 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 53/108 (49%), Positives = 76/108 (70%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
I I+ P G + G+ IYDTMQ++ P ++T C+G A SM + LLAAGEKG R++LPNS M
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEAM 121
Query: 222 IHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
IHQP GG QGQAT+I+I A+ I+ L++++N + TG +E + + T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDT 169
Score = 119 (46.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 381 LVPIVIEQTGRGERAYDIYSRLLRERII 408
L+P VIEQT RGERAYDIYSRLL++RII
Sbjct: 3 LIPTVIEQTNRGERAYDIYSRLLKDRII 30
>TIGR_CMR|CJE_0185 [details] [associations]
symbol:CJE_0185 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:195099 "Campylobacter jejuni RM1221"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000025
GenomeReviews:CP000025_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 OMA:ERDYWMD
RefSeq:YP_178209.1 ProteinModelPortal:Q5HWX6 SMR:Q5HWX6
STRING:Q5HWX6 GeneID:3230948 KEGG:cjr:CJE0185 PATRIC:20042079
BioCyc:CJEJ195099:GJC0-190-MONOMER Uniprot:Q5HWX6
Length = 194
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 75/127 (59%), Positives = 98/127 (77%)
Query: 46 VPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMY 105
+P VIE++ RGER+YDIYSRLL++RII + G I D L++ +VAQLLFL++E K I++Y
Sbjct: 3 IPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLY 62
Query: 106 INSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 165
INSPGG +TSG IYDTM Y+ P + T C+GQA SM + LL+ G +G R +LPNSRIMIH
Sbjct: 63 INSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIH 122
Query: 166 QPSGGVQ 172
QP GG +
Sbjct: 123 QPLGGAR 129
Score = 298 (110.0 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 56/108 (51%), Positives = 74/108 (68%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G + G IYDTM Y+ P + T C+GQA SM + LL+ G +G R +LPNSRIM
Sbjct: 61 LYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIM 120
Query: 222 IHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
IHQP GG +GQATDI+IQA+EI+ LK +N + K+T + KI K T
Sbjct: 121 IHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDT 168
Score = 111 (44.1 bits), Expect = 0.00055, P = 0.00055
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 382 VPIVIEQTGRGERAYDIYSRLLRERIICVMGPV 414
+P VIE++ RGER+YDIYSRLL++RII + G +
Sbjct: 3 IPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEI 35
>TIGR_CMR|DET_0710 [details] [associations]
symbol:DET_0710 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000027
GenomeReviews:CP000027_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
ProtClustDB:PRK00277 OMA:ERDYWMD RefSeq:YP_181451.1
ProteinModelPortal:Q3Z8J8 SMR:Q3Z8J8 STRING:Q3Z8J8 GeneID:3229949
KEGG:det:DET0710 PATRIC:21608483 BioCyc:DETH243164:GJNF-711-MONOMER
Uniprot:Q3Z8J8
Length = 200
Score = 365 (133.5 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 70/128 (54%), Positives = 97/128 (75%)
Query: 45 LVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHM 104
+VP+VIE + RGERA+DIYS LL+ERII + I+D ++++V+AQLLFL E K I +
Sbjct: 7 VVPMVIESSARGERAFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISL 66
Query: 105 YINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMI 164
YI+SPGG +++GL +YDTMQ + P ++T CVG A SMA++LL AG KG R++LPN+ I +
Sbjct: 67 YIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIHM 126
Query: 165 HQPSGGVQ 172
HQ GG Q
Sbjct: 127 HQAMGGAQ 134
Score = 282 (104.3 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 61/143 (42%), Positives = 85/143 (59%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ IH P G + GL +YDTMQ + P ++T CVG A SMA++LL AG KG R++LPN+ I
Sbjct: 66 LYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIH 125
Query: 222 IHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKSTVCFYVLHDPYIC 281
+HQ GG QGQA+DI+I A EI+ + + + VKHTG +EKI +HD
Sbjct: 126 MHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQPMEKI---------IHDSDRD 176
Query: 282 FWINGLYVKHTGLSIEKIGKSTN 304
+++N GL E + K N
Sbjct: 177 YYLNAQQAVEYGLIDEILQKPEN 199
Score = 44 (20.5 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 284 INGLYVKHTGLSIEKIGKSTNLTEELSSVVKVTY 317
+ + VKHTG +EKI ++ L++ V Y
Sbjct: 154 LRNILVKHTGQPMEKIIHDSDRDYYLNAQQAVEY 187
>UNIPROTKB|G4MLM6 [details] [associations]
symbol:MGG_06757 "ATP-dependent Clp protease proteolytic
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 EMBL:CM001231
MEROPS:S14.001 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:XP_003709471.1 ProteinModelPortal:G4MLM6
EnsemblFungi:MGG_06757T0 GeneID:2684930 KEGG:mgr:MGG_06757
Uniprot:G4MLM6
Length = 274
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 76/148 (51%), Positives = 103/148 (69%)
Query: 26 LSLGHLAKTFHHSATLSRPL-VPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSS 84
L+L + A++F HS + +P+V E T G R DI+S+LL+ERI+C+ GPIDD +
Sbjct: 29 LNLSN-ARSFSHSRPPQAGVPMPLVTEVTAGGWRTSDIFSKLLQERIVCLNGPIDDWTQA 87
Query: 85 VVVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASL 144
V AQLL+L+ +S KPI +YINSPGG V+SGL IYDTM Y+ P+ T CVG A SM ++
Sbjct: 88 SVTAQLLWLEQDSPHKPITLYINSPGGQVSSGLAIYDTMNYISSPVHTVCVGMAASMGAI 147
Query: 145 LLAAGEKGMRHSLPNSRIMIHQPSGGVQ 172
LL G G R++LP+S+IM+HQP G Q
Sbjct: 148 LLLGGAAGQRYALPHSQIMVHQPLGSTQ 175
Score = 264 (98.0 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 63/154 (40%), Positives = 86/154 (55%)
Query: 129 PIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQVGLGIYDTMQYVLPPI 188
PI W QA A LL E+ H P + + I+ P G V GL IYDTM Y+ P+
Sbjct: 80 PIDDWT--QASVTAQLLWL--EQDSPHK-PIT-LYINSPGGQVSSGLAIYDTMNYISSPV 133
Query: 189 ATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKK 248
T CVG A SM ++LL G G R++LP+S+IM+HQP G QGQA+DI I A++I ++
Sbjct: 134 HTVCVGMAASMGAILLLGGAAGQRYALPHSQIMVHQPLGSTQGQASDIIIYAKQITRIRS 193
Query: 249 QINGLYVKH--TGLSIEKIGKSTVCFYVLHDPYI 280
QIN + +H T E+ V + D Y+
Sbjct: 194 QINDIMRRHLNTAAGRERFAAQEVDEMMERDKYL 227
>TIGR_CMR|BA_2788 [details] [associations]
symbol:BA_2788 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 RefSeq:NP_845137.1 RefSeq:YP_019430.1
RefSeq:YP_028858.1 ProteinModelPortal:Q81PL4 SMR:Q81PL4
MEROPS:S14.001 DNASU:1086459 EnsemblBacteria:EBBACT00000008369
EnsemblBacteria:EBBACT00000015150 EnsemblBacteria:EBBACT00000020004
GeneID:1086459 GeneID:2817074 GeneID:2849926 KEGG:ban:BA_2788
KEGG:bar:GBAA_2788 KEGG:bat:BAS2599 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 OMA:DIVTICI ProtClustDB:CLSK916804
BioCyc:BANT260799:GJAJ-2663-MONOMER
BioCyc:BANT261594:GJ7F-2758-MONOMER InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 Uniprot:Q81PL4
Length = 193
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 72/127 (56%), Positives = 94/127 (74%)
Query: 46 VPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMY 105
+P V+EQT GER+YDIYSRLL++RI+ + I+D ++S VVAQLLFL++E ++K I +Y
Sbjct: 4 IPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLY 63
Query: 106 INSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 165
INSPGGS T+G I DTM + P + T C+G A S +LLL +G KG R +LPNS IMIH
Sbjct: 64 INSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIH 123
Query: 166 QPSGGVQ 172
QP GG Q
Sbjct: 124 QPLGGAQ 130
Score = 262 (97.3 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 51/108 (47%), Positives = 67/108 (62%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G G I DTM + P + T C+G A S +LLL +G KG R +LPNS IM
Sbjct: 62 LYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIM 121
Query: 222 IHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
IHQP GG QGQAT+I+I A+ I+ LK IN + + TG IE++ T
Sbjct: 122 IHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDT 169
>TAIR|locus:2196120 [details] [associations]
symbol:CLPP5 "nuclear encoded CLP protease 5"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006508
GO:GO:0009941 GO:GO:0004252 EMBL:AC022521 GO:GO:0009534
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022326 EMBL:AJ012278
EMBL:BT024859 EMBL:AY084394 IPI:IPI00546407 PIR:T52455
RefSeq:NP_563657.1 UniGene:At.21093 PDB:1R92 PDBsum:1R92
ProteinModelPortal:Q9S834 SMR:Q9S834 IntAct:Q9S834 STRING:Q9S834
MEROPS:S14.A01 PaxDb:Q9S834 PRIDE:Q9S834 ProMEX:Q9S834
EnsemblPlants:AT1G02560.1 GeneID:839433 KEGG:ath:AT1G02560
GeneFarm:806 TAIR:At1g02560 InParanoid:Q9S834 OMA:QGLGMVP
PhylomeDB:Q9S834 ProtClustDB:CLSN2687625 Genevestigator:Q9S834
Uniprot:Q9S834
Length = 298
Score = 336 (123.3 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 65/118 (55%), Positives = 87/118 (73%)
Query: 57 ERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPGGSVTSG 116
ER I S+L + RII G +DD +++++VAQLL+L + K I MY+NSPGGSVT+G
Sbjct: 110 ERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAG 169
Query: 117 LGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQVG 174
+ I+DTM+++ P ++T CVG A SM + LL+AG KG R+SLPNSRIMIHQP GG Q G
Sbjct: 170 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGG 227
Score = 305 (112.4 bits), Expect = 7.6e-27, P = 7.6e-27
Identities = 57/106 (53%), Positives = 75/106 (70%)
Query: 164 IHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 223
++ P G V G+ I+DTM+++ P ++T CVG A SM + LL+AG KG R+SLPNSRIMIH
Sbjct: 159 VNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIH 218
Query: 224 QPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
QP GG QG TDI IQA E+++ K +NG HTG S+EKI + T
Sbjct: 219 QPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDT 264
Score = 54 (24.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 284 INGLYVKHTGLSIEKIGKSTN 304
+NG HTG S+EKI + T+
Sbjct: 245 LNGYLAYHTGQSLEKINQDTD 265
>UNIPROTKB|P63783 [details] [associations]
symbol:clpP2 "ATP-dependent Clp protease proteolytic
subunit 2" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006508 GO:GO:0004252 EMBL:BX842579 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
BRENDA:3.4.21.92 PIR:C70865 RefSeq:NP_216976.1 RefSeq:NP_337021.1
RefSeq:YP_006515897.1 ProteinModelPortal:P63783 SMR:P63783
IntAct:P63783 MEROPS:S14.009 PRIDE:P63783
EnsemblBacteria:EBMYCT00000002187 EnsemblBacteria:EBMYCT00000071970
GeneID:13319170 GeneID:888174 GeneID:925797 KEGG:mtc:MT2535
KEGG:mtu:Rv2460c KEGG:mtv:RVBD_2460c PATRIC:18127328
TubercuList:Rv2460c OMA:IQGQVSD ProtClustDB:PRK12553 Uniprot:P63783
Length = 214
Score = 299 (110.3 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 65/134 (48%), Positives = 90/134 (67%)
Query: 42 SRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKP 101
+R ++P IE + G + + Y++L ERII + +DD+ ++ ++AQLL L+S +
Sbjct: 12 ARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRD 71
Query: 102 IHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSR 161
I MYINSPGG TS + IYDTMQYV I T C+GQA S A++LLAAG G R +LPN+R
Sbjct: 72 ITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNAR 131
Query: 162 IMIHQPS-GGVQVG 174
++IHQPS GV G
Sbjct: 132 VLIHQPSLSGVIQG 145
Score = 243 (90.6 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 52/108 (48%), Positives = 69/108 (63%)
Query: 164 IHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIH 223
I+ P GG + IYDTMQYV I T C+GQA S A++LLAAG G R +LPN+R++IH
Sbjct: 76 INSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIH 135
Query: 224 QPS--GGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
QPS G +QGQ +D++IQA EI ++ + +HTG I K T
Sbjct: 136 QPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDT 183
>UNIPROTKB|P0A526 [details] [associations]
symbol:clpP1 "ATP-dependent Clp protease proteolytic
subunit 1" species:1773 "Mycobacterium tuberculosis" [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006508 GO:GO:0004252 EMBL:BX842579
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 PIR:D70865 RefSeq:NP_337022.1
RefSeq:YP_006515898.1 RefSeq:YP_177883.1 PDB:2C8T PDB:2CBY PDB:2CE3
PDBsum:2C8T PDBsum:2CBY PDBsum:2CE3 ProteinModelPortal:P0A526
SMR:P0A526 MEROPS:S14.008 PhosSite:P12071649 PRIDE:P0A526
EnsemblBacteria:EBMYCT00000001586 EnsemblBacteria:EBMYCT00000071224
GeneID:13319171 GeneID:888176 GeneID:925798 KEGG:mtc:MT2536
KEGG:mtu:Rv2461c KEGG:mtv:RVBD_2461c PATRIC:18127330
TubercuList:Rv2461c OMA:DPTRDIS ProtClustDB:PRK00277
EvolutionaryTrace:P0A526 Uniprot:P0A526
Length = 200
Score = 289 (106.8 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 58/112 (51%), Positives = 82/112 (73%)
Query: 62 IYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIYD 121
+Y RLL ERII + ++D +++ + AQ+L L +E + K I +YINSPGGS+++G+ IYD
Sbjct: 20 VYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYD 79
Query: 122 TMQYVLPP--IATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGV 171
TM VL P IAT+ +G A SM LLAAG KG R++LP++RI++HQP GGV
Sbjct: 80 TM--VLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV 129
Score = 256 (95.2 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 58/126 (46%), Positives = 79/126 (62%)
Query: 142 ASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQVGLGIYDTMQYVLPP--IATWCVGQACSM 199
A +LL A E + + + I+ P G + G+ IYDTM VL P IAT+ +G A SM
Sbjct: 46 AQILLLAAEDASK----DISLYINSPGGSISAGMAIYDTM--VLAPCDIATYAMGMAASM 99
Query: 200 ASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTG 259
LLAAG KG R++LP++RI++HQP GGV G A DI IQAE+ +KK++ L + TG
Sbjct: 100 GEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTG 159
Query: 260 LSIEKI 265
IE+I
Sbjct: 160 QPIERI 165
>TAIR|locus:2033344 [details] [associations]
symbol:CLPP3 "CLP protease proteolytic subunit 3"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009534 EMBL:AC013288 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0009840 EMBL:AF032123 EMBL:AB022328 EMBL:AC079285
EMBL:AF370528 EMBL:AY072526 EMBL:AY087349 IPI:IPI00538968
PIR:T52041 PIR:T52453 RefSeq:NP_564880.1 UniGene:At.21167 PDB:1R90
PDBsum:1R90 ProteinModelPortal:Q9SXJ6 SMR:Q9SXJ6 IntAct:Q9SXJ6
STRING:Q9SXJ6 MEROPS:S14.A03 PaxDb:Q9SXJ6 PRIDE:Q9SXJ6
ProMEX:Q9SXJ6 EnsemblPlants:AT1G66670.1 GeneID:842985
KEGG:ath:AT1G66670 GeneFarm:804 TAIR:At1g66670 InParanoid:Q9SXJ6
OMA:NMLLRQR PhylomeDB:Q9SXJ6 ProtClustDB:CLSN2689048
Genevestigator:Q9SXJ6 Uniprot:Q9SXJ6
Length = 309
Score = 287 (106.1 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 52/109 (47%), Positives = 79/109 (72%)
Query: 61 DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIY 120
D + LLR+RI+ + +DD + +V++QLL L +E S++ I ++INSPGGS+T+G+GIY
Sbjct: 85 DTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIY 144
Query: 121 DTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSG 169
D M+ ++T C+G A SM + LLA+G KG R+ +PNS++MIHQP G
Sbjct: 145 DAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLG 193
Score = 225 (84.3 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 47/129 (36%), Positives = 76/129 (58%)
Query: 141 MASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMA 200
++ LLL E R + + I+ P G + G+GIYD M+ ++T C+G A SM
Sbjct: 111 ISQLLLLDAEDSER----DITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMG 166
Query: 201 SLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGL 260
+ LLA+G KG R+ +PNS++MIHQP G G+AT++ I+ E++ K ++N ++ + TG
Sbjct: 167 AFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGK 226
Query: 261 SIEKIGKST 269
+I T
Sbjct: 227 PESEIESDT 235
>TAIR|locus:2163538 [details] [associations]
symbol:CLPP4 "CLP protease P4" species:3702 "Arabidopsis
thaliana" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009840 "chloroplastic endopeptidase Clp complex"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009532 "plastid stroma" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009658 GO:GO:0048510 GO:GO:0009535
eggNOG:COG0740 HOGENOM:HOG000285833 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022329 EMBL:AJ000930
EMBL:AB018113 EMBL:AY042832 EMBL:BT006321 EMBL:AY087717
IPI:IPI00548920 PIR:T52452 RefSeq:NP_568644.1 UniGene:At.387
UniGene:At.67124 PDB:1R91 PDBsum:1R91 ProteinModelPortal:Q94B60
SMR:Q94B60 IntAct:Q94B60 STRING:Q94B60 MEROPS:S14.010 PaxDb:Q94B60
PRIDE:Q94B60 EnsemblPlants:AT5G45390.1 GeneID:834575
KEGG:ath:AT5G45390 GeneFarm:801 TAIR:At5g45390 InParanoid:Q94B60
OMA:ERDYWMD PhylomeDB:Q94B60 ProtClustDB:CLSN2689933
Genevestigator:Q94B60 Uniprot:Q94B60
Length = 292
Score = 273 (101.2 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 55/120 (45%), Positives = 81/120 (67%)
Query: 51 EQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPG 110
E RG + D+ LLRERI+ + IDD ++ +++QLL L ++ KK I ++INSPG
Sbjct: 70 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 128
Query: 111 GSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGG 170
GS+++ + IYD +Q V ++T +G A S AS++L AG KG R ++PN+RIMIHQP GG
Sbjct: 129 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 188
Score = 233 (87.1 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 44/107 (41%), Positives = 68/107 (63%)
Query: 161 RIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRI 220
++ I+ P G + + IYD +Q V ++T +G A S AS++L AG KG R ++PN+RI
Sbjct: 121 KLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRI 180
Query: 221 MIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGK 267
MIHQP GG GQA D++IQA+E+++ K + + T S E++ K
Sbjct: 181 MIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLK 227
>TAIR|locus:2034625 [details] [associations]
symbol:CLP2 "CLP protease proteolytic subunit 2"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA]
[GO:0009658 "chloroplast organization" evidence=IMP] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009658 GO:GO:0009534 GO:GO:0010287
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022327 EMBL:AC025416
EMBL:AY057617 EMBL:AY062770 EMBL:AY081641 IPI:IPI00516669
PIR:T52454 RefSeq:NP_563907.1 UniGene:At.20902 PDB:1R97 PDBsum:1R97
ProteinModelPortal:Q9XJ36 SMR:Q9XJ36 IntAct:Q9XJ36 STRING:Q9XJ36
PaxDb:Q9XJ36 PRIDE:Q9XJ36 ProMEX:Q9XJ36 EnsemblPlants:AT1G12410.1
GeneID:837797 KEGG:ath:AT1G12410 GeneFarm:808 TAIR:At1g12410
InParanoid:Q9XJ36 OMA:IWNALYR PhylomeDB:Q9XJ36
ProtClustDB:CLSN2687781 Genevestigator:Q9XJ36 Uniprot:Q9XJ36
Length = 279
Score = 261 (96.9 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 53/132 (40%), Positives = 81/132 (61%)
Query: 41 LSRPLVPIVIEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKK 100
+ P VP + G + DI++ L RER+I + ID+ S+ ++A +L+L + +
Sbjct: 70 IGTPRVPYRNREEGTWQWV-DIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSR 128
Query: 101 PIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNS 160
I+MY+N PGG +T L IYDTM+ + P+ T CVG A ++A LLAAGEKG R ++P S
Sbjct: 129 RIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLS 188
Query: 161 RIMIHQPSGGVQ 172
RI + P+G +
Sbjct: 189 RIALQSPAGAAR 200
Score = 215 (80.7 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 46/115 (40%), Positives = 71/115 (61%)
Query: 156 SLPNSR---IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMR 212
+L +SR + ++ P G + L IYDTM+ + P+ T CVG A ++A LLAAGEKG R
Sbjct: 123 TLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHR 182
Query: 213 HSLPNSRIMIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGK 267
++P SRI + P+G +GQA DIQ +A+E+ ++ + K+TG E++ K
Sbjct: 183 FAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFK 237
>TAIR|locus:2130449 [details] [associations]
symbol:CLPR4 "CLP protease R subunit 4" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0000302 "response to reactive oxygen species" evidence=IMP]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0009627 "systemic acquired resistance" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR001907 PRINTS:PR00127
Pfam:PF00574 GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004252 GO:GO:0000302
GO:GO:0010468 EMBL:Z97342 EMBL:AL161545 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
EMBL:AK117499 EMBL:AY081275 EMBL:BT000050 EMBL:AY087492
IPI:IPI00525806 PIR:G71438 RefSeq:NP_567521.1 UniGene:At.19677
PDB:1R99 PDBsum:1R99 ProteinModelPortal:Q8LB10 SMR:Q8LB10
IntAct:Q8LB10 STRING:Q8LB10 PaxDb:Q8LB10 PRIDE:Q8LB10 ProMEX:Q8LB10
EnsemblPlants:AT4G17040.1 GeneID:827412 KEGG:ath:AT4G17040
GeneFarm:809 TAIR:At4g17040 InParanoid:Q8LB10 OMA:YFSPSEA
PhylomeDB:Q8LB10 ProtClustDB:CLSN2689477 Genevestigator:Q8LB10
Uniprot:Q8LB10
Length = 305
Score = 228 (85.3 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 52/115 (45%), Positives = 70/115 (60%)
Query: 61 DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPG--------GS 112
D+ S L + RI+ + + S++ +++A+ L+LQ E +KPI++YINS G G
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGY 164
Query: 113 VTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQP 167
T IYD M YV PPI T CVG A A+LLL AG KG R +LP+S IMI QP
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQP 219
Score = 227 (85.0 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 49/89 (55%), Positives = 60/89 (67%)
Query: 177 IYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGVQGQATDI 236
IYD M YV PPI T CVG A A+LLL AG KG R +LP+S IMI QP QGQATD+
Sbjct: 171 IYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDV 230
Query: 237 QIQAEEIINLKKQINGLYVKHTGLSIEKI 265
+I +EI ++K ++ LY KH G S E+I
Sbjct: 231 EIARKEIKHIKTEMVKLYSKHIGKSPEQI 259
Score = 38 (18.4 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 287 LYVKHTGLSIEKIGKSTNLTEELSSVVKVTY 317
LY KH G S E+I + S V Y
Sbjct: 247 LYSKHIGKSPEQIEADMKRPKYFSPTEAVEY 277
>UNIPROTKB|P0C312 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:4530 "Oryza sativa" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
GO:GO:0005524 GO:GO:0009536 GO:GO:0006508 GO:GO:0004252
EMBL:AY522331 GO:GO:0009535 HOGENOM:HOG000285833 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 ProteinModelPortal:P0C312
Gramene:P0C312 Genevestigator:P0C312 Uniprot:P0C312
Length = 216
Score = 219 (82.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 50/126 (39%), Positives = 75/126 (59%)
Query: 44 PLVPIVIEQTGRGERAY-DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPI 102
P VP I G E + D+Y+ + RER + + I +++ + +++L E I
Sbjct: 6 PKVPYRIP--GDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDI 63
Query: 103 HMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRI 162
++INSPGG + SG+ I+DTMQ V P I T C+G A SMAS +L GE R + P++RI
Sbjct: 64 FLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARI 123
Query: 163 MIHQPS 168
M+HQP+
Sbjct: 124 MLHQPA 129
Score = 183 (69.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/99 (37%), Positives = 59/99 (59%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G + G+ I+DTMQ V P I T C+G A SMAS +L GE R + P++RIM
Sbjct: 65 LFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIM 124
Query: 222 IHQPSGGV-QGQATDIQIQAEEIINLKKQINGLYVKHTG 259
+HQP+ + + + ++ EE+ +++ I +Y TG
Sbjct: 125 LHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTG 163
>UNIPROTKB|P0C313 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:39946 "Oryza sativa Indica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0009536 GO:GO:0006508
GO:GO:0004252 EMBL:AY522329 GO:GO:0009535 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 ProtClustDB:CHL00028
RefSeq:YP_654230.1 ProteinModelPortal:P0C313 GeneID:4126873
Gramene:P0C313 Uniprot:P0C313
Length = 216
Score = 219 (82.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 50/126 (39%), Positives = 75/126 (59%)
Query: 44 PLVPIVIEQTGRGERAY-DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPI 102
P VP I G E + D+Y+ + RER + + I +++ + +++L E I
Sbjct: 6 PKVPYRIP--GDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDI 63
Query: 103 HMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRI 162
++INSPGG + SG+ I+DTMQ V P I T C+G A SMAS +L GE R + P++RI
Sbjct: 64 FLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARI 123
Query: 163 MIHQPS 168
M+HQP+
Sbjct: 124 MLHQPA 129
Score = 183 (69.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/99 (37%), Positives = 59/99 (59%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G + G+ I+DTMQ V P I T C+G A SMAS +L GE R + P++RIM
Sbjct: 65 LFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIM 124
Query: 222 IHQPSGGV-QGQATDIQIQAEEIINLKKQINGLYVKHTG 259
+HQP+ + + + ++ EE+ +++ I +Y TG
Sbjct: 125 LHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTG 163
>UNIPROTKB|P0C314 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:39947 "Oryza sativa Japonica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0009536 GO:GO:0006508
GO:GO:0004252 EMBL:X15901 EMBL:AY522330 GenomeReviews:AY522330_GR
GO:GO:0009535 eggNOG:COG0740 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 MEROPS:S14.002 ProtClustDB:CHL00028
PIR:JQ0251 RefSeq:NP_039410.1 ProteinModelPortal:P0C314
STRING:P0C314 GeneID:3131474 KEGG:osa:3131474 Gramene:P0C314
Uniprot:P0C314
Length = 216
Score = 219 (82.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 50/126 (39%), Positives = 75/126 (59%)
Query: 44 PLVPIVIEQTGRGERAY-DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPI 102
P VP I G E + D+Y+ + RER + + I +++ + +++L E I
Sbjct: 6 PKVPYRIP--GDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDI 63
Query: 103 HMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRI 162
++INSPGG + SG+ I+DTMQ V P I T C+G A SMAS +L GE R + P++RI
Sbjct: 64 FLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARI 123
Query: 163 MIHQPS 168
M+HQP+
Sbjct: 124 MLHQPA 129
Score = 183 (69.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/99 (37%), Positives = 59/99 (59%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G + G+ I+DTMQ V P I T C+G A SMAS +L GE R + P++RIM
Sbjct: 65 LFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIM 124
Query: 222 IHQPSGGV-QGQATDIQIQAEEIINLKKQINGLYVKHTG 259
+HQP+ + + + ++ EE+ +++ I +Y TG
Sbjct: 125 LHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTG 163
>UNIPROTKB|Q6ENE9 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:4536 "Oryza nivara" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
GO:GO:0005524 GO:GO:0009536 GO:GO:0009570 GO:GO:0006508
GO:GO:0004252 EMBL:AP006728 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_052774.1 ProteinModelPortal:Q6ENE9 MEROPS:S14.002
GeneID:2885922 Gramene:Q6ENE9 ProtClustDB:CHL00028 Uniprot:Q6ENE9
Length = 216
Score = 219 (82.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 50/126 (39%), Positives = 75/126 (59%)
Query: 44 PLVPIVIEQTGRGERAY-DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPI 102
P VP I G E + D+Y+ + RER + + I +++ + +++L E I
Sbjct: 6 PKVPYRIP--GDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDI 63
Query: 103 HMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRI 162
++INSPGG + SG+ I+DTMQ V P I T C+G A SMAS +L GE R + P++RI
Sbjct: 64 FLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARI 123
Query: 163 MIHQPS 168
M+HQP+
Sbjct: 124 MLHQPA 129
Score = 183 (69.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/99 (37%), Positives = 59/99 (59%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G + G+ I+DTMQ V P I T C+G A SMAS +L GE R + P++RIM
Sbjct: 65 LFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIM 124
Query: 222 IHQPSGGV-QGQATDIQIQAEEIINLKKQINGLYVKHTG 259
+HQP+ + + + ++ EE+ +++ I +Y TG
Sbjct: 125 LHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTG 163
>UNIPROTKB|Q6E6T0 [details] [associations]
symbol:Q6E6T0 "ATP-dependent Clp protease proteolytic
subunit" species:39947 "Oryza sativa Japonica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00382 Pfam:PF00574
GO:GO:0009536 GO:GO:0006508 GO:GO:0004252 GO:GO:0009535
HOGENOM:HOG000285833 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0009840 EMBL:AY538587 ProteinModelPortal:Q6E6T0 STRING:Q6E6T0
Gramene:Q6E6T0 Uniprot:Q6E6T0
Length = 209
Score = 211 (79.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 43/108 (39%), Positives = 67/108 (62%)
Query: 61 DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIY 120
D+Y+ + RER + + I +++ + +++L E I ++INSPGG + SG+ I+
Sbjct: 15 DLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIF 74
Query: 121 DTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPS 168
DTMQ V P I C+G A SMAS +L GE R + P++RIM+HQP+
Sbjct: 75 DTMQTVTPDIYAICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPA 122
Score = 178 (67.7 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Query: 162 IMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIM 221
+ I+ P G + G+ I+DTMQ V P I C+G A SMAS +L GE R + P++RIM
Sbjct: 58 LFINSPGGWLISGMAIFDTMQTVTPDIYAICLGIAASMASFILLGGEPTKRIAFPHARIM 117
Query: 222 IHQPSGGV-QGQATDIQIQAEEIINLKKQINGLYVKHTG 259
+HQP+ + + + ++ EE+ +++ I +Y TG
Sbjct: 118 LHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTG 156
>GENEDB_PFALCIPARUM|PFC0310c [details] [associations]
symbol:PFC0310c "ATP-dependent CLP protease,
putative" species:5833 "Plasmodium falciparum" [GO:0030163 "protein
catabolic process" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00382 Pfam:PF00574 GO:GO:0006508
GO:GO:0004252 GO:GO:0030163 EMBL:AL844502 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GO:GO:0020011
RefSeq:XP_001351149.1 PDB:2F6I PDBsum:2F6I
ProteinModelPortal:O97252 SMR:O97252 MEROPS:S14.011
EnsemblProtists:PFC0310c:mRNA GeneID:814391 KEGG:pfa:PFC0310c
EuPathDB:PlasmoDB:PF3D7_0307400 ProtClustDB:CLSZ2500462
EvolutionaryTrace:O97252 Uniprot:O97252
Length = 370
Score = 224 (83.9 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 48/109 (44%), Positives = 67/109 (61%)
Query: 61 DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIY 120
D+ ++RII + I+ + +++QLL+L + + I +YINSPGGS+ GL I
Sbjct: 186 DVKLFFFKKRIIYLTDEINKKTADELISQLLYLDN-INHNDIKIYINSPGGSINEGLAIL 244
Query: 121 DTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSG 169
D Y+ I T G SMAS++LA+G+KG R SLPN RIMIHQP G
Sbjct: 245 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLG 293
Score = 223 (83.6 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 48/109 (44%), Positives = 63/109 (57%)
Query: 161 RIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRI 220
+I I+ P G + GL I D Y+ I T G SMAS++LA+G+KG R SLPN RI
Sbjct: 227 KIYINSPGGSINEGLAILDIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRI 286
Query: 221 MIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
MIHQP G G DI+IQ +EI+ LKK + T ++E I K +
Sbjct: 287 MIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDS 335
>UNIPROTKB|O97252 [details] [associations]
symbol:PFC0310c "ATP-dependent CLP protease, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00382 Pfam:PF00574 GO:GO:0006508 GO:GO:0004252
GO:GO:0030163 EMBL:AL844502 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0020011 RefSeq:XP_001351149.1 PDB:2F6I
PDBsum:2F6I ProteinModelPortal:O97252 SMR:O97252 MEROPS:S14.011
EnsemblProtists:PFC0310c:mRNA GeneID:814391 KEGG:pfa:PFC0310c
EuPathDB:PlasmoDB:PF3D7_0307400 ProtClustDB:CLSZ2500462
EvolutionaryTrace:O97252 Uniprot:O97252
Length = 370
Score = 224 (83.9 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 48/109 (44%), Positives = 67/109 (61%)
Query: 61 DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPGGSVTSGLGIY 120
D+ ++RII + I+ + +++QLL+L + + I +YINSPGGS+ GL I
Sbjct: 186 DVKLFFFKKRIIYLTDEINKKTADELISQLLYLDN-INHNDIKIYINSPGGSINEGLAIL 244
Query: 121 DTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSG 169
D Y+ I T G SMAS++LA+G+KG R SLPN RIMIHQP G
Sbjct: 245 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLG 293
Score = 223 (83.6 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 48/109 (44%), Positives = 63/109 (57%)
Query: 161 RIMIHQPSGGVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRI 220
+I I+ P G + GL I D Y+ I T G SMAS++LA+G+KG R SLPN RI
Sbjct: 227 KIYINSPGGSINEGLAILDIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRI 286
Query: 221 MIHQPSGGVQGQATDIQIQAEEIINLKKQINGLYVKHTGLSIEKIGKST 269
MIHQP G G DI+IQ +EI+ LKK + T ++E I K +
Sbjct: 287 MIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDS 335
>GENEDB_PFALCIPARUM|PF14_0348 [details] [associations]
symbol:PF14_0348 "ATP-dependent Clp protease
proteolytic subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0020011 "apicoplast" evidence=ISS] InterPro:IPR001907
PRINTS:PR00127 Pfam:PF00574 GO:GO:0006508 GO:GO:0004252
EMBL:AE014187 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0020011 RefSeq:XP_001348522.1 PDBsum:4GM2
PDBsum:4HNK HSSP:P19245 ProteinModelPortal:Q8IL98
EnsemblProtists:PF14_0348:mRNA GeneID:811930 KEGG:pfa:PF14_0348
EuPathDB:PlasmoDB:PF3D7_1436800 OMA:GDSAVMR ProtClustDB:CLSZ2847446
Uniprot:Q8IL98
Length = 244
Score = 201 (75.8 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 44/116 (37%), Positives = 70/116 (60%)
Query: 61 DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPG---------- 110
+I S LL +RII + PI +S +++QLL+L+ ES +KPIH+YINS G
Sbjct: 59 NIPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINL 118
Query: 111 GSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 166
+T + I D + Y+ + T+C+G+A +A +L ++G+KG R SL NS ++Q
Sbjct: 119 NGITDVISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQ 174
Score = 151 (58.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 32/90 (35%), Positives = 56/90 (62%)
Query: 170 GVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGV 229
G+ + I D + Y+ + T+C+G+A +A +L ++G+KG R SL NS ++Q +
Sbjct: 120 GITDVISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSII 179
Query: 230 Q-GQATDIQIQAEEIINLKKQINGLYVKHT 258
QAT+I+IQ +EI+N KK++ + K+T
Sbjct: 180 PFNQATNIEIQNKEIMNTKKKVIEIISKNT 209
>UNIPROTKB|Q8IL98 [details] [associations]
symbol:PF14_0348 "ATP-dependent Clp protease proteolytic
subunit" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR001907 PRINTS:PR00127
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 EMBL:AE014187
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0020011 RefSeq:XP_001348522.1 PDBsum:4GM2 PDBsum:4HNK
HSSP:P19245 ProteinModelPortal:Q8IL98
EnsemblProtists:PF14_0348:mRNA GeneID:811930 KEGG:pfa:PF14_0348
EuPathDB:PlasmoDB:PF3D7_1436800 OMA:GDSAVMR ProtClustDB:CLSZ2847446
Uniprot:Q8IL98
Length = 244
Score = 201 (75.8 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 44/116 (37%), Positives = 70/116 (60%)
Query: 61 DIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPG---------- 110
+I S LL +RII + PI +S +++QLL+L+ ES +KPIH+YINS G
Sbjct: 59 NIPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINL 118
Query: 111 GSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQ 166
+T + I D + Y+ + T+C+G+A +A +L ++G+KG R SL NS ++Q
Sbjct: 119 NGITDVISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQ 174
Score = 151 (58.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 32/90 (35%), Positives = 56/90 (62%)
Query: 170 GVQVGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGGV 229
G+ + I D + Y+ + T+C+G+A +A +L ++G+KG R SL NS ++Q +
Sbjct: 120 GITDVISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSII 179
Query: 230 Q-GQATDIQIQAEEIINLKKQINGLYVKHT 258
QAT+I+IQ +EI+N KK++ + K+T
Sbjct: 180 PFNQATNIEIQNKEIMNTKKKVIEIISKNT 209
>TAIR|locus:2031070 [details] [associations]
symbol:CLPR1 "CLP protease proteolytic subunit 1"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009532 "plastid
stroma" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009534 EMBL:AC015445 eggNOG:COG0740
InterPro:IPR023562 PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022330
EMBL:AY045677 EMBL:BT000572 IPI:IPI00529610 PIR:T52451
RefSeq:NP_564560.1 UniGene:At.23793 UniGene:At.75198 PDB:1R96
PDBsum:1R96 ProteinModelPortal:Q9XJ35 SMR:Q9XJ35 IntAct:Q9XJ35
STRING:Q9XJ35 PaxDb:Q9XJ35 PRIDE:Q9XJ35 EnsemblPlants:AT1G49970.1
GeneID:841420 KEGG:ath:AT1G49970 GeneFarm:810 TAIR:At1g49970
HOGENOM:HOG000006365 InParanoid:Q9XJ35 OMA:AIDMWIK PhylomeDB:Q9XJ35
ProtClustDB:CLSN2688619 Genevestigator:Q9XJ35 Uniprot:Q9XJ35
Length = 387
Score = 164 (62.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 45/127 (35%), Positives = 67/127 (52%)
Query: 61 DIYSRLLRERIICVMG-PIDDSLSSVVVAQLLFLQSESSKKPIHMYINSPG--------- 110
D+ S LL RI C +G PI +++ ++VAQ ++L ++ KPI++YINSPG
Sbjct: 171 DLPSLLLDARI-CYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETV 229
Query: 111 GSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKGMRHSLPNSRIMIHQPSGG 170
GS T I DT+ Y + T G A A++LL+ G+KG R P+S ++ P
Sbjct: 230 GSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVN 289
Query: 171 VQVGLGI 177
G I
Sbjct: 290 RSSGAAI 296
>TIGR_CMR|SO_2964 [details] [associations]
symbol:SO_2964 "ClpP protease family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 Pfam:PF00574 GO:GO:0006508
GO:GO:0004252 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR023562 PANTHER:PTHR10381 RefSeq:NP_718533.1
ProteinModelPortal:Q8ED07 GeneID:1170652 KEGG:son:SO_2964
PATRIC:23525568 HOGENOM:HOG000138775 OMA:NSPGGDF
ProtClustDB:CLSK865009 Uniprot:Q8ED07
Length = 284
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 93 LQSESSKKPIHMYINSPGGSVTSGLGIYDTMQYVLPPIATWCVGQACSMASLLLAAGEKG 152
L+S ++K + +YINSPGG + G+ IY+ ++ + T +G A S AS++ AGE
Sbjct: 63 LRSIGNEKDVTVYINSPGGDMFEGIAIYNRLREHKGKVTTKVLGLAASAASVIYMAGEDD 122
Query: 153 MRHSLPNSRIMIH 165
R ++ +MIH
Sbjct: 123 ARFVASSAFLMIH 135
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 486 486 0.00081 119 3 11 22 0.47 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 606 (64 KB)
Total size of DFA: 264 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.45u 0.19s 40.64t Elapsed: 00:00:02
Total cpu time: 40.46u 0.19s 40.65t Elapsed: 00:00:02
Start: Thu Aug 15 11:29:14 2013 End: Thu Aug 15 11:29:16 2013