Query psy18237
Match_columns 1050
No_of_seqs 580 out of 3591
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 17:12:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1uzk_A Fibrillin-1; glycoprote 99.8 4.7E-20 1.6E-24 186.2 2.6 158 575-807 1-162 (162)
2 1z1y_A Ookinete surface protei 99.8 1.5E-19 5.2E-24 186.8 6.3 145 869-1050 10-170 (186)
3 1z1y_A Ookinete surface protei 99.8 2.4E-19 8.2E-24 185.3 7.1 147 774-940 10-174 (186)
4 4fbr_A Lectin, myxobacterial h 99.8 4.2E-22 1.4E-26 211.5 -14.6 212 246-608 43-263 (267)
5 4fbr_A Lectin, myxobacterial h 99.8 1.4E-21 4.8E-26 207.4 -11.5 166 442-740 95-265 (267)
6 2vj3_A Neurogenic locus notch 99.7 2.8E-18 9.5E-23 167.6 11.0 72 231-340 2-76 (135)
7 1uzk_A Fibrillin-1; glycoprote 99.7 7.5E-19 2.6E-23 177.3 4.3 151 306-493 1-158 (162)
8 2vj3_A Neurogenic locus notch 99.7 1.4E-17 4.6E-22 162.7 12.4 128 859-1029 2-132 (135)
9 2w86_A Fibrillin-1, fibrillin1 99.7 4.2E-19 1.4E-23 176.2 1.7 136 147-348 2-147 (147)
10 2bou_A EGF-like module contain 99.7 1.1E-17 3.7E-22 165.2 8.4 128 156-352 6-141 (143)
11 1yo8_A Thrombospondin-2; EGF, 99.7 4E-17 1.4E-21 194.7 11.8 133 147-348 1-145 (634)
12 1yo8_A Thrombospondin-2; EGF, 99.7 1.2E-16 4E-21 190.7 13.0 173 78-348 6-194 (634)
13 4d90_A EGF-like repeat and dis 99.6 4E-16 1.4E-20 154.0 11.6 116 150-341 1-129 (143)
14 1dx5_I Thrombomodulin; serine 99.6 5.6E-17 1.9E-21 154.2 3.5 111 147-343 2-113 (118)
15 1lmj_A Fibrillin 1; EGF, calci 99.6 9E-16 3.1E-20 137.2 6.0 86 232-348 1-86 (86)
16 2w86_A Fibrillin-1, fibrillin1 99.6 1.3E-16 4.3E-21 158.3 -0.2 144 575-807 2-147 (147)
17 2bou_A EGF-like module contain 99.6 4.4E-15 1.5E-19 146.4 10.1 126 871-1022 8-143 (143)
18 4d90_A EGF-like repeat and dis 99.5 1.2E-14 4.2E-19 143.3 11.1 116 905-1050 1-128 (143)
19 1dx5_I Thrombomodulin; serine 99.5 6E-15 2E-19 140.1 5.5 108 902-1050 2-110 (118)
20 1emn_A Fibrillin; extracellula 99.5 1.1E-14 3.6E-19 128.8 6.2 80 231-347 2-81 (82)
21 2vj2_A Jagged-1; signalling, p 99.5 1.3E-14 4.3E-19 147.2 7.0 142 65-341 17-165 (169)
22 2vj2_A Jagged-1; signalling, p 99.4 5E-14 1.7E-18 142.7 4.6 148 828-1050 14-164 (169)
23 1emn_A Fibrillin; extracellula 99.4 3E-13 1E-17 119.4 6.8 74 971-1050 2-75 (82)
24 1lmj_A Fibrillin 1; EGF, calci 99.4 5.8E-13 2E-17 118.9 6.3 75 973-1050 2-78 (86)
25 2ygq_A WIF-1, WNT inhibitory f 99.3 5.1E-13 1.7E-17 149.3 6.7 146 817-1050 153-303 (324)
26 1z6c_A Vitamin K-dependent pro 99.3 3.5E-13 1.2E-17 120.5 3.9 84 232-350 1-86 (87)
27 2ygq_A WIF-1, WNT inhibitory f 99.3 7.8E-13 2.7E-17 147.8 6.9 151 713-939 152-306 (324)
28 1z6c_A Vitamin K-dependent pro 99.3 6E-13 2E-17 119.0 4.2 84 147-277 1-86 (87)
29 1x7a_L Coagulation factor IX, 99.3 9.7E-13 3.3E-17 129.5 5.2 87 231-356 45-133 (146)
30 1aut_L Activated protein C; se 99.3 2.8E-12 9.6E-17 120.9 6.2 92 231-356 3-101 (114)
31 1n7d_A LDL receptor, low-densi 99.3 1E-11 3.6E-16 154.0 12.7 156 149-351 212-375 (699)
32 2w2n_E LDL receptor, low-densi 99.2 1.3E-12 4.5E-17 121.3 2.3 79 233-347 28-106 (107)
33 3fcs_B Integrin beta-3; beta p 99.2 3E-11 1E-15 146.5 12.1 166 448-741 436-625 (690)
34 2vh0_B Activated factor XA lig 99.2 6.3E-12 2.2E-16 122.0 3.9 87 231-356 39-128 (134)
35 1nfu_B Coagulation factor XA, 99.2 8.3E-12 2.8E-16 127.9 3.7 88 231-357 39-129 (195)
36 1x7a_L Coagulation factor IX, 99.2 1.4E-11 4.7E-16 121.3 4.6 83 147-280 46-130 (146)
37 3fcs_B Integrin beta-3; beta p 99.1 5.3E-11 1.8E-15 144.4 9.2 168 811-1050 436-623 (690)
38 1aut_L Activated protein C; se 99.1 3.5E-11 1.2E-15 113.3 5.7 73 159-277 22-95 (114)
39 1n7d_A LDL receptor, low-densi 99.1 1.7E-10 5.9E-15 143.0 13.3 187 768-1012 174-371 (699)
40 3m0c_C LDL receptor, low-densi 99.1 3.8E-11 1.3E-15 149.8 7.0 153 151-352 232-394 (791)
41 1tpg_A T-plasminogen activator 99.1 5.7E-11 2E-15 106.9 5.5 53 249-341 25-82 (91)
42 2c4f_L Coagulation factor VII 99.1 1.2E-10 4E-15 114.2 6.6 88 231-356 44-136 (142)
43 2w2n_E LDL receptor, low-densi 99.0 3.2E-11 1.1E-15 111.9 1.7 86 67-188 16-106 (107)
44 1tpg_A T-plasminogen activator 99.0 1.4E-10 4.8E-15 104.3 5.7 78 830-938 1-83 (91)
45 2gy5_A Angiopoietin-1 receptor 99.0 1.1E-09 3.9E-14 126.5 11.3 162 549-842 182-346 (423)
46 3m0c_C LDL receptor, low-densi 99.0 6.5E-10 2.2E-14 138.7 8.8 185 777-1022 201-396 (791)
47 2vh0_B Activated factor XA lig 98.9 1.3E-10 4.4E-15 112.7 1.5 82 147-279 40-124 (134)
48 1nfu_B Coagulation factor XA, 98.9 1.9E-10 6.5E-15 117.8 1.5 71 147-267 40-113 (195)
49 3h5c_B Vitamin K-dependent pro 98.9 1.4E-09 4.6E-14 122.0 7.0 86 232-356 3-91 (317)
50 2c4f_L Coagulation factor VII 98.9 2.3E-09 8E-14 105.0 7.2 87 900-1020 43-132 (142)
51 3v65_B Low-density lipoprotein 98.8 9.2E-10 3.2E-14 126.9 2.3 85 232-351 1-85 (386)
52 3h5c_B Vitamin K-dependent pro 98.8 4.3E-09 1.5E-13 117.9 7.4 85 147-281 3-89 (317)
53 3p5b_L Low density lipoprotein 98.8 3.3E-09 1.1E-13 122.8 5.6 81 235-351 1-81 (400)
54 4aqs_A Laminin subunit beta-1; 98.7 8.5E-09 2.9E-13 123.4 6.8 104 782-897 411-523 (525)
55 3v65_B Low-density lipoprotein 98.7 2.1E-09 7.2E-14 123.8 1.4 83 148-277 2-84 (386)
56 2gy5_A Angiopoietin-1 receptor 98.7 1.8E-08 6.1E-13 116.4 8.8 127 478-741 184-317 (423)
57 3p5b_L Low density lipoprotein 98.7 1.3E-08 4.5E-13 117.7 6.1 79 150-277 1-80 (400)
58 3k6s_B Integrin beta-2; cell r 98.6 1.8E-08 6.2E-13 121.9 6.8 101 553-723 494-607 (687)
59 3k6s_B Integrin beta-2; cell r 98.6 4.6E-08 1.6E-12 118.4 7.7 172 713-943 434-622 (687)
60 4aqs_A Laminin subunit beta-1; 98.6 1.1E-07 3.7E-12 113.8 9.9 61 666-741 456-522 (525)
61 1apj_A Fibrillin; microfibril, 98.5 3.7E-09 1.3E-13 89.9 -2.3 69 346-414 1-70 (74)
62 2jkh_L Factor X light chain; p 98.2 3.8E-07 1.3E-11 73.4 2.1 46 150-196 2-47 (55)
63 2jkh_L Factor X light chain; p 98.2 9.8E-07 3.4E-11 70.9 3.4 46 578-624 2-47 (55)
64 1kli_L Factor VIIA; extrinsic 98.1 2.1E-06 7.1E-11 72.2 4.1 50 306-356 3-53 (69)
65 1apq_A Complement protease C1R 98.1 3.2E-06 1.1E-10 67.4 4.9 43 306-349 2-52 (53)
66 1kli_L Factor VIIA; extrinsic 98.1 1.2E-06 4.2E-11 73.6 2.4 51 231-283 2-53 (69)
67 1apq_A Complement protease C1R 98.0 3.9E-06 1.3E-10 66.9 3.5 42 147-189 2-51 (53)
68 3u7u_G Neuregulin 1; signaling 98.0 4.4E-06 1.5E-10 66.6 3.7 37 575-617 6-48 (55)
69 2kl7_A Fibulin-4; secreted, ca 97.9 9.3E-06 3.2E-10 68.8 4.6 40 306-345 1-42 (71)
70 1edm_B Factor IX; epidermal gr 97.8 1.1E-05 3.8E-10 59.7 3.5 36 148-189 2-38 (39)
71 1edm_B Factor IX; epidermal gr 97.8 9.5E-06 3.3E-10 60.1 3.0 37 575-617 1-38 (39)
72 1kig_L Factor XA; glycoprotein 97.8 6.3E-06 2.1E-10 65.0 1.9 38 156-194 5-42 (51)
73 3u7u_G Neuregulin 1; signaling 97.8 1.6E-05 5.4E-10 63.4 3.8 37 147-189 6-48 (55)
74 2kl7_A Fibulin-4; secreted, ca 97.8 1.5E-05 5E-10 67.6 3.8 69 147-224 1-71 (71)
75 1ksq_A Latent transforming gro 97.8 2.3E-06 7.8E-11 72.6 -1.2 64 350-413 7-73 (75)
76 1klo_A Laminin; glycoprotein; 97.8 3E-05 1E-09 77.3 6.7 123 454-617 2-145 (162)
77 1klo_A Laminin; glycoprotein; 97.7 2.3E-05 7.7E-10 78.2 5.1 123 586-742 2-144 (162)
78 1kig_L Factor XA; glycoprotein 97.7 1.7E-05 5.8E-10 62.5 2.7 45 312-357 2-46 (51)
79 2p28_B Integrin beta-2; hybrid 97.6 4.4E-05 1.5E-09 79.5 5.7 49 553-617 155-213 (217)
80 2bz6_L Blood coagulation facto 97.6 2.2E-05 7.5E-10 62.4 2.1 44 237-282 2-46 (53)
81 2k2s_B Micronemal protein 6; m 97.6 1.8E-05 6E-10 64.6 1.4 43 231-280 8-54 (61)
82 2bz6_L Blood coagulation facto 97.5 5.2E-05 1.8E-09 60.2 3.7 45 311-356 2-47 (53)
83 1gl4_A Nidogen-1, entactin; im 97.5 1.3E-05 4.3E-10 85.8 0.1 47 147-195 3-50 (285)
84 1gl4_A Nidogen-1, entactin; im 97.5 2E-05 6.7E-10 84.3 1.1 45 306-352 3-48 (285)
85 2k2s_B Micronemal protein 6; m 97.5 3.4E-05 1.2E-09 62.9 1.6 46 442-511 7-55 (61)
86 1egf_A Epidermal growth factor 97.4 0.00018 6.1E-09 57.1 4.8 38 148-189 2-43 (53)
87 1k36_A Epiregulin; EGF-like fo 97.3 0.0001 3.4E-09 56.6 2.7 38 148-189 2-42 (46)
88 1egf_A Epidermal growth factor 97.3 0.00013 4.4E-09 57.9 3.2 39 576-618 2-44 (53)
89 1k36_A Epiregulin; EGF-like fo 97.3 9.6E-05 3.3E-09 56.7 2.3 39 576-618 2-43 (46)
90 2wph_E Coagulation factor IXA 97.2 0.00021 7.3E-09 58.0 3.9 45 311-356 2-47 (59)
91 1a3p_A Epidermal growth factor 97.2 0.00029 9.8E-09 53.8 4.2 32 157-192 9-44 (45)
92 1a3p_A Epidermal growth factor 97.2 0.00032 1.1E-08 53.6 4.3 29 585-617 9-40 (45)
93 2p28_B Integrin beta-2; hybrid 97.1 0.00038 1.3E-08 72.4 5.5 102 817-938 96-211 (217)
94 1hae_A Heregulin-alpha; growth 97.0 0.00037 1.3E-08 57.5 3.6 42 577-624 6-54 (63)
95 1hae_A Heregulin-alpha; growth 96.9 0.00032 1.1E-08 57.8 2.4 42 149-196 6-54 (63)
96 3ca7_A Protein spitz; argos, E 96.9 0.00019 6.5E-09 56.7 0.4 40 552-617 3-47 (52)
97 2wph_E Coagulation factor IXA 96.8 0.00079 2.7E-08 54.6 3.9 36 585-621 7-43 (59)
98 2wg3_C Hedgehog-interacting pr 96.8 0.0003 1E-08 82.3 2.0 45 553-617 378-422 (463)
99 1ob1_C Major merozoite surface 96.7 0.0012 4E-08 58.5 4.0 66 157-267 10-85 (99)
100 3ca7_A Protein spitz; argos, E 96.6 0.00037 1.3E-08 55.0 0.5 29 713-741 13-45 (52)
101 1n1i_A Merozoite surface prote 96.6 0.0025 8.4E-08 56.7 5.5 65 158-267 17-86 (105)
102 1apj_A Fibrillin; microfibril, 96.6 0.00016 5.5E-09 61.3 -2.0 54 656-709 16-70 (74)
103 1szb_A Mannose binding lectin- 96.5 0.0011 3.9E-08 66.4 3.1 45 574-619 121-168 (170)
104 1szb_A Mannose binding lectin- 96.3 0.0027 9.4E-08 63.5 4.4 45 305-350 121-168 (170)
105 2wg3_C Hedgehog-interacting pr 96.3 0.00099 3.4E-08 77.9 1.3 75 67-191 379-456 (463)
106 1ob1_C Major merozoite surface 96.1 0.0053 1.8E-07 54.3 4.6 61 984-1049 14-83 (99)
107 1n1i_A Merozoite surface prote 95.9 0.015 5E-07 51.8 6.5 63 982-1049 17-84 (105)
108 1nql_B Epidermal growth factor 95.7 0.0054 1.9E-07 48.4 2.9 30 584-617 11-43 (53)
109 1g1s_A P-selectin; selectin, l 95.6 0.0035 1.2E-07 62.1 1.9 37 156-196 124-161 (162)
110 1ksq_A Latent transforming gro 95.2 0.0023 7.9E-08 54.2 -1.0 52 657-708 20-73 (75)
111 1g1s_A P-selectin; selectin, l 95.1 0.0083 2.8E-07 59.4 2.6 41 578-624 120-161 (162)
112 3zyj_B Netrin-G1; cell adhesio 94.8 0.01 3.5E-07 67.3 2.4 93 83-189 299-397 (426)
113 1nql_B Epidermal growth factor 94.7 0.019 6.6E-07 45.2 3.1 26 453-489 12-39 (53)
114 3zyj_B Netrin-G1; cell adhesio 94.7 0.015 5E-07 66.0 3.3 88 822-924 304-412 (426)
115 3f1s_B Vitamin K-dependent pro 94.4 0.016 5.5E-07 63.0 2.8 50 307-357 1-51 (283)
116 1nzi_A Complement C1S componen 94.2 0.037 1.2E-06 54.5 4.7 44 305-349 114-158 (159)
117 3v64_C Agrin; beta propeller, 93.9 0.022 7.4E-07 64.0 2.7 43 308-352 1-43 (349)
118 3f1s_B Vitamin K-dependent pro 93.8 0.026 8.8E-07 61.4 3.1 47 148-195 1-48 (283)
119 1nzi_A Complement C1S componen 93.5 0.037 1.3E-06 54.4 3.3 32 158-190 127-158 (159)
120 3v64_C Agrin; beta propeller, 93.1 0.041 1.4E-06 61.7 3.2 42 577-620 1-42 (349)
121 2fd6_A Urokinase-type plasmino 92.9 0.097 3.3E-06 49.1 4.9 26 715-740 2-30 (122)
122 3ltf_D Protein spitz; receptor 92.6 0.048 1.6E-06 43.8 2.1 28 715-742 15-46 (58)
123 3ltf_D Protein spitz; receptor 92.5 0.052 1.8E-06 43.6 2.2 29 586-618 15-48 (58)
124 1iox_A Betacellulin; EGF-like 91.5 0.14 4.8E-06 39.7 3.4 31 584-618 13-45 (50)
125 3e50_C Protransforming growth 91.4 0.11 3.8E-06 40.2 2.7 33 584-620 13-47 (50)
126 2rnl_A Amphiregulin; AR, color 90.9 0.18 6.2E-06 39.0 3.5 37 577-617 9-48 (50)
127 3cfw_A L-selectin; EGF, cell a 90.2 0.12 4.2E-06 50.9 2.6 37 156-196 124-161 (164)
128 1q4g_A Prostaglandin G/H synth 90.2 0.16 5.3E-06 60.3 3.9 35 577-617 2-39 (553)
129 1q4g_A Prostaglandin G/H synth 89.6 0.15 5.2E-06 60.4 3.2 35 149-189 2-39 (553)
130 1xdt_R Hbegf, heparin-binding 89.6 0.14 4.9E-06 43.4 2.1 37 577-617 37-76 (79)
131 2fd6_A Urokinase-type plasmino 89.4 0.35 1.2E-05 45.2 4.9 35 982-1022 2-41 (122)
132 3e50_C Protransforming growth 89.2 0.25 8.6E-06 38.2 3.1 33 156-192 13-47 (50)
133 1iox_A Betacellulin; EGF-like 87.9 0.33 1.1E-05 37.6 2.9 30 156-189 13-44 (50)
134 3nt1_A Prostaglandin-endoperox 87.6 0.24 8.3E-06 58.8 3.0 35 149-189 1-38 (587)
135 3nt1_A Prostaglandin-endoperox 87.4 0.27 9.3E-06 58.4 3.3 35 577-617 1-38 (587)
136 2rnl_A Amphiregulin; AR, color 86.2 0.46 1.6E-05 36.7 2.9 29 157-189 18-48 (50)
137 1ijq_A LDL receptor, low-densi 85.7 0.54 1.8E-05 51.6 4.4 41 307-348 266-315 (316)
138 4a0p_A LRP6, LRP-6, low-densit 84.8 0.5 1.7E-05 57.3 3.9 43 307-350 264-307 (628)
139 3cfw_A L-selectin; EGF, cell a 84.5 0.46 1.6E-05 46.6 2.8 41 447-511 120-160 (164)
140 1xdt_R Hbegf, heparin-binding 84.3 0.44 1.5E-05 40.5 2.1 39 147-189 35-76 (79)
141 3sov_A LRP-6, low-density lipo 83.4 0.7 2.4E-05 50.8 4.0 42 308-350 267-310 (318)
142 1ijq_A LDL receptor, low-densi 79.3 1.2 4.1E-05 48.7 4.1 41 576-617 266-315 (316)
143 4aqt_A Laminin subunit gamma-1 79.0 2.1 7.3E-05 47.9 5.9 15 478-492 271-285 (375)
144 1g1t_A E-selectin; EGF, adhesi 78.8 0.59 2E-05 45.4 1.2 30 156-189 124-154 (157)
145 3s94_A LRP-6, low-density lipo 78.7 1 3.6E-05 54.4 3.6 41 307-348 577-617 (619)
146 4a0p_A LRP6, LRP-6, low-densit 76.1 1.1 3.8E-05 54.2 2.8 46 233-280 264-310 (628)
147 2i9a_A Urokinase-type plasmino 73.6 2.7 9.3E-05 40.4 4.2 27 714-740 13-42 (145)
148 2i9a_A Urokinase-type plasmino 73.1 3 0.0001 40.1 4.4 56 982-1043 14-74 (145)
149 1g1t_A E-selectin; EGF, adhesi 72.9 1.3 4.4E-05 42.9 1.8 34 578-617 120-154 (157)
150 3sov_A LRP-6, low-density lipo 72.2 2.4 8.2E-05 46.5 4.0 37 975-1012 268-307 (318)
151 4aqt_A Laminin subunit gamma-1 69.3 6.6 0.00022 43.9 6.7 20 594-617 267-286 (375)
152 3s94_A LRP-6, low-density lipo 68.2 2.4 8.2E-05 51.2 3.2 40 577-617 578-617 (619)
153 2y38_A Laminin subunit alpha-5 67.2 6.3 0.00022 44.4 6.0 68 669-760 285-380 (403)
154 2ygo_A WIF-1, WNT inhibitory f 61.6 4.7 0.00016 40.0 3.2 26 713-741 152-177 (188)
155 3fby_A COMP, cartilage oligome 61.5 8.8 0.0003 44.4 5.8 40 148-189 17-59 (551)
156 1b9w_A Protein (merozoite surf 61.4 11 0.00039 32.6 5.1 60 779-840 15-79 (95)
157 2y38_A Laminin subunit alpha-5 61.4 19 0.00065 40.5 8.5 28 715-742 267-299 (403)
158 2ygo_A WIF-1, WNT inhibitory f 61.2 4.8 0.00016 40.0 3.2 24 453-490 153-176 (188)
159 3asi_A Neurexin-1-alpha; beta- 59.7 5.9 0.0002 45.0 4.2 36 577-618 185-222 (410)
160 1b9w_A Protein (merozoite surf 55.9 22 0.00074 30.9 5.8 64 982-1048 11-78 (95)
161 3asi_A Neurexin-1-alpha; beta- 53.2 7.9 0.00027 43.9 3.8 36 149-190 185-222 (410)
162 3fby_A COMP, cartilage oligome 48.7 11 0.00037 43.6 3.9 31 316-348 27-59 (551)
163 3dem_A Complement factor MAsp- 41.0 20 0.00069 37.9 4.4 31 317-348 133-163 (278)
164 1nt0_A MAsp2, mannose-binding 38.0 21 0.00071 38.2 3.9 31 317-348 132-162 (286)
165 3qcw_A Neurexin-1-alpha; synap 31.7 28 0.00095 45.6 4.2 35 577-617 619-655 (1245)
166 3dem_A Complement factor MAsp- 30.1 24 0.00081 37.4 2.7 31 158-189 133-163 (278)
167 3qcw_A Neurexin-1-alpha; synap 28.2 31 0.0011 45.0 3.9 35 149-189 619-655 (1245)
168 2e26_A Reelin, reeler protein; 25.4 25 0.00084 42.3 1.9 44 554-617 520-564 (725)
169 2p26_A Integrin beta-2; hybrid 24.8 44 0.0015 35.6 3.5 55 983-1049 198-263 (280)
170 2p26_A Integrin beta-2; hybrid 24.3 40 0.0014 35.9 3.1 61 553-617 208-274 (280)
171 2e26_A Reelin, reeler protein; 21.3 42 0.0014 40.4 2.7 41 67-113 520-564 (725)
172 3ssb_I IMPI alpha, inducible m 20.7 52 0.0018 22.6 2.0 22 601-623 7-28 (32)
No 1
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.77 E-value=4.7e-20 Score=186.17 Aligned_cols=158 Identities=36% Similarity=0.874 Sum_probs=120.0
Q ss_pred ccCccccCCCCCCCCCeeecCCCceEEecCCCeEeCCCCCccccCcc--ccccCCCCCccccCcccchhhhhcccCCcCC
Q psy18237 575 IDLDECRMMSYLCRNGRCRNNIGSFFCECLQGYTLASEGQYCRDVDE--CKEVNKRESRCYLDTEEEEEEEEEEEGGYGG 652 (1050)
Q Consensus 575 ~dideC~~~~~~C~ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~~~~e--C~~~~~~~~~C~~~~~~c~~~~c~~~g~~~~ 652 (1050)
+|||||+. +++|.+|+|+|++|+|+|.|++||+++++|++|+++++ |...+.. |.
T Consensus 1 ~dideC~~-~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~----------c~------------ 57 (162)
T 1uzk_A 1 TDVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRP----------RG------------ 57 (162)
T ss_dssp CCCCGGGS-TTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC--------------------------
T ss_pred CccccCCC-CCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcc----------cC------------
Confidence 47999985 47898899999999999999999999999999998886 7654210 00
Q ss_pred CCCccccccCCCCCCCcceeecCCCCccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCEEeecCCCeEEe
Q psy18237 653 GSRRVTCTKEIAGSTTRSTCCCSIGKAWGPQCEECPAVGSDEHKTLCPGGSGYRPNSATREGICPSPGKCQNVMGSFICT 732 (1050)
Q Consensus 653 ~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~c~~~~~~~~~~~Cp~g~g~~~~~~~~~~~C~~~g~C~~~~gsy~C~ 732 (1050)
...+++|.+..+...+.++|.|++||.|+..|+.|+ . +..++|+|+
T Consensus 58 ~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~-----------------------------~-----~~~~~y~C~ 103 (162)
T 1uzk_A 58 DNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCP-----------------------------A-----VNTSEYKIL 103 (162)
T ss_dssp ------CEEEEEEEECHHHHHTTTCCEETTTTEECC-----------------------------C-----TTSHHHHHH
T ss_pred CCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCC-----------------------------C-----CCCCCceeE
Confidence 012345555443334468899999998788776432 1 135689999
Q ss_pred CCC--CcccCCCCCcccccccccCCCCCCCCCCCCCCCccCCCCCCCCCCeEEeCCCCeeeeCCCCceeCCCCCccc
Q psy18237 733 CPP--GYRLSPDKNSCQEDFAKLCPEGVGRGDKGEDLNECALMPSACQGGECINTDGSYRCECPAGYVKDETGKICI 807 (1050)
Q Consensus 733 C~~--Gy~g~~~~~~C~~~~~c~C~~g~~~~~~~~~ideC~~~~~~C~~g~C~~~~gsy~C~C~~Gy~~~~~g~~C~ 807 (1050)
|++ ||+++.....|+ +||||...+++|.+++|+++.++|+|.|++||+++..++.|+
T Consensus 104 C~~g~G~~~~~~~~~c~------------------dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 104 CPGGEGFRPNPITVILE------------------DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp CTTCTTEEECTTTCCEE------------------ECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred CCCCCCcccCCCCCccC------------------ccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 988 999976655555 899998877779888999999999999999999887777763
No 2
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.77 E-value=1.5e-19 Score=186.82 Aligned_cols=145 Identities=26% Similarity=0.744 Sum_probs=117.2
Q ss_pred CCCCCCCccccCCCceeeecCCCceeCCCCCCcccCCccCCC--CCCCC-CCEEeeCC-----CCeEEecCCCceeCCCC
Q psy18237 869 PGICANGDCANFQGSFQCTCANGYTLNTARDSCVDIDECARH--PNICN-NGTCVNAI-----GSFKCHCYAGFKLSHNN 940 (1050)
Q Consensus 869 ~~~C~ng~C~~~~gsy~C~C~~Gy~g~~~~~~C~~ideC~~~--~~~C~-~g~C~n~~-----g~y~C~C~~Gy~g~~~~ 940 (1050)
..+|.|++|+++.++|+|.|++||+|. ....|++||+|... +..|. +++|+++. ++|+|.|++||+|...
T Consensus 10 ~~pC~ng~C~~~~g~~~C~C~~G~~g~-~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~- 87 (186)
T 1z1y_A 10 DTICXNGQLVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED- 87 (186)
T ss_dssp TCCCBTEEEEECSSCEEEEECTTEEEE-ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT-
T ss_pred CCCCCCCEeECCCCCeEeECCCCCccC-CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC-
Confidence 345888999999999999999999997 33579999999832 33487 78999998 8999999999999752
Q ss_pred CCccccccCCCCCCCCCcCCCeeccCCCCCCccCCCCCCCCCC-CCCeEe----ecCCceeeeCCCCCeeCC-CCCcccc
Q psy18237 941 DCIGNCTDINECESPQACLYGNCTNTLGSNCTDINECESPQAC-LYGNCT----NTLGSFSCTCPPNYQLTP-AGNACVV 1014 (1050)
Q Consensus 941 ~C~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~di~eC~~~~~C-~~g~C~----~~~g~y~C~C~~Gy~~~~-~g~~C~~ 1014 (1050)
. |. |++|. ..+| ++|+|+ ++.++|+|.|++||+|.. +++.|+.
T Consensus 88 --~---------------------------C~-~d~C~-~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~ 136 (186)
T 1z1y_A 88 --T---------------------------CV-LDVCQ-YXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTX 136 (186)
T ss_dssp --E---------------------------EE-EGGGT-TCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEE
T ss_pred --C---------------------------CC-CCcCc-CCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceE
Confidence 1 11 46663 4568 578998 888999999999999854 5788931
Q ss_pred cccCCcccCCCCCC-C-CCeEEecCCCeEeecCCCCcC
Q psy18237 1015 LEDINECEEHDNIC-E-NGHCTNTFGSFMCSCQDGFKL 1050 (1050)
Q Consensus 1015 ~~dideC~~~~~~C-~-~g~C~n~~gsy~C~C~~Gy~g 1050 (1050)
++++||. .+| . +++|+++.++|+|+|++||+|
T Consensus 137 -~~~~~C~---~~C~~~~~~C~n~~g~y~C~C~~G~~g 170 (186)
T 1z1y_A 137 -TGETACQ---LXCNTDNEVCXNVEGVYXCQCMEGFTF 170 (186)
T ss_dssp -EECCCCC---CCCCTTTEEEEEETTEEEEEECTTCEE
T ss_pred -cCCCccc---ccccccCcceecCCCCeeeECCCCCcc
Confidence 1248997 389 7 789999999999999999975
No 3
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.77 E-value=2.4e-19 Score=185.34 Aligned_cols=147 Identities=27% Similarity=0.707 Sum_probs=123.7
Q ss_pred CCCCCCCeEEeCCCCeeeeCCCCceeCCCCCccccCCccCCC--CCCC-CCCeEecCC-----CceEEecCCCCcCCCCC
Q psy18237 774 PSACQGGECINTDGSYRCECPAGYVKDETGKICIDDNECLSI--PNIC-GNGTCTNLN-----GGFECTCSEGYAPGPLG 845 (1050)
Q Consensus 774 ~~~C~~g~C~~~~gsy~C~C~~Gy~~~~~g~~C~~~~~C~~~--~~~C-~~g~C~~~~-----g~~~C~C~~Gy~g~~~~ 845 (1050)
+.+|.||+|+++.++|+|.|++||++. .+..|+++++|... ..+| ++++|+++. ++|+|.|++||+|..
T Consensus 10 ~~pC~ng~C~~~~g~~~C~C~~G~~g~-~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~-- 86 (186)
T 1z1y_A 10 DTICXNGQLVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE-- 86 (186)
T ss_dssp TCCCBTEEEEECSSCEEEEECTTEEEE-ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET--
T ss_pred CCCCCCCEeECCCCCeEeECCCCCccC-CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC--
Confidence 456888999999999999999999876 46689999999843 4789 789999998 899999999999862
Q ss_pred CccccccCCCCCCCccCccccCCCCCCCC-Cccc----cCCCceeeecCCCceeCC-CCCCcccC--CccCCCCCCC-C-
Q psy18237 846 SCAILLTLPPISPSTDIDECYERPGICAN-GDCA----NFQGSFQCTCANGYTLNT-ARDSCVDI--DECARHPNIC-N- 915 (1050)
Q Consensus 846 ~C~~~~~~~~~~~C~~~~eC~~~~~~C~n-g~C~----~~~gsy~C~C~~Gy~g~~-~~~~C~~i--deC~~~~~~C-~- 915 (1050)
..|. +++|...+ |.+ ++|+ ++.++|+|.|++||+|.. ....|+++ ++|.. + | .
T Consensus 87 -----------~~C~-~d~C~~~~--C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~-~--C~~~ 149 (186)
T 1z1y_A 87 -----------DTCV-LDVCQYXN--CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQL-X--CNTD 149 (186)
T ss_dssp -----------TEEE-EGGGTTCC--CCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCC-C--CCTT
T ss_pred -----------CCCC-CCcCcCCC--CCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccc-c--cccc
Confidence 1344 78998654 985 8998 888999999999999954 34678865 89974 4 8 6
Q ss_pred CCEEeeCCCCeEEecCCCceeCCCC
Q psy18237 916 NGTCVNAIGSFKCHCYAGFKLSHNN 940 (1050)
Q Consensus 916 ~g~C~n~~g~y~C~C~~Gy~g~~~~ 940 (1050)
+++|+++.++|+|.|++||+|....
T Consensus 150 ~~~C~n~~g~y~C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 150 NEVCXNVEGVYXCQCMEGFTFDXEX 174 (186)
T ss_dssp TEEEEEETTEEEEEECTTCEEETTT
T ss_pred CcceecCCCCeeeECCCCCccCccc
Confidence 8899999999999999999998743
No 4
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.76 E-value=4.2e-22 Score=211.47 Aligned_cols=212 Identities=9% Similarity=-0.006 Sum_probs=138.6
Q ss_pred CCceecCCCCeEEEcCCCCccCCCCCCCc-CCCccccCC----CCCCCCCCceecCCCCCCCCCcccCccCcCCCCCCCC
Q psy18237 246 SGTCENNIGSFSCRCEDGYSVKPAEGPAC-TDENECTMR----THNCDDNADCINNPVNKTGTRCVDIDECATSIQRCGE 320 (1050)
Q Consensus 246 ~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C-~~ideC~~~----~~~C~~~~~C~n~~g~~~g~~C~dideC~~~~~~C~~ 320 (1050)
+|+|++.+++|+|.|++||+|.. | ++|+||... ..+|+++++| +.|..|++++||++. +|.+
T Consensus 43 gG~C~~g~~~y~C~Cp~Gf~G~~-----Ce~ni~ec~~~~~c~s~pC~nggtc------~~G~~c~~~~eC~s~--pC~n 109 (267)
T 4fbr_A 43 GGKTLKGTMTYNGEGPIGFRGTL-----SSANNYTVENQWGGTSAPWQPGGVW------VLGARDKQNIVAVSI--KSND 109 (267)
T ss_dssp TTSEEEEEEEETTSCCEEEEEEE-----CSTTEEEEEEESSSTTSCEEEEEEE------ECCCCSSCCEEEEEE--ECSS
T ss_pred CCeecCCCCCeEEeCCCCccccc-----ccccccccccccCcCCCcccCCCee------eccCccccccccCCC--CCCC
Confidence 48999999999999999999974 5 788886422 2345555555 468899999999974 6999
Q ss_pred -CeEeecCCceEEeCCCCCeeCCCCCccccccccccccccCCCCcCCCcCCCCcceeeecCCCCcCCCCCCCCCCCCCcc
Q psy18237 321 -GFCVNDVGTYHCVCPDGYMLLPSGKECIDMRRELCYLNYTDGLCSLPMSNEQTRMVCCCSMGQSWGKPCQPCPPPGSRD 399 (1050)
Q Consensus 321 -~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~g~~~~~~C~~Cp~~~~~~ 399 (1050)
|+|++..++|+|.|++||+|..... ++++ |... .+- .+.+|..
T Consensus 110 gG~C~~~~~sy~C~C~~Gf~G~~Ce~---~~d~--C~n~----------------------~~c-~s~pC~n-------- 153 (267)
T 4fbr_A 110 GGKTLTGTTTYNGEGPIGFKSEVTDG---DTYS--VENQ----------------------WGG-SAAPWHS-------- 153 (267)
T ss_dssp TTSEEEEEEEETTSCCEEEEEEECCC---CEEE--EEEE----------------------CSS-TTSCCEE--------
T ss_pred CCEEecCCccEEeeCCCCccccCCCC---Cccc--cccc----------------------CCc-CCccccC--------
Confidence 9999999999999999999943211 1111 1000 000 0001110
Q ss_pred eeeeccCCCCcccCCCCCCCCCCccCCCccccccccCCccccccccccccccCCCccccCCCceeeCCCCCcccccccce
Q psy18237 400 YILLCGKDFAKLCPEGVGRGDKGEDLNECRTVITVRDSYFTEQWRDAKKNQRLGFCYRSLTNGRCVLPTGPALLMEVTRM 479 (1050)
Q Consensus 400 ~~~~C~~~~g~~~~~~~~~~~~~~~i~eC~~~~~~~g~~~c~~C~d~~eC~~~~~C~~~~~~g~C~~~~g~~~~~~~~~~ 479 (1050)
..+| ..+.+|+ +++ +|.. .+|. ++|+|++..+ +|
T Consensus 154 -gg~c------------------------------~~G~~c~--~~i-~c~~-~~c~---ngg~C~dg~~--------~y 187 (267)
T 4fbr_A 154 -GGVW------------------------------VLGTRGK--QNV-INVD-AKSN---DGGKTLSGTM--------TY 187 (267)
T ss_dssp -EEEE------------------------------ECCSSTT--SCE-EEEE-EECS---STTSEEEEEE--------EE
T ss_pred -Ccce------------------------------ecccccc--ccc-ccCC-CCCC---CCCEeeCCCC--------Ce
Confidence 0001 0112121 122 3434 6788 9999999877 99
Q ss_pred eEeeCCCCccCCCCCCCCCCCCCCcc-ccchhcccCCCccC-ccccccccCCCcceeeeccccCCccccccCCccccccC
Q psy18237 480 DCCCTMGMAWGPQCQLCPTRGSQTCE-DINECLELSNQCAF-RCHNISMSVSNSLACALTPVLTRKISMSVSNSLACALT 557 (1050)
Q Consensus 480 ~C~C~~Gy~g~~~~~~c~~~~~~~C~-~~~eC~~~~~~C~~-~C~n~~~~~~~~~~C~CG~~g~~~~C~~~~~~~~C~C~ 557 (1050)
+|.|++||+| ..|+ +|++|. ....|.. .|.+.. + +.+.|.
T Consensus 188 ~C~Cp~Gf~G------------~~c~~~i~ec~-~~~~c~~~~c~~gG-----~--------------------~~~~C~ 229 (267)
T 4fbr_A 188 NGEGPIGFRG------------TLTSPDTYTVE-NQWGGSTAPWNPGG-----F--------------------WMIGAR 229 (267)
T ss_dssp TTSCCEEEEE------------EEEETTEEEEE-EECSCTTSCCEEEE-----E--------------------EECCCC
T ss_pred EEeCCCCccc------------cccccccceec-cCCCccCCcccCCC-----e--------------------EEEecC
Confidence 9999999998 7787 777764 2223333 333321 1 224466
Q ss_pred CCCcccccccccccCCcccCccccCCCCCCCC-CeeecCCCceEEecCCCeE
Q psy18237 558 PVLTRKVATPVAVINDCIDLDECRMMSYLCRN-GRCRNNIGSFFCECLQGYT 608 (1050)
Q Consensus 558 ~G~~G~~C~~~~~~~~C~dideC~~~~~~C~n-g~C~n~~gsy~C~C~~Gy~ 608 (1050)
.++.+..++ .+|.| |+|++...+|+|+|++||+
T Consensus 230 ~g~n~~~c~------------------~~c~ngGtC~dg~~sy~CeCp~GF~ 263 (267)
T 4fbr_A 230 NGQNVVALN------------------VASSDGGKTLAGTMIYNGEGPIGFR 263 (267)
T ss_dssp TTCCEEEEE------------------EECSSTTSEEEEEEEETTSCCEEEE
T ss_pred CCCccccCC------------------cCCCCCCEeeCCCcceeecCCCCcc
Confidence 666443332 35765 7999999999999999999
No 5
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.76 E-value=1.4e-21 Score=207.44 Aligned_cols=166 Identities=10% Similarity=0.006 Sum_probs=110.8
Q ss_pred ccccccccccCCCccccCCCceeeCCCCCcccccccceeEeeCCCCccCCCCCCCCCCCCCCcc-ccchhcccCCC-ccC
Q psy18237 442 QWRDAKKNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQTCE-DINECLELSNQ-CAF 519 (1050)
Q Consensus 442 ~C~d~~eC~~~~~C~~~~~~g~C~~~~g~~~~~~~~~~~C~C~~Gy~g~~~~~~c~~~~~~~C~-~~~eC~~~~~~-C~~ 519 (1050)
.|.+.+||++ .||. ++|+|++... +|+|+|++||+| ..|+ ++++|. ..+ |..
T Consensus 95 ~c~~~~eC~s-~pC~---ngG~C~~~~~--------sy~C~C~~Gf~G------------~~Ce~~~d~C~--n~~~c~s 148 (267)
T 4fbr_A 95 RDKQNIVAVS-IKSN---DGGKTLTGTT--------TYNGEGPIGFKS------------EVTDGDTYSVE--NQWGGSA 148 (267)
T ss_dssp CSSCCEEEEE-EECS---STTSEEEEEE--------EETTSCCEEEEE------------EECCCCEEEEE--EECSSTT
T ss_pred ccccccccCC-CCCC---CCCEEecCCc--------cEEeeCCCCccc------------cCCCCCccccc--ccCCcCC
Confidence 4566778888 8899 9999999877 999999999999 6676 778875 222 222
Q ss_pred -ccccccccCCCcceeeeccccCCccccccCCccccccCCCCcccccccccccCCcccCccccCCCCCCCC-CeeecCCC
Q psy18237 520 -RCHNISMSVSNSLACALTPVLTRKISMSVSNSLACALTPVLTRKVATPVAVINDCIDLDECRMMSYLCRN-GRCRNNIG 597 (1050)
Q Consensus 520 -~C~n~~~~~~~~~~C~CG~~g~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~~~C~dideC~~~~~~C~n-g~C~n~~g 597 (1050)
.|.+.. .+|.|.+|+ ++|+ |.. .+|.| |+|++..+
T Consensus 149 ~pC~ngg--------------------------------~c~~G~~c~--------~~i~-c~~--~~c~ngg~C~dg~~ 185 (267)
T 4fbr_A 149 APWHSGG--------------------------------VWVLGTRGK--------QNVI-NVD--AKSNDGGKTLSGTM 185 (267)
T ss_dssp SCCEEEE--------------------------------EEECCSSTT--------SCEE-EEE--EECSSTTSEEEEEE
T ss_pred ccccCCc--------------------------------ceecccccc--------cccc-cCC--CCCCCCCEeeCCCC
Confidence 333322 224455665 3343 443 57875 79999999
Q ss_pred ceEEecCCCeEeCCCCCccc-cCccccccCCCCCccccCcccchhhhhcccCCcCCCCCccccccCCCCCCCcceeecCC
Q psy18237 598 SFFCECLQGYTLASEGQYCR-DVDECKEVNKRESRCYLDTEEEEEEEEEEEGGYGGGSRRVTCTKEIAGSTTRSTCCCSI 676 (1050)
Q Consensus 598 sy~C~C~~Gy~~~~~G~~C~-~~~eC~~~~~~~~~C~~~~~~c~~~~c~~~g~~~~~~~~~~C~~~~~~~~~~~~C~C~~ 676 (1050)
+|+|+|++||+ |++|+ ++++|...+.. ...|+...|.| .+.|..
T Consensus 186 ~y~C~Cp~Gf~----G~~c~~~i~ec~~~~~c-----------~~~~c~~gG~~--------------------~~~C~~ 230 (267)
T 4fbr_A 186 TYNGEGPIGFR----GTLTSPDTYTVENQWGG-----------STAPWNPGGFW--------------------MIGARN 230 (267)
T ss_dssp EETTSCCEEEE----EEEEETTEEEEEEECSC-----------TTSCCEEEEEE--------------------ECCCCT
T ss_pred CeEEeCCCCcc----ccccccccceeccCCCc-----------cCCcccCCCeE--------------------EEecCC
Confidence 99999999999 99998 56665544322 11222111111 122333
Q ss_pred CCccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCEEeecCCCeEEeCCCCcccC
Q psy18237 677 GKAWGPQCEECPAVGSDEHKTLCPGGSGYRPNSATREGICPSPGKCQNVMGSFICTCPPGYRLS 740 (1050)
Q Consensus 677 G~~~G~~C~~c~~~~~~~~~~~Cp~g~g~~~~~~~~~~~C~~~g~C~~~~gsy~C~C~~Gy~g~ 740 (1050)
++ ....| ..+|.++|+|++...+|+|+|++||+|.
T Consensus 231 g~-n~~~c----------------------------~~~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 231 GQ-NVVAL----------------------------NVASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp TC-CEEEE----------------------------EEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred CC-ccccC----------------------------CcCCCCCCEeeCCCcceeecCCCCcccc
Confidence 32 11111 3468899999999999999999999984
No 6
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.75 E-value=2.8e-18 Score=167.56 Aligned_cols=72 Identities=35% Similarity=0.970 Sum_probs=63.0
Q ss_pred ecccccccCCCCCCCC-CceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcc-cC
Q psy18237 231 CRYINECEEMPEICGS-GTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCV-DI 308 (1050)
Q Consensus 231 c~~~~eC~~~~~~C~~-~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~-di 308 (1050)
|+|||||+..+++|.+ |+|+++.++|+|+|++||+|. .|+ +|
T Consensus 2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~------------------------------------~C~~~~ 45 (135)
T 2vj3_A 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP------------------------------------RCEIDV 45 (135)
T ss_dssp -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST------------------------------------TSCEEC
T ss_pred CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCC------------------------------------cccccC
Confidence 6799999987788985 999999999999999999986 454 77
Q ss_pred ccCcCCCCCCCC-CeEeecCCceEEeCCCCCee
Q psy18237 309 DECATSIQRCGE-GFCVNDVGTYHCVCPDGYML 340 (1050)
Q Consensus 309 deC~~~~~~C~~-~~C~n~~Gsy~C~C~~G~~g 340 (1050)
+||.. .+|.+ ++|+++.|+|+|.|++||+|
T Consensus 46 ~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~G 76 (135)
T 2vj3_A 46 NECVS--NPCQNDATCLDQIGEFQCICMPGYEG 76 (135)
T ss_dssp CTTTT--CCCCSSCEEEECSSCEEEECCTTEES
T ss_pred ccCCC--CCCCCCCEEeCCCCCceeeCCCCCcC
Confidence 78865 46888 99999999999999999998
No 7
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.73 E-value=7.5e-19 Score=177.34 Aligned_cols=151 Identities=32% Similarity=0.767 Sum_probs=119.6
Q ss_pred ccCccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCcccccccccccccc------CCCCcCCCcCCCCcceeeec
Q psy18237 306 VDIDECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMRRELCYLNY------TDGLCSLPMSNEQTRMVCCC 379 (1050)
Q Consensus 306 ~dideC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~~~~------~~~~C~~~~~~~~~~~~C~C 379 (1050)
+|||||++ +.+|.+|+|+|++|+|+|.|++||++..+++.|+++++..|.... ..+.|++......+++.|.|
T Consensus 1 ~dideC~~-~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C 79 (162)
T 1uzk_A 1 TDVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC 79 (162)
T ss_dssp CCCCGGGS-TTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred CccccCCC-CCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence 37889985 467977999999999999999999998889999998876776543 24566655433445799999
Q ss_pred CCCCcCCCCCCCCCCCCCcceeeeccCCCCcccCCCCCCCCCCccCCCccccccccCCccccccccccccccC-CCcccc
Q psy18237 380 SMGQSWGKPCQPCPPPGSRDYILLCGKDFAKLCPEGVGRGDKGEDLNECRTVITVRDSYFTEQWRDAKKNQRL-GFCYRS 458 (1050)
Q Consensus 380 ~~g~~~~~~C~~Cp~~~~~~~~~~C~~~~g~~~~~~~~~~~~~~~i~eC~~~~~~~g~~~c~~C~d~~eC~~~-~~C~~~ 458 (1050)
++||.|+.+|+.|+......|..+|+.+.||..+.. .. .|+|||||+.. .+|+
T Consensus 80 ~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~---------------------~~---~c~dideC~~~~~~C~-- 133 (162)
T 1uzk_A 80 SLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPI---------------------TV---ILEDIDECQELPGLCQ-- 133 (162)
T ss_dssp TTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTT---------------------TC---CEEECCHHHHCGGGGB--
T ss_pred CCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCC---------------------CC---ccCccccccCCCCCcC--
Confidence 999999999999998877888888887779986532 11 35678888763 5698
Q ss_pred CCCceeeCCCCCcccccccceeEeeCCCCccCCCC
Q psy18237 459 LTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQC 493 (1050)
Q Consensus 459 ~~~g~C~~~~g~~~~~~~~~~~C~C~~Gy~g~~~~ 493 (1050)
+ ++|++++| +|+|.|++||+|...+
T Consensus 134 -~-g~C~n~~g--------sy~C~C~~Gy~g~~d~ 158 (162)
T 1uzk_A 134 -G-GKCINTFG--------SFQCRCPTGYYLNEDT 158 (162)
T ss_dssp -T-SEEEECSS--------CEEEECCTTCCBCTTT
T ss_pred -C-CEeEcCCC--------CEEeeCCCCccCCCCC
Confidence 5 79999999 9999999999997654
No 8
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.73 E-value=1.4e-17 Score=162.67 Aligned_cols=128 Identities=34% Similarity=0.918 Sum_probs=98.9
Q ss_pred CccCccccCCCCCCCC-CccccCCCceeeecCCCceeCCCCCCcccCCccCCCCCCCC-CCEEeeCCCCeEEecCCCcee
Q psy18237 859 STDIDECYERPGICAN-GDCANFQGSFQCTCANGYTLNTARDSCVDIDECARHPNICN-NGTCVNAIGSFKCHCYAGFKL 936 (1050)
Q Consensus 859 C~~~~eC~~~~~~C~n-g~C~~~~gsy~C~C~~Gy~g~~~~~~C~~ideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~g 936 (1050)
|++||||+...++|.+ ++|+++.++|+|+|++||+|..+. .++++|...+ |. +++|++..++|+|.|++||+|
T Consensus 2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~---~~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~G 76 (135)
T 2vj3_A 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE---IDVNECVSNP--CQNDATCLDQIGEFQCICMPGYEG 76 (135)
T ss_dssp -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSC---EECCTTTTCC--CCSSCEEEECSSCEEEECCTTEES
T ss_pred CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccc---ccCccCCCCC--CCCCCEEeCCCCCceeeCCCCCcC
Confidence 5789999866677986 999999999999999999985432 4899999876 87 789999999999999999998
Q ss_pred CCCCCCccccccCCCCCCCCCcCCCeeccCCCCCCccCCCCCCCCCC-CCCeEeecCCceeeeCCCCCeeCCCCCccccc
Q psy18237 937 SHNNDCIGNCTDINECESPQACLYGNCTNTLGSNCTDINECESPQAC-LYGNCTNTLGSFSCTCPPNYQLTPAGNACVVL 1015 (1050)
Q Consensus 937 ~~~~~C~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~di~eC~~~~~C-~~g~C~~~~g~y~C~C~~Gy~~~~~g~~C~~~ 1015 (1050)
.. |+ .++++| ...+| ++|+|+++.++|+|.|++||+ |..|+
T Consensus 77 ~~---C~----------------------------~~~~~C-~~~~C~~~g~C~~~~g~~~C~C~~G~~----G~~C~-- 118 (135)
T 2vj3_A 77 VH---CE----------------------------VNTDEC-ASSPCLHNGRCLDKINEFQCECPTGFT----GHLCQ-- 118 (135)
T ss_dssp SS---SC----------------------------EECCTT-TTCCSTTTCEEEECSSCEEEECCTTEE----SSSSC--
T ss_pred Cc---ce----------------------------ecCCcc-cCCCcCCCCEeECCCCCeEEECCCCCc----CCccC--
Confidence 75 44 245666 35678 668999999999999999999 77894
Q ss_pred ccCCcccCCCCCCC
Q psy18237 1016 EDINECEEHDNICE 1029 (1050)
Q Consensus 1016 ~dideC~~~~~~C~ 1029 (1050)
.+|+||+..+..|.
T Consensus 119 ~~i~~C~~~~~~c~ 132 (135)
T 2vj3_A 119 VDLHHILDAQKMVW 132 (135)
T ss_dssp EECC----------
T ss_pred ccCccccCCCccee
Confidence 58999988766664
No 9
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.73 E-value=4.2e-19 Score=176.15 Aligned_cols=136 Identities=37% Similarity=0.813 Sum_probs=98.5
Q ss_pred cccccccCCCCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccccCC
Q psy18237 147 EEIDECNLMPNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCENNI 226 (1050)
Q Consensus 147 ~di~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~ 226 (1050)
+|||||+ .++|+||+|+|++|+|+|.|++||+|+..+..|++++.. . |..+|. ++.|.
T Consensus 2 ~dideC~--~~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~-----~---------C~~~~~---g~~C~--- 59 (147)
T 2w86_A 2 ADIDECE--SSPCINGVCKNSPGSFICECSSESTLDPTKTICIETIKG-----T---------CWQTVI---DGRCE--- 59 (147)
T ss_dssp CCCCGGG--GCCSBTSEEEEETTEEEEECCTTEEECTTSSBEEECCCE-----E---------EEEEEE---TTEEE---
T ss_pred CcCccCc--CCCCCCCEeECCCCCEEeECCCCcccCCCCCeecCCCCC-----c---------ccCCCC---CCccc---
Confidence 4789998 588998999999999999999999998777778765321 1 222221 22221
Q ss_pred CceeecccccccCCCCCCCCCceecCCCC----------eEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecC
Q psy18237 227 GSFSCRYINECEEMPEICGSGTCENNIGS----------FSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINN 296 (1050)
Q Consensus 227 g~~~c~~~~eC~~~~~~C~~~~C~~~~g~----------y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~ 296 (1050)
.++++|.. ++.|.+..++ |+|+|++||++.
T Consensus 60 -----~~~~~c~~------~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~----------------------------- 99 (147)
T 2w86_A 60 -----ININGATL------KSQCCSSLGAAWGSPCTLCQVDPICGKGYSRI----------------------------- 99 (147)
T ss_dssp -----EEEEEEEC------HHHHHTTTCSEETTTTEECCCCTTTCTTEEEE-----------------------------
T ss_pred -----cCCCcccc------CCccccCcCcccCCCcccCCCcccCCCccccC-----------------------------
Confidence 23444432 1233333333 788999999863
Q ss_pred CCCCCCCCcccCccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCccc
Q psy18237 297 PVNKTGTRCVDIDECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECI 348 (1050)
Q Consensus 297 ~g~~~g~~C~dideC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~ 348 (1050)
+|..|+|||||++++++|++|+|+|++|+|+|.|++||+|..++++|+
T Consensus 100 ----~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 100 ----KGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp ----ETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred ----CCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 244678888888767789889999999999999999999988888774
No 10
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.71 E-value=1.1e-17 Score=165.19 Aligned_cols=128 Identities=30% Similarity=0.699 Sum_probs=96.1
Q ss_pred CCCCC-CCeeecCCCCeEeeCCCCCeeC-----CCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccccCCCce
Q psy18237 156 PNMCN-HGTCMNTPGSFHCQCNRGFLYD-----SDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCENNIGSF 229 (1050)
Q Consensus 156 ~~~C~-~~~C~~~~g~y~C~C~~Gy~~~-----~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~g~~ 229 (1050)
+++|. +|+|+++ |+|.|++||+|. .++..|+|||||+...
T Consensus 6 ~~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~------------------------------- 51 (143)
T 2bou_A 6 ARWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLS------------------------------- 51 (143)
T ss_dssp CTTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC---------------------------------
T ss_pred cCcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCC-------------------------------
Confidence 36787 6899885 899999999974 2245666666665411
Q ss_pred eecccccccCCCCCCC-CCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcccC
Q psy18237 230 SCRYINECEEMPEICG-SGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVDI 308 (1050)
Q Consensus 230 ~c~~~~eC~~~~~~C~-~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~di 308 (1050)
...|. +++|+++.++|+|+|++||+|.... ..+. ...+..|+||
T Consensus 52 -----------~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~-~~~~-----------------------~~~~~~C~di 96 (143)
T 2bou_A 52 -----------KVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA-KTFK-----------------------NESENTCQDV 96 (143)
T ss_dssp -------------CCCTTEEEEECSSCEEEEECTTEEETTCC-SCBS-----------------------SGGGCCEEEC
T ss_pred -----------CCCCCCCCEEEcCCCCeEeECCCCcccCcCc-cccc-----------------------cCCCCCcCCc
Confidence 12465 4899999999999999999997311 1110 0135579999
Q ss_pred ccCcCCCCCCCC-CeEeecCCceEEeCCCCCeeCCCCCccccccc
Q psy18237 309 DECATSIQRCGE-GFCVNDVGTYHCVCPDGYMLLPSGKECIDMRR 352 (1050)
Q Consensus 309 deC~~~~~~C~~-~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~ 352 (1050)
|||+..+++|++ ++|+|+.|+|+|.|++||+|..+++.|.++++
T Consensus 97 deC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~ 141 (143)
T 2bou_A 97 DECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTV 141 (143)
T ss_dssp CHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTCC
T ss_pred cCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCCc
Confidence 999876678998 99999999999999999999988888876654
No 11
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.69 E-value=4e-17 Score=194.65 Aligned_cols=133 Identities=28% Similarity=0.623 Sum_probs=101.5
Q ss_pred cccccccCCCCCCC-CCeeecCCC-CeEe-eCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccc
Q psy18237 147 EEIDECNLMPNMCN-HGTCMNTPG-SFHC-QCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCE 223 (1050)
Q Consensus 147 ~di~eC~~~~~~C~-~~~C~~~~g-~y~C-~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~ 223 (1050)
+|||||+ .++|+ +++|+++.+ +|+| .|++||+|+ +.+|++|+||+..++.|.+
T Consensus 1 ~DIDeC~--~nPC~~gg~C~n~~~Gsy~C~~C~~GytGd--g~~CeDiDEC~~~p~~C~~-------------------- 56 (634)
T 1yo8_A 1 ADPDGCL--SNPCFPGAQCSSFPDGSWSCGFCPVGFLGN--GTHCEDLDECALVPDICFS-------------------- 56 (634)
T ss_dssp ---CGGG--GCCSCTTCCEEECTTSCEEECCCCTTBCSC--SSSCCBCCTTTTSCCCSCC--------------------
T ss_pred CcccccC--CCCCCCCCEEecCCCCCeECCcCCCccCCC--CCCccccccccCCCCcccC--------------------
Confidence 3688887 78898 589999985 5999 999999965 6889988888764333433
Q ss_pred cCCCceeecccccccCCCCCCCCC---ceecCCCCeEEE-cCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCC
Q psy18237 224 NNIGSFSCRYINECEEMPEICGSG---TCENNIGSFSCR-CEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVN 299 (1050)
Q Consensus 224 ~~~g~~~c~~~~eC~~~~~~C~~~---~C~~~~g~y~C~-C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~ 299 (1050)
++ +|+++.++|+|. |++||+|..+ ....+..+.
T Consensus 57 ----------------------gg~~~~CvNt~gsY~C~~C~~Gy~G~~c---~g~g~~~~~------------------ 93 (634)
T 1yo8_A 57 ----------------------TSKVPRCVNTQPGFHCLPCPPRYRGNQP---VGVGLEAAK------------------ 93 (634)
T ss_dssp ----------------------CSSSCCEEECSSSEEECCCCTTEEECCC---EESSSHHHH------------------
T ss_pred ----------------------CccccceeeccCceecccCCCCcccCcc---ccccccccc------------------
Confidence 35 799999999999 9999999731 112222222
Q ss_pred CCCCCcccCccCcCCCCCCCC-CeEeecC----CceEEeCCCCCeeCCCCCccc
Q psy18237 300 KTGTRCVDIDECATSIQRCGE-GFCVNDV----GTYHCVCPDGYMLLPSGKECI 348 (1050)
Q Consensus 300 ~~g~~C~dideC~~~~~~C~~-~~C~n~~----Gsy~C~C~~G~~g~~~~~~C~ 348 (1050)
..+..|++|+||+..+++|++ ++|+++. |+|+|.|++||+| +++.|.
T Consensus 94 ~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce 145 (634)
T 1yo8_A 94 TEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICG 145 (634)
T ss_dssp SCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEE
T ss_pred cCCCcccccccccCCCcccccCccccccccccccceeeeccCCccc--cCcccc
Confidence 246689999999987789998 9999999 9999999999999 556664
No 12
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.67 E-value=1.2e-16 Score=190.69 Aligned_cols=173 Identities=24% Similarity=0.471 Sum_probs=121.6
Q ss_pred ccccCCCCCCcccCCCCC-Ccee-ecCCCcccCCCCCCccccCCCCCCCCCCCCeeccCCCCcccCCCCCccccccccCC
Q psy18237 78 TLTNVTSTNEYVTGDNVI-TRWC-VCDEGFRGDGYSCEDIDECTDNTNYCDYILLCGSKPGEFMNPMTNKTEEIDECNLM 155 (1050)
Q Consensus 78 c~~~~~~~n~~~c~~~~g-~~~C-~C~~G~~g~~~~C~d~~eC~~~~~~C~~~~~C~n~~gs~~~~~~g~~~di~eC~~~ 155 (1050)
|..++|. ++++|.++.+ +|+| .|++||+|++..|++|+||+.+++.|.++
T Consensus 6 C~~nPC~-~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~g--------------------------- 57 (634)
T 1yo8_A 6 CLSNPCF-PGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFST--------------------------- 57 (634)
T ss_dssp GGGCCSC-TTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCC---------------------------
T ss_pred cCCCCCC-CCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCC---------------------------
Confidence 5667764 6778888875 5999 99999999988999999998655556554
Q ss_pred CCCCCCC---eeecCCCCeEee-CCCCCeeCCCCCCCc--cCCccCCCCCCCCCCcccccCCCCccccCCCccccCCCce
Q psy18237 156 PNMCNHG---TCMNTPGSFHCQ-CNRGFLYDSDTHQCI--DINECEEMPEICGSGTYINECEEMPEICGSGTCENNIGSF 229 (1050)
Q Consensus 156 ~~~C~~~---~C~~~~g~y~C~-C~~Gy~~~~~g~~C~--d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~g~~ 229 (1050)
+ +|+|+.++|+|. |++||+|. .|+ .+.... ....
T Consensus 58 ------g~~~~CvNt~gsY~C~~C~~Gy~G~----~c~g~g~~~~~------------------------------~dg~ 97 (634)
T 1yo8_A 58 ------SKVPRCVNTQPGFHCLPCPPRYRGN----QPVGVGLEAAK------------------------------TEKQ 97 (634)
T ss_dssp ------SSSCCEEECSSSEEECCCCTTEEEC----CCEESSSHHHH------------------------------SCCC
T ss_pred ------ccccceeeccCceecccCCCCcccC----ccccccccccc------------------------------cCCC
Confidence 4 688888899999 99999954 332 111111 1122
Q ss_pred eecccccccCCCCCCCC-CceecCC----CCeEEEcCCCCccCCCCCCCcC---CCccccCCCCCCCCCCceecCCCCCC
Q psy18237 230 SCRYINECEEMPEICGS-GTCENNI----GSFSCRCEDGYSVKPAEGPACT---DENECTMRTHNCDDNADCINNPVNKT 301 (1050)
Q Consensus 230 ~c~~~~eC~~~~~~C~~-~~C~~~~----g~y~C~C~~Gy~g~~~~~~~C~---~ideC~~~~~~C~~~~~C~n~~g~~~ 301 (1050)
.|++|+||...++.|.+ ++|+++. ++|+|+|++||+|+ ++.|+ +||||....+.|..++
T Consensus 98 ~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~Gd---G~~Ce~d~DiDeC~~~~~~C~~~~---------- 164 (634)
T 1yo8_A 98 VCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGD---GLICGEDSDLDGWPNLNLVCATNA---------- 164 (634)
T ss_dssp CEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEES---SSSEEECTTSSSSCSSCCTTTTTC----------
T ss_pred cccccccccCCCcccccCccccccccccccceeeeccCCcccc---CcccccccCcccccCCCCcccCCC----------
Confidence 35667777766667874 8999998 99999999999996 67885 8888876555554210
Q ss_pred CCCcccCccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCccc
Q psy18237 302 GTRCVDIDECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECI 348 (1050)
Q Consensus 302 g~~C~dideC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~ 348 (1050)
...|....|.+++++|+ ++|.+...+..|.
T Consensus 165 -------------~y~C~~dnC~~~pns~q----~D~D~dG~Gd~Cd 194 (634)
T 1yo8_A 165 -------------TYHCIKDNCPHLPNSGQ----EDFDKDGIGDACD 194 (634)
T ss_dssp -------------SSSCSCCSSTTSCCTTC----CCSSCSSSCTTTC
T ss_pred -------------CccccccccccccCccc----CCccccccccccc
Confidence 12344456777777776 5565544555554
No 13
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.65 E-value=4e-16 Score=153.95 Aligned_cols=116 Identities=33% Similarity=0.835 Sum_probs=90.7
Q ss_pred ccccCCCCCCC-CCeeecCC--CCeEeeCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccccCC
Q psy18237 150 DECNLMPNMCN-HGTCMNTP--GSFHCQCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCENNI 226 (1050)
Q Consensus 150 ~eC~~~~~~C~-~~~C~~~~--g~y~C~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~ 226 (1050)
|+|. +++|. +|+|+++. |+|+|.|++||+ |..|+++.++....
T Consensus 1 d~C~--~~pC~~~g~C~~~~~~g~~~C~C~~G~~----G~~C~~~~~~~~~~---------------------------- 46 (143)
T 4d90_A 1 DICD--PNPCENGGICLPGLADGSFSCECPDGFT----DPNCSSVVEVASDE---------------------------- 46 (143)
T ss_dssp --CC--SCCCGGGCEEEC-----CCEEECCTTCC----TTTTCSCCCCTTTT----------------------------
T ss_pred CcCC--CCcCCCCCEeeCCCCCCCEEeECCCCCC----CCCCccCccccccc----------------------------
Confidence 4666 67887 58999876 689999999998 77899877765421
Q ss_pred CceeecccccccCCCCCCCC-Ccee-------cCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCC
Q psy18237 227 GSFSCRYINECEEMPEICGS-GTCE-------NNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPV 298 (1050)
Q Consensus 227 g~~~c~~~~eC~~~~~~C~~-~~C~-------~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g 298 (1050)
..|.++++|.. ++|.+ ++|+ ++.++|+|+|++||+|.
T Consensus 47 --~~c~~~~~C~~--~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~------------------------------- 91 (143)
T 4d90_A 47 --EEPTSAGPCTP--NPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGI------------------------------- 91 (143)
T ss_dssp --TSCCCCCTTSS--CCCCTTCEEEECCCEETTEECCEEEECCTTEEST-------------------------------
T ss_pred --cccccCCcCCC--CCCCCCCEecCCCccccCCCCCeEeECcCCCcCC-------------------------------
Confidence 22456788875 44875 8999 78899999999999886
Q ss_pred CCCCCCcc-cCccCcCCCCCCCC-CeEeecCCceEEeCCCCCeeC
Q psy18237 299 NKTGTRCV-DIDECATSIQRCGE-GFCVNDVGTYHCVCPDGYMLL 341 (1050)
Q Consensus 299 ~~~g~~C~-dideC~~~~~~C~~-~~C~n~~Gsy~C~C~~G~~g~ 341 (1050)
.|+ +||||+. .+|.+ ++|+++.|+|+|.|++||+|.
T Consensus 92 -----~C~~~i~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~G~ 129 (143)
T 4d90_A 92 -----HCQHNINECEV--EPCKNGGICTDLVANYSCECPGEFMGR 129 (143)
T ss_dssp -----TSCEECCTTTT--CCSCTTCEEEEETTEEEEECCTTCBST
T ss_pred -----CcccCCCcCCC--CCCCCCCEeECCCCCeEeECCCCCccC
Confidence 566 7788874 46988 999999999999999999994
No 14
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.63 E-value=5.6e-17 Score=154.16 Aligned_cols=111 Identities=32% Similarity=0.739 Sum_probs=85.3
Q ss_pred cccccccCCCCCCCCCeeecC-CCCeEeeCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccccC
Q psy18237 147 EEIDECNLMPNMCNHGTCMNT-PGSFHCQCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCENN 225 (1050)
Q Consensus 147 ~di~eC~~~~~~C~~~~C~~~-~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~ 225 (1050)
+|||||+ .++|++ +|+++ +|+|+|.|++||+|.. + ++++|.. +|.+
T Consensus 2 ~dideC~--~~pC~~-~C~~~~~g~y~C~C~~Gy~g~~----~-~~~~C~~---~C~~---------------------- 48 (118)
T 1dx5_I 2 EPVDPCF--RANCEY-QCQPLDQTSYLCVCAEGFAPIP----H-EPHRCQM---FCNQ---------------------- 48 (118)
T ss_dssp CCCCGGG--GCCCSS-EEEECSSSCEEEECCTTEEEET----T-EEEEEEE---CCCS----------------------
T ss_pred CccccCC--CCCCCC-CCCCCCCCCEEeECCCCccccC----C-CCCcccc---ccCC----------------------
Confidence 4789997 788986 99999 9999999999999652 1 4566643 1222
Q ss_pred CCceeecccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCc
Q psy18237 226 IGSFSCRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRC 305 (1050)
Q Consensus 226 ~g~~~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C 305 (1050)
+.|. ++|++ .++|+|+|++||+++. |..|
T Consensus 49 ----------------~~C~-~~C~~-~~~y~C~C~~Gy~~~~---------------------------------g~~C 77 (118)
T 1dx5_I 49 ----------------TACP-ADCDP-NTQASCECPEGYILDD---------------------------------GFIC 77 (118)
T ss_dssp ----------------SEEE-CEECT-TSTTCEECCTTEEEET---------------------------------TTEE
T ss_pred ----------------CCCC-CcccC-CCCeEeECCCCccCCC---------------------------------CCcc
Confidence 2233 57888 5899999999999761 3356
Q ss_pred ccCccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCC
Q psy18237 306 VDIDECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPS 343 (1050)
Q Consensus 306 ~dideC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~ 343 (1050)
+|||||+. .++| +++|+|++|+|+|.|++||+|..+
T Consensus 78 ~dideC~~-~~~C-~~~C~n~~g~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 78 TDIDECEN-GGFC-SGVCHNLPGTFECICGPDSALAGQ 113 (118)
T ss_dssp EECCHHHH-CSSC-SSEEEECSSSEEEEECSSSSCEEE
T ss_pred ccccccCC-CCCC-cCeEEeCCCCEEEECCCCCccCCC
Confidence 77777765 3568 689999999999999999998654
No 15
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.59 E-value=9e-16 Score=137.16 Aligned_cols=86 Identities=41% Similarity=0.952 Sum_probs=73.1
Q ss_pred cccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcccCccC
Q psy18237 232 RYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVDIDEC 311 (1050)
Q Consensus 232 ~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~dideC 311 (1050)
+|||||+.+++.|.+++|+|+.|+|+|.|++||++... .|..|+|||||
T Consensus 1 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~-------------------------------~g~~C~dideC 49 (86)
T 1lmj_A 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFM-------------------------------MMKNCMDIDEC 49 (86)
T ss_dssp CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTT-------------------------------TSSSEEECCHH
T ss_pred CccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCC-------------------------------CCCccCCcccc
Confidence 47999999888898889999999999999999997521 24567788888
Q ss_pred cCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCccc
Q psy18237 312 ATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECI 348 (1050)
Q Consensus 312 ~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~ 348 (1050)
+..+..|.+++|+|+.|+|+|.|++||++..+++.|+
T Consensus 50 ~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 50 QRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86 (86)
T ss_dssp HHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred cCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCccC
Confidence 7766678779999999999999999999988777663
No 16
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.58 E-value=1.3e-16 Score=158.25 Aligned_cols=144 Identities=38% Similarity=0.902 Sum_probs=96.5
Q ss_pred ccCccccCCCCCCCCCeeecCCCceEEecCCCeEeCCCCCccccCcc--ccccCCCCCccccCcccchhhhhcccCCcCC
Q psy18237 575 IDLDECRMMSYLCRNGRCRNNIGSFFCECLQGYTLASEGQYCRDVDE--CKEVNKRESRCYLDTEEEEEEEEEEEGGYGG 652 (1050)
Q Consensus 575 ~dideC~~~~~~C~ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~~~~e--C~~~~~~~~~C~~~~~~c~~~~c~~~g~~~~ 652 (1050)
+|||||+. ++|.||+|++++|+|+|.|++||+++..+..|+++.. |.... .+.+|..++++|..
T Consensus 2 ~dideC~~--~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~-~g~~C~~~~~~c~~----------- 67 (147)
T 2w86_A 2 ADIDECES--SPCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTV-IDGRCEININGATL----------- 67 (147)
T ss_dssp CCCCGGGG--CCSBTSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEE-ETTEEEEEEEEEEC-----------
T ss_pred CcCccCcC--CCCCCCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCC-CCCccccCCCcccc-----------
Confidence 58999997 7899999999999999999999999888888886532 11100 01223222222210
Q ss_pred CCCccccccCCCCCCCcceeecCCCCccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCEEeecCCCeEEe
Q psy18237 653 GSRRVTCTKEIAGSTTRSTCCCSIGKAWGPQCEECPAVGSDEHKTLCPGGSGYRPNSATREGICPSPGKCQNVMGSFICT 732 (1050)
Q Consensus 653 ~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~c~~~~~~~~~~~Cp~g~g~~~~~~~~~~~C~~~g~C~~~~gsy~C~ 732 (1050)
...|....+..|+.. |. . -.|.|+
T Consensus 68 ----------------~~~C~~~~g~~~g~~--------------------------------C~---~-----c~~~C~ 91 (147)
T 2w86_A 68 ----------------KSQCCSSLGAAWGSP--------------------------------CT---L-----CQVDPI 91 (147)
T ss_dssp ----------------HHHHHTTTCSEETTT--------------------------------TE---E-----CCCCTT
T ss_pred ----------------CCccccCcCcccCCC--------------------------------cc---c-----CCCccc
Confidence 001111111112221 21 1 136789
Q ss_pred CCCCcccCCCCCcccccccccCCCCCCCCCCCCCCCccCCCCCCCCCCeEEeCCCCeeeeCCCCceeCCCCCccc
Q psy18237 733 CPPGYRLSPDKNSCQEDFAKLCPEGVGRGDKGEDLNECALMPSACQGGECINTDGSYRCECPAGYVKDETGKICI 807 (1050)
Q Consensus 733 C~~Gy~g~~~~~~C~~~~~c~C~~g~~~~~~~~~ideC~~~~~~C~~g~C~~~~gsy~C~C~~Gy~~~~~g~~C~ 807 (1050)
|++||++. .++.|+ +||||...++.|.+++|+++.++|+|.|++||+++..++.|+
T Consensus 92 C~~Gy~~~-~g~~C~------------------dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 92 CGKGYSRI-KGTQCE------------------DIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp TCTTEEEE-ETTEEE------------------ECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred CCCccccC-CCCccC------------------ccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 99999752 234554 899999878889988999999999999999999887777763
No 17
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.57 E-value=4.4e-15 Score=146.41 Aligned_cols=126 Identities=29% Similarity=0.703 Sum_probs=98.1
Q ss_pred CCCC-CccccCCCceeeecCCCceeCC-----CCCCcccCCccCCCC-CCCC-CCEEeeCCCCeEEecCCCceeCCCCCC
Q psy18237 871 ICAN-GDCANFQGSFQCTCANGYTLNT-----ARDSCVDIDECARHP-NICN-NGTCVNAIGSFKCHCYAGFKLSHNNDC 942 (1050)
Q Consensus 871 ~C~n-g~C~~~~gsy~C~C~~Gy~g~~-----~~~~C~~ideC~~~~-~~C~-~g~C~n~~g~y~C~C~~Gy~g~~~~~C 942 (1050)
+|.+ ++|++. |+|.|++||+|.. ....|++||+|.... ..|. +++|+++.++|+|.|++||+|.....
T Consensus 8 ~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~- 83 (143)
T 2bou_A 8 WCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAK- 83 (143)
T ss_dssp TCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCS-
T ss_pred cCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcc-
Confidence 4774 889875 8999999999852 346799999999752 2488 78999999999999999999986320
Q ss_pred ccccccCCCCCCCCCcCCCeeccCCCCCCccCCCCC-CCCCC-CCCeEeecCCceeeeCCCCCeeCCCCCcccccccCCc
Q psy18237 943 IGNCTDINECESPQACLYGNCTNTLGSNCTDINECE-SPQAC-LYGNCTNTLGSFSCTCPPNYQLTPAGNACVVLEDINE 1020 (1050)
Q Consensus 943 ~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~di~eC~-~~~~C-~~g~C~~~~g~y~C~C~~Gy~~~~~g~~C~~~~dide 1020 (1050)
.+.+..+..|++|+||. ...+| ++++|+++.++|+|.|++||++..+++.| ..+++
T Consensus 84 -------------------~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C---~~~~~ 141 (143)
T 2bou_A 84 -------------------TFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNN---QKDTV 141 (143)
T ss_dssp -------------------CBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSS---BTTCC
T ss_pred -------------------ccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccC---ccCCc
Confidence 01112234567888886 45789 66899999999999999999999988889 67777
Q ss_pred cc
Q psy18237 1021 CE 1022 (1050)
Q Consensus 1021 C~ 1022 (1050)
|+
T Consensus 142 C~ 143 (143)
T 2bou_A 142 CE 143 (143)
T ss_dssp BC
T ss_pred cC
Confidence 63
No 18
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.55 E-value=1.2e-14 Score=143.27 Aligned_cols=116 Identities=34% Similarity=0.867 Sum_probs=90.3
Q ss_pred CccCCCCCCCC-CCEEeeCC--CCeEEecCCCceeCCCCCCccccccCCCCCCCCCcCCCeeccCCCCCCccCCCCCCCC
Q psy18237 905 DECARHPNICN-NGTCVNAI--GSFKCHCYAGFKLSHNNDCIGNCTDINECESPQACLYGNCTNTLGSNCTDINECESPQ 981 (1050)
Q Consensus 905 deC~~~~~~C~-~g~C~n~~--g~y~C~C~~Gy~g~~~~~C~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~di~eC~~~~ 981 (1050)
|+|..++ |. +++|++.. ++|+|.|++||+|.. |+ .+.++.. ....|.++++| ...
T Consensus 1 d~C~~~p--C~~~g~C~~~~~~g~~~C~C~~G~~G~~---C~----~~~~~~~------------~~~~c~~~~~C-~~~ 58 (143)
T 4d90_A 1 DICDPNP--CENGGICLPGLADGSFSCECPDGFTDPN---CS----SVVEVAS------------DEEEPTSAGPC-TPN 58 (143)
T ss_dssp --CCSCC--CGGGCEEEC-----CCEEECCTTCCTTT---TC----SCCCCTT------------TTTSCCCCCTT-SSC
T ss_pred CcCCCCc--CCCCCEeeCCCCCCCEEeECCCCCCCCC---Cc----cCccccc------------cccccccCCcC-CCC
Confidence 5677766 88 79999875 689999999999876 54 4444432 12245678889 567
Q ss_pred CC-CCCeEe-------ecCCceeeeCCCCCeeCCCCCcccccccCCcccCCCCCCC-CCeEEecCCCeEeecCCCCcC
Q psy18237 982 AC-LYGNCT-------NTLGSFSCTCPPNYQLTPAGNACVVLEDINECEEHDNICE-NGHCTNTFGSFMCSCQDGFKL 1050 (1050)
Q Consensus 982 ~C-~~g~C~-------~~~g~y~C~C~~Gy~~~~~g~~C~~~~dideC~~~~~~C~-~g~C~n~~gsy~C~C~~Gy~g 1050 (1050)
+| ++++|+ ++.++|+|.|++||+ |..|+ .+|++|+. ++|. +++|+++.++|+|+|++||+|
T Consensus 59 ~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~----G~~C~--~~i~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~G 128 (143)
T 4d90_A 59 PCHNGGTCEISEAYRGDTFIGYVCKCPRGFN----GIHCQ--HNINECEV--EPCKNGGICTDLVANYSCECPGEFMG 128 (143)
T ss_dssp CCCTTCEEEECCCEETTEECCEEEECCTTEE----STTSC--EECCTTTT--CCSCTTCEEEEETTEEEEECCTTCBS
T ss_pred CCCCCCEecCCCccccCCCCCeEeECcCCCc----CCCcc--cCCCcCCC--CCCCCCCEeECCCCCeEeECCCCCcc
Confidence 89 678999 677899999999998 78893 49999975 6899 789999999999999999986
No 19
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.52 E-value=6e-15 Score=140.13 Aligned_cols=108 Identities=34% Similarity=0.778 Sum_probs=87.0
Q ss_pred ccCCccCCCCCCCCCCEEeeC-CCCeEEecCCCceeCCCCCCccccccCCCCCCCCCcCCCeeccCCCCCCccCCCCCCC
Q psy18237 902 VDIDECARHPNICNNGTCVNA-IGSFKCHCYAGFKLSHNNDCIGNCTDINECESPQACLYGNCTNTLGSNCTDINECESP 980 (1050)
Q Consensus 902 ~~ideC~~~~~~C~~g~C~n~-~g~y~C~C~~Gy~g~~~~~C~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~di~eC~~~ 980 (1050)
++||||..++ |. ++|+++ .++|+|.|++||+|... ++++|.. +| ..
T Consensus 2 ~dideC~~~p--C~-~~C~~~~~g~y~C~C~~Gy~g~~~--------~~~~C~~---------------------~C-~~ 48 (118)
T 1dx5_I 2 EPVDPCFRAN--CE-YQCQPLDQTSYLCVCAEGFAPIPH--------EPHRCQM---------------------FC-NQ 48 (118)
T ss_dssp CCCCGGGGCC--CS-SEEEECSSSCEEEECCTTEEEETT--------EEEEEEE---------------------CC-CS
T ss_pred CccccCCCCC--CC-CCCCCCCCCCEEeECCCCccccCC--------CCCcccc---------------------cc-CC
Confidence 3789998766 87 499999 99999999999999752 2333321 12 23
Q ss_pred CCCCCCeEeecCCceeeeCCCCCeeCCCCCcccccccCCcccCCCCCCCCCeEEecCCCeEeecCCCCcC
Q psy18237 981 QACLYGNCTNTLGSFSCTCPPNYQLTPAGNACVVLEDINECEEHDNICENGHCTNTFGSFMCSCQDGFKL 1050 (1050)
Q Consensus 981 ~~C~~g~C~~~~g~y~C~C~~Gy~~~~~g~~C~~~~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g 1050 (1050)
.+|. ++|++ .++|+|.|++||++.. ++.| +|||||+. .++| +++|+++.|+|+|+|++||+|
T Consensus 49 ~~C~-~~C~~-~~~y~C~C~~Gy~~~~-g~~C---~dideC~~-~~~C-~~~C~n~~g~y~C~C~~G~~g 110 (118)
T 1dx5_I 49 TACP-ADCDP-NTQASCECPEGYILDD-GFIC---TDIDECEN-GGFC-SGVCHNLPGTFECICGPDSAL 110 (118)
T ss_dssp SEEE-CEECT-TSTTCEECCTTEEEET-TTEE---EECCHHHH-CSSC-SSEEEECSSSEEEEECSSSSC
T ss_pred CCCC-CcccC-CCCeEeECCCCccCCC-CCcc---ccccccCC-CCCC-cCeEEeCCCCEEEECCCCCcc
Confidence 4454 58888 5899999999999876 8899 79999986 3689 789999999999999999986
No 20
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.51 E-value=1.1e-14 Score=128.83 Aligned_cols=80 Identities=40% Similarity=1.004 Sum_probs=66.7
Q ss_pred ecccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcccCcc
Q psy18237 231 CRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVDIDE 310 (1050)
Q Consensus 231 c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~dide 310 (1050)
|+|||||+. +++|.|++|+|+.++|+|.|++||+++ |..|+||||
T Consensus 2 C~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~~----------------------------------g~~C~dide 46 (82)
T 1emn_A 2 AVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYILA----------------------------------GNECVDTDE 46 (82)
T ss_dssp CCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEEE----------------------------------TTEEEECCG
T ss_pred CCccccCCC-CCCcCCCEEEecCCCEEEECCCCeECC----------------------------------CCccCCccc
Confidence 679999997 667988999999999999999999964 235667777
Q ss_pred CcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCcc
Q psy18237 311 CATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKEC 347 (1050)
Q Consensus 311 C~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C 347 (1050)
|+. .++|.+++|+|+.|+|+|.|++||+|..+ +.|
T Consensus 47 C~~-~~~C~~~~C~n~~g~y~C~C~~G~~g~~~-~~C 81 (82)
T 1emn_A 47 CSV-GNPCGNGTCKNVIGGFECTCEEGFEPGPM-MTC 81 (82)
T ss_dssp GGT-CCTTSSSCEEECSSSEEECCSSSSCCCSS-SCC
T ss_pred ccC-CCCCCCCEeECCCCCEEeECCCCeEeCCC-Ccc
Confidence 764 45787789999999999999999999655 444
No 21
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.50 E-value=1.3e-14 Score=147.17 Aligned_cols=142 Identities=26% Similarity=0.593 Sum_probs=97.9
Q ss_pred CCCCCCCCcCcccccccCC----CCCCcccCCCCCCceeecCCCcccCCCCCCccccCCCCCCCCCCCCeeccCCCCccc
Q psy18237 65 QDTAWLPTFTNVTTLTNVT----STNEYVTGDNVITRWCVCDEGFRGDGYSCEDIDECTDNTNYCDYILLCGSKPGEFMN 140 (1050)
Q Consensus 65 ~~~~c~~g~~g~~c~~~~~----~~n~~~c~~~~g~~~C~C~~G~~g~~~~C~d~~eC~~~~~~C~~~~~C~n~~gs~~~ 140 (1050)
....|.+||+|.+|+..+- ..+.++|+. +++|+|++||+|+ .|+. ++|.. .|.
T Consensus 17 ~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~--~C~~-~~C~~---~C~-------------- 73 (169)
T 2vj2_A 17 SAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQ---NGNKTCMEGWMGP--ECNR-AICRQ---GCS-------------- 73 (169)
T ss_dssp ----CCTTEETTTTCEECCCEEETTEEEEECS---SCCEEECTTEEST--TSCE-ECCCT---TCC--------------
T ss_pred eeeeCCCcCcCCCcccccCCCCCcCCCCEeCC---CCeeECCCCCcCC--CCCC-CCCCC---CCC--------------
Confidence 4568999999999985332 123456643 4568999999997 7863 44542 122
Q ss_pred CCCCCccccccccCCCCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCC
Q psy18237 141 PMTNKTEEIDECNLMPNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSG 220 (1050)
Q Consensus 141 ~~~g~~~di~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~ 220 (1050)
+.||+|++ +|+|+|++||+ |..|+ +|...
T Consensus 74 ------------------~~~g~C~~---~~~C~C~~G~~----G~~C~---~C~~~----------------------- 102 (169)
T 2vj2_A 74 ------------------PKHGSCKL---PGDCRCQYGWQ----GLYCD---KCIPH----------------------- 102 (169)
T ss_dssp ------------------TTTEECSS---TTCCEECTTEE----SSSSC---EECCC-----------------------
T ss_pred ------------------CCCcccCC---CCeeECCCCCC----CCCcc---cCCCC-----------------------
Confidence 12466765 47899999999 66675 34321
Q ss_pred ccccCCCceeecccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCC
Q psy18237 221 TCENNIGSFSCRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNK 300 (1050)
Q Consensus 221 ~C~~~~g~~~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~ 300 (1050)
..|.|++|+ ++|+|+|++||+|.
T Consensus 103 ---------------------~~C~~g~C~---~~~~C~C~~G~~G~--------------------------------- 125 (169)
T 2vj2_A 103 ---------------------PGCVHGICN---EPWQCLCETNWGGQ--------------------------------- 125 (169)
T ss_dssp ---------------------TTCSSEECS---STTCCEECTTEETT---------------------------------
T ss_pred ---------------------CCCCCCCcC---CCCEEeCCCCCCCC---------------------------------
Confidence 114455666 57899999999986
Q ss_pred CCCCcc-cCccCcCCCCCCCC-CeEeec-CCceEEeCCCCCeeC
Q psy18237 301 TGTRCV-DIDECATSIQRCGE-GFCVND-VGTYHCVCPDGYMLL 341 (1050)
Q Consensus 301 ~g~~C~-dideC~~~~~~C~~-~~C~n~-~Gsy~C~C~~G~~g~ 341 (1050)
.|+ +|+||.. ..+|++ |+|+++ +++|+|+|++||+|.
T Consensus 126 ---~C~~~~~~C~~-~~~C~~~g~C~~~~~~~~~C~C~~G~~G~ 165 (169)
T 2vj2_A 126 ---LCDKDLNYCGT-HQPCLNGGTCSNTGPDKYQCSCPEGYSGP 165 (169)
T ss_dssp ---TTCEESCHHHH-TCCCCTTCEEEECSTTCEEEECCTTCCST
T ss_pred ---cccCCCCCCCC-CCCCCCCCEEcCCCCCCcEeECCCCCcCc
Confidence 465 6777765 357988 999997 899999999999994
No 22
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.43 E-value=5e-14 Score=142.70 Aligned_cols=148 Identities=26% Similarity=0.573 Sum_probs=100.0
Q ss_pred CCceEEecCCCCcCCCCCCccccccCCCCCCCccCccccCCCCCCC-CCccccCCCceeeecCCCceeCCCCCCcccCCc
Q psy18237 828 NGGFECTCSEGYAPGPLGSCAILLTLPPISPSTDIDECYERPGICA-NGDCANFQGSFQCTCANGYTLNTARDSCVDIDE 906 (1050)
Q Consensus 828 ~g~~~C~C~~Gy~g~~~~~C~~~~~~~~~~~C~~~~eC~~~~~~C~-ng~C~~~~gsy~C~C~~Gy~g~~~~~~C~~ide 906 (1050)
...++|+|++||+|.. |+ .+|... ..|. +++|.. ..+|+|++||+|..+. +++
T Consensus 14 ~~~~~c~C~~g~~G~~---------------C~--~~C~~~-~~c~~~g~C~~---~g~C~C~~G~~G~~C~-----~~~ 67 (169)
T 2vj2_A 14 EGRSAVTCDDYYYGFG---------------CN--KFCRPR-DDFFGHYACDQ---NGNKTCMEGWMGPECN-----RAI 67 (169)
T ss_dssp -------CCTTEETTT---------------TC--EECCCE-EETTEEEEECS---SCCEEECTTEESTTSC-----EEC
T ss_pred ccCeeeeCCCcCcCCC---------------cc--cccCCC-CCcCCCCEeCC---CCeeECCCCCcCCCCC-----CCC
Confidence 4567899999999972 22 134321 1254 378864 3589999999986543 245
Q ss_pred cCCCCCCCCCCEEeeCCCCeEEecCCCceeCCCCCCccccccCCCCCCCCCcCCCeeccCCCCCCccCCCCCCCCCCCCC
Q psy18237 907 CARHPNICNNGTCVNAIGSFKCHCYAGFKLSHNNDCIGNCTDINECESPQACLYGNCTNTLGSNCTDINECESPQACLYG 986 (1050)
Q Consensus 907 C~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~C~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~di~eC~~~~~C~~g 986 (1050)
|.. ...+.++.|++ .|+|+|++||+|.. |+ +|.....|.+|
T Consensus 68 C~~-~C~~~~g~C~~---~~~C~C~~G~~G~~---C~--------------------------------~C~~~~~C~~g 108 (169)
T 2vj2_A 68 CRQ-GCSPKHGSCKL---PGDCRCQYGWQGLY---CD--------------------------------KCIPHPGCVHG 108 (169)
T ss_dssp CCT-TCCTTTEECSS---TTCCEECTTEESSS---SC--------------------------------EECCCTTCSSE
T ss_pred CCC-CCCCCCcccCC---CCeeECCCCCCCCC---cc--------------------------------cCCCCCCCCCC
Confidence 653 21124788875 57999999999876 33 11112236566
Q ss_pred eEeecCCceeeeCCCCCeeCCCCCcccccccCCcccCCCCCCC-CCeEEec-CCCeEeecCCCCcC
Q psy18237 987 NCTNTLGSFSCTCPPNYQLTPAGNACVVLEDINECEEHDNICE-NGHCTNT-FGSFMCSCQDGFKL 1050 (1050)
Q Consensus 987 ~C~~~~g~y~C~C~~Gy~~~~~g~~C~~~~dideC~~~~~~C~-~g~C~n~-~gsy~C~C~~Gy~g 1050 (1050)
+|+ ++|+|+|++||+ |..|+ .+|++|.. ..+|. +|+|+++ .++|+|+|++||+|
T Consensus 109 ~C~---~~~~C~C~~G~~----G~~C~--~~~~~C~~-~~~C~~~g~C~~~~~~~~~C~C~~G~~G 164 (169)
T 2vj2_A 109 ICN---EPWQCLCETNWG----GQLCD--KDLNYCGT-HQPCLNGGTCSNTGPDKYQCSCPEGYSG 164 (169)
T ss_dssp ECS---STTCCEECTTEE----TTTTC--EESCHHHH-TCCCCTTCEEEECSTTCEEEECCTTCCS
T ss_pred CcC---CCCEEeCCCCCC----CCccc--CCCCCCCC-CCCCCCCCEEcCCCCCCcEeECCCCCcC
Confidence 777 679999999999 77893 48999975 36899 7899997 89999999999986
No 23
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.39 E-value=3e-13 Score=119.44 Aligned_cols=74 Identities=46% Similarity=1.105 Sum_probs=65.2
Q ss_pred CccCCCCCCCCCCCCCeEeecCCceeeeCCCCCeeCCCCCcccccccCCcccCCCCCCCCCeEEecCCCeEeecCCCCcC
Q psy18237 971 CTDINECESPQACLYGNCTNTLGSFSCTCPPNYQLTPAGNACVVLEDINECEEHDNICENGHCTNTFGSFMCSCQDGFKL 1050 (1050)
Q Consensus 971 C~di~eC~~~~~C~~g~C~~~~g~y~C~C~~Gy~~~~~g~~C~~~~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g 1050 (1050)
|+|||||+.+.+|.+|+|+++.++|+|.|++||+++ |..| +|||||+. +++|.+++|+|+.|+|+|.|++||+|
T Consensus 2 C~dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~--g~~C---~dideC~~-~~~C~~~~C~n~~g~y~C~C~~G~~g 75 (82)
T 1emn_A 2 AVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILA--GNEC---VDTDECSV-GNPCGNGTCKNVIGGFECTCEEGFEP 75 (82)
T ss_dssp CCCCCSSSSTTSCSSSEECCCSSCCCEECCTTEEEE--TTEE---EECCGGGT-CCTTSSSCEEECSSSEEECCSSSSCC
T ss_pred CCccccCCCCCCcCCCEEEecCCCEEEECCCCeECC--CCcc---CCcccccC-CCCCCCCEeECCCCCEEeECCCCeEe
Confidence 567888865578877899999999999999999974 7889 89999985 47899889999999999999999986
No 24
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.36 E-value=5.8e-13 Score=118.86 Aligned_cols=75 Identities=43% Similarity=0.948 Sum_probs=64.6
Q ss_pred cCCCCC-CCCCCCCCeEeecCCceeeeCCCCCeeCC-CCCcccccccCCcccCCCCCCCCCeEEecCCCeEeecCCCCcC
Q psy18237 973 DINECE-SPQACLYGNCTNTLGSFSCTCPPNYQLTP-AGNACVVLEDINECEEHDNICENGHCTNTFGSFMCSCQDGFKL 1050 (1050)
Q Consensus 973 di~eC~-~~~~C~~g~C~~~~g~y~C~C~~Gy~~~~-~g~~C~~~~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g 1050 (1050)
|||||+ .+.+|.+++|+++.++|+|.|++||++.. .++.| +|||||+..+..|.+++|+|+.|+|+|.|++||+|
T Consensus 2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C---~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC---MDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSE---EECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCC
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCcc---CCcccccCCCCcCCCCEeEcCCCCEEEECcCCccc
Confidence 677885 34568777999999999999999999753 47889 79999988766788789999999999999999986
No 25
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.35 E-value=5.1e-13 Score=149.26 Aligned_cols=146 Identities=32% Similarity=0.781 Sum_probs=64.8
Q ss_pred CCC-CCCeEecCCCceEEecCCCCcCCCCCCccccccCCCCCCCccCccccCCCCCCCC-CccccCCCceeeecCCCcee
Q psy18237 817 NIC-GNGTCTNLNGGFECTCSEGYAPGPLGSCAILLTLPPISPSTDIDECYERPGICAN-GDCANFQGSFQCTCANGYTL 894 (1050)
Q Consensus 817 ~~C-~~g~C~~~~g~~~C~C~~Gy~g~~~~~C~~~~~~~~~~~C~~~~eC~~~~~~C~n-g~C~~~~gsy~C~C~~Gy~g 894 (1050)
.+| ++|+|.+ .++|.|++||+|. .|+. +.|.. .|.+ ++|+. .++|.|++||+|
T Consensus 153 ~~C~~~G~C~~---~~~C~C~~G~~G~---------------~C~~-~~C~~---~C~~~G~C~~---~~~C~C~~G~~G 207 (324)
T 2ygq_A 153 GGCRNGGFCNE---RRICECPDGFHGP---------------HCEK-ALCTP---RCMNGGLCVT---PGFCICPPGFYG 207 (324)
T ss_dssp SCCCSSCEECT---TSCEECCTTEESS---------------SSCE-ESSSS---CCCTTCEECS---SCCEECCTTCBT
T ss_pred CCCCCCCEECC---CCeEECCCCCcCC---------------CCCC-CCCCC---CCCCCCEEcC---CCEEeCCCCccC
Confidence 678 7899976 4789999999997 2322 34542 4875 89976 479999999998
Q ss_pred CCCCCCcccCCccCCCCCCCC-CCEEeeCCCCeEEecCCCceeCCCCCCccccccCCCCCCCCCcCCCeeccCCCCCCcc
Q psy18237 895 NTARDSCVDIDECARHPNICN-NGTCVNAIGSFKCHCYAGFKLSHNNDCIGNCTDINECESPQACLYGNCTNTLGSNCTD 973 (1050)
Q Consensus 895 ~~~~~~C~~ideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~g~~~~~C~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~d 973 (1050)
..+. .+.|.. + |. +|+|++. ++|.|++||+|.. |+
T Consensus 208 ~~C~-----~~~C~~-~--C~~~G~C~~~---~~C~C~~G~~G~~---C~------------------------------ 243 (324)
T 2ygq_A 208 VNCD-----KANCST-T--CFNGGTCFYP---GKCICPPGLEGEQ---CE------------------------------ 243 (324)
T ss_dssp TTTC-----BCCCSS-C--CCSSCCBSCS---SCBCCCTTCCTTT---TC------------------------------
T ss_pred CCcc-----cCcCCC-C--CCCCCeeCCC---CeeeCCCCccCCC---CC------------------------------
Confidence 6543 245642 3 77 7899763 6899999999875 43
Q ss_pred CCCCCCCCCC-CCCeEeecCCceeeeCCCCCeeCCCCCcccccccCCcccCCCCCCC-CCeEEecCCCeEeecCCCCcC
Q psy18237 974 INECESPQAC-LYGNCTNTLGSFSCTCPPNYQLTPAGNACVVLEDINECEEHDNICE-NGHCTNTFGSFMCSCQDGFKL 1050 (1050)
Q Consensus 974 i~eC~~~~~C-~~g~C~~~~g~y~C~C~~Gy~~~~~g~~C~~~~dideC~~~~~~C~-~g~C~n~~gsy~C~C~~Gy~g 1050 (1050)
+++| ..+| ++|+|+. .++|.|++||+ |..| ++++|. .+|. +|+|++ +|+|+|++||+|
T Consensus 244 ~~~C--~~~C~~~g~C~~---~~~C~C~~G~~----G~~C----~~~~C~---~~C~~~g~C~~---~~~C~C~~G~~G 303 (324)
T 2ygq_A 244 ISKC--PQPCRNGGKCIG---KSKCKCSKGYQ----GDLC----SKPVCE---PGCGAHGTCHE---PNKCQCQEGWHG 303 (324)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred cCcC--CCcCCCCCEECC---CCEEECCCCCc----CCCC----cCCCCC---CCCCCCCEECC---CCEeECCCCCcC
Confidence 2234 1456 5678873 57999999999 6778 356785 4798 899986 579999999986
No 26
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.34 E-value=3.5e-13 Score=120.50 Aligned_cols=84 Identities=38% Similarity=0.930 Sum_probs=68.8
Q ss_pred cccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcccCccC
Q psy18237 232 RYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVDIDEC 311 (1050)
Q Consensus 232 ~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~dideC 311 (1050)
+|||||+.++..|.+++|+++.++|+|.|++||++.. +|..|+|||||
T Consensus 1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~--------------------------------~g~~C~dideC 48 (87)
T 1z6c_A 1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNL--------------------------------KSKSCEDIDEC 48 (87)
T ss_dssp CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEET--------------------------------TTTEEECCCHH
T ss_pred CccccccCCCCCCCCCEeECCCCCEEEECCCCceECC--------------------------------CCCcCCCcCee
Confidence 4799999988888558999999999999999999862 34567777788
Q ss_pred cCCCCCCCCCeEeecCCceEEeC--CCCCeeCCCCCccccc
Q psy18237 312 ATSIQRCGEGFCVNDVGTYHCVC--PDGYMLLPSGKECIDM 350 (1050)
Q Consensus 312 ~~~~~~C~~~~C~n~~Gsy~C~C--~~G~~g~~~~~~C~d~ 350 (1050)
+. ++|+ ++|+|++|+|+|.| .+||....+++.|.||
T Consensus 49 ~~--~~C~-~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~di 86 (87)
T 1z6c_A 49 SE--NMCA-QLCVNYPGGYTCYCDGKKGFKLAQDQKSCEVV 86 (87)
T ss_dssp HH--SCCS-SEECCCSSSCCEECCSSSCCBCCTTSSSCBCC
T ss_pred CC--CCCC-CEEEccCCCEEEECCCCcCCcccCCCCcceEC
Confidence 64 4687 79999999999999 4777776677777665
No 27
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.33 E-value=7.8e-13 Score=147.76 Aligned_cols=151 Identities=32% Similarity=0.820 Sum_probs=66.8
Q ss_pred CCCCCCCCEEeecCCCeEEeCCCCcccCCCCCcccccccccCCCCCCCCCCCCCCCccCCCCCCCC-CCeEEeCCCCeee
Q psy18237 713 EGICPSPGKCQNVMGSFICTCPPGYRLSPDKNSCQEDFAKLCPEGVGRGDKGEDLNECALMPSACQ-GGECINTDGSYRC 791 (1050)
Q Consensus 713 ~~~C~~~g~C~~~~gsy~C~C~~Gy~g~~~~~~C~~~~~c~C~~g~~~~~~~~~ideC~~~~~~C~-~g~C~~~~gsy~C 791 (1050)
+++|.++|+|++ .|+|+|++||+|.. |+ .+.|. ..|. +|+|++ .++|
T Consensus 152 ~~~C~~~G~C~~---~~~C~C~~G~~G~~----C~-------------------~~~C~---~~C~~~G~C~~---~~~C 199 (324)
T 2ygq_A 152 PGGCRNGGFCNE---RRICECPDGFHGPH----CE-------------------KALCT---PRCMNGGLCVT---PGFC 199 (324)
T ss_dssp SSCCCSSCEECT---TSCEECCTTEESSS----SC-------------------EESSS---SCCCTTCEECS---SCCE
T ss_pred CCCCCCCCEECC---CCeEECCCCCcCCC----CC-------------------CCCCC---CCCCCCCEEcC---CCEE
Confidence 357999999985 47899999999853 32 23453 2476 478976 4789
Q ss_pred eCCCCceeCCCCCccccCCccCCCCCCC-CCCeEecCCCceEEecCCCCcCCCCCCccccccCCCCCCCccCccccCCCC
Q psy18237 792 ECPAGYVKDETGKICIDDNECLSIPNIC-GNGTCTNLNGGFECTCSEGYAPGPLGSCAILLTLPPISPSTDIDECYERPG 870 (1050)
Q Consensus 792 ~C~~Gy~~~~~g~~C~~~~~C~~~~~~C-~~g~C~~~~g~~~C~C~~Gy~g~~~~~C~~~~~~~~~~~C~~~~eC~~~~~ 870 (1050)
.|++||+ |..|+. +.|. .+| ++|+|+.. ++|.|++||+|. .|+ +++|. .
T Consensus 200 ~C~~G~~----G~~C~~-~~C~---~~C~~~G~C~~~---~~C~C~~G~~G~---------------~C~-~~~C~---~ 249 (324)
T 2ygq_A 200 ICPPGFY----GVNCDK-ANCS---TTCFNGGTCFYP---GKCICPPGLEGE---------------QCE-ISKCP---Q 249 (324)
T ss_dssp ECCTTCB----TTTTCB-CCCS---SCCCSSCCBSCS---SCBCCCTTCCTT---------------TTC----------
T ss_pred eCCCCcc----CCCccc-CcCC---CCCCCCCeeCCC---CeeeCCCCccCC---------------CCC-cCcCC---C
Confidence 9999995 788864 3464 678 78999763 689999999997 232 34564 3
Q ss_pred CCCC-CccccCCCceeeecCCCceeCCCCCCcccCCccCCCCCCCC-CCEEeeCCCCeEEecCCCceeCCC
Q psy18237 871 ICAN-GDCANFQGSFQCTCANGYTLNTARDSCVDIDECARHPNICN-NGTCVNAIGSFKCHCYAGFKLSHN 939 (1050)
Q Consensus 871 ~C~n-g~C~~~~gsy~C~C~~Gy~g~~~~~~C~~ideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~g~~~ 939 (1050)
+|.+ ++|+. .++|.|++||+|..++ +++|.. + |. +|+|++ .++|.|++||+|..+
T Consensus 250 ~C~~~g~C~~---~~~C~C~~G~~G~~C~-----~~~C~~-~--C~~~g~C~~---~~~C~C~~G~~G~~C 306 (324)
T 2ygq_A 250 PCRNGGKCIG---KSKCKCSKGYQGDLCS-----KPVCEP-G--CGAHGTCHE---PNKCQCQEGWHGRHC 306 (324)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cCCCCCEECC---CCEEECCCCCcCCCCc-----CCCCCC-C--CCCCCEECC---CCEeECCCCCcCCCC
Confidence 4875 88974 5799999999986543 456752 3 86 889986 479999999999873
No 28
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.32 E-value=6e-13 Score=118.99 Aligned_cols=84 Identities=35% Similarity=1.007 Sum_probs=62.4
Q ss_pred cccccccCCCCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccccCC
Q psy18237 147 EEIDECNLMPNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCENNI 226 (1050)
Q Consensus 147 ~di~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~ 226 (1050)
+|||||+..+.+|.+++|+|++|+|+|.|++||+++.++..|+|||||..
T Consensus 1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~------------------------------ 50 (87)
T 1z6c_A 1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSE------------------------------ 50 (87)
T ss_dssp CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHH------------------------------
T ss_pred CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCC------------------------------
Confidence 36778875444575689999999999999999998877778887777743
Q ss_pred CceeecccccccCCCCCCCCCceecCCCCeEEEcC--CCCccCCCCCCCcCCC
Q psy18237 227 GSFSCRYINECEEMPEICGSGTCENNIGSFSCRCE--DGYSVKPAEGPACTDE 277 (1050)
Q Consensus 227 g~~~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~--~Gy~g~~~~~~~C~~i 277 (1050)
++|. ++|+|+.|+|+|.|+ +||+.. .++..|++|
T Consensus 51 ---------------~~C~-~~C~n~~g~y~C~C~g~~G~~~~-~~~~~C~di 86 (87)
T 1z6c_A 51 ---------------NMCA-QLCVNYPGGYTCYCDGKKGFKLA-QDQKSCEVV 86 (87)
T ss_dssp ---------------SCCS-SEECCCSSSCCEECCSSSCCBCC-TTSSSCBCC
T ss_pred ---------------CCCC-CEEEccCCCEEEECCCCcCCccc-CCCCcceEC
Confidence 2254 589999999999994 666654 234445444
No 29
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.31 E-value=9.7e-13 Score=129.54 Aligned_cols=87 Identities=30% Similarity=0.668 Sum_probs=69.6
Q ss_pred ecccccccCCCCCCCC-CceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcccCc
Q psy18237 231 CRYINECEEMPEICGS-GTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVDID 309 (1050)
Q Consensus 231 c~~~~eC~~~~~~C~~-~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~did 309 (1050)
|+|||||+. ++|.| |+|+++.++|+|.|++||+|. .|+++|
T Consensus 45 c~dideC~~--~pC~n~g~C~~~~~~y~C~C~~G~~G~------------------------------------~C~~~d 86 (146)
T 1x7a_L 45 YVDGDQCEP--NPCLNGGLCKDDINSYECWCQVGFEGK------------------------------------NCELDA 86 (146)
T ss_dssp -----CCSS--CSSCTTCEEEECSSCEEEECCSSEEST------------------------------------TTCEEC
T ss_pred CCCcCcCCC--CCCCCCCEeECCCCCEEEecCCCCcCC------------------------------------cCCCCc
Confidence 889999995 45986 999999999999999999986 466667
Q ss_pred cCcCCCCCCCCCeE-eecCCceEEeCCCCCeeCCCCCccccccccccc
Q psy18237 310 ECATSIQRCGEGFC-VNDVGTYHCVCPDGYMLLPSGKECIDMRRELCY 356 (1050)
Q Consensus 310 eC~~~~~~C~~~~C-~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~ 356 (1050)
||+..+++|.+ +| +|+.|+|+|.|++||++..+++.|.++.+..|.
T Consensus 87 eC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~pCg 133 (146)
T 1x7a_L 87 TCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCG 133 (146)
T ss_dssp CTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSEEECSSSCTT
T ss_pred cccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCCCCC
Confidence 77765567876 99 999999999999999998899999988765543
No 30
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.27 E-value=2.8e-12 Score=120.90 Aligned_cols=92 Identities=30% Similarity=0.698 Sum_probs=68.7
Q ss_pred ecccccccCCC------CCCCC-CceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCC
Q psy18237 231 CRYINECEEMP------EICGS-GTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGT 303 (1050)
Q Consensus 231 c~~~~eC~~~~------~~C~~-~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~ 303 (1050)
++|+|||+.+| ..|.+ |+|+++.++|+|.|++||+|. .|++++
T Consensus 3 ~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~-----~C~~~~------------------------- 52 (114)
T 1aut_L 3 HVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGR-----FCQREV------------------------- 52 (114)
T ss_dssp -----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEEST-----TSCEEC-------------------------
T ss_pred ceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCC-----CcCcCC-------------------------
Confidence 46899999877 44765 899999999999999999987 232221
Q ss_pred CcccCccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCccccccccccc
Q psy18237 304 RCVDIDECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMRRELCY 356 (1050)
Q Consensus 304 ~C~dideC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~ 356 (1050)
+++||+.+++.|.+ +|+|+.|+|+|.|++||+|..+++.|.++.+..|.
T Consensus 53 ---~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~~pC~ 101 (114)
T 1aut_L 53 ---SFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCG 101 (114)
T ss_dssp ---CSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECSSSCTT
T ss_pred ---cCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeECCCCCccCcCcccCCC
Confidence 23467655566775 99999999999999999999999999887664443
No 31
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.27 E-value=1e-11 Score=153.96 Aligned_cols=156 Identities=30% Similarity=0.716 Sum_probs=109.4
Q ss_pred cccccCCCCCCCCCeeecCCCCeEee----CCCCCeeCCCCCCCccCCccC-CCCCCCCCCcccccCCCCccccC-CCcc
Q psy18237 149 IDECNLMPNMCNHGTCMNTPGSFHCQ----CNRGFLYDSDTHQCIDINECE-EMPEICGSGTYINECEEMPEICG-SGTC 222 (1050)
Q Consensus 149 i~eC~~~~~~C~~~~C~~~~g~y~C~----C~~Gy~~~~~g~~C~d~~eC~-~~~~~C~~g~C~~~C~~g~~~c~-~~~C 222 (1050)
+.+|......|.+++|++ ++++|. |.+|.- ...|..+++|. .....|.+|+|++ ....|+ ...|
T Consensus 212 ~~~C~~~~f~C~~g~Ci~--~~~~Cdg~~dC~dgsd----e~~C~~~~~C~~~~~~~C~~g~Ci~----~~~~Cd~~~dC 281 (699)
T 1n7d_A 212 VATCRPDEFQCSDGNCIH--GSRQCDREYDCKDMSD----EVGCVNVTLCEGPNKFKCHSGECIT----LDKVCNMARDC 281 (699)
T ss_dssp CCCCCSSEEESSSSCEEE--TTCCSSSCCCSSSSCS----SSSTTCCCCCCSTTCCCCTTSCCCC----SSCCSCSSCCS
T ss_pred CcccCCCcEecCCCceee--eecccCCCCCCCCCCc----cCCCCCCCcccCCCceecCCCcEeC----Cccccccccee
Confidence 345654444677888987 578887 888874 67888888884 3346788888875 111121 2233
Q ss_pred ccCCCce--eecccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCC
Q psy18237 223 ENNIGSF--SCRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNK 300 (1050)
Q Consensus 223 ~~~~g~~--~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~ 300 (1050)
.+..... .| +++||..++..|. +.|++++++|+|.|++||++. +++
T Consensus 282 ~dgsDe~~~~C-~~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G~~~~--~~~---------------------------- 329 (699)
T 1n7d_A 282 RDWSDEPIKEC-GTNECLDNNGGCS-HVCNDLKIGYECLCPDGFQLV--AQR---------------------------- 329 (699)
T ss_dssp SSSCSCCCSSC-CCCCTTSSTTTSC-TTCCCCTTCCCCCCCSSSCCC--SSS----------------------------
T ss_pred cCccccccccc-ccccccccccCcC-CCcccCCCCcEEeCCCCeEcC--CCC----------------------------
Confidence 3322111 23 6899998777786 489999999999999999983 233
Q ss_pred CCCCcccCccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCcccccc
Q psy18237 301 TGTRCVDIDECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMR 351 (1050)
Q Consensus 301 ~g~~C~dideC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~ 351 (1050)
.|+|||||+. +++|+ ++|+|+.|+|+|.|++||++..++++|.++.
T Consensus 330 ---~C~dideC~~-~~~C~-~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~ 375 (699)
T 1n7d_A 330 ---RCEDIDECQD-PDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKACKAVG 375 (699)
T ss_dssp ---CCCCCCCCSS-SSSCT-TTCCBCSSCBCCCCCSSCBCCSSCCCCBCCS
T ss_pred ---cccCccccCC-CCccc-cccccCCCCeeeeeecccccCCCCCcccccc
Confidence 4555556653 35676 4899999999999999999988888887653
No 32
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.25 E-value=1.3e-12 Score=121.28 Aligned_cols=79 Identities=37% Similarity=0.829 Sum_probs=33.6
Q ss_pred ccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcccCccCc
Q psy18237 233 YINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVDIDECA 312 (1050)
Q Consensus 233 ~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~dideC~ 312 (1050)
+||||+.++..|. ++|+++.++|+|.|++||+|. ++..|+|||||+
T Consensus 28 d~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~---------------------------------~g~~C~dideC~ 73 (107)
T 2w2n_E 28 GTNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLV---------------------------------AQRRCEDIDECQ 73 (107)
T ss_dssp SCCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEE---------------------------------TTTEEEC-----
T ss_pred cCccCcCCCCCCC-CEeEeCCCCeEEECCCCcccc---------------------------------CCCccccccccC
Confidence 6899997767785 589999999999999999995 233567777776
Q ss_pred CCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCcc
Q psy18237 313 TSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKEC 347 (1050)
Q Consensus 313 ~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C 347 (1050)
. +++|. ++|+|+.|+|+|.|++||++..+++.|
T Consensus 74 ~-~~~C~-~~C~n~~gsy~C~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 74 D-PDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKAC 106 (107)
T ss_dssp -----------------------------------
T ss_pred C-CCCcC-CeeecCCCCEEEECCCCceECCCCCcc
Confidence 4 45686 799999999999999999998777665
No 33
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.21 E-value=3e-11 Score=146.48 Aligned_cols=166 Identities=27% Similarity=0.529 Sum_probs=114.4
Q ss_pred ccccCCCccccCCCceeeCCCCCccccccccee---EeeCCCCccCCCCCCCCCCCCCCcc-cc--------chhcccC-
Q psy18237 448 KNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMD---CCCTMGMAWGPQCQLCPTRGSQTCE-DI--------NECLELS- 514 (1050)
Q Consensus 448 eC~~~~~C~~~~~~g~C~~~~g~~~~~~~~~~~---C~C~~Gy~g~~~~~~c~~~~~~~C~-~~--------~eC~~~~- 514 (1050)
+|.. .+|. ++++|.+..| .|. |.|++||+| ..|+ ++ ++|...+
T Consensus 436 ~C~~-~pc~---n~~~C~~g~G--------~~~~G~C~C~~Gy~G------------~~Ce~~~~~~~~~~~~~C~~~~~ 491 (690)
T 3fcs_B 436 ACQA-QAEP---NSHRCNNGNG--------TFECGVCRCGPGWLG------------SQCECSEEDYRPSQQDECSPREG 491 (690)
T ss_dssp GGGT-TCCT---TCTTTTTTSE--------EEETTEEEECTTCCS------------SSSCCSCC------CCCCSSSSS
T ss_pred CCcC-CCCC---CCCcccCCCC--------eEeCCceEeCCCccC------------CceeeccCccCCccCCcCCCCCC
Confidence 5666 7788 8899987777 666 999999999 4443 22 3343100
Q ss_pred -CCccCccccccccCCCcceeeeccccCCccccccCCccccccC----CCCcccccccccccCCcccCccccC-CCCCCC
Q psy18237 515 -NQCAFRCHNISMSVSNSLACALTPVLTRKISMSVSNSLACALT----PVLTRKVATPVAVINDCIDLDECRM-MSYLCR 588 (1050)
Q Consensus 515 -~~C~~~C~n~~~~~~~~~~C~CG~~g~~~~C~~~~~~~~C~C~----~G~~G~~C~~~~~~~~C~dideC~~-~~~~C~ 588 (1050)
.+|.+ . ++|. .++|.|+ +||+|..|+ .++++|.. ...+|.
T Consensus 492 ~~~Cs~----~------------------G~C~----~g~C~C~~~~~~Gy~G~~Ce--------~~~~~C~~~~~~~C~ 537 (690)
T 3fcs_B 492 QPVCSQ----R------------------GECL----CGQCVCHSSDFGKITGKYCE--------CDDFSCVRYKGEMCS 537 (690)
T ss_dssp SCGGGG----S------------------EEEC----SSSEEECCCSSCCCBSTTSC--------BCSSCCCBSSSSBGG
T ss_pred CCCCCC----C------------------CEEE----CCeeEeecCCCCCeeCCCcC--------cccCcCcCCCCCCCC
Confidence 12322 1 2333 1469999 999998887 46778874 235797
Q ss_pred -CCeeecCCCceEEecCCCeEeCCCCCccc---cCccccccCCCCCccccCcccchhhhhcccCCcCCCCCccccccCCC
Q psy18237 589 -NGRCRNNIGSFFCECLQGYTLASEGQYCR---DVDECKEVNKRESRCYLDTEEEEEEEEEEEGGYGGGSRRVTCTKEIA 664 (1050)
Q Consensus 589 -ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~---~~~eC~~~~~~~~~C~~~~~~c~~~~c~~~g~~~~~~~~~~C~~~~~ 664 (1050)
+|+|++ |+|.|++||+ |..|+ ++++|.... + .+| .++++|..
T Consensus 538 ~~G~C~~----g~C~C~~Gy~----G~~CeC~~~~~~C~~~~--g------------~~C---------~~~G~C~~--- 583 (690)
T 3fcs_B 538 GHGQCSC----GDCLCDSDWT----GYYCNCTTRTDTCMSSN--G------------LLC---------SGRGKCEC--- 583 (690)
T ss_dssp GSEEEET----TEEEECTTEE----SSSSCEECCCTTTBCTT--S------------SBT---------SSSCEEET---
T ss_pred CCCEecC----CeeECcCCCc----CCCCccCCCCCcccCCC--C------------CCC---------CCCCEEeC---
Confidence 589987 6899999999 99997 455555321 0 122 45667753
Q ss_pred CCCCcceeec-CCCCccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCEEeecCCCeEEeCCCCcccCC
Q psy18237 665 GSTTRSTCCC-SIGKAWGPQCEECPAVGSDEHKTLCPGGSGYRPNSATREGICPSPGKCQNVMGSFICTCPPGYRLSP 741 (1050)
Q Consensus 665 ~~~~~~~C~C-~~G~~~G~~C~~c~~~~~~~~~~~Cp~g~g~~~~~~~~~~~C~~~g~C~~~~gsy~C~C~~Gy~g~~ 741 (1050)
.+|.| .+|| .|..|+.|+. | +.+|.++++|++ |.+||+|..
T Consensus 584 -----g~C~C~~~Gy-~G~~Ce~C~~---------C-------------~~~C~~~g~Cv~--------C~~g~tG~~ 625 (690)
T 3fcs_B 584 -----GSCVCIQPGS-YGDTCEKCPT---------C-------------PDACTFKKECVE--------CKKFDRGAL 625 (690)
T ss_dssp -----TEEECCSTTC-BSTTSCBCTT---------S-------------CCTTTSCCGGGT--------TTTTCCSSS
T ss_pred -----CEEECCCCCc-cCCCcCcCCC---------C-------------CCCCCCCCCccc--------CCCCCccCC
Confidence 38999 9999 8999987541 1 467999999985 999999863
No 34
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.19 E-value=6.3e-12 Score=122.01 Aligned_cols=87 Identities=29% Similarity=0.761 Sum_probs=38.8
Q ss_pred ecccccccCCCCCCCC-CceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCccc-C
Q psy18237 231 CRYINECEEMPEICGS-GTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVD-I 308 (1050)
Q Consensus 231 c~~~~eC~~~~~~C~~-~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~d-i 308 (1050)
|.+||+|+.+ +|.| |+|+++.++|+|.|++||+|. .|++ |
T Consensus 39 c~d~d~C~~~--pC~n~g~C~~~~~~y~C~C~~G~~G~------------------------------------~C~~~i 80 (134)
T 2vh0_B 39 YKDGDQCETS--PCQNQGKCKDGLGEYTCTCLEGFEGK------------------------------------NCELFT 80 (134)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcCcCCCC--CCCCcCCcccCCCCEEeeCCCCccCC------------------------------------ccccCC
Confidence 7899999964 4986 899999999999999999986 4554 5
Q ss_pred -ccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCccccccccccc
Q psy18237 309 -DECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMRRELCY 356 (1050)
Q Consensus 309 -deC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~ 356 (1050)
|+|...+++|.+ +|+++.|+|+|.|++||++..+++.|.++.+..|.
T Consensus 81 ~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~~pC~ 128 (134)
T 2vh0_B 81 RKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG 128 (134)
T ss_dssp CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCTT
T ss_pred CCccccCCCCCCC-EeECCCCCEEEECCCCcEECCCCCccCcCCCcCCC
Confidence 667655567876 99999999999999999998889999887665554
No 35
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.17 E-value=8.3e-12 Score=127.89 Aligned_cols=88 Identities=28% Similarity=0.745 Sum_probs=39.6
Q ss_pred ecccccccCCCCCCCC-CceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCccc-C
Q psy18237 231 CRYINECEEMPEICGS-GTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVD-I 308 (1050)
Q Consensus 231 c~~~~eC~~~~~~C~~-~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~d-i 308 (1050)
|.|||+|+.+ +|.| |+|+++.++|+|.|++||+|. .|++ |
T Consensus 39 c~dideC~~~--pC~ngg~C~n~~g~y~C~C~~Gf~G~------------------------------------~Ce~~i 80 (195)
T 1nfu_B 39 YKDGDQCETS--PCQNQGKCKDGLGEYTCTCLEGFEGK------------------------------------NCELFT 80 (195)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCcccCCC--CCCCCCEeECCCCCeeEeCCCCceec------------------------------------cccccc
Confidence 8899999954 5986 899999999999999999986 4553 5
Q ss_pred -ccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCcccccccccccc
Q psy18237 309 -DECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMRRELCYL 357 (1050)
Q Consensus 309 -deC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~~ 357 (1050)
|||...+++|.+ +|+|+.|+|+|.|++||++..+|+.|.++....|..
T Consensus 81 ~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~~~PC~~ 129 (195)
T 1nfu_B 81 RKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGK 129 (195)
T ss_dssp CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCTTC
T ss_pred cccccCCCCCCCC-EeECCCCCeEEECCCCceeCCCCCccccCCCCCCCC
Confidence 677665567886 999999999999999999888899999876555543
No 36
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.16 E-value=1.4e-11 Score=121.29 Aligned_cols=83 Identities=25% Similarity=0.610 Sum_probs=63.5
Q ss_pred cccccccCCCCCCC-CCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccccC
Q psy18237 147 EEIDECNLMPNMCN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCENN 225 (1050)
Q Consensus 147 ~di~eC~~~~~~C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~ 225 (1050)
.|||+|+ +++|+ +|+|++++++|+|.|++||+ |..|+++|+|...
T Consensus 46 ~dideC~--~~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~---------------------------- 91 (146)
T 1x7a_L 46 VDGDQCE--PNPCLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIK---------------------------- 91 (146)
T ss_dssp ----CCS--SCSSCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSG----------------------------
T ss_pred CCcCcCC--CCCCCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCC----------------------------
Confidence 6778887 67887 48999999999999999999 7789988888652
Q ss_pred CCceeecccccccCCCCCCCCCce-ecCCCCeEEEcCCCCccCCCCCCCcCCCccc
Q psy18237 226 IGSFSCRYINECEEMPEICGSGTC-ENNIGSFSCRCEDGYSVKPAEGPACTDENEC 280 (1050)
Q Consensus 226 ~g~~~c~~~~eC~~~~~~C~~~~C-~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC 280 (1050)
+..|.+ +| +++.|+|+|.|++||++. .+++.|+++++.
T Consensus 92 ---------------~~~C~~-~C~~n~~g~y~C~C~~Gy~l~-~dG~~C~~~~~~ 130 (146)
T 1x7a_L 92 ---------------NGRCKQ-FCKTGADSKVLCSCTTGYRLA-PDQKSCKPAVPF 130 (146)
T ss_dssp ---------------GGSCSS-BCCCCSSSCCCCBCCTTEEEC-TTSSSEEECSSS
T ss_pred ---------------CCCCcC-CCCCCCCCCEEeEcCCCcEeC-CCCCcCCCCCCC
Confidence 223444 78 899999999999999976 356677776654
No 37
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.13 E-value=5.3e-11 Score=144.37 Aligned_cols=168 Identities=29% Similarity=0.664 Sum_probs=112.7
Q ss_pred ccCCCCCCC-CCCeEecCCCceE---EecCCCCcCCCCCCcccc--ccCCCCCCCccCccccCCC--CCCCC-CccccCC
Q psy18237 811 ECLSIPNIC-GNGTCTNLNGGFE---CTCSEGYAPGPLGSCAIL--LTLPPISPSTDIDECYERP--GICAN-GDCANFQ 881 (1050)
Q Consensus 811 ~C~~~~~~C-~~g~C~~~~g~~~---C~C~~Gy~g~~~~~C~~~--~~~~~~~~C~~~~eC~~~~--~~C~n-g~C~~~~ 881 (1050)
+|.. .+| +++.|.+..|.|. |.|++||+|. .|+.. .... ...++|...+ ..|.+ |+|++
T Consensus 436 ~C~~--~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~---~Ce~~~~~~~~-----~~~~~C~~~~~~~~Cs~~G~C~~-- 503 (690)
T 3fcs_B 436 ACQA--QAEPNSHRCNNGNGTFECGVCRCGPGWLGS---QCECSEEDYRP-----SQQDECSPREGQPVCSQRGECLC-- 503 (690)
T ss_dssp GGGT--TCCTTCTTTTTTSEEEETTEEEECTTCCSS---SSCCSCC-----------CCCCSSSSSSCGGGGSEEECS--
T ss_pred CCcC--CCCCCCCcccCCCCeEeCCceEeCCCccCC---ceeeccCccCC-----ccCCcCCCCCCCCCCCCCCEEEC--
Confidence 5655 678 6688887778888 9999999998 33311 0000 1225565432 34874 89984
Q ss_pred CceeeecC----CCceeCCCCCCcccCCccCCC-CCCCC-CCEEeeCCCCeEEecCCCceeCCCCCCccccccCCCCCCC
Q psy18237 882 GSFQCTCA----NGYTLNTARDSCVDIDECARH-PNICN-NGTCVNAIGSFKCHCYAGFKLSHNNDCIGNCTDINECESP 955 (1050)
Q Consensus 882 gsy~C~C~----~Gy~g~~~~~~C~~ideC~~~-~~~C~-~g~C~n~~g~y~C~C~~Gy~g~~~~~C~~~C~d~~eC~~~ 955 (1050)
++|.|+ +||+|..++ .++++|... ...|. +|+|++ ++|.|++||+|..+. |. .+
T Consensus 504 --g~C~C~~~~~~Gy~G~~Ce---~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~Ce-C~---~~------- 563 (690)
T 3fcs_B 504 --GQCVCHSSDFGKITGKYCE---CDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCN-CT---TR------- 563 (690)
T ss_dssp --SSEEECCCSSCCCBSTTSC---BCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSC-EE---CC-------
T ss_pred --CeeEeecCCCCCeeCCCcC---cccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCc-cC---CC-------
Confidence 599999 999996654 267788742 22487 789986 699999999998732 11 12
Q ss_pred CCcCCCeeccCCCCCCccCCCCC--CCCCC-CCCeEeecCCceeeeC-CCCCeeCCCCCcccccccCCcccCCCCCCC-C
Q psy18237 956 QACLYGNCTNTLGSNCTDINECE--SPQAC-LYGNCTNTLGSFSCTC-PPNYQLTPAGNACVVLEDINECEEHDNICE-N 1030 (1050)
Q Consensus 956 ~~C~~g~C~~~~g~~C~di~eC~--~~~~C-~~g~C~~~~g~y~C~C-~~Gy~~~~~g~~C~~~~dideC~~~~~~C~-~ 1030 (1050)
+++|. ...+| ++|+|++. +|.| ++||+ |..| +....| +.+|. +
T Consensus 564 ------------------~~~C~~~~g~~C~~~G~C~~g----~C~C~~~Gy~----G~~C---e~C~~C---~~~C~~~ 611 (690)
T 3fcs_B 564 ------------------TDTCMSSNGLLCSGRGKCECG----SCVCIQPGSY----GDTC---EKCPTC---PDACTFK 611 (690)
T ss_dssp ------------------CTTTBCTTSSBTSSSCEEETT----EEECCSTTCB----STTS---CBCTTS---CCTTTSC
T ss_pred ------------------CCcccCCCCCCCCCCCEEeCC----EEECCCCCcc----CCCc---CcCCCC---CCCCCCC
Confidence 23342 12567 67899762 8999 99999 7778 222445 46898 7
Q ss_pred CeEEecCCCeEeecCCCCcC
Q psy18237 1031 GHCTNTFGSFMCSCQDGFKL 1050 (1050)
Q Consensus 1031 g~C~n~~gsy~C~C~~Gy~g 1050 (1050)
++|++ |..||+|
T Consensus 612 g~Cv~--------C~~g~tG 623 (690)
T 3fcs_B 612 KECVE--------CKKFDRG 623 (690)
T ss_dssp CGGGT--------TTTTCCS
T ss_pred CCccc--------CCCCCcc
Confidence 88875 7777775
No 38
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.13 E-value=3.5e-11 Score=113.33 Aligned_cols=73 Identities=29% Similarity=0.683 Sum_probs=54.2
Q ss_pred CC-CCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccccCCCceeecccccc
Q psy18237 159 CN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCENNIGSFSCRYINEC 237 (1050)
Q Consensus 159 C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~g~~~c~~~~eC 237 (1050)
|. +|+|+++.++|+|.|++||+ |..|+++++ ++||
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~~----G~~C~~~~~----------------------------------------~~~C 57 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGWE----GRFCQREVS----------------------------------------FLNC 57 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTEE----STTSCEECC----------------------------------------SSSS
T ss_pred CCCcCCCCCCCCCcEeeCCCCCc----CCCcCcCCc----------------------------------------CCcC
Confidence 66 68999999999999999999 667885432 1223
Q ss_pred cCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCC
Q psy18237 238 EEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDE 277 (1050)
Q Consensus 238 ~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~i 277 (1050)
...+..|.+ +|+|+.|+|+|+|++||+|. .+++.|+++
T Consensus 58 ~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~-~~g~~C~~~ 95 (114)
T 1aut_L 58 SLDNGGCTH-YCLEEVGWRRCSCAPGYKLG-DDLLQCHPA 95 (114)
T ss_dssp SSGGGGCSS-EEEECSSSEEEECCTTEEEC-TTSSCEEEC
T ss_pred cCCCCCCCC-EeECCCCCEEeECCCCeeEC-CCCCccCcC
Confidence 322334545 89999999999999999987 345566554
No 39
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.12 E-value=1.7e-10 Score=143.00 Aligned_cols=187 Identities=26% Similarity=0.675 Sum_probs=128.5
Q ss_pred CccCCCCCCCCCCeEEeCCCCeee----eCCCCceeCCCCCccccCCccCCCCCCCCCCeEecCCCceEEe----cCCCC
Q psy18237 768 NECALMPSACQGGECINTDGSYRC----ECPAGYVKDETGKICIDDNECLSIPNICGNGTCTNLNGGFECT----CSEGY 839 (1050)
Q Consensus 768 deC~~~~~~C~~g~C~~~~gsy~C----~C~~Gy~~~~~g~~C~~~~~C~~~~~~C~~g~C~~~~g~~~C~----C~~Gy 839 (1050)
..|....-.|.++.|++. ++.| .|..|. +...|. ..+|......|.++.|++. +++|. |..|.
T Consensus 174 ~~C~~~~f~C~~g~Ci~~--~~~CDg~~dC~dgs----DE~~C~-~~~C~~~~f~C~~g~Ci~~--~~~Cdg~~dC~dgs 244 (699)
T 1n7d_A 174 SPCSAFEFHCLSGECIHS--SWRCDGGPDCKDKS----DEENCA-VATCRPDEFQCSDGNCIHG--SRQCDREYDCKDMS 244 (699)
T ss_dssp CCSCSSSCCCSSSCCCST--TCTTSSSCCSTTSC----SSCSCC-CCCCCSSEEESSSSCEEET--TCCSSSCCCSSSSC
T ss_pred CCCCCcceecCCCceEec--hhccCCCCCCCCCc----ccccCC-CcccCCCcEecCCCceeee--ecccCCCCCCCCCC
Confidence 345544445777778764 5777 588887 466775 3456655457766888873 56775 66665
Q ss_pred cCCCCCCccccccCCCCCCCccCcccc-CCCCCCCCCccccCCC--ceeeecCCCceeCCCCCCcccCCccCCCCCCCCC
Q psy18237 840 APGPLGSCAILLTLPPISPSTDIDECY-ERPGICANGDCANFQG--SFQCTCANGYTLNTARDSCVDIDECARHPNICNN 916 (1050)
Q Consensus 840 ~g~~~~~C~~~~~~~~~~~C~~~~eC~-~~~~~C~ng~C~~~~g--sy~C~C~~Gy~g~~~~~~C~~ideC~~~~~~C~~ 916 (1050)
-.. .|..+.+|. .....|.+++|++... .+.+.|+.|+.... ..| +++||...++.|.
T Consensus 245 de~---------------~C~~~~~C~~~~~~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~--~~C-~~~eC~~~~~~C~- 305 (699)
T 1n7d_A 245 DEV---------------GCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPI--KEC-GTNECLDNNGGCS- 305 (699)
T ss_dssp SSS---------------STTCCCCCCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSCCC--SSC-CCCCTTSSTTTSC-
T ss_pred ccC---------------CCCCCCcccCCCceecCCCcEeCCcccccccceecCcccccc--ccc-ccccccccccCcC-
Confidence 433 344455663 3334577788876532 24668888865432 234 6889987666675
Q ss_pred CEEeeCCCCeEEecCCCceeCCCCCCccccccCCCCCCCCCcCCCeeccCCCCCCccCCCCCCCCCCCCCeEeecCCcee
Q psy18237 917 GTCVNAIGSFKCHCYAGFKLSHNNDCIGNCTDINECESPQACLYGNCTNTLGSNCTDINECESPQACLYGNCTNTLGSFS 996 (1050)
Q Consensus 917 g~C~n~~g~y~C~C~~Gy~g~~~~~C~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~di~eC~~~~~C~~g~C~~~~g~y~ 996 (1050)
++|+++.++|+|.|++||++.....|+ +|+||+.+.+|.+ +|+|+.|+|+
T Consensus 306 ~~C~~~~~~~~C~C~~G~~~~~~~~C~-----------------------------dideC~~~~~C~~-~C~n~~g~y~ 355 (699)
T 1n7d_A 306 HVCNDLKIGYECLCPDGFQLVAQRRCE-----------------------------DIDECQDPDTCSQ-LCVNLEGGYK 355 (699)
T ss_dssp TTCCCCTTCCCCCCCSSSCCCSSSCCC-----------------------------CCCCCSSSSSCTT-TCCBCSSCBC
T ss_pred CCcccCCCCcEEeCCCCeEcCCCCccc-----------------------------CccccCCCCcccc-ccccCCCCee
Confidence 689999999999999999973211344 4555544556754 8999999999
Q ss_pred eeCCCCCeeCCCCCcc
Q psy18237 997 CTCPPNYQLTPAGNAC 1012 (1050)
Q Consensus 997 C~C~~Gy~~~~~g~~C 1012 (1050)
|.|++||++..++++|
T Consensus 356 C~C~~G~~~~~~~~~C 371 (699)
T 1n7d_A 356 CQCEEGFQLDPHTKAC 371 (699)
T ss_dssp CCCCSSCBCCSSCCCC
T ss_pred eeeecccccCCCCCcc
Confidence 9999999999888899
No 40
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.12 E-value=3.8e-11 Score=149.81 Aligned_cols=153 Identities=31% Similarity=0.708 Sum_probs=81.4
Q ss_pred cccCCCCCCCCCeeecCCCCeEe----eCCCCCeeCCCCCCCccCCccC-CCCCCCCCCcccc---cCCCCccccCCCcc
Q psy18237 151 ECNLMPNMCNHGTCMNTPGSFHC----QCNRGFLYDSDTHQCIDINECE-EMPEICGSGTYIN---ECEEMPEICGSGTC 222 (1050)
Q Consensus 151 eC~~~~~~C~~~~C~~~~g~y~C----~C~~Gy~~~~~g~~C~d~~eC~-~~~~~C~~g~C~~---~C~~g~~~c~~~~C 222 (1050)
+|......|.++.|++ +++.| .|.+|+- +..|..+++|. .....|.+|+|++ .|.. ...|
T Consensus 232 ~C~~~~f~C~~g~Ci~--~~~~Cdg~~dC~dgsD----E~~C~~~~~C~~~~~~~C~~G~Ci~~~~~Cd~------~~dC 299 (791)
T 3m0c_C 232 TCRPDEFQCSDGNCIH--GSRQCDREYDCKDMSD----EVGCVNVTLCEGPNKFKCHSGECITLDKVCNM------ARDC 299 (791)
T ss_dssp -----------------------------------------------CCSTTCCCCTTSCCCCSSCCSCS------SCCS
T ss_pred ccCCCcceecCCceEe--cceecCChhccccccc----cCcccccccccCCCccccCCCcccccccccCC------cccc
Confidence 4544344677777865 45667 5888774 67788888885 3345788888875 2221 1223
Q ss_pred ccCCCce--eecccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCC
Q psy18237 223 ENNIGSF--SCRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNK 300 (1050)
Q Consensus 223 ~~~~g~~--~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~ 300 (1050)
.+..... .| +++||..++..|.+ .|+++.++|+|.|++||++.
T Consensus 300 ~dgsDe~~~~C-~~~~C~~~~~~C~~-~C~~~~~~y~C~C~~Gy~l~--------------------------------- 344 (791)
T 3m0c_C 300 RDWSDEPIKEC-GTNECLDNNGGCSH-VCNDLKIGYECLCPDGFQLV--------------------------------- 344 (791)
T ss_dssp SSSCSCCCTTB-SCCSTTTGGGGCSS-EEEECSBSEEEECCTTCEEE---------------------------------
T ss_pred ccccCcccccc-ccccccccccCccc-cccCCCCCcccCCCCCCccC---------------------------------
Confidence 3221111 12 46777766666754 89999999999999999973
Q ss_pred CCCCcccCccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCccccccc
Q psy18237 301 TGTRCVDIDECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMRR 352 (1050)
Q Consensus 301 ~g~~C~dideC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~ 352 (1050)
+|..|+|||||+. +..|. ++|+|+.|+|+|.|++||++..+++.|.++.+
T Consensus 345 ~g~~C~dideC~~-~~~C~-~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~ 394 (791)
T 3m0c_C 345 AQRRCEDIDECQD-PDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGS 394 (791)
T ss_dssp TTTEEECCCCCSS-SSSCT-TTCCBCSSCBCCCCCSSEECCSSCCCCEETTS
T ss_pred CCCccccCcccCC-CCCCC-CeeecCCCCceeecCCCCEeCCCCceeeeccc
Confidence 2345666666663 45676 48999999999999999999999999987654
No 41
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.10 E-value=5.7e-11 Score=106.87 Aligned_cols=53 Identities=25% Similarity=0.700 Sum_probs=43.7
Q ss_pred eecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcc--cCccCcCCCCCCCC-CeEee
Q psy18237 249 CENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCV--DIDECATSIQRCGE-GFCVN 325 (1050)
Q Consensus 249 C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~--dideC~~~~~~C~~-~~C~n 325 (1050)
|+|..++|+|+|++||+ . |+ +|++|.. .+|++ |+|++
T Consensus 25 C~n~~~~y~C~C~~G~~-~-------------------------------------C~~~~~~~C~~--~pC~ngg~C~~ 64 (91)
T 1tpg_A 25 VLRSNRVEYCWCNSGRA-Q-------------------------------------CHSVPVKSCSE--PRCFNGGTCQQ 64 (91)
T ss_dssp CSSSSCEEEEECSSSCC-B-------------------------------------CCEECEEECSS--CCSCTTCEEEE
T ss_pred cccCCCCcEeECCCCCc-c-------------------------------------cccCcCCcccC--CCCCCCCEeec
Confidence 55667899999999996 2 43 5677765 46998 99999
Q ss_pred cC--CceEEeCCCCCeeC
Q psy18237 326 DV--GTYHCVCPDGYMLL 341 (1050)
Q Consensus 326 ~~--Gsy~C~C~~G~~g~ 341 (1050)
+. ++|+|.|++||+|.
T Consensus 65 ~~~~~~~~C~C~~G~~G~ 82 (91)
T 1tpg_A 65 ALYFSDFVCQCPEGFAGK 82 (91)
T ss_dssp ESSSSCEEEECCTTCBSS
T ss_pred CCCCCCeEeECCCCCcCC
Confidence 98 99999999999983
No 42
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.06 E-value=1.2e-10 Score=114.24 Aligned_cols=88 Identities=24% Similarity=0.653 Sum_probs=68.4
Q ss_pred ecccccccCCCCCCCC-CceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcccCc
Q psy18237 231 CRYINECEEMPEICGS-GTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVDID 309 (1050)
Q Consensus 231 c~~~~eC~~~~~~C~~-~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~did 309 (1050)
+.|||+|+. ++|.| |+|+++.++|+|.|++||+|. .|++ +|+
T Consensus 44 c~did~C~~--~pC~n~g~C~~~~g~y~C~C~~G~~G~-----~C~~------------------------------~~~ 86 (142)
T 2c4f_L 44 YSDGDQCAS--SPCQNGGSCKDQLQSYICFCLPAFEGR-----NCET------------------------------HKD 86 (142)
T ss_dssp HTTCCGGGG--CCCCTTCEEEEETTEEEEECCTTEEST-----TSCE------------------------------EGG
T ss_pred CCccCcCcC--CCcCCCCEEeCCCCCEEeeCCCCccCC-----cccc------------------------------Ccc
Confidence 789999995 45986 899999999999999999986 2332 144
Q ss_pred cCcC---CCCCCCCCeEeecCC-ceEEeCCCCCeeCCCCCccccccccccc
Q psy18237 310 ECAT---SIQRCGEGFCVNDVG-TYHCVCPDGYMLLPSGKECIDMRRELCY 356 (1050)
Q Consensus 310 eC~~---~~~~C~~~~C~n~~G-sy~C~C~~G~~g~~~~~~C~d~~~~~C~ 356 (1050)
+|.. .++.|.+ +|+++.| +|+|.|++||++..+++.|.++++..|.
T Consensus 87 ~c~~c~~~~~~C~~-~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e~pCg 136 (142)
T 2c4f_L 87 DQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCG 136 (142)
T ss_dssp GCCSTTTGGGGCSS-EEECCTTSCCEEECCTTEEECTTSSCEEESSSSCTT
T ss_pred ccccccCCCCCccC-EeECCCCCCEEEECCCCceECCCCCCCCCCCccCCC
Confidence 4321 1233443 9999999 9999999999998899999988775443
No 43
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.05 E-value=3.2e-11 Score=111.94 Aligned_cols=86 Identities=36% Similarity=0.705 Sum_probs=37.0
Q ss_pred CCCCCCcCcccccccCCCCC-C---cccCCCCCCceeecCCCccc-CCCCCCccccCCCCCCCCCCCCeeccCCCCcccC
Q psy18237 67 TAWLPTFTNVTTLTNVTSTN-E---YVTGDNVITRWCVCDEGFRG-DGYSCEDIDECTDNTNYCDYILLCGSKPGEFMNP 141 (1050)
Q Consensus 67 ~~c~~g~~g~~c~~~~~~~n-~---~~c~~~~g~~~C~C~~G~~g-~~~~C~d~~eC~~~~~~C~~~~~C~n~~gs~~~~ 141 (1050)
..-..+|.|..|..++|..+ + .+|.++.++|.|+|++||+| ++..|+|||||.. +
T Consensus 16 ~~~~~~~~~~~Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~-~------------------- 75 (107)
T 2w2n_E 16 PTTENLYFQGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-P------------------- 75 (107)
T ss_dssp ----CCCCSCCBSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEEC---------------------------
T ss_pred cccCCCcCCCCCcCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccccccccCC-C-------------------
Confidence 34568888999988888753 3 37899999999999999998 3468999999973 2
Q ss_pred CCCCccccccccCCCCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCC
Q psy18237 142 MTNKTEEIDECNLMPNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQC 188 (1050)
Q Consensus 142 ~~g~~~di~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C 188 (1050)
++|. ++|+|++|+|+|.|++||+++.++.+|
T Consensus 76 ---------------~~C~-~~C~n~~gsy~C~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 76 ---------------DTCS-QLCVNLEGGYKCQCEEGFQLDPHTKAC 106 (107)
T ss_dssp -----------------------------------------------
T ss_pred ---------------CCcC-CeeecCCCCEEEECCCCceECCCCCcc
Confidence 2343 578888889999999999988777766
No 44
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.05 E-value=1.4e-10 Score=104.33 Aligned_cols=78 Identities=23% Similarity=0.571 Sum_probs=64.7
Q ss_pred ceEEecCCCCcCCCCCCccccccCCCCCCCccCccccCCCCCCCCCccccCCCceeeecCCCceeCCCCCCcc--cCCcc
Q psy18237 830 GFECTCSEGYAPGPLGSCAILLTLPPISPSTDIDECYERPGICANGDCANFQGSFQCTCANGYTLNTARDSCV--DIDEC 907 (1050)
Q Consensus 830 ~~~C~C~~Gy~g~~~~~C~~~~~~~~~~~C~~~~eC~~~~~~C~ng~C~~~~gsy~C~C~~Gy~g~~~~~~C~--~ideC 907 (1050)
+|+|.|++||+|. .| ++++|...+ |++..++|+|.|++||+ .|+ ++++|
T Consensus 1 sy~C~C~~g~~g~---------------~c-~~~~c~~~p-------C~n~~~~y~C~C~~G~~------~C~~~~~~~C 51 (91)
T 1tpg_A 1 SYQVICRDEKTQM---------------IY-QQHQSWLRP-------VLRSNRVEYCWCNSGRA------QCHSVPVKSC 51 (91)
T ss_dssp CCCCCCBCSSSCC---------------BC-CSSCEEEEE-------CSSSSCEEEEECSSSCC------BCCEECEEEC
T ss_pred CeeeECCCCCcCC---------------eE-CCCcccCCc-------cccCCCCcEeECCCCCc------ccccCcCCcc
Confidence 5899999999986 23 467776533 55668899999999996 464 78999
Q ss_pred CCCCCCCC-CCEEeeCC--CCeEEecCCCceeCC
Q psy18237 908 ARHPNICN-NGTCVNAI--GSFKCHCYAGFKLSH 938 (1050)
Q Consensus 908 ~~~~~~C~-~g~C~n~~--g~y~C~C~~Gy~g~~ 938 (1050)
..+| |. +|+|++.. ++|+|.|++||+|..
T Consensus 52 ~~~p--C~ngg~C~~~~~~~~~~C~C~~G~~G~~ 83 (91)
T 1tpg_A 52 SEPR--CFNGGTCQQALYFSDFVCQCPEGFAGKS 83 (91)
T ss_dssp SSCC--SCTTCEEEEESSSSCEEEECCTTCBSSS
T ss_pred cCCC--CCCCCEeecCCCCCCeEeECCCCCcCCc
Confidence 9877 88 78999987 999999999999886
No 45
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.98 E-value=1.1e-09 Score=126.47 Aligned_cols=162 Identities=21% Similarity=0.472 Sum_probs=105.7
Q ss_pred CCccccccCCCCcccccccccccCCcccCccccCCCCCCC-CCeeecCCCceEEecCCCeEeCCCCCccccCccccccCC
Q psy18237 549 SNSLACALTPVLTRKVATPVAVINDCIDLDECRMMSYLCR-NGRCRNNIGSFFCECLQGYTLASEGQYCRDVDECKEVNK 627 (1050)
Q Consensus 549 ~~~~~C~C~~G~~G~~C~~~~~~~~C~dideC~~~~~~C~-ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~~~~eC~~~~~ 627 (1050)
...+.|.|.+||+|..|+ . .| .+|. +|+|++ ++|+|+|++||+ |..|+..
T Consensus 182 ~~~~~c~C~~g~~G~~C~-----~------~C----~~C~~~G~C~~--~~g~C~C~~G~~----G~~Ce~~-------- 232 (423)
T 2gy5_A 182 TRLIVRRCEAQKWGPECN-----H------LC----TACMNNGVCHE--DTGECICPPGFM----GRTCEKA-------- 232 (423)
T ss_dssp EEEEECSSCTTEESTTSC-----E------EC----CCCCTTCEECT--TTCCEECCTTEE----STTSCEE--------
T ss_pred ccccCCcCCCCCCCCCCC-----C------CC----CCCCCCCEEEC--CCCcEeCCCCcc----CCCcccc--------
Confidence 345579999999998776 1 23 2576 479987 467899999999 9888721
Q ss_pred CCCccccCcccchhhhhcccCCcCCCCCccccccCCCCCCCcceeecCCCCccCCCCCC-CCCCCCCCCccccCCCCCCC
Q psy18237 628 RESRCYLDTEEEEEEEEEEEGGYGGGSRRVTCTKEIAGSTTRSTCCCSIGKAWGPQCEE-CPAVGSDEHKTLCPGGSGYR 706 (1050)
Q Consensus 628 ~~~~C~~~~~~c~~~~c~~~g~~~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~-c~~~~~~~~~~~Cp~g~g~~ 706 (1050)
|.++| +|..|.. |.
T Consensus 233 ----------------------------------------------C~~g~-~g~~C~~~C~------------------ 247 (423)
T 2gy5_A 233 ----------------------------------------------CELHT-FGRTCKERCS------------------ 247 (423)
T ss_dssp ----------------------------------------------CCTTE-ESTTSCEECC------------------
T ss_pred ----------------------------------------------cCCCC-CCCCcCccCC------------------
Confidence 22333 4444431 11
Q ss_pred CCCCCCCCCCCCCCEEeecCCCeEEeCCCCcccCCCCCcccccccccCCCCCCCCCCCCCCCccCCCCCCCCC-CeEEeC
Q psy18237 707 PNSATREGICPSPGKCQNVMGSFICTCPPGYRLSPDKNSCQEDFAKLCPEGVGRGDKGEDLNECALMPSACQG-GECINT 785 (1050)
Q Consensus 707 ~~~~~~~~~C~~~g~C~~~~gsy~C~C~~Gy~g~~~~~~C~~~~~c~C~~g~~~~~~~~~ideC~~~~~~C~~-g~C~~~ 785 (1050)
..++|.++++|. .++|+|.|++||+|..+.. .|++||.+..|.. +| .|.+ ++|.+.
T Consensus 248 -----~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~--------~C~~G~~G~~C~~---~C-----~C~ngg~C~~~ 304 (423)
T 2gy5_A 248 -----GQEGCKSYVFCL--PDPYGCSCATGWKGLQCNE--------ACHPGFYGPDCKL---RC-----SCNNGEMCDRF 304 (423)
T ss_dssp -----STTTTTTCCEEE--TTTTEEECCBTCBSGGGCB--------CCCTTBCSBTTCC---BC-----CCTTCCEEETT
T ss_pred -----CCCCCCCCCEEC--CCCCeEEeCCCcccccccC--------ccCCCCcCCcccc---cc-----cCCCCCEecCC
Confidence 135688889996 5678999999999854332 4678888766543 23 3765 589876
Q ss_pred CCCeeeeCCCCceeCCCCCccccCCccCCCCCCCCCCeEecCCCceEEecCCCCcCC
Q psy18237 786 DGSYRCECPAGYVKDETGKICIDDNECLSIPNICGNGTCTNLNGGFECTCSEGYAPG 842 (1050)
Q Consensus 786 ~gsy~C~C~~Gy~~~~~g~~C~~~~~C~~~~~~C~~g~C~~~~g~~~C~C~~Gy~g~ 842 (1050)
. .|.|++||. |..|+....-.. ........ + .|.|.+||.|.
T Consensus 305 ~---~C~C~~G~~----G~~Ce~~~~~~~------~~~~~~~~-~-~~~c~~g~~g~ 346 (423)
T 2gy5_A 305 Q---GCLCSPGWQ----GLQCEREGIPRM------TPKIVDLP-D-HIEVNSGKFNP 346 (423)
T ss_dssp T---EEECCTTCB----STTSCBCSSCCC------CCEECSCC-S-BCCEESEEECC
T ss_pred C---ceECCCCCc----CCCCccCccCCc------CcceecCC-C-eEEeCCCccCC
Confidence 5 399999995 888864311111 11111222 2 47888998885
No 46
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.96 E-value=6.5e-10 Score=138.73 Aligned_cols=185 Identities=26% Similarity=0.672 Sum_probs=85.5
Q ss_pred CCCCeEEeCCCCeee----eCCCCceeCCCCCccccCCccCCCCCCCCCCeEecCCCceEE----ecCCCCcCCCCCCcc
Q psy18237 777 CQGGECINTDGSYRC----ECPAGYVKDETGKICIDDNECLSIPNICGNGTCTNLNGGFEC----TCSEGYAPGPLGSCA 848 (1050)
Q Consensus 777 C~~g~C~~~~gsy~C----~C~~Gy~~~~~g~~C~~~~~C~~~~~~C~~g~C~~~~g~~~C----~C~~Gy~g~~~~~C~ 848 (1050)
|.++.|++. +++| .|..|. +...|.. ..|......|.++.|++. +++| .|..|+.+.
T Consensus 201 C~~g~Ci~~--~~~CDg~~dC~dgs----DE~~C~~-~~C~~~~f~C~~g~Ci~~--~~~Cdg~~dC~dgsDE~------ 265 (791)
T 3m0c_C 201 CLSGECIHS--SWRCDGGPDCKDKS----DEENCAV-ATCRPDEFQCSDGNCIHG--SRQCDREYDCKDMSDEV------ 265 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCceecc--ccccCCCCCCCCCC----CCCCccc-cccCCCcceecCCceEec--ceecCChhccccccccC------
Confidence 444555542 4555 355555 2444531 234433345645666543 3455 366655433
Q ss_pred ccccCCCCCCCccCcccc-CCCCCCCCCccccCCC--ceeeecCCCceeCCCCCCcccCCccCCCCCCCCCCEEeeCCCC
Q psy18237 849 ILLTLPPISPSTDIDECY-ERPGICANGDCANFQG--SFQCTCANGYTLNTARDSCVDIDECARHPNICNNGTCVNAIGS 925 (1050)
Q Consensus 849 ~~~~~~~~~~C~~~~eC~-~~~~~C~ng~C~~~~g--sy~C~C~~Gy~g~~~~~~C~~ideC~~~~~~C~~g~C~n~~g~ 925 (1050)
.|..+++|. .....|.++.|++... .+.+.|+.|+.... ..| ++++|...+..|. +.|+++.++
T Consensus 266 ---------~C~~~~~C~~~~~~~C~~G~Ci~~~~~Cd~~~dC~dgsDe~~--~~C-~~~~C~~~~~~C~-~~C~~~~~~ 332 (791)
T 3m0c_C 266 ---------GCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPI--KEC-GTNECLDNNGGCS-HVCNDLKIG 332 (791)
T ss_dssp ----------------CCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSCCC--TTB-SCCSTTTGGGGCS-SEEEECSBS
T ss_pred ---------cccccccccCCCccccCCCcccccccccCCccccccccCccc--ccc-ccccccccccCcc-ccccCCCCC
Confidence 344555563 2334577788876543 24568888875432 234 4677876555565 699999999
Q ss_pred eEEecCCCceeCCCCCCccccccCCCCCCCCCcCCCeeccCCCCCCccCCCCCCCCCCCCCeEeecCCceeeeCCCCCee
Q psy18237 926 FKCHCYAGFKLSHNNDCIGNCTDINECESPQACLYGNCTNTLGSNCTDINECESPQACLYGNCTNTLGSFSCTCPPNYQL 1005 (1050)
Q Consensus 926 y~C~C~~Gy~g~~~~~C~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~di~eC~~~~~C~~g~C~~~~g~y~C~C~~Gy~~ 1005 (1050)
|+|.|++||.+.....|+ +|+||..+.+|.+ +|+|+.|+|+|.|++||++
T Consensus 333 y~C~C~~Gy~l~~g~~C~-----------------------------dideC~~~~~C~~-~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 333 YECLCPDGFQLVAQRRCE-----------------------------DIDECQDPDTCSQ-LCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp EEEECCTTCEEETTTEEE-----------------------------CCCCCSSSSSCTT-TCCBCSSCBCCCCCSSEEC
T ss_pred cccCCCCCCccCCCCccc-----------------------------cCcccCCCCCCCC-eeecCCCCceeecCCCCEe
Confidence 999999999973211343 5556644456644 8999999999999999999
Q ss_pred CCCCCcccccccCCccc
Q psy18237 1006 TPAGNACVVLEDINECE 1022 (1050)
Q Consensus 1006 ~~~g~~C~~~~dideC~ 1022 (1050)
..++++| .+++++.
T Consensus 383 ~~~~~~C---~~~~~~p 396 (791)
T 3m0c_C 383 DPHTKAC---KAVGSIA 396 (791)
T ss_dssp CSSCCCC---EETTSCC
T ss_pred CCCCcee---eeccccc
Confidence 9889999 6777653
No 47
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.95 E-value=1.3e-10 Score=112.71 Aligned_cols=82 Identities=27% Similarity=0.705 Sum_probs=30.7
Q ss_pred cccccccCCCCCCC-CCeeecCCCCeEeeCCCCCeeCCCCCCCcc-C-CccCCCCCCCCCCcccccCCCCccccCCCccc
Q psy18237 147 EEIDECNLMPNMCN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCID-I-NECEEMPEICGSGTYINECEEMPEICGSGTCE 223 (1050)
Q Consensus 147 ~di~eC~~~~~~C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d-~-~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~ 223 (1050)
.+||+|+ .++|+ +|+|+++.++|+|.|++||+ |..|++ | |+|...
T Consensus 40 ~d~d~C~--~~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~i~d~C~~~-------------------------- 87 (134)
T 2vh0_B 40 KDGDQCE--TSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLD-------------------------- 87 (134)
T ss_dssp -----------------------------------------------CCGGGTG--------------------------
T ss_pred CCcCcCC--CCCCCCcCCcccCCCCEEeeCCCCcc----CCccccCCCCccccC--------------------------
Confidence 6777777 57787 48999999999999999998 678885 5 677542
Q ss_pred cCCCceeecccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCcc
Q psy18237 224 NNIGSFSCRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENE 279 (1050)
Q Consensus 224 ~~~g~~~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ide 279 (1050)
+..|.+ +|+++.|+|+|.|++||++. .+++.|+++++
T Consensus 88 -----------------~~~C~~-~C~~~~g~y~C~C~~Gy~l~-~~g~~C~~~~~ 124 (134)
T 2vh0_B 88 -----------------NGDCDQ-FCHEEQNSVVCSCARGYTLA-DNGKACIPTGP 124 (134)
T ss_dssp -----------------GGGCSS-EEEEETTEEEEECCTTEEEC-TTSSCEEESSS
T ss_pred -----------------CCCCCC-EeECCCCCEEEECCCCcEEC-CCCCccCcCCC
Confidence 233555 89999999999999999976 34566665543
No 48
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.92 E-value=1.9e-10 Score=117.79 Aligned_cols=71 Identities=27% Similarity=0.724 Sum_probs=25.0
Q ss_pred cccccccCCCCCCC-CCeeecCCCCeEeeCCCCCeeCCCCCCCcc-C-CccCCCCCCCCCCcccccCCCCccccCCCccc
Q psy18237 147 EEIDECNLMPNMCN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCID-I-NECEEMPEICGSGTYINECEEMPEICGSGTCE 223 (1050)
Q Consensus 147 ~di~eC~~~~~~C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d-~-~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~ 223 (1050)
.|||+|+ .++|+ +|+|+++.|+|+|.|++||+ |..|++ | ++|...
T Consensus 40 ~dideC~--~~pC~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~-------------------------- 87 (195)
T 1nfu_B 40 KDGDQCE--TSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLD-------------------------- 87 (195)
T ss_dssp -----------------------------------------------CCGGGTG--------------------------
T ss_pred CCCcccC--CCCCCCCCEeECCCCCeeEeCCCCce----eccccccccccccCC--------------------------
Confidence 6777777 67787 48999999999999999998 778985 5 677542
Q ss_pred cCCCceeecccccccCCCCCCCCCceecCCCCeEEEcCCCCccC
Q psy18237 224 NNIGSFSCRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVK 267 (1050)
Q Consensus 224 ~~~g~~~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~ 267 (1050)
+..|.+ .|+++.|+|+|.|++||++.
T Consensus 88 -----------------~~~C~~-~C~n~~gsy~C~C~~Gy~l~ 113 (195)
T 1nfu_B 88 -----------------NGDCDQ-FCHEEQNSVVCSCARGYTLA 113 (195)
T ss_dssp -----------------GGGCSS-EEEEETTEEEEECCTTEEEC
T ss_pred -----------------CCCCCC-EeECCCCCeEEECCCCceeC
Confidence 334555 89999999999999999976
No 49
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.88 E-value=1.4e-09 Score=121.96 Aligned_cols=86 Identities=29% Similarity=0.771 Sum_probs=70.1
Q ss_pred cccccccCCCCCCCC-CceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcc-cCc
Q psy18237 232 RYINECEEMPEICGS-GTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCV-DID 309 (1050)
Q Consensus 232 ~~~~eC~~~~~~C~~-~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~-did 309 (1050)
.|+|+|..+| |.| ++|++..++|+|.|++||+|. .|+ |||
T Consensus 3 ~d~~~C~~~p--C~~~g~C~~~~~~~~C~C~~g~~g~------------------------------------~C~~~~~ 44 (317)
T 3h5c_B 3 KGGSPCISQP--CLHNGSCQDSIWGYTCTCSPGYEGS------------------------------------NCELAKN 44 (317)
T ss_dssp ---CCTTSCC--CTTTCCCCCCSSSCCCCCSSSCCSS------------------------------------SSCCCSS
T ss_pred ccCCcCCCCC--CCCCCEeECCCCCeEEECCCCCcCC------------------------------------ccccCcc
Confidence 4789999655 886 899999999999999999986 465 677
Q ss_pred cCcCC-CCCCCCCeEeecCCceEEeCCCCCeeCCCCCccccccccccc
Q psy18237 310 ECATS-IQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMRRELCY 356 (1050)
Q Consensus 310 eC~~~-~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~ 356 (1050)
||... .++|.+ .|+|+.|+|+|.|++||+|..++..|.++++..|-
T Consensus 45 eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~cg 91 (317)
T 3h5c_B 45 ECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACG 91 (317)
T ss_dssp SCCTTCTTSCSS-EEECCSSSCEEECCTTEECCTTSSCCEECSSCCCC
T ss_pred cCCCCCCCCCcC-ccccCCCeeEEeccccccccccccccccccccccc
Confidence 77652 367987 99999999999999999998888999987765543
No 50
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.87 E-value=2.3e-09 Score=104.96 Aligned_cols=87 Identities=31% Similarity=0.715 Sum_probs=67.2
Q ss_pred CcccCCccCCCCCCCC-CCEEeeCCCCeEEecCCCceeCCCCCCccccccCCCCCCCCCcCCCeeccCCCCCCccCCCCC
Q psy18237 900 SCVDIDECARHPNICN-NGTCVNAIGSFKCHCYAGFKLSHNNDCIGNCTDINECESPQACLYGNCTNTLGSNCTDINECE 978 (1050)
Q Consensus 900 ~C~~ideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~g~~~~~C~~~C~d~~eC~~~~~C~~g~C~~~~g~~C~di~eC~ 978 (1050)
.|.+||+|..++ |. +|+|+++.++|+|.|++||+|.. |+ .++++|.. |.
T Consensus 43 ~c~did~C~~~p--C~n~g~C~~~~g~y~C~C~~G~~G~~---C~---~~~~~c~~----------------------c~ 92 (142)
T 2c4f_L 43 SYSDGDQCASSP--CQNGGSCKDQLQSYICFCLPAFEGRN---CE---THKDDQLI----------------------CV 92 (142)
T ss_dssp HHTTCCGGGGCC--CCTTCEEEEETTEEEEECCTTEESTT---SC---EEGGGCCS----------------------TT
T ss_pred cCCccCcCcCCC--cCCCCEEeCCCCCEEeeCCCCccCCc---cc---cCcccccc----------------------cc
Confidence 467899999877 88 78999999999999999999876 55 11333321 11
Q ss_pred -CCCCCCCCeEeecCC-ceeeeCCCCCeeCCCCCcccccccCCc
Q psy18237 979 -SPQACLYGNCTNTLG-SFSCTCPPNYQLTPAGNACVVLEDINE 1020 (1050)
Q Consensus 979 -~~~~C~~g~C~~~~g-~y~C~C~~Gy~~~~~g~~C~~~~dide 1020 (1050)
.+..|.+ +|+++.+ +|+|.|++||++..+|++| +++++
T Consensus 93 ~~~~~C~~-~C~~~~g~~y~C~C~~Gy~l~~dG~~C---~~~~e 132 (142)
T 2c4f_L 93 NENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSC---TPTVE 132 (142)
T ss_dssp TGGGGCSS-EEECCTTSCCEEECCTTEEECTTSSCE---EESSS
T ss_pred CCCCCccC-EeECCCCCCEEEECCCCceECCCCCCC---CCCCc
Confidence 1233433 8999999 9999999999999999999 67776
No 51
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.81 E-value=9.2e-10 Score=126.87 Aligned_cols=85 Identities=29% Similarity=0.747 Sum_probs=25.2
Q ss_pred cccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcccCccC
Q psy18237 232 RYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVDIDEC 311 (1050)
Q Consensus 232 ~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~dideC 311 (1050)
+|+|||..++..|.+ .|.+..|+|+|.|++||++.. +|..|+|||||
T Consensus 1 ~~~~~C~~~~~~c~~-~C~~~~g~~~C~C~~G~~l~~--------------------------------~~~~C~d~~eC 47 (386)
T 3v65_B 1 TGEENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTE--------------------------------DGRTCQDVNEC 47 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcCcccCCCCCCCC-CCcCCCCCcEeECCCCceECC--------------------------------CCCccCcccee
Confidence 478999988888876 899999999999999999752 34466677777
Q ss_pred cCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCcccccc
Q psy18237 312 ATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMR 351 (1050)
Q Consensus 312 ~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~ 351 (1050)
+. .++|.+ .|+|+.|+|+|.|++||++.++++.|..+.
T Consensus 48 ~~-~~~C~~-~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~ 85 (386)
T 3v65_B 48 AE-EGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALG 85 (386)
T ss_dssp -----CCTT-EEC-----CCEECCTTEEECTTSSCEEECS
T ss_pred CC-cCcccC-cCCCCCCCCeEEECCCceEcCCCCeECCcc
Confidence 63 467876 599999999999999999988899998654
No 52
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.80 E-value=4.3e-09 Score=117.87 Aligned_cols=85 Identities=24% Similarity=0.684 Sum_probs=66.7
Q ss_pred cccccccCCCCCCC-CCeeecCCCCeEeeCCCCCeeCCCCCCCc-cCCccCCCCCCCCCCcccccCCCCccccCCCcccc
Q psy18237 147 EEIDECNLMPNMCN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCI-DINECEEMPEICGSGTYINECEEMPEICGSGTCEN 224 (1050)
Q Consensus 147 ~di~eC~~~~~~C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~-d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~ 224 (1050)
.|+|+|. .++|. +++|+++.++|+|.|++||+ |..|+ |+|||....
T Consensus 3 ~d~~~C~--~~pC~~~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~eC~~~~-------------------------- 50 (317)
T 3h5c_B 3 KGGSPCI--SQPCLHNGSCQDSIWGYTCTCSPGYE----GSNCELAKNECHPER-------------------------- 50 (317)
T ss_dssp ---CCTT--SCCCTTTCCCCCCSSSCCCCCSSSCC----SSSSCCCSSSCCTTC--------------------------
T ss_pred ccCCcCC--CCCCCCCCEeECCCCCeEEECCCCCc----CCccccCcccCCCCC--------------------------
Confidence 4677887 67888 48999999999999999998 77898 888886511
Q ss_pred CCCceeecccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCcccc
Q psy18237 225 NIGSFSCRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECT 281 (1050)
Q Consensus 225 ~~g~~~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~ 281 (1050)
.+.|.+ .|+|+.|+|+|.|++||+|. .+++.|.+++||.
T Consensus 51 ----------------~~~C~~-~C~~~~g~~~C~C~~g~~~~-~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 51 ----------------TDGCQH-FCLPGQESYTCSCAQGYRLG-EDHKQCVPHDQCA 89 (317)
T ss_dssp ----------------TTSCSS-EEECCSSSCEEECCTTEECC-TTSSCCEECSSCC
T ss_pred ----------------CCCCcC-ccccCCCeeEEecccccccc-ccccccccccccc
Confidence 133556 89999999999999999997 4567777777764
No 53
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.77 E-value=3.3e-09 Score=122.82 Aligned_cols=81 Identities=36% Similarity=0.842 Sum_probs=66.8
Q ss_pred ccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCCccccCCCCCCCCCCceecCCCCCCCCCcccCccCcCC
Q psy18237 235 NECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDENECTMRTHNCDDNADCINNPVNKTGTRCVDIDECATS 314 (1050)
Q Consensus 235 ~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~ideC~~~~~~C~~~~~C~n~~g~~~g~~C~dideC~~~ 314 (1050)
|||..++..|. +.|+|++++|+|.|++||++. +|..|+|||||+.
T Consensus 1 ~eC~~~~~~c~-~~C~~~~~~y~C~C~~G~~~~---------------------------------~~~~C~dideC~~- 45 (400)
T 3p5b_L 1 NECLDNNGGCS-HVCNDLKIGYECLCPDGFQLV---------------------------------AQRRCEDIDECQD- 45 (400)
T ss_dssp CCTTTTGGGCS-SEEEECSSSEEEECCTTEEEC---------------------------------SSSCEEECCCCST-
T ss_pred CcccCCCCCCC-CEeECCCCCeEEECCCCCCcC---------------------------------CCCcccCchhhhc-
Confidence 58887776665 589999999999999999974 2345777777764
Q ss_pred CCCCCCCeEeecCCceEEeCCCCCeeCCCCCcccccc
Q psy18237 315 IQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMR 351 (1050)
Q Consensus 315 ~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~ 351 (1050)
+.+|.+ .|+|+.|+|+|.|++||++..+++.|.++.
T Consensus 46 ~~~C~~-~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~ 81 (400)
T 3p5b_L 46 PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVG 81 (400)
T ss_dssp TSSCSS-CCBCCSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred cCCCCC-ccCCCccceeeeccccccccccccceeecc
Confidence 567875 999999999999999999998888887654
No 54
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.72 E-value=8.5e-09 Score=123.43 Aligned_cols=104 Identities=23% Similarity=0.309 Sum_probs=37.6
Q ss_pred EEeCCCCeee-eCCCCceeCCCCCccccCCccCCCCCCC-CCCeEecC----CCceEEecCCCCcCCCCCCccccccCCC
Q psy18237 782 CINTDGSYRC-ECPAGYVKDETGKICIDDNECLSIPNIC-GNGTCTNL----NGGFECTCSEGYAPGPLGSCAILLTLPP 855 (1050)
Q Consensus 782 C~~~~gsy~C-~C~~Gy~~~~~g~~C~~~~~C~~~~~~C-~~g~C~~~----~g~~~C~C~~Gy~g~~~~~C~~~~~~~~ 855 (1050)
|.....++.| +|++||. |..|.....|.. .+| .+++|.+. ...++|.|++||+|..+..|..+++...
T Consensus 411 C~~g~~G~~C~~C~~Gy~----G~~c~~~~~C~~--C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~ 484 (525)
T 4aqs_A 411 CKLHVEGERCDVCKEGFY----DLSAEDPYGCKS--CACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLS 484 (525)
T ss_dssp BCTTEETTTTCEECTTEE----CCCTTSTTSSEE--CCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC---------
T ss_pred CCCCCCCCcccCCCCCCc----CCCCCCCCCCcc--CCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCC
Confidence 4444445567 6999996 555655555554 455 44444332 2345899999999997777776654432
Q ss_pred CCCCccCccccCCCCCCCC-CccccC--CCceeeecCCCceeCCC
Q psy18237 856 ISPSTDIDECYERPGICAN-GDCANF--QGSFQCTCANGYTLNTA 897 (1050)
Q Consensus 856 ~~~C~~~~eC~~~~~~C~n-g~C~~~--~gsy~C~C~~Gy~g~~~ 897 (1050)
.++++|..- .|.+ +.+... ..+++|.|++||+|..+
T Consensus 485 ----~~~~~C~~C--~C~~~gs~~~~C~~~tG~C~C~~G~~G~~C 523 (525)
T 4aqs_A 485 ----NDLDGCRPC--DCDLGGALNNSCSEDSGQCSCLPHMIGRQC 523 (525)
T ss_dssp ---------------------------------------------
T ss_pred ----CCCCCCcCC--CCCCCCccCCccCCCCCeeECCCCCcCCCC
Confidence 345566543 3654 444433 23458999999998654
No 55
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.72 E-value=2.1e-09 Score=123.85 Aligned_cols=83 Identities=31% Similarity=0.839 Sum_probs=19.5
Q ss_pred ccccccCCCCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccccCCC
Q psy18237 148 EIDECNLMPNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCENNIG 227 (1050)
Q Consensus 148 di~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~g 227 (1050)
|||||+..+..|.+ +|++..|+|+|.|++||++..++..|+|+|||.. +.
T Consensus 2 ~~~~C~~~~~~c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~-~~---------------------------- 51 (386)
T 3v65_B 2 GEENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAE-EG---------------------------- 51 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcccCCCCCCCC-CCcCCCCCcEeECCCCceECCCCCccCccceeCC-cC----------------------------
Confidence 67788744445654 8999999999999999998888899999998863 22
Q ss_pred ceeecccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCC
Q psy18237 228 SFSCRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDE 277 (1050)
Q Consensus 228 ~~~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~i 277 (1050)
.|.+ .|+|+.|+|+|.|++||++. .+++.|+.+
T Consensus 52 ---------------~C~~-~C~~~~g~~~C~C~~g~~l~-~d~~~C~~~ 84 (386)
T 3v65_B 52 ---------------YCSQ-GCTNSEGAFQCWCEAGYELR-PDRRSCKAL 84 (386)
T ss_dssp ---------------CCTT-EEC-----CCEECCTTEEEC-TTSSCEEEC
T ss_pred ---------------cccC-cCCCCCCCCeEEECCCceEc-CCCCeECCc
Confidence 2444 49999999999999999986 345555443
No 56
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.71 E-value=1.8e-08 Score=116.44 Aligned_cols=127 Identities=21% Similarity=0.524 Sum_probs=84.0
Q ss_pred ceeEeeCCCCccCCCCCCCCCCCCCCccccchhcccCCCccC--ccccccccCCCcceeee--ccccCCccccccCCccc
Q psy18237 478 RMDCCCTMGMAWGPQCQLCPTRGSQTCEDINECLELSNQCAF--RCHNISMSVSNSLACAL--TPVLTRKISMSVSNSLA 553 (1050)
Q Consensus 478 ~~~C~C~~Gy~g~~~~~~c~~~~~~~C~~~~eC~~~~~~C~~--~C~n~~~~~~~~~~C~C--G~~g~~~~C~~~~~~~~ 553 (1050)
.+.|.|++||.|+ .|+. .| .+|.+ +|.+ ++++|.| ||+|..
T Consensus 184 ~~~c~C~~g~~G~------------~C~~--~C----~~C~~~G~C~~------~~g~C~C~~G~~G~~----------- 228 (423)
T 2gy5_A 184 LIVRRCEAQKWGP------------ECNH--LC----TACMNNGVCHE------DTGECICPPGFMGRT----------- 228 (423)
T ss_dssp EEECSSCTTEEST------------TSCE--EC----CCCCTTCEECT------TTCCEECCTTEESTT-----------
T ss_pred ccCCcCCCCCCCC------------CCCC--CC----CCCCCCCEEEC------CCCcEeCCCCccCCC-----------
Confidence 4579999999984 3432 12 14444 4543 3456666 666655
Q ss_pred cc--cCCCCcccccccccccCCcccCccccCCCCCCCC-CeeecCCCceEEecCCCeEeCCCCCccccCccccccCCCCC
Q psy18237 554 CA--LTPVLTRKVATPVAVINDCIDLDECRMMSYLCRN-GRCRNNIGSFFCECLQGYTLASEGQYCRDVDECKEVNKRES 630 (1050)
Q Consensus 554 C~--C~~G~~G~~C~~~~~~~~C~dideC~~~~~~C~n-g~C~n~~gsy~C~C~~Gy~~~~~G~~C~~~~eC~~~~~~~~ 630 (1050)
|. |.++|.|..| . ++|.. ...|.+ +.|. .++|+|.|++||+ |..|+.
T Consensus 229 Ce~~C~~g~~g~~C---------~--~~C~~-~~~C~~~g~C~--~~~~~C~C~~G~~----G~~C~~------------ 278 (423)
T 2gy5_A 229 CEKACELHTFGRTC---------K--ERCSG-QEGCKSYVFCL--PDPYGCSCATGWK----GLQCNE------------ 278 (423)
T ss_dssp SCEECCTTEESTTS---------C--EECCS-TTTTTTCCEEE--TTTTEEECCBTCB----SGGGCB------------
T ss_pred cccccCCCCCCCCc---------C--ccCCC-CCCCCCCCEEC--CCCCeEEeCCCcc----cccccC------------
Confidence 43 5566655433 2 25543 466875 6885 5678999999999 888862
Q ss_pred ccccCcccchhhhhcccCCcCCCCCccccccCCCCCCCcceeecCCCCccCCCCCCCCCCCCCCCccccCCCCCCCCCCC
Q psy18237 631 RCYLDTEEEEEEEEEEEGGYGGGSRRVTCTKEIAGSTTRSTCCCSIGKAWGPQCEECPAVGSDEHKTLCPGGSGYRPNSA 710 (1050)
Q Consensus 631 ~C~~~~~~c~~~~c~~~g~~~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~c~~~~~~~~~~~Cp~g~g~~~~~~ 710 (1050)
.|.+|| +|..|+.
T Consensus 279 ------------------------------------------~C~~G~-~G~~C~~------------------------ 291 (423)
T 2gy5_A 279 ------------------------------------------ACHPGF-YGPDCKL------------------------ 291 (423)
T ss_dssp ------------------------------------------CCCTTB-CSBTTCC------------------------
T ss_pred ------------------------------------------ccCCCC-cCCcccc------------------------
Confidence 256777 6777763
Q ss_pred CCCCCCCCCCEEeecCCCeEEeCCCCcccCC
Q psy18237 711 TREGICPSPGKCQNVMGSFICTCPPGYRLSP 741 (1050)
Q Consensus 711 ~~~~~C~~~g~C~~~~gsy~C~C~~Gy~g~~ 741 (1050)
..+|.++++|++.. .|.|++||+|..
T Consensus 292 --~C~C~ngg~C~~~~---~C~C~~G~~G~~ 317 (423)
T 2gy5_A 292 --RCSCNNGEMCDRFQ---GCLCSPGWQGLQ 317 (423)
T ss_dssp --BCCCTTCCEEETTT---EEECCTTCBSTT
T ss_pred --cccCCCCCEecCCC---ceECCCCCcCCC
Confidence 23588899998764 399999999853
No 57
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.67 E-value=1.3e-08 Score=117.75 Aligned_cols=79 Identities=30% Similarity=0.794 Sum_probs=60.8
Q ss_pred ccccCCCCCCC-CCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCccccCCCc
Q psy18237 150 DECNLMPNMCN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCENNIGS 228 (1050)
Q Consensus 150 ~eC~~~~~~C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~g~ 228 (1050)
|||+. ++|. .++|+|++|+|+|.|++||++ .++..|+|||||.. +
T Consensus 1 ~eC~~--~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~-~------------------------------ 46 (400)
T 3p5b_L 1 NECLD--NNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD-P------------------------------ 46 (400)
T ss_dssp CCTTT--TGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCST-T------------------------------
T ss_pred CcccC--CCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhc-c------------------------------
Confidence 46763 3343 369999999999999999998 45788998888864 2
Q ss_pred eeecccccccCCCCCCCCCceecCCCCeEEEcCCCCccCCCCCCCcCCC
Q psy18237 229 FSCRYINECEEMPEICGSGTCENNIGSFSCRCEDGYSVKPAEGPACTDE 277 (1050)
Q Consensus 229 ~~c~~~~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~C~~i 277 (1050)
..|.+ .|+|+.|+|+|.|.+||+++ .+++.|.++
T Consensus 47 -------------~~C~~-~C~n~~g~~~C~C~~g~~~~-~~~~~C~~~ 80 (400)
T 3p5b_L 47 -------------DTCSQ-LCVNLEGGYKCQCEEGFQLD-PHTKACKAV 80 (400)
T ss_dssp -------------SSCSS-CCBCCSSSCBCCCCTTCCCC-TTTSSCCCS
T ss_pred -------------CCCCC-ccCCCccceeeecccccccc-ccccceeec
Confidence 23444 79999999999999999997 455566554
No 58
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.65 E-value=1.8e-08 Score=121.86 Aligned_cols=101 Identities=28% Similarity=0.652 Sum_probs=70.2
Q ss_pred ccccC------CCCcccccccccccCCcccCccccCC-CCCCC---CCeeecCCCceEEecCCCeEeCCCCCccc---cC
Q psy18237 553 ACALT------PVLTRKVATPVAVINDCIDLDECRMM-SYLCR---NGRCRNNIGSFFCECLQGYTLASEGQYCR---DV 619 (1050)
Q Consensus 553 ~C~C~------~G~~G~~C~~~~~~~~C~dideC~~~-~~~C~---ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~---~~ 619 (1050)
+|.|+ +||+|..|+ .++++|... ..+|. +|+|++ | +|.|++||+ |..|+ ++
T Consensus 494 ~C~C~~~~~~~~G~~G~~Ce--------~~~~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~~----G~~Cec~~~~ 557 (687)
T 3k6s_B 494 QCLCHTSDVPGKLIYGQYCE--------CDTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGFE----GSACQCERTT 557 (687)
T ss_dssp EEEECCCCSTTCCEESTTSC--------EESSCSCEETTEETSHHHHEEEET--T--EEEECTTCC----STTSCSCCSS
T ss_pred EEEcCCCCCCCCCccccccc--------cccccccCCCCcCcCCCCCCeEEC--C--EEEcCCCCc----CCCCccCCCC
Confidence 68999 999998887 456677641 24686 479985 2 799999999 99997 23
Q ss_pred ccccccCCCCCccccCcccchhhhhcccCCcCCCCCccccccCCCCCCCcceeecCCCCccCCCCCCCCCCCCCCCcccc
Q psy18237 620 DECKEVNKRESRCYLDTEEEEEEEEEEEGGYGGGSRRVTCTKEIAGSTTRSTCCCSIGKAWGPQCEECPAVGSDEHKTLC 699 (1050)
Q Consensus 620 ~eC~~~~~~~~~C~~~~~~c~~~~c~~~g~~~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~c~~~~~~~~~~~C 699 (1050)
+.|.... + .+| .++++|.. +.|.|.+|| .|..|+.|+. |
T Consensus 558 ~~C~~~~--g------------~~C---------s~~G~C~~--------g~C~C~~Gy-~G~~Ce~c~~---------C 596 (687)
T 3k6s_B 558 EGCLNPR--R------------VEC---------SGRGRCRC--------NVCECHSGY-QLPLCQECPG---------C 596 (687)
T ss_dssp CTTBCTT--C------------SBT---------SSSCCBCS--------SCBCCSTTC-CTTTTCCCTT---------S
T ss_pred CCCCCCC--C------------CCC---------CCCCcCCC--------CEEECCCCC-cCCCCCCCCC---------C
Confidence 4444320 0 012 34566653 479999999 8999997641 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEe
Q psy18237 700 PGGSGYRPNSATREGICPSPGKCQ 723 (1050)
Q Consensus 700 p~g~g~~~~~~~~~~~C~~~g~C~ 723 (1050)
+++|.+++.|+
T Consensus 597 -------------~~~C~~~g~Cv 607 (687)
T 3k6s_B 597 -------------PSPCGKYISCA 607 (687)
T ss_dssp -------------CCCCTTTHHHH
T ss_pred -------------CcccCCCCCCC
Confidence 35788888887
No 59
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.58 E-value=4.6e-08 Score=118.37 Aligned_cols=172 Identities=25% Similarity=0.614 Sum_probs=107.8
Q ss_pred CCCCCCCCEEeecCCCeEEeCCCCcccCCCCCcccccccccCCCCCCCCCCCCCCCccCCCC--CCCC-CCeEEeCCCCe
Q psy18237 713 EGICPSPGKCQNVMGSFICTCPPGYRLSPDKNSCQEDFAKLCPEGVGRGDKGEDLNECALMP--SACQ-GGECINTDGSY 789 (1050)
Q Consensus 713 ~~~C~~~g~C~~~~gsy~C~C~~Gy~g~~~~~~C~~~~~c~C~~g~~~~~~~~~ideC~~~~--~~C~-~g~C~~~~gsy 789 (1050)
+.+|.++|+|+. ..|.|++||+|..+. |+.++.... .....|...+ ..|. +|+|+..
T Consensus 434 s~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce----------c~~~~~~~~--~~~~~C~~~~~~~~Cs~~G~C~~G---- 493 (687)
T 3k6s_B 434 RSLCHGKGFLEC----GICRCDTGYIGKNCE----------CQTQGRSSQ--ELEGSCRKDNNSIICSGLGDCVCG---- 493 (687)
T ss_dssp SSTGGGSEEESS----SSEEECSSEESTTSC----------EESSSCCCS--GGGSTTSSSTTSCGGGSSEEEETT----
T ss_pred CCCCCCCCEEeC----CEeEcCCCCcCCccc----------ccCCcCCcc--ccCCCCCCCCCCCcCCCCCEEeCC----
Confidence 568988999983 469999999996432 222211100 0112354321 2376 4789842
Q ss_pred eeeCC------CCceeCCCCCccc-cCCccCCC-CCCC-C--CCeEecCCCceEEecCCCCcCCCCCCccccccCCCCCC
Q psy18237 790 RCECP------AGYVKDETGKICI-DDNECLSI-PNIC-G--NGTCTNLNGGFECTCSEGYAPGPLGSCAILLTLPPISP 858 (1050)
Q Consensus 790 ~C~C~------~Gy~~~~~g~~C~-~~~~C~~~-~~~C-~--~g~C~~~~g~~~C~C~~Gy~g~~~~~C~~~~~~~~~~~ 858 (1050)
.|.|+ +||. |..|+ ++..|... ..+| + +|+|... +|.|++||+|..+. |.
T Consensus 494 ~C~C~~~~~~~~G~~----G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g----~C~C~~G~~G~~Ce-c~---------- 554 (687)
T 3k6s_B 494 QCLCHTSDVPGKLIY----GQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQ-CE---------- 554 (687)
T ss_dssp EEEECCCCSTTCCEE----STTSCEESSCSCEETTEETSHHHHEEEETT----EEEECTTCCSTTSC-SC----------
T ss_pred EEEcCCCCCCCCCcc----ccccccccccccCCCCcCcCCCCCCeEECC----EEEcCCCCcCCCCc-cC----------
Confidence 79999 9995 88885 56677632 2468 6 7999852 89999999998331 10
Q ss_pred CccCccccCC-CCCCCC-CccccCCCceeeecCCCceeCCCCCCcccCCccCCCCCCCC-CCEEeeCCCCeEEecCCCce
Q psy18237 859 STDIDECYER-PGICAN-GDCANFQGSFQCTCANGYTLNTARDSCVDIDECARHPNICN-NGTCVNAIGSFKCHCYAGFK 935 (1050)
Q Consensus 859 C~~~~eC~~~-~~~C~n-g~C~~~~gsy~C~C~~Gy~g~~~~~~C~~ideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~ 935 (1050)
.+++.|... ...|.+ |+|.. ++|.|++||+|..++. | ..|. ..|. ++.|+ .|...++
T Consensus 555 -~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce~-c---~~C~---~~C~~~g~Cv--------~C~~~~~ 614 (687)
T 3k6s_B 555 -RTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQLPLCQE-C---PGCP---SPCGKYISCA--------ECLKFEK 614 (687)
T ss_dssp -CSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCCTTTTCC-C---TTSC---CCCTTTHHHH--------TTTTSCS
T ss_pred -CCCCCCCCCCCCCCCCCCcCCC----CEEECCCCCcCCCCCC-C---CCCC---cccCCCCCCC--------cccCCCC
Confidence 134566542 235875 88987 4899999999976642 2 3453 2377 66776 3555555
Q ss_pred eCCCCCCc
Q psy18237 936 LSHNNDCI 943 (1050)
Q Consensus 936 g~~~~~C~ 943 (1050)
|.....|.
T Consensus 615 G~~~~~C~ 622 (687)
T 3k6s_B 615 GPFGKNCS 622 (687)
T ss_dssp CCCSSCSS
T ss_pred CCCCcccc
Confidence 55433455
No 60
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.55 E-value=1.1e-07 Score=113.82 Aligned_cols=61 Identities=21% Similarity=0.347 Sum_probs=16.5
Q ss_pred CCCcceeecCCCCccCCCCCCCCCCCCCCCccccCCCCCCCCC----CCCCCCCCCCCCEEeec--CCCeEEeCCCCccc
Q psy18237 666 STTRSTCCCSIGKAWGPQCEECPAVGSDEHKTLCPGGSGYRPN----SATREGICPSPGKCQNV--MGSFICTCPPGYRL 739 (1050)
Q Consensus 666 ~~~~~~C~C~~G~~~G~~C~~c~~~~~~~~~~~Cp~g~g~~~~----~~~~~~~C~~~g~C~~~--~gsy~C~C~~Gy~g 739 (1050)
+...++|.|.+|| .|.+|+.|+ .||++. ..+.+.+|.+++.+... ..+++|+|++||+|
T Consensus 456 d~~tg~C~C~~g~-~G~~Ce~C~--------------~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G 520 (525)
T 4aqs_A 456 DSETGYCYCKRLV-TGQRCDQCL--------------PQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIG 520 (525)
T ss_dssp CTTTCCBCBCTTC-CSTTTCC-----------------------------------------------------------
T ss_pred cCCCCEEECCCCC-cCCCcccCC--------------CCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcC
Confidence 3455689999999 899998765 233321 22446678877776543 23457999999998
Q ss_pred CC
Q psy18237 740 SP 741 (1050)
Q Consensus 740 ~~ 741 (1050)
..
T Consensus 521 ~~ 522 (525)
T 4aqs_A 521 RQ 522 (525)
T ss_dssp --
T ss_pred CC
Confidence 53
No 61
>1apj_A Fibrillin; microfibril, TB module, marfan syndrome, connective tissue, novel fold, extracellular matrix; NMR {Homo sapiens} SCOP: g.23.1.1
Probab=98.54 E-value=3.7e-09 Score=89.90 Aligned_cols=69 Identities=29% Similarity=0.822 Sum_probs=64.0
Q ss_pred ccccccccccccccCCCCcCCCcCCCCcceeeecC-CCCcCCCCCCCCCCCCCcceeeeccCCCCcccCC
Q psy18237 346 ECIDMRRELCYLNYTDGLCSLPMSNEQTRMVCCCS-MGQSWGKPCQPCPPPGSRDYILLCGKDFAKLCPE 414 (1050)
Q Consensus 346 ~C~d~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~-~g~~~~~~C~~Cp~~~~~~~~~~C~~~~g~~~~~ 414 (1050)
.|+|++..+||..+.++.|+.+...++++.+|+|+ +|.+||.+||.||..++++|+.||+.++||+...
T Consensus 1 ~c~D~R~~~Cy~~~~~g~C~~p~~~~~tk~~CCCs~~G~aWG~~Ce~CP~~gs~ef~~lCP~G~G~~~~~ 70 (74)
T 1apj_A 1 SAQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPYGSGIIVGP 70 (74)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEHHHHHTTSCCSEETTTTEECCCTTSHHHHHHCSSCSCSSCCT
T ss_pred CceeccccCccccccCCcccCCCCCCccccccccCCCCCccCCCcccCCCCChHHHHhhCcCCCcccCCC
Confidence 47889999999999989999999999999999999 6999999999999999999999999999998654
No 62
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.21 E-value=3.8e-07 Score=73.35 Aligned_cols=46 Identities=24% Similarity=0.592 Sum_probs=39.2
Q ss_pred ccccCCCCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCC
Q psy18237 150 DECNLMPNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEE 196 (1050)
Q Consensus 150 ~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~ 196 (1050)
|||+.....|++ .|+|++|+|+|.|++||++..++.+|++||||.-
T Consensus 2 dEC~~~~~~C~~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~c 47 (55)
T 2jkh_L 2 KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 47 (55)
T ss_dssp CCTTTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCT
T ss_pred ccccCCCCCcCc-EeEcCCCCeEEeCCCCCEECCCCCeeccCccccC
Confidence 667654556764 8999999999999999999999999999999853
No 63
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.15 E-value=9.8e-07 Score=70.92 Aligned_cols=46 Identities=28% Similarity=0.603 Sum_probs=40.2
Q ss_pred ccccCCCCCCCCCeeecCCCceEEecCCCeEeCCCCCccccCccccc
Q psy18237 578 DECRMMSYLCRNGRCRNNIGSFFCECLQGYTLASEGQYCRDVDECKE 624 (1050)
Q Consensus 578 deC~~~~~~C~ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~~~~eC~~ 624 (1050)
|||......|.+ .|+|++|+|+|.|++||+|..++++|++++||.-
T Consensus 2 dEC~~~~~~C~~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~c 47 (55)
T 2jkh_L 2 KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 47 (55)
T ss_dssp CCTTTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCT
T ss_pred ccccCCCCCcCc-EeEcCCCCeEEeCCCCCEECCCCCeeccCccccC
Confidence 677765667874 9999999999999999999999999999998753
No 64
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.08 E-value=2.1e-06 Score=72.25 Aligned_cols=50 Identities=28% Similarity=0.640 Sum_probs=43.1
Q ss_pred ccCccCcCCCCCCCCCeEeecCC-ceEEeCCCCCeeCCCCCccccccccccc
Q psy18237 306 VDIDECATSIQRCGEGFCVNDVG-TYHCVCPDGYMLLPSGKECIDMRRELCY 356 (1050)
Q Consensus 306 ~dideC~~~~~~C~~~~C~n~~G-sy~C~C~~G~~g~~~~~~C~d~~~~~C~ 356 (1050)
+|||||+..++.|.+ .|+|++| +|+|.|++||.+..++++|.++++..|.
T Consensus 3 ~d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~Cg 53 (69)
T 1kli_L 3 DDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCG 53 (69)
T ss_dssp SCCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTT
T ss_pred cccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeECCCCCcccCcccccCC
Confidence 578888876778875 8999999 8999999999999999999999885543
No 65
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.07 E-value=3.2e-06 Score=67.36 Aligned_cols=43 Identities=42% Similarity=0.901 Sum_probs=35.1
Q ss_pred ccCccCcCC--------CCCCCCCeEeecCCceEEeCCCCCeeCCCCCcccc
Q psy18237 306 VDIDECATS--------IQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECID 349 (1050)
Q Consensus 306 ~dideC~~~--------~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d 349 (1050)
+|||||+.. .++|. ++|+|++|+|+|.|++||++..+++.|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~-~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ-HLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS-SEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCC-CEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 367777653 35787 59999999999999999999888888753
No 66
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.07 E-value=1.2e-06 Score=73.60 Aligned_cols=51 Identities=31% Similarity=0.578 Sum_probs=43.2
Q ss_pred ecccccccCCCCCCCCCceecCCC-CeEEEcCCCCccCCCCCCCcCCCccccCC
Q psy18237 231 CRYINECEEMPEICGSGTCENNIG-SFSCRCEDGYSVKPAEGPACTDENECTMR 283 (1050)
Q Consensus 231 c~~~~eC~~~~~~C~~~~C~~~~g-~y~C~C~~Gy~g~~~~~~~C~~ideC~~~ 283 (1050)
.+|||||+.+.+.|++ .|+|+.| +|+|.|++||++. .|+++|++||||.-+
T Consensus 2 ~~d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~-~D~~tC~d~dec~Cg 53 (69)
T 1kli_L 2 KDDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLL-ADGVSCTPTVEYPCG 53 (69)
T ss_dssp CSCCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEEC-TTSSCEEECSSSCTT
T ss_pred CcccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeEC-CCCCcccCcccccCC
Confidence 3689999988888976 7999999 8999999999987 578888888887543
No 67
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.97 E-value=3.9e-06 Score=66.90 Aligned_cols=42 Identities=31% Similarity=0.808 Sum_probs=34.2
Q ss_pred cccccccCC--------CCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 147 EEIDECNLM--------PNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 147 ~di~eC~~~--------~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
+|||||... .++|+ ++|+|++|+|+|.|++||++..++..|+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~-~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ-HLCHNYVGGYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS-SEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred CccccccCcccccccccCCCCC-CEeECCCCCeEEECCCCCeECCCCCccC
Confidence 367777642 26786 4999999999999999999988888886
No 68
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.97 E-value=4.4e-06 Score=66.65 Aligned_cols=37 Identities=30% Similarity=0.800 Sum_probs=32.1
Q ss_pred ccCccccCCCCCCCC-Cee-----ecCCCceEEecCCCeEeCCCCCccc
Q psy18237 575 IDLDECRMMSYLCRN-GRC-----RNNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 575 ~dideC~~~~~~C~n-g~C-----~n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
++||||+. ++|+| |+| ++..++|+|.|++||+ |++|+
T Consensus 6 ~~~~eC~s--~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 6 VKCAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp EECCSTTT--TTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred ccCCCCcC--CCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 78999998 89997 699 5677899999999999 99998
No 69
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.89 E-value=9.3e-06 Score=68.77 Aligned_cols=40 Identities=28% Similarity=0.546 Sum_probs=30.2
Q ss_pred ccCccCcCCCCCCCC-CeEeecCCceEEe-CCCCCeeCCCCC
Q psy18237 306 VDIDECATSIQRCGE-GFCVNDVGTYHCV-CPDGYMLLPSGK 345 (1050)
Q Consensus 306 ~dideC~~~~~~C~~-~~C~n~~Gsy~C~-C~~G~~g~~~~~ 345 (1050)
+|||||+..+++|.+ ++|+|++|+|+|. +..||++..++.
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~ 42 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE 42 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC
Confidence 378899876778988 8999999999998 345565544443
No 70
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.82 E-value=1.1e-05 Score=59.71 Aligned_cols=36 Identities=33% Similarity=0.837 Sum_probs=30.6
Q ss_pred ccccccCCCCCCCC-CeeecCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 148 EIDECNLMPNMCNH-GTCMNTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 148 di~eC~~~~~~C~~-~~C~~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
|||+|+ .++|+| |+|+++.++|+|.|++||+ |..|+
T Consensus 2 d~d~C~--~~pC~ngg~C~~~~~~~~C~C~~G~~----G~~Ce 38 (39)
T 1edm_B 2 DGDQCE--SNPCLNGGSCKDDINSYECWCPFGFE----GKNCE 38 (39)
T ss_dssp CCCTTT--TCCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred ccccCC--CCCCCCCCEeEcCCCceEeECCCCCc----CCccC
Confidence 678887 678884 8999999999999999998 66665
No 71
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.81 E-value=9.5e-06 Score=60.10 Aligned_cols=37 Identities=38% Similarity=0.959 Sum_probs=32.8
Q ss_pred ccCccccCCCCCCCC-CeeecCCCceEEecCCCeEeCCCCCccc
Q psy18237 575 IDLDECRMMSYLCRN-GRCRNNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 575 ~dideC~~~~~~C~n-g~C~n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
+|+|+|.. ++|.| |+|++..++|+|.|++||+ |.+|+
T Consensus 1 ~d~d~C~~--~pC~ngg~C~~~~~~~~C~C~~G~~----G~~Ce 38 (39)
T 1edm_B 1 VDGDQCES--NPCLNGGSCKDDINSYECWCPFGFE----GKNCE 38 (39)
T ss_dssp CCCCTTTT--CCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred CccccCCC--CCCCCCCEeEcCCCceEeECCCCCc----CCccC
Confidence 36899986 78996 6999999999999999999 88885
No 72
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.79 E-value=6.3e-06 Score=64.99 Aligned_cols=38 Identities=18% Similarity=0.696 Sum_probs=33.6
Q ss_pred CCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCCccCCcc
Q psy18237 156 PNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINEC 194 (1050)
Q Consensus 156 ~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC 194 (1050)
...|++ .|+|++|+|+|.|++||++..++.+|+||||+
T Consensus 5 ng~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 5 NGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp TTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CCCcCC-EeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 345654 79999999999999999999999999999997
No 73
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.77 E-value=1.6e-05 Score=63.42 Aligned_cols=37 Identities=24% Similarity=0.757 Sum_probs=27.6
Q ss_pred cccccccCCCCCCCC-Cee-----ecCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 147 EEIDECNLMPNMCNH-GTC-----MNTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 147 ~di~eC~~~~~~C~~-~~C-----~~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
.+||||+ .+||+| |+| ++..++|+|.|++||+ |.+|+
T Consensus 6 ~~~~eC~--s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 6 VKCAEKE--KTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp EECCSTT--TTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred ccCCCCc--CCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 4566666 567764 677 4667899999999999 78898
No 74
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.76 E-value=1.5e-05 Score=67.58 Aligned_cols=69 Identities=19% Similarity=0.380 Sum_probs=44.4
Q ss_pred cccccccCCCCCCC-CCeeecCCCCeEee-CCCCCeeCCCCCCCccCCccCCCCCCCCCCcccccCCCCccccCCCcccc
Q psy18237 147 EEIDECNLMPNMCN-HGTCMNTPGSFHCQ-CNRGFLYDSDTHQCIDINECEEMPEICGSGTYINECEEMPEICGSGTCEN 224 (1050)
Q Consensus 147 ~di~eC~~~~~~C~-~~~C~~~~g~y~C~-C~~Gy~~~~~g~~C~d~~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~ 224 (1050)
+|||||....++|. +++|+|++|+|+|. +..||.++.++..+. . .+..+...+.|++||++=.+++|++
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~~--~-------~~~~~~~~~~C~~Gy~~~~~~~C~D 71 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPP--P-------PVPPAQHPNPCPPGYEPDDQDSCVD 71 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSCC--C-------SSCSCSSCCCSCTTEEEECCCCSCC
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCccc--c-------ccccCccccCCCCCeeeCCCCcccC
Confidence 36778876667787 57899999999997 567888776665432 1 1222333446888887533336653
No 75
>1ksq_A Latent transforming growth factor beta binding protein 1; structure, LTBP-1, TGF-beta, TB domain, latency associated propeptide, LAP; NMR {Homo sapiens} SCOP: g.23.1.1
Probab=97.76 E-value=2.3e-06 Score=72.62 Aligned_cols=64 Identities=30% Similarity=0.793 Sum_probs=57.4
Q ss_pred ccccccccccCC-CCcCCCcCCCCcceeeecCCCCcCCCCCCC--CCCCCCcceeeeccCCCCcccC
Q psy18237 350 MRRELCYLNYTD-GLCSLPMSNEQTRMVCCCSMGQSWGKPCQP--CPPPGSRDYILLCGKDFAKLCP 413 (1050)
Q Consensus 350 ~~~~~C~~~~~~-~~C~~~~~~~~~~~~C~C~~g~~~~~~C~~--Cp~~~~~~~~~~C~~~~g~~~~ 413 (1050)
..+.+||..+.+ +.|+++...++++.+|+|+.|.+||..|+. ||..++++|+.||+.++||+.+
T Consensus 7 ~~~~~Cy~~~~~~~~Cs~pl~~~~tk~~CCC~~G~~WG~~ce~~~CP~~gt~~f~~lCP~G~G~~~~ 73 (75)
T 1ksq_A 7 EEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMCPKGKGFVPA 73 (75)
T ss_dssp SCEEEEESSBCTTTTCBCSSCCEEEHHHHHHTCCSEEEETTEEEECCCSSSHHHHHHCSSCSCCSSS
T ss_pred ccccCceeccccCCcCCCcccCccccccccccccCccCCCCCccCCCCCCHHHHHhcCCCCcccCcC
Confidence 345679988887 699999999999999999999999999996 9999999999999999998743
No 76
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.76 E-value=3e-05 Score=77.28 Aligned_cols=123 Identities=20% Similarity=0.377 Sum_probs=64.5
Q ss_pred CccccCCCceeeCCCCCcccccccceeE-eeCCCCccCCCCCCCCCCCCCCccccchhcc--cCCCccC-ccccc-----
Q psy18237 454 FCYRSLTNGRCVLPTGPALLMEVTRMDC-CCTMGMAWGPQCQLCPTRGSQTCEDINECLE--LSNQCAF-RCHNI----- 524 (1050)
Q Consensus 454 ~C~~~~~~g~C~~~~g~~~~~~~~~~~C-~C~~Gy~g~~~~~~c~~~~~~~C~~~~eC~~--~~~~C~~-~C~n~----- 524 (1050)
+|. ++++|+..++ ...++| .|++||+|.... .|+.+.+. +++.. ....|.. .|.+.
T Consensus 2 ~C~---~~g~C~~~~~------~g~~~C~~C~~g~~G~~Ce-~C~~g~~g-----~~~~~~~~~~~C~~C~C~~~~~~~~ 66 (162)
T 1klo_A 2 PCP---GGSSCAIVPK------TKEVVCTHCPTGTAGKRCE-LCDDGYFG-----DPLGSNGPVRLCRPCQCNDNIDPNA 66 (162)
T ss_dssp CSC---TTCCEEECSS------SCCEEECSCCTTEESTTSC-EECTTEEE-----ETTCTTSSCEEEEECCSTTCBCTTC
T ss_pred cCc---CcCcccccCC------CCCEEeCCCCCCCcCCCCc-CCCCCCcC-----CcccccCCCCCCeeCcCCCCCCccc
Confidence 577 8899987652 116799 799999995542 22221100 01100 0112332 33332
Q ss_pred -cccCCCcceee-e--ccccCCccccccCCccccc-cCCCCcccccccccccCCcccCccccCCCCCCCC-C------ee
Q psy18237 525 -SMSVSNSLACA-L--TPVLTRKISMSVSNSLACA-LTPVLTRKVATPVAVINDCIDLDECRMMSYLCRN-G------RC 592 (1050)
Q Consensus 525 -~~~~~~~~~C~-C--G~~g~~~~C~~~~~~~~C~-C~~G~~G~~C~~~~~~~~C~dideC~~~~~~C~n-g------~C 592 (1050)
..+.+.+.+|+ | +|+|.. |. |++||+|..+.. .+.+.|.. -.|.+ | .|
T Consensus 67 ~~~C~~~tG~C~~C~~g~~G~~-----------Ce~C~~Gy~g~~~~~-------~~~~~C~~--C~C~~~Gs~~~~~~C 126 (162)
T 1klo_A 67 VGNCNRLTGECLKCIYNTAGFY-----------CDRCKEGFFGNPLAP-------NPADKCKA--CACNPYGTVQQQSSC 126 (162)
T ss_dssp SCCBCTTTCCBCCBCTTEETTT-----------TCEECTTEEECTTCS-------SGGGSEEE--CCCCTTTBGGGCCCC
T ss_pred CCcccCCCCcccCCCCCCcCCC-----------cCcCchhhcCCcccc-------CCCCCCee--ccCCCCCccCCCCCC
Confidence 11223445553 5 555554 42 666666644321 12334544 44542 2 68
Q ss_pred ecCCCceEEecCCCeEeCCCCCccc
Q psy18237 593 RNNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 593 ~n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
....| +|.|++||+ |++|+
T Consensus 127 d~~tG--~C~C~~g~~----G~~Cd 145 (162)
T 1klo_A 127 NPVTG--QCQCLPHVS----GRDCG 145 (162)
T ss_dssp CTTTC--CCCBCTTEE----STTCC
T ss_pred CCCCC--EeECCCCCc----CCCCC
Confidence 76555 599999999 88886
No 77
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.72 E-value=2.3e-05 Score=78.21 Aligned_cols=123 Identities=20% Similarity=0.398 Sum_probs=68.4
Q ss_pred CCCC-CeeecCC--CceEE-ecCCCeEeCCCCCccccCccccccCCCCCccc--cCcccchhhhhcccCCcCCCCCcccc
Q psy18237 586 LCRN-GRCRNNI--GSFFC-ECLQGYTLASEGQYCRDVDECKEVNKRESRCY--LDTEEEEEEEEEEEGGYGGGSRRVTC 659 (1050)
Q Consensus 586 ~C~n-g~C~n~~--gsy~C-~C~~Gy~~~~~G~~C~~~~eC~~~~~~~~~C~--~~~~~c~~~~c~~~g~~~~~~~~~~C 659 (1050)
+|.| ++|+... +.++| .|++||+ |.+|+. |...-- +..+. .....|. +|...+.... ...+.|
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~----G~~Ce~---C~~g~~-g~~~~~~~~~~~C~--~C~C~~~~~~-~~~~~C 70 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTA----GKRCEL---CDDGYF-GDPLGSNGPVRLCR--PCQCNDNIDP-NAVGNC 70 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEE----STTSCE---ECTTEE-EETTCTTSSCEEEE--ECCSTTCBCT-TCSCCB
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCc----CCCCcC---CCCCCc-CCcccccCCCCCCe--eCcCCCCCCc-ccCCcc
Confidence 4664 6998766 67999 7999999 999982 322100 00000 0011221 1111110000 001223
Q ss_pred ccCCCCCCCcceee-cCCCCccCCCCCCCCCCCCCCCccccCCCCCCCCCCCC-------CCCCCCCCC------EEeec
Q psy18237 660 TKEIAGSTTRSTCC-CSIGKAWGPQCEECPAVGSDEHKTLCPGGSGYRPNSAT-------REGICPSPG------KCQNV 725 (1050)
Q Consensus 660 ~~~~~~~~~~~~C~-C~~G~~~G~~C~~c~~~~~~~~~~~Cp~g~g~~~~~~~-------~~~~C~~~g------~C~~~ 725 (1050)
+..+.+|. |.++| .|.+|+.|+ +||+++... .+..|.+.+ +|...
T Consensus 71 ------~~~tG~C~~C~~g~-~G~~Ce~C~--------------~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~ 129 (162)
T 1klo_A 71 ------NRLTGECLKCIYNT-AGFYCDRCK--------------EGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPV 129 (162)
T ss_dssp ------CTTTCCBCCBCTTE-ETTTTCEEC--------------TTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTT
T ss_pred ------cCCCCcccCCCCCC-cCCCcCcCc--------------hhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCC
Confidence 33456894 99998 899999765 345444322 345666654 67655
Q ss_pred CCCeEEeCCCCcccCCC
Q psy18237 726 MGSFICTCPPGYRLSPD 742 (1050)
Q Consensus 726 ~gsy~C~C~~Gy~g~~~ 742 (1050)
.| +|.|++||+|...
T Consensus 130 tG--~C~C~~g~~G~~C 144 (162)
T 1klo_A 130 TG--QCQCLPHVSGRDC 144 (162)
T ss_dssp TC--CCCBCTTEESTTC
T ss_pred CC--EeECCCCCcCCCC
Confidence 44 5999999998543
No 78
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.68 E-value=1.7e-05 Score=62.50 Aligned_cols=45 Identities=27% Similarity=0.648 Sum_probs=37.5
Q ss_pred cCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCcccccccccccc
Q psy18237 312 ATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMRRELCYL 357 (1050)
Q Consensus 312 ~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~~ 357 (1050)
+.+++.|.+ .|+|++|+|+|.|++||++..++++|.|+++..|..
T Consensus 2 ~~~ng~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~pCg~ 46 (51)
T 1kig_L 2 SLDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFPCGK 46 (51)
T ss_dssp CTTTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSSCTTC
T ss_pred CCCCCCcCC-EeEcCCCCeEEeCCCCcEECCCCCccccCCcccCCC
Confidence 344567764 899999999999999999999999999998865543
No 79
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.62 E-value=4.4e-05 Score=79.52 Aligned_cols=49 Identities=22% Similarity=0.548 Sum_probs=36.4
Q ss_pred ccccCCC------CcccccccccccCCcccCccccCC-CCCCC-C--CeeecCCCceEEecCCCeEeCCCCCccc
Q psy18237 553 ACALTPV------LTRKVATPVAVINDCIDLDECRMM-SYLCR-N--GRCRNNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 553 ~C~C~~G------~~G~~C~~~~~~~~C~dideC~~~-~~~C~-n--g~C~n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
+|.|.+| |+|..|+ .++++|... ..+|. + |+|+. .+|.|.+||+ |..|+
T Consensus 155 ~C~C~~gw~~~~~~~G~~Ce--------~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~----G~~C~ 213 (217)
T 2p28_B 155 QCLCHTSDVPGKLIYGQYCE--------CDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFE----GSACQ 213 (217)
T ss_dssp EEEECCCCSTTCCEESTTSC--------EESSCSCEETTEETTCTTTEEEET----TEEEECTTEE----STTSC
T ss_pred ceECCCCCCCcccEECCCcc--------cCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCc----cCCcC
Confidence 5888888 6887776 345667541 23687 5 89986 2799999999 88886
No 80
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.58 E-value=2.2e-05 Score=62.37 Aligned_cols=44 Identities=36% Similarity=0.779 Sum_probs=34.6
Q ss_pred ccCCCCCCCCCceecCCC-CeEEEcCCCCccCCCCCCCcCCCccccC
Q psy18237 237 CEEMPEICGSGTCENNIG-SFSCRCEDGYSVKPAEGPACTDENECTM 282 (1050)
Q Consensus 237 C~~~~~~C~~~~C~~~~g-~y~C~C~~Gy~g~~~~~~~C~~ideC~~ 282 (1050)
|+.+++.|++ .|+|+.| +|+|.|++||++. .|+++|+|||||.-
T Consensus 2 C~~~nggC~~-~C~n~~ggs~~C~C~~Gy~L~-~Dg~tC~d~dec~c 46 (53)
T 2bz6_L 2 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLL-ADGVSCTPTVEYPC 46 (53)
T ss_dssp TTSGGGGCSS-EEEEETTTEEEEECCTTEEEC-TTSSCEEECSSSCT
T ss_pred CcCCCCCcCC-EeEcCCCCCEEeeCCCCCEEC-CCCCcccCCccccC
Confidence 4444556765 7999999 7999999999987 57888888888753
No 81
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.57 E-value=1.8e-05 Score=64.59 Aligned_cols=43 Identities=33% Similarity=0.829 Sum_probs=34.6
Q ss_pred ecccccccCCCCCCCC---CceecCCCCeEEEcCCCCc-cCCCCCCCcCCCccc
Q psy18237 231 CRYINECEEMPEICGS---GTCENNIGSFSCRCEDGYS-VKPAEGPACTDENEC 280 (1050)
Q Consensus 231 c~~~~eC~~~~~~C~~---~~C~~~~g~y~C~C~~Gy~-g~~~~~~~C~~ideC 280 (1050)
+.++|||+.+| |.| |+|+++.++|+|.|++||+ |. .|+++++|
T Consensus 8 ~~~~d~C~snP--C~nga~gtC~~~~g~y~C~C~~Gy~~G~-----~C~~~~~C 54 (61)
T 2k2s_B 8 SETPAACSSNP--CGPEAAGTCKETNSGYICRCNQGYRISL-----DGTGNVTC 54 (61)
T ss_dssp TTSCCHHHHCS--SCSSSCCEEEECSSEEEEECCTTEEEEE-----CSSSCEEE
T ss_pred cCCCCcCcCCC--CcCCCccccccCCCceEeECCCCCccCC-----CCCCCCEe
Confidence 56789998655 986 5999999999999999999 87 35555555
No 82
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.54 E-value=5.2e-05 Score=60.19 Aligned_cols=45 Identities=29% Similarity=0.761 Sum_probs=37.2
Q ss_pred CcCCCCCCCCCeEeecCC-ceEEeCCCCCeeCCCCCccccccccccc
Q psy18237 311 CATSIQRCGEGFCVNDVG-TYHCVCPDGYMLLPSGKECIDMRRELCY 356 (1050)
Q Consensus 311 C~~~~~~C~~~~C~n~~G-sy~C~C~~G~~g~~~~~~C~d~~~~~C~ 356 (1050)
|+.+++.|++ .|+|++| +|+|.|++||++..|+++|.|+++..|.
T Consensus 2 C~~~nggC~~-~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~cg 47 (53)
T 2bz6_L 2 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCG 47 (53)
T ss_dssp TTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTT
T ss_pred CcCCCCCcCC-EeEcCCCCCEEeeCCCCCEECCCCCcccCCccccCC
Confidence 4444556764 8999999 8999999999999999999999886554
No 83
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.53 E-value=1.3e-05 Score=85.75 Aligned_cols=47 Identities=19% Similarity=0.516 Sum_probs=38.0
Q ss_pred cccccccCCCCCCC-CCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccC
Q psy18237 147 EEIDECNLMPNMCN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECE 195 (1050)
Q Consensus 147 ~di~eC~~~~~~C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~ 195 (1050)
+|||||+...++|+ +|+|+|++|+|+|.|++||+|+ |..|.|+|+..
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~Gn--G~~C~d~d~Pq 50 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGN--GRQCVAEGSPQ 50 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEEC--SSSEEETTCEE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCC--CCcCCCCCCCc
Confidence 57888886678898 7999999999999999999987 78999988743
No 84
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.50 E-value=2e-05 Score=84.31 Aligned_cols=45 Identities=20% Similarity=0.581 Sum_probs=37.2
Q ss_pred ccCccCcCCCCCCCC-CeEeecCCceEEeCCCCCeeCCCCCccccccc
Q psy18237 306 VDIDECATSIQRCGE-GFCVNDVGTYHCVCPDGYMLLPSGKECIDMRR 352 (1050)
Q Consensus 306 ~dideC~~~~~~C~~-~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~ 352 (1050)
+|||||+.+.+.|+. |.|+|+.|+|.|.|++||+| +|+.|.|+++
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~G--nG~~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG--NGRQCVAEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEE--CSSSEEETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCC--CCCcCCCCCC
Confidence 478888876788987 99999999999999999999 8899998765
No 85
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.45 E-value=3.4e-05 Score=62.92 Aligned_cols=46 Identities=15% Similarity=0.263 Sum_probs=39.0
Q ss_pred ccccccccccCCCccccCCC--ceeeCCCCCcccccccceeEeeCCCCc-cCCCCCCCCCCCCCCccccchhc
Q psy18237 442 QWRDAKKNQRLGFCYRSLTN--GRCVLPTGPALLMEVTRMDCCCTMGMA-WGPQCQLCPTRGSQTCEDINECL 511 (1050)
Q Consensus 442 ~C~d~~eC~~~~~C~~~~~~--g~C~~~~g~~~~~~~~~~~C~C~~Gy~-g~~~~~~c~~~~~~~C~~~~eC~ 511 (1050)
++.++|+|.. +||+ ++ |+|++..+ +|+|.|++||+ | ..|++.++|.
T Consensus 7 ~~~~~d~C~s-nPC~---nga~gtC~~~~g--------~y~C~C~~Gy~~G------------~~C~~~~~C~ 55 (61)
T 2k2s_B 7 LSETPAACSS-NPCG---PEAAGTCKETNS--------GYICRCNQGYRIS------------LDGTGNVTCI 55 (61)
T ss_dssp CTTSCCHHHH-CSSC---SSSCCEEEECSS--------EEEEECCTTEEEE------------ECSSSCEEEE
T ss_pred hcCCCCcCcC-CCCc---CCCccccccCCC--------ceEeECCCCCccC------------CCCCCCCEec
Confidence 4678899987 8999 88 89999999 99999999999 8 5676666664
No 86
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.36 E-value=0.00018 Score=57.14 Aligned_cols=38 Identities=26% Similarity=0.739 Sum_probs=30.9
Q ss_pred ccccccC-CCCCCCC-Ceee--cCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 148 EIDECNL-MPNMCNH-GTCM--NTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 148 di~eC~~-~~~~C~~-~~C~--~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
+|++|.. ..++|+| |+|+ +..++|+|.|++||+ |.+|+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCC
Confidence 5778873 1248985 8998 889999999999998 77897
No 87
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.32 E-value=0.0001 Score=56.59 Aligned_cols=38 Identities=29% Similarity=0.756 Sum_probs=30.3
Q ss_pred ccccccC-CCCCCCCCeeecCC--CCeEeeCCCCCeeCCCCCCCc
Q psy18237 148 EIDECNL-MPNMCNHGTCMNTP--GSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 148 di~eC~~-~~~~C~~~~C~~~~--g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
+|++|.. ..++|.||+|++.. ++|.|.|++||+ |.+|+
T Consensus 2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCC
Confidence 5777872 23899989998754 689999999999 77887
No 88
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.28 E-value=0.00013 Score=57.94 Aligned_cols=39 Identities=31% Similarity=0.856 Sum_probs=32.9
Q ss_pred cCccccC-CCCCCCC-Ceee--cCCCceEEecCCCeEeCCCCCcccc
Q psy18237 576 DLDECRM-MSYLCRN-GRCR--NNIGSFFCECLQGYTLASEGQYCRD 618 (1050)
Q Consensus 576 dideC~~-~~~~C~n-g~C~--n~~gsy~C~C~~Gy~~~~~G~~C~~ 618 (1050)
||++|.. ..++|+| |+|+ +..++|+|.|++||+ |.+|+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence 5788886 1348997 6999 889999999999999 999973
No 89
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.28 E-value=9.6e-05 Score=56.70 Aligned_cols=39 Identities=31% Similarity=0.822 Sum_probs=32.1
Q ss_pred cCccccC-CCCCCCCCeeecCC--CceEEecCCCeEeCCCCCcccc
Q psy18237 576 DLDECRM-MSYLCRNGRCRNNI--GSFFCECLQGYTLASEGQYCRD 618 (1050)
Q Consensus 576 dideC~~-~~~~C~ng~C~n~~--gsy~C~C~~Gy~~~~~G~~C~~ 618 (1050)
+|++|.. ..++|.||+|++.. ++|+|.|++||+ |.+|+.
T Consensus 2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSCC
T ss_pred ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCCc
Confidence 5778865 34789999999754 789999999999 999973
No 90
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.23 E-value=0.00021 Score=57.98 Aligned_cols=45 Identities=31% Similarity=0.678 Sum_probs=36.1
Q ss_pred CcCCCCCCCCCeEeecC-CceEEeCCCCCeeCCCCCccccccccccc
Q psy18237 311 CATSIQRCGEGFCVNDV-GTYHCVCPDGYMLLPSGKECIDMRRELCY 356 (1050)
Q Consensus 311 C~~~~~~C~~~~C~n~~-Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~ 356 (1050)
|+.+++.|.+ .|+|++ |+|+|.|++||.+..|+++|.|+.+..|.
T Consensus 2 C~~~nggC~~-~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~~pC~ 47 (59)
T 2wph_E 2 CNIKNGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCG 47 (59)
T ss_dssp TTTGGGGCSS-EEEECSTTCEEEECCTTEEECTTSSCEEESSSSCTT
T ss_pred CcCCCCCcCC-EeEeCCCCCEEeeCCCCcEECCCCCcccCCCCCCCC
Confidence 3344556764 899999 69999999999999999999998765443
No 91
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.20 E-value=0.00029 Score=53.83 Aligned_cols=32 Identities=25% Similarity=0.623 Sum_probs=26.6
Q ss_pred CCCCC-Ceee--cCCCCeEeeCCCCCeeCCCCCCCc-cCC
Q psy18237 157 NMCNH-GTCM--NTPGSFHCQCNRGFLYDSDTHQCI-DIN 192 (1050)
Q Consensus 157 ~~C~~-~~C~--~~~g~y~C~C~~Gy~~~~~g~~C~-d~~ 192 (1050)
++|+| |+|+ +..++|+|.|++||+ |.+|+ +++
T Consensus 9 ~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~~~~ 44 (45)
T 1a3p_A 9 GYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQTRDL 44 (45)
T ss_dssp SCCSSSCEEEECTTTSSEEEECCTTEE----TTTTCEECC
T ss_pred CCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCCcccC
Confidence 38885 8997 788999999999999 77897 554
No 92
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.19 E-value=0.00032 Score=53.59 Aligned_cols=29 Identities=34% Similarity=0.919 Sum_probs=26.0
Q ss_pred CCCCC-Ceee--cCCCceEEecCCCeEeCCCCCccc
Q psy18237 585 YLCRN-GRCR--NNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 585 ~~C~n-g~C~--n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
++|+| |+|+ +..++|+|.|++||+ |.+|+
T Consensus 9 ~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 9 GYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp SCCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 48987 6998 788999999999999 99997
No 93
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.12 E-value=0.00038 Score=72.41 Aligned_cols=102 Identities=29% Similarity=0.610 Sum_probs=64.0
Q ss_pred CCC-CCCeEecCCCceEEecCCCCcCCCCCCccccccCCCCCCCccCccccCC--CCCCCC-CccccCCCceeeecCCC-
Q psy18237 817 NIC-GNGTCTNLNGGFECTCSEGYAPGPLGSCAILLTLPPISPSTDIDECYER--PGICAN-GDCANFQGSFQCTCANG- 891 (1050)
Q Consensus 817 ~~C-~~g~C~~~~g~~~C~C~~Gy~g~~~~~C~~~~~~~~~~~C~~~~eC~~~--~~~C~n-g~C~~~~gsy~C~C~~G- 891 (1050)
..| .+|+|+. .+|.|++||+|..+. |....... .+ ....|... ...|.+ |+|+. .+|.|.+|
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G~~G~~Ce-c~~~~~~~---~~-~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw 162 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTGYIGKNCE-CQTQGRSS---QE-LEGSCRKDNNSIICSGLGDCVC----GQCLCHTSD 162 (217)
T ss_dssp CTTTTSEEEET----TEEEECTTEESTTSC-EECCCCC----GG-GGGGGBSSTTSCBGGGTEEEET----TEEEECCCC
T ss_pred CccCCCceEEC----CEEECCCCccCCccc-ccCccccc---cc-CCCcCCCCCCCCCCCCCCEEeC----CceECCCCC
Confidence 567 6899985 289999999998432 11100000 00 01234321 345774 88985 38999999
Q ss_pred -----ceeCCCCCCcccCCccCCC-CCCCC-C--CEEeeCCCCeEEecCCCceeCC
Q psy18237 892 -----YTLNTARDSCVDIDECARH-PNICN-N--GTCVNAIGSFKCHCYAGFKLSH 938 (1050)
Q Consensus 892 -----y~g~~~~~~C~~ideC~~~-~~~C~-~--g~C~n~~g~y~C~C~~Gy~g~~ 938 (1050)
|+|..++ .+++.|... ...|. + |+|+. + +|.|.+||+|..
T Consensus 163 ~~~~~~~G~~Ce---~~~~~C~~~~g~~C~~~~~G~C~~--g--~C~C~~G~~G~~ 211 (217)
T 2p28_B 163 VPGKLIYGQYCE---CDTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGFEGSA 211 (217)
T ss_dssp STTCCEESTTSC---EESSCSCEETTEETTCTTTEEEET--T--EEEECTTEESTT
T ss_pred CCcccEECCCcc---cCCccCCCCCCCCCCCCCCcEEeC--C--eeECCCCCccCC
Confidence 5775543 145677643 11377 5 89985 2 899999999986
No 94
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.04 E-value=0.00037 Score=57.51 Aligned_cols=42 Identities=31% Similarity=0.680 Sum_probs=34.8
Q ss_pred CccccCCCCCCCC-Ceeec-----CCCceEEecCCCeEeCCCCCccc-cCccccc
Q psy18237 577 LDECRMMSYLCRN-GRCRN-----NIGSFFCECLQGYTLASEGQYCR-DVDECKE 624 (1050)
Q Consensus 577 ideC~~~~~~C~n-g~C~n-----~~gsy~C~C~~Gy~~~~~G~~C~-~~~eC~~ 624 (1050)
.|+|.. ++|+| |+|++ ..++|+|.|++||+ |.+|+ +++++..
T Consensus 6 c~~C~~--~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 6 CAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKVQ 54 (63)
T ss_dssp CCHHHH--TTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCEECCSSCT
T ss_pred cCCCCC--CcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccCcCcCcccc
Confidence 467876 78997 69996 67899999999999 99997 7776654
No 95
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.94 E-value=0.00032 Score=57.84 Aligned_cols=42 Identities=24% Similarity=0.696 Sum_probs=34.0
Q ss_pred cccccCCCCCCCC-Ceeec-----CCCCeEeeCCCCCeeCCCCCCCc-cCCccCC
Q psy18237 149 IDECNLMPNMCNH-GTCMN-----TPGSFHCQCNRGFLYDSDTHQCI-DINECEE 196 (1050)
Q Consensus 149 i~eC~~~~~~C~~-~~C~~-----~~g~y~C~C~~Gy~~~~~g~~C~-d~~eC~~ 196 (1050)
.|+|. .++|+| |+|++ ..++|+|.|++||+ |.+|+ +|+++..
T Consensus 6 c~~C~--~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 6 CAEKE--KTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKVQ 54 (63)
T ss_dssp CCHHH--HTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCEECCSSCT
T ss_pred cCCCC--CCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccCcCcCcccc
Confidence 45665 677875 78986 67899999999999 78997 8888864
No 96
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.86 E-value=0.00019 Score=56.72 Aligned_cols=40 Identities=25% Similarity=0.683 Sum_probs=32.9
Q ss_pred cccccCCCCcccccccccccCCcccCccccCCCCCCCC-Ceeec----CCCceEEecCCCeEeCCCCCccc
Q psy18237 552 LACALTPVLTRKVATPVAVINDCIDLDECRMMSYLCRN-GRCRN----NIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 552 ~~C~C~~G~~G~~C~~~~~~~~C~dideC~~~~~~C~n-g~C~n----~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
++|.|++||+. ++|+| |+|++ ..++|+|+|++||+ |.+|+
T Consensus 3 ~~C~C~~g~~~----------------------~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 3 PTYKCPETFDA----------------------WYCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp CCBCCCHHHHH----------------------HTSCTTCEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred eeeECCCCCcC----------------------CcCCCCCEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 46889999841 57887 69996 45789999999999 99997
No 97
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=96.85 E-value=0.00079 Score=54.60 Aligned_cols=36 Identities=28% Similarity=0.683 Sum_probs=31.0
Q ss_pred CCCCCCeeecCC-CceEEecCCCeEeCCCCCccccCcc
Q psy18237 585 YLCRNGRCRNNI-GSFFCECLQGYTLASEGQYCRDVDE 621 (1050)
Q Consensus 585 ~~C~ng~C~n~~-gsy~C~C~~Gy~~~~~G~~C~~~~e 621 (1050)
..|++ .|+|++ |+|+|.|++||.|.++++.|+++++
T Consensus 7 ggC~~-~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~ 43 (59)
T 2wph_E 7 GRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVP 43 (59)
T ss_dssp GGCSS-EEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred CCcCC-EeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence 45653 799999 6999999999999999999998763
No 98
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.83 E-value=0.0003 Score=82.25 Aligned_cols=45 Identities=31% Similarity=0.703 Sum_probs=34.8
Q ss_pred ccccCCCCcccccccccccCCcccCccccCCCCCCCCCeeecCCCceEEecCCCeEeCCCCCccc
Q psy18237 553 ACALTPVLTRKVATPVAVINDCIDLDECRMMSYLCRNGRCRNNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 553 ~C~C~~G~~G~~C~~~~~~~~C~dideC~~~~~~C~ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
...|.++|.|..|+ +++|.. +|.||+|++. ++|.|++||+ |..|+
T Consensus 378 p~~C~~~~~g~~c~----------~~~C~~---~C~nG~C~~~---~~C~C~~G~~----G~~C~ 422 (463)
T 2wg3_C 378 PEECRATVQPAQTL----------TSECSR---LCRNGYCTPT---GKCCCSPGWE----GDFCR 422 (463)
T ss_dssp CGGGCCCCCCCCCC----------CCHHHH---HCCSEEECTT---SCEEECTTEE----STTSC
T ss_pred cccCCCCCcCCCCc----------cccccC---CCCCCccCCC---CeECCCCCcC----CCcCC
Confidence 36788888886664 567865 4889999864 4799999999 88885
No 99
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.68 E-value=0.0012 Score=58.47 Aligned_cols=66 Identities=18% Similarity=0.541 Sum_probs=48.3
Q ss_pred CCCC-CCeeec-CCCCeEeeCCCCCeeCCCCCCCccC--CccCCCCCCCCCCcccccCCCCccccCCCccccCCCceeec
Q psy18237 157 NMCN-HGTCMN-TPGSFHCQCNRGFLYDSDTHQCIDI--NECEEMPEICGSGTYINECEEMPEICGSGTCENNIGSFSCR 232 (1050)
Q Consensus 157 ~~C~-~~~C~~-~~g~y~C~C~~Gy~~~~~g~~C~d~--~eC~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~g~~~c~ 232 (1050)
..|. ||.|.+ .+|.++|+|.+||.++ |..|..+ +.|+.+
T Consensus 10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gd--g~~Cv~~~~~sC~~n----------------------------------- 52 (99)
T 1ob1_C 10 KQCPQNSGCFRHLDEREECKCLLNYKQE--GDKCVENPNPTCNEN----------------------------------- 52 (99)
T ss_dssp CCCCTTEEEECCTTSCCEEEECTTEEEE--TTEEEECSCCCSTTG-----------------------------------
T ss_pred CCCCCCCCeEEcCCCCEEEEecCCeecC--CCeEeeCCCCChhhc-----------------------------------
Confidence 3455 899987 4789999999999986 6778855 345432
Q ss_pred ccccccCCCCCCC-CCceecCC-----CCeEEEcCCCCccC
Q psy18237 233 YINECEEMPEICG-SGTCENNI-----GSFSCRCEDGYSVK 267 (1050)
Q Consensus 233 ~~~eC~~~~~~C~-~~~C~~~~-----g~y~C~C~~Gy~g~ 267 (1050)
++.|. ||+|..+. +...|.|.+||.-.
T Consensus 53 --------NGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~ 85 (99)
T 1ob1_C 53 --------NGGCDADAKCTEEDSGSNGKKITCECTKPDSYP 85 (99)
T ss_dssp --------GGGCCTTEEEECCSCSSSSCCCEEEECSTTCCE
T ss_pred --------CCCcCCCceeEecCCcccCCceEeEeCCCCccc
Confidence 34454 68887663 56899999998643
No 100
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.64 E-value=0.00037 Score=55.00 Aligned_cols=29 Identities=17% Similarity=0.466 Sum_probs=24.4
Q ss_pred CCCCCCCCEEee----cCCCeEEeCCCCcccCC
Q psy18237 713 EGICPSPGKCQN----VMGSFICTCPPGYRLSP 741 (1050)
Q Consensus 713 ~~~C~~~g~C~~----~~gsy~C~C~~Gy~g~~ 741 (1050)
+++|.|+|+|++ ..++|+|+|++||+|..
T Consensus 13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~ 45 (52)
T 3ca7_A 13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQR 45 (52)
T ss_dssp HHTSCTTCEEEEEEETTEEEEEEECCTTEESTT
T ss_pred CCcCCCCCEEecCccCCCCCEEEECCCCCcCCC
Confidence 468999999996 35689999999999853
No 101
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=96.60 E-value=0.0025 Score=56.71 Aligned_cols=65 Identities=22% Similarity=0.449 Sum_probs=49.8
Q ss_pred CCC-CCeeec-CCCCeEeeCCCCCeeCCCCCCCccCCc-cCCCCCCCCCCcccccCCCCccccCCCccccCCCceeeccc
Q psy18237 158 MCN-HGTCMN-TPGSFHCQCNRGFLYDSDTHQCIDINE-CEEMPEICGSGTYINECEEMPEICGSGTCENNIGSFSCRYI 234 (1050)
Q Consensus 158 ~C~-~~~C~~-~~g~y~C~C~~Gy~~~~~g~~C~d~~e-C~~~~~~C~~g~C~~~C~~g~~~c~~~~C~~~~g~~~c~~~ 234 (1050)
.|. ||.|.. .+|..+|+|..||.++ |..|..+++ |+.+
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~d--g~~Cv~~Np~C~~n------------------------------------- 57 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEV--GGKCVPASITCEEN------------------------------------- 57 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEEC--SSSEEECCCCTTSG-------------------------------------
T ss_pred CCCCCCCeEECCCCCEeEEEECCeecc--CCEEEECCcchhhc-------------------------------------
Confidence 455 899987 7899999999999986 778886666 5442
Q ss_pred ccccCCCCCCC-CCceecCC-CCeEEEcCCCCccC
Q psy18237 235 NECEEMPEICG-SGTCENNI-GSFSCRCEDGYSVK 267 (1050)
Q Consensus 235 ~eC~~~~~~C~-~~~C~~~~-g~y~C~C~~Gy~g~ 267 (1050)
.+.|. +|+|+.+. ....|.|.+||.-.
T Consensus 58 ------NGGCd~nAeC~~~~~~ki~C~C~~~~~~~ 86 (105)
T 1n1i_A 58 ------NGGCAPEAECTMDDKKEVECKCTKEGSEP 86 (105)
T ss_dssp ------GGGSCTTSEEEECTTSCEEEECCSTTCCE
T ss_pred ------CCCcCCCcEeEECCCCEEEeECCCCCCcc
Confidence 33454 68898774 77899999998643
No 102
>1apj_A Fibrillin; microfibril, TB module, marfan syndrome, connective tissue, novel fold, extracellular matrix; NMR {Homo sapiens} SCOP: g.23.1.1
Probab=96.59 E-value=0.00016 Score=61.31 Aligned_cols=54 Identities=30% Similarity=0.842 Sum_probs=47.4
Q ss_pred ccccccCCCCCCCcceeecC-CCCccCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q psy18237 656 RVTCTKEIAGSTTRSTCCCS-IGKAWGPQCEECPAVGSDEHKTLCPGGSGYRPNS 709 (1050)
Q Consensus 656 ~~~C~~~~~~~~~~~~C~C~-~G~~~G~~C~~c~~~~~~~~~~~Cp~g~g~~~~~ 709 (1050)
++.|..+....+++.+|.|. +|.+||.+|+.||..++.+|+.+||.|.||..+.
T Consensus 16 ~g~C~~p~~~~~tk~~CCCs~~G~aWG~~Ce~CP~~gs~ef~~lCP~G~G~~~~~ 70 (74)
T 1apj_A 16 GGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPYGSGIIVGP 70 (74)
T ss_dssp SSCEEEEEEEEEEHHHHHTTSCCSEETTTTEECCCTTSHHHHHHCSSCSCSSCCT
T ss_pred CCcccCCCCCCccccccccCCCCCccCCCcccCCCCChHHHHhhCcCCCcccCCC
Confidence 35687777777888999999 7999999999999999999999999999997653
No 103
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.48 E-value=0.0011 Score=66.38 Aligned_cols=45 Identities=33% Similarity=0.912 Sum_probs=38.5
Q ss_pred cccCccccCCCCC---CCCCeeecCCCceEEecCCCeEeCCCCCccccC
Q psy18237 574 CIDLDECRMMSYL---CRNGRCRNNIGSFFCECLQGYTLASEGQYCRDV 619 (1050)
Q Consensus 574 C~dideC~~~~~~---C~ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~~~ 619 (1050)
++|++||...... |.+ .|+|+.|+|+|.|++||++..+++.|+++
T Consensus 121 ~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 121 AEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp EEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred ccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 4789999874433 876 89999999999999999999999999865
No 104
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.26 E-value=0.0027 Score=63.54 Aligned_cols=45 Identities=33% Similarity=0.832 Sum_probs=35.8
Q ss_pred cccCccCcCCCCC---CCCCeEeecCCceEEeCCCCCeeCCCCCccccc
Q psy18237 305 CVDIDECATSIQR---CGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDM 350 (1050)
Q Consensus 305 C~dideC~~~~~~---C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~ 350 (1050)
+.|++||...++. |++ .|+|+.|+|+|.|++||++..++++|.++
T Consensus 121 ~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 121 AEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp EEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred ccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 4566777654433 875 89999999999999999998888888754
No 105
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.26 E-value=0.00099 Score=77.89 Aligned_cols=75 Identities=29% Similarity=0.620 Sum_probs=33.8
Q ss_pred CCCCCCcCcccccccCCC---CCCcccCCCCCCceeecCCCcccCCCCCCccccCCCCCCCCCCCCeeccCCCCcccCCC
Q psy18237 67 TAWLPTFTNVTTLTNVTS---TNEYVTGDNVITRWCVCDEGFRGDGYSCEDIDECTDNTNYCDYILLCGSKPGEFMNPMT 143 (1050)
Q Consensus 67 ~~c~~g~~g~~c~~~~~~---~n~~~c~~~~g~~~C~C~~G~~g~~~~C~d~~eC~~~~~~C~~~~~C~n~~gs~~~~~~ 143 (1050)
..|..+|.|+.|+...|. .| +.|.+. ++|.|++||+|. .|+ +++|.. +|.|+
T Consensus 379 ~~C~~~~~g~~c~~~~C~~~C~n-G~C~~~---~~C~C~~G~~G~--~C~-~~~C~~---~C~~~--------------- 433 (463)
T 2wg3_C 379 EECRATVQPAQTLTSECSRLCRN-GYCTPT---GKCCCSPGWEGD--FCR-TAKCEP---ACRHG--------------- 433 (463)
T ss_dssp GGGCCCCCCCCCCCCHHHHHCCS-EEECTT---SCEEECTTEEST--TSC-EECC-------------------------
T ss_pred ccCCCCCcCCCCccccccCCCCC-CccCCC---CeECCCCCcCCC--cCC-cCcCCC---CCCCC---------------
Confidence 578999999988765442 46 577643 579999999997 785 567763 46655
Q ss_pred CCccccccccCCCCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCCccC
Q psy18237 144 NKTEEIDECNLMPNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCIDI 191 (1050)
Q Consensus 144 g~~~di~eC~~~~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~ 191 (1050)
|+|++. |+|.|++||+ |..|+..
T Consensus 434 ------------------g~C~~~---~~C~C~~G~~----G~~C~~~ 456 (463)
T 2wg3_C 434 ------------------GVCVRP---NKCLCKKGYL----GPQCEQV 456 (463)
T ss_dssp ------------------------------------------------
T ss_pred ------------------CEECCC---CEEECCCCcc----cCCCCCC
Confidence 455543 5899999999 7788743
No 106
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.07 E-value=0.0053 Score=54.30 Aligned_cols=61 Identities=25% Similarity=0.605 Sum_probs=50.5
Q ss_pred CCCeEeec-CCceeeeCCCCCeeCCCCCcccccccC--CcccCCCCCCC-CCeEEecC-----CCeEeecCCCCc
Q psy18237 984 LYGNCTNT-LGSFSCTCPPNYQLTPAGNACVVLEDI--NECEEHDNICE-NGHCTNTF-----GSFMCSCQDGFK 1049 (1050)
Q Consensus 984 ~~g~C~~~-~g~y~C~C~~Gy~~~~~g~~C~~~~di--deC~~~~~~C~-~g~C~n~~-----gsy~C~C~~Gy~ 1049 (1050)
.++.|... .+...|.|.+||.++ |..|+ .+ +.|+..+..|. +|+|+.+. +...|.|.+||.
T Consensus 14 ~NA~C~r~~~g~e~C~C~~gy~gd--g~~Cv---~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 14 QNSGCFRHLDEREECKCLLNYKQE--GDKCV---ENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp TTEEEECCTTSCCEEEECTTEEEE--TTEEE---ECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CCCCeEEcCCCCEEEEecCCeecC--CCeEe---eCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 67788874 688999999999986 78893 33 67987777899 99999885 568999999974
No 107
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.87 E-value=0.015 Score=51.80 Aligned_cols=63 Identities=21% Similarity=0.430 Sum_probs=52.4
Q ss_pred CC-CCCeEee-cCCceeeeCCCCCeeCCCCCcccccccCCc-ccCCCCCCC-CCeEEecC-CCeEeecCCCCc
Q psy18237 982 AC-LYGNCTN-TLGSFSCTCPPNYQLTPAGNACVVLEDINE-CEEHDNICE-NGHCTNTF-GSFMCSCQDGFK 1049 (1050)
Q Consensus 982 ~C-~~g~C~~-~~g~y~C~C~~Gy~~~~~g~~C~~~~dide-C~~~~~~C~-~g~C~n~~-gsy~C~C~~Gy~ 1049 (1050)
.| .++.|.. .+|...|.|.+||.++ |..| +.++. |..+..-|. +|.|+.+. .--.|.|.+||+
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~d--g~~C---v~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEV--GGKC---VPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEEC--SSSE---EECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred CCCCCCCeEECCCCCEeEEEECCeecc--CCEE---EECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 45 6789988 6788999999999986 8889 45587 877767899 99999986 778999999974
No 108
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.72 E-value=0.0054 Score=48.42 Aligned_cols=30 Identities=30% Similarity=0.947 Sum_probs=26.6
Q ss_pred CCCCCC-Ceee--cCCCceEEecCCCeEeCCCCCccc
Q psy18237 584 SYLCRN-GRCR--NNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 584 ~~~C~n-g~C~--n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
.++|.| |+|+ +..++|+|+|++||+ |.+|+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCc----CCCCC
Confidence 478987 6998 778899999999999 99997
No 109
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.64 E-value=0.0035 Score=62.12 Aligned_cols=37 Identities=27% Similarity=0.824 Sum_probs=30.3
Q ss_pred CCCCC-CCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCC
Q psy18237 156 PNMCN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEE 196 (1050)
Q Consensus 156 ~~~C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~ 196 (1050)
+++|+ +++|++..++|+|.|++||+ |..|++++||..
T Consensus 124 ~~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~~ 161 (162)
T 1g1s_A 124 DMSCSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDDD 161 (162)
T ss_dssp TTGGGGSEEEEECSSSEEEEECTTEE----STTSCEECC---
T ss_pred CCCCCCCCEEecCCCCceEeCCCCCc----CcccccCcccCC
Confidence 56777 58999999999999999999 778998889864
No 110
>1ksq_A Latent transforming growth factor beta binding protein 1; structure, LTBP-1, TGF-beta, TB domain, latency associated propeptide, LAP; NMR {Homo sapiens} SCOP: g.23.1.1
Probab=95.19 E-value=0.0023 Score=54.21 Aligned_cols=52 Identities=38% Similarity=1.081 Sum_probs=47.4
Q ss_pred cccccCCCCCCCcceeecCCCCccCCCCCC--CCCCCCCCCccccCCCCCCCCC
Q psy18237 657 VTCTKEIAGSTTRSTCCCSIGKAWGPQCEE--CPAVGSDEHKTLCPGGSGYRPN 708 (1050)
Q Consensus 657 ~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~--c~~~~~~~~~~~Cp~g~g~~~~ 708 (1050)
+.|+.++...+++.+|.|..|.+||..|+. ||..++.+|..+||.|.||..+
T Consensus 20 ~~Cs~pl~~~~tk~~CCC~~G~~WG~~ce~~~CP~~gt~~f~~lCP~G~G~~~~ 73 (75)
T 1ksq_A 20 SLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMCPKGKGFVPA 73 (75)
T ss_dssp TTCBCSSCCEEEHHHHHHTCCSEEEETTEEEECCCSSSHHHHHHCSSCSCCSSS
T ss_pred CcCCCcccCccccccccccccCccCCCCCccCCCCCCHHHHHhcCCCCcccCcC
Confidence 578888888888999999999999999997 9999999999999999998644
No 111
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.11 E-value=0.0083 Score=59.36 Aligned_cols=41 Identities=29% Similarity=0.839 Sum_probs=33.1
Q ss_pred ccccCCCCCCCC-CeeecCCCceEEecCCCeEeCCCCCccccCccccc
Q psy18237 578 DECRMMSYLCRN-GRCRNNIGSFFCECLQGYTLASEGQYCRDVDECKE 624 (1050)
Q Consensus 578 deC~~~~~~C~n-g~C~n~~gsy~C~C~~Gy~~~~~G~~C~~~~eC~~ 624 (1050)
++|.. .+|++ |+|++..++|+|+|++||+ |..|+.+++|..
T Consensus 120 ~~c~~--~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~~ 161 (162)
T 1g1s_A 120 ASCQD--MSCSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDDD 161 (162)
T ss_dssp CCCCT--TGGGGSEEEEECSSSEEEEECTTEE----STTSCEECC---
T ss_pred CCCcC--CCCCCCCEEecCCCCceEeCCCCCc----CcccccCcccCC
Confidence 45655 67885 7999999999999999999 999998888863
No 112
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=94.75 E-value=0.01 Score=67.29 Aligned_cols=93 Identities=18% Similarity=0.335 Sum_probs=29.8
Q ss_pred CCCCCcccCCCCCCceeecCCCcccCCCCCCccccCCCCC--CCCCCCCeeccCCC-Ccc--cCCCCCccccccccCCCC
Q psy18237 83 TSTNEYVTGDNVITRWCVCDEGFRGDGYSCEDIDECTDNT--NYCDYILLCGSKPG-EFM--NPMTNKTEEIDECNLMPN 157 (1050)
Q Consensus 83 ~~~n~~~c~~~~g~~~C~C~~G~~g~~~~C~d~~eC~~~~--~~C~~~~~C~n~~g-s~~--~~~~g~~~di~eC~~~~~ 157 (1050)
|..+...|....|+++|.|+.+|+|. .|+ .|..+- .++.++..|....| ++. ...-+. .-+.|.....
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~ttG~--~CE---~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~--~g~~CD~~t~ 371 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHNTTGP--DCG---KCKKNYQGRPWSPGSYLPIPKGAANACIPSISSI--GTNVCDNELL 371 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTTEESS--SSC---EECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC--------------
T ss_pred CCCchhhcCCCCCCceeeCCCCCcCC--Ccc---ccccccccCcccCCcccccCCCCCCcccCCCCCC--CcCccccCcc
Confidence 44677788888888999999999997 665 344321 23443321110001 000 000000 0123443346
Q ss_pred CCCC-CeeecCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 158 MCNH-GTCMNTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 158 ~C~~-~~C~~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
+|+| |+|++.. +|.|++||. |..|+
T Consensus 372 ~C~ngg~C~~~~---~C~C~~G~~----G~~Ce 397 (426)
T 3zyj_B 372 HCQNGGTCHNNV---RCLCPAAYT----GILCE 397 (426)
T ss_dssp ---------------------------------
T ss_pred cCCCCCCcCCCC---CCcCCCCCc----CCCCc
Confidence 7874 7898766 899999999 56676
No 113
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=94.69 E-value=0.019 Score=45.22 Aligned_cols=26 Identities=27% Similarity=0.842 Sum_probs=23.3
Q ss_pred CCccccCCCceee--CCCCCcccccccceeEeeCCCCcc
Q psy18237 453 GFCYRSLTNGRCV--LPTGPALLMEVTRMDCCCTMGMAW 489 (1050)
Q Consensus 453 ~~C~~~~~~g~C~--~~~g~~~~~~~~~~~C~C~~Gy~g 489 (1050)
++|. |+|+|+ +..+ +|.|.|++||+|
T Consensus 12 ~pC~---nGG~C~~~~~~~--------~~~C~C~~GytG 39 (53)
T 1nql_B 12 GYCL---HDGVCMYIEALD--------KYACNCVVGYIG 39 (53)
T ss_dssp CEEC---TTCEEEEETTTT--------EEEEEECTTEES
T ss_pred CCCC---CCeEEeeecCCC--------CEEEecCCCCcC
Confidence 7899 999998 5666 899999999999
No 114
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=94.66 E-value=0.015 Score=66.03 Aligned_cols=88 Identities=24% Similarity=0.494 Sum_probs=27.0
Q ss_pred CeEecCCCceEEecCCCCcCCCCCCccccccCCCC-------------CCCcc------CccccCCCCCCCC-CccccCC
Q psy18237 822 GTCTNLNGGFECTCSEGYAPGPLGSCAILLTLPPI-------------SPSTD------IDECYERPGICAN-GDCANFQ 881 (1050)
Q Consensus 822 g~C~~~~g~~~C~C~~Gy~g~~~~~C~~~~~~~~~-------------~~C~~------~~eC~~~~~~C~n-g~C~~~~ 881 (1050)
..|....++++|.|+.+++|..+..|..++...+- ..|+. ...|.....+|.| ++|++..
T Consensus 304 s~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ngg~C~~~~ 383 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGTCHNNV 383 (426)
T ss_dssp SCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------------
T ss_pred hhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCCCCCcCCCC
Confidence 46877777889999999999988777766542211 12321 2345444456776 7888765
Q ss_pred CceeeecCCCceeCCCCCCcccCCccCCCCCCCC-CCEEeeCCC
Q psy18237 882 GSFQCTCANGYTLNTARDSCVDIDECARHPNICN-NGTCVNAIG 924 (1050)
Q Consensus 882 gsy~C~C~~Gy~g~~~~~~C~~ideC~~~~~~C~-~g~C~n~~g 924 (1050)
+|+|++||+|..++ . ..|. +|+|+...|
T Consensus 384 ---~C~C~~G~~G~~Ce----------~--c~C~~~g~C~~~~G 412 (426)
T 3zyj_B 384 ---RCLCPAAYTGILCE----------K--LRCEEAGSCGSDSG 412 (426)
T ss_dssp --------------------------------------------
T ss_pred ---CCcCCCCCcCCCCc----------C--CCCCCCCcccCCCC
Confidence 89999999996543 1 1255 567776665
No 115
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=94.40 E-value=0.016 Score=63.04 Aligned_cols=50 Identities=28% Similarity=0.725 Sum_probs=41.0
Q ss_pred cCccCcCC-CCCCCCCeEeecCCceEEeCCCCCeeCCCCCcccccccccccc
Q psy18237 307 DIDECATS-IQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMRRELCYL 357 (1050)
Q Consensus 307 dideC~~~-~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~~~C~~ 357 (1050)
++|||..+ ++.|.+ .|+|+.|+|+|.|++||.+..++++|.+.++..|-.
T Consensus 1 ~~~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~ 51 (283)
T 3f1s_B 1 AKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGV 51 (283)
T ss_dssp --CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTC
T ss_pred CCCccCCCCCCCCCC-EeeCCCCCeEecCCCCcccCCCCCccccccccccCc
Confidence 46788776 678885 899999999999999999999999999877766543
No 116
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.19 E-value=0.037 Score=54.46 Aligned_cols=44 Identities=39% Similarity=0.792 Sum_probs=34.1
Q ss_pred cccCccCcCC-CCCCCCCeEeecCCceEEeCCCCCeeCCCCCcccc
Q psy18237 305 CVDIDECATS-IQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECID 349 (1050)
Q Consensus 305 C~dideC~~~-~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d 349 (1050)
+.|+|||... ...|. ..|+|..|+|+|.|++||++..++++|.+
T Consensus 114 ~~d~~eC~~~~~~~C~-~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 114 ATDINECTDFVDVPCS-HFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp EEECCTTTC-CCCCSS-SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cccCcccCCCCCCCCC-CcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 4566777642 24576 48999999999999999999888888754
No 117
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.92 E-value=0.022 Score=64.01 Aligned_cols=43 Identities=33% Similarity=0.830 Sum_probs=28.1
Q ss_pred CccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCccccccc
Q psy18237 308 IDECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECIDMRR 352 (1050)
Q Consensus 308 ideC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~d~~~ 352 (1050)
||||+ .++.|.+ .|+|++|+|+|.|++||...+++++|....+
T Consensus 1 i~ec~-~~~~C~~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~ 43 (349)
T 3v64_C 1 VNECA-EEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALGP 43 (349)
T ss_dssp ---------CCSS-EECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred CcccC-CCCCCcC-eeecCCCCeEEECCCCccCCCCCCccccccc
Confidence 67887 4678986 9999999999999999999999999986543
No 118
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=93.84 E-value=0.026 Score=61.40 Aligned_cols=47 Identities=28% Similarity=0.810 Sum_probs=37.4
Q ss_pred ccccccCC-CCCCCCCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccC
Q psy18237 148 EIDECNLM-PNMCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECE 195 (1050)
Q Consensus 148 di~eC~~~-~~~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~ 195 (1050)
++|||... ...|+| .|+|+.|+|+|.|.+||++..++..|.+.++|.
T Consensus 1 ~~~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 1 AKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp --CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred CCCccCCCCCCCCCC-EeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 35677654 456764 699999999999999999998899999888874
No 119
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.52 E-value=0.037 Score=54.38 Aligned_cols=32 Identities=25% Similarity=0.675 Sum_probs=27.0
Q ss_pred CCCCCeeecCCCCeEeeCCCCCeeCCCCCCCcc
Q psy18237 158 MCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCID 190 (1050)
Q Consensus 158 ~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d 190 (1050)
.|. ..|+|.+|+|+|.|++||++..++.+|++
T Consensus 127 ~C~-~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 127 PCS-HFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CSS-SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred CCC-CcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 454 37999999999999999999888888874
No 120
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.12 E-value=0.041 Score=61.71 Aligned_cols=42 Identities=31% Similarity=0.794 Sum_probs=27.9
Q ss_pred CccccCCCCCCCCCeeecCCCceEEecCCCeEeCCCCCccccCc
Q psy18237 577 LDECRMMSYLCRNGRCRNNIGSFFCECLQGYTLASEGQYCRDVD 620 (1050)
Q Consensus 577 ideC~~~~~~C~ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~~~~ 620 (1050)
||||+ ....|.+ .|+|++|+|+|.|++||.+.++++.|..++
T Consensus 1 i~ec~-~~~~C~~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~ 42 (349)
T 3v64_C 1 VNECA-EEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALG 42 (349)
T ss_dssp ---------CCSS-EECCC---CCEECCTTEEECTTSSCEEESS
T ss_pred CcccC-CCCCCcC-eeecCCCCeEEECCCCccCCCCCCcccccc
Confidence 57887 4577875 899999999999999999999999998654
No 121
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=92.86 E-value=0.097 Score=49.06 Aligned_cols=26 Identities=23% Similarity=0.622 Sum_probs=22.1
Q ss_pred CCCCCCEEeecC--CCe-EEeCCCCcccC
Q psy18237 715 ICPSPGKCQNVM--GSF-ICTCPPGYRLS 740 (1050)
Q Consensus 715 ~C~~~g~C~~~~--gsy-~C~C~~Gy~g~ 740 (1050)
||.|+|+|++.. .+| +|.|++||+|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~ 30 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ 30 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEEST
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCc
Confidence 699999999874 555 99999999984
No 122
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=92.62 E-value=0.048 Score=43.80 Aligned_cols=28 Identities=18% Similarity=0.492 Sum_probs=23.2
Q ss_pred CCCCCCEEee----cCCCeEEeCCCCcccCCC
Q psy18237 715 ICPSPGKCQN----VMGSFICTCPPGYRLSPD 742 (1050)
Q Consensus 715 ~C~~~g~C~~----~~gsy~C~C~~Gy~g~~~ 742 (1050)
+|.|+|+|+. ..++|.|.|++||+|..+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~C 46 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRC 46 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSS
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCC
Confidence 8999999983 446799999999998543
No 123
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=92.53 E-value=0.052 Score=43.59 Aligned_cols=29 Identities=34% Similarity=0.910 Sum_probs=24.3
Q ss_pred CCCC-Ceee--c--CCCceEEecCCCeEeCCCCCcccc
Q psy18237 586 LCRN-GRCR--N--NIGSFFCECLQGYTLASEGQYCRD 618 (1050)
Q Consensus 586 ~C~n-g~C~--n--~~gsy~C~C~~Gy~~~~~G~~C~~ 618 (1050)
+|.| |+|+ + ..++|.|.|++||+ |.+|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEE----SSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCc----cCCCcc
Confidence 7887 5998 3 45689999999999 999984
No 124
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=91.47 E-value=0.14 Score=39.68 Aligned_cols=31 Identities=35% Similarity=0.783 Sum_probs=26.3
Q ss_pred CCCCCCCeee--cCCCceEEecCCCeEeCCCCCcccc
Q psy18237 584 SYLCRNGRCR--NNIGSFFCECLQGYTLASEGQYCRD 618 (1050)
Q Consensus 584 ~~~C~ng~C~--n~~gsy~C~C~~Gy~~~~~G~~C~~ 618 (1050)
.+.|.||+|. ...+.+.|+|++||+ |.+|+.
T Consensus 13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe~ 45 (50)
T 1iox_A 13 KHYCIKGRCRFVVAEQTPSCVCDEGYI----GARCER 45 (50)
T ss_dssp TTSCTTCCEEEETTTTEEEECCCTTEE----TTTTCE
T ss_pred cCcccCCEEEeEcCCCCeEEECCCCcc----cCCCCe
Confidence 3678899996 566789999999999 999983
No 125
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=91.38 E-value=0.11 Score=40.16 Aligned_cols=33 Identities=33% Similarity=0.754 Sum_probs=27.0
Q ss_pred CCCCCCCeeecC--CCceEEecCCCeEeCCCCCccccCc
Q psy18237 584 SYLCRNGRCRNN--IGSFFCECLQGYTLASEGQYCRDVD 620 (1050)
Q Consensus 584 ~~~C~ng~C~n~--~gsy~C~C~~Gy~~~~~G~~C~~~~ 620 (1050)
.+.|.||+|.-. .+.+.|.|++||+ |.+|+..+
T Consensus 13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe~~d 47 (50)
T 3e50_C 13 TQFCFHGTCRFLVQEDKPACVCHSGYV----GARCEHAD 47 (50)
T ss_pred cCcccCCEEeeccCCCCeEEECCCCCc----ccCCCcee
Confidence 477899999853 4779999999999 99998543
No 126
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=90.90 E-value=0.18 Score=38.99 Aligned_cols=37 Identities=27% Similarity=0.854 Sum_probs=28.8
Q ss_pred CccccC-CCCCCCCCeee--cCCCceEEecCCCeEeCCCCCccc
Q psy18237 577 LDECRM-MSYLCRNGRCR--NNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 577 ideC~~-~~~~C~ng~C~--n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
.++|.. ..+.|.||+|. ...+.+.|.|+.||+ |.+|+
T Consensus 9 ~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 9 KNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYF----GERCG 48 (50)
T ss_dssp CCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred CcccCchhhCcCCCCEEEEecCCCCeeEECCCCcc----ccccc
Confidence 445542 23678899997 566789999999999 99987
No 127
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=90.22 E-value=0.12 Score=50.89 Aligned_cols=37 Identities=27% Similarity=0.758 Sum_probs=28.8
Q ss_pred CCCCC-CCeeecCCCCeEeeCCCCCeeCCCCCCCccCCccCC
Q psy18237 156 PNMCN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCIDINECEE 196 (1050)
Q Consensus 156 ~~~C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~d~~eC~~ 196 (1050)
+++|+ +++|++..++|.|.|.+||. |..|+.+.+|..
T Consensus 124 ~~~C~~~g~C~~~~~~~~c~C~~g~~----g~~C~~~~~c~~ 161 (164)
T 3cfw_A 124 PWSCSGHGECVEIINNYTCNCDVGYY----GPQCQFVQVDPR 161 (164)
T ss_dssp TTSSCSSEEEEEETTEEEEEECTTCB----SSSSCBC-----
T ss_pred CCcCCCCCeecccCCCceeeeCCCcc----cccccccccCcc
Confidence 46787 79999999999999999999 678999988854
No 128
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=90.18 E-value=0.16 Score=60.31 Aligned_cols=35 Identities=31% Similarity=1.032 Sum_probs=32.0
Q ss_pred CccccCCCCCCCC-Ceeec-CCCceEEecC-CCeEeCCCCCccc
Q psy18237 577 LDECRMMSYLCRN-GRCRN-NIGSFFCECL-QGYTLASEGQYCR 617 (1050)
Q Consensus 577 ideC~~~~~~C~n-g~C~n-~~gsy~C~C~-~Gy~~~~~G~~C~ 617 (1050)
+|+|.. +||+| |+|++ ..++|+|.|+ +||+ |..|+
T Consensus 2 ~d~C~~--~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 39 (553)
T 1q4g_A 2 VNPCCY--YPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT 39 (553)
T ss_dssp CCGGGG--CCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred CCcCCC--CCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence 578887 89997 69999 8999999999 9999 99998
No 129
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=89.60 E-value=0.15 Score=60.41 Aligned_cols=35 Identities=26% Similarity=0.868 Sum_probs=30.4
Q ss_pred cccccCCCCCCCC-Ceeec-CCCCeEeeCC-CCCeeCCCCCCCc
Q psy18237 149 IDECNLMPNMCNH-GTCMN-TPGSFHCQCN-RGFLYDSDTHQCI 189 (1050)
Q Consensus 149 i~eC~~~~~~C~~-~~C~~-~~g~y~C~C~-~Gy~~~~~g~~C~ 189 (1050)
+|+|. ++||+| |+|++ ..++|+|.|. +||+ |.+|+
T Consensus 2 ~d~C~--~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 39 (553)
T 1q4g_A 2 VNPCC--YYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT 39 (553)
T ss_dssp CCGGG--GCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred CCcCC--CCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence 57787 688885 89999 8899999999 9999 78887
No 130
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=89.58 E-value=0.14 Score=43.42 Aligned_cols=37 Identities=30% Similarity=0.802 Sum_probs=27.2
Q ss_pred CccccC-CCCCCCCCeee--cCCCceEEecCCCeEeCCCCCccc
Q psy18237 577 LDECRM-MSYLCRNGRCR--NNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 577 ideC~~-~~~~C~ng~C~--n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
.++|.. ..+.|.||+|+ ...+.|.|.|++||+ |.+|+
T Consensus 37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYt----G~RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYH----GERCH 76 (79)
T ss_dssp --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEE----STTCC
T ss_pred CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcc----ccccc
Confidence 455552 23789999995 444678999999999 99997
No 131
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=89.38 E-value=0.35 Score=45.20 Aligned_cols=35 Identities=29% Similarity=0.782 Sum_probs=25.8
Q ss_pred CC-CCCeEeecC--Cce-eeeCCCCCeeCCCCCcccccccCC-ccc
Q psy18237 982 AC-LYGNCTNTL--GSF-SCTCPPNYQLTPAGNACVVLEDIN-ECE 1022 (1050)
Q Consensus 982 ~C-~~g~C~~~~--g~y-~C~C~~Gy~~~~~g~~C~~~~did-eC~ 1022 (1050)
+| ++|+|++.. .+| +|.|++||+ |..|+ ++++ +|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce--~~~~~~C~ 41 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE--IDKSKTCY 41 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEE----STTSC--EESSCCSB
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCC----Ccccc--ccCcCCCc
Confidence 56 568999884 566 999999999 78895 3443 454
No 132
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=89.22 E-value=0.25 Score=38.17 Aligned_cols=33 Identities=27% Similarity=0.733 Sum_probs=25.5
Q ss_pred CCCCCCCeeecC--CCCeEeeCCCCCeeCCCCCCCccCC
Q psy18237 156 PNMCNHGTCMNT--PGSFHCQCNRGFLYDSDTHQCIDIN 192 (1050)
Q Consensus 156 ~~~C~~~~C~~~--~g~y~C~C~~Gy~~~~~g~~C~d~~ 192 (1050)
.+.|.||+|... .+.+.|.|++||+ |.+|+..+
T Consensus 13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe~~d 47 (50)
T 3e50_C 13 TQFCFHGTCRFLVQEDKPACVCHSGYV----GARCEHAD 47 (50)
T ss_pred cCcccCCEEeeccCCCCeEEECCCCCc----ccCCCcee
Confidence 467888899753 4679999999999 77887543
No 133
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=87.87 E-value=0.33 Score=37.57 Aligned_cols=30 Identities=23% Similarity=0.748 Sum_probs=24.5
Q ss_pred CCCCCCCeee--cCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 156 PNMCNHGTCM--NTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 156 ~~~C~~~~C~--~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
.+.|.||+|. ...+.+.|.|++||+ |..|+
T Consensus 13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe 44 (50)
T 1iox_A 13 KHYCIKGRCRFVVAEQTPSCVCDEGYI----GARCE 44 (50)
T ss_dssp TTSCTTCCEEEETTTTEEEECCCTTEE----TTTTC
T ss_pred cCcccCCEEEeEcCCCCeEEECCCCcc----cCCCC
Confidence 4678788995 556779999999999 77887
No 134
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=87.58 E-value=0.24 Score=58.80 Aligned_cols=35 Identities=31% Similarity=0.940 Sum_probs=29.0
Q ss_pred cccccCCCCCCCC-Ceeec-CCCCeEeeCC-CCCeeCCCCCCCc
Q psy18237 149 IDECNLMPNMCNH-GTCMN-TPGSFHCQCN-RGFLYDSDTHQCI 189 (1050)
Q Consensus 149 i~eC~~~~~~C~~-~~C~~-~~g~y~C~C~-~Gy~~~~~g~~C~ 189 (1050)
||+|. ++||+| |+|++ ..++|.|.|+ +||+ |.+|+
T Consensus 1 vd~C~--s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 38 (587)
T 3nt1_A 1 ANPCC--SNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT 38 (587)
T ss_dssp CCTTT--TCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred CCCCC--CCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCC
Confidence 46777 688885 79985 4589999999 9999 78888
No 135
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=87.41 E-value=0.27 Score=58.37 Aligned_cols=35 Identities=29% Similarity=0.905 Sum_probs=30.5
Q ss_pred CccccCCCCCCCC-Ceeec-CCCceEEecC-CCeEeCCCCCccc
Q psy18237 577 LDECRMMSYLCRN-GRCRN-NIGSFFCECL-QGYTLASEGQYCR 617 (1050)
Q Consensus 577 ideC~~~~~~C~n-g~C~n-~~gsy~C~C~-~Gy~~~~~G~~C~ 617 (1050)
+|+|.. +||+| |+|++ ..++|.|.|+ +||+ |..|+
T Consensus 1 vd~C~s--~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 38 (587)
T 3nt1_A 1 ANPCCS--NPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT 38 (587)
T ss_dssp CCTTTT--CCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred CCCCCC--CCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCC
Confidence 578887 89997 59996 5589999999 9999 99998
No 136
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=86.23 E-value=0.46 Score=36.70 Aligned_cols=29 Identities=28% Similarity=0.872 Sum_probs=23.6
Q ss_pred CCCCCCeee--cCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 157 NMCNHGTCM--NTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 157 ~~C~~~~C~--~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
+.|.||+|. ...+.+.|.|++||+ |..|+
T Consensus 18 ~yC~nG~C~~i~~~~~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 18 NFCIHGECKYIEHLEAVTCKCQQEYF----GERCG 48 (50)
T ss_dssp GTCSSSEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred CcCCCCEEEEecCCCCeeEECCCCcc----ccccc
Confidence 578888996 556789999999999 66676
No 137
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=85.67 E-value=0.54 Score=51.56 Aligned_cols=41 Identities=24% Similarity=0.758 Sum_probs=33.0
Q ss_pred cCccCcCC---CCCCCCCeEeecC------CceEEeCCCCCeeCCCCCccc
Q psy18237 307 DIDECATS---IQRCGEGFCVNDV------GTYHCVCPDGYMLLPSGKECI 348 (1050)
Q Consensus 307 dideC~~~---~~~C~~~~C~n~~------Gsy~C~C~~G~~g~~~~~~C~ 348 (1050)
.+|+|..+ ++.|.+ .|++++ ++|+|.|+.||+...++++|.
T Consensus 266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 45677765 557874 899875 689999999999988888885
No 138
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=84.82 E-value=0.5 Score=57.28 Aligned_cols=43 Identities=30% Similarity=0.725 Sum_probs=37.1
Q ss_pred cCccCcCCCCCCCCCeEeecC-CceEEeCCCCCeeCCCCCccccc
Q psy18237 307 DIDECATSIQRCGEGFCVNDV-GTYHCVCPDGYMLLPSGKECIDM 350 (1050)
Q Consensus 307 dideC~~~~~~C~~~~C~n~~-Gsy~C~C~~G~~g~~~~~~C~d~ 350 (1050)
.+|||+.+++.|.+ .|++.+ |+|+|.|++||.+.+++++|.+.
T Consensus 264 ~~n~C~~~ng~C~~-~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 264 GWNECASSNGHCSH-LCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp CCCTTTTTGGGCSS-EEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred cceEeccCCCCcch-hhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 57888876678875 999998 99999999999999999999764
No 139
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=84.47 E-value=0.46 Score=46.64 Aligned_cols=41 Identities=22% Similarity=0.382 Sum_probs=31.2
Q ss_pred cccccCCCccccCCCceeeCCCCCcccccccceeEeeCCCCccCCCCCCCCCCCCCCccccchhc
Q psy18237 447 KKNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQTCEDINECL 511 (1050)
Q Consensus 447 ~eC~~~~~C~~~~~~g~C~~~~g~~~~~~~~~~~C~C~~Gy~g~~~~~~c~~~~~~~C~~~~eC~ 511 (1050)
..|.. .+|. ++|+|.+..+ +|.|.|++||.| ..|+.+.+|.
T Consensus 120 ~~~~~-~~C~---~~g~C~~~~~--------~~~c~C~~g~~g------------~~C~~~~~c~ 160 (164)
T 3cfw_A 120 ASCQP-WSCS---GHGECVEIIN--------NYTCNCDVGYYG------------PQCQFVQVDP 160 (164)
T ss_dssp CCCCT-TSSC---SSEEEEEETT--------EEEEEECTTCBS------------SSSCBC----
T ss_pred CCCCC-CcCC---CCCeecccCC--------CceeeeCCCccc------------ccccccccCc
Confidence 34555 7788 8999999888 999999999999 6788777774
No 140
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=84.28 E-value=0.44 Score=40.46 Aligned_cols=39 Identities=26% Similarity=0.689 Sum_probs=26.5
Q ss_pred cccccccC-CCCCCCCCeee--cCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 147 EEIDECNL-MPNMCNHGTCM--NTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 147 ~di~eC~~-~~~~C~~~~C~--~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
...++|.. ..+.|.||+|+ ...+.|.|.|.+||+ |..|+
T Consensus 35 ~~~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYt----G~RCE 76 (79)
T 1xdt_R 35 KKRDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYH----GERCH 76 (79)
T ss_dssp ----CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEE----STTCC
T ss_pred ccCCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcc----ccccc
Confidence 34566762 34688888994 334678999999999 66776
No 141
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=83.43 E-value=0.7 Score=50.82 Aligned_cols=42 Identities=33% Similarity=0.788 Sum_probs=34.1
Q ss_pred CccCcCCCCCCCCCeEeecCC--ceEEeCCCCCeeCCCCCccccc
Q psy18237 308 IDECATSIQRCGEGFCVNDVG--TYHCVCPDGYMLLPSGKECIDM 350 (1050)
Q Consensus 308 ideC~~~~~~C~~~~C~n~~G--sy~C~C~~G~~g~~~~~~C~d~ 350 (1050)
.|+|+.+++.|.+ .|...++ +|+|.|+.||+...++++|.|-
T Consensus 267 ~n~C~~~ng~Cs~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~ 310 (318)
T 3sov_A 267 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310 (318)
T ss_dssp CCTTTTTGGGCSS-EEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred ccccccCCCCcce-EEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence 4677665667875 8998876 7999999999999999999864
No 142
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=79.34 E-value=1.2 Score=48.70 Aligned_cols=41 Identities=24% Similarity=0.498 Sum_probs=32.6
Q ss_pred cCccccCC---CCCCCCCeeecCC------CceEEecCCCeEeCCCCCccc
Q psy18237 576 DLDECRMM---SYLCRNGRCRNNI------GSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 576 dideC~~~---~~~C~ng~C~n~~------gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
..++|... ...|++ .|.+.+ ++|+|.|+.||++.+++++|+
T Consensus 266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 45777764 446764 898775 689999999999999999986
No 143
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=79.01 E-value=2.1 Score=47.90 Aligned_cols=15 Identities=13% Similarity=0.217 Sum_probs=12.3
Q ss_pred ceeEeeCCCCccCCC
Q psy18237 478 RMDCCCTMGMAWGPQ 492 (1050)
Q Consensus 478 ~~~C~C~~Gy~g~~~ 492 (1050)
.+.|.|++||+|..+
T Consensus 271 ~~~C~C~~nt~G~~C 285 (375)
T 4aqt_A 271 KLMCNCKHNTYGVDC 285 (375)
T ss_dssp CEEECCCTTEESTTS
T ss_pred CeeeeCcCCCcCCCc
Confidence 678999999999544
No 144
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=78.79 E-value=0.59 Score=45.37 Aligned_cols=30 Identities=33% Similarity=0.974 Sum_probs=26.1
Q ss_pred CCCCC-CCeeecCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 156 PNMCN-HGTCMNTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 156 ~~~C~-~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
.++|. +++|.+..++|.|.|.+||+ |..|+
T Consensus 124 ~~pc~~~g~C~~~~~~~~c~C~~g~~----g~~Ce 154 (157)
T 1g1t_A 124 NTSCSGHGECVETINNYTCKCDPGFS----GLKCE 154 (157)
T ss_dssp TTGGGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred CCCCCCCCEeecCCCCeeEECCCCcc----Ccccc
Confidence 46777 58999999999999999999 66787
No 145
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=78.65 E-value=1 Score=54.37 Aligned_cols=41 Identities=29% Similarity=0.741 Sum_probs=35.8
Q ss_pred cCccCcCCCCCCCCCeEeecCCceEEeCCCCCeeCCCCCccc
Q psy18237 307 DIDECATSIQRCGEGFCVNDVGTYHCVCPDGYMLLPSGKECI 348 (1050)
Q Consensus 307 dideC~~~~~~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~ 348 (1050)
..|+|+.+++.|.+ .|++++++|+|.|+.||....++++|.
T Consensus 577 ~~~~C~~~ng~C~~-~C~~~~~~~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 577 GSNPCAEENGGCSH-LCLYRPQGLRCACPIGFELISDMKTCI 617 (619)
T ss_dssp CCCGGGSGGGGCSS-EEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred ccccCCCCCCChhH-hhccCCCCeEEECCCCCEECCCCCcCC
Confidence 46889876778985 999999999999999999988888875
No 146
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=76.12 E-value=1.1 Score=54.20 Aligned_cols=46 Identities=28% Similarity=0.612 Sum_probs=36.8
Q ss_pred ccccccCCCCCCCCCceecCC-CCeEEEcCCCCccCCCCCCCcCCCccc
Q psy18237 233 YINECEEMPEICGSGTCENNI-GSFSCRCEDGYSVKPAEGPACTDENEC 280 (1050)
Q Consensus 233 ~~~eC~~~~~~C~~~~C~~~~-g~y~C~C~~Gy~g~~~~~~~C~~ideC 280 (1050)
.++||+.+.+.|++ .|.+++ ++|+|.|++||.+. .++++|....+.
T Consensus 264 ~~n~C~~~ng~C~~-~C~~~~~~~~~C~C~~g~~l~-~d~~~C~~~~~~ 310 (628)
T 4a0p_A 264 GWNECASSNGHCSH-LCLAVPVGGFVCGCPAHYSLN-ADNRTCSAPTTF 310 (628)
T ss_dssp CCCTTTTTGGGCSS-EEEEETTTEEEEECSTTCEEC-TTSSCEECCSSE
T ss_pred cceEeccCCCCcch-hhhcCCCCCeeEEcCCCcEec-ccCCcCccccce
Confidence 57899887778876 899998 99999999999987 466677654443
No 147
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=73.59 E-value=2.7 Score=40.35 Aligned_cols=27 Identities=22% Similarity=0.612 Sum_probs=22.0
Q ss_pred CCCCCCCEEeec--CCCe-EEeCCCCcccC
Q psy18237 714 GICPSPGKCQNV--MGSF-ICTCPPGYRLS 740 (1050)
Q Consensus 714 ~~C~~~g~C~~~--~gsy-~C~C~~Gy~g~ 740 (1050)
.+|+|+|+|+.. ...| .|.|++||.|.
T Consensus 13 cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~ 42 (145)
T 2i9a_A 13 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQ 42 (145)
T ss_dssp CCCCTTCEEEECSSSTTCEEEECCTTEEST
T ss_pred CCCCCCCCcCCCccccCCccccCCCCCCCC
Confidence 479999999876 2455 89999999984
No 148
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=73.11 E-value=3 Score=40.06 Aligned_cols=56 Identities=23% Similarity=0.559 Sum_probs=33.9
Q ss_pred CC-CCCeEeec--CCce-eeeCCCCCeeCCCCCcccccccCC-cccCCCCCCCCCeEEecCCCeEee
Q psy18237 982 AC-LYGNCTNT--LGSF-SCTCPPNYQLTPAGNACVVLEDIN-ECEEHDNICENGHCTNTFGSFMCS 1043 (1050)
Q Consensus 982 ~C-~~g~C~~~--~g~y-~C~C~~Gy~~~~~g~~C~~~~did-eC~~~~~~C~~g~C~n~~gsy~C~ 1043 (1050)
+| ++|+|+.. ...| +|.|++||. |..|+ ++++ +|......--.|+...+..+..|+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~----G~~Ce--i~~~~~C~~g~G~~YrG~~s~T~sG~~Cq 74 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE--IDKSKTCYEGNGHFYRGKASTDTMGRPCL 74 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEE----STTSC--EESSCCEECTTCTTCCSCCCBBTTSCBCC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCC----CCcee--ccccccCCCCCccccccceecCCcCCccc
Confidence 67 66899876 3566 899999999 78895 3443 454332221134444444555554
No 149
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=72.87 E-value=1.3 Score=42.92 Aligned_cols=34 Identities=29% Similarity=0.896 Sum_probs=28.8
Q ss_pred ccccCCCCCCC-CCeeecCCCceEEecCCCeEeCCCCCccc
Q psy18237 578 DECRMMSYLCR-NGRCRNNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 578 deC~~~~~~C~-ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
++|.. .+|. +|.|.+..++|.|.|.+||+ |.+|+
T Consensus 120 ~~~~~--~pc~~~g~C~~~~~~~~c~C~~g~~----g~~Ce 154 (157)
T 1g1t_A 120 AACTN--TSCSGHGECVETINNYTCKCDPGFS----GLKCE 154 (157)
T ss_dssp CCCCT--TGGGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred CCCCC--CCCCCCCEeecCCCCeeEECCCCcc----Ccccc
Confidence 44544 6787 47999999999999999999 99997
No 150
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=72.17 E-value=2.4 Score=46.46 Aligned_cols=37 Identities=27% Similarity=0.696 Sum_probs=30.0
Q ss_pred CCCC-CCCCCCCCeEeecCC--ceeeeCCCCCeeCCCCCcc
Q psy18237 975 NECE-SPQACLYGNCTNTLG--SFSCTCPPNYQLTPAGNAC 1012 (1050)
Q Consensus 975 ~eC~-~~~~C~~g~C~~~~g--~y~C~C~~Gy~~~~~g~~C 1012 (1050)
++|. .+..|.+ .|...++ +|+|.|+.||++..++++|
T Consensus 268 n~C~~~ng~Cs~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c 307 (318)
T 3sov_A 268 NPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTC 307 (318)
T ss_dssp CTTTTTGGGCSS-EEEECSSTTSEEEECSTTCCBCTTSSCB
T ss_pred cccccCCCCcce-EEecCCCCCCeEEECCCCCEECCCCCCC
Confidence 5554 3456766 7998865 7999999999999999999
No 151
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=69.28 E-value=6.6 Score=43.92 Aligned_cols=20 Identities=25% Similarity=0.722 Sum_probs=16.8
Q ss_pred cCCCceEEecCCCeEeCCCCCccc
Q psy18237 594 NNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 594 n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
+..+.+.|.|++||+ |..|+
T Consensus 267 ~~~~~~~C~C~~nt~----G~~Ce 286 (375)
T 4aqt_A 267 NEFDKLMCNCKHNTY----GVDCE 286 (375)
T ss_dssp CTTSCEEECCCTTEE----STTSC
T ss_pred CCCCCeeeeCcCCCc----CCCcc
Confidence 445678899999999 99997
No 152
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=68.23 E-value=2.4 Score=51.15 Aligned_cols=40 Identities=23% Similarity=0.474 Sum_probs=33.9
Q ss_pred CccccCCCCCCCCCeeecCCCceEEecCCCeEeCCCCCccc
Q psy18237 577 LDECRMMSYLCRNGRCRNNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 577 ideC~~~~~~C~ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
.++|......|.+ .|.+.+++|+|.|+.||.+.+++++|.
T Consensus 578 ~~~C~~~ng~C~~-~C~~~~~~~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 578 SNPCAEENGGCSH-LCLYRPQGLRCACPIGFELISDMKTCI 617 (619)
T ss_dssp CCGGGSGGGGCSS-EEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred cccCCCCCCChhH-hhccCCCCeEEECCCCCEECCCCCcCC
Confidence 5777765556753 899999999999999999999999986
No 153
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=67.18 E-value=6.3 Score=44.37 Aligned_cols=68 Identities=22% Similarity=0.515 Sum_probs=43.9
Q ss_pred cceeecCCCCccCCCCCCCCCCCCCCCccccCCCCCCCCC----------CCCCCCCCCCCC-EEee-------------
Q psy18237 669 RSTCCCSIGKAWGPQCEECPAVGSDEHKTLCPGGSGYRPN----------SATREGICPSPG-KCQN------------- 724 (1050)
Q Consensus 669 ~~~C~C~~G~~~G~~C~~c~~~~~~~~~~~Cp~g~g~~~~----------~~~~~~~C~~~g-~C~~------------- 724 (1050)
..+|.|..++ .|.+||.|. +||+++ ..+.+..|..++ .|.-
T Consensus 285 ~g~C~C~hnT-~G~~CErC~--------------pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~ 349 (403)
T 2y38_A 285 RLQCACQHNT-CGGSCDRCC--------------PGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQ 349 (403)
T ss_dssp CEEECCCTTE-ESSSCCEEC--------------TTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCT
T ss_pred ceEeECcCcC-cCCCCCCCC--------------ccccCCcccccccCCCccccccccCCCCcccccCcccccccccccc
Confidence 3568888887 799999765 334332 134566676665 4741
Q ss_pred ---cCCCeEEe-CCCCcccCCCCCcccccccccCCCCCCC
Q psy18237 725 ---VMGSFICT-CPPGYRLSPDKNSCQEDFAKLCPEGVGR 760 (1050)
Q Consensus 725 ---~~gsy~C~-C~~Gy~g~~~~~~C~~~~~c~C~~g~~~ 760 (1050)
..++.+|. |..++.|..+ + .|.+||++
T Consensus 350 ~~~~~~~G~C~~C~~nt~G~~C----E-----rC~~GYyg 380 (403)
T 2y38_A 350 DNVYQGGGVCLDCQHHTTGINC----E-----RCLPGFFR 380 (403)
T ss_dssp TSCSCCCEEESSCCSSEESTTS----C-----EECTTCEE
T ss_pred cccCCCCCCCCCCcCcCcCCCC----C-----cCCCCccC
Confidence 13567896 9999998543 3 45577766
No 154
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=61.61 E-value=4.7 Score=40.05 Aligned_cols=26 Identities=35% Similarity=0.839 Sum_probs=20.8
Q ss_pred CCCCCCCCEEeecCCCeEEeCCCCcccCC
Q psy18237 713 EGICPSPGKCQNVMGSFICTCPPGYRLSP 741 (1050)
Q Consensus 713 ~~~C~~~g~C~~~~gsy~C~C~~Gy~g~~ 741 (1050)
..+|.|+|.|+. -.+|.|++||.|..
T Consensus 152 ~~~C~ngG~Cv~---P~~C~C~~Gw~G~~ 177 (188)
T 2ygo_A 152 PGGCRNGGFCNE---RRICECPDGFHGPH 177 (188)
T ss_dssp TTCCCTTCEECT---TSCEECCTTCBTTT
T ss_pred CCCCCCCCEeCC---CCcccCcCCCCCCC
Confidence 357999999985 23699999999854
No 155
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=61.48 E-value=8.8 Score=44.43 Aligned_cols=40 Identities=28% Similarity=0.550 Sum_probs=31.4
Q ss_pred ccccccCC-CCCCC-CCeeecC-CCCeEeeCCCCCeeCCCCCCCc
Q psy18237 148 EIDECNLM-PNMCN-HGTCMNT-PGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 148 di~eC~~~-~~~C~-~~~C~~~-~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
.++.|... .++|+ ||.|+.+ .|+|.|.|+.||.|+ |..|.
T Consensus 17 ~~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~--G~~c~ 59 (551)
T 3fby_A 17 AQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGN--GILCG 59 (551)
T ss_dssp BCCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESS--SSSCE
T ss_pred ccccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCC--CcccC
Confidence 45556543 47998 8999877 578999999999987 67786
No 156
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=61.40 E-value=11 Score=32.58 Aligned_cols=60 Identities=17% Similarity=0.434 Sum_probs=47.7
Q ss_pred CCeEEeCC-CCeeeeCCCCceeCCCCCccccCC--ccCCCCCCC-CCCeEecCC-CceEEecCCCCc
Q psy18237 779 GGECINTD-GSYRCECPAGYVKDETGKICIDDN--ECLSIPNIC-GNGTCTNLN-GGFECTCSEGYA 840 (1050)
Q Consensus 779 ~g~C~~~~-gsy~C~C~~Gy~~~~~g~~C~~~~--~C~~~~~~C-~~g~C~~~~-g~~~C~C~~Gy~ 840 (1050)
|+.|.... +.-.|+|..+|..+ +..|+..+ .|+.....| .+|.|.... ..-.|.|...+.
T Consensus 15 NA~Cyr~~dg~EecRCllnykk~--~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 15 NAACYRYLDGTEEWRCLLYFKED--AGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp TEEEEECTTSCEEEEECTTEEEE--TTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred CcCeEEEcCCCEEEEEECCeEec--CCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence 66898864 67899999999876 77896443 788777788 889998776 678899988754
No 157
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=61.35 E-value=19 Score=40.50 Aligned_cols=28 Identities=14% Similarity=0.394 Sum_probs=17.7
Q ss_pred CCCCCCE-EeecC--C--CeEEeCCCCcccCCC
Q psy18237 715 ICPSPGK-CQNVM--G--SFICTCPPGYRLSPD 742 (1050)
Q Consensus 715 ~C~~~g~-C~~~~--g--sy~C~C~~Gy~g~~~ 742 (1050)
.|..|+. |.... + ..+|.|..++.|..+
T Consensus 267 ~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~C 299 (403)
T 2y38_A 267 VCHGHADVCDAKDPLDPFRLQCACQHNTCGGSC 299 (403)
T ss_dssp CCTTBCSCEEESCTTSTTCEEECCCTTEESSSC
T ss_pred ccCCCccccCCCCCCCccceEeECcCcCcCCCC
Confidence 3665654 86432 1 246999999998644
No 158
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=61.23 E-value=4.8 Score=40.03 Aligned_cols=24 Identities=29% Similarity=0.498 Sum_probs=20.6
Q ss_pred CCccccCCCceeeCCCCCcccccccceeEeeCCCCccC
Q psy18237 453 GFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWG 490 (1050)
Q Consensus 453 ~~C~~~~~~g~C~~~~g~~~~~~~~~~~C~C~~Gy~g~ 490 (1050)
.+|. |+|.|+. ++ +|.|++||+|.
T Consensus 153 ~~C~---ngG~Cv~-P~----------~C~C~~Gw~G~ 176 (188)
T 2ygo_A 153 GGCR---NGGFCNE-RR----------ICECPDGFHGP 176 (188)
T ss_dssp TCCC---TTCEECT-TS----------CEECCTTCBTT
T ss_pred CCCC---CCCEeCC-CC----------cccCcCCCCCC
Confidence 5788 9999997 45 79999999994
No 159
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=59.72 E-value=5.9 Score=44.96 Aligned_cols=36 Identities=31% Similarity=0.830 Sum_probs=31.2
Q ss_pred CccccCCCCCCCC-CeeecCCCceEEecCC-CeEeCCCCCcccc
Q psy18237 577 LDECRMMSYLCRN-GRCRNNIGSFFCECLQ-GYTLASEGQYCRD 618 (1050)
Q Consensus 577 ideC~~~~~~C~n-g~C~n~~gsy~C~C~~-Gy~~~~~G~~C~~ 618 (1050)
.++|.. .+|.| |+|++..++|.|.|+. ||+ |..|+.
T Consensus 185 ~~~C~~--~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~ 222 (410)
T 3asi_A 185 STTCQE--DSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCND 222 (410)
T ss_dssp SSCCCT--TSSSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred CCCccc--ccCCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence 467876 88996 6999999999999996 999 999983
No 160
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=55.89 E-value=22 Score=30.90 Aligned_cols=64 Identities=17% Similarity=0.426 Sum_probs=49.3
Q ss_pred CC-CCCeEeecC-CceeeeCCCCCeeCCCCCcccccccCCcccCCCCCCC-CCeEEecC-CCeEeecCCCC
Q psy18237 982 AC-LYGNCTNTL-GSFSCTCPPNYQLTPAGNACVVLEDINECEEHDNICE-NGHCTNTF-GSFMCSCQDGF 1048 (1050)
Q Consensus 982 ~C-~~g~C~~~~-g~y~C~C~~Gy~~~~~g~~C~~~~dideC~~~~~~C~-~g~C~n~~-gsy~C~C~~Gy 1048 (1050)
.| .++.|.... +.-.|.|..||.-+ +..|+. .....|+.+..-|. +|.|.... .--.|.|...+
T Consensus 11 kcp~NA~Cyr~~dg~EecRCllnykk~--~~kCV~-~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 11 NVPENAACYRYLDGTEEWRCLLYFKED--AGKCVP-APNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEEE--TTEEEE-CTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred CCCCCcCeEEEcCCCEEEEEECCeEec--CCEEEc-CCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 45 567898864 67899999999975 677953 22336888778899 99999888 67899998775
No 161
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=53.16 E-value=7.9 Score=43.88 Aligned_cols=36 Identities=28% Similarity=0.797 Sum_probs=30.3
Q ss_pred cccccCCCCCCC-CCeeecCCCCeEeeCCC-CCeeCCCCCCCcc
Q psy18237 149 IDECNLMPNMCN-HGTCMNTPGSFHCQCNR-GFLYDSDTHQCID 190 (1050)
Q Consensus 149 i~eC~~~~~~C~-~~~C~~~~g~y~C~C~~-Gy~~~~~g~~C~d 190 (1050)
.++|. .++|+ +|+|++..++|.|.|+. ||. |..|++
T Consensus 185 ~~~C~--~~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~ 222 (410)
T 3asi_A 185 STTCQ--EDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCND 222 (410)
T ss_dssp SSCCC--TTSSSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred CCCcc--cccCCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence 46777 68998 48999999999999996 998 778873
No 162
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=48.71 E-value=11 Score=43.64 Aligned_cols=31 Identities=35% Similarity=0.721 Sum_probs=25.9
Q ss_pred CCCCC-CeEeec-CCceEEeCCCCCeeCCCCCccc
Q psy18237 316 QRCGE-GFCVND-VGTYHCVCPDGYMLLPSGKECI 348 (1050)
Q Consensus 316 ~~C~~-~~C~n~-~Gsy~C~C~~G~~g~~~~~~C~ 348 (1050)
++|+. |.|+.+ .|+|.|.|+.||.| .|..|.
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag--~G~~c~ 59 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAG--NGILCG 59 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEES--SSSSCE
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCC--CCcccC
Confidence 57877 999887 67899999999999 666665
No 163
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=40.97 E-value=20 Score=37.95 Aligned_cols=31 Identities=35% Similarity=0.966 Sum_probs=25.6
Q ss_pred CCCCCeEeecCCceEEeCCCCCeeCCCCCccc
Q psy18237 317 RCGEGFCVNDVGTYHCVCPDGYMLLPSGKECI 348 (1050)
Q Consensus 317 ~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~ 348 (1050)
.|.+ .|.|..|+|.|.|.+||.+..+...|.
T Consensus 133 ~c~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 133 SCDH-YCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CCSS-EEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred cCCc-CcCCccCCcEEEeCCcceeccCCCCCc
Confidence 5653 699999999999999999977766654
No 164
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=37.98 E-value=21 Score=38.17 Aligned_cols=31 Identities=32% Similarity=0.867 Sum_probs=25.7
Q ss_pred CCCCCeEeecCCceEEeCCCCCeeCCCCCccc
Q psy18237 317 RCGEGFCVNDVGTYHCVCPDGYMLLPSGKECI 348 (1050)
Q Consensus 317 ~C~~~~C~n~~Gsy~C~C~~G~~g~~~~~~C~ 348 (1050)
.|. ..|.|..|+|.|.|.+||.+..++..|.
T Consensus 132 ~c~-~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 132 PCD-HYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp CCS-SEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCC-CccccccCceEeecCCCceeccCCCCcc
Confidence 355 4899999999999999999987766664
No 165
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=31.66 E-value=28 Score=45.56 Aligned_cols=35 Identities=34% Similarity=0.981 Sum_probs=31.1
Q ss_pred CccccCCCCCCCC-CeeecCCCceEEecC-CCeEeCCCCCccc
Q psy18237 577 LDECRMMSYLCRN-GRCRNNIGSFFCECL-QGYTLASEGQYCR 617 (1050)
Q Consensus 577 ideC~~~~~~C~n-g~C~n~~gsy~C~C~-~Gy~~~~~G~~C~ 617 (1050)
.+.|.. ++|.| |+|.+...+|.|.|+ .||. |..|+
T Consensus 619 ~~~C~~--~pC~ngg~C~~~~~~~~C~C~~~g~~----G~~C~ 655 (1245)
T 3qcw_A 619 AKPCLS--NPCKNNGMCRDGWNRYVCDCSGTGYL----GRSCE 655 (1245)
T ss_dssp SCGGGS--CCCCTTCEEEECSSSEEEECTTTTEE----STTSC
T ss_pred CCCCCc--cCCCCCCEEeCCCCCeEEECCCCCcc----cccCc
Confidence 578876 89996 699999999999999 7999 99997
No 166
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=30.10 E-value=24 Score=37.40 Aligned_cols=31 Identities=32% Similarity=0.939 Sum_probs=24.7
Q ss_pred CCCCCeeecCCCCeEeeCCCCCeeCCCCCCCc
Q psy18237 158 MCNHGTCMNTPGSFHCQCNRGFLYDSDTHQCI 189 (1050)
Q Consensus 158 ~C~~~~C~~~~g~y~C~C~~Gy~~~~~g~~C~ 189 (1050)
.|.+ .|.|..|+|+|.|.+||.+..+...|.
T Consensus 133 ~c~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 133 SCDH-YCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CCSS-EEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred cCCc-CcCCccCCcEEEeCCcceeccCCCCCc
Confidence 4553 599999999999999999876665554
No 167
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=28.23 E-value=31 Score=45.04 Aligned_cols=35 Identities=29% Similarity=0.828 Sum_probs=30.4
Q ss_pred cccccCCCCCCC-CCeeecCCCCeEeeCC-CCCeeCCCCCCCc
Q psy18237 149 IDECNLMPNMCN-HGTCMNTPGSFHCQCN-RGFLYDSDTHQCI 189 (1050)
Q Consensus 149 i~eC~~~~~~C~-~~~C~~~~g~y~C~C~-~Gy~~~~~g~~C~ 189 (1050)
.+.|. ++||+ +|+|++..++|.|.|+ +||. |.+|+
T Consensus 619 ~~~C~--~~pC~ngg~C~~~~~~~~C~C~~~g~~----G~~C~ 655 (1245)
T 3qcw_A 619 AKPCL--SNPCKNNGMCRDGWNRYVCDCSGTGYL----GRSCE 655 (1245)
T ss_dssp SCGGG--SCCCCTTCEEEECSSSEEEECTTTTEE----STTSC
T ss_pred CCCCC--ccCCCCCCEEeCCCCCeEEECCCCCcc----cccCc
Confidence 46787 78998 4899999999999999 7999 77887
No 168
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=25.44 E-value=25 Score=42.34 Aligned_cols=44 Identities=23% Similarity=0.580 Sum_probs=32.9
Q ss_pred cccCCCCcccccccccccCCcccCccccCCCCCCC-CCeeecCCCceEEecCCCeEeCCCCCccc
Q psy18237 554 CALTPVLTRKVATPVAVINDCIDLDECRMMSYLCR-NGRCRNNIGSFFCECLQGYTLASEGQYCR 617 (1050)
Q Consensus 554 C~C~~G~~G~~C~~~~~~~~C~dideC~~~~~~C~-ng~C~n~~gsy~C~C~~Gy~~~~~G~~C~ 617 (1050)
-.|.+||+|++|.. +..|. ..|. ||.|++. +|.|.+||+ |..|.
T Consensus 520 ~~C~~gw~g~dc~i---~~~Cp---------~~C~ghG~C~~G----~C~Cd~G~~----G~~C~ 564 (725)
T 2e26_A 520 FDKQQTWAIDNVYI---GDGCL---------DMCSGHGRCVQG----SCVCDEQWG----GLYCD 564 (725)
T ss_dssp CCTTCCEEEEEEEE---ESCSS---------GGGGGSEEEETT----EEEECTTEE----STTSC
T ss_pred CccCCCcccccccc---cCCCC---------cccCCCcEECCC----CEeeCCCcc----CCCcC
Confidence 36899999988861 12342 3455 7999985 599999999 88887
No 169
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=24.76 E-value=44 Score=35.59 Aligned_cols=55 Identities=25% Similarity=0.596 Sum_probs=35.6
Q ss_pred C-CCCeEeecCCceeeeCCCCCeeCCCCCcccccccC-------CcccC--CCCCCC-CCeEEecCCCeEeecCCCCc
Q psy18237 983 C-LYGNCTNTLGSFSCTCPPNYQLTPAGNACVVLEDI-------NECEE--HDNICE-NGHCTNTFGSFMCSCQDGFK 1049 (1050)
Q Consensus 983 C-~~g~C~~~~g~y~C~C~~Gy~~~~~g~~C~~~~di-------deC~~--~~~~C~-~g~C~n~~gsy~C~C~~Gy~ 1049 (1050)
| .+|+|.-. .|.|.+||+ |..|+...+. ..|.. ...+|. +|+|+-. .|+|..++.
T Consensus 198 C~g~G~~~CG----~C~C~~g~~----G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~ 263 (280)
T 2p26_A 198 CHGKGFLECG----ICRCDTGYI----GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDV 263 (280)
T ss_dssp GGGSEEEETT----EEEECTTEE----STTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSS
T ss_pred cCCCCeECCC----ceeCCCCCc----CCcceecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCC
Confidence 5 45666532 799999999 6667532222 15753 223698 8999865 799977763
No 170
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=24.26 E-value=40 Score=35.93 Aligned_cols=61 Identities=23% Similarity=0.347 Sum_probs=33.3
Q ss_pred ccccCCCCcccccccccccCCcc-cCccccC--CCCCCC-CCeeecCCCceEEecCCCeEeC--CCCCccc
Q psy18237 553 ACALTPVLTRKVATPVAVINDCI-DLDECRM--MSYLCR-NGRCRNNIGSFFCECLQGYTLA--SEGQYCR 617 (1050)
Q Consensus 553 ~C~C~~G~~G~~C~~~~~~~~C~-dideC~~--~~~~C~-ng~C~n~~gsy~C~C~~Gy~~~--~~G~~C~ 617 (1050)
.|.|.+||.|..|+=......=. ....|.. ....|. +|.|+-. +|.|..+|.+. -.|+.|+
T Consensus 208 ~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~~~~~~~G~~~~ 274 (280)
T 2p26_A 208 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCE 274 (280)
T ss_dssp EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSSTTCEEESTTSC
T ss_pred ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCCCCeeEeeEecc
Confidence 58888999998876111000000 0014642 123576 5888764 59998875322 1277776
No 171
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=21.34 E-value=42 Score=40.39 Aligned_cols=41 Identities=20% Similarity=0.243 Sum_probs=28.8
Q ss_pred CCCCCCcCcccccc-cCCC---CCCcccCCCCCCceeecCCCcccCCCCCC
Q psy18237 67 TAWLPTFTNVTTLT-NVTS---TNEYVTGDNVITRWCVCDEGFRGDGYSCE 113 (1050)
Q Consensus 67 ~~c~~g~~g~~c~~-~~~~---~n~~~c~~~~g~~~C~C~~G~~g~~~~C~ 113 (1050)
..|.+||.|.+|+. ..|. ...+.|.+ .+|.|.+||+|. .|.
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~----G~C~Cd~G~~G~--~C~ 564 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQ----GSCVCDEQWGGL--YCD 564 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGGGSEEEET----TEEEECTTEEST--TSC
T ss_pred CccCCCcccccccccCCCCcccCCCcEECC----CCEeeCCCccCC--CcC
Confidence 36899999999994 3232 23334443 369999999997 675
No 172
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=20.74 E-value=52 Score=22.65 Aligned_cols=22 Identities=32% Similarity=0.922 Sum_probs=16.6
Q ss_pred EecCCCeEeCCCCCccccCcccc
Q psy18237 601 CECLQGYTLASEGQYCRDVDECK 623 (1050)
Q Consensus 601 C~C~~Gy~~~~~G~~C~~~~eC~ 623 (1050)
|.|++||..+..| .|...++|.
T Consensus 7 C~C~~G~vrn~~G-~CV~~~~Cp 28 (32)
T 3ssb_I 7 CYCEDGYARDVNG-KCIPIKDCP 28 (32)
T ss_dssp EEECTTEEECTTS-CEEEGGGCC
T ss_pred CCcCCCcEECCCC-CEECHHHCc
Confidence 9999999987654 587666653
Done!