RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy18241
(566 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 154 bits (391), Expect = 5e-44
Identities = 66/184 (35%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Query: 378 KKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSF 437
+ + + G P+ C C KSF++ L +H HTG ++C CGK F +K
Sbjct: 6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65
Query: 438 YIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAH 497
H+ H+GEKP KC CG + ++L+ H R HTGEKPY C CGK + + L AH
Sbjct: 66 TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQL-AHLRAH 124
Query: 498 IQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIH 557
+TH+ +P+ C CG+ + + L H H+G P+ C C KSF+++ L H H
Sbjct: 125 QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184
Query: 558 NGTK 561
G K
Sbjct: 185 TGKK 188
Score = 142 bits (362), Expect = 6e-40
Identities = 66/181 (36%), Positives = 92/181 (50%), Gaps = 1/181 (0%)
Query: 351 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 410
S A +P+ C CG+ + L H H G P+ C C KSF+ K L
Sbjct: 7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLT 66
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFR 470
+H HTG ++C CGK F + + H+ H+GEKP C CG + +HL+ H R
Sbjct: 67 RHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR 126
Query: 471 VHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHS 530
HTGEKPY+C CGK R L+ H +TH+ +P+ C CG+ + + AL VH H+
Sbjct: 127 THTGEKPYKCPECGKSFSRE-DNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHT 185
Query: 531 G 531
G
Sbjct: 186 G 186
Score = 142 bits (361), Expect = 6e-40
Identities = 69/210 (32%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 292 KKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVS 351
+ + + G P+ C C KSF++ L +H HTG
Sbjct: 6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGE------------------ 47
Query: 352 ELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQK 411
+P+ C CG+ + KK L H H G P+ C C KSF+Q+ L+
Sbjct: 48 ------------KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRA 95
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRV 471
H HTG + C CGK F H+ H+GEKP KC CG + +L H R
Sbjct: 96 HQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT 155
Query: 472 HTGEKPYQCTTCGKRLRRTVSELNAHIQTH 501
HTGEKPY+C CGK R LN H +TH
Sbjct: 156 HTGEKPYKCPECGKSFSRR-DALNVHQRTH 184
Score = 141 bits (357), Expect = 3e-39
Identities = 57/163 (34%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 402 SFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLS 461
S + G + C CGK F H+ H+GEKP KC CG +
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 462 SSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKA 521
L RH R HTGEKPY+C CGK + + L AH +TH+ +P+ C CG+ +
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQR-ANLRAHQRTHTGEKPYACPECGKSFSQLAH 120
Query: 522 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
L H H+G P+ C C KSF+++ L H H G K Y+
Sbjct: 121 LRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYK 163
Score = 140 bits (355), Expect = 5e-39
Identities = 64/213 (30%), Positives = 88/213 (41%), Gaps = 30/213 (14%)
Query: 265 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 324
S A +P+ C CG+ + L H H G P+ C C KSF+ K L
Sbjct: 7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLT 66
Query: 325 KHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVH 384
+H HTG +P+ C CG+ + + L H
Sbjct: 67 RHQRTHTGE------------------------------KPYKCPECGKSFSQRANLRAH 96
Query: 385 VGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVH 444
H G P+ C C KSF+Q L+ H HTG ++C CGK F + + + H+ H
Sbjct: 97 QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH 156
Query: 445 SGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKP 477
+GEKP KC CG + L H R HTG+K
Sbjct: 157 TGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 131 bits (331), Expect = 1e-35
Identities = 59/161 (36%), Positives = 88/161 (54%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCH 64
+ CP CGK + L H +TH+ +P+ C CG+ + KK L H H+G P+ C
Sbjct: 22 YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81
Query: 65 FCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGL 124
C KSF+Q+ L H H G K Y C CGK F + HQ H+GE+ KC CG
Sbjct: 82 ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141
Query: 125 ALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+ + + +L+ H HTG++P++C CGK F+++ VH++
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Score = 122 bits (310), Expect = 1e-32
Identities = 50/148 (33%), Positives = 75/148 (50%)
Query: 18 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLV 77
S A +P+ C CG+ + L H H+G P+ C C KSF+ K L
Sbjct: 7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLT 66
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHML 137
+H H G K Y+C CGK F + + HQ H+GE+ C CG + + +HL H
Sbjct: 67 RHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR 126
Query: 138 VHTGDRPHECSVCGKRFAKKWNAQVHKK 165
HTG++P++C CGK F+++ N H++
Sbjct: 127 THTGEKPYKCPECGKSFSREDNLHTHQR 154
Score = 114 bits (287), Expect = 2e-29
Identities = 50/140 (35%), Positives = 72/140 (51%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCH 64
++CP CGK + +L H +TH+ +P+ C CG+ + + L H H+G P+ C
Sbjct: 50 YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP 109
Query: 65 FCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGL 124
C KSF+Q L H H G K Y+C CGK F + HQ H+GE+ KC CG
Sbjct: 110 ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGK 169
Query: 125 ALTTKSHLNRHMLVHTGDRP 144
+ + + LN H HTG +
Sbjct: 170 SFSRRDALNVHQRTHTGKKT 189
Score = 109 bits (274), Expect = 1e-27
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 45 KKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSY 104
+ + + G P+ C C KSF++ L +H H G K Y+C CGK F
Sbjct: 6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65
Query: 105 KFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
HQ H+GE+ KC CG + + +++L H HTG++P+ C CGK F++ + + H+
Sbjct: 66 TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ 125
Query: 165 K 165
+
Sbjct: 126 R 126
Score = 92.9 bits (232), Expect = 5e-22
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 69 SFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTT 128
S V + G K Y C CGK F HQ H+GE+ KC CG + +
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 129 KSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
K L RH HTG++P++C CGK F+++ N + H++
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR 98
Score = 65.5 bits (161), Expect = 1e-12
Identities = 45/177 (25%), Positives = 65/177 (36%), Gaps = 63/177 (35%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGM 301
TGE+ P ++CP CGK + + L AH +TH+ +P+ C CG+ + L H
Sbjct: 73 TGEK---P--YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT 127
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHS 361
H G P+ C C KSF+++ L H HTG
Sbjct: 128 HTGEKPYKCPECGKSFSREDNLHTHQRTHTGE---------------------------- 159
Query: 362 DLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
+P+ C CG KSF+++ L H HTG
Sbjct: 160 --KPYKCPECG----------------------------KSFSRRDALNVHQRTHTG 186
Score = 42.4 bits (101), Expect = 1e-04
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 124 LALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
++ S + G++P+ C CGK F++ + H+
Sbjct: 1 ISEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQ 41
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 121 bits (307), Expect = 2e-32
Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 14/188 (7%)
Query: 384 HVGMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQCD--LCGKRFIHQKSFYI 439
+ + CSF C ++ + LQ HL HTG F C C K F
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 440 HKMVHSGEKPIKCS--ACGLAVLSSSHLKRHFRVHTGEK--PYQCTT--CGKRLRRTVSE 493
H + H+GEK C C L + +++K+HF K Y C CGK ++ ++
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKH-NQ 121
Query: 494 LNAHIQTHSDLRPFVC--EICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLV 551
L H +H+ P+ C E C + + + L H +H+G C+ +
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181
Query: 552 KH-LNIHN 558
KH H
Sbjct: 182 KHVAECHQ 189
Score = 114 bits (288), Expect = 9e-30
Identities = 44/165 (26%), Positives = 62/165 (37%), Gaps = 13/165 (7%)
Query: 411 KHLPIHTGSTRFQCDL--CGKRFIHQKSFYIHKMVHSGEKPIKCS--ACGLAVLSSSHLK 466
+ R+ C CG + H H+GEKP C C S HL
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 467 RHFRVHTGEKPYQCT--TCGKRLRRTVSELNAHIQTHSD--LRPFVCEI--CGQGYKMKK 520
RH HTGEK + C C R + + H + + +VC CG+ +K
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTK-ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN 120
Query: 521 ALLVHVGMHSGIHPFTCH--FCNKSFTQKIGLVKHLNIHNGTKKY 563
L VH H+ P+ C C+K F+ L +H +H G
Sbjct: 121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 165
Score = 113 bits (286), Expect = 2e-29
Identities = 55/222 (24%), Positives = 77/222 (34%), Gaps = 50/222 (22%)
Query: 298 HVGMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNA 355
+ + CSF C ++ + LQ HL HTG
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGE---------------------- 40
Query: 356 HIQTHSDLRPFVCE--ICGQGYKMKKALLVHVGMHNGINPFTCS--FCNKSFTQKVGLQK 411
+PF C+ C +G+ L H H G FTC C+ FT K ++K
Sbjct: 41 --------KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK 92
Query: 412 HLPIHTG--STRFQCDL--CGKRFIHQKSFYIHKMVHSGEKPIKCS--ACGLAVLSSSHL 465
H + C CGK F +H+ H+ + P +C C S L
Sbjct: 93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRL 152
Query: 466 KRHFRVHTGE---KPYQCTTCGKRLRRTVSELNAHIQ-THSD 503
KRH +VH G K C+ GK T + H+ H D
Sbjct: 153 KRHEKVHAGYPCKKDDSCSFVGK----TWTLYLKHVAECHQD 190
Score = 111 bits (280), Expect = 1e-28
Identities = 53/176 (30%), Positives = 73/176 (41%), Gaps = 16/176 (9%)
Query: 6 ECPTCGKKWRTVSELNAHIQTHSDLRPFVCE--ICGQGYKMKKALLVHVGMHSGIHPFTC 63
CG + +L AH+ H+ +PF C+ C +G+ L H H+G FTC
Sbjct: 16 SFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTC 75
Query: 64 --HFCNKSFTQKIGLVKHLNIHNGTKK--YQCHL--CGKGFIHHTSYKFHQLVHSGERNV 117
C+ FT K + KH N + K Y CH CGK F H K HQ H+ +
Sbjct: 76 DSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY 135
Query: 118 KC--DICGLALTTKSHLNRHMLVHTGD---RPHECSVCGKRFAKKWNAQVHKKKVH 168
+C + C + S L RH VH G + CS GK + H + H
Sbjct: 136 ECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWT---LYLKHVAECH 188
Score = 85.7 bits (213), Expect = 1e-19
Identities = 38/146 (26%), Positives = 56/146 (38%), Gaps = 11/146 (7%)
Query: 6 EC--PTCGKKWRTVSELNAHIQTHSDLRPFVCE--ICGQGYKMKKALLVHVGMHSG--IH 59
C C K + ++ L H TH+ + F C+ C + K + H I
Sbjct: 44 PCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKIC 103
Query: 60 PFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQCH--LCGKGFIHHTSYKFHQLVHSGER 115
+ CHF C K+F + L H H Y+C C K F + K H+ VH+G
Sbjct: 104 VYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 163
Query: 116 NVKCDICGLALTTKSHLNRHML-VHT 140
K D C T + +H+ H
Sbjct: 164 CKKDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 85.3 bits (212), Expect = 2e-19
Identities = 51/243 (20%), Positives = 76/243 (31%), Gaps = 72/243 (29%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE--ICGQGYKMKKALLVHV 299
+ I CG + +L AH+ H+ +PF C+ C +G+ L H
Sbjct: 8 VVYK---RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS 64
Query: 300 GMHNGINPFTCS--FCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHI 357
H G FTC C+ FT K ++KH +
Sbjct: 65 LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHN------IKI---------------- 102
Query: 358 QTHSDLRPFVCEI--CGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPI 415
+VC CG K+F + L+ H
Sbjct: 103 ------CVYVCHFENCG----------------------------KAFKKHNQLKVHQFS 128
Query: 416 HTGSTRFQC--DLCGKRFIHQKSFYIHKMVHSG---EKPIKCSACGLAVLSSSHLKRHFR 470
HT ++C + C KRF H+ VH+G +K CS G + +LK
Sbjct: 129 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKT--WTLYLKHVAE 186
Query: 471 VHT 473
H
Sbjct: 187 CHQ 189
Score = 79.9 bits (198), Expect = 2e-17
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 77 VKHLNIHNGTKKYQCHL--CGKGFIHHTSYKFHQLVHSGERNVKCD--ICGLALTTKSHL 132
+ + K+Y C CG + + + H H+GE+ C C T+ HL
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60
Query: 133 NRHMLVHTGDRPHECS--VCGKRFAKKWNAQVHKK 165
RH L HTG++ C C RF K N + H
Sbjct: 61 TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN 95
Score = 50.3 bits (121), Expect = 2e-07
Identities = 22/99 (22%), Positives = 32/99 (32%), Gaps = 29/99 (29%)
Query: 468 HFRVHTGEKPYQCTT--CGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVH 525
+ K Y C+ CG + +L AH+ H+ +PF C+ G
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKN-WKLQAHLCKHTGEKPFPCKEEG------------ 49
Query: 526 VGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
C K FT L +H H G K +
Sbjct: 50 --------------CEKGFTSLHHLTRHSLTHTGEKNFT 74
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 113 bits (285), Expect = 9e-30
Identities = 39/152 (25%), Positives = 58/152 (38%), Gaps = 14/152 (9%)
Query: 371 CGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQ------- 423
G + K L + C+++F+ L H+ + Q
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 424 --CDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA--CGLAVLSSSHLKRHFRVHTGEKPYQ 479
C GK F + H VH+GEKP C CG S +LK H R HTGEKP++
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 480 CTT--CGKRLRRTVSELNAHIQTHSDLRPFVC 509
C C +R + S+ H+ H+ +
Sbjct: 123 CEFEGCDRRFANS-SDRKKHMHVHTSDKSGPS 153
Score = 105 bits (264), Expect = 7e-27
Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 13/147 (8%)
Query: 348 RTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFT---------CSF 398
+ + + + + C + + L+ HV M + P C
Sbjct: 8 QPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR 67
Query: 399 CNKSFTQKVGLQKHLPIHTGSTRFQCDL--CGKRFIHQKSFYIHKMVHSGEKPIKCSA-- 454
KSF K L H+ +HTG F C CGK F ++ IHK H+GEKP KC
Sbjct: 68 EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEG 127
Query: 455 CGLAVLSSSHLKRHFRVHTGEKPYQCT 481
C +SS K+H VHT +K +
Sbjct: 128 CDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 103 bits (258), Expect = 5e-26
Identities = 38/177 (21%), Positives = 53/177 (29%), Gaps = 38/177 (21%)
Query: 399 CNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKP--------- 449
S I C + F H + P
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 450 IKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT--CGKRLRRTVSELNAHIQTHSDLRPF 507
+C G + + L H RVHTGEKP+ C CGK R+ L H +TH+ +PF
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARS-ENLKIHKRTHTGEKPF 121
Query: 508 VCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
CE G C++ F KH+++H K
Sbjct: 122 KCEFEG--------------------------CDRRFANSSDRKKHMHVHTSDKSGP 152
Score = 97.0 bits (242), Expect = 7e-24
Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 10 CGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHF---- 65
G + + + + + C + + L+ HV M P +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 66 -----CNKSFTQKIGLVKHLNIHNGTKKYQCHL--CGKGFIHHTSYKFHQLVHSGERNVK 118
KSF K LV H+ +H G K + C CGK F + K H+ H+GE+ K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 119 CDI--CGLALTTKSHLNRHMLVHTGDRPHECS 148
C+ C S +HM VHT D+ S
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 93.9 bits (234), Expect = 8e-23
Identities = 33/140 (23%), Positives = 51/140 (36%), Gaps = 13/140 (9%)
Query: 38 CGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ------- 90
G + K L + C+++F+ LV H+ + + Q
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 91 --CHLCGKGFIHHTSYKFHQLVHSGERNVKCDI--CGLALTTKSHLNRHMLVHTGDRPHE 146
C GK F H VH+GE+ C CG +L H HTG++P +
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 147 CSV--CGKRFAKKWNAQVHK 164
C C +RFA + + H
Sbjct: 123 CEFEGCDRRFANSSDRKKHM 142
Score = 63.1 bits (154), Expect = 5e-12
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEI--CGQGYKMKKALLVHVGMHSGIHPFT 62
ECP GK ++ +L HI+ H+ +PF C CG+ + + L +H H+G PF
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 63 CHF--CNKSFTQKIGLVKHLNIHNGTKKYQC 91
C F C++ F KH+++H K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 57.7 bits (140), Expect = 3e-10
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEI--CGQGYKMKKALLVHVGMHNGINPFT 309
ECP GK ++ +L HI+ H+ +PF C CG+ + + L +H H G PF
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 310 CSF--CNKSFTQKVGLQKHLPIHTG 332
C F C++ F +KH+ +HT
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTS 147
Score = 36.1 bits (84), Expect = 0.009
Identities = 5/48 (10%), Positives = 9/48 (18%)
Query: 122 CGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVHG 169
G + + C + F+ H H
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV 50
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 110 bits (277), Expect = 6e-29
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIH---KMVH 444
+G + C C+K F K L+ H HTG F+C CGK + +++ H ++
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 445 SGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAH 497
E+ CS C L+ H HTGE PY+C++C ++ + +L +H
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQK-KDLQSH 113
Score = 108 bits (273), Expect = 2e-28
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQ---LVH 111
SG C C+K F K L H H G K ++C CGK + + H+ ++
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 112 SGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVH 168
E+ C +C + L HM+ HTG+ P++CS C ++F +K + Q H K+H
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 103 bits (259), Expect = 1e-26
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAH---IQT 500
SG ++C C LS +LK H R HTGEKP++C CGK R L H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRK-ENLLEHEARNCM 60
Query: 501 HSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKH-LNIHNG 559
+ + F C +C + ++ + L +H+ H+G P+ C C++ F QK L H + +H+G
Sbjct: 61 NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Query: 560 TK 561
Sbjct: 121 PS 122
Score = 92.6 bits (231), Expect = 1e-22
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 31 RPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKH---LNIHNGTK 87
C C + + K L VH H+G PF C C K + +K L++H ++ +
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65
Query: 88 KYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHML-VHTG 141
+ C +C + F + H + H+GE KC C K L HM+ +H+G
Sbjct: 66 VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 91.4 bits (228), Expect = 3e-22
Identities = 37/179 (20%), Positives = 59/179 (32%), Gaps = 62/179 (34%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHS 361
+G + C C+K F K L+ H HTG
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGE---------------------------- 33
Query: 362 DLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKH---LPIHTG 418
+PF C CG K + +K L +H ++
Sbjct: 34 --KPFECPKCG----------------------------KCYFRKENLLEHEARNCMNRS 63
Query: 419 STRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRH-FRVHTGEK 476
F C +C + F + +H + H+GE P KCS+C + L+ H ++H+G
Sbjct: 64 EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 88.7 bits (221), Expect = 2e-21
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 6 ECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVH---VGMHSGIHPFT 62
ECPTC KK+ + L H + H+ +PF C CG+ Y K+ LL H M+ FT
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 63 CHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQL-VHSGER 115
C C ++F +++ L H+ H G Y+C C + F+ + H + +HSG
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 72.9 bits (180), Expect = 8e-16
Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 34/145 (23%)
Query: 278 RPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKH---LPIHTGST 334
C C + + K L VH H G PF C C K + +K L +H ++
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE- 64
Query: 335 RFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPF 394
+ F C +C + ++ + L +H+ H G P+
Sbjct: 65 -----------------------------QVFTCSVCQETFRRRMELRLHMVSHTGEMPY 95
Query: 395 TCSFCNKSFTQKVGLQKHLP-IHTG 418
CS C++ F QK LQ H+ +H+G
Sbjct: 96 KCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 66.8 bits (164), Expect = 1e-13
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVH--- 298
+G ECPTC KK+ + L H + H+ +PF C CG+ Y K+ LL H
Sbjct: 3 SGSSG-----VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEAR 57
Query: 299 VGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
M+ FTCS C ++F +++ L+ H+ HTG
Sbjct: 58 NCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91
Score = 59.1 bits (144), Expect = 6e-11
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 252 HECPTCGKKWRTVSELNAH---IQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPF 308
ECP CGK + L H + + F C +C + ++ + L +H+ H G P+
Sbjct: 36 FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPY 95
Query: 309 TCSFCNKSFTQKVGLQKHLP-IHTG 332
CS C++ F QK LQ H+ +H+G
Sbjct: 96 KCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 37.5 bits (88), Expect = 0.002
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG C C+K F K L H H G K ++
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFE 37
Score = 34.8 bits (81), Expect = 0.018
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVH-VGMHSG 57
C C + +R EL H+ +H+ P+ C C Q + KK L H + +HSG
Sbjct: 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 107 bits (270), Expect = 3e-28
Identities = 30/102 (29%), Positives = 38/102 (37%)
Query: 381 LLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIH 440
F C FC + FT+ L H HT + CD+C K F Q H
Sbjct: 5 SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64
Query: 441 KMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+ +HS EKP KC CG S L H +H +
Sbjct: 65 RYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106
Score = 97.9 bits (245), Expect = 7e-25
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 408 GLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKR 467
G F C CG+ F + IH+ H+ E+P C C A HL+
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
H +H+ EKP++C CGK ++ L H H
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQS-RTLAVHKTLHMQTSSPTA 104
Score = 96.3 bits (241), Expect = 3e-24
Identities = 25/101 (24%), Positives = 36/101 (35%)
Query: 48 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFH 107
F C FC + FT+ L+ H H + Y C +C K F + H
Sbjct: 5 SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64
Query: 108 QLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+ +HS E+ KC CG L H +H +
Sbjct: 65 RYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 92.5 bits (231), Expect = 7e-23
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 462 SSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKA 521
SS +K + C CG+ ++ L H +TH+D RP+ C+IC + ++ +
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKS-YNLLIHERTHTDERPYTCDICHKAFRRQDH 60
Query: 522 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
L H +HS PF C C K F Q L H +H T
Sbjct: 61 LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT 103
Score = 92.1 bits (230), Expect = 1e-22
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHI 498
++ +K C CG S +L H R HT E+PY C C K RR L H
Sbjct: 7 GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQ-DHLRDHR 65
Query: 499 QTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
HS +PF C+ CG+G+ + L VH +H T
Sbjct: 66 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 87.9 bits (219), Expect = 3e-21
Identities = 28/91 (30%), Positives = 41/91 (45%)
Query: 75 GLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNR 134
G K++ C CG+ F + H+ H+ ER CDIC A + HL
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
H +H+ ++P +C CGK F + VHK
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94
Score = 80.9 bits (201), Expect = 9e-19
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 18 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLV 77
S + + F+C+ CG+ + LL+H H+ P+TC C+K+F ++ L
Sbjct: 3 SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
H IH+ K ++C CGKGF + H+ +H +
Sbjct: 63 DHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 67.1 bits (165), Expect = 7e-14
Identities = 28/87 (32%), Positives = 40/87 (45%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCH 64
C CG+ + L H +TH+D RP+ C+IC + ++ + L H +HS PF C
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 65 FCNKSFTQKIGLVKHLNIHNGTKKYQC 91
C K F Q L H +H T
Sbjct: 78 ECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 66.3 bits (163), Expect = 1e-13
Identities = 28/130 (21%), Positives = 41/130 (31%), Gaps = 30/130 (23%)
Query: 295 LLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELN 354
F C FC + FT+ L H HT
Sbjct: 5 SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDE--------------------- 43
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLP 414
RP+ C+IC + ++ + L H +H+ PF C C K F Q L H
Sbjct: 44 ---------RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94
Query: 415 IHTGSTRFQC 424
+H ++
Sbjct: 95 LHMQTSSPTA 104
Score = 61.3 bits (150), Expect = 5e-12
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
C CG+ + L H +TH+D RP+ C+IC + ++ + L H +H+ PF C
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 312 FCNKSFTQKVGLQKHLPIHTG 332
C K F Q L H +H
Sbjct: 78 ECGKGFCQSRTLAVHKTLHMQ 98
Score = 58.2 bits (142), Expect = 8e-11
Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 30/133 (22%)
Query: 265 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 324
S + + F+C+ CG+ + LL+H H P+TC C+K+F ++ L+
Sbjct: 3 SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62
Query: 325 KHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVH 384
H IH+ +PF C+ CG+G+ + L VH
Sbjct: 63 DHRYIHSKE------------------------------KPFKCQECGKGFCQSRTLAVH 92
Query: 385 VGMHNGINPFTCS 397
+H + T +
Sbjct: 93 KTLHMQTSSPTAA 105
Score = 44.0 bits (105), Expect = 8e-06
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 129 KSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
S + L + C CG+ F K +N +H++
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER 38
Score = 41.7 bits (99), Expect = 5e-05
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGM 301
T ER P + C C K +R L H HS +PF C+ CG+G+ + L VH +
Sbjct: 41 TDER---P--YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL 95
Query: 302 HNGINPFTCS 311
H + T +
Sbjct: 96 HMQTSSPTAA 105
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 106 bits (267), Expect = 1e-27
Identities = 45/115 (39%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 393 PFTCS--FCNKSFTQKVGLQKHLPIHTGSTRFQCDL--CGKRFIHQKSFYIHKMVHSGEK 448
PF C+ CNK + + LQ H HTG +QCD C +RF H+ H+G K
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65
Query: 449 PIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT--CGKRLRRTVSELNAHIQTH 501
P +C C S HLK H R HTGEKP+ C C K+ R+ EL H H
Sbjct: 66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARS-DELVRHHNMH 119
Score = 95.3 bits (238), Expect = 1e-23
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 445 SGEKPIKCS--ACGLAVLSSSHLKRHFRVHTGEKPYQCTT--CGKRLRRTVSELNAHIQT 500
S ++P C+ C SHL+ H R HTGEKPYQC C +R R+ +L H +
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRS-DQLKRHQRR 60
Query: 501 HSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHF--CNKSFTQKIGLVKHLNIH 557
H+ ++PF C+ C + + L H H+G PF+C + C K F + LV+H N+H
Sbjct: 61 HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 93.7 bits (234), Expect = 4e-23
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 60 PFTC--HFCNKSFTQKIGLVKHLNIHNGTKKYQCHL--CGKGFIHHTSYKFHQLVHSGER 115
PF C CNK + + L H H G K YQC C + F K HQ H+G +
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65
Query: 116 NVKCDICGLALTTKSHLNRHMLVHTGDRPHECSV--CGKRFAKKWNAQVHKK 165
+C C + HL H HTG++P C C K+FA+ H
Sbjct: 66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117
Score = 74.5 bits (184), Expect = 2e-16
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 5 HEC--PTCGKKWRTVSELNAHIQTHSDLRPFVCEI--CGQGYKMKKALLVHVGMHSGIHP 60
C P C K++ +S L H + H+ +P+ C+ C + + L H H+G+ P
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 61 FTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHL--CGKGFIHHTSYKFHQLVH 111
F C C + F++ L H H G K + C C K F H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 69.1 bits (170), Expect = 2e-14
Identities = 36/144 (25%), Positives = 51/144 (35%), Gaps = 36/144 (25%)
Query: 307 PFTCS--FCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLR 364
PF C+ CNK + + LQ H HTG +
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGE------------------------------K 35
Query: 365 PFVCEI--CGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRF 422
P+ C+ C + + L H H G+ PF C C + F++ L+ H HTG F
Sbjct: 36 PYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPF 95
Query: 423 QCDL--CGKRFIHQKSFYIHKMVH 444
C C K+F H +H
Sbjct: 96 SCRWPSCQKKFARSDELVRHHNMH 119
Score = 61.8 bits (151), Expect = 5e-12
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Query: 242 TGERACMPLIHEC--PTCGKKWRTVSELNAHIQTHSDLRPFVCEI--CGQGYKMKKALLV 297
+ +R P C P C K++ +S L H + H+ +P+ C+ C + + L
Sbjct: 2 SEKR---P--FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKR 56
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHI 357
H H G+ PF C C + F++ L+ H HTG F + EL H
Sbjct: 57 HQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH 116
Query: 358 QTH 360
H
Sbjct: 117 NMH 119
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 105 bits (264), Expect = 2e-27
Identities = 32/95 (33%), Positives = 42/95 (44%)
Query: 386 GMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHS 445
G P C C K F++K L+ H+ HTG ++C C S H +HS
Sbjct: 1 GSSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60
Query: 446 GEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
E+P KC C A +SS L H R HTG+
Sbjct: 61 DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 97.5 bits (244), Expect = 8e-25
Identities = 33/95 (34%), Positives = 40/95 (42%)
Query: 53 GMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHS 112
G P C C K F++K L H+ H G K Y+C C +S H +HS
Sbjct: 1 GSSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60
Query: 113 GERNVKCDICGLALTTKSHLNRHMLVHTGDRPHEC 147
ER KC IC A S L H+ HTGD
Sbjct: 61 DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 94.4 bits (236), Expect = 1e-23
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 416 HTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGE 475
S +C++CGK F + H H+G KP KC C A SS L +H R+H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 476 KPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+P++C C R + S+L H+++H+
Sbjct: 63 RPFKCQICPYASRNS-SQLTVHLRSHTGDSGPSS 95
Score = 90.6 bits (226), Expect = 2e-22
Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSD 503
P KC CG LK H R HTG KPY+C TC + S LN H++ HSD
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADS-SSLNKHLRIHSD 61
Query: 504 LRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
RPF C+IC + L VH+ H+G +
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 82.1 bits (204), Expect = 2e-19
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 83 HNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGD 142
+ ++C +CGK F K H H+G + KC C A S LN+H+ +H+ +
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 143 RPHECSVCGKRFAKKWNAQVHKK 165
RP +C +C VH +
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLR 85
Score = 76.7 bits (190), Expect = 2e-17
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 26 THSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNG 85
+ P CE+CG+ + K L H+ H+G+ P+ C C+ + L KHL IH+
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 86 TKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ ++C +C + + H H+G+
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 65.9 bits (162), Expect = 1e-13
Identities = 24/87 (27%), Positives = 38/87 (43%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCH 64
H+C CGK + +L H++ H+ ++P+ C+ C +L H+ +HS PF C
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 65 FCNKSFTQKIGLVKHLNIHNGTKKYQC 91
C + L HL H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 62.1 bits (152), Expect = 2e-12
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGM 301
P H+C CGK + +L H++ H+ ++P+ C+ C +L H+ +
Sbjct: 4 GSSG---P--HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI 58
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
H+ PF C C + L HL HTG
Sbjct: 59 HSDERPFKCQICPYASRNSSQLTVHLRSHTG 89
Score = 53.2 bits (129), Expect = 3e-09
Identities = 30/124 (24%), Positives = 45/124 (36%), Gaps = 30/124 (24%)
Query: 273 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+ P CE+CG+ + K L H+ H G+ P+ C C+ + L KHL IH+
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 333 STRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGIN 392
RPF C+IC + L VH+ H G +
Sbjct: 62 E------------------------------RPFKCQICPYASRNSSQLTVHLRSHTGDS 91
Query: 393 PFTC 396
+
Sbjct: 92 GPSS 95
Score = 53.2 bits (129), Expect = 3e-09
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 29/93 (31%)
Query: 472 HTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
P++C CGK R +L H++ H+ ++P+ C+ C
Sbjct: 3 SGSSGPHKCEVCGKCFSRK-DKLKTHMRCHTGVKPYKCKTCD------------------ 43
Query: 532 IHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+ L KHL IH+ + ++
Sbjct: 44 ----------YAAADSSSLNKHLRIHSDERPFK 66
Score = 41.6 bits (99), Expect = 4e-05
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGM 301
TG + P ++C TC S LN H++ HSD RPF C+IC + L VH+
Sbjct: 32 TGVK---P--YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRS 86
Query: 302 HNGINPFTC 310
H G + +
Sbjct: 87 HTGDSGPSS 95
Score = 36.6 bits (86), Expect = 0.002
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 527 GMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
G P C C K F++K L H+ H G K Y
Sbjct: 1 GSSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPY 37
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 103 bits (259), Expect = 1e-26
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGE 447
+G + C C KSFT K +H+ +H G + C +CGK+F + H +H+G
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63
Query: 448 KPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGK 485
KP +C+ C + H V + K Y+ +
Sbjct: 64 KPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQ 99
Score = 99.1 bits (248), Expect = 4e-25
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGE 114
SG + C C KSFT K +H+++H G + Y C +CGK F H +H+G
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63
Query: 115 RNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKK 157
+ +C+IC + +RH V + + +E + + +
Sbjct: 64 KPYECNICAKRFMWRDSFHRH--VTSCTKSYEAAKAEQNTTEA 104
Score = 94.4 bits (236), Expect = 2e-23
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 415 IHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTG 474
+G + C CGK F H+ H +H G +P C CG HL H ++HTG
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 475 EKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQ 514
KPY+C C KR + H+ S + + Q
Sbjct: 63 IKPYECNICAKRFMWR-DSFHRHV--TSCTKSYEAAKAEQ 99
Score = 88.3 bits (220), Expect = 3e-21
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 26 THSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNG 85
S + + C+ CG+ + K H+ MH G+ P+ C C K F K LV H+ IH G
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 86 TKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLN 133
K Y+C++C K F+ S FH+ V S ++ + T S +
Sbjct: 63 IKPYECNICAKRFMWRDS--FHRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 85.6 bits (213), Expect = 2e-20
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 359 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
S + + C+ CG+ + K H+ MH G+ P+ C C K F K L H+ IHTG
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 419 STRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHL 465
++C++C KRF+ + SF H+ V S K + + +S
Sbjct: 63 IKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 82.1 bits (204), Expect = 4e-19
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 82 IHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTG 141
+G K Y C CGK F H + H +H G R C +CG K HL HM +HTG
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 142 DRPHECSVCGKRFAKK 157
+P+EC++C KRF +
Sbjct: 63 IKPYECNICAKRFMWR 78
Score = 76.7 bits (190), Expect = 2e-17
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 32/122 (26%)
Query: 443 VHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHS 502
SG+K C CG + S RH +H G +PY C CGK
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGK----------------- 45
Query: 503 DLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKK 562
+KMK L+ H+ +H+GI P+ C+ C K F + H ++ + TK
Sbjct: 46 ------------KFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKS 91
Query: 563 YQ 564
Y+
Sbjct: 92 YE 93
Score = 72.9 bits (180), Expect = 6e-16
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 10 CGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKS 69
CGK + S+ + H+ H LRP+ C +CG+ +KMK L+ H+ +H+GI P+ C+ C K
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 70 FTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTS 103
F + H ++ + TK Y+ + +
Sbjct: 75 FMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASG 106
Score = 69.4 bits (171), Expect = 1e-14
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 33/132 (25%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHS 361
+G + C C KSFT K +H+ +H G
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLG----------------------------- 34
Query: 362 DLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTR 421
LRP+ C +CG+ +KMK L+ H+ +H GI P+ C+ C K F + +H + + +
Sbjct: 35 -LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH--VTSCTKS 91
Query: 422 FQCDLCGKRFIH 433
++ +
Sbjct: 92 YEAAKAEQNTTE 103
Score = 58.6 bits (143), Expect = 6e-11
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGM 301
+G++ + C CGK + S+ + H+ H LRP+ C +CG+ +KMK L+ H+ +
Sbjct: 6 SGDK---L--YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 59
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
H GI P+ C+ C K F + +H + +
Sbjct: 60 HTGIKPYECNICAKRFMWRDSFHRH--VTSC 88
Score = 48.6 bits (117), Expect = 2e-07
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGM 301
G R P + C CGKK++ L H++ H+ ++P+ C IC + + + + H +
Sbjct: 33 LGLR---P--YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHV 85
Query: 302 HNGINPFTCSFCNKSFTQKVGL 323
+ + + ++ T+ G
Sbjct: 86 TSCTKSYEAAKAEQNTTEASGP 107
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 101 bits (255), Expect = 7e-26
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 364 RPFVCEI--CGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTR 421
R C C + ++ A+ H+ H G C+ C K+F + L++H +HTG
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 422 FQCDL--CGKRFIHQKSFYIHKMVHSGEKPIKCSA--CGLAVLSSSHLKRHFRVHTGEKP 477
FQC CGKRF + H +H+G++P C C S++LK H H K
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122
Query: 478 YQ 479
Q
Sbjct: 123 NQ 124
Score = 99.9 bits (250), Expect = 3e-25
Identities = 49/147 (33%), Positives = 59/147 (40%), Gaps = 32/147 (21%)
Query: 422 FQCDL--CGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQ 479
C C K F + H H G + C+ CG A + SS LKRH VHTGEKP+Q
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 480 CTT--CGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
CT CGKR L H++ H+ RP+VC G
Sbjct: 65 CTFEGCGKRFSLD-FNLRTHVRIHTGDRPYVCPFDG------------------------ 99
Query: 538 HFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
CNK F Q L H+ H K Q
Sbjct: 100 --CNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 95.3 bits (238), Expect = 1e-23
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 60 PFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNV 117
C C K F + KHL+ H G + + C CGK F+ + K HQLVH+GE+
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63
Query: 118 KCDI--CGLALTTKSHLNRHMLVHTGDRPHECSV--CGKRFAKKWNAQVHKK 165
+C CG + +L H+ +HTGDRP+ C C K+FA+ N + H
Sbjct: 64 QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115
Score = 89.1 bits (222), Expect = 2e-21
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 31 RPFVCEI--CGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKK 88
R C C + ++ A+ H+ H G C C K+F + L +H +H G K
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 89 YQCHL--CGKGFIHHTSYKFHQLVHSGERNVKCDI--CGLALTTKSHLNRHMLVHTGDRP 144
+QC CGK F + + H +H+G+R C C ++L H+L H +
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122
Query: 145 HE 146
++
Sbjct: 123 NQ 124
Score = 70.2 bits (173), Expect = 6e-15
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 87 KKYQCHL--CGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRP 144
+ C C K F +++ + H H G R C CG A S L RH LVHTG++P
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 145 HECSV--CGKRFAKKWNAQVHKK 165
+C+ CGKRF+ +N + H +
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVR 85
Score = 62.9 bits (154), Expect = 3e-12
Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 28/113 (24%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCH 64
H C CGK + S+L H H+ +PF C G
Sbjct: 35 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG------------------------- 69
Query: 65 FCNKSFTQKIGLVKHLNIHNGTKKYQCHL--CGKGFIHHTSYKFHQLVHSGER 115
C K F+ L H+ IH G + Y C C K F T+ K H L H+ +
Sbjct: 70 -CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Score = 62.5 bits (153), Expect = 4e-12
Identities = 44/171 (25%), Positives = 57/171 (33%), Gaps = 61/171 (35%)
Query: 252 HECPT--CGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFT 309
CP C K +R S + H+ TH R VC CG+ + L H +H G PF
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 310 CSF--CNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFV 367
C+F C K F+ L+ H+ IHTG RP+V
Sbjct: 65 CTFEGCGKRFSLDFNLRTHVRIHTGD------------------------------RPYV 94
Query: 368 CEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
C G CNK F Q L+ H+ H
Sbjct: 95 CPFDG--------------------------CNKKFAQSTNLKSHILTHAK 119
Score = 43.3 bits (103), Expect = 2e-05
Identities = 19/92 (20%), Positives = 28/92 (30%), Gaps = 32/92 (34%)
Query: 475 EKPYQCTT--CGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGI 532
+ C C K R S + H+ TH G +
Sbjct: 3 PRTIACPHKGCTKMFRDN-SAMRKHLHTH-------------GPR--------------- 33
Query: 533 HPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
C C K+F + L +H +H G K +Q
Sbjct: 34 -VHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 101 bits (253), Expect = 2e-25
Identities = 46/206 (22%), Positives = 65/206 (31%), Gaps = 64/206 (31%)
Query: 307 PFTCSFCNKSFTQKVGLQKHLP---IHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDL 363
C++ F + L H+ IH
Sbjct: 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGER------------------------------ 32
Query: 364 RPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQ 423
+ FVC G CS + F + L H+ HTG +
Sbjct: 33 KEFVCHWGG-----------------------CSRELRPFKAQYMLVVHMRRHTGEKPHK 69
Query: 424 CDL--CGKRFIHQKSFYIHKMVHSGEKPIKC--SACGLAVLSSSHLKRH-FRVHTGEKPY 478
C C K + ++ H H+GEKP C C A ++S +H R H+ EKPY
Sbjct: 70 CTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPY 129
Query: 479 QCTT--CGKRLRRTVSELNAHIQTHS 502
C C KR S L H++T
Sbjct: 130 VCKLPGCTKRYTDP-SSLRKHVKTVH 154
Score = 100 bits (252), Expect = 3e-25
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 16/153 (10%)
Query: 422 FQCDLCGKRFIHQKSFYIH---KMVHSGEKPIKCSACGLAVLS-----SSHLKRHFRVHT 473
+ D C + F Q+ H + +H K C G + L H R HT
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 474 GEKPYQCTT--CGKRLRRTVSELNAHIQTHSDLRPFVCE--ICGQGYKMKKALLVHVG-M 528
GEKP++CT C K R L H+++H+ +P++CE C + + H
Sbjct: 64 GEKPHKCTFEGCRKSYSRL-ENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122
Query: 529 HSGIHPFTCHF--CNKSFTQKIGLVKHLNIHNG 559
HS P+ C C K +T L KH+ +G
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 95.7 bits (239), Expect = 2e-23
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 6 ECPTCGKKWRTVSELNAHIQT---HSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFT 62
C +++ + +L HI + H + + FVC G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----------------------- 41
Query: 63 CHFCNKSFTQKIGLVKHLNIHNGTKKYQCHL--CGKGFIHHTSYKFHQLVHSGERNVKC- 119
C + F + LV H+ H G K ++C C K + + K H H+GE+ C
Sbjct: 42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101
Query: 120 -DICGLALTTKSHLNRHML-VHTGDRPHECSV--CGKRFAKKWNAQVHKKKVHG 169
+ C A + S +H H+ ++P+ C + C KR+ + + H K VHG
Sbjct: 102 HEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 86.5 bits (215), Expect = 4e-20
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 60 PFTCHFCNKSFTQKIGLVKHLN---IHNGTKKYQCHLCG-----KGFIHHTSYKFHQLVH 111
C++ F + LV H+N IH K++ CH G + F H H
Sbjct: 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH 62
Query: 112 SGERNVKCDI--CGLALTTKSHLNRHMLVHTGDRPHEC--SVCGKRFAKKWNAQVHKKKV 167
+GE+ KC C + + +L H+ HTG++P+ C C K F+ + H+ +
Sbjct: 63 TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122
Query: 168 H 168
H
Sbjct: 123 H 123
Score = 84.6 bits (210), Expect = 1e-19
Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 12/130 (9%)
Query: 447 EKPIKCSACGLAVLSSSHLKRHF---RVHTGEKPYQCTTCGKRLRR----TVSELNAHIQ 499
E + C S L H +H K + C G L H++
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 500 THSDLRPFVCEI--CGQGYKMKKALLVHVGMHSGIHPFTCHF--CNKSFTQKIGLVKHLN 555
H+ +P C C + Y + L H+ H+G P+ C C+K+F+ KH N
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 556 -IHNGTKKYQ 564
H+ K Y
Sbjct: 121 RTHSNEKPYV 130
Score = 79.2 bits (196), Expect = 1e-17
Identities = 41/210 (19%), Positives = 64/210 (30%), Gaps = 69/210 (32%)
Query: 278 RPFVCEICGQGYKMKKALLVHVG---MHNGINPFTCSFCN-----KSFTQKVGLQKHLPI 329
+ C Q + ++ L+ H+ +H F C + + F + L H+
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 330 HTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHN 389
HTG +P C G
Sbjct: 62 HTGE------------------------------KPHKCTFEG----------------- 74
Query: 390 GINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC--DLCGKRFIHQKSFYIHKM-VHSG 446
C KS+++ L+ HL HTG + C + C K F + H+ HS
Sbjct: 75 ---------CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125
Query: 447 EKPIKCSA--CGLAVLSSSHLKRHFRVHTG 474
EKP C C S L++H + G
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 76.9 bits (190), Expect = 9e-17
Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 45/181 (24%)
Query: 253 ECPTCGKKWRTVSELNAHIQT---HSDLRPFVCEICGQGYKMKK-----ALLVHVGMHNG 304
C +++ + +L HI + H + + FVC G +++ L+VH+ H G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 305 INPFTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSD 362
P C+F C KS+++ L+ HL HTG
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGE----------------------------- 95
Query: 363 LRPFVCE--ICGQGYKMKKALLVHVG-MHNGINPFTCSF--CNKSFTQKVGLQKHLPIHT 417
+P++CE C + + H H+ P+ C C K +T L+KH+
Sbjct: 96 -KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Query: 418 G 418
G
Sbjct: 155 G 155
Score = 63.4 bits (155), Expect = 3e-12
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Query: 87 KKYQCHLCGKGFIHHTSYKFH---QLVHSGERNVKCDICGLALTTK-----SHLNRHMLV 138
+ C + F H + +H + C G + + L HM
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 139 HTGDRPHECSV--CGKRFAKKWNAQVHK 164
HTG++PH+C+ C K +++ N + H
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTHL 89
Score = 51.4 bits (124), Expect = 5e-08
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 242 TGERACMPLIHECPT--CGKKWRTVSELNAHIQTHSDLRPFVCE--ICGQGYKMKKALLV 297
TGE+ P H+C C K + + L H+++H+ +P++CE C + +
Sbjct: 63 TGEK---P--HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAK 117
Query: 298 HVG-MHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTG 332
H H+ P+ C C K +T L+KH+ G
Sbjct: 118 HQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 41.8 bits (99), Expect = 1e-04
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 8/59 (13%)
Query: 114 ERNVKCDICGLALTTKSHLNRHML---VHTGDRPHECSVCG-----KRFAKKWNAQVHK 164
E + + D C ++ L H+ +H + C G + F ++ VH
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM 59
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 92.1 bits (230), Expect = 7e-23
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 393 PFTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPI 450
P+ C C++ F+Q L +H+ IHTG FQC +C + F H H+GEKP
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 451 KCSACGLAVLSSSHLKRHFRVHTGEK 476
C CG S KRH ++H +K
Sbjct: 64 ACDICGRKFARSDERKRHTKIHLRQK 89
Score = 81.4 bits (202), Expect = 4e-19
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 60 PFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNV 117
P+ C C++ F+Q L +H+ IH G K +QC +C + F H H+GE+
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 118 KCDICGLALTTKSHLNRHMLVHTG 141
CDICG RH +H
Sbjct: 64 ACDICGRKFARSDERKRHTKIHLR 87
Score = 79.0 bits (196), Expect = 2e-18
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 31/117 (26%)
Query: 447 EKPIKCSA--CGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDL 504
E+P C C S L RH R+HTG+KP+QC C + R+ L HI+TH+
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRS-DHLTTHIRTHT-- 58
Query: 505 RPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTK 561
G K PF C C + F + +H IH K
Sbjct: 59 ----------GEK----------------PFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 72.1 bits (178), Expect = 6e-16
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 87 KKYQCHL--CGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRP 144
+ Y C + C + F S H +H+G++ +C IC + HL H+ HTG++P
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 145 HECSVCGKRFAKKWNAQVHKK 165
C +CG++FA+ + H K
Sbjct: 63 FACDICGRKFARSDERKRHTK 83
Score = 67.5 bits (166), Expect = 3e-14
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 31 RPFVCEI--CGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKK 88
RP+ C + C + + +L H+ +H+G PF C C ++F++ L H+ H G K
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 89 YQCHLCGKGFIHHTSYKFHQLVHSGERN 116
+ C +CG+ F K H +H +++
Sbjct: 63 FACDICGRKFARSDERKRHTKIHLRQKD 90
Score = 63.3 bits (155), Expect = 8e-13
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 252 HECPT--CGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFT 309
+ CP C +++ L HI+ H+ +PF C IC + + L H+ H G PF
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 310 CSFCNKSFTQKVGLQKHLPIHTG 332
C C + F + ++H IH
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 61.7 bits (151), Expect = 3e-12
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 5 HECPT--CGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFT 62
+ CP C +++ L HI+ H+ +PF C IC + + L H+ H+G PF
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 63 CHFCNKSFTQKIGLVKHLNIHNGTK 87
C C + F + +H IH K
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQK 89
Score = 61.3 bits (150), Expect = 5e-12
Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 32/114 (28%)
Query: 307 PFTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLR 364
P+ C C++ F+Q L +H+ IHTG +
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQ------------------------------K 33
Query: 365 PFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
PF C IC + + L H+ H G PF C C + F + ++H IH
Sbjct: 34 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 87
Score = 43.2 bits (103), Expect = 9e-06
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 31/92 (33%)
Query: 475 EKPYQCTT--CGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGI 532
E+PY C C +R ++ L HI+ H+ G K
Sbjct: 2 ERPYACPVESCDRRFSQS-GSLTRHIRIHT------------GQK--------------- 33
Query: 533 HPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
PF C C ++F++ L H+ H G K +
Sbjct: 34 -PFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 89.9 bits (224), Expect = 4e-22
Identities = 37/90 (41%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 416 HTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGE 475
+GS+ C++CGK F HK+ HSGEKP C CGL + H R H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 476 --KPYQCTTCGKRLRRTVSELNAHIQ-THS 502
KPY C +CGK R LN HI+ HS
Sbjct: 62 VGKPYICQSCGKGFSRP-DHLNGHIKQVHS 90
Score = 89.1 bits (222), Expect = 8e-22
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGE 447
+G + C C K F L +H H+G + C +CG RF + H H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 448 --KPIKCSACGLAVLSSSHLKRHF-RVHTGEK 476
KP C +CG HL H +VH+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 82.9 bits (206), Expect = 1e-19
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 83 HNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTG- 141
+G+ C +CGK F H+L HSGE+ C +CGL K ++ H+ H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 142 -DRPHECSVCGKRFAKKWNAQVHKKKVH 168
+P+ C CGK F++ + H K+VH
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 81.0 bits (201), Expect = 5e-19
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGE 114
SG C C K F L +H H+G K Y C +CG F +H H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 115 RN--VKCDICGLALTTKSHLNRHM-LVHTG 141
C CG + HLN H+ VH+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 74.8 bits (185), Expect = 7e-17
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 472 HTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
+G C CGK R LN H +HS +P+ C +CG +K K + HV H G
Sbjct: 2 SSGSSGVACEICGKIFRDV-YHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60
Query: 532 --IHPFTCHFCNKSFTQKIGLVKHL-NIHNGTK 561
P+ C C K F++ L H+ +H+G
Sbjct: 61 SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 68.7 bits (169), Expect = 1e-14
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 365 PFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTR--F 422
CEICG+ ++ L H H+G P++C C F +K + H+ H GS +
Sbjct: 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66
Query: 423 QCDLCGKRFIHQKSFYIH-KMVHSGEK 448
C CGK F H K VHSG
Sbjct: 67 ICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 68.3 bits (168), Expect = 2e-14
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 32 PFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNG--TKKY 89
CEICG+ ++ L H HSG P++C C F +K + H+ H+G K Y
Sbjct: 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66
Query: 90 QCHLCGKGFIHHTSYKFH-QLVHSGER 115
C CGKGF H + VHSG
Sbjct: 67 ICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 61.0 bits (149), Expect = 7e-12
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNG--INPFT 309
C CGK +R V LN H +HS +P+ C +CG +K K + HV H+G P+
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 310 CSFCNKSFTQKVGLQKHL-PIHTG 332
C C K F++ L H+ +H+G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 59.4 bits (145), Expect = 2e-11
Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 33/120 (27%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHS 361
+G + C C K F L +H H+G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGE---------------------------- 33
Query: 362 DLRPFVCEICGQGYKMKKALLVHVGMHNG--INPFTCSFCNKSFTQKVGLQKHL-PIHTG 418
+P+ C +CG +K K + HV H+G P+ C C K F++ L H+ +H+G
Sbjct: 34 --KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 58.7 bits (143), Expect = 4e-11
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG--IHPFT 62
C CGK +R V LN H +HS +P+ C +CG +K K + HV H G P+
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 63 CHFCNKSFTQKIGLVKHL-NIHNGTK 87
C C K F++ L H+ +H+G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG C C K F L +H H+G K Y
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYS 37
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 86.7 bits (216), Expect = 4e-21
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 422 FQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
F C +CGK F + H ++HS +P C CG S +K+H +HTGEKP++C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 482 TCGKRLRRTVSELNAHIQTH 501
CGK ++ S L H + H
Sbjct: 62 VCGKAFSQS-SNLITHSRKH 80
Score = 82.9 bits (206), Expect = 8e-20
Identities = 36/81 (44%), Positives = 44/81 (54%)
Query: 394 FTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
F C C KSF + L HL IH+ + + C CGKRF + H +H+GEKP KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 454 ACGLAVLSSSHLKRHFRVHTG 474
CG A SS+L H R HTG
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 80.5 bits (200), Expect = 5e-19
Identities = 34/81 (41%), Positives = 44/81 (54%)
Query: 61 FTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCD 120
F C C KSF + L HL IH+ T+ Y C CGK F + K H +H+GE+ KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 121 ICGLALTTKSHLNRHMLVHTG 141
+CG A + S+L H HTG
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 77.8 bits (193), Expect = 5e-18
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 89 YQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+ C +CGK F ++ H L+HS R C CG KS + +H +HTG++PH+C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 149 VCGKRFAKKWNAQVHKK 165
VCGK F++ N H +
Sbjct: 62 VCGKAFSQSSNLITHSR 78
Score = 70.5 bits (174), Expect = 2e-15
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 29/109 (26%)
Query: 451 KCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
C CG + SS L H +H+ +PY C CGKR + S++ H H+ +P C+
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQK-SDMKKHTFIHTGEKPHKCQ 61
Query: 511 ICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNG 559
+CG K+F+Q L+ H H G
Sbjct: 62 VCG----------------------------KAFSQSSNLITHSRKHTG 82
Score = 67.1 bits (165), Expect = 3e-14
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 33 FVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCH 92
F C+ICG+ +K L H+ +HS P+ C +C K F QK + KH IH G K ++C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 93 LCGKGFIHHTSYKFHQLVHSG 113
+CGK F ++ H H+G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 61.3 bits (150), Expect = 3e-12
Identities = 30/80 (37%), Positives = 43/80 (53%)
Query: 253 ECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSF 312
+C CGK ++ S L+ H+ HSD RP+ C+ CG+ + K + H +H G P C
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 313 CNKSFTQKVGLQKHLPIHTG 332
C K+F+Q L H HTG
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 60.1 bits (147), Expect = 9e-12
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 6 ECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHF 65
+C CGK ++ S L+ H+ HSD RP+ C+ CG+ + K + H +H+G P C
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 66 CNKSFTQKIGLVKHLNIHNG 85
C K+F+Q L+ H H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 55.1 bits (134), Expect = 4e-10
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 30/111 (27%)
Query: 308 FTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFV 367
F C C KSF + L HL IH+ + RP+
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDT------------------------------RPYP 31
Query: 368 CEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
C+ CG+ + K + H +H G P C C K+F+Q L H HTG
Sbjct: 32 CQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 45.5 bits (109), Expect = 1e-06
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 507 FVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
F C+ICG+ +K L H+ +HS P+ C +C K F QK + KH IH G K ++
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 84.1 bits (209), Expect = 3e-20
Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 4/81 (4%)
Query: 409 LQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGE----KPIKCSACGLAVLSSSH 464
HTG + C C K F ++ +H + CS CG +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 465 LKRHFRVHTGEKPYQCTTCGK 485
+ RH G + G
Sbjct: 63 MARHADNCAGPDGVEGENSGP 83
Score = 80.6 bits (200), Expect = 6e-19
Identities = 19/83 (22%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Query: 76 LVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNV----KCDICGLALTTKSH 131
H G K Y C C K F H + V C CG T ++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 132 LNRHMLVHTGDRPHECSVCGKRF 154
+ RH G E G
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 75.6 bits (187), Expect = 4e-17
Identities = 20/82 (24%), Positives = 28/82 (34%), Gaps = 5/82 (6%)
Query: 436 SFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGE----KPYQCTTCGKRLRRTV 491
S H+GEKP CS C L HF+ + + C+ CGK R
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR- 60
Query: 492 SELNAHIQTHSDLRPFVCEICG 513
+ + H + E G
Sbjct: 61 NTMARHADNCAGPDGVEGENSG 82
Score = 66.8 bits (164), Expect = 5e-14
Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 25/101 (24%)
Query: 464 HLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALL 523
R HTGEKPY C+ C K R+ L+ H + +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQK-QLLDMHFKRYH--------------------- 39
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+ F C C K+FT++ + +H + G +
Sbjct: 40 ---DPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77
Score = 63.7 bits (156), Expect = 5e-13
Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 20 LNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIH----PFTCHFCNKSFTQKIG 75
+ +TH+ +P+ C C + ++ K+ L +H + + F C C K+FT++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 76 LVKHLNIHNGTKKYQCHLCGKGF 98
+ +H + G + G
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 60.6 bits (148), Expect = 7e-12
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 353 LNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGIN----PFTCSFCNKSFTQKVG 408
+ +TH+ +P+ C C + ++ K+ L +H ++ N F CS C K+FT++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 409 LQKHLPIHTGSTRFQCDLCGKRF 431
+ +H G + + G
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 56.8 bits (138), Expect = 1e-10
Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTG----DRPHECSVCGKRFAKKWNAQV 162
H+GE+ C C K L+ H + CS CGK F ++
Sbjct: 6 SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMAR 65
Query: 163 HKK 165
H
Sbjct: 66 HAD 68
Score = 51.0 bits (123), Expect = 1e-08
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 267 LNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGIN----PFTCSFCNKSFTQKVG 322
+ +TH+ +P+ C C + ++ K+ L +H ++ N F CS C K+FT++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 323 LQKHLPIHTG 332
+ +H G
Sbjct: 63 MARHADNCAG 72
Score = 46.8 bits (112), Expect = 6e-07
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTH----SDLRPFVCEICGQGYKMKKALLV 297
TGE+ P + C C K +R L+ H + + FVC CG+ + + +
Sbjct: 11 TGEK---P--YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMAR 65
Query: 298 HVGMHNGINPFTCSFCNKSF 317
H G + S
Sbjct: 66 HADNCAGPDGVEGENSGPSS 85
Score = 41.7 bits (99), Expect = 2e-05
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 131 HLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVHG 169
HTG++P+ CS C K F +K +H K+ H
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 40
Score = 29.8 bits (68), Expect = 0.48
Identities = 7/35 (20%), Positives = 11/35 (31%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICG 39
C CGK + + + H + E G
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG 82
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 83.3 bits (207), Expect = 5e-20
Identities = 29/74 (39%), Positives = 35/74 (47%)
Query: 405 QKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSH 464
+ R++CD CGK F H H+ H+GEKP KC CG A + SH
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 465 LKRHFRVHTGEKPY 478
L H RVHTG P
Sbjct: 62 LIGHHRVHTGSGPS 75
Score = 71.7 bits (177), Expect = 6e-16
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 433 HQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVS 492
S + + KC CG + SS L +H R HTGEKPY+C CGK + S
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQR-S 60
Query: 493 ELNAHIQTH 501
L H + H
Sbjct: 61 HLIGHHRVH 69
Score = 71.3 bits (176), Expect = 7e-16
Identities = 26/75 (34%), Positives = 35/75 (46%)
Query: 72 QKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSH 131
+ ++Y+C CGK F H + H+ H+GE+ KCD CG A +SH
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 132 LNRHMLVHTGDRPHE 146
L H VHTG P
Sbjct: 62 LIGHHRVHTGSGPSS 76
Score = 64.4 bits (158), Expect = 2e-13
Identities = 23/71 (32%), Positives = 29/71 (40%)
Query: 381 LLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIH 440
+ C C KSF+ L KH HTG ++CD CGK FI + H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 441 KMVHSGEKPIK 451
VH+G P
Sbjct: 66 HRVHTGSGPSS 76
Score = 63.2 bits (155), Expect = 6e-13
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 29/103 (28%)
Query: 461 SSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKK 520
SS R + Y+C CGK + S+L+ H +TH+ +P+ C+ CG
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHS-SDLSKHRRTHTGEKPYKCDECG------- 53
Query: 521 ALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
K+F Q+ L+ H +H G+
Sbjct: 54 ---------------------KAFIQRSHLIGHHRVHTGSGPS 75
Score = 62.8 bits (154), Expect = 8e-13
Identities = 22/68 (32%), Positives = 27/68 (39%)
Query: 48 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFH 107
+ C C KSF+ L KH H G K Y+C CGK FI + H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 108 QLVHSGER 115
VH+G
Sbjct: 66 HRVHTGSG 73
Score = 59.8 bits (146), Expect = 9e-12
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 100 HHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWN 159
S + R KCD CG + + S L++H HTG++P++C CGK F ++ +
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 160 AQVHK 164
H
Sbjct: 62 LIGHH 66
Score = 50.5 bits (122), Expect = 2e-08
Identities = 18/72 (25%), Positives = 30/72 (41%)
Query: 18 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLV 77
+ R + C+ CG+ + L H H+G P+ C C K+F Q+ L+
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 78 KHLNIHNGTKKY 89
H +H G+
Sbjct: 64 GHHRVHTGSGPS 75
Score = 50.1 bits (121), Expect = 3e-08
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 265 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 324
+ R + C+ CG+ + L H H G P+ C C K+F Q+ L
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 325 KHLPIHTG 332
H +HTG
Sbjct: 64 GHHRVHTG 71
Score = 50.1 bits (121), Expect = 3e-08
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 351 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 410
+ R + C+ CG+ + L H H G P+ C C K+F Q+ L
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 411 KHLPIHTG 418
H +HTG
Sbjct: 64 GHHRVHTG 71
Score = 37.4 bits (88), Expect = 7e-04
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 522 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+ C C KSF+ L KH H G K Y+
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYK 48
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 81.7 bits (203), Expect = 2e-19
Identities = 27/71 (38%), Positives = 33/71 (46%)
Query: 408 GLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKR 467
G IH+G + C CGK F H+ VH+GEKP KC CG A +S L
Sbjct: 1 GSSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 468 HFRVHTGEKPY 478
H R+HT
Sbjct: 61 HQRIHTSGPSS 71
Score = 73.7 bits (182), Expect = 1e-16
Identities = 27/71 (38%), Positives = 33/71 (46%)
Query: 75 GLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNR 134
G IH+G K Y C CGK F + HQ VH+GE+ KC CG A + S L
Sbjct: 1 GSSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 135 HMLVHTGDRPH 145
H +HT
Sbjct: 61 HQRIHTSGPSS 71
Score = 73.3 bits (181), Expect = 2e-16
Identities = 31/68 (45%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQ 499
+HSGEKP C CG A SS L +H RVHTGEKPY+C CGK + S L H +
Sbjct: 5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN-SGLINHQR 63
Query: 500 THSDLRPF 507
H+
Sbjct: 64 IHTSGPSS 71
Score = 64.8 bits (159), Expect = 1e-13
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 48 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFH 107
G+HSG P+ C C K+F++ LV+H +H G K Y+C CGK F ++ H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 108 QLVHSGER 115
Q +H+
Sbjct: 62 QRIHTSGP 69
Score = 62.9 bits (154), Expect = 7e-13
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 381 LLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIH 440
G+H+G P+ C C K+F++ L +H +HTG ++C CGK F H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 441 KMVHSGEKP 449
+ +H+
Sbjct: 62 QRIHTSGPS 70
Score = 60.6 bits (148), Expect = 5e-12
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 29/99 (29%)
Query: 465 LKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLV 524
+H+GEKPY C CGK R+ S L H + H+ +P+ C CG
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRS-SILVQHQRVHTGEKPYKCLECG----------- 49
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
K+F+Q GL+ H IH
Sbjct: 50 -----------------KAFSQNSGLINHQRIHTSGPSS 71
Score = 59.8 bits (146), Expect = 9e-12
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+HSGE+ C CG A + S L +H VHTG++P++C CGK F++ H++
Sbjct: 5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63
Score = 50.9 bits (123), Expect = 1e-08
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 20 LNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKH 79
+ HS +P+ C CG+ + L+ H +H+G P+ C C K+F+Q GL+ H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 80 LNIHNGTKKY 89
IH
Sbjct: 62 QRIHTSGPSS 71
Score = 49.0 bits (118), Expect = 5e-08
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 267 LNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKH 326
+ HS +P+ C CG+ + L+ H +H G P+ C C K+F+Q GL H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 327 LPIHTG 332
IHT
Sbjct: 62 QRIHTS 67
Score = 49.0 bits (118), Expect = 5e-08
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 353 LNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKH 412
+ HS +P+ C CG+ + L+ H +H G P+ C C K+F+Q GL H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 413 LPIHTG 418
IHT
Sbjct: 62 QRIHTS 67
Score = 39.4 bits (93), Expect = 1e-04
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 522 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
G+HSG P+ C C K+F++ LV+H +H G K Y+
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYK 44
Score = 35.5 bits (83), Expect = 0.003
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 132 LNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+ +H+G++P+ C CGK F++ H++
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQR 35
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 82.2 bits (204), Expect = 2e-19
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 393 PFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKC 452
PF C C ++F++ L H+ HTG F CD+CG++F H+ + PI
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILE 61
Query: 453 SACGLAVLSSSHLKRH---FRVHTGEK 476
+ + HL+ + GE+
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVGER 88
Score = 74.5 bits (184), Expect = 8e-17
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 448 KPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPF 507
KP +C C S HL H R HTGEKP+ C CG++ R+ E H P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARS-DERKRHRDIQHI-LPI 59
Query: 508 VCEICGQGYKMKKALLVHVGMHSGIH 533
+ + + L V
Sbjct: 60 LEDKVEELLSKNYHLENEVA-RLKKL 84
Score = 71.0 bits (175), Expect = 1e-15
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 60 PFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
PF C C ++F++ L H+ H G K + C +CG+ F K H+ + +
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILE 61
Query: 120 DICGLALTTKSHLNRHML---VHTGDR 143
D L+ HL + G+R
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVGER 88
Score = 69.8 bits (172), Expect = 4e-15
Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 87 KKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHE 146
K +QC +C + F H H+GE+ CDICG RH + P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPIL 60
Query: 147 CSVCGKRFAKKWNAQVHKK 165
+ +K ++ +
Sbjct: 61 EDKVEELLSKNYHLENEVA 79
Score = 61.0 bits (149), Expect = 5e-12
Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 30 LRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 89
++PF C IC + + L H+ H+G PF C C + F + +H +I +
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPI 59
Query: 90 QCHLCGKGFIHHTSYKFHQL---VHSGER 115
+ + + GER
Sbjct: 60 LEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 55.2 bits (134), Expect = 5e-10
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+C C + + L HI+TH+ +PF C+ICG+ + H + I P
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILED 62
Query: 312 FCNKSFTQKVGLQKHLP---IHTG 332
+ ++ L+ + G
Sbjct: 63 KVEELLSKNYHLENEVARLKKLVG 86
Score = 44.4 bits (106), Expect = 3e-06
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 277 LRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHT 331
++PF C IC + + L H+ H G PF C C + F + ++H I
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55
Score = 42.5 bits (101), Expect = 2e-05
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 504 LRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIH 557
++PF C IC + + L H+ H+G PF C C + F + +H +I
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54
Score = 33.2 bits (77), Expect = 0.029
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 534 PFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
PF C C ++F++ L H+ H G K +
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 33
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 82.2 bits (204), Expect = 2e-19
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 416 HTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS--ACGLAVLSSSHLKRHFRVHT 473
T + CGK + H H+GEKP C CG S L RH+R HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 474 GEKPYQCTTCGKRLRRTVSELNAHIQTH 501
G +P+QC C + R+ L H++ H
Sbjct: 62 GHRPFQCQKCDRAFSRS-DHLALHMKRH 88
Score = 76.4 bits (189), Expect = 2e-17
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 31/116 (26%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT--TCGKRLRRTVSELNAHIQTH 501
+ + CG SSHLK H R HTGEKPY C CG + R+ EL H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARS-DELTRHYRKH 60
Query: 502 SDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIH 557
+ G PF C C+++F++ L H+ H
Sbjct: 61 T----------------------------GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 70.6 bits (174), Expect = 2e-15
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 83 HNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDI--CGLALTTKSHLNRHMLVHT 140
T CGK + + K H H+GE+ CD CG L RH HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 141 GDRPHECSVCGKRFAKKWNAQVHKK 165
G RP +C C + F++ + +H K
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMK 86
Score = 70.3 bits (173), Expect = 3e-15
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHL--CGKGFIHHTSYKFHQLVHS 112
+ H C K++T+ L HL H G K Y C CG F H H+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 113 GERNVKCDICGLALTTKSHLNRHMLVH 139
G R +C C A + HL HM H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 59.5 bits (145), Expect = 2e-11
Identities = 23/87 (26%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 360 HSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS--FCNKSFTQKVGLQKHLPIHT 417
+ CG+ Y L H+ H G P+ C C F + L +H HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 418 GSTRFQCDLCGKRFIHQKSFYIHKMVH 444
G FQC C + F +H H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 58.3 bits (142), Expect = 5e-11
Identities = 23/108 (21%), Positives = 35/108 (32%), Gaps = 26/108 (24%)
Query: 4 IHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ CGK + S L AH++TH+ +P+ C
Sbjct: 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHC--------------------------DW 40
Query: 64 HFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVH 111
C F + L +H H G + +QC C + F H H
Sbjct: 41 DGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 57.5 bits (140), Expect = 1e-10
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC--EICGQGYKMKKALLVHV 299
T C + CGK + S L AH++TH+ +P+ C + CG + L H
Sbjct: 3 TATHTC-----DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 300 GMHNGINPFTCSFCNKSFTQKVGLQKHLPIH 330
H G PF C C+++F++ L H+ H
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 50.6 bits (122), Expect = 2e-08
Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 27/93 (29%)
Query: 472 HTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
T CGK ++ S L AH++TH+ +P+ C
Sbjct: 2 RTATHTCDYAGCGKTYTKS-SHLKAHLRTHTGEKPYHC---------------------- 38
Query: 532 IHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
C F + L +H H G + +Q
Sbjct: 39 ----DWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Score = 41.7 bits (99), Expect = 3e-05
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 274 HSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS--FCNKSFTQKVGLQKHLPIHT 331
+ CG+ Y L H+ H G P+ C C F + L +H HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 332 GSTRFQ 337
G FQ
Sbjct: 62 GHRPFQ 67
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 81.8 bits (203), Expect = 2e-19
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 416 HTGSTRFQCDL--CGKRFIHQKSFYIHK-MVHSGEKPIKCS--ACGLAVLSSSHLKRHFR 470
+GS+ CD CG+ F +++ HK H +K C ACG + HLK H +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 471 VHTGEKPYQCTTCGK 485
+H+ + Y C G
Sbjct: 62 LHSDTRDYICEFSGP 76
Score = 73.7 bits (182), Expect = 1e-16
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 83 HNGTKKYQCHL--CGKGFIHHTSYKFHQ-LVHSGERNVKCD--ICGLALTTKSHLNRHML 137
+G+ C CG+ F + H+ H +++ C CG + K HL HM
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 138 VHTGDRPHECSVCGKRF 154
+H+ R + C G
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 63.7 bits (156), Expect = 4e-13
Identities = 23/106 (21%), Positives = 33/106 (31%), Gaps = 34/106 (32%)
Query: 444 HSGEKPIKCSA--CGLAVLSSSHLKRHFRV-HTGEKPYQCT--TCGKRLRRTVSELNAHI 498
SG + C CG + +L H + H +K + C CGK L H+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFK-KHLKEHM 60
Query: 499 QTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSF 544
+ HSD R ++CE F S
Sbjct: 61 KLHSDTRDYICE----------------------------FSGPSS 78
Score = 57.6 bits (140), Expect = 7e-11
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 31 RPFVCEI--CGQGYKMKKALLVHV-GMHSGIHPFTCHF--CNKSFTQKIGLVKHLNIHNG 85
C+ CG+ + ++ L H H F+C C KSF K L +H+ +H+
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Query: 86 TKKYQCHLCGKGF 98
T+ Y C G
Sbjct: 66 TRDYICEFSGPSS 78
Score = 56.0 bits (136), Expect = 2e-10
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 364 RPFVCEI--CGQGYKMKKALLVHV-GMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTG 418
C+ CG+ + ++ L H H F+C C KSF K L++H+ +H+
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Query: 419 STRFQCDLCGKRF 431
+ + C+ G
Sbjct: 66 TRDYICEFSGPSS 78
Score = 52.6 bits (127), Expect = 4e-09
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 111 HSGERNVKCDI--CGLALTTKSHLNRHM-LVHTGDRPHECS--VCGKRFAKKWNAQVHKK 165
SG + CD CG + + +LN H H + C CGK F K + + H K
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Score = 48.3 bits (116), Expect = 1e-07
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHI-QTHSDLRPFVCE--ICGQGYKMKKALLVH 298
+G + + P CG+ + LN H H + F C CG+ + KK L H
Sbjct: 3 SGSS---GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH 59
Query: 299 VGMHNGINPFTCSFCNKSF 317
+ +H+ + C F S
Sbjct: 60 MKLHSDTRDYICEFSGPSS 78
Score = 46.4 bits (111), Expect = 6e-07
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 302 HNGINPFTCSF--CNKSFTQKVGLQKHLPI-HTGSTRFQWEQSHLNYVWRTVSELNAHIQ 358
+G + C F C + F+ + L H H F + + L H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 359 THSDLRPFVCEICG 372
HSD R ++CE G
Sbjct: 62 LHSDTRDYICEFSG 75
Score = 44.1 bits (105), Expect = 4e-06
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 278 RPFVCEI--CGQGYKMKKALLVHV-GMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTG 332
C+ CG+ + ++ L H H F+C C KSF K L++H+ +H+
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Score = 34.8 bits (81), Expect = 0.007
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 8 PTCGKKWRTVSELNAHIQTHSDLRPFVCEICG 39
P CGK + L H++ HSD R ++CE G
Sbjct: 44 PACGKSFNFKKHLKEHMKLHSDTRDYICEFSG 75
Score = 34.4 bits (80), Expect = 0.009
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 139 HTGDRPHECSV--CGKRFAKKWNAQVHKKKVH 168
+G C CG+ F+ + HKK H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH 33
Score = 29.8 bits (68), Expect = 0.43
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 529 HSGIHPFTCHF--CNKSFTQKIGLVKHLNI-HNGTKKYQ 564
SG C F C + F+ + L H H K +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFS 40
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 80.6 bits (200), Expect = 4e-19
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 409 LQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRH 468
H + ++CD C F ++ + HK VH+GEKP +C+ CG ++LK H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 469 FRVHTGEKPY 478
R+H+GEKPY
Sbjct: 65 TRIHSGEKPY 74
Score = 72.1 bits (178), Expect = 4e-16
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHI 498
H + +KP KC C + +L H VHTGEKPY+C CG + R + L H
Sbjct: 7 HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRP-ANLKTHT 65
Query: 499 QTH 501
+ H
Sbjct: 66 RIH 68
Score = 69.0 bits (170), Expect = 5e-15
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 76 LVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRH 135
H ++ + K Y+C C F + + H+ VH+GE+ +C+ICG ++L H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 136 MLVHTGDRPH 145
+H+G++P+
Sbjct: 65 TRIHSGEKPY 74
Score = 66.3 bits (163), Expect = 4e-14
Identities = 24/102 (23%), Positives = 33/102 (32%), Gaps = 29/102 (28%)
Query: 462 SSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKA 521
H H + +KPY+C C R L +H H+ +P+ C ICG
Sbjct: 2 GHHHHHHSHMTHSDKPYKCDRCQASFRYK-GNLASHKTVHTGEKPYRCNICG-------- 52
Query: 522 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
F + L H IH+G K Y
Sbjct: 53 --------------------AQFNRPANLKTHTRIHSGEKPY 74
Score = 62.9 bits (154), Expect = 7e-13
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 381 LLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIH 440
H M + P+ C C SF K L H +HTG ++C++CG +F + H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 441 KMVHSGEKP 449
+HSGEKP
Sbjct: 65 TRIHSGEKP 73
Score = 62.5 bits (153), Expect = 9e-13
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
H + ++ KCD C + K +L H VHTG++P+ C++CG +F + N + H +
Sbjct: 8 HSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66
Score = 62.1 bits (152), Expect = 1e-12
Identities = 24/68 (35%), Positives = 32/68 (47%)
Query: 48 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFH 107
H M P+ C C SF K L H +H G K Y+C++CG F + K H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 108 QLVHSGER 115
+HSGE+
Sbjct: 65 TRIHSGEK 72
Score = 51.7 bits (125), Expect = 7e-09
Identities = 20/72 (27%), Positives = 32/72 (44%)
Query: 18 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLV 77
+ H +P+ C+ C ++ K L H +H+G P+ C+ C F + L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 78 KHLNIHNGTKKY 89
H IH+G K Y
Sbjct: 63 THTRIHSGEKPY 74
Score = 51.7 bits (125), Expect = 7e-09
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 265 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 324
+ H +P+ C+ C ++ K L H +H G P+ C+ C F + L+
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 325 KHLPIHTG 332
H IH+G
Sbjct: 63 THTRIHSG 70
Score = 51.7 bits (125), Expect = 7e-09
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 351 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 410
+ H +P+ C+ C ++ K L H +H G P+ C+ C F + L+
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 411 KHLPIHTG 418
H IH+G
Sbjct: 63 THTRIHSG 70
Score = 44.8 bits (107), Expect = 2e-06
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 130 SHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
H + H + D+P++C C F K N HK
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKT 38
Score = 35.9 bits (84), Expect = 0.003
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 522 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
H M P+ C C SF K L H +H G K Y+
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYR 47
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 79.2 bits (196), Expect = 2e-18
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 402 SFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS--ACGLAV 459
S + IH C K + H H+GEKP KC+ C
Sbjct: 2 SSGSSGPDLEKRRIHYCD----YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 460 LSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSD 503
S L RH+R HTG KP+QC C + R+ L H++ H +
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRS-DHLALHMKRHQN 100
Score = 68.8 bits (169), Expect = 1e-14
Identities = 37/120 (30%), Positives = 48/120 (40%), Gaps = 35/120 (29%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT--TCGKRLRRTVSELNAH 497
+ +H + P C SSHLK H R HTGEKPY+CT C R R+ EL H
Sbjct: 12 KRRIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS-DELTRH 66
Query: 498 IQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIH 557
+ H+ G PF C CN+SF++ L H+ H
Sbjct: 67 YRKHT----------------------------GAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 67.3 bits (165), Expect = 4e-14
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Query: 69 SFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDI--CGLAL 126
S ++ IH C K + + K H H+GE+ KC C
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 127 TTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
L RH HTG +P +C VC + F++ + +H K
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96
Score = 63.0 bits (154), Expect = 1e-12
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 60 PFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQCHL--CGKGFIHHTSYKFHQLVHSGER 115
C + C K +T+ L HL H G K Y+C C F H H+G +
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK 74
Query: 116 NVKCDICGLALTTKSHLNRHMLVHT 140
+C +C + + HL HM H
Sbjct: 75 PFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 62.6 bits (153), Expect = 2e-12
Identities = 27/114 (23%), Positives = 40/114 (35%), Gaps = 32/114 (28%)
Query: 364 RPFVCEI--CGQGYKMKKALLVHVGMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTGS 419
R C+ C + Y L H+ H G P+ C++ C+ F + L +H HTG+
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73
Query: 420 TRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHT 473
FQC +C + F S HL H + H
Sbjct: 74 KPFQCGVCNRSFSR----------------------------SDHLALHMKRHQ 99
Score = 58.4 bits (142), Expect = 6e-11
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 251 IHEC--PTCGKKWRTVSELNAHIQTHSDLRPFVC--EICGQGYKMKKALLVHVGMHNGIN 306
IH C P C K + S L AH++TH+ +P+ C E C + L H H G
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK 74
Query: 307 PFTCSFCNKSFTQKVGLQKHLPIHT 331
PF C CN+SF++ L H+ H
Sbjct: 75 PFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 57.3 bits (139), Expect = 1e-10
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 31 RPFVCEI--CGQGYKMKKALLVHVGMHSGIHPFTCHF--CNKSFTQKIGLVKHLNIHNGT 86
R C+ C + Y L H+ H+G P+ C + C+ F + L +H H G
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73
Query: 87 KKYQCHLCGKGFIHHTSYKFHQLVH 111
K +QC +C + F H H
Sbjct: 74 KPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 51.5 bits (124), Expect = 1e-08
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 316 SFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFVC--EICGQ 373
S + IH + V+ S L AH++TH+ +P+ C E C
Sbjct: 2 SSGSSGPDLEKRRIHYC------DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55
Query: 374 GYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHT 417
+ L H H G PF C CN+SF++ L H+ H
Sbjct: 56 RFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 42.6 bits (101), Expect = 2e-05
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 278 RPFVCEI--CGQGYKMKKALLVHVGMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTGS 333
R C+ C + Y L H+ H G P+ C++ C+ F + L +H HTG+
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73
Query: 334 TRFQWEQSHLNYVWRTVSELNAHIQTHSD 362
FQ + ++ L H++ H +
Sbjct: 74 KPFQCGVCNRSFSRS--DHLALHMKRHQN 100
Score = 28.0 bits (63), Expect = 2.5
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 534 PFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQ 564
C + C K +T+ L HL H G K Y+
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYK 47
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 72.1 bits (178), Expect = 4e-16
Identities = 13/66 (19%), Positives = 27/66 (40%)
Query: 416 HTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGE 475
+ +C C + + IH+ +H ++P KC+ C S+L +H + G+
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Query: 476 KPYQCT 481
+
Sbjct: 64 MSGPSS 69
Score = 71.8 bits (177), Expect = 6e-16
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 443 VHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTH 501
S P KCS C + S + L+ H R+H ++P++C C ++ S L+ H++
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQP-SNLSKHMKKF 60
Score = 66.0 bits (162), Expect = 5e-14
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 110 VHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVHG 169
S KC C + ++K+ L H +H DRP +C+ C + N H KK HG
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 65.2 bits (160), Expect = 1e-13
Identities = 15/66 (22%), Positives = 26/66 (39%)
Query: 83 HNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGD 142
+ +C C + + H+ +H +R KC+ C S+L++HM GD
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Query: 143 RPHECS 148
S
Sbjct: 64 MSGPSS 69
Score = 61.0 bits (149), Expect = 3e-12
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGE 114
S HP C C+ S + K L H IH + ++C+ C ++ H G+
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Score = 60.6 bits (148), Expect = 4e-12
Identities = 17/95 (17%), Positives = 27/95 (28%), Gaps = 29/95 (30%)
Query: 470 RVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMH 529
+ P +C+ C K AL +H +H
Sbjct: 2 SSGSSGHPEKCSECSYSCSS-----------------------------KAALRIHERIH 32
Query: 530 SGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
PF C++C+ Q L KH+ +G
Sbjct: 33 CTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP 67
Score = 54.8 bits (133), Expect = 5e-10
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 273 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+ S P C C K AL +H +H PF C++C+ Q L KH+ G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 54.8 bits (133), Expect = 5e-10
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 359 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
+ S P C C K AL +H +H PF C++C+ Q L KH+ G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 54.4 bits (132), Expect = 6e-10
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 26 THSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNG 85
+ S P C C K AL +H +H PF C++C+ Q L KH+ +G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 86 TKKYQC 91
Sbjct: 63 DMSGPS 68
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 68.7 bits (169), Expect = 8e-15
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGE--KPYQCTTCGKRLRRTVSELNA 496
HSGEKP +C C S +K H E + C C + R S+L
Sbjct: 5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK-SDLGV 63
Query: 497 HIQTH 501
H++
Sbjct: 64 HLRKQ 68
Score = 68.3 bits (168), Expect = 1e-14
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 105 KFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTG--DRPHECSVCGKRFAKKWNAQV 162
HSGE+ +C IC T + H+L C C A+K + V
Sbjct: 4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGV 63
Query: 163 HKKKVH 168
H +K H
Sbjct: 64 HLRKQH 69
Score = 67.9 bits (167), Expect = 1e-14
Identities = 20/101 (19%), Positives = 30/101 (29%), Gaps = 28/101 (27%)
Query: 464 HLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALL 523
R H+GEKPY+C C R ++ + HI +
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQS-GTMKMHILQKH----------TENVA------ 44
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHL-NIHNGTKKY 563
F C C+ +K L HL H+ +
Sbjct: 45 ----------KFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 66.0 bits (162), Expect = 6e-14
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 76 LVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERN--VKCDICGLALTTKSHLN 133
H+G K Y+C++C F + K H L E C C + KS L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 134 RHM-LVHTGDRPH 145
H+ H+ P
Sbjct: 63 VHLRKQHSYSGPS 75
Score = 66.0 bits (162), Expect = 7e-14
Identities = 18/101 (17%), Positives = 25/101 (24%), Gaps = 31/101 (30%)
Query: 381 LLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTR--FQCDLCGKRFIHQKSFY 438
H+G P+ C C+ FTQ ++ H+ F C C
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIAR----- 57
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFR-VHTGEKPY 478
S L H R H+ P
Sbjct: 58 -----------------------KSDLGVHLRKQHSYSGPS 75
Score = 61.4 bits (150), Expect = 2e-12
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 48 LLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNG--TKKYQCHLCGKGFIHHTSYK 105
HSG P+ C+ C+ FTQ + H+ + K+ C C +
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 106 FHQ-LVHSGER 115
H HS
Sbjct: 63 VHLRKQHSYSG 73
Score = 53.7 bits (130), Expect = 2e-09
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 267 LNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNG--INPFTCSFCNKSFTQKVGLQ 324
+ +THS +P+ C IC + + +H+ + + F C C+ +K L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 325 KHL-PIHTG 332
HL H+
Sbjct: 63 VHLRKQHSY 71
Score = 47.1 bits (113), Expect = 3e-07
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 131 HLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVHG 169
H+G++P+EC +C RF + ++H + H
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 40
Score = 43.3 bits (103), Expect = 7e-06
Identities = 17/125 (13%), Positives = 25/125 (20%), Gaps = 57/125 (45%)
Query: 295 LLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELN 354
H+G P+ C C+ FTQ ++ H+
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENV------------------- 43
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHL- 413
F C C +K L HL
Sbjct: 44 ---------AKFHCPHCD----------------------------TVIARKSDLGVHLR 66
Query: 414 PIHTG 418
H+
Sbjct: 67 KQHSY 71
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 68.0 bits (167), Expect = 1e-14
Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Query: 441 KMVHSGEKPIKCSACGLAVLSSSHLKRHFRV--HTGEKPYQCTTCGKRLRRTVSELNAHI 498
+ GE +C C S+ RH+ K Y C C K R + AH+
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRK-DNMTAHV 60
Query: 499 QTHSDL 504
+ +
Sbjct: 61 KIIHKI 66
Score = 63.0 bits (154), Expect = 6e-13
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 108 QLVHSGERNVKCDICGLALTTKSHLNRHMLV--HTGDRPHECSVCGKRFAKKWNAQVHKK 165
+ GE +C +C T S+ RH + + + C C K F +K N H K
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Query: 166 KVHGL 170
+H +
Sbjct: 62 IIHKI 66
Score = 61.8 bits (151), Expect = 1e-12
Identities = 17/90 (18%), Positives = 25/90 (27%), Gaps = 27/90 (30%)
Query: 470 RVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMH 529
GE Y+C C + S H T
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHI-SNFCRHYVTSH--------------------------K 35
Query: 530 SGIHPFTCHFCNKSFTQKIGLVKHLNIHNG 559
+ + C FC K FT+K + H+ I +
Sbjct: 36 RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 52.2 bits (126), Expect = 3e-09
Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHL--NIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHS 112
G H + C C++ +T +H + K Y C C K F + H +
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Query: 113 G 113
Sbjct: 65 K 65
Score = 51.8 bits (125), Expect = 5e-09
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 26 THSDLRPFVCEICGQGYKMKKALLVH--VGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIH 83
T + C++C + Y H + + C FC K FT+K + H+ I
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 84 NG 85
+
Sbjct: 64 HK 65
Score = 50.6 bits (122), Expect = 1e-08
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 273 THSDLRPFVCEICGQGYKMKKALLVH--VGMHNGINPFTCSFCNKSFTQKVGLQKHLPIH 330
T + C++C + Y H + + C FC K FT+K + H+ I
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 331 TG 332
Sbjct: 64 HK 65
Score = 50.6 bits (122), Expect = 1e-08
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 359 THSDLRPFVCEICGQGYKMKKALLVH--VGMHNGINPFTCSFCNKSFTQKVGLQKHLPIH 416
T + C++C + Y H + + C FC K FT+K + H+ I
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 417 TG 418
Sbjct: 64 HK 65
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQT--HSDLRPFVCEICGQGYKMKKALLVHV 299
GE + C C + + +S H T +++ + C C + + K + HV
Sbjct: 6 EGEH-----TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60
Query: 300 GMHNGI 305
+ + I
Sbjct: 61 KIIHKI 66
Score = 39.5 bits (93), Expect = 1e-04
Identities = 11/90 (12%), Positives = 26/90 (28%), Gaps = 28/90 (31%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHS 361
G + + C C++ +T +H
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHY----------------------------VTSHKR 36
Query: 362 DLRPFVCEICGQGYKMKKALLVHVGMHNGI 391
+++ + C C + + K + HV + + I
Sbjct: 37 NVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 5 HECPTCGKKWRTVSELNAHIQT--HSDLRPFVCEICGQGYKMKKALLVHVGMHSGI 58
+ C C + + +S H T +++ + C C + + K + HV + I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 33.7 bits (78), Expect = 0.014
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHL--NIHNGTKKYQ 564
G H + C C++ +T +H + K Y
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYP 42
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 68.4 bits (168), Expect = 1e-14
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 427 CGKRFIHQKSFYIHKMVHSGEKPIKCS--ACGLAVLSSSHLKRHFRVHTGEKPYQCTTCG 484
CGK F +H+ H+ + P +C C S LKRH +VH G + +C
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 485 KRLRRTVSELNAHIQTH 501
+ L + H
Sbjct: 69 FVGKTWTLYLKHVAECH 85
Score = 63.8 bits (156), Expect = 4e-13
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 452 CSACGLAVLSSSHLKRHFRVHTGEKPYQCT--TCGKRLRRTVSELNAHIQTHSDLRPFVC 509
CG A + LK H HT + PY+C C KR S L H + H+
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP-SRLKRHEKVHAGYPCKKD 64
Query: 510 EICGQGYKMKKALLVHV 526
+ C K L HV
Sbjct: 65 DSCSFVGKTWTLYLKHV 81
Score = 61.9 bits (151), Expect = 2e-12
Identities = 24/84 (28%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 89 YQCHL--CGKGFIHHTSYKFHQLVHSGERNVKCD--ICGLALTTKSHLNRHMLVHTGDRP 144
Y CH CGK F H K HQ H+ + +C C + S L RH VH G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 145 HECSVCGKRFAKKWNAQVHKKKVH 168
+ C H + H
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 59.2 bits (144), Expect = 2e-11
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 61 FTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQCH--LCGKGFIHHTSYKFHQLVHSGERN 116
+ CHF C K+F + L H H Y+C C K F + K H+ VH+G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 117 VKCDICGLALTTKSHLNRHM 136
K D C T + +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHV 81
Score = 48.0 bits (115), Expect = 2e-07
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 368 CEICGQGYKMKKALLVHVGMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQCD 425
E CG+ +K L VH H P+ C C+K F+ L++H +H G + D
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65
Query: 426 LCGKRF 431
C
Sbjct: 66 SCSFVG 71
Score = 45.7 bits (109), Expect = 1e-06
Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 28/107 (26%)
Query: 4 IHEC--PTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPF 61
++ C CGK ++ ++L H +H+ P+ C G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG---------------------- 38
Query: 62 TCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQ 108
C+K F+ L +H +H G + C T Y H
Sbjct: 39 ----CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 81
Score = 44.1 bits (105), Expect = 4e-06
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 251 IHEC--PTCGKKWRTVSELNAHIQTHSDLRPFVC--EICGQGYKMKKALLVHVGMHNGIN 306
++ C CGK ++ ++L H +H+ P+ C E C + + + L H +H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 307 PFTCSFCNKSFTQKVGLQKH 326
C+ KH
Sbjct: 61 CKKDDSCSFVGKTWTLYLKH 80
Score = 39.5 bits (93), Expect = 2e-04
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Query: 308 FTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRP 365
+ C F C K+F + L+ H HT ++ + + S L H + H+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 366 FVCEICGQGYKMKKALLVHV 385
+ C K L HV
Sbjct: 62 KKDDSCSFVGKTWTLYLKHV 81
Score = 36.4 bits (85), Expect = 0.002
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 509 CEICGQGYKMKKALLVHVGMHSGIHPFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQ 564
E CG+ +K L VH H+ P+ C C+K F+ L +H +H G +
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 63
Score = 32.2 bits (74), Expect = 0.067
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 7/60 (11%)
Query: 242 TGERACMPLIHEC--PTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHV 299
T + +EC C K++ S L H + H+ + C K L HV
Sbjct: 27 TQQL-----PYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 81
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 67.2 bits (165), Expect = 1e-14
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHF-RVHTGEKPYQCTTCGK 485
S KP C +CG HL H +VHT E+P++C
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49
Score = 57.6 bits (140), Expect = 3e-11
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHM-LVHTGDRPHECSVCGKRFA 155
S + C CG + HLN H+ VHT +RPH+C V +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 52.2 bits (126), Expect = 3e-09
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQ-THSDLRPFVCEICGQGY 516
+ KPY C +CGK R LN HI+ H+ RP C++ G
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRP-DHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 50.7 bits (122), Expect = 1e-08
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHL-NIHNGTKKYQCHLCGKGF 98
S P+ C C K F++ L H+ +H + ++C + G
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 46.0 bits (110), Expect = 4e-07
Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHL-PIHTGSTRFQCDLCGKRF 431
+ P+ C C K F++ L H+ +HT +C +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 39.5 bits (93), Expect = 7e-05
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHV-GMHSGIHPFTCHFCNKSFTQ 72
+ + S +P++C+ CG+G+ L H+ +H+ P C +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 39.5 bits (93), Expect = 7e-05
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 496 AHIQTHSDLRPFVCEICGQGYKMKKALLVHV-GMHSGIHPFTCHFCNKSFTQ 546
+ + S +P++C+ CG+G+ L H+ +H+ P C +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 39.1 bits (92), Expect = 1e-04
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHV-GMHNGINPFTCSFCNKSFTQ 319
+ + S +P++C+ CG+G+ L H+ +H P C +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 39.1 bits (92), Expect = 1e-04
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHV-GMHNGINPFTCSFCNKSFTQ 405
+ + S +P++C+ CG+G+ L H+ +H P C +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 36.8 bits (86), Expect = 7e-04
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 138 VHTGDRPHECSVCGKRFAKKWNAQVHKKKVH 168
+ +P+ C CGK F++ + H K+VH
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36
Score = 35.6 bits (83), Expect = 0.002
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHL-NIHNGTKKYQ 564
S P+ C C K F++ L H+ +H + ++
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK 43
Score = 34.9 bits (81), Expect = 0.003
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHL-PIHTG 332
+ P+ C C K F++ L H+ +HT
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS 38
Score = 34.9 bits (81), Expect = 0.003
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 5 HECPTCGKKWRTVSELNAHIQ-THSDLRPFVCEICGQGY 42
+ C +CGK + LN HI+ H+ RP C++ G
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 34.9 bits (81), Expect = 0.003
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 252 HECPTCGKKWRTVSELNAHIQ-THSDLRPFVCEICGQGY 289
+ C +CGK + LN HI+ H+ RP C++ G
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 67.0 bits (164), Expect = 3e-14
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 111 HSGERNVKCDICGLALTTKSHLNRHMLVHT---GDRPHECSVCGKRFAKKWNAQVHKKKV 167
SG ++C+ICG K+ LN H H C CGKRF K + H+ K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 168 HGLDVPGT 175
H +
Sbjct: 62 HPALLLAP 69
Score = 66.7 bits (163), Expect = 4e-14
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHT---GEKPYQCTTCGKRLRRTVSELNAHIQT 500
SG ++C CG + L H R H + C CGKR + S + AH
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDS-VAAHRSK 60
Query: 501 -HSDLRPFVCEICG 513
H L E G
Sbjct: 61 SHPALLLAPQESSG 74
Score = 64.3 bits (157), Expect = 3e-13
Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHT---GSTRFQCDLCGKRFIHQKSFYIHKMVH 444
+G + C C + QK L H H + RF C+ CGKRF S H+
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 445 SGEKPIKCSAC 455
+
Sbjct: 62 HPALLLAPQES 72
Score = 61.3 bits (149), Expect = 3e-12
Identities = 17/93 (18%), Positives = 27/93 (29%), Gaps = 26/93 (27%)
Query: 472 HTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
+G QC CG R+ + LN H + H++
Sbjct: 2 SSGSSGLQCEICGFTCRQK-ASLNWHQRKHAETV-------------------------A 35
Query: 532 IHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
F C FC K F + + H + +
Sbjct: 36 ALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Score = 61.3 bits (149), Expect = 4e-12
Identities = 16/68 (23%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIH---NGTKKYQCHLCGKGFIHHTSYKFHQLVH 111
SG C C + QK L H H ++ C CGK F S H+
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 112 SGERNVKC 119
+
Sbjct: 62 HPALLLAP 69
Score = 60.1 bits (146), Expect = 9e-12
Identities = 15/77 (19%), Positives = 22/77 (28%), Gaps = 4/77 (5%)
Query: 83 HNGTKKYQCHLCGKGFIHHTSYKFHQLVHS---GERNVKCDICGLALTTKSHLNRHMLV- 138
+G+ QC +CG S +HQ H+ C+ CG + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 139 HTGDRPHECSVCGKRFA 155
H G
Sbjct: 62 HPALLLAPQESSGPSSG 78
Score = 58.2 bits (141), Expect = 4e-11
Identities = 16/69 (23%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Query: 364 RPFVCEICGQGYKMKKALLVHVGMH---NGINPFTCSFCNKSFTQKVGLQKHLPIHTGST 420
CEICG + K +L H H F C FC K F + + H +
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 421 RFQCDLCGK 429
Sbjct: 66 LLAPQESSG 74
Score = 57.4 bits (139), Expect = 8e-11
Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 278 RPFVCEICGQGYKMKKALLVHVGMH---NGINPFTCSFCNKSFTQKVGLQKHLPIHTGST 334
CEICG + K +L H H F C FC K F + + H +
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 335 RFQWEQS 341
++S
Sbjct: 66 LLAPQES 72
Score = 57.0 bits (138), Expect = 9e-11
Identities = 16/69 (23%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Query: 31 RPFVCEICGQGYKMKKALLVHVGMHS---GIHPFTCHFCNKSFTQKIGLVKHLNIHNGTK 87
CEICG + K +L H H+ F C FC K F + + H + +
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 88 KYQCHLCGK 96
Sbjct: 66 LLAPQESSG 74
Score = 27.0 bits (60), Expect = 4.5
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 5 HECPTCGKKWRTVSELNAHIQT-HSDLRPFVCEICG 39
C CGK++ + AH H L E G
Sbjct: 39 FPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 27.0 bits (60), Expect = 4.5
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 252 HECPTCGKKWRTVSELNAHIQT-HSDLRPFVCEICG 286
C CGK++ + AH H L E G
Sbjct: 39 FPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 65.6 bits (161), Expect = 4e-14
Identities = 20/44 (45%), Positives = 23/44 (52%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
GEK KC CG SSHL+ H RVHTGEKP ++
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45
Score = 51.0 bits (123), Expect = 5e-09
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
GE+ KCD+CG + SHL H VHTG++P S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 4e-08
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
G ++CD+CGK F H+ VH+GEKP S+
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45
Score = 44.8 bits (107), Expect = 8e-07
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
GEK Y+C CGK ++ S L H + H+ +P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQS-SHLQTHQRVHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 5e-06
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C +CGK F + + HQ VH+GE+
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 2e-05
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
G + C C K F+Q L H +H G K
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G + C C K F+Q LQ H +HTG
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 4e-04
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
G + C C K F+Q L H +H G K
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG 42
Score = 36.7 bits (86), Expect = 7e-04
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G + C C K F+Q LQ H +HTG
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37
Score = 35.6 bits (83), Expect = 0.002
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
G++ ++C VCGK F++ + Q H+
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ 32
Score = 28.6 bits (65), Expect = 0.53
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + C++CG+ + L H +H G P S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.53
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + C++CG+ + L H +H G P S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 64.9 bits (159), Expect = 8e-14
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP KC CG S +L H +VHTGE+P +
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 51.4 bits (124), Expect = 5e-09
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG +K +L+ H VHTG+RP S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 47.1 bits (113), Expect = 1e-07
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK + + + +H+ VH+GE+P S+
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS 45
Score = 44.1 bits (105), Expect = 1e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C CGKG+ + HQ VH+GER
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 44.1 bits (105), Expect = 2e-06
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C CGK L+ H + H+ RP
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSK-FNLDMHQKVHTGERPSGP 43
Score = 40.6 bits (96), Expect = 2e-05
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCH 92
+G P+ C C K + K L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 36.7 bits (86), Expect = 6e-04
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K + K L H +HTG
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K + K L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSG 42
Score = 36.4 bits (85), Expect = 9e-04
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K + K L H +HTG
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C CGK + K+N +H+K
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK 33
Score = 28.3 bits (64), Expect = 0.77
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ CE CG+GY K L +H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 28.3 bits (64), Expect = 0.77
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ CE CG+GY K L +H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 64.4 bits (158), Expect = 9e-14
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
SGEKP KCS CG A +HL H R+HTG +P +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 50.6 bits (122), Expect = 9e-09
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE+ KC CG A +HLN H +HTG RP S
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 47.1 bits (113), Expect = 1e-07
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
+GEKPY+C+ CGK R + LN H + H+ RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRH-THLNEHRRIHTGYRPSGPS 44
Score = 45.2 bits (108), Expect = 7e-07
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G ++C CGK F H+ +H+G +P S+
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45
Score = 43.3 bits (103), Expect = 3e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G K Y+C CGK F HT H+ +H+G R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 39.8 bits (94), Expect = 5e-05
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG P+ C C K+F + L +H IH G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 35.9 bits (84), Expect = 0.001
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG P+ C C K+F + L +H IH G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G P+ CS C K+F + L +H IHTG
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G P+ CS C K+F + L +H IHTG
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37
Score = 34.0 bits (79), Expect = 0.006
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P++CS CGK F + + H++
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR 33
Score = 26.3 bits (59), Expect = 3.4
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ S +P+ C CG+ + L H +H G P S
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 26.3 bits (59), Expect = 3.4
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ S +P+ C CG+ + L H +H G P S
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 64.5 bits (158), Expect = 9e-14
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC CG A SSHL +H VH+GE+P ++
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45
Score = 50.2 bits (121), Expect = 1e-08
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC +CG A SHL +H VH+G+RP S
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 46.7 bits (112), Expect = 2e-07
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C CGK R + S L H HS RP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVS-SHLVQHHSVHSGERPSGP 43
Score = 46.4 bits (111), Expect = 3e-07
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C +CGK F H VHSGE+P S+
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45
Score = 43.7 bits (104), Expect = 2e-06
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C +CGK F + H VHSGER
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+F LV+H ++H+G +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 36.3 bits (85), Expect = 8e-04
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+F LV+H ++H+G +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K+F L +H +H+G
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 33.3 bits (77), Expect = 0.010
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K+F L +H +H+G
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37
Score = 33.3 bits (77), Expect = 0.011
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C VCGK F + H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS 33
Score = 27.1 bits (61), Expect = 1.6
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C++CG+ +++ L+ H +H+G P S
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 27.1 bits (61), Expect = 1.6
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C++CG+ +++ L+ H +H+G P S
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 64.4 bits (158), Expect = 1e-13
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC CG + S L RH VHT EKP ++
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45
Score = 53.3 bits (129), Expect = 9e-10
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KCDICG + +S LNRH +VHT ++P S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 49.8 bits (120), Expect = 1e-08
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG F+CD+CGK F + H MVH+ EKP S+
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45
Score = 46.3 bits (111), Expect = 3e-07
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKP++C CGK S LN H H+ +P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGR-SRLNRHSMVHTAEKPSGPS 44
Score = 43.6 bits (104), Expect = 3e-06
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCD 120
+ G K ++C +CGK F + H +VH+ E+
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 40.2 bits (95), Expect = 3e-05
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G PF C C KSF + L +H +H K
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 38.6 bits (91), Expect = 1e-04
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCD 425
G PF C C KSF + L +H +HT
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 37.9 bits (89), Expect = 3e-04
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G PF C C KSF + L +H +HT
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37
Score = 36.7 bits (86), Expect = 6e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G PF C C KSF + L +H +H K
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG 42
Score = 36.3 bits (85), Expect = 0.001
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P +C +CGK F + H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSM 33
Score = 29.8 bits (68), Expect = 0.18
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +PF C+ICG+ + + L H +H P S
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.18
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +PF C+ICG+ + + L H +H P S
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.9
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
+C CGK + S LN H H+ +P
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.9
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
+C CGK + S LN H H+ +P
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 64.1 bits (157), Expect = 1e-13
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
SGEKP +C CG +SHL H RVHTGEKP ++
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45
Score = 50.2 bits (121), Expect = 1e-08
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE+ +C+ CG T SHL+ H VHTG++P S
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 1e-07
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G FQC+ CGKRF + H+ VH+GEKP S+
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45
Score = 46.4 bits (111), Expect = 3e-07
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GEKP+QC CGKR + S L++H + H+ +P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQN-SHLHSHQRVHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 6e-06
Identities = 15/42 (35%), Positives = 16/42 (38%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCH 92
SG PF C C K FTQ L H +H G K
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 7e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G K +QC CGK F ++ HQ VH+GE+
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG PF C C K FTQ L H +H G K
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG 42
Score = 38.3 bits (90), Expect = 2e-04
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G PF C C K FTQ L H +HTG
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 4e-04
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G PF C C K FTQ L H +HTG
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37
Score = 34.4 bits (80), Expect = 0.004
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P +C CGKRF + + H++
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR 33
Score = 27.1 bits (61), Expect = 1.6
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ S +PF CE CG+ + L H +H G P S
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.6
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ S +PF CE CG+ + L H +H G P S
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 64.1 bits (157), Expect = 2e-13
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP C+ CG A + S+HL +H RVHT E ++
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45
Score = 51.7 bits (125), Expect = 3e-09
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ C++CG A +HLN+H+ VHT + S
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 45.6 bits (109), Expect = 5e-07
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG + C++CGK F+ H VH+ E S+
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45
Score = 45.6 bits (109), Expect = 5e-07
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY C CGK + + LN H++ H+
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLS-AHLNQHLRVHTQETLSGPS 44
Score = 40.2 bits (95), Expect = 4e-05
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P++C+ C K+F L +HL +H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCD 425
G P++C+ C K+F L +HL +HT T
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 36.7 bits (86), Expect = 7e-04
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P++C+ C K+F L +HL +H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG 42
Score = 36.3 bits (85), Expect = 0.001
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P++C+ C K+F L +HL +HT
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+ C+VCGK F + H +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR 33
Score = 27.9 bits (63), Expect = 1.1
Identities = 8/42 (19%), Positives = 18/42 (42%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C +CG+ + + L H+ +H S
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 27.9 bits (63), Expect = 1.1
Identities = 8/42 (19%), Positives = 18/42 (42%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C +CG+ + + L H+ +H S
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 64.1 bits (157), Expect = 2e-13
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
SGEKP KC+ CG +SHL H+R+HTGEKP +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 1e-08
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE+ KC+ CG T SHL H +HTG++P S
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 5e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
+G ++C+ CGK F H +H+GEKP S
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 6e-07
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GEKPY+C CGK + S L H + H+ +P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQN-SHLTNHWRIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 8e-06
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G K Y+C+ CGK F ++ H +H+GE+
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 2e-05
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG P+ C+ C K FTQ L H IH G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 5e-04
Identities = 15/40 (37%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG P+ C+ C K FTQ L H IH G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG 42
Score = 36.3 bits (85), Expect = 0.001
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G P+ C+ C K FTQ L H IHTG
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.001
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G P+ C+ C K FTQ L H IHTG
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37
Score = 34.8 bits (81), Expect = 0.003
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P++C+ CGK F + + H +
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR 33
Score = 25.9 bits (58), Expect = 4.1
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + S +P+ C CG+ + L H +H G P S
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.1
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + S +P+ C CG+ + L H +H G P S
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 63.7 bits (156), Expect = 2e-13
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
SGEKP KC CG A + HL H R+HTGEKP ++
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45
Score = 50.6 bits (122), Expect = 9e-09
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE+ KC CG A HL H+ +HTG++P S
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 2e-07
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
+GEKP++C CGK R+ L +H++ H+ +P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQN-IHLASHLRIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 2e-07
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G F+C CGK F H +H+GEKP S+
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45
Score = 42.5 bits (101), Expect = 6e-06
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G K ++C CGK F + H +H+GE+
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 7e-06
Identities = 17/42 (40%), Positives = 18/42 (42%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCH 92
SG PF C C K+F Q I L HL IH G K
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 2e-04
Identities = 17/40 (42%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG PF C C K+F Q I L HL IH G K
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG 42
Score = 37.1 bits (87), Expect = 5e-04
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G PF C C K+F Q + L HL IHTG
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.001
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G PF C C K+F Q + L HL IHTG
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37
Score = 33.6 bits (78), Expect = 0.007
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P +C CGK F + + H +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR 33
Score = 27.1 bits (61), Expect = 1.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + S +PF C+ CG+ ++ L H+ +H G P S
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + S +PF C+ CG+ ++ L H+ +H G P S
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 63.7 bits (156), Expect = 2e-13
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC CG + L H VHTGEKP ++
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45
Score = 49.5 bits (119), Expect = 2e-08
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG + L H +VHTG++P S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 8e-08
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK FI ++ Y H MVH+GEKP S+
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45
Score = 45.2 bits (108), Expect = 6e-07
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK +L H H+ +P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICR-RDLYTHHMVHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 2e-06
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C CGKGFI H +VH+GE+
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K F + L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K F + L H +HTG
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K F + L H +HTG
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K F + L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSG 42
Score = 34.1 bits (79), Expect = 0.005
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
TG++P++C CGK F + + H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH 32
Score = 28.3 bits (64), Expect = 0.71
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ CE CG+G+ ++ L H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 0.71
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ CE CG+G+ ++ L H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.9
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
++C CGK + +L H H+ +P
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.9
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
++C CGK + +L H H+ +P
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 64.0 bits (157), Expect = 2e-13
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 448 KPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQ-THS 502
+ C C A HLKRH+R HT EKPY C C + R L H Q HS
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR-DLLIRHAQKIHS 55
Score = 60.2 bits (147), Expect = 5e-12
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 118 KCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVH 168
C++C A + HL RH HT ++P+ C +C + F ++ H +K+H
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 57.9 bits (141), Expect = 3e-11
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 422 FQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHF-RVHTGEK 476
F C++C + F Q+ H H+ EKP C C A L RH ++H+G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 54.0 bits (131), Expect = 6e-10
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 60 PFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFH-QLVHSGE 114
F C C ++F ++ L +H H K Y C LC + F H Q +HSG
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 46.3 bits (111), Expect = 3e-07
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 278 RPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLP-IHTGST 334
R FVCE+C + + ++ L H H P+ C CN++FT++ L +H IH+G+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 46.3 bits (111), Expect = 3e-07
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 364 RPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLP-IHTGST 420
R FVCE+C + + ++ L H H P+ C CN++FT++ L +H IH+G+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 44.0 bits (105), Expect = 2e-06
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 31 RPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLN-IHNG 85
R FVCE+C + + ++ L H H+ P+ C CN++FT++ L++H IH+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 44.0 bits (105), Expect = 2e-06
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 505 RPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLN-IHNG 559
R FVCE+C + + ++ L H H+ P+ C CN++FT++ L++H IH+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 34.8 bits (81), Expect = 0.005
Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHV-GMHSG 57
C C + + L H ++H++ +P+ C +C + + + L+ H +HSG
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 32.8 bits (76), Expect = 0.020
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 534 PFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
F C C ++F ++ L +H H K Y
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYP 32
Score = 25.9 bits (58), Expect = 6.8
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 143 RPHECSVCGKRFAKKWNAQVHK 164
R C VC + FA++ + + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY 22
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 63.3 bits (155), Expect = 2e-13
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
SGE+P C+ CG SHL H + H EK ++
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45
Score = 52.9 bits (128), Expect = 1e-09
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGER C+ CG SHL H+ H ++ S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 47.9 bits (115), Expect = 7e-08
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GE+PY C CGK R S L H++ H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRH-SHLIEHLKRHFREKSSGP 43
Score = 43.7 bits (104), Expect = 2e-06
Identities = 11/43 (25%), Positives = 15/43 (34%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G + C+ CGK F H H EK S+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45
Score = 39.8 bits (94), Expect = 5e-05
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG P+ C+ C K+F + L++HL H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 37.9 bits (89), Expect = 3e-04
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G P+ C+ C K+F + L +HL H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG P+ C+ C K+F + L++HL H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSG 42
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G+RP+ C+ CGK F + + H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLK 33
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G P+ C+ C K+F + L +HL H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR 37
Score = 29.0 bits (66), Expect = 0.35
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ S RP+ C CG+ + L+ H+ H S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 29.0 bits (66), Expect = 0.35
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ S RP+ C CG+ + L+ H+ H S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 27.9 bits (63), Expect = 0.91
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 497 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
+ S RP+ C CG+ + L+ H+ H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 27.5 bits (62), Expect = 1.3
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
+GER P + C CGK + S L H++ H +
Sbjct: 8 SGER---P--YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 26.3 bits (59), Expect = 3.0
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 6 ECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
C CGK + S L H++ H +
Sbjct: 14 GCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 63.3 bits (155), Expect = 3e-13
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
GEKP +CS CG + S L +H+ HT EKP ++
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS 45
Score = 51.0 bits (123), Expect = 5e-09
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
GE+ +C CG + + L +H + HT ++P S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 46.0 bits (110), Expect = 3e-07
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
G +QC CGK F H + H+ EKP S+
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS 45
Score = 44.8 bits (107), Expect = 7e-07
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
GEKPYQC+ CGK + L H TH+ +P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGS-YRLTQHWITHTREKPSGP 43
Score = 43.7 bits (104), Expect = 2e-06
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K YQC CGK F H + H+ E+
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
G P+ C C KSF+ L +H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 36.8 bits (86), Expect = 7e-04
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ CS C KSF+ L +H HT
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ CS C KSF+ L +H HT
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37
Score = 36.0 bits (84), Expect = 0.001
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
G++P++CS CGK F+ + H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWI 33
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/40 (27%), Positives = 14/40 (35%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
G P+ C C KSF+ L +H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSG 42
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/43 (20%), Positives = 15/43 (34%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C CG+ + L H H P S
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/43 (20%), Positives = 15/43 (34%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C CG+ + L H H P S
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 25.2 bits (56), Expect = 9.2
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
GE+ ++C CGK + L H TH+ +P
Sbjct: 8 EGEKP-----YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 25.2 bits (56), Expect = 9.6
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
++C CGK + L H TH+ +P
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 63.3 bits (155), Expect = 3e-13
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
SGE+P KC+ CG SHL H R+H+ EK ++
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45
Score = 51.8 bits (125), Expect = 3e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGER KC+ CG +SHL H+ +H+ ++ S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 44.8 bits (107), Expect = 8e-07
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GE+P++C CGK R S L H++ HS +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRR-SHLAGHLRLHSREKSSGP 43
Score = 44.4 bits (106), Expect = 1e-06
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G F+C+ CGK F + H +HS EK S+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45
Score = 42.1 bits (100), Expect = 8e-06
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G + ++C+ CGKGF + H +HS E++
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 41.0 bits (97), Expect = 2e-05
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG PF C+ C K F ++ L HL +H+ K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G PF C+ C K F ++ L HL +H+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG PF C+ C K F ++ L HL +H+ K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG 42
Score = 37.1 bits (87), Expect = 5e-04
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G PF C+ C K F ++ L HL +H+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37
Score = 36.0 bits (84), Expect = 0.001
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G+RP +C+ CGK F ++ + H +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR 33
Score = 29.8 bits (68), Expect = 0.17
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ S RPF C CG+G+ + L H+ +H+ S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 29.8 bits (68), Expect = 0.17
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ S RPF C CG+G+ + L H+ +H+ S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 63.3 bits (155), Expect = 3e-13
Identities = 20/42 (47%), Positives = 22/42 (52%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
SGEKP KC CG +S L H RVHTGEKP +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 1e-08
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE+ KC+ CG T S L+ H VHTG++P S
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 2e-07
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G F+C+ CGKRF + H+ VH+GEKP S+
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45
Score = 46.4 bits (111), Expect = 2e-07
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GEKP++C CGKR + S+L++H + H+ +P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQN-SQLHSHQRVHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 6e-06
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G K ++C CGK F ++ HQ VH+GE+
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 1e-05
Identities = 15/41 (36%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG PF C C K FTQ L H +H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG PF C C K FTQ L H +H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG 42
Score = 37.9 bits (89), Expect = 3e-04
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G PF C C K FTQ L H +HTG
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G PF C C K FTQ L H +HTG
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37
Score = 36.7 bits (86), Expect = 7e-04
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P +C CGKRF + H++
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR 33
Score = 28.6 bits (65), Expect = 0.48
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ S +PF CE CG+ + L H +H G P S
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.48
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ S +PF CE CG+ + L H +H G P S
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 63.3 bits (155), Expect = 3e-13
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC+ CG +SHL RH RVHTG KP ++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45
Score = 49.1 bits (118), Expect = 3e-08
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG T SHL RH VHTG +P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 45.2 bits (108), Expect = 7e-07
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK F H+ VH+G KP S+
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45
Score = 43.7 bits (104), Expect = 2e-06
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK + S L H + H+ +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQN-SHLARHRRVHTGGKPSGPS 44
Score = 42.1 bits (100), Expect = 7e-06
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F ++ H+ VH+G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 39.8 bits (94), Expect = 6e-05
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K FTQ L +H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 36.0 bits (84), Expect = 0.001
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K FTQ L +H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG 42
Score = 35.6 bits (83), Expect = 0.002
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K FTQ L +H +HTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 35.2 bits (82), Expect = 0.003
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K FTQ L +H +HTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37
Score = 32.5 bits (75), Expect = 0.020
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C+ CGK F + + H++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRR 33
Score = 25.9 bits (58), Expect = 5.1
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + L H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 25.9 bits (58), Expect = 5.1
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + L H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.9 bits (154), Expect = 3e-13
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC+ CG +SHL RH +HTGEKP ++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45
Score = 49.0 bits (118), Expect = 3e-08
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG T SHL RH +HTG++P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 45.9 bits (110), Expect = 4e-07
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK + S L H H+ +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQN-SHLVRHRGIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 9e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK F H+ +H+GEKP S+
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45
Score = 41.7 bits (99), Expect = 1e-05
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F ++ H+ +H+GE+
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 7e-05
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K FTQ LV+H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.001
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K FTQ LV+H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K FTQ L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K FTQ L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37
Score = 34.0 bits (79), Expect = 0.005
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C+ CGK F + + H+
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG 33
Score = 25.5 bits (57), Expect = 7.6
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + L+ H G+H G P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 7.6
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + L+ H G+H G P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.9 bits (154), Expect = 3e-13
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+G KP +C+ CG A +S L RH RVHTGEKP ++
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45
Score = 49.1 bits (118), Expect = 3e-08
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+G + +C+ CG A + S L RH VHTG++P S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 3e-07
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG +QC+ CGK F H+ VH+GEKP S+
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45
Score = 44.1 bits (105), Expect = 2e-06
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TG KPYQC CGK +T S+L H + H+ +P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQT-SKLARHQRVHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 2e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K YQC+ CGK F + HQ VH+GE+
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 6e-05
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K+F+Q L +H +H G K
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K+F+Q L +H +H G K
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K+F+Q L +H +HTG
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.005
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K+F+Q L +H +HTG
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37
Score = 32.9 bits (76), Expect = 0.014
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
TG +P++C+ CGK F++ H+
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQ 32
Score = 26.0 bits (58), Expect = 4.0
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + L H +H G P S
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 4.0
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + L H +H G P S
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.9 bits (154), Expect = 3e-13
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP C CG A + S L+ H R+HTGEKP ++
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45
Score = 49.1 bits (118), Expect = 2e-08
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG + C+ CGK FIH H+ +H+GEKP S+
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45
Score = 48.7 bits (117), Expect = 4e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ C+ CG A S L H +HTG++P S
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 46.8 bits (112), Expect = 2e-07
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY C CGK S+L H + H+ +P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHD-SQLQEHQRIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 7e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y C CGK FIH + + HQ +H+GE+
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 1e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+F L +H IH G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.001
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+ C CGK F Q H++
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQR 33
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K+F LQ+H IHTG
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K+F LQ+H IHTG
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+F L +H IH G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG 42
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ CE CG+ + L H +H G P S
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ CE CG+ + L H +H G P S
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
+ C CGK + S+L H + H+ +P
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
+ C CGK + S+L H + H+ +P
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.9 bits (154), Expect = 3e-13
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+G+KP KC+ CG +SHL RH +HTGEKP +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 3e-08
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+G++ KC+ CG T SHL RH +HTG++P S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 1e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK F H+ +H+GEKP S+
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45
Score = 43.6 bits (104), Expect = 3e-06
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TG+KPY+C CGK + S L H H+ +P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQN-SHLARHRGIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 3e-05
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F ++ H+ +H+GE+
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K FTQ L +H IH G K
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K FTQ L +H IH G K
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG 42
Score = 36.7 bits (86), Expect = 7e-04
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K FTQ L +H IHTG
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.001
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K FTQ L +H IHTG
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 32.1 bits (74), Expect = 0.033
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG +P++C+ CGK F + + H+
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRG 33
Score = 25.2 bits (56), Expect = 8.5
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + L H G+H G P S
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.5
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + L H G+H G P S
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.9 bits (154), Expect = 4e-13
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC+ CG +SHL H R+HTG KP ++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45
Score = 49.1 bits (118), Expect = 2e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG T SHL H +HTG +P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 46.4 bits (111), Expect = 3e-07
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK F H+ +H+G KP S+
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45
Score = 45.6 bits (109), Expect = 5e-07
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK + S L H + H+ ++P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQN-SHLANHQRIHTGVKPSGPS 44
Score = 42.1 bits (100), Expect = 8e-06
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F ++ HQ +H+G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 40.6 bits (96), Expect = 3e-05
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCH 92
+G P+ C+ C K FTQ L H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 36.7 bits (86), Expect = 6e-04
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K FTQ L H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSG 42
Score = 36.3 bits (85), Expect = 0.001
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K FTQ L H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 35.6 bits (83), Expect = 0.001
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K FTQ L H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37
Score = 34.4 bits (80), Expect = 0.004
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C+ CGK F + + H++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR 33
Score = 26.3 bits (59), Expect = 3.3
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + L H +H G+ P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 26.3 bits (59), Expect = 3.3
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + L H +H G+ P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.9 bits (154), Expect = 4e-13
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC+ CG +SHL RH +HTGEKP ++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45
Score = 49.0 bits (118), Expect = 2e-08
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG T SHL RH +HTG++P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 3e-07
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK F H+ +H+GEKP S+
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45
Score = 43.6 bits (104), Expect = 3e-06
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK + S L H H+ +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQN-SHLARHRGIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 9e-06
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F ++ H+ +H+GE+
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 6e-05
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K FTQ L +H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.001
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K FTQ L +H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG 42
Score = 35.6 bits (83), Expect = 0.002
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K FTQ L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K FTQ L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 32.5 bits (75), Expect = 0.023
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C+ CGK F + + H+
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRG 33
Score = 25.9 bits (58), Expect = 4.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + L H G+H G P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + L H G+H G P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 65.2 bits (158), Expect = 4e-13
Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 6/99 (6%)
Query: 461 SSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQ-----THSDLRPFVCEICGQG 515
S S K + + TG ++C C T+ EL H+ +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAY-DTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 516 YKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHL 554
K++LL G C +C SF L H+
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100
Score = 58.6 bits (141), Expect = 7e-11
Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 7/104 (6%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPI--HTGSTRFQCDLCG---KRFIHQKSF 437
++ + G + F C C+ ++ V L H+ H + D ++S
Sbjct: 9 LYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSL 68
Query: 438 YIHKMVHSGEKPIKCSACGLAVLSSSHLKRHF--RVHTGEKPYQ 479
+ +K +KC CG + S L H H +
Sbjct: 69 LEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
Score = 58.2 bits (140), Expect = 1e-10
Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNI-----HNGTKKYQCHLCGKGFIHHTSY 104
++ + +G F C C+ ++ + L H+N + + + S
Sbjct: 9 LYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSL 68
Query: 105 KFHQLVHSGERNVKCDICGLALTTKSHLNRHM 136
+ ++ +KC CG + + L+ HM
Sbjct: 69 LEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100
Score = 55.5 bits (133), Expect = 8e-10
Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 5/95 (5%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQ-----LVHSGERNVKCDICGLALTTKSHLN 133
+ +I G K++C C + H + + K L
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVH 168
+ +C CG F + VH K
Sbjct: 70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 52.8 bits (126), Expect = 9e-09
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 8/100 (8%)
Query: 409 LQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSH---- 464
+ + I TG+++F+C C + +H M +G
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVH-MNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 465 --LKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHS 502
L +K +C CG ++ +L+ H+
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSF-ESLQDLSVHMIKTK 104
Score = 49.8 bits (118), Expect = 9e-08
Identities = 19/117 (16%), Positives = 32/117 (27%), Gaps = 25/117 (21%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAH 356
++ + G + F C C+ ++ V L H E H
Sbjct: 9 LYGSIFTGASKFRCKDCSAAYDTLVELTVH----------MNETGHY------------- 45
Query: 357 IQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHL 413
+ K++LL G + C +C SF L H+
Sbjct: 46 --RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100
Score = 48.6 bits (115), Expect = 3e-07
Identities = 19/111 (17%), Positives = 31/111 (27%), Gaps = 7/111 (6%)
Query: 351 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGM-----HNGINPFTCSFCNKSFTQ 405
S + + F C+ C Y L VH+ + + S +
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64
Query: 406 KVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIH--KMVHSGEKPIKCSA 454
K L + +C CG F + +H K H + S
Sbjct: 65 KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSSG 115
Score = 47.5 bits (112), Expect = 6e-07
Identities = 17/95 (17%), Positives = 27/95 (28%), Gaps = 5/95 (5%)
Query: 18 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGM-----HSGIHPFTCHFCNKSFTQ 72
S + + F C+ C Y L VH+ + S +
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64
Query: 73 KIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFH 107
K L++ + K +C CG F H
Sbjct: 65 KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 46.3 bits (109), Expect = 1e-06
Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Query: 5 HECPTCGKKWRTVSELNAHIQ-----THSDLRPFVCEICGQGYKMKKALLVHVGMHSGIH 59
C C + T+ EL H+ + K++LL G
Sbjct: 20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79
Query: 60 PFTCHFCNKSFTQKIGLVKHL 80
C +C SF L H+
Sbjct: 80 VLKCMYCGHSFESLQDLSVHM 100
Score = 45.9 bits (108), Expect = 2e-06
Identities = 18/91 (19%), Positives = 27/91 (29%), Gaps = 10/91 (10%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQ-----THSDLRPFVCEICGQGYKMKKALL 296
TG C C + T+ EL H+ + K++LL
Sbjct: 15 TGASK-----FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHL 327
G + C +C SF L H+
Sbjct: 70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100
Score = 40.1 bits (93), Expect = 2e-04
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 102 TSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQ 161
+S K + + +G +C C A T L HM TG + K+W+
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKP 63
Query: 162 VHKK 165
+
Sbjct: 64 RKRS 67
Score = 36.7 bits (84), Expect = 0.003
Identities = 7/39 (17%), Positives = 11/39 (28%)
Query: 130 SHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVH 168
S + + TG C C + VH +
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETG 43
Score = 35.1 bits (80), Expect = 0.011
Identities = 15/120 (12%), Positives = 29/120 (24%), Gaps = 25/120 (20%)
Query: 265 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 324
S + + F C+ C Y L VH+ G + + ++
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKRWSKP 63
Query: 325 KHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVH 384
+ + + C CG ++ + L VH
Sbjct: 64 RKRSLLE------------------------MEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 34.0 bits (77), Expect = 0.036
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNI 556
++ + +G F C C+ ++ + L H+N
Sbjct: 9 LYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE 41
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 4e-13
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC CG +SHL RH +HTGEKP ++
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45
Score = 49.8 bits (120), Expect = 2e-08
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC CG SHL RH L+HTG++P S
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 2e-07
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK RR S L H H+ +P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRN-SHLARHQLIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 1e-06
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK F H+++H+GEKP S+
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45
Score = 39.4 bits (93), Expect = 6e-05
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCH 92
+G P+ CH C K F + L +H IH G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 35.9 bits (84), Expect = 0.001
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ CH C K F + L +H IH G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG 42
Score = 35.5 bits (83), Expect = 0.002
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C CGK F + + H+
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL 33
Score = 35.1 bits (82), Expect = 0.002
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K F + L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K F + L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37
Score = 26.3 bits (59), Expect = 3.6
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ ++ L H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.6
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ ++ L H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 4e-13
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
SGEKP C CG A S+ L RH R+HTGEKP +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 5e-09
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE+ CD CG A + L RH +HTG++P S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 2e-07
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G + CD CGK F H+ +H+GEKP S+
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45
Score = 46.0 bits (110), Expect = 4e-07
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GEKPY C CGK + +EL H + H+ +P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLS-AELVRHQRIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 2e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G K Y C CGK F HQ +H+GE+
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 3e-05
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG P+ C +C K+F LV+H IH G K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG P+ C +C K+F LV+H IH G K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSG 42
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G P+ C +C K+F L +H IHTG
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G P+ C +C K+F L +H IHTG
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37
Score = 34.4 bits (80), Expect = 0.004
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P+ C CGK F H++
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR 33
Score = 28.2 bits (64), Expect = 0.69
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ S +P+VC+ CG+ + + L+ H +H G P S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 0.69
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ S +P+VC+ CG+ + + L+ H +H G P S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.6 bits (153), Expect = 5e-13
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP CS CG A S S+L H R H+GEKP ++
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 45
Score = 49.5 bits (119), Expect = 2e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ C CG A ++KS+L HM H+G++P S
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 47.9 bits (115), Expect = 7e-08
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
GEKPY C+ CGK S L H++THS +P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSK-SYLIIHMRTHSGEKPSGPS 44
Score = 46.0 bits (110), Expect = 4e-07
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
G + C CGK F + IH HSGEKP S+
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 45
Score = 42.2 bits (100), Expect = 8e-06
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y C CGK F + H HSGE+
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 40.6 bits (96), Expect = 3e-05
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+F+ K L+ H+ H+G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
G++P+ CS CGK F+ K +H +
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR 33
Score = 36.8 bits (86), Expect = 6e-04
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+F+ K L+ H+ H+G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG 42
Score = 36.8 bits (86), Expect = 7e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ CS C K+F+ K L H+ H+G
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ CS C K+F+ K L H+ H+G
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37
Score = 29.4 bits (67), Expect = 0.22
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + K L++H+ H+G P S
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.22
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + K L++H+ H+G P S
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.8
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
GE+ + C CGK + + S L H++THS +P
Sbjct: 8 AGEKP-----YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
+ C CGK + + S L H++THS +P
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 5e-13
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP C+ CG + + SHL RH R+HTGEKP +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 9e-09
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ C+ CG + KSHLNRH +HTG++P S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 4e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
TG + C+ CGK FI + H+ +H+GEKP S
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 6e-07
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY C CGK + S LN H + H+ +P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQK-SHLNRHRRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 3e-05
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C KSF QK L +H IH G K
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 5e-04
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C KSF QK L +H IHTG
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 5e-04
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C KSF QK L +H IHTG
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37
Score = 36.7 bits (86), Expect = 6e-04
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C KSF QK L +H IH G K
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+ C+ CGK F +K + H++
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRR 33
Score = 27.9 bits (63), Expect = 0.80
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P++C CG+ + K L H +H G P S
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 0.80
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P++C CG+ + K L H +H G P S
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 5e-13
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+G+K KC+ C SS L H R+HTGEKP ++
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45
Score = 49.8 bits (120), Expect = 2e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+G++ KC+ C T S L H +HTG++P S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 3e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
G F+C+ C K F S +H+ +H+GEKP S+
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45
Score = 42.5 bits (101), Expect = 5e-06
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
G+K ++C C K ++ S L H + H+ +P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQS-SSLTVHQRIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 7e-06
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K ++C+ C K F +S HQ +H+GE+
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 3e-05
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G F C+ C K+FTQ L H IH G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 6e-04
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G F C+ C K+FTQ L H IH G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG 42
Score = 36.7 bits (86), Expect = 6e-04
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G F C+ C K+FTQ L H IHTG
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 8e-04
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G F C+ C K+FTQ L H IHTG
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37
Score = 33.6 bits (78), Expect = 0.007
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
G + +C+ C K F + + VH++
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR 33
Score = 27.9 bits (63), Expect = 0.80
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + + F C C + + +L VH +H G P S
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 0.80
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + + F C C + + +L VH +H G P S
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 5e-13
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP +C C A + L +H RVH+GEKP +
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 47.9 bits (115), Expect = 8e-08
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +CD+C A + + L +H VH+G++P S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 46.3 bits (111), Expect = 3e-07
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++CD+C K F H S H+ VHSGEKP S+
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45
Score = 45.2 bits (108), Expect = 6e-07
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C C K + L H + HS +P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHH-ASLTQHQRVHSGEKPSGPS 44
Score = 45.2 bits (108), Expect = 7e-07
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C +C K F HH S HQ VHSGE+
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 38.6 bits (91), Expect = 1e-04
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+F+ L +H +H+G K
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K+F+ L +H +H+G
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+F+ L +H +H+G K
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG 42
Score = 34.8 bits (81), Expect = 0.004
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
TG++P+EC VC K F+ + H+
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQ 32
Score = 34.4 bits (80), Expect = 0.004
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K+F+ L +H +H+G
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37
Score = 25.9 bits (58), Expect = 4.0
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C++C + + +L H +H+G P S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.0
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C++C + + +L H +H+G P S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 6e-13
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEK C CG + + L +H R+H+GEKP ++
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45
Score = 47.9 bits (115), Expect = 7e-08
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ C CG + + L +H +H+G++P S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 46.8 bits (112), Expect = 2e-07
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG + C CGK F H+ +HSGEKP S+
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45
Score = 45.2 bits (108), Expect = 6e-07
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEK Y C CGK R L H + HS +P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRA-PCLLKHERLHSGEKPSGP 43
Score = 42.9 bits (102), Expect = 5e-06
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y C CGK F H+ +HSGE+
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 41.7 bits (99), Expect = 9e-06
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G + C C KSF++ L+KH +H+G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G + C C KSF++ L+KH +H+G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG 42
Score = 37.9 bits (89), Expect = 3e-04
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G + C C KSF++ L KH +H+G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 4e-04
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G + C C KSF++ L KH +H+G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37
Score = 34.0 bits (79), Expect = 0.006
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++ + C CGK F++ H++
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHER 33
Score = 29.8 bits (68), Expect = 0.16
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + + + C+ CG+ + LL H +H+G P S
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.16
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + + + C+ CG+ + LL H +H+G P S
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 62.2 bits (152), Expect = 6e-13
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCG 484
SGEKP KC CG ++S H R H+GEKP + G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP-SSG 46
Score = 49.5 bits (119), Expect = 2e-08
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCG 151
SGE+ KC+ CG T S H H+G++P S G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 46.8 bits (112), Expect = 2e-07
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICG 513
+GEKP++C CGK S+ +H ++HS +P G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTN-SQCYSHQRSHSGEKPSGPS-SG 46
Score = 46.4 bits (111), Expect = 3e-07
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G F+C+ CGK F Y H+ HSGEKP S+
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS 45
Score = 44.1 bits (105), Expect = 2e-06
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICG 123
+ +G K ++C CGKGF ++ HQ HSGE+ G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 41.0 bits (97), Expect = 2e-05
Identities = 12/41 (29%), Positives = 13/41 (31%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG PF C C K F H H+G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 4e-04
Identities = 12/40 (30%), Positives = 13/40 (32%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG PF C C K F H H+G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG 42
Score = 37.1 bits (87), Expect = 5e-04
Identities = 11/45 (24%), Positives = 13/45 (28%), Gaps = 1/45 (2%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCG 428
+G PF C C K F H H+G G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 10/35 (28%), Positives = 12/35 (34%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G PF C C K F H H+G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37
Score = 33.3 bits (77), Expect = 0.010
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
+G++P +C CGK F H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31
Score = 31.0 bits (71), Expect = 0.080
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + S +PF CE CG+G+ H H+G P S
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 31.0 bits (71), Expect = 0.080
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + S +PF CE CG+G+ H H+G P S
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.14
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + S +PF CE CG+G+ H HSG P
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.7
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICG 39
+C CGK + T S+ +H ++HS +P G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 27.1 bits (61), Expect = 1.7
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICG 286
+C CGK + T S+ +H ++HS +P G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 62.5 bits (153), Expect = 6e-13
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP +C+ CG + SS L H R+HTGEKP ++
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45
Score = 49.4 bits (119), Expect = 2e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C CG + + S L H +HTG++P S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 2e-07
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKP++C CGK + S+L H + H+ +P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSIS-SQLATHQRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 2e-07
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG F+C CGK F H+ +H+GEKP S+
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45
Score = 43.3 bits (103), Expect = 3e-06
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K ++C CGK F + HQ +H+GE+
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 8e-05
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G PF C C KSF+ L H IH G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 6e-04
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG++P EC+ CGK F+ H
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATH 31
Score = 35.6 bits (83), Expect = 0.001
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G PF C+ C KSF+ L H IHTG
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.001
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G PF C C KSF+ L H IH G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSG 42
Score = 35.6 bits (83), Expect = 0.002
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G PF C+ C KSF+ L H IHTG
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37
Score = 28.2 bits (64), Expect = 0.73
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +PF C CG+ + + L H +H G P S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 0.73
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +PF C CG+ + + L H +H G P S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.9
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
TGE+ EC CGK + S+L H + H+ +P
Sbjct: 8 TGEKP-----FECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 5.5
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
EC CGK + S+L H + H+ +P
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 62.2 bits (152), Expect = 6e-13
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP C CG + +S L +H RVH+GEKP +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 48.3 bits (116), Expect = 5e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ C CG + S L +H VH+G++P S
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 48.3 bits (116), Expect = 5e-08
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY C CGK R S L H + HS +P
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWA-SCLLKHQRVHSGEKPSGPS 44
Score = 44.9 bits (107), Expect = 8e-07
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
TG + C CGK F H+ VHSGEKP S
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-06
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y C CGK F + HQ VHSGE+
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 41.0 bits (97), Expect = 2e-05
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C KSF L+KH +H+G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 37.6 bits (88), Expect = 4e-04
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C KSF L+KH +H+G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG 42
Score = 37.2 bits (87), Expect = 5e-04
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C KSF L KH +H+G
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C KSF L KH +H+G
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37
Score = 35.2 bits (82), Expect = 0.002
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+ C CGK F H++
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQR 33
Score = 28.7 bits (65), Expect = 0.44
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C+ CG+ ++ LL H +H+G P S
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 28.7 bits (65), Expect = 0.44
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C+ CG+ ++ LL H +H+G P S
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 26.8 bits (60), Expect = 2.6
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
TGE+ + C CGK +R S L H + HS +P
Sbjct: 8 TGEKP-----YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 26.8 bits (60), Expect = 2.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
+ C CGK +R S L H + HS +P
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 62.1 bits (152), Expect = 6e-13
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP C CG A L +H R+HTGEKP ++
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45
Score = 49.8 bits (120), Expect = 1e-08
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ C CG A + LN+H +HTG++P S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 1e-07
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG F C CGK F H+ +H+GEKP S+
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45
Score = 45.6 bits (109), Expect = 4e-07
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKP+ C CGK LN H + H+ +P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDH-IGLNQHRRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 1e-06
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K + C CGK F H H+ +H+GE+
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G PF C C K+F+ IGL +H IH G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 6e-04
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G PF C C K+F+ +GL +H IHTG
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G PF C C K+F+ +GL +H IHTG
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37
Score = 36.7 bits (86), Expect = 7e-04
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G PF C C K+F+ IGL +H IH G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG 42
Score = 34.8 bits (81), Expect = 0.004
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P +C CGK F+ H++
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR 33
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +PF C CG+ + L H +H G P S
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +PF C CG+ + L H +H G P S
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 6.6
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
TGE+ +C CGK + LN H + H+ +P
Sbjct: 8 TGEKP-----FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 6.8
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
+C CGK + LN H + H+ +P
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 62.2 bits (152), Expect = 6e-13
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEK KC+ CG +S L +H ++HTGEKP ++
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45
Score = 48.7 bits (117), Expect = 3e-08
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG + S L++H +HTG++P S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 5e-07
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEK Y+C CGK R S+L+ H + H+ +P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRN-SQLSQHQKIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 6e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG R++C+ CGK F H+ +H+GEKP S+
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45
Score = 42.5 bits (101), Expect = 6e-06
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K+Y+C+ CGK F ++ HQ +H+GE+
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 3e-05
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCH 92
+G + C+ C K F++ L +H IH G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 7e-04
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G + C+ C K F++ L +H IH G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG 42
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G + C+ C K F++ L +H IHTG
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++ ++C+ CGK F++ H+K
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G + C+ C K F++ L +H IHTG
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37
Score = 27.1 bits (61), Expect = 1.8
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + + C CG+ + L H +H G P S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.8
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + + C CG+ + L H +H G P S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.2 bits (152), Expect = 6e-13
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC+ CG A +S L RH R+HTGEKP ++
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45
Score = 49.1 bits (118), Expect = 3e-08
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG A + S L RH +HTG++P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 2e-07
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK F H+ +H+GEKP S+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45
Score = 44.8 bits (107), Expect = 8e-07
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK +T S+L H + H+ +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQT-SKLARHQRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F + HQ +H+GE+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 7e-05
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K+F+Q L +H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K+F+Q L +H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K+F+Q L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K+F+Q L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37
Score = 34.4 bits (80), Expect = 0.005
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C+ CGK F++ H++
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR 33
Score = 25.9 bits (58), Expect = 4.8
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C CG+ + L H +H G P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.8
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C CG+ + L H +H G P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.1 bits (152), Expect = 7e-13
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP C+ CG A S+L +H ++HT +KP ++
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45
Score = 51.0 bits (123), Expect = 7e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ C CG A T +S+L +H +HT +P S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 44.4 bits (106), Expect = 1e-06
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY C CGK S L H + H+ +P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIR-SNLIKHQKIHTKQKPSGPS 44
Score = 44.0 bits (105), Expect = 2e-06
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG + C CGK F + + H+ +H+ +KP S+
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45
Score = 41.7 bits (99), Expect = 1e-05
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y C CGK F ++ HQ +H+ ++
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+FT + L+KH IH K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 36.3 bits (85), Expect = 9e-04
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+FT + L+KH IH K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG 42
Score = 35.6 bits (83), Expect = 0.002
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K+FT + L KH IHT
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K+FT + L KH IHT
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+ C+ CGK F + N H+K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQK 33
Score = 28.2 bits (64), Expect = 0.67
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P++C CG+ + ++ L+ H +H P S
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 28.2 bits (64), Expect = 0.67
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P++C CG+ + ++ L+ H +H P S
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 25.2 bits (56), Expect = 7.6
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
TGE+ + C CGK + S L H + H+ +P
Sbjct: 8 TGEKP-----YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.1 bits (152), Expect = 7e-13
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP KC+ CG A + S+L H +HTGEKP +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 4e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG A S+L H ++HTG++P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 3e-07
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK F + H+++H+GEKP S+
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45
Score = 44.4 bits (106), Expect = 1e-06
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK R S L H H+ +P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAH-SNLTTHQVIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-06
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F H++ HQ++H+GE+
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K+F L H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K+F L H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C+ CGK F N H+
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQV 33
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K+F L H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37
Score = 34.4 bits (80), Expect = 0.005
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K+F L H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG 42
Score = 26.7 bits (60), Expect = 2.6
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ ++ L H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.6
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ ++ L H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.1 bits (152), Expect = 7e-13
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KCS CG A S L H + HTGE+ ++
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 45
Score = 50.6 bits (122), Expect = 9e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC CG A T KS L+ H HTG+R S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 47.1 bits (113), Expect = 1e-07
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C+ CGK R S L+ H Q+H+ R
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRK-SGLHIHQQSHTGERHSGP 43
Score = 46.7 bits (112), Expect = 2e-07
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK F + +IH+ H+GE+ S+
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 45
Score = 43.3 bits (103), Expect = 4e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C CGK F + HQ H+GER+
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 39.8 bits (94), Expect = 6e-05
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+FT+K GL H H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++CS CGK F +K +H++
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ 33
Score = 37.5 bits (88), Expect = 4e-04
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ CS C K+FT+K GL H HTG
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 37.5 bits (88), Expect = 4e-04
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ CS C K+FT+K GL H HTG
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37
Score = 35.9 bits (84), Expect = 0.001
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+FT+K GL H H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG 42
Score = 29.4 bits (67), Expect = 0.29
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C CG+ + K L +H H G S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 29.4 bits (67), Expect = 0.29
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C CG+ + K L +H H G S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 25.9 bits (58), Expect = 4.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
++C CGK + S L+ H Q+H+ R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 25.9 bits (58), Expect = 4.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
++C CGK + S L+ H Q+H+ R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 62.1 bits (152), Expect = 7e-13
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
S EKP KC CG +L H RVH GEK ++
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45
Score = 51.3 bits (124), Expect = 5e-09
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
S E+ KC+ CG + +L+ H VH G++ S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 45.9 bits (110), Expect = 3e-07
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+ ++C+ CGK + + + +H+ VH GEK S+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45
Score = 44.0 bits (105), Expect = 1e-06
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+ EKPY+C CGK R L+ H + H +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRR-LNLDMHQRVHMGEKTSGP 43
Score = 44.0 bits (105), Expect = 2e-06
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ + K Y+C CGKG+ + HQ VH GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 40.2 bits (95), Expect = 3e-05
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
S P+ C C K + +++ L H +H G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 37.9 bits (89), Expect = 3e-04
Identities = 8/41 (19%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+ P+ C C K + +++ L H +H G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 37.5 bits (88), Expect = 4e-04
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+ P+ C C K + +++ L H +H G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37
Score = 36.7 bits (86), Expect = 6e-04
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
S P+ C C K + +++ L H +H G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSG 42
Score = 35.9 bits (84), Expect = 0.001
Identities = 7/31 (22%), Positives = 18/31 (58%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+ ++P++C CGK + ++ N +H++
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR 33
Score = 30.9 bits (71), Expect = 0.065
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + S +P+ CE CG+GY + L +H +H G S
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 30.9 bits (71), Expect = 0.065
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + S +P+ CE CG+GY + L +H +H G S
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 29.8 bits (68), Expect = 0.18
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + S +P+ CE CG+GY + L +H +H G
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.2 bits (152), Expect = 8e-13
Identities = 18/42 (42%), Positives = 19/42 (45%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
SGEKP KC CG L H RVHTGEK +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE+ KC CG + L+ H VHTG++ S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 45.6 bits (109), Expect = 4e-07
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G ++C CGK + + H+ VH+GEK S+
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45
Score = 45.2 bits (108), Expect = 7e-07
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GEKPY+C CGK +R +L+ H + H+ +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRR-LDLDFHQRVHTGEKLSGP 43
Score = 44.4 bits (106), Expect = 1e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCD 120
+ +G K Y+C CGKG+ FHQ VH+GE+
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 40.2 bits (95), Expect = 4e-05
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG P+ C C K + +++ L H +H G K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 37.1 bits (87), Expect = 5e-04
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCD 425
+G P+ C C K + +++ L H +HTG
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 36.7 bits (86), Expect = 7e-04
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG P+ C C K + +++ L H +H G K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG 42
Score = 36.4 bits (85), Expect = 0.001
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G P+ C C K + +++ L H +HTG
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37
Score = 34.8 bits (81), Expect = 0.003
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
+G++P++C CGK + ++ + H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31
Score = 29.4 bits (67), Expect = 0.28
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + S +P+ C CG+GYK + L H +H G S
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 29.4 bits (67), Expect = 0.28
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + S +P+ C CG+GYK + L H +H G S
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 8e-13
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP +C CG A ++L +H R+HTGEKP ++
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45
Score = 49.4 bits (119), Expect = 2e-08
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C CG A K++L +H +HTG++P S
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 1e-06
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C CGK + + L H + H+ +P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQK-ANLTQHQRIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 1e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
TG ++C CGK F + + H+ +H+GEKP S
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 1e-05
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C CGK F + HQ +H+GE+
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 3e-05
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+F QK L +H IH G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+F QK L +H IH G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG 42
Score = 36.3 bits (85), Expect = 9e-04
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K+F QK L +H IHTG
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.001
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K+F QK L +H IHTG
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+ C CGK FA+K N H++
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR 33
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + K L H +H G P S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + K L H +H G P S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 8e-13
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
SGEKP C+ CG S L H R HTGEKP +
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 4e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE+ C+ CG + KS L+ H HTG++P S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 6e-07
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
+GEKPY C CGK + S L+AH +TH+ +P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQK-SILSAHQRTHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 3e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
+G + C+ CGK F + H+ H+GEKP S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 9e-06
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G K Y C+ CGK F + HQ H+GE+
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 1e-05
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG P+ C+ C K+F+QK L H H G K
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG P+ C+ C K+F+QK L H H G K
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG 42
Score = 37.5 bits (88), Expect = 3e-04
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G P+ C+ C K+F+QK L H HTG
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 5e-04
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G P+ C+ C K+F+QK L H HTG
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37
Score = 35.2 bits (82), Expect = 0.002
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P+ C+ CGK F++K H++
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQR 33
Score = 28.7 bits (65), Expect = 0.42
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + S +P+ C CG+ + K L H H G P S
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 28.7 bits (65), Expect = 0.42
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + S +P+ C CG+ + K L H H G P S
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 5.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
+ C CGK + S L+AH +TH+ +P
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 5.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
+ C CGK + S L+AH +TH+ +P
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 8e-13
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GE+P KC+ CG + + S+HL +H R+HTGEKP +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 9e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GER KC+ CG + +HL +H +HTG++P S
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 6e-07
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGE+P++C CGK ++ + L H + H+ +P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQS-AHLIQHQRIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 1e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG +C+ CGK FI H+ +H+GEKP S+
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45
Score = 41.7 bits (99), Expect = 1e-05
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P C+ C KSF Q L++H IH G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P C+ C KSF Q L++H IH G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSG 42
Score = 37.5 bits (88), Expect = 3e-04
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P C+ C KSF Q L +H IHTG
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 5e-04
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P C+ C KSF Q L +H IHTG
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG+RPH+C+ CGK F + + H
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQH 31
Score = 27.9 bits (63), Expect = 1.1
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + RP C CG+ + L+ H +H G P S
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.1
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + RP C CG+ + L+ H +H G P S
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 8e-13
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP KC CG A +S +H R+HTG++P +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 49.1 bits (118), Expect = 3e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC CG A S +H +HTG RP S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 46.0 bits (110), Expect = 3e-07
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK F S H+ +H+G++P S+
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45
Score = 44.9 bits (107), Expect = 8e-07
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK S H + H+ RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDN-SSCTQHQRLHTGQRPSGPS 44
Score = 43.3 bits (103), Expect = 3e-06
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C CGK F ++S HQ +H+G+R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+F +H +H G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 34.9 bits (81), Expect = 0.003
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+F +H +H G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG 42
Score = 34.5 bits (80), Expect = 0.004
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K+F +H +HTG
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 33.7 bits (78), Expect = 0.007
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K+F +H +HTG
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG 37
Score = 32.6 bits (75), Expect = 0.023
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C CGK F + H++
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR 33
Score = 27.9 bits (63), Expect = 0.90
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + + H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 27.9 bits (63), Expect = 0.90
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + + H +H G P S
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 61.8 bits (151), Expect = 8e-13
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP +C CG A ++HL +H RVHTGEKP ++
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45
Score = 48.7 bits (117), Expect = 3e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C CG A + +HL +H VHTG++P S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 4e-07
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK F H+ VH+GEKP S+
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45
Score = 44.4 bits (106), Expect = 1e-06
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C CGK +T + L H + H+ +P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQT-THLIQHQRVHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 5e-06
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C CGK F T HQ VH+GE+
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 3e-05
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+F+Q L++H +H G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+F+Q L++H +H G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG 42
Score = 36.7 bits (86), Expect = 7e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K+F+Q L +H +HTG
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K+F+Q L +H +HTG
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37
Score = 34.0 bits (79), Expect = 0.006
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+EC CGK F++ + H++
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR 33
Score = 25.9 bits (58), Expect = 4.2
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C+ CG+ + L+ H +H G P S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.2
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C+ CG+ + L+ H +H G P S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 9e-13
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP KC+ CG +S+L RH R+HTGEKP +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 2e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG S+L+RH +HTG++P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 3e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
TG ++C+ CGK F H H+ +H+GEKP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 4e-07
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK R S L+ H + H+ +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHN-SYLSRHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 3e-06
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F H++ HQ +H+GE+
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 7e-05
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCH 92
+G P+ C+ C K F L +H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 9e-04
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K F L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K F L +H IH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG 42
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K F L +H IHTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37
Score = 34.4 bits (80), Expect = 0.004
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C+ CGK F H++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR 33
Score = 27.5 bits (62), Expect = 1.4
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C CG+ ++ L H +H G P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.4
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C CG+ ++ L H +H G P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 9e-13
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP KC C + S L H R+HTGEKP +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 2e-08
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KCD+C + S L H +HTG++P S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 6e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
TG ++CD+C K F + S +H+ +H+GEKP S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 1e-06
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C C K R S L H + H+ +P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYG-SSLTVHQRIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 2e-06
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C +C K F + +S HQ +H+GE+
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C+KSF L H IH G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++C VC K F + VH++
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C+KSF L H IHTG
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C+KSF L H IH G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C+KSF L H IHTG
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37
Score = 27.9 bits (63), Expect = 0.82
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C++C + ++ +L VH +H G P S
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 0.82
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C++C + ++ +L VH +H G P S
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.8
Identities = 9/42 (21%), Positives = 22/42 (52%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + + +P+ C++C + ++ +L VH +H+G P
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 1e-12
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP +C C A +HL +H + HTGEKP +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 49.5 bits (119), Expect = 2e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C +C A T K+HL +H HTG++P S
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 1e-07
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C C K + + L H +TH+ +P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQK-AHLAQHQKTHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 2e-06
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
TG ++C +C K F + H+ H+GEKP S
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 1e-05
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C +C K F HQ H+GE+
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 1e-05
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C+K+FTQK L +H H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C+K+FTQK L +H HTG
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 3e-04
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C+K+FTQK L +H H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG 42
Score = 36.7 bits (86), Expect = 6e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C+K+FTQK L +H HTG
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37
Score = 36.7 bits (86), Expect = 7e-04
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+EC VC K F +K + H+K
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK 33
Score = 27.5 bits (62), Expect = 1.1
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C++C + + K L H H G P S
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.1
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C++C + + K L H H G P S
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
+EC C K + + L H +TH+ +P
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
+EC C K + + L H +TH+ +P
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 1e-12
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC CG + HL +H RVHTGEKP ++
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45
Score = 51.0 bits (123), Expect = 6e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC CG + + HL +H VHTG++P S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 4e-07
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKP++C CGK + L H + H+ +P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQR-VHLTQHQRVHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 1e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG F+C CGK + + H+ VH+GEKP S+
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45
Score = 41.7 bits (99), Expect = 1e-05
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G PF C C KS+ Q++ L +H +H G K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G PF C C KS+ Q++ L +H +H G K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG 42
Score = 37.5 bits (88), Expect = 4e-04
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G PF C C KS+ Q+V L +H +HTG
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G PF C C KS+ Q+V L +H +HTG
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37
Score = 34.8 bits (81), Expect = 0.003
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P +C CGK + ++ + H++
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQR 33
Score = 27.5 bits (62), Expect = 1.5
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +PF C CG+ Y + L H +H G P S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.5
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +PF C CG+ Y + L H +H G P S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 1e-12
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP KCS CG + S L+ H + HTGE+ +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 51.0 bits (123), Expect = 6e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC CG + T KS L H HTG+R S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 45.6 bits (109), Expect = 5e-07
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK F + IH+ H+GE+ S+
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45
Score = 44.8 bits (107), Expect = 9e-07
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C+ CGK S L H + H+ R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWK-SRLRIHQKCHTGERHSGP 43
Score = 42.5 bits (101), Expect = 6e-06
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C CGK F + + HQ H+GER+
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C KSFT K L H H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ CS C KSFT K L+ H HTG
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ CS C KSFT K L+ H HTG
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37
Score = 36.7 bits (86), Expect = 6e-04
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P++CS CGK F K ++H+K
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33
Score = 36.7 bits (86), Expect = 7e-04
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C KSFT K L H H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSG 42
Score = 29.0 bits (66), Expect = 0.37
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + K L +H H G S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 29.0 bits (66), Expect = 0.37
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + K L +H H G S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 26.0 bits (58), Expect = 4.7
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
++C CGK + S L H + H+ R
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 26.0 bits (58), Expect = 4.7
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
++C CGK + S L H + H+ R
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 1e-12
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP +CS CG + S L H ++HTGEKP ++
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45
Score = 49.1 bits (118), Expect = 3e-08
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C ICG + T KS L+ H +HTG++P S
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 4e-07
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C+ CGK + S+L+ H Q H+ +P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKK-SQLHVHQQIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 7e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C +CGK F + ++H+ +H+GEKP S+
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45
Score = 42.5 bits (101), Expect = 5e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C +CGK F + HQ +H+GE+
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 3e-05
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C KSFT+K L H IH G K
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG++P+ECS+CGK F KK VH
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVH 31
Score = 36.7 bits (86), Expect = 6e-04
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ CS C KSFT+K L H IHTG
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C KSFT+K L H IH G K
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSG 42
Score = 36.4 bits (85), Expect = 8e-04
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ CS C KSFT+K L H IHTG
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37
Score = 27.9 bits (63), Expect = 0.82
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C ICG+ + K L VH +H G P S
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 0.82
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C ICG+ + K L VH +H G P S
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+EC CGK + S+L+ H Q H+ +P
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 8.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
+EC CGK + S+L+ H Q H+ +P
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 1e-12
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
+G KP C+ CG A S L H +HTGEKP
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 3e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+G + C+ CG A + S L H ++HTG++P S
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 2e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
TG + C+ CGK F S H+++H+GEKP S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 4e-07
Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TG KPY C CGK S L H H+ +P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVY-SSLTTHQVIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-06
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y C+ CGK F ++S HQ++H+GE+
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 3e-04
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G+ P+ C+ C K+F+ L H IH G K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG +P+ C+ CGK F+ + H+
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV 33
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G+ P+ C+ C K+F+ L H IHTG
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.005
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G+ P+ C+ C K+F+ L H IH G K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG 42
Score = 34.0 bits (79), Expect = 0.006
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G+ P+ C+ C K+F+ L H IHTG
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37
Score = 26.7 bits (60), Expect = 2.7
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + ++P++C CG+ + + +L H +H G P S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.7
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + ++P++C CG+ + + +L H +H G P S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 61.4 bits (150), Expect = 1e-12
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC CG S L H ++HTGEKP ++
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45
Score = 49.8 bits (120), Expect = 2e-08
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC CG + +S LN H +HTG++P S
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 1e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG F+C CGK F + + +H +H+GEKP S+
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45
Score = 45.2 bits (108), Expect = 6e-07
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKP++C CGK R S LN H + H+ +P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRR-SALNVHHKLHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 2e-06
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K ++C CGKGF ++ H +H+GE+
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 6e-05
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G PF C C K F+++ L H +H G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 4e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G PF C C K F+++ L H +HTG
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 6e-04
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G PF C C K F+++ L H +HTG
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G PF C C K F+++ L H +H G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG 42
Score = 34.0 bits (79), Expect = 0.005
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P +C CGK F+++ VH K
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK 33
Score = 29.0 bits (66), Expect = 0.38
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +PF C CG+G+ + AL VH +H G P S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.38
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +PF C CG+G+ + AL VH +H G P S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + + +PF C CG+G+ + AL VH +H+G P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 61.4 bits (150), Expect = 1e-12
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+G++P +C CG A + S L H R HTGEKP +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 49.5 bits (119), Expect = 2e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+G+R +C CG A TKS L H HTG++P S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 1e-07
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TG++PY+C CGK + S L H ++H+ +P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTK-SSLICHRRSHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 3e-07
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
TG ++C CGK F + S H+ H+GEKP S
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 3e-06
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G + Y+C CGK F +S H+ H+GE+
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+F K L+ H H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG RP+EC CGK F K + H++
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRR 33
Score = 36.7 bits (86), Expect = 7e-04
Identities = 12/41 (29%), Positives = 14/41 (34%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C C K+F K L H HTG
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 9e-04
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+F K L+ H H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSG 42
Score = 35.6 bits (83), Expect = 0.001
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C C K+F K L H HTG
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37
Score = 29.8 bits (68), Expect = 0.17
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + RP+ C CG+ +K K +L+ H H G P S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.17
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + RP+ C CG+ +K K +L+ H H G P S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TG+R +EC CGK ++T S L H ++H+ +P
Sbjct: 8 TGQRP-----YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+EC CGK ++T S L H ++H+ +P
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 1e-12
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP +CS CG A L H R+H+G+KP ++
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45
Score = 47.9 bits (115), Expect = 6e-08
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C +CG A + + L+ H +H+G +P S
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 46.4 bits (111), Expect = 3e-07
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C +CGK F H++S +H+ +HSG+KP S+
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45
Score = 46.0 bits (110), Expect = 3e-07
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C+ CGK L+ H + HS +P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHR-QSLSVHQRIHSGKKPSGPS 44
Score = 44.0 bits (105), Expect = 2e-06
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C +CGK F H S HQ +HSG++
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 38.6 bits (91), Expect = 1e-04
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+F+ + L H IH+G K
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 36.7 bits (86), Expect = 6e-04
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+ECSVCGK F+ + + VH++
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR 33
Score = 35.6 bits (83), Expect = 0.002
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ CS C K+F+ + L H IH+G
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+F+ + L H IH+G K
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ CS C K+F+ + L H IH+G
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37
Score = 26.3 bits (59), Expect = 3.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C +CG+ + +++L VH +H+G P S
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 26.3 bits (59), Expect = 3.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C +CG+ + +++L VH +H+G P S
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 25.5 bits (57), Expect = 6.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
+EC CGK + L+ H + HS +P
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 25.5 bits (57), Expect = 6.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
+EC CGK + L+ H + HS +P
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 61.0 bits (149), Expect = 1e-12
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+G+KP +C+ CG + + +L H R+HTGEK +
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+G++ +C CG + K +L H +HTG++ S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 45.6 bits (109), Expect = 4e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG F+C CGK F + + H+ +H+GEK S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG 45
Score = 44.8 bits (107), Expect = 7e-07
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TG+KP++CT CGK R L H + H+ +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAK-GNLVTHQRIHTGEKSGPS 43
Score = 42.5 bits (101), Expect = 6e-06
Identities = 16/41 (39%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G PF C C KSF K LV H IH G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 42.1 bits (100), Expect = 7e-06
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K ++C CGK F + HQ +H+GE++
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 38.7 bits (91), Expect = 1e-04
Identities = 16/40 (40%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G PF C C KSF K LV H IH G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP 42
Score = 38.7 bits (91), Expect = 1e-04
Identities = 15/41 (36%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G PF C+ C KSF K L H IHTG
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 37.1 bits (87), Expect = 4e-04
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G PF C+ C KSF K L H IHTG
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG +P EC+ CGK F K N H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31
Score = 29.0 bits (66), Expect = 0.31
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +PF C CG+ ++ K L+ H +H G S
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 29.0 bits (66), Expect = 0.31
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +PF C CG+ ++ K L+ H +H G S
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 25.6 bits (57), Expect = 5.7
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TG++ EC CGK +R L H + H+ +
Sbjct: 8 TGQKP-----FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 25.6 bits (57), Expect = 7.0
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 6 ECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
EC CGK +R L H + H+ +
Sbjct: 14 ECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 61.0 bits (149), Expect = 2e-12
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
GE+ +CS CG L +S+ +H R+HTGEKP ++
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45
Score = 48.7 bits (117), Expect = 4e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
GER +C CG S+ +H +HTG++P S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 2e-07
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
G +C CGK F+ +F H+ +H+GEKP S+
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45
Score = 43.3 bits (103), Expect = 3e-06
Identities = 10/38 (26%), Positives = 23/38 (60%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
+ +G + ++C CGK F+ +++ H+ +H+GE+
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 41.0 bits (97), Expect = 2e-05
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
GE+ ++C+ CGK + S H + H+ +P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQA-SNFIQHRRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 5e-05
Identities = 11/41 (26%), Positives = 13/41 (31%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
G C C K F Q ++H IH G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 1e-04
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G CS C K F Q +H IHTG
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 38.7 bits (91), Expect = 1e-04
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
+G CS C K F Q +H IHTG
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 37.9 bits (89), Expect = 2e-04
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
G C C K F Q ++H IH G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS 41
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
G+R H CS CGK F + N H++
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRR 33
Score = 30.6 bits (70), Expect = 0.10
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ R C CG+ + + H +H G P S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.10
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ R C CG+ + + H +H G P S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.41
Identities = 8/41 (19%), Positives = 14/41 (34%)
Query: 497 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
+ R C CG+ + + H +H+G P
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 61.0 bits (149), Expect = 2e-12
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
GEK KC C + +S L+ H VH GEKP ++
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45
Score = 48.7 bits (117), Expect = 3e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
GE+ KC C + + S L H VH G++P S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 45.2 bits (108), Expect = 7e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
G ++C C F S +H+ VH GEKP S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 42.5 bits (101), Expect = 5e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K ++C C F +S + HQ VH GE+
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 42.1 bits (100), Expect = 7e-06
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
GEK ++C C + S L H H +P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQA-SSLRLHQNVHVGEKPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
G + C C+ F+Q L H N+H G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.9 bits (89), Expect = 3e-04
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G + C C+ F+Q L+ H +H G
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37
Score = 37.9 bits (89), Expect = 3e-04
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
G + C C+ F+Q L+ H +H G
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37
Score = 36.8 bits (86), Expect = 6e-04
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
G + C C+ F+Q L H N+H G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 5/31 (16%), Positives = 14/31 (45%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
G++ +C C F++ + ++H+
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN 33
Score = 28.7 bits (65), Expect = 0.55
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + + C C + +L +H +H G P S
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 28.7 bits (65), Expect = 0.55
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + + C C + +L +H +H G P S
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 2e-12
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GE+ +CS CG A S L H R+HTGEKP ++
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45
Score = 50.2 bits (121), Expect = 1e-08
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GER+ +C CG A KS L H +HTG++P S
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 3e-07
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGE+ Y+C+ CGK R S L H + H+ +P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARK-STLIMHQRIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 3e-07
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK F + + +H+ +H+GEKP S+
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45
Score = 42.9 bits (102), Expect = 5e-06
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G + Y+C CGK F ++ HQ +H+GE+
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 3e-05
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G + C C K+F +K L+ H IH G K
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG+R +ECS CGK FA+K +H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH 31
Score = 36.7 bits (86), Expect = 6e-04
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G + C C K+F +K L+ H IH G K
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSG 42
Score = 36.7 bits (86), Expect = 7e-04
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G + CS C K+F +K L H IHTG
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.001
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G + CS C K+F +K L H IHTG
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37
Score = 29.4 bits (67), Expect = 0.28
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + R + C CG+ + K L++H +H G P S
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.28
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + R + C CG+ + K L++H +H G P S
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.4
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGER +EC CGK + S L H + H+ +P
Sbjct: 8 TGERH-----YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 8.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+EC CGK + S L H + H+ +P
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 2e-12
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP +CS C A + S+L H R HTGEKP ++
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45
Score = 48.2 bits (116), Expect = 6e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C C A TKS+L H HTG++P S
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 3e-07
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKP++C+ C K S L H +TH+ +P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTK-SNLIVHQRTHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 5e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG F+C C K F + + +H+ H+GEKP S+
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45
Score = 41.7 bits (99), Expect = 1e-05
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K ++C C K F ++ HQ H+GE+
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 5e-05
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G PF C C K+F K L+ H H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 6e-04
Identities = 14/41 (34%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G PF CS C K+F K L H HTG
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 6e-04
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG++P ECS C K F K N VH
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVH 31
Score = 35.9 bits (84), Expect = 0.001
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G PF C C K+F K L+ H H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG 42
Score = 35.5 bits (83), Expect = 0.001
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G PF CS C K+F K L H HTG
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37
Score = 29.4 bits (67), Expect = 0.24
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +PF C C + + K L+VH H G P S
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.24
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +PF C C + + K L+VH H G P S
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.9
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
TGE+ EC C K + T S L H +TH+ +P
Sbjct: 8 TGEKP-----FECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 6.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
EC C K + T S L H +TH+ +P
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 2e-12
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+G K +C+ CG A S L H ++HTGEKP +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 1e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+G ++ +C CG A T KS L+ H +HTG++P S
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 4e-07
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TG K ++CT CGK R S L+ H + H+ +P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRK-STLSMHQKIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 9e-07
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
TG F+C CGK F + + +H+ +H+GEKP S
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 6e-06
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K ++C CGK F ++ HQ +H+GE+
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 5e-05
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G F C C K+FT+K L H IH G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G F C+ C K+FT+K L H IHTG
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 9e-04
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G F C C K+FT+K L H IH G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG 42
Score = 36.3 bits (85), Expect = 0.001
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G F C+ C K+FT+K L H IHTG
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG + EC+ CGK F +K +H+K
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK 33
Score = 28.3 bits (64), Expect = 0.61
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + + F C CG+ + K L +H +H G P S
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 0.61
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + + F C CG+ + K L +H +H G P S
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 7.4
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
TG + EC CGK + S L+ H + H+ +P
Sbjct: 8 TGGKH-----FECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
EC CGK + S L+ H + H+ +P
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 2e-12
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GE+ +CS CG A + S L H R+H GEKP +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GER+ +C CG A KS L+ H +H G++P S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 46.4 bits (111), Expect = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK FI + + +H+ +H GEKP S+
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45
Score = 44.4 bits (106), Expect = 1e-06
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGE+ Y+C+ CGK + S L+ H + H +P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQK-STLSMHQRIHRGEKPSGP 43
Score = 43.3 bits (103), Expect = 3e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G + Y+C CGK FI ++ HQ +H GE+
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G + C C K+F QK L H IH G K
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 36.7 bits (86), Expect = 6e-04
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G + CS C K+F QK L H IH G
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G + C C K+F QK L H IH G K
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG 42
Score = 36.3 bits (85), Expect = 8e-04
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G + CS C K+F QK L H IH G
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG+R +ECS CGK F +K +H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMH 31
Score = 27.9 bits (63), Expect = 0.98
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + R + C CG+ + K L +H +H G P S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 27.9 bits (63), Expect = 0.98
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + R + C CG+ + K L +H +H G P S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 25.6 bits (57), Expect = 7.2
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGER +EC CGK + S L+ H + H +P
Sbjct: 8 TGERH-----YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 2e-12
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP KC+ CG A + S L H H+GEKP +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 48.7 bits (117), Expect = 4e-08
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC+ CG A +S L H H+G++P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 46.8 bits (112), Expect = 2e-07
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK F + S IH+ HSGEKP S+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45
Score = 46.4 bits (111), Expect = 2e-07
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C CGK R S L H THS +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAR-SSLAIHQATHSGEKPSGP 43
Score = 44.1 bits (105), Expect = 2e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F +S HQ HSGE+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K+F + L H H+G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K+F + L H H+G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
TG++P++C+ CGK F + + +H+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQ 32
Score = 34.4 bits (80), Expect = 0.004
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K+F + L H H+G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSG 42
Score = 34.4 bits (80), Expect = 0.004
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K+F + L H H+G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37
Score = 27.1 bits (61), Expect = 1.9
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C CG+ ++ + +L +H H+G P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.9
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C CG+ ++ + +L +H H+G P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.2
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 23 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + +P+ C CG+ ++ + +L +H HSG P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.3
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGE+ ++C CGK +R S L H THS +P
Sbjct: 8 TGEKP-----YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 26.0 bits (58), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
++C CGK +R S L H THS +P
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 2e-12
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP +C+ CG A S+L H ++HTGEKP ++
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45
Score = 50.6 bits (122), Expect = 7e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C CG A T +S+L H +HTG++P S
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 3e-07
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK F + + + H+ +H+GEKP S+
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45
Score = 44.4 bits (106), Expect = 1e-06
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK S L H + H+ +P
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDR-SNLFTHQKIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 8e-06
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C CGK F ++ HQ +H+GE+
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 6e-05
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+FT + L H IH G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 5e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K+FT + L H IHTG
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K+FT + L H IHTG
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37
Score = 35.9 bits (84), Expect = 0.001
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+FT + L H IH G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG 42
Score = 34.8 bits (81), Expect = 0.004
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+ C+ CGK F + N H+K
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK 33
Score = 28.6 bits (65), Expect = 0.49
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + + L H +H G P S
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.49
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + + L H +H G P S
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 9.5
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
TGE+ + C CGK + S L H + H+ +P
Sbjct: 8 TGEKP-----YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 2e-12
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP +CS CG + + S L H R+HTGE P ++
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45
Score = 50.6 bits (122), Expect = 7e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C CG + KS L+ H +HTG+ P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 46.0 bits (110), Expect = 4e-07
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK FI + ++H+ +H+GE P S+
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45
Score = 45.6 bits (109), Expect = 5e-07
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C+ CGK + S+L+ H + H+ P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKK-SQLHVHQRIHTGENPSGP 43
Score = 42.9 bits (102), Expect = 4e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C CGK FI + HQ +H+GE
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C KSF +K L H IH G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG++P+ECS CGK F KK VH
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVH 31
Score = 36.8 bits (86), Expect = 6e-04
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ CS C KSF +K L H IHTG
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 36.4 bits (85), Expect = 8e-04
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C KSF +K L H IH G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG 42
Score = 36.4 bits (85), Expect = 8e-04
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ CS C KSF +K L H IHTG
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37
Score = 29.4 bits (67), Expect = 0.30
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P+ C CG+ + K L VH +H G NP S
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 29.4 bits (67), Expect = 0.30
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P+ C CG+ + K L VH +H G NP S
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 26.0 bits (58), Expect = 4.8
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGE+ +EC CGK + S+L+ H + H+ P
Sbjct: 8 TGEKP-----YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 25.6 bits (57), Expect = 5.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+EC CGK + S+L+ H + H+ P
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 61.6 bits (150), Expect = 2e-12
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 443 VHSGEKPIKCS--ACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQT 500
V +P C +C S L RH R+HTG+KP+QC C + R+ L HI+T
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRS-DHLTTHIRT 71
Query: 501 HS 502
H+
Sbjct: 72 HT 73
Score = 53.5 bits (129), Expect = 2e-09
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 461 SSSHLKRHFRVHTGEKPYQCT--TCGKRLRRTVSELNAHIQTHSDLRPFVCEICG 513
++L + V +PY C +C +R R+ EL HI+ H+ +PF C IC
Sbjct: 5 PMNNLLNY--VVPKMRPYACPVESCDRRFSRS-DELTRHIRIHTGQKPFQCRICM 56
Score = 48.8 bits (117), Expect = 7e-08
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 414 PIHTGSTRFQCDL--CGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRV 471
+ + C + C +RF H +H+G+KP +C C S HL H R
Sbjct: 12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71
Query: 472 HT 473
HT
Sbjct: 72 HT 73
Score = 45.4 bits (108), Expect = 1e-06
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 110 VHSGERNVKCDI--CGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
V R C + C + L RH+ +HTG +P +C +C + F++ + H +
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70
Score = 44.2 bits (105), Expect = 3e-06
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 265 SELNAHIQTHSDLRPFVC--EICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVG 322
+ L ++ RP+ C E C + + L H+ +H G PF C C ++F++
Sbjct: 7 NNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 323 LQKHLPIHT 331
L H+ HT
Sbjct: 65 LTTHIRTHT 73
Score = 44.2 bits (105), Expect = 3e-06
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 351 SELNAHIQTHSDLRPFVC--EICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVG 408
+ L ++ RP+ C E C + + L H+ +H G PF C C ++F++
Sbjct: 7 NNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 409 LQKHLPIHT 417
L H+ HT
Sbjct: 65 LTTHIRTHT 73
Score = 42.3 bits (100), Expect = 1e-05
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 18 SELNAHIQTHSDLRPFVC--EICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIG 75
+ L ++ RP+ C E C + + L H+ +H+G PF C C ++F++
Sbjct: 7 NNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 76 LVKHLNIH 83
L H+ H
Sbjct: 65 LTTHIRTH 72
Score = 41.9 bits (99), Expect = 2e-05
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 54 MHSGIHPFTCH--FCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVH 111
+ + P+ C C++ F++ L +H+ IH G K +QC +C + F H H
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Query: 112 S 112
+
Sbjct: 73 T 73
Score = 41.5 bits (98), Expect = 3e-05
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 82 IHNGTKKYQCHL--CGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVH 139
+ + Y C + C + F H +H+G++ +C IC + HL H+ H
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Query: 140 T 140
T
Sbjct: 73 T 73
Score = 33.4 bits (77), Expect = 0.020
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICG 286
R P +C +++ EL HI+ H+ +PF C IC
Sbjct: 15 PKMR---PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICM 56
Score = 33.0 bits (76), Expect = 0.029
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 8 PTCGKKWRTVSELNAHIQTHSDLRPFVCEICG 39
+C +++ EL HI+ H+ +PF C IC
Sbjct: 25 ESCDRRFSRSDELTRHIRIHTGQKPFQCRICM 56
Score = 30.4 bits (69), Expect = 0.21
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 301 MHNGINPFTCS--FCNKSFTQKVGLQKHLPIHTGSTRFQ 337
+ + P+ C C++ F++ L +H+ IHTG FQ
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ 51
Score = 28.8 bits (65), Expect = 0.79
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 528 MHSGIHPFTCH--FCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+ + P+ C C++ F++ L +H+ IH G K +Q
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ 51
Score = 28.4 bits (64), Expect = 1.1
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Query: 130 SHLNRHMLVHTGDRPHECSV--CGKRFA 155
++L ++ RP+ C V C +RF+
Sbjct: 7 NNLLNYV--VPKMRPYACPVESCDRRFS 32
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 2e-12
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP +C+ CG A S L H +HTG+KP +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 49.1 bits (118), Expect = 3e-08
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C+ CG A + +S L H +HTG +P S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 45.6 bits (109), Expect = 5e-07
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKPY+C CGK S L H H+ +P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVR-SSLTTHQAIHTGKKPSGPS 44
Score = 45.2 bits (108), Expect = 5e-07
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C+ CGK F + S H+ +H+G+KP S+
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45
Score = 44.1 bits (105), Expect = 1e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ CGK F +S HQ +H+G++
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K+F+ + L H IH G K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+EC+ CGK F+ + + H+
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA 33
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K+F+ + L H IHTG
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K+F+ + L H IH G K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG 42
Score = 34.0 bits (79), Expect = 0.005
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K+F+ + L H IHTG
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37
Score = 26.3 bits (59), Expect = 3.9
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P+ C CG+ + ++ +L H +H G P S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 26.3 bits (59), Expect = 3.9
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P+ C CG+ + ++ +L H +H G P S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 3e-12
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
+GE+P C+ CG A S+L +H ++HTGEKP
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 51.3 bits (124), Expect = 4e-09
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GER C +CG A T +S+L +H +HTG++P S
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 9e-07
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGE+PY CT CGK S L H + H+ +P
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDR-SNLIKHQKIHTGEKPSGP 43
Score = 43.6 bits (104), Expect = 3e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG + C +CGK F + + H+ +H+GEKP S+
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45
Score = 41.3 bits (98), Expect = 1e-05
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G + Y C +CGK F ++ HQ +H+GE+
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 3e-05
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C C K+FT + L+KH IH G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 5e-04
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG+RP+ C+VCGK F + N H+K
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK 33
Score = 37.1 bits (87), Expect = 5e-04
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C C K+FT + L+KH IH G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSG 42
Score = 37.1 bits (87), Expect = 5e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K+FT + L KH IHTG
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37
Score = 37.1 bits (87), Expect = 5e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
G P+ C+ C K+FT + L KH IHTG
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37
Score = 29.0 bits (66), Expect = 0.33
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + RP++C +CG+ + + L+ H +H G P S
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.33
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + RP++C +CG+ + + L+ H +H G P S
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 60.6 bits (148), Expect = 3e-12
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 439 IHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
+GEKP +C+ C A + S+L H R HTGE
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 48.2 bits (116), Expect = 6e-08
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHEC 147
+GE+ +C+ C A TKS+L H HTG+
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 45.5 bits (109), Expect = 5e-07
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKPY+C C K S L H +TH+
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTK-SNLMVHQRTHTGESGPSS 43
Score = 42.1 bits (100), Expect = 8e-06
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKC 452
TG ++C+ C K F + + +H+ H+GE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 40.9 bits (97), Expect = 2e-05
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y+C+ C K F ++ HQ H+GE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 40.5 bits (96), Expect = 3e-05
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P+ C+ C K+F K L+ H H G
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 37.8 bits (89), Expect = 2e-04
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P+ C+ C K+F K L H HTG +
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 37.5 bits (88), Expect = 4e-04
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P+EC+ C K F K N VH++
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQR 33
Score = 37.1 bits (87), Expect = 5e-04
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P+ C+ C K+F K L+ H H G
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS 42
Score = 36.7 bits (86), Expect = 7e-04
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P+ C+ C K+F K L H HTG
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37
Score = 27.4 bits (62), Expect = 1.4
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 310
+ + + +P+ C C + + K L+VH H G + +
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 27.4 bits (62), Expect = 1.4
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 396
+ + + +P+ C C + + K L+VH H G + +
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 25.9 bits (58), Expect = 3.8
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGE+ +EC C K + T S L H +TH+
Sbjct: 8 TGEKP-----YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 25.9 bits (58), Expect = 3.9
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+EC C K + T S L H +TH+
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 60.2 bits (147), Expect = 3e-12
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPY 478
GEKP KC CG + +HL+ H +HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 47.1 bits (113), Expect = 1e-07
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPH 145
GE+ KC+ CG +HL H+L+HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 44.4 bits (106), Expect = 1e-06
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTH 501
GEKPY+C TCG R + + L AH+ H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQV-AHLRAHVLIH 34
Score = 41.0 bits (97), Expect = 2e-05
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G G P+ C C F Q L+ H+ IHTG
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 41.0 bits (97), Expect = 2e-05
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
G G P+ C C F Q L+ H+ IHTG
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 41.0 bits (97), Expect = 2e-05
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
G K Y+C CG F+ + H L+H+G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 40.6 bits (96), Expect = 2e-05
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKP 449
G ++C+ CG RF+ H ++H+G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP 39
Score = 39.8 bits (94), Expect = 4e-05
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 89
G G P+ C C F Q L H+ IH G+
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 39.8 bits (94), Expect = 4e-05
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
G G P+ C C F Q L H+ IH G+
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 36.0 bits (84), Expect = 0.001
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
G++P++C CG RF + + + H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHV 31
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.2 bits (147), Expect = 3e-12
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GE P CS CG ++L H ++HTGE+P ++
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS 45
Score = 50.6 bits (122), Expect = 9e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE C CG T K++L H +HTG+RP S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG F C CGK F H+ + IH+ +H+GE+P S+
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS 45
Score = 44.8 bits (107), Expect = 1e-06
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGE P+ C+ CGK + L H + H+ RP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHK-TNLIIHQKIHTGERPSGP 43
Score = 44.0 bits (105), Expect = 2e-06
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G + C CGK F H T+ HQ +H+GER
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 40.9 bits (97), Expect = 2e-05
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G +PF C C K FT K L+ H IH G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 38.2 bits (90), Expect = 2e-04
Identities = 17/41 (41%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G NPF CS C K FT K L H IHTG
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 17/35 (48%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G NPF CS C K FT K L H IHTG
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37
Score = 37.5 bits (88), Expect = 4e-04
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G +PF C C K FT K L+ H IH G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG 42
Score = 36.7 bits (86), Expect = 6e-04
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG+ P CS CGK F K N +H+K
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQK 33
Score = 31.3 bits (72), Expect = 0.064
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + PF+C CG+ + K L++H +H G P S
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 31.3 bits (72), Expect = 0.064
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + PF+C CG+ + K L++H +H G P S
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 26.3 bits (59), Expect = 3.0
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGE C CGK + + L H + H+ RP
Sbjct: 8 TGENP-----FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 25.5 bits (57), Expect = 5.7
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
C CGK + + L H + H+ RP
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.9 bits (146), Expect = 4e-12
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+GEKP +C CG + +S L H R+HTGE P +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 47.5 bits (114), Expect = 1e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C CG + + S L H +HTG+ P S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 45.6 bits (109), Expect = 5e-07
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKP++C CGK S+L H + H+ P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFN-SQLIVHQRIHTGENPSGP 43
Score = 45.2 bits (108), Expect = 5e-07
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG +C CGK F +H+ +H+GE P S+
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45
Score = 42.9 bits (102), Expect = 4e-06
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K ++C CGK F ++ HQ +H+GE
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 39.8 bits (94), Expect = 5e-05
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P C C KSF+ L+ H IH G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P C C KSF+ L+ H IH G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSG 42
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG++PHEC CGK F+ VH
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVH 31
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/41 (31%), Positives = 14/41 (34%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P C C KSF+ L H IHTG
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/35 (37%), Positives = 14/35 (40%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P C C KSF+ L H IHTG
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37
Score = 28.7 bits (65), Expect = 0.53
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + +P C CG+ + L+VH +H G NP S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 28.7 bits (65), Expect = 0.53
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + +P C CG+ + L+VH +H G NP S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 27.1 bits (61), Expect = 1.8
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 23 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + +P C CG+ + L+VH +H+G +P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 26.0 bits (58), Expect = 4.4
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGE+ HEC CGK + S+L H + H+ P
Sbjct: 8 TGEKP-----HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 25.2 bits (56), Expect = 7.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
HEC CGK + S+L H + H+ P
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 59.8 bits (146), Expect = 4e-12
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
+G KP C+ CG A S S+L H R HTGE
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 47.9 bits (115), Expect = 8e-08
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TG KPY C CGK R S L H +TH+
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSK-SYLIIHTRTHTGESGPSS 43
Score = 47.1 bits (113), Expect = 1e-07
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHEC 147
+G + C+ CG A +KS+L H HTG+
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 42.1 bits (100), Expect = 9e-06
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y C+ CGK F + H H+GE
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 42.1 bits (100), Expect = 9e-06
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKC 452
TG + C+ CGK F + IH H+GE
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 38.2 bits (90), Expect = 2e-04
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G+ P+ C+ C K+F K L+ H H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 5e-04
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
TG +P+ C+ CGK F K +H
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHT 32
Score = 35.9 bits (84), Expect = 0.001
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G+ P+ C+ C K+F K L H HTG +
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G+ P+ C+ C K+F K L+ H H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS 42
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G+ P+ C+ C K+F K L H HTG
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37
Score = 28.2 bits (64), Expect = 0.64
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + + ++P+VC CG+ ++ K L++H H+G +
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 27.8 bits (63), Expect = 0.88
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 310
+ + + ++P+VC CG+ ++ K L++H H G + +
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 27.8 bits (63), Expect = 0.88
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 396
+ + + ++P+VC CG+ ++ K L++H H G + +
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 26.7 bits (60), Expect = 2.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+ C CGK +R+ S L H +TH+
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 26.7 bits (60), Expect = 2.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
+ C CGK +R+ S L H +TH+
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.9 bits (146), Expect = 4e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
SG+KP +C C + HL +H RVHTGE+
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 49.8 bits (120), Expect = 2e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SG++ +C C HLN+H VHTG+R S
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 44.8 bits (107), Expect = 9e-07
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
+G+KPY+C C K + LN H + H+ R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQI-GHLNQHKRVHTGERSSGPS 44
Score = 42.1 bits (100), Expect = 8e-06
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
+G ++C C K FI HK VH+GE+ S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 39.8 bits (94), Expect = 6e-05
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG P+ C C K+F Q L +H +H G +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G P+ C C K+F Q L +H +HTG
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 36.4 bits (85), Expect = 8e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G P+ C C K+F Q L +H +HTG
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG P+ C C K+F Q L +H +H G +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG 42
Score = 33.7 bits (78), Expect = 0.009
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G +P+EC C K F + + HK+
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKR 33
Score = 27.1 bits (61), Expect = 1.5
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + S +P+ C+ C + + L H +H G S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 27.1 bits (61), Expect = 1.5
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + S +P+ C+ C + + L H +H G S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 27.1 bits (61), Expect = 2.0
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
+G++ +EC C K + + LN H + H+ R
Sbjct: 8 SGKKP-----YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 26.7 bits (60), Expect = 2.1
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
+EC C K + + LN H + H+ R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 26.7 bits (60), Expect = 2.6
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 496 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
+ + S +P+ C+ C + + L H +H+G
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.8 bits (146), Expect = 4e-12
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GE P +C CG A L H R H GEKP ++
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45
Score = 47.5 bits (114), Expect = 1e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE +C CG A + K L H H G++P S
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 46.0 bits (110), Expect = 4e-07
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGE PY+C CGK R +L +H +TH+ +P
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRK-YQLISHQRTHAGEKPSGP 43
Score = 44.0 bits (105), Expect = 2e-06
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG ++C CGK F + H+ H+GEKP S+
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45
Score = 41.7 bits (99), Expect = 1e-05
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 50 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G +P+ CH C K+F++K L+ H H G K
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 41.7 bits (99), Expect = 1e-05
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G Y+CH CGK F HQ H+GE+
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 524 VHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G +P+ CH C K+F++K L+ H H G K
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSG 42
Score = 36.7 bits (86), Expect = 6e-04
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG+ P+EC CGK F++K+ H++
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR 33
Score = 36.3 bits (85), Expect = 0.001
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 383 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G NP+ C C K+F++K L H H G
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.001
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 297 VHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G NP+ C C K+F++K L H H G
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + P+ C CG+ + K L+ H H G P S
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + P+ C CG+ + K L+ H H G P S
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 25.5 bits (57), Expect = 7.4
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGE +EC CGK + +L +H +TH+ +P
Sbjct: 8 TGENP-----YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 25.2 bits (56), Expect = 9.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+EC CGK + +L +H +TH+ +P
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 59.9 bits (146), Expect = 4e-12
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 443 VHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
SGEKP CS C A S S+L H + H EKP ++
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43
Score = 46.8 bits (112), Expect = 2e-07
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 110 VHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE+ C C A ++KS+L H H ++P S
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 45.2 bits (108), Expect = 7e-07
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 415 IHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G F C C K F + +H+ H+ EKP S+
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43
Score = 42.5 bits (101), Expect = 5e-06
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 470 RVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GEKP+ C+ C K S L H QTH++ +P
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSK-SYLLVHQQTHAEEKPSGP 41
Score = 41.4 bits (98), Expect = 2e-05
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG PF C C K+F+ K L+ H H K
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 39.8 bits (94), Expect = 5e-05
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 82 IHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+G K + C C K F + HQ H+ E+
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 38.3 bits (90), Expect = 2e-04
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G PF CS C K+F+ K L H H
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 37.5 bits (88), Expect = 3e-04
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG PF C C K+F+ K L+ H H K
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG 40
Score = 37.5 bits (88), Expect = 3e-04
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G PF CS C K+F+ K L H H
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 138 VHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P CS C K F+ K VH++
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQ 31
Score = 30.2 bits (69), Expect = 0.13
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 273 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
S +PF C C + + K LLVH H P S
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 30.2 bits (69), Expect = 0.13
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 359 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
S +PF C C + + K LLVH H P S
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 28.7 bits (65), Expect = 0.49
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 26 THSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
S +PF C C + + K LLVH H+ P
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 28.7 bits (65), Expect = 0.49
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 500 THSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
S +PF C C + + K LLVH H+ P
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 27.9 bits (63), Expect = 0.86
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
+GE+ C C K + + S L H QTH++ +P
Sbjct: 6 SGEKP-----FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 27.1 bits (61), Expect = 1.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
C C K + + S L H QTH++ +P
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 59.5 bits (145), Expect = 6e-12
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+G KP CS C S L H R HTG KP ++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS 45
Score = 47.5 bits (114), Expect = 1e-07
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+G + C C + KS L H HTG +P S
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 46.4 bits (111), Expect = 3e-07
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TG KPY C+ C K S+L H ++H+ ++P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLK-SQLIVHQRSHTGVKPSGP 43
Score = 45.6 bits (109), Expect = 5e-07
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG + C C K F + +H+ H+G KP S+
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS 45
Score = 42.1 bits (100), Expect = 8e-06
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K Y C C K F + HQ H+G +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G+ P+ C C K+F+ K L+ H H G K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 37.9 bits (89), Expect = 3e-04
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
TG +P+ CS C K F+ K VH
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31
Score = 36.7 bits (86), Expect = 6e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G+ P+ CS C K+F+ K L H HTG
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G+ P+ C C K+F+ K L+ H H G K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSG 42
Score = 36.0 bits (84), Expect = 0.001
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G+ P+ CS C K+F+ K L H HTG
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37
Score = 30.6 bits (70), Expect = 0.087
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + ++P+ C C + + +K L+VH H G+ P S
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 30.6 bits (70), Expect = 0.087
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + ++P+ C C + + +K L+VH H G+ P S
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 29.4 bits (67), Expect = 0.25
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + + ++P+ C C + + +K L+VH H+G+ P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 26.0 bits (58), Expect = 4.9
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+ C C K + S+L H ++H+ ++P
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 26.0 bits (58), Expect = 4.9
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
+ C C K + S+L H ++H+ ++P
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 59.5 bits (145), Expect = 6e-12
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP KC+ CG A S L H R H +K ++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS 45
Score = 48.7 bits (117), Expect = 4e-08
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ KC CG A KS L H H D+ S
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 44.5 bits (106), Expect = 1e-06
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG +C CGK F + +H+ H +K S+
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS 45
Score = 44.1 bits (105), Expect = 2e-06
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKP +CT CGK S+L H +TH D +
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWK-SQLIMHQRTHVDDKHSGP 43
Score = 40.2 bits (95), Expect = 3e-05
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G K +C CGK F + HQ H +++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G P C C K+F K L+ H H K
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 10/37 (27%), Positives = 12/37 (32%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G P C+ C K+F K L H H
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G P C+ C K+F K L H H
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVD 37
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G P C C K+F K L+ H H K
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P +C+ CGK F K +H++
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR 33
Score = 31.4 bits (72), Expect = 0.058
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +P C CG+ + K L++H H S
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 31.4 bits (72), Expect = 0.058
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +P C CG+ + K L++H H S
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 29.8 bits (68), Expect = 0.17
Identities = 8/42 (19%), Positives = 16/42 (38%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + + +P C CG+ + K L++H H
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 29.8 bits (68), Expect = 0.17
Identities = 8/42 (19%), Positives = 16/42 (38%)
Query: 496 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
+ + + +P C CG+ + K L++H H
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 27.5 bits (62), Expect = 1.4
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGE+ +C CGK + S+L H +TH D +
Sbjct: 8 TGEKP-----CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 27.1 bits (61), Expect = 1.6
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+C CGK + S+L H +TH D +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 59.5 bits (145), Expect = 7e-12
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCT 481
+G P KCS C + L H R+HT EKP +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 47.9 bits (115), Expect = 8e-08
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+G KC C + + K L H +HT ++P S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCS 453
G ++C C K F + +H+ +H+ EKP S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 41.8 bits (99), Expect = 1e-05
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G Y+C C K F HQ +H+ E+
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 40.6 bits (96), Expect = 3e-05
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
G PY+C+ C K L H + H+ +P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGK-LRLLVHQRMHTREKPSGP 43
Score = 40.2 bits (95), Expect = 4e-05
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G++P+ C C KSF+ K+ L+ H +H K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
G+NP+ CS C KSF+ K+ L H +HT
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G+NP+ CS C KSF+ K+ L H +HT
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR 37
Score = 36.7 bits (86), Expect = 6e-04
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G++P+ C C KSF+ K+ L+ H +H K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
G P++CS C K F+ K VH++
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR 33
Score = 31.4 bits (72), Expect = 0.060
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + + P+ C C + + K LLVH MH P S
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 31.4 bits (72), Expect = 0.060
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + + P+ C C + + K LLVH MH P S
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 29.8 bits (68), Expect = 0.20
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + + + P+ C C + + K LLVH MH+ P
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 29.8 bits (68), Expect = 0.20
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 496 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
+ + + + P+ C C + + K LLVH MH+ P
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 59.1 bits (144), Expect = 8e-12
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
S K +C CG SHL +H R+HTGEKP ++
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 45
Score = 50.2 bits (121), Expect = 1e-08
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
S ++ +C CG T KSHLN+H +HTG++P S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 3e-06
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+ + QC CG+ F + H+ +H+GEKP S+
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 45
Score = 41.8 bits (99), Expect = 1e-05
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+ K +QC CG+ S LN H + H+ +P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLK-SHLNQHQRIHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 1e-04
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
S CH C + FT K L +H IH G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+ C C + FT K L +H IHTG
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 37.9 bits (89), Expect = 2e-04
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
+ C C + FT K L +H IHTG
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 37.1 bits (87), Expect = 4e-04
Identities = 13/39 (33%), Positives = 15/39 (38%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
S CH C + FT K L +H IH G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPS 41
Score = 34.4 bits (80), Expect = 0.004
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+ + H+C CG+ F K + H++
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR 33
Score = 31.0 bits (71), Expect = 0.072
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ S + C CG+G+ +K L H +H G P S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 31.0 bits (71), Expect = 0.072
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ S + C CG+G+ +K L H +H G P S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.23
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 23 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ S + C CG+G+ +K L H +H+G P
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.23
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 497 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
+ S + C CG+G+ +K L H +H+G P
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 59.1 bits (144), Expect = 8e-12
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFR-VHTGEKPYQCTT 482
+G+KP +C CG A + ++ L RH+R HTGEKP ++
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46
Score = 47.6 bits (114), Expect = 1e-07
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHM-LVHTGDRPHECS 148
+G++ +C CG A + L RH HTG++P S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 44.1 bits (105), Expect = 1e-06
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIH-KMVHSGEKPIKCSA 454
TG ++C CGK FI S H + H+GEKP S+
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46
Score = 41.8 bits (99), Expect = 1e-05
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHI-QTHSDLRPFVC 509
TG+KPY+C CGK + + L H H+ +P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQN-TSLIRHWRYYHTGEKPSGP 44
Score = 40.2 bits (95), Expect = 4e-05
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQ-LVHSGERNVKC 119
+ G K Y+C CGK FI +TS H H+GE+
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 37.9 bits (89), Expect = 2e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHL-NIHNGTKKYQC 91
+G P+ C C K+F Q L++H H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 37.9 bits (89), Expect = 3e-04
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVH 168
TG +P+EC CGK F + + H + H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 34.5 bits (80), Expect = 0.005
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHL-NIHNGTKKYQ 564
+G P+ C C K+F Q L++H H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG 43
Score = 33.3 bits (77), Expect = 0.012
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHL-PIHTG 332
G P+ C C K+F Q L +H HTG
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG 38
Score = 26.0 bits (58), Expect = 4.7
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHV-GMHNGINPFTCS 311
+ + + +P+ C CG+ + +L+ H H G P S
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 26.0 bits (58), Expect = 4.7
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHV-GMHNGINPFTCS 397
+ + + +P+ C CG+ + +L+ H H G P S
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 59.0 bits (142), Expect = 1e-11
Identities = 12/56 (21%), Positives = 23/56 (41%)
Query: 421 RFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEK 476
++ C+ CG R H H+ +P C+ C + + +L +H + K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 51.3 bits (122), Expect = 8e-09
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 88 KYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDR 143
KY C CG + K H H+ R C C + TK +L +HM +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 49.7 bits (118), Expect = 2e-08
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 451 KCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHS 502
C CG+ S LK+H R HT +PY CT C + L H+++ +
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTK-GNLTKHMKSKA 53
Score = 49.3 bits (117), Expect = 3e-08
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 118 KCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVHG 169
C+ CG+ S L +H+ HT RP+ C+ C F K N H K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 47.8 bits (113), Expect = 1e-07
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 33 FVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKK 88
++CE CG K L H+ H+ + P+ C +CN SF K L KH+ +KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 47.8 bits (113), Expect = 1e-07
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 507 FVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKK 562
++CE CG K L H+ H+ + P+ C +CN SF K L KH+ +KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 47.4 bits (112), Expect = 1e-07
Identities = 12/55 (21%), Positives = 20/55 (36%)
Query: 394 FTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEK 448
+ C C + L+KH+ HT + C C F + + H + K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 46.2 bits (109), Expect = 3e-07
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 280 FVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
++CE CG K L H+ H + P+ C++CN SF K L KH+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 46.2 bits (109), Expect = 3e-07
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 366 FVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
++CE CG K L H+ H + P+ C++CN SF K L KH+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 45.5 bits (107), Expect = 6e-07
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 478 YQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
Y C CG R ++ S L HI+TH+D+RP+ C C +K K L H+ +
Sbjct: 2 YICEECGIRXKKP-SMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 44.7 bits (105), Expect = 1e-06
Identities = 11/55 (20%), Positives = 18/55 (32%)
Query: 61 FTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
+ C C + L KH+ H + Y C C F + H + +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 43.9 bits (103), Expect = 3e-06
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 57
+ C CG + + S L HI+TH+D+RP+ C C +K K L H+ +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 43.2 bits (101), Expect = 4e-06
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNG 304
+ C CG + + S L HI+TH+D+RP+ C C +K K L H+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 33.2 bits (75), Expect = 0.015
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 351 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNG 390
S L HI+TH+D+RP+ C C +K K L H+
Sbjct: 15 SMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 31.6 bits (71), Expect = 0.063
Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 308 FTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHS 361
+ C C + L+KH+ HT + N+ ++T L H+++ +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYC--NFSFKTKGNLTKHMKSKA 53
Score = 25.8 bits (56), Expect = 8.2
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 535 FTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+ C C + L KH+ H + Y
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYH 31
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 59.3 bits (144), Expect = 1e-11
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 440 HKMVHSGEKPIKCS--ACGLAVLSSSHLKRHFRVHTGEKPYQCT--TCGKRLRRTVSELN 495
++ S + CS CG SSHLK H R HTGEKP+ C+ C +R R+ EL+
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS-DELS 66
Query: 496 AHIQTH 501
H +TH
Sbjct: 67 RHRRTH 72
Score = 50.5 bits (121), Expect = 1e-08
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 102 TSYKFHQLVHSGERNVKCDI--CGLALTTKSHLNRHMLVHTGDRPHECSV--CGKRFAKK 157
+ Q+ S R+ C CG SHL H HTG++P CS C +RFA+
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 158 WNAQVHKKK 166
H++
Sbjct: 63 DELSRHRRT 71
Score = 44.7 bits (106), Expect = 2e-06
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 265 SELNAHIQTHSDLRPFVCEI--CGQGYKMKKALLVHVGMHNGINPFTCSF--CNKSFTQK 320
S + S +R +C CG+ Y L H H G PF+CS+ C + F +
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 321 VGLQKHLPIH 330
L +H H
Sbjct: 63 DELSRHRRTH 72
Score = 44.7 bits (106), Expect = 2e-06
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 351 SELNAHIQTHSDLRPFVCEI--CGQGYKMKKALLVHVGMHNGINPFTCSF--CNKSFTQK 406
S + S +R +C CG+ Y L H H G PF+CS+ C + F +
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 407 VGLQKHLPIH 416
L +H H
Sbjct: 63 DELSRHRRTH 72
Score = 44.7 bits (106), Expect = 2e-06
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 462 SSHLKRHFRVHTGEKPYQCT--TCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
SS + + + C+ CGK ++ S L AH +TH+ +PF C
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKS-SHLKAHTRTHTGEKPFSCS 51
Score = 44.3 bits (105), Expect = 3e-06
Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 10/72 (13%)
Query: 408 GLQKHLPIHTGSTRFQCDL--CGKRFI---HQKSFYIHKMVHSGEKPIKCS--ACGLAVL 460
G + C CGK + H K H H+GEKP CS C
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLK---AHTRTHTGEKPFSCSWKGCERRFA 60
Query: 461 SSSHLKRHFRVH 472
S L RH R H
Sbjct: 61 RSDELSRHRRTH 72
Score = 44.3 bits (105), Expect = 3e-06
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 18 SELNAHIQTHSDLRPFVCEI--CGQGYKMKKALLVHVGMHSGIHPFTCHF--CNKSFTQK 73
S + S +R +C CG+ Y L H H+G PF+C + C + F +
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 74 IGLVKHLNIH 83
L +H H
Sbjct: 63 DELSRHRRTH 72
Score = 44.3 bits (105), Expect = 3e-06
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 492 SELNAHIQTHSDLRPFVCEI--CGQGYKMKKALLVHVGMHSGIHPFTCHF--CNKSFTQK 547
S + S +R +C CG+ Y L H H+G PF+C + C + F +
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 548 IGLVKHLNIH 557
L +H H
Sbjct: 63 DELSRHRRTH 72
Score = 37.4 bits (87), Expect = 7e-04
Identities = 15/71 (21%), Positives = 21/71 (29%), Gaps = 4/71 (5%)
Query: 45 KKALLVHVGMHSGIHPFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQCHL--CGKGFIH 100
S I C C K++ + L H H G K + C C + F
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 101 HTSYKFHQLVH 111
H+ H
Sbjct: 62 SDELSRHRRTH 72
Score = 32.0 bits (73), Expect = 0.053
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 4 IHEC--PTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
H C P CGK + S L AH +TH+ +PF C
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCS 51
Score = 31.2 bits (71), Expect = 0.11
Identities = 10/48 (20%), Positives = 14/48 (29%), Gaps = 2/48 (4%)
Query: 519 KKALLVHVGMHSGIHPFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQ 564
S I C C K++ + L H H G K +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFS 49
Score = 31.2 bits (71), Expect = 0.12
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 292 KKALLVHVGMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRT 349
+ I CS C K++ + L+ H HTG F +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 350 VSELNAHIQTH 360
EL+ H +TH
Sbjct: 62 SDELSRHRRTH 72
Score = 30.8 bits (70), Expect = 0.14
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 129 KSHLNRHMLVHTGDRPHECSV--CGKRFAKKWNAQVHKKK 166
S + + + R H CS CGK + K + + H +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT 41
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 57.5 bits (140), Expect = 2e-11
Identities = 15/37 (40%), Positives = 16/37 (43%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
SGE P +CS CG A L H R H GE
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 44.8 bits (107), Expect = 8e-07
Identities = 12/40 (30%), Positives = 14/40 (35%)
Query: 108 QLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHEC 147
SGE +C CG A K L H H G+
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 42.5 bits (101), Expect = 6e-06
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 470 RVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GE PY+C+ CGK R +L +H +TH+
Sbjct: 3 SGSSGENPYECSECGKAFNRK-DQLISHQRTHAGESGPSS 41
Score = 41.0 bits (97), Expect = 2e-05
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG +P+ C C K+F +K L+ H H G
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 39.8 bits (94), Expect = 5e-05
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 81 NIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G Y+C CGK F HQ H+GE
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 39.8 bits (94), Expect = 5e-05
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 415 IHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKC 452
+G ++C CGK F + H+ H+GE
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 37.1 bits (87), Expect = 4e-04
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG +P+ C C K+F +K L+ H H G
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS 40
Score = 36.3 bits (85), Expect = 8e-04
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G NP+ CS C K+F +K L H H G +
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 35.6 bits (83), Expect = 0.002
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G NP+ CS C K+F +K L H H G
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAG 35
Score = 33.6 bits (78), Expect = 0.008
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 139 HTGDRPHECSVCGKRFAKKWNAQVH 163
+G+ P+ECS CGK F +K H
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISH 29
Score = 28.2 bits (64), Expect = 0.68
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 499 QTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
S P+ C CG+ + K L+ H H+G +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 27.9 bits (63), Expect = 0.91
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 272 QTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 310
S P+ C CG+ + K L+ H H G + +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 27.9 bits (63), Expect = 0.91
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 358 QTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 396
S P+ C CG+ + K L+ H H G + +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 26.3 bits (59), Expect = 2.8
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
+GE +EC CGK + +L +H +TH+
Sbjct: 6 SGENP-----YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 25.6 bits (57), Expect = 5.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+EC CGK + +L +H +TH+
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 57.5 bits (140), Expect = 3e-11
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
SGEKP +C+ CG A + S L H R H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 46.8 bits (112), Expect = 2e-07
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHEC 147
SGE+ +C+ CG A KS L H H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 44.8 bits (107), Expect = 8e-07
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
+GEKPY+C CGK S L H +TH+ +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWK-SLLIVHERTHAGVSGPSS 43
Score = 42.5 bits (101), Expect = 6e-06
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +G K Y+C+ CGK FI + H+ H+G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 42.1 bits (100), Expect = 7e-06
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKC 452
+G ++C+ CGK FI + +H+ H+G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P+EC+ CGK F K VH++
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER 33
Score = 37.5 bits (88), Expect = 3e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG P+ C+ C K+F K L+ H H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 36.4 bits (85), Expect = 8e-04
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G P+ C+ C K+F K L H H G +
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 36.0 bits (84), Expect = 0.001
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G P+ C+ C K+F K L H H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
SG P+ C+ C K+F K L+ H H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS 42
Score = 28.7 bits (65), Expect = 0.45
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 310
+ + S +P+ C CG+ + K L+VH H G++ +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 28.7 bits (65), Expect = 0.45
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 396
+ + S +P+ C CG+ + K L+VH H G++ +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 28.7 bits (65), Expect = 0.50
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + S +P+ C CG+ + K L+VH H+G+ +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 57.6 bits (140), Expect = 3e-11
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP +C CG+ S L +H R H P ++
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45
Score = 46.8 bits (112), Expect = 2e-07
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGEKP+QC CG + L H+++H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWS-CSLFKHLRSHERTDPSGP 43
Score = 46.0 bits (110), Expect = 3e-07
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ +C CG+ + L +H+ H P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 44.1 bits (105), Expect = 2e-06
Identities = 13/43 (30%), Positives = 15/43 (34%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG FQC CG F S + H H P S+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45
Score = 41.8 bits (99), Expect = 1e-05
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G PF C C +F+ L KHL H T
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 39.9 bits (94), Expect = 5e-05
Identities = 10/42 (23%), Positives = 12/42 (28%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCD 120
+ G K +QC CG F S H H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 39.5 bits (93), Expect = 7e-05
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
+G PF C C +F+ L KHL H T
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPS 41
Score = 38.7 bits (91), Expect = 1e-04
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G PF C C +F+ L KHL H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 38.7 bits (91), Expect = 1e-04
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
G PF C C +F+ L KHL H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 33.7 bits (78), Expect = 0.007
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG++P +C CG F+ + H +
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR 33
Score = 31.4 bits (72), Expect = 0.045
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +PF C+ CG + +L H+ H +P S
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 31.4 bits (72), Expect = 0.045
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ + + +PF C+ CG + +L H+ H +P S
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 31.4 bits (72), Expect = 0.052
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ + + +PF C+ CG + +L H+ H P
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 31.4 bits (72), Expect = 0.052
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 496 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
+ + + +PF C+ CG + +L H+ H P
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 28.3 bits (64), Expect = 0.56
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGE+ +C CG + L H+++H P
Sbjct: 8 TGEKP-----FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 27.5 bits (62), Expect = 1.4
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVC 35
+C CG + L H+++H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 56.8 bits (138), Expect = 4e-11
Identities = 16/39 (41%), Positives = 17/39 (43%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPY 478
GEKP +C CG A L H RVHTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 44.5 bits (106), Expect = 1e-06
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPH 145
GE+ +CD CG A + K L H+ VHTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 44.1 bits (105), Expect = 2e-06
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPF 507
GEKPY+C CGK + L HI+ H+ P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQK-GSLIVHIRVHTGSGPS 40
Score = 42.2 bits (100), Expect = 7e-06
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKP 449
G ++CD CGK F + S +H VH+G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39
Score = 41.4 bits (98), Expect = 1e-05
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
G K Y+C CGK F S H VH+G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 39.9 bits (94), Expect = 5e-05
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 89
G G P+ C C K+F+QK L+ H+ +H G+
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 39.9 bits (94), Expect = 5e-05
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
G G P+ C C K+F+QK L+ H+ +H G+
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 39.1 bits (92), Expect = 8e-05
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G G P+ C C K+F+QK L H+ +HTG
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 39.1 bits (92), Expect = 8e-05
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
G G P+ C C K+F+QK L H+ +HTG
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.4 bits (85), Expect = 7e-04
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
G++P+ C CGK F++K + VH +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32
Score = 29.5 bits (67), Expect = 0.24
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFT 62
+ +P+ C+ CG+ + K +L+VH+ +H+G P +
Sbjct: 1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 28.7 bits (65), Expect = 0.38
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFT 309
+ +P+ C+ CG+ + K +L+VH+ +H G P +
Sbjct: 1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 28.7 bits (65), Expect = 0.38
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFT 395
+ +P+ C+ CG+ + K +L+VH+ +H G P +
Sbjct: 1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 56.7 bits (138), Expect = 5e-11
Identities = 15/39 (38%), Positives = 16/39 (41%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPY 478
GEKP C CG LK H R+HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 47.1 bits (113), Expect = 1e-07
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPF 507
GEKPY C CG R R L +H++ H+ P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHL-QTLKSHLRIHTGSGPS 40
Score = 44.8 bits (107), Expect = 7e-07
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPH 145
GE+ C+ICG L H+ +HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 42.5 bits (101), Expect = 6e-06
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G G P+ C C F L+ HL IHTG
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 42.5 bits (101), Expect = 6e-06
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
G G P+ C C F L+ HL IHTG
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 40.9 bits (97), Expect = 2e-05
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
G K Y C +CG F H + K H +H+G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 39.8 bits (94), Expect = 4e-05
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 89
G G P+ C C F L HL IH G+
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 39.8 bits (94), Expect = 4e-05
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
G G P+ C C F L HL IH G+
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 37.5 bits (88), Expect = 4e-04
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVH 163
G++P+ C +CG RF + H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30
Score = 30.5 bits (70), Expect = 0.098
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFT 62
+ +P+ CEICG ++ + L H+ +H+G P +
Sbjct: 1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 30.5 bits (70), Expect = 0.098
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 496 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFT 536
+ +P+ CEICG ++ + L H+ +H+G P +
Sbjct: 1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 27.5 bits (62), Expect = 1.3
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPF 280
GE+ P + C CG ++R + L +H++ H+ P
Sbjct: 7 GGEK---P--YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 27.1 bits (61), Expect = 1.9
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPF 33
+ C CG ++R + L +H++ H+ P
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 57.7 bits (139), Expect = 9e-11
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 21/96 (21%)
Query: 54 MHSGIHPFTCHFCNKSFTQKIGLVKHLN-IHNGTKKYQCHLCGKGFIHHTSYKFHQLVHS 112
+ C+++F+ LV H+ H G + H+C
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC------------------ 60
Query: 113 GERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
+C G + K L H+ VHTG++ S
Sbjct: 61 --YWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94
Score = 57.7 bits (139), Expect = 1e-10
Identities = 18/76 (23%), Positives = 22/76 (28%), Gaps = 9/76 (11%)
Query: 415 IHTGSTRFQCDLCGKRFIHQKSFYIH-KMVHSGEKPIK--------CSACGLAVLSSSHL 465
I C + F H M H G C G + + L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 466 KRHFRVHTGEKPYQCT 481
H RVHTGEK +
Sbjct: 79 VNHIRVHTGEKSGPSS 94
Score = 40.3 bits (94), Expect = 1e-04
Identities = 14/96 (14%), Positives = 24/96 (25%), Gaps = 22/96 (22%)
Query: 443 VHSGEKPIKCSACGLAVLSSSHLKRHF-RVHTGEKPYQCTTCGKRLRRTVSELNAHIQTH 501
+ + +C + L H H G C
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE-------------- 64
Query: 502 SDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
C G+ +K K L+ H+ +H+G
Sbjct: 65 -------CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 38.0 bits (88), Expect = 9e-04
Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 9/74 (12%)
Query: 500 THSDLRPFVCEICGQGYKMKKALLVHV-GMHSGIHPFTCHFC--------NKSFTQKIGL 550
+ C + + L+ HV H G H C KSF K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 551 VKHLNIHNGTKKYQ 564
V H+ +H G K
Sbjct: 79 VNHIRVHTGEKSGP 92
Score = 37.6 bits (87), Expect = 0.001
Identities = 16/74 (21%), Positives = 22/74 (29%), Gaps = 9/74 (12%)
Query: 273 THSDLRPFVCEICGQGYKMKKALLVHV-GMHNGINPFT--------CSFCNKSFTQKVGL 323
+ C + + L+ HV H G C KSF K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 324 QKHLPIHTGSTRFQ 337
H+ +HTG
Sbjct: 79 VNHIRVHTGEKSGP 92
Score = 36.1 bits (83), Expect = 0.004
Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 9/63 (14%)
Query: 110 VHSGERNVKCDICGLALTTKSHLNRHML-VHTGDRPH--------ECSVCGKRFAKKWNA 160
+ + + C +T L H+ H G EC GK F K+
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 161 QVH 163
H
Sbjct: 79 VNH 81
Score = 35.7 bits (82), Expect = 0.004
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 9/69 (13%)
Query: 252 HECPTCGKKWRTVSELNAHIQ-THSDLRPFV--------CEICGQGYKMKKALLVHVGMH 302
+C + + T+ EL H+ H C G+ +K K L+ H+ +H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 303 NGINPFTCS 311
G S
Sbjct: 86 TGEKSGPSS 94
Score = 35.7 bits (82), Expect = 0.006
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 9/68 (13%)
Query: 5 HECPTCGKKWRTVSELNAHIQ-THSDLRPFV--------CEICGQGYKMKKALLVHVGMH 55
+C + + T+ EL H+ H C G+ +K K L+ H+ +H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 56 SGIHPFTC 63
+G
Sbjct: 86 TGEKSGPS 93
Score = 34.6 bits (79), Expect = 0.012
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 23/98 (23%)
Query: 301 MHNGINPFTCSFCNKSFTQKVGLQKHLP-IHTGSTRFQWEQSHLNYVWRTVSELNAHIQT 359
+ C+++F+ L H+ H G Q++ W
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE----QNNHVCYWEE---------- 64
Query: 360 HSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
C G+ +K K L+ H+ +H G S
Sbjct: 65 --------CPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 56.0 bits (136), Expect = 9e-11
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
+GE P +C CG L H + H+G+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 46.0 bits (110), Expect = 4e-07
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHEC 147
+GE +C CG + K L H H+G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 42.9 bits (102), Expect = 4e-06
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVC 509
TGE PY+C CGK R +L +H +THS
Sbjct: 3 SGSSGTGENPYECCECGKVFSRK-DQLVSHQKTHSGQSGPSS 43
Score = 39.8 bits (94), Expect = 4e-05
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKC 452
TG ++C CGK F + H+ HSG+
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 39.8 bits (94), Expect = 5e-05
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ G Y+C CGK F HQ HSG+
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 37.9 bits (89), Expect = 3e-04
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G +P+ C C K F++K LV H H+G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G NP+ C C K F++K L H H+G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
G NP+ C C K F++K L H H+G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG+ P+EC CGK F++K H+K
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQK 33
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G +P+ C C K F++K LV H H+G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS 42
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 310
+ + + P+ C CG+ + K L+ H H+G + +
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 396
+ + + P+ C CG+ + K L+ H H+G + +
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 25.5 bits (57), Expect = 6.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVC 282
TGE P +EC CGK + +L +H +THS
Sbjct: 8 TGEN---P--YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 55.4 bits (134), Expect = 2e-10
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 440 HKMVHSGEKPIKCS--ACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
+GEKP C+ CG S L RH R H+G KP ++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47
Score = 51.9 bits (125), Expect = 3e-09
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 468 HFRVHTGEKPYQCT--TCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
TGEKP+ CT CG R R+ EL+ H ++HS ++P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRS-DELSRHRRSHSGVKPSGPS 46
Score = 41.1 bits (97), Expect = 2e-05
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 107 HQLVHSGERNVKCD--ICGLALTTKSHLNRHMLVHTGDRPHECS 148
+GE+ C CG + L+RH H+G +P S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 41.1 bits (97), Expect = 2e-05
Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 384 HVGMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQCD 425
G PF C++ C F++ L +H H+G
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.0 bits (94), Expect = 5e-05
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 51 HVGMHSGIHPFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQC 91
+G PF C + C F++ L +H H+G K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 39.6 bits (93), Expect = 7e-05
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 412 HLPIHTGSTRFQCD--LCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
TG F C CG RF H+ HSG KP S+
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47
Score = 36.9 bits (86), Expect = 5e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 298 HVGMHNGINPFTCSF--CNKSFTQKVGLQKHLPIHTGSTRFQ 337
G PF C++ C F++ L +H H+G
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG 44
Score = 36.5 bits (85), Expect = 9e-04
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 525 HVGMHSGIHPFTCHF--CNKSFTQKIGLVKHLNIHNGTKKYQ 564
+G PF C + C F++ L +H H+G K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG 44
Score = 34.6 bits (80), Expect = 0.004
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 135 HMLVHTGDRPHECSV--CGKRFAKKWNAQVHKKK 166
TG++P C+ CG RF++ H++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS 36
Score = 32.7 bits (75), Expect = 0.017
Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 2/44 (4%)
Query: 79 HLNIHNGTKKYQCH--LCGKGFIHHTSYKFHQLVHSGERNVKCD 120
+ G K + C CG F H+ HSG +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 32.3 bits (74), Expect = 0.025
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 496 AHIQTHSDLRPFVC--EICGQGYKMKKALLVHVGMHSGIHPFTC 537
+ + + +PF C CG + L H HSG+ P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 32.3 bits (74), Expect = 0.027
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 269 AHIQTHSDLRPFVC--EICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ + + +PF C CG + L H H+G+ P S
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 30.3 bits (69), Expect = 0.11
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 242 TGERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCE 283
TGE+ P P CG ++ EL+ H ++HS ++P
Sbjct: 8 TGEK---PFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 29.2 bits (66), Expect = 0.37
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 5 HEC--PTCGKKWRTVSELNAHIQTHSDLRPFVCE 36
C P CG ++ EL+ H ++HS ++P
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 55.3 bits (134), Expect = 2e-10
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTT 482
SGEK C CG S L+ H RVH GEK ++
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45
Score = 46.0 bits (110), Expect = 3e-07
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
+G CD CGK F + + IH+ VH GEK S+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45
Score = 44.1 bits (105), Expect = 1e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECS 148
SGE++ CD CG S L H VH G++ S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 43.3 bits (103), Expect = 3e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCD 120
+ +G K + C CGK F + ++ + HQ VH GE+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 39.5 bits (93), Expect = 7e-05
Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCE 510
+GEK + C CGK S L H + H +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYI-SALRIHQRVHMGEKCSGPS 44
Score = 36.4 bits (85), Expect = 9e-04
Identities = 12/41 (29%), Positives = 14/41 (34%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG TC C K+F L H +H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 35.6 bits (83), Expect = 0.001
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHK 164
+G++ H C CGK F ++H+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQ 32
Score = 35.6 bits (83), Expect = 0.002
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
SG TC C K+F L H +H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCS 41
Score = 35.3 bits (82), Expect = 0.002
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G TC C K+F L+ H +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 35.3 bits (82), Expect = 0.002
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
+G TC C K+F L+ H +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 29.1 bits (66), Expect = 0.33
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 311
+ S + C+ CG+ + AL +H +H G S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 29.1 bits (66), Expect = 0.33
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCS 397
+ S + C+ CG+ + AL +H +H G S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 27.9 bits (63), Expect = 0.85
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 23 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 57
+ S + C+ CG+ + AL +H +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 27.9 bits (63), Expect = 0.85
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 497 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
+ S + C+ CG+ + AL +H +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 54.7 bits (131), Expect = 5e-10
Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 7/71 (9%)
Query: 408 GLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKR 467
K IH G +C CG FI + + S K C C + L +
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57
Query: 468 HFRVHTGEKPY 478
+G+K
Sbjct: 58 DEGNESGKKTS 68
Score = 53.9 bits (129), Expect = 1e-09
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 7/71 (9%)
Query: 75 GLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNR 134
K IH G + +C CG FI ++ S + C+ C ++ LN+
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57
Query: 135 HMLVHTGDRPH 145
+G +
Sbjct: 58 DEGNESGKKTS 68
Score = 53.9 bits (129), Expect = 1e-09
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 461 SSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKK 520
SS + ++H G++ +C+ CG T S + +CE C + +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIF--------IRRSTLSRRKTPMCEKCRKDSCQEA 53
Query: 521 ALLVHVGMHSG 531
AL G SG
Sbjct: 54 ALNKDEGNESG 64
Score = 42.3 bits (99), Expect = 1e-05
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
Query: 102 TSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQ 161
S Q +H G+R+ KC CG+ +S L+R + C C K ++
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56
Query: 162 VHKK 165
+
Sbjct: 57 KDEG 60
Score = 42.0 bits (98), Expect = 2e-05
Identities = 14/72 (19%), Positives = 19/72 (26%), Gaps = 7/72 (9%)
Query: 18 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLV 77
+ H R C CG + + S C C K Q+ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALN 56
Query: 78 KHLNIHNGTKKY 89
K +G K
Sbjct: 57 KDEGNESGKKTS 68
Score = 41.2 bits (96), Expect = 3e-05
Identities = 12/68 (17%), Positives = 18/68 (26%), Gaps = 7/68 (10%)
Query: 265 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 324
+ H R C CG + + + C C K Q+ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALN 56
Query: 325 KHLPIHTG 332
K +G
Sbjct: 57 KDEGNESG 64
Score = 41.2 bits (96), Expect = 3e-05
Identities = 12/68 (17%), Positives = 18/68 (26%), Gaps = 7/68 (10%)
Query: 351 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQ 410
+ H R C CG + + + C C K Q+ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALN 56
Query: 411 KHLPIHTG 418
K +G
Sbjct: 57 KDEGNESG 64
Score = 34.6 bits (79), Expect = 0.007
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 128 TKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
+ + +H GDR +CS CG F ++ K
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT 39
Score = 29.6 bits (66), Expect = 0.47
Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 7/53 (13%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 57
+C CG + T S + +CE C + + AL G SG
Sbjct: 19 QKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESG 64
Score = 28.5 bits (63), Expect = 1.1
Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 7/57 (12%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPF 308
+C CG + T S + +CE C + + AL G +G
Sbjct: 19 QKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68
Score = 26.9 bits (59), Expect = 4.4
Identities = 13/73 (17%), Positives = 22/73 (30%), Gaps = 9/73 (12%)
Query: 322 GLQKHLPIHTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKAL 381
K IH G + + + + T S + +CE C + + AL
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIF---------IRRSTLSRRKTPMCEKCRKDSCQEAAL 55
Query: 382 LVHVGMHNGINPF 394
G +G
Sbjct: 56 NKDEGNESGKKTS 68
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 53.7 bits (130), Expect = 6e-10
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPY 478
SG++ +C CG + L H R+HTG P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 37.9 bits (89), Expect = 2e-04
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 83 HNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
+G + Y+C CGK F S H+ +H+G
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 37.9 bits (89), Expect = 2e-04
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 111 HSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPH 145
SG+R +C CG + K L H +HTG P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 37.6 bits (88), Expect = 3e-04
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 470 RVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPF 507
+G++ Y+C CGK R+ L H + H+ P
Sbjct: 3 SGSSGQRVYECQECGKSFRQK-GSLTLHERIHTGSGPS 39
Score = 36.4 bits (85), Expect = 7e-04
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 89
SG + C C KSF QK L H IH G+
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 36.4 bits (85), Expect = 7e-04
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
SG + C C KSF QK L H IH G+
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 36.4 bits (85), Expect = 7e-04
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 416 HTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKP 449
+G ++C CGK F + S +H+ +H+G P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP 38
Score = 36.0 bits (84), Expect = 0.001
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+G + C C KSF QK L H IHTG
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTG 35
Score = 36.0 bits (84), Expect = 0.001
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
+G + C C KSF QK L H IHTG
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTG 35
Score = 32.9 bits (76), Expect = 0.013
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 139 HTGDRPHECSVCGKRFAKKWNAQVH 163
+G R +EC CGK F +K + +H
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLH 29
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 51.8 bits (125), Expect = 3e-09
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
+ K C+ CG A HL RH ++HT +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 41.0 bits (97), Expect = 2e-05
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHEC 147
+ ++ C+ CG A T HL RH +HT
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 41.0 bits (97), Expect = 2e-05
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHS 502
T K Y C CGK R L H + H+
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRI-FHLTRHQKIHT 36
Score = 38.3 bits (90), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+ +K Y C+ CGK F HQ +H+ +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 34.5 bits (80), Expect = 0.004
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+ C+ C K+FT+ L +H IHT +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 33.7 bits (78), Expect = 0.007
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
+ + C+ C K+FT+ L +H IH
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 33.7 bits (78), Expect = 0.008
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+ C+ C K+FT+ L +H IHT
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 32.9 bits (76), Expect = 0.014
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
T + + C+ CGK F + ++ H+K
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQK 33
Score = 32.2 bits (74), Expect = 0.023
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 563
+ + C+ C K+FT+ L +H IH
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGP 41
Score = 25.6 bits (57), Expect = 5.2
Identities = 7/41 (17%), Positives = 16/41 (39%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 310
+ +D + + C CG+ + L H +H + +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 25.6 bits (57), Expect = 5.2
Identities = 7/41 (17%), Positives = 16/41 (39%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 396
+ +D + + C CG+ + L H +H + +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 25.2 bits (56), Expect = 8.1
Identities = 7/41 (17%), Positives = 16/41 (39%)
Query: 23 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+ +D + + C CG+ + L H +H+ +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 25.2 bits (56), Expect = 8.1
Identities = 7/41 (17%), Positives = 16/41 (39%)
Query: 497 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 537
+ +D + + C CG+ + L H +H+ +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 49.9 bits (119), Expect = 2e-08
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTC 483
K + C CG HL RH H+GEKPY
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 48.4 bits (115), Expect = 5e-08
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 111 HSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVC 150
+ V C+ICG HLNRH L H+G++P+
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 39.2 bits (91), Expect = 9e-05
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 416 HTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSAC 455
+ C++CGK F HK+ HSGEKP
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 37.2 bits (86), Expect = 5e-04
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 470 RVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEIC 512
K C CGK R V LN H +HS +P+
Sbjct: 5 SSGRTRKQVACEICGKIFRD-VYHLNRHKLSHSGEKPYSSGPS 46
Score = 35.7 bits (82), Expect = 0.002
Identities = 10/35 (28%), Positives = 12/35 (34%)
Query: 60 PFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLC 94
C C K F L +H H+G K Y
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 35.7 bits (82), Expect = 0.002
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEIC 38
C CGK +R V LN H +HS +P+
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 35.7 bits (82), Expect = 0.002
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSDLRPFVCEIC 285
C CGK +R V LN H +HS +P+
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 34.9 bits (80), Expect = 0.003
Identities = 8/35 (22%), Positives = 11/35 (31%)
Query: 393 PFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLC 427
C C K F L +H H+G +
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 32.6 bits (74), Expect = 0.023
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 273 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCN 314
+ + CEICG+ ++ L H H+G P++ +
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 32.6 bits (74), Expect = 0.023
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 359 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCN 400
+ + CEICG+ ++ L H H+G P++ +
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 32.2 bits (73), Expect = 0.026
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 26 THSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCN 67
+ + CEICG+ ++ L H HSG P++ +
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 32.2 bits (73), Expect = 0.026
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 500 THSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCN 541
+ + CEICG+ ++ L H HSG P++ +
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 31.4 bits (71), Expect = 0.056
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 534 PFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 564
C C K F L +H H+G K Y
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS 42
Score = 30.3 bits (68), Expect = 0.15
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 307 PFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQ 337
C C K F L +H H+G +
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS 42
Score = 28.4 bits (63), Expect = 0.59
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 139 HTGDRPHECSVCGKRFAKKWNAQVHK 164
+ C +CGK F ++ HK
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHK 32
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 49.6 bits (119), Expect = 2e-08
Identities = 10/39 (25%), Positives = 12/39 (30%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPY 478
GE P C CG + L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 41.9 bits (99), Expect = 1e-05
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 416 HTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKP 449
G T + C CGK F + S +H+ S P
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39
Score = 40.3 bits (95), Expect = 3e-05
Identities = 11/37 (29%), Positives = 11/37 (29%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
G Y C CGK F S HQ S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 40.0 bits (94), Expect = 4e-05
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G G P+ C C KSFTQ+ L H +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 40.0 bits (94), Expect = 4e-05
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
G G P+ C C KSFTQ+ L H +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 40.0 bits (94), Expect = 4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQA 565
G G P+ C C KSFTQ+ L H + +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG 42
Score = 40.0 bits (94), Expect = 4e-05
Identities = 9/39 (23%), Positives = 12/39 (30%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPH 145
GE C CG + T + L H + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 40.0 bits (94), Expect = 5e-05
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKY 89
G G P+ C C KSFTQ+ L H + +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 38.4 bits (90), Expect = 1e-04
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPF 507
GE PY C CGK + L H ++ S P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQR-GSLAVHQRSCSQSGPS 40
Score = 34.2 bits (79), Expect = 0.005
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 139 HTGDRPHECSVCGKRFAKKWNAQVHKK 165
G+ P+ C CGK F ++ + VH++
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQR 32
Score = 28.4 bits (64), Expect = 0.51
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFT 62
+ P++C CG+ + + +L VH S P +
Sbjct: 1 GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 28.4 bits (64), Expect = 0.51
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 496 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFT 536
+ P++C CG+ + + +L VH S P +
Sbjct: 1 GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 28.0 bits (63), Expect = 0.84
Identities = 8/41 (19%), Positives = 17/41 (41%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFT 309
+ P++C CG+ + + +L VH + P +
Sbjct: 1 GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 28.0 bits (63), Expect = 0.84
Identities = 8/41 (19%), Positives = 17/41 (41%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFT 395
+ P++C CG+ + + +L VH + P +
Sbjct: 1 GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 50.3 bits (119), Expect = 5e-08
Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Query: 84 NGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDR 143
+ YQC LC H+ + C C L + H +
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE-SKCEYK 68
Query: 144 PHECSVCGKRFAKKWNAQVHKKKVHGLD 171
C C + F ++ H+ +VH +
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 46.0 bits (108), Expect = 2e-06
Identities = 17/82 (20%), Positives = 23/82 (28%), Gaps = 4/82 (4%)
Query: 393 PFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKC 452
+ C CN + + H + C C RF K + C
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRF-FSPELKQEHESKCEYKKLTC 72
Query: 453 SACGLAVLSSSHLKRH-FRVHT 473
C SS + RH VH
Sbjct: 73 LECMRTFKSSFSIWRHQVEVHN 94
Score = 40.3 bits (93), Expect = 2e-04
Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 251 IHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 310
+++C C K ++ E +H + + VC C + + H TC
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESKCEY-KKLTC 72
Query: 311 SFCNKSFTQKVGLQKH 326
C ++F + +H
Sbjct: 73 LECMRTFKSSFSIWRH 88
Score = 39.5 bits (91), Expect = 4e-04
Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 474 GEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIH 533
++ YQC C +L ++ E +H + + VC C + + H
Sbjct: 13 NKEVYQCRLCNAKLS-SLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHES-KCEYK 68
Query: 534 PFTCHFCNKSFTQKIGLVKH-LNIHN 558
TC C ++F + +H + +HN
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 38.7 bits (89), Expect = 6e-04
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 4 IHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTC 63
+++C C K ++ E +H + + VC C + + H TC
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHES-KCEYKKLTC 72
Query: 64 HFCNKSFTQKIGLVKH-LNIHN 84
C ++F + +H + +HN
Sbjct: 73 LECMRTFKSSFSIWRHQVEVHN 94
Score = 38.0 bits (87), Expect = 0.001
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Query: 418 GSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKP 477
+QC LC + H+ + C C L S + H K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 478 YQCTTCGKRLRRTVSELNAHIQT 500
C C + ++ + H
Sbjct: 70 LTCLECMRTF-KSSFSIWRHQVE 91
Score = 35.6 bits (81), Expect = 0.007
Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 3/78 (3%)
Query: 31 RPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQ 90
+ C +C H + + C +C+ F +H + KK
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEY-KKLT 71
Query: 91 CHLCGKGFIHHTSYKFHQ 108
C C + F S HQ
Sbjct: 72 CLECMRTFKSSFSIWRHQ 89
Score = 34.1 bits (77), Expect = 0.021
Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Query: 341 SHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCN 400
N ++ E +H + + VC C + + H TC C
Sbjct: 20 RLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESKCEY-KKLTCLECM 76
Query: 401 KSFTQKVGLQKH 412
++F + +H
Sbjct: 77 RTFKSSFSIWRH 88
Score = 31.4 bits (70), Expect = 0.20
Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 253 ECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHV 299
CP C ++ + H ++ + + C C + +K ++ H
Sbjct: 44 VCPYCSLRFFSPELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQ 89
Score = 30.6 bits (68), Expect = 0.37
Identities = 13/108 (12%), Positives = 27/108 (25%), Gaps = 33/108 (30%)
Query: 278 RPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQ 337
+ C +C H + N C +C+ F Q+H
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEH----------- 61
Query: 338 WEQSHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHV 385
++ + + C C + +K ++ H
Sbjct: 62 --------------------ESKCEYKKLTCLECMRTFKSSFSIWRHQ 89
Score = 26.8 bits (58), Expect = 9.5
Identities = 8/57 (14%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Query: 505 RPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTK 561
+ C +C H + + C +C+ F +H + K
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEYKK 69
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 48.1 bits (115), Expect = 5e-08
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQC 480
SGEKP C+ C ++ L +H ++HT +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 37.3 bits (87), Expect = 4e-04
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 111 HSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHEC 147
SGE+ C C + + L +H +HT
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 36.9 bits (86), Expect = 5e-04
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 83 HNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKC 119
+G K Y C C + F + HQ +H+ +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 36.9 bits (86), Expect = 6e-04
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 470 RVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHS 502
+GEKPY C C + + L H + H+
Sbjct: 3 SGSSGEKPYSCAECKETFSDN-NRLVQHQKMHT 34
Score = 35.0 bits (81), Expect = 0.002
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQC 91
SG P++C C ++F+ LV+H +H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 34.2 bits (79), Expect = 0.005
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQC 424
+G P++C+ C ++F+ L +H +HT +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 33.8 bits (78), Expect = 0.006
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGST 334
+G P++C+ C ++F+ L +H +HT +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKS 37
Score = 33.8 bits (78), Expect = 0.007
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNG 559
SG P++C C ++F+ LV+H +H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 33.8 bits (78), Expect = 0.007
Identities = 6/37 (16%), Positives = 13/37 (35%)
Query: 416 HTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKC 452
+G + C C + F H+ +H+ +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 31.5 bits (72), Expect = 0.041
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 139 HTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G++P+ C+ C + F+ H+K
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQK 31
Score = 26.1 bits (58), Expect = 3.2
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 26 THSDLRPFVCEICGQGYKMKKALLVHVGMHSG 57
S +P+ C C + + L+ H MH+
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 26.1 bits (58), Expect = 3.2
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 500 THSDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
S +P+ C C + + L+ H MH+
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 26.1 bits (58), Expect = 3.4
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 273 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 310
S +P+ C C + + L+ H MH + +
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 26.1 bits (58), Expect = 3.4
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 359 THSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTC 396
S +P+ C C + + L+ H MH + +
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 45.6 bits (108), Expect = 5e-07
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKP 477
+GE P KCS C ++L +H R H +
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 39.1 bits (91), Expect = 1e-04
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHE 146
+GE KC C T +++L +H H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS 42
Score = 38.7 bits (90), Expect = 1e-04
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 298 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 332
G NPF CS C++ FTQ+ L +H H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 38.7 bits (90), Expect = 1e-04
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 384 HVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTG 418
G NPF CS C++ FTQ+ L +H H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 38.3 bits (89), Expect = 2e-04
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 51 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTK 87
+G +PF C C++ FTQ+ LV+H H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 38.3 bits (89), Expect = 2e-04
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 525 HVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTK 561
+G +PF C C++ FTQ+ LV+H H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 34.8 bits (80), Expect = 0.003
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 467 RHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSD 503
GE P++C+ C + + + L H +TH+
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQR-NYLVQHERTHAR 37
Score = 33.3 bits (76), Expect = 0.010
Identities = 6/38 (15%), Positives = 13/38 (34%)
Query: 78 KHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
+ G ++C C + F H+ H+ +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 32.5 bits (74), Expect = 0.024
Identities = 7/39 (17%), Positives = 13/39 (33%)
Query: 411 KHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKP 449
G F+C C + F + H+ H+ +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 31.8 bits (72), Expect = 0.040
Identities = 8/42 (19%), Positives = 16/42 (38%)
Query: 134 RHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVHGLDVPGT 175
G+ P +CS C + F ++ H++ P +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS 43
Score = 27.5 bits (61), Expect = 1.1
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 22 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 57
+ + + PF C C + + + L+ H H+
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 27.5 bits (61), Expect = 1.1
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 496 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
+ + + PF C C + + + L+ H H+
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 26.7 bits (59), Expect = 2.5
Identities = 7/36 (19%), Positives = 14/36 (38%)
Query: 269 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNG 304
+ + + PF C C + + + L+ H H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 26.7 bits (59), Expect = 2.5
Identities = 7/36 (19%), Positives = 14/36 (38%)
Query: 355 AHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNG 390
+ + + PF C C + + + L+ H H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 47.6 bits (112), Expect = 8e-07
Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 6/111 (5%)
Query: 454 ACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLR---PFVCE 510
+ V + H ++ + + + ++++ + FVC
Sbjct: 19 GIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCP 78
Query: 511 ICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHL-NIHNGT 560
+C + +L H + H C C K FT + H+ HN
Sbjct: 79 LCLMPFSSSVSLKQH--IRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNIC 127
Score = 45.3 bits (106), Expect = 4e-06
Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Query: 426 LCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGK 485
+ + + + S+ + C C + SS LK+H R E C C K
Sbjct: 51 IHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKK 108
Query: 486 RLRRTVSELNAHIQTH 501
T H+
Sbjct: 109 EFTST-DSALDHVCKK 123
Score = 43.8 bits (102), Expect = 2e-05
Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 98 FIHHTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKK 157
+ +SY + L C +C + ++ L +H+ C VC K F
Sbjct: 56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTST 113
Query: 158 WNAQVHKKKVHGL 170
+A H K H +
Sbjct: 114 DSALDHVCKKHNI 126
Score = 40.3 bits (93), Expect = 3e-04
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 17 VSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGL 76
S + + FVC +C + +L H + H C C K FT
Sbjct: 59 ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQH--IRYTEHTKVCPVCKKEFTSTDSA 116
Query: 77 VKHL-NIHNGT 86
+ H+ HN
Sbjct: 117 LDHVCKKHNIC 127
Score = 38.4 bits (88), Expect = 0.001
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Query: 264 VSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGL 323
S + + FVC +C + +L H+ + C C K FT
Sbjct: 59 ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSA 116
Query: 324 QKHL 327
H+
Sbjct: 117 LDHV 120
Score = 38.4 bits (88), Expect = 0.001
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Query: 350 VSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGL 409
S + + FVC +C + +L H+ + C C K FT
Sbjct: 59 ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSA 116
Query: 410 QKHL 413
H+
Sbjct: 117 LDHV 120
Score = 38.0 bits (87), Expect = 0.002
Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Query: 66 CNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLA 125
N + + L ++ C LC F S K H E C +C
Sbjct: 52 HNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKE 109
Query: 126 LTTKSHLNRHM 136
T+ H+
Sbjct: 110 FTSTDSALDHV 120
Score = 37.2 bits (85), Expect = 0.003
Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 45 KKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSY 104
+ + L + I F C C F+ + L +H+ C +C K F S
Sbjct: 59 ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA 116
Query: 105 KFH 107
H
Sbjct: 117 LDH 119
Score = 35.3 bits (80), Expect = 0.015
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 254 CPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVG-MHNG 304
CP C + + L HI+ VC +C + + + L HV HN
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 34.9 bits (79), Expect = 0.020
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 7 CPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHV 52
CP C + + L HI+ VC +C + + + L HV
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHV 120
Score = 31.4 bits (70), Expect = 0.30
Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 33/100 (33%)
Query: 292 KKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQWEQSHLNYVWRTVS 351
+ + L + I+ F C C F+ V L++H+
Sbjct: 59 ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE-------------------- 98
Query: 352 ELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVG-MHNG 390
VC +C + + + L HV HN
Sbjct: 99 ------------HTKVCPVCKKEFTSTDSALDHVCKKHNI 126
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 47.7 bits (113), Expect = 9e-06
Identities = 91/581 (15%), Positives = 155/581 (26%), Gaps = 208/581 (35%)
Query: 24 IQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFC----NKSFTQKIGLVKH 79
+ +S RP G ++ LLV P F + F +
Sbjct: 1 MDAYS-TRPLTLS---HG-SLEHVLLV---------PTASFFIASQLQEQFNK------- 39
Query: 80 LNIHNGTKKY--------QCHLCGKGFIHHTSYKFHQLVHSGERNVKCDICGLALT--TK 129
+ T+ + L GK F+ + S LV + + L LT
Sbjct: 40 -ILPEPTEGFAADDEPTTPAELVGK-FLGYVS----SLVEPSKVGQFDQVLNLCLTEFEN 93
Query: 130 SHLNR---HMLVHTGDRPHECSVCGKR------FAKKWNAQVHKKKVHG--L--DVPGTT 176
+L H L + ++ ++ + + A+ K L V
Sbjct: 94 CYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGN 153
Query: 177 HRVMPVPPIGG-GEKEE------DVATTDTEDDVPSIKIKFLSALIYFFVSWTFWPLVSQ 229
+++ + GG G ++ D+ T + LI F + T L+
Sbjct: 154 AQLVAI--FGGQGNTDDYFEELRDLYQTYHV---------LVGDLI-KFSAETLSELIRT 201
Query: 230 ----ECFLTIGFFF--FLTGERAC------------MPLI------HECPTCGKKWRTVS 265
E T G +L PLI H T T
Sbjct: 202 TLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPG 261
Query: 266 ELNAHIQTHSDLRPFVCEICGQG----------------YK-MKKAL--LVHVGMHNGIN 306
EL ++++ + QG + ++KA+ L +G+
Sbjct: 262 ELRSYLKGAT--------GHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVR---- 309
Query: 307 PFTCSFCNKSFTQKVGLQKHL------PIH----TGSTRFQWEQSHLNYVWRTVSELNAH 356
++ N S + L+ L P + T+ Q + V++ N+H
Sbjct: 310 -CYEAYPNTSLPPSI-LEDSLENNEGVPSPMLSISNLTQEQVQ--------DYVNKTNSH 359
Query: 357 IQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQK-VGLQKHL-P 414
+ V + + NG S Q GL L
Sbjct: 360 LPAGKQ--------------------VEISLVNGAKNLVVS----GPPQSLYGLNLTLRK 395
Query: 415 IHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLS---SSHLK----- 466
S Q ++ S K K S L V S S L
Sbjct: 396 AKAPSGLDQ----------------SRIPFSERKL-KFSNRFLPVASPFHSHLLVPASDL 438
Query: 467 -------RHFRVHTGE--KPYQCTTCGKRLRRTVSELNAHI 498
+ + + P T G LR ++ I
Sbjct: 439 INKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERI 479
Score = 29.6 bits (66), Expect = 3.1
Identities = 31/203 (15%), Positives = 51/203 (25%), Gaps = 79/203 (38%)
Query: 15 RTVSELNAHIQTHSDL--------RPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFC 66
V++ N+H+ + + V + G P + +
Sbjct: 351 DYVNKTNSHLPAGKQVEISLVNGAKNLV--VSG-------------------PPQSLY-- 387
Query: 67 NKSFTQKIGLVKHL-NIHNGTKKYQCHLCGKGFIHHTSYK-------------FH-QLVH 111
GL L + Q I + K FH L+
Sbjct: 388 --------GLNLTLRKAKAPSGLDQSR------IPFSERKLKFSNRFLPVASPFHSHLLV 433
Query: 112 SGERNVKCDICGLALTTKSHLNRHML---V-HTGD----RPHECSVCGK------RFAKK 157
+ D+ ++ N + V T D R S+ + R K
Sbjct: 434 PASDLINKDLVKNNVS----FNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVK 489
Query: 158 WNAQVHKKKVHGLDV-PGTTHRV 179
W K H LD PG +
Sbjct: 490 WETTTQFKATHILDFGPGGASGL 512
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 40.8 bits (96), Expect = 2e-05
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 468 HFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTH 501
R TG KP+QC C + R+ L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRS-DHLALHRKRH 34
Score = 35.8 bits (83), Expect = 0.001
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVH 472
+G KP +C C + S HL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.9 bits (73), Expect = 0.027
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 135 HMLVHTGDRPHECSVCGKRFAKKWNAQVHKK 165
TG +P +C C + F++ + +H+K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 30.8 bits (70), Expect = 0.075
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIH 83
+GI PF C C++SF++ L H H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.8 bits (70), Expect = 0.075
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIH 557
+GI PF C C++SF++ L H H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.8 bits (70), Expect = 0.077
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIH 330
GI PF C C++SF++ L H H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.8 bits (70), Expect = 0.077
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIH 416
GI PF C C++SF++ L H H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.0 bits (68), Expect = 0.12
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 107 HQLVHSGERNVKCDICGLALTTKSHLNRHMLVH 139
+G + +C C + + HL H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 29.6 bits (67), Expect = 0.18
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 412 HLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVH 444
TG FQC C + F +H+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 28.5 bits (64), Expect = 0.41
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 79 HLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVH 111
G K +QC C + F H+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.4 bits (56), Expect = 5.7
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 23 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMH 55
+ + ++PF C C + + L +H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.4 bits (56), Expect = 5.7
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMH 302
+ + ++PF C C + + L +H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.4 bits (56), Expect = 5.7
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMH 388
+ + ++PF C C + + L +H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.4 bits (56), Expect = 5.7
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 497 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMH 529
+ + ++PF C C + + L +H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 42.5 bits (99), Expect = 3e-04
Identities = 84/637 (13%), Positives = 176/637 (27%), Gaps = 194/637 (30%)
Query: 23 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCH----FCNKSFTQKIGLVK 78
H H D E Y+ K ++ V + + F C +++ +
Sbjct: 2 HHHHHMDF-----ETGEHQYQYKD--ILSVFEDAFVDNFDCKDVQDMPKSILSKEE--ID 52
Query: 79 HL----NIHNGTKKYQCHLCGKG------FI---HHTSYKFHQLVHSGERNVKCDICGLA 125
H+ + +GT + L K F+ +YKF L+ +K + +
Sbjct: 53 HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF--LMSP----IKTEQRQPS 106
Query: 126 LTTKSHLNRHMLVHTGDRPH-ECSVCGKRFAKKWNAQVHKKK--------VHGLDVPGTT 176
+ T+ ++ + ++ ++ + +V R + + + G
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVS--RLQPYLKLRQALLELRPAKNVLIDG------- 157
Query: 177 HRVMPVPPIGGGEKEEDVATTDTEDDVPSIKIKFLSALIYFFVSWTFWPLVSQECFLTIG 236
+ G G K D ++ K F + FW L +
Sbjct: 158 ---VL----GSG-KT--WVALDVCLS-YKVQCKM-----DFKI---FW--------LNLK 190
Query: 237 FFFFLTGERACMPLIHECPTCGKKWRTVSELNAHIQTHSD-----LRPFVCEICGQGYKM 291
+ E L W + S+ +++I+ LR + + Y+
Sbjct: 191 NCN--SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS---KPYE- 244
Query: 292 KKALLV--HVGMHNGINPFTCSFC-------NKSFTQKVGLQ--KHLPIHTGSTRFQWEQ 340
LLV +V N F S C K T + H+ + S ++
Sbjct: 245 -NCLLVLLNVQNAKAWNAFNLS-CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302
Query: 341 SH---LNYVWRTVSELNAHIQTHSDLRPFVCEICG----------------QGYKMKKAL 381
L Y+ +L + T + P I K+ +
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTN---PRRLSIIAESIRDGLATWDNWKHVNCDKLTTII 359
Query: 382 LVHVGMHNGINP--------------------------------------FTCSFCNKSF 403
+ N + P S
Sbjct: 360 ESSL---NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416
Query: 404 TQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQK---SFYIHKMVHSGEKPIKCSACGLAVL 460
+K + + I + + L + +H+ + I K S + L
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY-------L 469
Query: 461 SS---SHLKRHFR-VHTGEKPYQCTTC-------GKRLRRTVSELNAHIQTHSDL----- 504
SH+ H + + E+ +++R + NA + L
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529
Query: 505 -RPFVCEICGQGYKMKKAL---LVHVGMHSGIHPFTC 537
+P++C+ + ++ A+ L + + +T
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD 566
Score = 39.1 bits (90), Expect = 0.005
Identities = 60/488 (12%), Positives = 128/488 (26%), Gaps = 142/488 (29%)
Query: 12 KKWRTVSELNAH----IQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGI--------- 58
+ + + +Q + LR + E+ + K +L+ G+ G
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLEL-----RPAKNVLID-GV-LGSGKTWVALDV 170
Query: 59 ---HPFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
+ C K F + + N + L + +
Sbjct: 171 CLSYKVQCKMDFKIFWLNLK---NCNSPETVLEMLQKLL-----YQIDPNWTSRSDHSS- 221
Query: 116 NVKCDICGLALTTKSHLNRHMLVHTGDRPHECS------VCGKRFAKKWNAQV------- 162
N+K I + ++ L R + +P+E V + +N
Sbjct: 222 NIKLRI----HSIQAELRRLLK----SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 163 HKKKVHGLDVPGTTHRVMPVPPIGGGEKEE------DVATTDTEDDVPSIK------IKF 210
K+ L TTH + +E +D + +
Sbjct: 274 FKQVTDFLSAATTTHISL-DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332
Query: 211 LSALIYFFVS-WTFW--------------------PLVSQECFLTIGFFFFLTGERACMP 249
++ I ++ W W P ++ F + F P
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF----------P 382
Query: 250 ---LIHECPT-------CGKKWRTVSELNAHIQTHS----DLRPFVCEICGQGYKMKKAL 295
I PT V + + +S + I ++K L
Sbjct: 383 PSAHI---PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKL 439
Query: 296 LVHVGMHNGI----NPFTCSFCNKSFTQKVGLQ---KHLPIHTGSTR------------- 335
+H I N +F + Q H+ H +
Sbjct: 440 ENEYALHRSIVDHYN-IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498
Query: 336 -FQWEQS---HLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKAL---LVHVGMH 388
F++ + H + W + +Q +P++C+ + ++ A+ L + +
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEEN 558
Query: 389 NGINPFTC 396
+ +T
Sbjct: 559 LICSKYTD 566
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 36.9 bits (86), Expect = 4e-04
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 448 KPIKCSACGLAVLSSSHLKRHFRVHTGEK 476
+ C C A HLKRH+R HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.4 bits (64), Expect = 0.47
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 307 PFTCSFCNKSFTQKVGLQKHLPIHTG 332
F C C ++F ++ L++H HT
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.47
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 393 PFTCSFCNKSFTQKVGLQKHLPIHTG 418
F C C ++F ++ L++H HT
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.1 bits (63), Expect = 0.51
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 118 KCDICGLALTTKSHLNRHMLVHTGDR 143
C++C A + HL RH HT ++
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 26.9 bits (60), Expect = 1.6
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 87 KKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
+ + C +C + F K H H+ E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 25.7 bits (57), Expect = 3.6
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 60 PFTCHFCNKSFTQKIGLVKHLNIHNGTK 87
F C C ++F ++ L +H H K
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 25.7 bits (57), Expect = 3.6
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 534 PFTCHFCNKSFTQKIGLVKHLNIHNGTK 561
F C C ++F ++ L +H H K
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 41.4 bits (96), Expect = 9e-04
Identities = 6/53 (11%), Positives = 12/53 (22%)
Query: 393 PFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHS 445
+ ++ P + +QC +C H H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204
Score = 37.1 bits (85), Expect = 0.017
Identities = 8/53 (15%), Positives = 13/53 (24%)
Query: 60 PFTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFHQLVHS 112
+ ++ V + YQCH+C H H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204
Score = 35.6 bits (81), Expect = 0.049
Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 448 KPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSD 503
A V + YQC C L + +L+AH+ +H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVL-FSPLDLDAHVASHGL 205
Score = 34.4 bits (78), Expect = 0.11
Identities = 10/52 (19%), Positives = 16/52 (30%)
Query: 32 PFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIH 83
+ E A + S H + CH C+ + L H+ H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.4 bits (78), Expect = 0.11
Identities = 10/52 (19%), Positives = 16/52 (30%)
Query: 506 PFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIH 557
+ E A + S H + CH C+ + L H+ H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.1 bits (77), Expect = 0.14
Identities = 11/87 (12%), Positives = 25/87 (28%)
Query: 330 HTGSTRFQWEQSHLNYVWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHN 389
T ++ N + R+ + N + + E A + +
Sbjct: 117 KAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTAS 176
Query: 390 GINPFTCSFCNKSFTQKVGLQKHLPIH 416
+ + C C+ + L H+ H
Sbjct: 177 SGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.1 bits (77), Expect = 0.14
Identities = 7/52 (13%), Positives = 15/52 (28%)
Query: 279 PFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPIH 330
+ E A + + + + C C+ + L H+ H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.19
Identities = 7/54 (12%), Positives = 12/54 (22%)
Query: 419 STRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVH 472
+ + + S +C C + S L H H
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 31.7 bits (71), Expect = 0.80
Identities = 8/50 (16%), Positives = 10/50 (20%)
Query: 7 CPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHS 56
T S + C +C L HV H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204
Score = 31.4 bits (70), Expect = 0.98
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 110 VHSGERNVKCDICGLALTTKSHLNRHMLVH 139
S +C +C L + L+ H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 31.0 bits (69), Expect = 1.3
Identities = 8/59 (13%), Positives = 15/59 (25%), Gaps = 1/59 (1%)
Query: 118 KCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVHGLDVPGTT 176
+ ++ + ++C VC + H HGL T
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAH-VASHGLHGNMTL 211
Score = 31.0 bits (69), Expect = 1.3
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 5 HECPTCGKKWRTVSELNAHIQTHSD 29
++C C + +L+AH+ +H
Sbjct: 181 YQCHVCSAVLFSPLDLDAHVASHGL 205
Score = 31.0 bits (69), Expect = 1.3
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 252 HECPTCGKKWRTVSELNAHIQTHSD 276
++C C + +L+AH+ +H
Sbjct: 181 YQCHVCSAVLFSPLDLDAHVASHGL 205
Score = 31.0 bits (69), Expect = 1.4
Identities = 16/94 (17%), Positives = 24/94 (25%), Gaps = 4/94 (4%)
Query: 254 CPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHN--GINPFTCS 311
T S + C +C L HV H G T S
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSS 214
Query: 312 FCNKSFTQKVGLQKHLPIHTGSTRF--QWEQSHL 343
+ T+ + ++ PI S + L
Sbjct: 215 EIQRHITEFISSWQNHPIVQVSADVENKKTAQLL 248
Score = 31.0 bits (69), Expect = 1.5
Identities = 8/39 (20%), Positives = 10/39 (25%)
Query: 492 SELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHS 530
T S + C +C L HV H
Sbjct: 166 PARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 34.8 bits (79), Expect = 0.003
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 87 KKYQCHLCGKGFIHHTSYKFHQLVHSGERNVK 118
K +QC CG+ F + S HQ++H G++N
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG 42
Score = 28.2 bits (62), Expect = 0.75
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 445 SGEKPIKCSACGLAVLSSSHLKRHFRVHTGEK 476
S EK +C CG L H +H G+K
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 27.9 bits (61), Expect = 0.89
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 60 PFTCHFCNKSFTQKIGLVKHLNIHNGTKK 88
C C + F Q + L++H +H G K
Sbjct: 12 SHQCRECGEIFFQYVSLIEHQVLHMGQKN 40
Score = 27.9 bits (61), Expect = 0.89
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 534 PFTCHFCNKSFTQKIGLVKHLNIHNGTKK 562
C C + F Q + L++H +H G K
Sbjct: 12 SHQCRECGEIFFQYVSLIEHQVLHMGQKN 40
Score = 27.1 bits (59), Expect = 1.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 422 FQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSA 454
QC CG+ F S H+++H G+K S+
Sbjct: 13 HQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS 45
Score = 25.2 bits (54), Expect = 9.9
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 112 SGERNVKCDICGLALTTKSHLNRHMLVHTGDR 143
S E++ +C CG L H ++H G +
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 34.3 bits (78), Expect = 0.004
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 111 HSGERNVKCDICGLALTTKSHLNRHMLVHT 140
SG+R C IC A TTK++ RH+ VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 32.8 bits (74), Expect = 0.015
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGS 333
+G PF C C +FT K +HL +HT +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 32.8 bits (74), Expect = 0.015
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGS 419
+G PF C C +FT K +HL +HT +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 32.0 bits (72), Expect = 0.024
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHT 473
SG++P C C A + ++ RH +VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 30.5 bits (68), Expect = 0.081
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGT 86
SG PF C C +FT K +HL +H T
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 30.5 bits (68), Expect = 0.081
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGT 560
SG PF C C +FT K +HL +H T
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 28.2 bits (62), Expect = 0.53
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 139 HTGDRPHECSVCGKRFAKKWNAQVHKK 165
+G RP C +C F K N H K
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK 28
Score = 25.1 bits (54), Expect = 8.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 27 HSDLRPFVCEICGQGYKMKKALLVHVGMHS 56
S RPFVC IC + K H+ +H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 25.1 bits (54), Expect = 8.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 501 HSDLRPFVCEICGQGYKMKKALLVHVGMHS 530
S RPFVC IC + K H+ +H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 33.7 bits (78), Expect = 0.006
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 448 KPIKCS--ACGLAVLSSSHLKRHFRVHTGEK 476
+P C+ CG S L+RH R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 30.3 bits (69), Expect = 0.082
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 307 PFTCSF--CNKSFTQKVGLQKHLPIHTG 332
PF C++ C K FT+ LQ+H HTG
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 30.3 bits (69), Expect = 0.082
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 393 PFTCSF--CNKSFTQKVGLQKHLPIHTG 418
PF C++ C K FT+ LQ+H HTG
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 26.8 bits (60), Expect = 1.6
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 60 PFTCHF--CNKSFTQKIGLVKHLNIHNGTK 87
PF C + C K FT+ L +H H G K
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.8 bits (60), Expect = 1.6
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 534 PFTCHF--CNKSFTQKIGLVKHLNIHNGTK 561
PF C + C K FT+ L +H H G K
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 25.6 bits (57), Expect = 4.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 122 CGLALTTKSHLNRHMLVHTGDR 143
CG T L RH HTG++
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 33.9 bits (78), Expect = 0.006
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 445 SGEKPIKCS--ACGLAVLSSSHLKRHFRVHTGEK 476
+K C CG +SHL+ H R HTGE+
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 27.7 bits (62), Expect = 0.93
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 112 SGERNVKCDI--CGLALTTKSHLNRHMLVHTGDR 143
++ C I CG SHL H+ HTG+R
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 26.2 bits (58), Expect = 3.2
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 307 PFTCSF--CNKSFTQKVGLQKHLPIHTG 332
C C K + + L+ HL HTG
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTG 35
Score = 26.2 bits (58), Expect = 3.2
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 393 PFTCSF--CNKSFTQKVGLQKHLPIHTG 418
C C K + + L+ HL HTG
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTG 35
Score = 25.0 bits (55), Expect = 9.2
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Query: 60 PFTCHF--CNKSFTQKIGLVKHLNIHNGTK 87
CH C K + + L HL H G +
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 25.0 bits (55), Expect = 9.2
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Query: 534 PFTCHF--CNKSFTQKIGLVKHLNIHNGTK 561
CH C K + + L HL H G +
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 32.9 bits (74), Expect = 0.014
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 308 FTCSFCNKSFTQKVGLQKHLPIHTG 332
FTC +CNK F K LQ HL IHT
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTN 34
Score = 32.9 bits (74), Expect = 0.014
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 394 FTCSFCNKSFTQKVGLQKHLPIHTG 418
FTC +CNK F K LQ HL IHT
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTN 34
Score = 32.1 bits (72), Expect = 0.021
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 61 FTCHFCNKSFTQKIGLVKHLNIHNGTK 87
FTC +CNK F K L HL IH K
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 32.1 bits (72), Expect = 0.021
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 535 FTCHFCNKSFTQKIGLVKHLNIHNGTK 561
FTC +CNK F K L HL IH K
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 27.9 bits (61), Expect = 0.78
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 28 SDLRPFVCEICGQGYKMKKALLVHVGMHSG 57
S + F CE C + +K K +L H+ +H+
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN 34
Score = 27.9 bits (61), Expect = 0.78
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 502 SDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
S + F CE C + +K K +L H+ +H+
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN 34
Score = 27.5 bits (60), Expect = 1.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 275 SDLRPFVCEICGQGYKMKKALLVHVGMHNG 304
S + F CE C + +K K +L H+ +H
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN 34
Score = 27.5 bits (60), Expect = 1.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 361 SDLRPFVCEICGQGYKMKKALLVHVGMHNG 390
S + F CE C + +K K +L H+ +H
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN 34
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 32.0 bits (72), Expect = 0.021
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 305 INPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+ P+ C C + F LQ+H+ IHTG
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTG 28
Score = 32.0 bits (72), Expect = 0.021
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 391 INPFTCSFCNKSFTQKVGLQKHLPIHTG 418
+ P+ C C + F LQ+H+ IHTG
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTG 28
Score = 31.3 bits (70), Expect = 0.039
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 448 KPIKCSACGLAVLSSSHLKRHFRVHTGEK 476
KP C C L+RH R+HTGEK
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 29.0 bits (64), Expect = 0.33
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 58 IHPFTCHFCNKSFTQKIGLVKHLNIHNGTK 87
+ P+ C C + F L +H+ IH G K
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 29.0 bits (64), Expect = 0.33
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 532 IHPFTCHFCNKSFTQKIGLVKHLNIHNGTK 561
+ P+ C C + F L +H+ IH G K
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 32.2 bits (72), Expect = 0.031
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHTG 474
SGEKP C CGL + H R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.8 bits (71), Expect = 0.041
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 274 HSDLRPFVCEICGQGYKMKKALLVHVGMHNG 304
S +P+ C +CG +K K + HV H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.8 bits (71), Expect = 0.041
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 360 HSDLRPFVCEICGQGYKMKKALLVHVGMHNG 390
S +P+ C +CG +K K + HV H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.8 bits (71), Expect = 0.046
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 139 HTGDRPHECSVCGKRFAKKWNAQVHKKKVHG 169
+G++P+ C VCG RF +K H + G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.4 bits (70), Expect = 0.058
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 27 HSDLRPFVCEICGQGYKMKKALLVHVGMHSG 57
S +P+ C +CG +K K + HV H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.4 bits (70), Expect = 0.058
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 501 HSDLRPFVCEICGQGYKMKKALLVHVGMHSG 531
S +P+ C +CG +K K + HV H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.0 bits (69), Expect = 0.064
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 472 HTGEKPYQCTTCGKRLRRTVSELNAHIQTHS 502
+GEKPY C CG R +R ++ H+++H
Sbjct: 5 SSGEKPYSCPVCGLRFKRK-DRMSYHVRSHD 34
Score = 29.1 bits (64), Expect = 0.34
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 55 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGT 86
SG P++C C F +K + H+ H+G+
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
Score = 29.1 bits (64), Expect = 0.34
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 529 HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGT 560
SG P++C C F +K + H+ H+G+
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
Score = 29.1 bits (64), Expect = 0.35
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 111 HSGERNVKCDICGLALTTKSHLNRHMLVHTG 141
SGE+ C +CGL K ++ H+ H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 27.2 bits (59), Expect = 1.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 302 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGS 333
+G P++C C F +K + H+ H GS
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
Score = 27.2 bits (59), Expect = 1.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGS 419
+G P++C C F +K + H+ H GS
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
Score = 25.3 bits (54), Expect = 9.9
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 83 HNGTKKYQCHLCGKGFIHHTSYKFHQLVHSG 113
+G K Y C +CG F +H H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 31.3 bits (70), Expect = 0.045
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 448 KPIKCSACGLAVLSSSHLKRHFRVHTGEK 476
KP KC C A ++L H R HTGEK
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 29.0 bits (64), Expect = 0.31
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 118 KCDICGLALTTKSHLNRHMLVHTGDR 143
KC C A K++LN H+ HTG++
Sbjct: 11 KCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 24.8 bits (53), Expect = 9.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 307 PFTCSFCNKSFTQKVGLQKHLPIHTG 332
P+ C C+ + K L HL HTG
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 24.8 bits (53), Expect = 9.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 393 PFTCSFCNKSFTQKVGLQKHLPIHTG 418
P+ C C+ + K L HL HTG
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTG 34
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 33.0 bits (74), Expect = 0.048
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 253 ECPTCGK-KWRTVSELNAHIQT-HSDLRPFVCEICGQGYKMKKALLVHVGMHNGINP 307
CPTC +T+ L H++ C+ C + +K K L H + P
Sbjct: 26 VCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 33.0 bits (74), Expect = 0.057
Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Query: 280 FVCEICGQ-GYKMKKALLVHVGM-HNGINPFTCSFCNKSFTQKVGLQKHL 327
VC C K L H+ + + C C K F K GL H
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT 74
Score = 33.0 bits (74), Expect = 0.057
Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Query: 366 FVCEICGQ-GYKMKKALLVHVGM-HNGINPFTCSFCNKSFTQKVGLQKHL 413
VC C K L H+ + + C C K F K GL H
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT 74
Score = 32.6 bits (73), Expect = 0.076
Identities = 15/58 (25%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Query: 33 FVCEICGQ-GYKMKKALLVHVGM-HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKK 88
VC C K L H+ + C C K F K GL H + K
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 32.6 bits (73), Expect = 0.076
Identities = 15/58 (25%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Query: 507 FVCEICGQ-GYKMKKALLVHVGM-HSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKK 562
VC C K L H+ + C C K F K GL H + K
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 32.2 bits (72), Expect = 0.086
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 6 ECPTCGK-KWRTVSELNAHIQT-HSDLRPFVCEICGQGYKMKKALLVHV 52
CPTC +T+ L H++ C+ C + +K K L H
Sbjct: 26 VCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT 74
Score = 29.9 bits (66), Expect = 0.54
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 394 FTCSFCNKSFTQKV-GLQKHLPI-HTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPI 450
C CN + + GL+KH+ + +C C K+F + H M KP
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS 83
Score = 28.8 bits (63), Expect = 1.5
Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 445 SGEKPIKCSACGLAVLSSSH-LKRHFRV-HTGEKPYQCTTCGKRLRRTVSELNAHIQTHS 502
C C + + LK+H V + +C C K+ ++ + LN H
Sbjct: 20 HERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQF-KSKAGLNYHTMAEH 78
Query: 503 DLRP 506
+P
Sbjct: 79 SAKP 82
Score = 28.0 bits (61), Expect = 2.9
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 61 FTCHFCNKSFTQKI-GLVKHL-NIHNGTKKYQCHLCGKGFIHHTSYKFHQLV 110
C CN + + GL KH+ +C C K F +H +
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMA 76
Score = 28.0 bits (61), Expect = 2.9
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 348 RTVSELNAHIQT-HSDLRPFVCEICGQGYKMKKALLVHVGMHNGINP 393
+T+ L H++ C+ C + +K K L H + P
Sbjct: 36 KTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 30.2 bits (67), Expect = 0.12
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 445 SGEKPIKCSACGLAVLSSSHLKRHFRVHTGEK 476
S KP KCS C A S S+LK H H+ EK
Sbjct: 5 SSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
Score = 25.6 bits (55), Expect = 5.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 112 SGERNVKCDICGLALTTKSHLNRHMLVHTGDR 143
S + KC +C A +KS+L HM H+ ++
Sbjct: 5 SSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
C2H2, APO metal-binding, nucleus, phosphoprotein,
transcription, TRAN regulation; 1.80A {Homo sapiens}
Length = 48
Score = 30.1 bits (67), Expect = 0.15
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 142 DRPHECSVCGKRFAKKWNAQVHKKKVHGLDVPGTTHRVMPVPP 184
D+P+ C +CGKR+ + H H + G P
Sbjct: 5 DKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGEDKEDSQPPT 47
Score = 28.6 bits (63), Expect = 0.55
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 278 RPFVCEICGQGYKMKKALLVHVGMHNGINP 307
+P+ C+ICG+ YK + L H +
Sbjct: 6 KPYACDICGKRYKNRPGLSYHYAHSHLAEE 35
Score = 28.6 bits (63), Expect = 0.55
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 364 RPFVCEICGQGYKMKKALLVHVGMHNGINP 393
+P+ C+ICG+ YK + L H +
Sbjct: 6 KPYACDICGKRYKNRPGLSYHYAHSHLAEE 35
Score = 27.8 bits (61), Expect = 1.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 31 RPFVCEICGQGYKMKKALLVHVG 53
+P+ C+ICG+ YK + L H
Sbjct: 6 KPYACDICGKRYKNRPGLSYHYA 28
Score = 27.8 bits (61), Expect = 1.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 505 RPFVCEICGQGYKMKKALLVHVG 527
+P+ C+ICG+ YK + L H
Sbjct: 6 KPYACDICGKRYKNRPGLSYHYA 28
Score = 25.1 bits (54), Expect = 9.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 475 EKPYQCTTCGKRLR 488
+KPY C CGKR +
Sbjct: 5 DKPYACDICGKRYK 18
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 30.2 bits (67), Expect = 0.16
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 444 HSGEKPIKCSACGLAVLSSSHLKRHFRVHT 473
EK KC+ C S +L +H R+HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 27.1 bits (59), Expect = 1.7
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 111 HSGERNVKCDICGLALTTKSHLNRHMLVHT 140
E+ KC+ C + +L +H +HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC,
gtpas activation, metal-binding, phorbol-ester binding,
SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Length = 463
Score = 33.3 bits (76), Expect = 0.19
Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 21/90 (23%)
Query: 424 CDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTC 483
C+ C M + +KC+ CGL V H + V P C
Sbjct: 223 CEYCANF-----------MWGLIAQGVKCADCGLNV----HKQCSKMV-----PNDCKPD 262
Query: 484 GKRLRRTV-SELNAHIQTHSDLRPFVCEIC 512
K +++ +L ++ H+ RP V ++C
Sbjct: 263 LKHVKKVYSCDLTTLVKAHTTKRPMVVDMC 292
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 31.3 bits (70), Expect = 0.21
Identities = 17/90 (18%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Query: 409 LQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIH-KMVHSG---EKPIKCSACGLAVLSSSH 464
+ ++C C + F H H C C
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65
Query: 465 LKRH-FRVHTGEKPYQCTTCGKRLRRTVSE 493
L H + H GE+ ++ T KR +T+ E
Sbjct: 66 LSEHNLKYHPGEENFKLTMV-KRNNQTIFE 94
Score = 31.3 bits (70), Expect = 0.22
Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 4/72 (5%)
Query: 101 HTSYKFHQLVHSGERNVKCDICGLALTTKSHLNRHM-LVHTG---DRPHECSVCGKRFAK 156
H + +Q E +C C + H+ H + + C C +
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 157 KWNAQVHKKKVH 168
H K H
Sbjct: 63 YDALSEHNLKYH 74
Score = 30.1 bits (67), Expect = 0.48
Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGM-HNGIN---PFTCSFCNKSFTQKVGLQK 325
+ Q + C+ C HV H + + C CN + L +
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 326 H-LPIHTGSTRFQW 338
H L H G F+
Sbjct: 69 HNLKYHPGEENFKL 82
Score = 29.0 bits (64), Expect = 1.2
Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGM-HNGIN---PFTCSFCNKSFTQKVGLQK 411
+ Q + C+ C HV H + + C CN + L +
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 412 H-LPIHTGSTRFQCDL 426
H L H G F+ +
Sbjct: 69 HNLKYHPGEENFKLTM 84
Score = 27.4 bits (60), Expect = 5.0
Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 5/78 (6%)
Query: 239 FFLTGERACMPLIHECPTCGKKWRTVSELNAHIQT-HSDLR---PFVCEICGQGYKMKKA 294
+ + +EC C + ++ H+ + H ++ +VC C K A
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65
Query: 295 LLVHV-GMHNGINPFTCS 311
L H H G F +
Sbjct: 66 LSEHNLKYHPGEENFKLT 83
>4dgw_C PRE-mRNA-splicing factor PRP11; zinc finger; 3.11A {Saccharomyces
cerevisiae}
Length = 231
Score = 32.4 bits (73), Expect = 0.26
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 30/112 (26%)
Query: 151 GKRFAKKWNAQVHKKKVHGLDVPGTT--HRVMP------VPPIG------GGEKEEDVAT 196
G ++++V + V D R++ G E E++A
Sbjct: 117 GMAIQVNYSSEVKENSVDSDDKAKVPPLIRIVSGLELSDTKQKGKKFLVIAYEPFENIAI 176
Query: 197 TDTEDDVPSIKIKFLS---------ALIYFFVSWTFWPLVSQECFLTIGFFF 239
++P +I F + TFW +S+ ++ FFF
Sbjct: 177 -----ELPPNEILFSENNDMDNNNDGVDELNKKCTFWDAISKLYYVQ--FFF 221
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 31.9 bits (72), Expect = 0.32
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 7/33 (21%)
Query: 7 CPTCGKKWRTVSELNAHIQTHSDLRPFVCEICG 39
CP C + E + VC +CG
Sbjct: 24 CPECKVYPPKIVERFSEGDV-------VCALCG 49
Score = 31.9 bits (72), Expect = 0.32
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 7/33 (21%)
Query: 254 CPTCGKKWRTVSELNAHIQTHSDLRPFVCEICG 286
CP C + E + VC +CG
Sbjct: 24 CPECKVYPPKIVERFSEGDV-------VCALCG 49
Score = 29.2 bits (65), Expect = 2.7
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 8/34 (23%)
Query: 480 CTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICG 513
C C + V + D+ VC +CG
Sbjct: 24 CPECKVYPPKIVER-----FSEGDV---VCALCG 49
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 30.6 bits (68), Expect = 0.38
Identities = 14/58 (24%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 394 FTCSFCNK-SFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPI 450
+C C GL+KH+ F C CGK+ H M + P
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS 91
Score = 30.2 bits (67), Expect = 0.48
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 448 KPIKCSACGLAVLSS-SHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRP 506
+ C C + LK+H ++ + C CGK+L R+++ + H+ + + P
Sbjct: 33 GSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQL-RSLAGMKYHVMANHNSLP 90
Query: 507 FVCE 510
Sbjct: 91 SGPS 94
Score = 29.8 bits (66), Expect = 0.60
Identities = 18/87 (20%), Positives = 26/87 (29%), Gaps = 29/87 (33%)
Query: 476 KPYQCTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPF 535
C TC R+T+ L H+ E C Q F
Sbjct: 33 GSVSCPTCQAVGRKTIEGLKKHM-----------ENCKQE------------------MF 63
Query: 536 TCHFCNKSFTQKIGLVKHLNIHNGTKK 562
TCH C K G+ H+ ++ +
Sbjct: 64 TCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 29.8 bits (66), Expect = 0.64
Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 280 FVCEICGQ-GYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHL 327
C C G K + L H+ FTC C K G++ H+
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHV 82
Score = 29.8 bits (66), Expect = 0.64
Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 366 FVCEICGQ-GYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHL 413
C C G K + L H+ FTC C K G++ H+
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHV 82
Score = 29.5 bits (65), Expect = 0.74
Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 33 FVCEICGQ-GYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNIHNGTKK 88
C C G K + L H+ FTCH C K G+ H+ ++ +
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 29.5 bits (65), Expect = 0.83
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 253 ECPTCGK-KWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPF 308
CPTC +T+ L H++ F C CG+ + + HV ++ P
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENCKQ-EMFTCHHCGKQLRSLAGMKYHVMANHNSLPS 91
Score = 29.5 bits (65), Expect = 0.84
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 6 ECPTCGK-KWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHV 52
CPTC +T+ L H++ F C CG+ + + HV
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENCKQ-EMFTCHHCGKQLRSLAGMKYHV 82
Score = 27.5 bits (60), Expect = 3.7
Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Query: 108 QLVHSGERNVKCDICG-LALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKK 166
L + +V C C + T L +HM C CGK+ + H
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMA 84
Query: 167 VHGLDVPG 174
H G
Sbjct: 85 NHNSLPSG 92
Score = 27.1 bits (59), Expect = 5.7
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 61 FTCHFCNK-SFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFH 107
+C C GL KH+ + + CH CGK K+H
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYH 81
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein,
C2H2 type zinc-finger, structural genomics; NMR {Mus
musculus} SCOP: g.37.1.2 g.37.1.2
Length = 79
Score = 29.8 bits (67), Expect = 0.39
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 280 FVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQ 319
F C CG+ K K + HV +C C K F
Sbjct: 11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG 49
Score = 29.8 bits (67), Expect = 0.39
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 366 FVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQ 405
F C CG+ K K + HV +C C K F
Sbjct: 11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG 49
Score = 29.4 bits (66), Expect = 0.54
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 33 FVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQ 72
F C CG+ K K + HV +C C K F
Sbjct: 11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG 49
Score = 29.4 bits (66), Expect = 0.54
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 507 FVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQ 546
F C CG+ K K + HV +C C K F
Sbjct: 11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG 49
Score = 28.7 bits (64), Expect = 1.1
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 61 FTCHFCNKSFTQKIGLVKHLNIHNGTKKYQCHLCGKGFIHHTSYKFH 107
FTC+ C +S KI + KH++ + C CGK F YK H
Sbjct: 11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDF-WGDDYKSH 55
Score = 27.5 bits (61), Expect = 3.0
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 394 FTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRF 431
FTC+ C +S K+ ++KH+ C CGK F
Sbjct: 11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDF 47
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 28.6 bits (63), Expect = 0.43
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 448 KPIKCSACGLAVLSSSHLKRHFRVHTGEK 476
KP +C CG A +S L H R HTGEK
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 27.0 bits (59), Expect = 1.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 31 RPFVCEICGQGYKMKKALLVHVGMHSG 57
+P C +CG+ + +L+ HV H+G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 27.0 bits (59), Expect = 1.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 505 RPFVCEICGQGYKMKKALLVHVGMHSG 531
+P C +CG+ + +L+ HV H+G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 26.7 bits (58), Expect = 1.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 278 RPFVCEICGQGYKMKKALLVHVGMHNG 304
+P C +CG+ + +L+ HV H G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 26.7 bits (58), Expect = 1.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 364 RPFVCEICGQGYKMKKALLVHVGMHNG 390
+P C +CG+ + +L+ HV H G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 26.3 bits (57), Expect = 2.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 60 PFTCHFCNKSFTQKIGLVKHLNIHNGTK 87
P C C K+FTQ L+ H+ H G K
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 26.3 bits (57), Expect = 2.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 534 PFTCHFCNKSFTQKIGLVKHLNIHNGTK 561
P C C K+FTQ L+ H+ H G K
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 24.7 bits (53), Expect = 8.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 423 QCDLCGKRFIHQKSFYIHKMVHSGEK 448
QC +CGK F S H H+GEK
Sbjct: 4 QCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 24.7 bits (53), Expect = 8.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 307 PFTCSFCNKSFTQKVGLQKHLPIHTG 332
P C C K+FTQ L H+ HTG
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 24.7 bits (53), Expect = 8.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 393 PFTCSFCNKSFTQKVGLQKHLPIHTG 418
P C C K+FTQ L H+ HTG
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 24.7 bits (53), Expect = 9.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 87 KKYQCHLCGKGFIHHTSYKFHQLVHSGER 115
K QC +CGK F +S H H+GE+
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 28.7 bits (63), Expect = 0.47
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 418 GSTRFQCDLCGKRFIHQKSFYIHKMVHSGE 447
T +C CGK F H H+ +H+GE
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGE 38
Score = 26.8 bits (58), Expect = 2.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 90 QCHLCGKGFIHHTSYKFHQLVHSGE 114
+C CGK F H + HQ +H+GE
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAGE 38
Score = 26.8 bits (58), Expect = 2.5
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 445 SGEKPIKCSACGLAVLSSSHLKRHFRVHTGE 475
+ + +C CG SS L H +H GE
Sbjct: 8 AAKTTSECQECGKIFRHSSLLIEHQALHAGE 38
Score = 26.4 bits (57), Expect = 3.5
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 60 PFTCHFCNKSFTQKIGLVKHLNIHNG 85
C C K F L++H +H G
Sbjct: 12 TSECQECGKIFRHSSLLIEHQALHAG 37
Score = 26.4 bits (57), Expect = 3.5
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 534 PFTCHFCNKSFTQKIGLVKHLNIHNG 559
C C K F L++H +H G
Sbjct: 12 TSECQECGKIFRHSSLLIEHQALHAG 37
Score = 26.0 bits (56), Expect = 5.3
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 307 PFTCSFCNKSFTQKVGLQKHLPIHTGST 334
C C K F L +H +H G +
Sbjct: 12 TSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 26.0 bits (56), Expect = 5.3
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 393 PFTCSFCNKSFTQKVGLQKHLPIHTGST 420
C C K F L +H +H G +
Sbjct: 12 TSECQECGKIFRHSSLLIEHQALHAGES 39
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 32.3 bits (73), Expect = 0.50
Identities = 30/151 (19%), Positives = 46/151 (30%), Gaps = 30/151 (19%)
Query: 388 HNGINPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGE 447
P CS C F G Q FQC +C +H++ H+ V
Sbjct: 43 RFFKQPTFCSHC-TDFIWGFGKQG----------FQCQVC-SFVVHKRC---HEFV---- 83
Query: 448 KPIKCSACGLAVLSSSHLKRH-FRVHTGEKPYQCTTCGKRL--------RRTVSELNAHI 498
C S +H F++HT P C CG L + +N H
Sbjct: 84 -TFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHK 142
Query: 499 QTHSDLRPFVCEICGQGYKMKKALLVHVGMH 529
+ P +C + + + H+
Sbjct: 143 RCV-MNVPSLCGTDHTERRGRIYIQAHIDRE 172
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL conjugation,
UBL conjugation pathway; 2.20A {Homo sapiens}
Length = 170
Score = 30.4 bits (68), Expect = 0.82
Identities = 14/100 (14%), Positives = 28/100 (28%), Gaps = 3/100 (3%)
Query: 421 RFQCDLCGKRFIHQKSFYIHKMVHS-GEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQ 479
+C + + + + F + +KC G + H
Sbjct: 53 GHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMD 112
Query: 480 CTTCGKRLRRTVSELNAHIQTHSDLRPFVCEICGQGYKMK 519
C C + ++ +N HI R C+ C +
Sbjct: 113 CPQCQRPFQKF--HINIHILKDCPRRQVSCDNCAASMAFE 150
Score = 27.4 bits (60), Expect = 9.5
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 247 CMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMK 292
C + +CP C + ++ +N HI R C+ C +
Sbjct: 106 CEFALMDCPQCQRPFQK-FHINIHILKDCPRRQVSCDNCAASMAFE 150
>3oio_A Transcriptional regulator (ARAC-type DNA-binding containing
proteins); PSI-2, midwest center for structural
genomics; 1.65A {Chromobacterium violaceum}
Length = 113
Score = 29.8 bits (68), Expect = 0.83
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Query: 440 HKMVHSGEKPIK--CSACGLAVLSSSHLKRHFRVHTGEKPYQ 479
+++ K I ACG + S H +R H P +
Sbjct: 65 RQLLQQTSKSIVQIGLACGFS--SGPHFSSTYRNHFNITPRE 104
Score = 29.5 bits (67), Expect = 1.2
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 460 LSSSHLKRHFRVHTGEKPYQ 479
+S L+R F+ + G P +
Sbjct: 35 VSRRQLERLFKQYLGTVPSK 54
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 30.9 bits (69), Expect = 0.83
Identities = 7/61 (11%), Positives = 16/61 (26%)
Query: 23 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNI 82
I+ LR + E + +H + G + L +++
Sbjct: 171 DIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHL 230
Query: 83 H 83
Sbjct: 231 S 231
Score = 30.9 bits (69), Expect = 0.83
Identities = 7/61 (11%), Positives = 16/61 (26%)
Query: 497 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHSGIHPFTCHFCNKSFTQKIGLVKHLNI 556
I+ LR + E + +H + G + L +++
Sbjct: 171 DIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHL 230
Query: 557 H 557
Sbjct: 231 S 231
Score = 30.9 bits (69), Expect = 0.93
Identities = 9/74 (12%), Positives = 17/74 (22%), Gaps = 7/74 (9%)
Query: 356 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPI 415
I+ LR + E + +H + G + L+ +
Sbjct: 171 DIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPI-- 228
Query: 416 HTGSTRFQCDLCGK 429
GK
Sbjct: 229 -----HLSVLRQGK 237
Score = 30.6 bits (68), Expect = 1.3
Identities = 7/62 (11%), Positives = 16/62 (25%)
Query: 270 HIQTHSDLRPFVCEICGQGYKMKKALLVHVGMHNGINPFTCSFCNKSFTQKVGLQKHLPI 329
I+ LR + E + +H + G + L+ + +
Sbjct: 171 DIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHL 230
Query: 330 HT 331
Sbjct: 231 SV 232
Score = 29.8 bits (66), Expect = 1.8
Identities = 8/53 (15%), Positives = 18/53 (33%)
Query: 424 CDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEK 476
+ KR IH+ + GEK ++ + + L+ + +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
Score = 28.6 bits (63), Expect = 5.3
Identities = 6/53 (11%), Positives = 15/53 (28%)
Query: 3 LIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMH 55
+ K+ ++S+ H + E Q + L + +
Sbjct: 179 RVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 28.6 bits (63), Expect = 5.3
Identities = 6/53 (11%), Positives = 15/53 (28%)
Query: 250 LIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEICGQGYKMKKALLVHVGMH 302
+ K+ ++S+ H + E Q + L + +
Sbjct: 179 RVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 27.5 bits (60), Expect = 0.99
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 143 RPHECSVCGKRFAKKWNAQVHKK 165
RP+ CSVCGKRF+ K + H +
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYR 24
Score = 27.1 bits (59), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 305 INPFTCSFCNKSFTQKVGLQKHLPIHTG 332
+ P++CS C K F+ K ++ H +HTG
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 27.1 bits (59), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 391 INPFTCSFCNKSFTQKVGLQKHLPIHTG 418
+ P++CS C K F+ K ++ H +HTG
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.3 bits (57), Expect = 2.3
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 30 LRPFVCEICGQGYKMKKALLVHVGMHSG 57
+RP+ C +CG+ + +K + H +H+G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.3 bits (57), Expect = 2.3
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 504 LRPFVCEICGQGYKMKKALLVHVGMHSG 531
+RP+ C +CG+ + +K + H +H+G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 3.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 448 KPIKCSACGLAVLSSSHLKRHFRVHTG 474
+P CS CG ++ H+RVHTG
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 3.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 277 LRPFVCEICGQGYKMKKALLVHVGMHNG 304
+RP+ C +CG+ + +K + H +H G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 3.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 363 LRPFVCEICGQGYKMKKALLVHVGMHNG 390
+RP+ C +CG+ + +K + H +H G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 27.5 bits (61), Expect = 1.4
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 475 EKPYQCT--TCGKRLRRTVSELNAHIQTHSDLR 505
+K ++C C K +R + + +HIQTH + R
Sbjct: 16 DKTFECLFPGCTKTFKRRYN-IRSHIQTHLEDR 47
Score = 26.0 bits (57), Expect = 5.2
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 306 NPFTCSF--CNKSFTQKVGLQKHLPIHTG 332
F C F C K+F ++ ++ H+ H
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 26.0 bits (57), Expect = 5.2
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 392 NPFTCSF--CNKSFTQKVGLQKHLPIHTG 418
F C F C K+F ++ ++ H+ H
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
>1njq_A Superman protein; zinc-finger, peptide-zinc complex,
beta-BETA-ALFA motif, metal binding protein; NMR
{Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 27.0 bits (60), Expect = 1.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 61 FTCHFCNKSFTQKIGLVKHLNIH 83
+TC FC + F L H+N+H
Sbjct: 7 YTCSFCKREFRSAQALGGHMNVH 29
Score = 27.0 bits (60), Expect = 1.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 535 FTCHFCNKSFTQKIGLVKHLNIH 557
+TC FC + F L H+N+H
Sbjct: 7 YTCSFCKREFRSAQALGGHMNVH 29
Score = 25.5 bits (56), Expect = 6.0
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 87 KKYQCHLCGKGFIHHTSYKFHQLVHSGERN 116
+ Y C C + F + H VH +R
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVHRRDRA 34
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 27.1 bits (60), Expect = 1.5
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 143 RPHECSVCGKRFAKKWNAQVHKKKVHGLDV 172
+ + C +C + F ++ H +K+H ++
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL 30
Score = 25.6 bits (56), Expect = 4.7
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 60 PFTCHFCNKSFTQKIGLVKHL-NIHNGT 86
+ C CN++FT++ L++H IH+G
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSGN 29
Score = 25.6 bits (56), Expect = 4.7
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 534 PFTCHFCNKSFTQKIGLVKHL-NIHNGT 560
+ C CN++FT++ L++H IH+G
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSGN 29
Score = 24.8 bits (54), Expect = 7.7
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 307 PFTCSFCNKSFTQKVGLQKHL-PIHTGS 333
+ C CN++FT++ L +H IH+G+
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSGN 29
Score = 24.8 bits (54), Expect = 7.7
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 393 PFTCSFCNKSFTQKVGLQKHL-PIHTGS 419
+ C CN++FT++ L +H IH+G+
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSGN 29
>3mn2_A Probable ARAC family transcriptional regulator; structural
genomics, PSI-2, protein structure initiative; 1.80A
{Rhodopseudomonas palustris}
Length = 108
Score = 28.7 bits (65), Expect = 1.8
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 455 CGLAVLSSSHLKRHFRVHTGEKPYQ 479
L +SS + + F+ G P
Sbjct: 25 TALTGISSRGIFKAFQRSRGYSPMA 49
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 26.8 bits (59), Expect = 1.8
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 61 FTCHFCNKSFTQKIGLVKHLNIHNGTKK 88
F C C K F + L KH+ +H +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 26.8 bits (59), Expect = 1.8
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 535 FTCHFCNKSFTQKIGLVKHLNIHNGTKK 562
F C C K F + L KH+ +H +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 24.9 bits (54), Expect = 9.9
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 6 ECPTCGKKWRTVSELNAHIQTHSDLRP 32
CP C K++ L+ HI H L
Sbjct: 4 ACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 24.9 bits (54), Expect = 9.9
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 253 ECPTCGKKWRTVSELNAHIQTHSDLRP 279
CP C K++ L+ HI H L
Sbjct: 4 ACPECPKRFMRSDHLSKHITLHELLGE 30
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 28.0 bits (62), Expect = 2.0
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 440 HKMVHSGEKPIKCSACGLAVLSSSHLKRHFRVHTGEKPYQCTTCGKRLRRTVSELNAHIQ 499
H+ + C C L + S LK H + G + C CG+ + +L H +
Sbjct: 8 HEETECPLRLAVCQHCDLEL-SILKLKEH-EDYCGARTELCGNCGRNVLV--KDLKTHPE 63
Query: 500 THS 502
Sbjct: 64 VCG 66
Score = 27.3 bits (60), Expect = 2.9
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Query: 393 PFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEK 448
C C+ + L++H + G+ C CG+ + K H V E
Sbjct: 17 LAVCQHCDLELSIL-KLKEHE-DYCGARTELCGNCGRN-VLVKDLKTHPEVCGREG 69
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding,
metal-binding, phosphoprotein, exchange factor, RAC,
GTPase, membrane domain; 1.85A {Mus musculus} PDB:
3bji_A 1f5x_A
Length = 406
Score = 29.8 bits (67), Expect = 2.6
Identities = 15/65 (23%), Positives = 20/65 (30%), Gaps = 11/65 (16%)
Query: 111 HSGERNVKCDICGLALTTKSHLNRHMLVHTGDRPHECSVCGKRFAKKWNAQVHKKKVHGL 170
S E C C + L T + + C C K+ +V HG
Sbjct: 352 FSFEETTSCKACQMLLRG-----------TFYQGYRCYRCRAPAHKECLGRVPPCGRHGQ 400
Query: 171 DVPGT 175
D GT
Sbjct: 401 DFAGT 405
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 26.3 bits (57), Expect = 2.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 424 CDLCGKRFIHQKSFYIHKMVHSGE 447
CD+CGK+F + + HK++H+ +
Sbjct: 12 CDMCGKKFKSKGTLKSHKLLHTAD 35
Score = 25.9 bits (56), Expect = 3.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 112 SGERNVKCDICGLALTTKSHLNRHMLVHTGD 142
S + CD+CG +K L H L+HT D
Sbjct: 5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
Score = 25.9 bits (56), Expect = 3.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 84 NGTKKYQCHLCGKGFIHHTSYKFHQLVHSGE 114
+ K + C +CGK F + K H+L+H+ +
Sbjct: 5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron
transfer, DIIR center, oxidoreductase; 1.40A
{Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1
PDB: 1yv1_A 1yux_A
Length = 202
Score = 28.9 bits (64), Expect = 3.6
Identities = 11/65 (16%), Positives = 15/65 (23%), Gaps = 20/65 (30%)
Query: 408 GLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHLKR 467
+ C +CG +H GE KC C K
Sbjct: 158 AAYNDIDAPDDDKFHLCPICG-------------YIHKGEDFEKCPICF-------RPKD 197
Query: 468 HFRVH 472
F +
Sbjct: 198 TFTAY 202
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger,
bromodomain, H4K16 acetylation, breast C
transcription-protein binding complex; HET: ALY; 1.70A
{Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Length = 184
Score = 28.8 bits (64), Expect = 3.9
Identities = 13/95 (13%), Positives = 21/95 (22%), Gaps = 4/95 (4%)
Query: 415 IHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSSHL--KRHFRVH 472
G C+ C K F H + + + C+ C
Sbjct: 10 CQNGGELLCCEKCPKVF-HLSCH-VPTLTNFPSGEWICTFCRDLSKPEVEYDCDAPSHNS 67
Query: 473 TGEKPYQCTTCGKRLRRTVSELNAHIQTHSDLRPF 507
+K +R L + H F
Sbjct: 68 EKKKTEGLVKLTPIDKRKCERLLLFLYCHEMSLAF 102
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR),
beta-hairpin, alpha-solenoi transport protein; 2.60A
{Bos taurus}
Length = 320
Score = 29.2 bits (65), Expect = 4.0
Identities = 13/69 (18%), Positives = 19/69 (27%), Gaps = 23/69 (33%)
Query: 392 NPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIK 451
NPF C S+ PI+ G +C L G + K
Sbjct: 260 NPF--DICAASYR---------PIYRGKPVEKCPLSGACY------------SPEFKGQI 296
Query: 452 CSACGLAVL 460
C + +
Sbjct: 297 CKVTTVTEI 305
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4
tetrahedral Zn+2, antiparallel beta strand and alpha
helix, NESG project; NMR {Escherichia coli} SCOP:
g.39.1.9
Length = 68
Score = 26.8 bits (59), Expect = 4.1
Identities = 12/43 (27%), Positives = 14/43 (32%), Gaps = 8/43 (18%)
Query: 243 GERACMPLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEIC 285
G + CPTCGK S RPF + C
Sbjct: 1 GSHMSETITVNCPTCGKT--------VVWGEISPFRPFCSKRC 35
Score = 26.4 bits (58), Expect = 5.0
Identities = 11/37 (29%), Positives = 13/37 (35%), Gaps = 8/37 (21%)
Query: 2 PLIHECPTCGKKWRTVSELNAHIQTHSDLRPFVCEIC 38
+ CPTCGK S RPF + C
Sbjct: 7 TITVNCPTCGKT--------VVWGEISPFRPFCSKRC 35
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein
complex I, protein TRAN; 2.90A {Saccharomyces
cerevisiae} PDB: 3mv3_A
Length = 325
Score = 28.5 bits (63), Expect = 5.7
Identities = 8/69 (11%), Positives = 17/69 (24%), Gaps = 23/69 (33%)
Query: 392 NPFTCSFCNKSFTQKVGLQKHLPIHTGSTRFQCDLCGKRFIHQKSFYIHKMVHSGEKPIK 451
F C ++ PI+ + L G ++ EK
Sbjct: 269 AKF--DICAATYK---------PIYEDTPSVSDPLTGSKY------------VITEKDKI 305
Query: 452 CSACGLAVL 460
++ +
Sbjct: 306 DRIAMISKI 314
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 25.1 bits (54), Expect = 5.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 61 FTCHFCNKSFTQKIGLVKHLNIHN 84
+ C C +SF +K L +H +H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 25.1 bits (54), Expect = 5.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 535 FTCHFCNKSFTQKIGLVKHLNIHN 558
+ C C +SF +K L +H +H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 24.7 bits (53), Expect = 9.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 308 FTCSFCNKSFTQKVGLQKHLPIH 330
+ C C +SF +K L +H +H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVH 24
Score = 24.7 bits (53), Expect = 9.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 394 FTCSFCNKSFTQKVGLQKHLPIH 416
+ C C +SF +K L +H +H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVH 24
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain,
ablim2, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: g.39.1.3 g.39.1.3
Length = 81
Score = 26.7 bits (59), Expect = 6.0
Identities = 10/42 (23%), Positives = 12/42 (28%), Gaps = 6/42 (14%)
Query: 422 FQCDLCGKRFIHQKSFYIHKMVHSGEKPIKCSACGLAVLSSS 463
F C +C F + K C C L V S
Sbjct: 42 FVCAVCRLPFPPGDRVTFN------GKECMCQKCSLPVSVSG 77
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 25.2 bits (55), Expect = 6.9
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 61 FTCHFCNKSFTQKIGLVKHLNIHNGTK 87
F C C K F + L H+ +H K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 25.2 bits (55), Expect = 6.9
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 535 FTCHFCNKSFTQKIGLVKHLNIHNGTK 561
F C C K F + L H+ +H K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 24.7 bits (53), Expect = 8.4
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 476 KPYQCTTCGKRLRRTVSELNAHIQTH 501
KPY C CGKR ++ S+L HI+ H
Sbjct: 1 KPYVCERCGKRFVQS-SQLANHIRHH 25
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.326 0.138 0.465
Gapped
Lambda K H
0.267 0.0515 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,666,914
Number of extensions: 508894
Number of successful extensions: 5788
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4820
Number of HSP's successfully gapped: 2284
Length of query: 566
Length of database: 6,701,793
Length adjustment: 99
Effective length of query: 467
Effective length of database: 3,937,614
Effective search space: 1838865738
Effective search space used: 1838865738
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.4 bits)