Query psy1826
Match_columns 169
No_of_seqs 112 out of 1403
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 17:22:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1826.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1826hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fa8_A Secreted protein BARF1; 99.7 1.1E-16 3.9E-21 112.8 12.2 114 3-120 25-147 (203)
2 3rbs_A Myomesin-1; immunoglobu 99.7 1.3E-14 4.6E-19 102.4 17.6 137 4-161 33-190 (207)
3 3mj8_L Stimulatory hamster ant 99.6 4E-15 1.4E-19 104.6 11.2 95 27-123 58-160 (213)
4 1epf_A NCAM, protein (neural c 99.6 1.2E-14 4.3E-19 100.2 13.4 141 3-162 32-175 (191)
5 2r15_A Myomesin-1; sarcomeric 99.6 3.6E-14 1.2E-18 99.3 15.7 110 3-125 32-163 (212)
6 2v44_A NCAM2, neural cell adhe 99.6 1.7E-14 5.7E-19 99.5 13.5 137 5-161 32-170 (189)
7 2yd1_A Tyrosine-protein phosph 99.6 5.9E-14 2E-18 98.7 16.5 110 4-124 36-155 (212)
8 2yd6_A PTPRD protein; hydrolas 99.6 9E-14 3.1E-18 97.8 17.4 108 4-123 36-152 (212)
9 2j8h_A Titin, connectin; cardi 99.6 1.7E-14 5.9E-19 100.0 13.2 110 4-124 34-149 (197)
10 2wv3_A Neuroplastin; igcam, me 99.6 9.8E-14 3.4E-18 95.8 16.2 80 41-122 56-137 (190)
11 2iep_A Muscle-specific kinase 99.6 3.1E-14 1E-18 98.2 13.3 107 4-124 37-145 (192)
12 3kld_A Contactin 4, axcam, BIG 99.6 2.5E-14 8.7E-19 109.3 13.9 81 42-124 259-340 (384)
13 2a38_A Titin; Z1Z2, structural 99.6 1.2E-13 4.1E-18 95.4 16.1 110 4-124 35-148 (194)
14 3sbw_C Programmed cell death 1 99.6 1.3E-13 4.4E-18 97.3 16.1 117 3-122 35-160 (222)
15 2jll_A NCAM2, neural cell adhe 99.6 7.3E-14 2.5E-18 106.3 15.8 115 4-124 30-145 (389)
16 3b43_A Titin; I-SET IG fold, e 99.6 4.6E-14 1.6E-18 113.2 14.9 139 4-161 414-553 (570)
17 2rik_A Titin; I-SET IG fold, p 99.6 1E-13 3.5E-18 101.3 15.5 108 4-124 129-237 (284)
18 4f80_A Butyrophilin subfamily 99.6 1.2E-13 4.1E-18 98.1 15.2 116 2-119 35-159 (226)
19 3b43_A Titin; I-SET IG fold, e 99.6 6.8E-14 2.3E-18 112.2 15.1 108 4-124 321-429 (570)
20 1rhf_A Tyrosine-protein kinase 99.6 3.4E-14 1.2E-18 97.4 11.5 81 41-123 60-143 (182)
21 1dee_B IGM RF 2A2; FAB-IBP com 99.6 8.4E-14 2.9E-18 99.0 13.4 95 27-122 65-172 (223)
22 3tv3_L PGT128 light chain, IG 99.6 2.1E-14 7.3E-19 100.8 9.7 94 27-122 56-156 (211)
23 3lcy_A Titin; A-BAND, IG tande 99.6 2.5E-13 8.4E-18 93.8 14.9 108 4-124 37-148 (197)
24 3s96_B 3B5H10 FAB light chain; 99.6 5.9E-14 2E-18 98.8 11.8 93 28-123 64-167 (218)
25 3r06_A Anti-mouse CD3epsilon a 99.6 2.4E-14 8.1E-19 100.6 9.6 118 4-123 31-158 (213)
26 1c1e_H Catalytic antibody 1E9 99.6 2.1E-14 7.4E-19 101.4 9.4 93 27-120 65-167 (219)
27 1hng_A CD2; T lymphocyte adhes 99.6 4E-13 1.4E-17 92.3 15.5 108 4-124 28-140 (176)
28 1nqb_A Single-chain antibody f 99.5 1.6E-13 5.5E-18 99.6 14.0 93 27-119 65-168 (256)
29 3nl4_L Antigen binding fragmen 99.5 1.1E-13 3.8E-18 97.2 12.5 117 3-122 30-158 (213)
30 3p3y_A Neurofascin; IG domains 99.5 1.4E-13 4.9E-18 105.0 13.7 81 42-124 276-357 (404)
31 2va4_A NCAM2, N-CAM 2, neural 99.5 6.5E-13 2.2E-17 91.4 15.3 103 4-122 34-139 (192)
32 3jz7_A MCAR, CAR, coxsackievir 99.5 8.5E-14 2.9E-18 97.3 11.0 89 27-117 69-160 (214)
33 2v5m_A Dscam; neurobiology SPL 99.5 2.9E-13 9.9E-18 103.0 14.8 108 4-122 242-350 (388)
34 3d9a_H Heavy chain of hyhel10 99.5 4.2E-14 1.4E-18 99.4 9.4 93 27-120 64-161 (210)
35 2rik_A Titin; I-SET IG fold, p 99.5 1.5E-12 5.3E-17 94.9 18.1 108 4-124 35-144 (284)
36 2c5d_C AXL oncogene, tyrosine- 99.5 1.7E-13 5.8E-18 95.0 12.2 82 41-124 68-152 (195)
37 3nl4_H Antigen binding fragmen 99.5 1.7E-13 5.9E-18 96.6 11.9 93 27-121 63-164 (215)
38 1f97_A Junction adhesion molec 99.5 2.1E-13 7.2E-18 95.2 12.0 114 3-124 30-151 (212)
39 2yd9_A Receptor-type tyrosine- 99.5 5.9E-13 2E-17 98.3 15.0 108 4-123 36-152 (304)
40 3laf_A Deleted in colorectal c 99.5 1.9E-13 6.5E-18 104.4 12.6 106 4-124 251-357 (403)
41 2wng_A Tyrosine-protein phosph 99.5 1.6E-13 5.5E-18 102.4 11.9 156 4-162 34-200 (327)
42 1qz1_A Neural cell adhesion mo 99.5 3.3E-13 1.1E-17 98.8 13.4 109 4-123 33-144 (291)
43 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 9.7E-14 3.3E-18 98.3 9.9 94 27-121 67-171 (222)
44 1gsm_A Madcam-1, mucosal addre 99.5 2.6E-13 9E-18 96.0 11.9 119 42-162 60-189 (210)
45 2ghw_B Anti-SARS SCFV antibody 99.5 9.6E-13 3.3E-17 94.5 15.1 91 27-119 67-177 (247)
46 3ejj_X Macrophage colony-stimu 99.5 4.4E-13 1.5E-17 98.0 13.4 105 5-123 121-231 (289)
47 2v5t_A NCAM2, N-CAM 2, neural 99.5 4.4E-13 1.5E-17 92.0 12.4 107 4-124 32-143 (189)
48 1lk3_L 9D7 light chain; antige 99.5 4.3E-13 1.5E-17 94.1 12.6 95 27-123 58-157 (210)
49 3d9a_L Light chain of hyhel10 99.5 1.9E-13 6.4E-18 96.0 10.5 94 28-123 60-158 (213)
50 3k0w_A Mucosa-associated lymph 99.5 9.8E-13 3.4E-17 93.0 14.1 80 42-123 66-162 (218)
51 1moe_A Anti-CEA MAB T84.66; an 99.5 6.3E-13 2.2E-17 95.0 13.3 112 3-116 34-158 (240)
52 1dn0_B IGM-kappa cold agglutin 99.5 1.2E-12 4.2E-17 93.6 14.7 95 27-122 64-172 (232)
53 2nzi_A Titin; IG-domain, FNIII 99.5 4.9E-13 1.7E-17 98.5 12.9 109 4-123 34-148 (305)
54 2pet_A Lutheran blood group gl 99.5 1.3E-12 4.3E-17 92.6 14.4 119 42-162 78-209 (231)
55 1cs6_A Axonin-1; neural cell a 99.5 4.9E-13 1.7E-17 101.6 13.0 80 42-123 258-338 (382)
56 3sgj_C Human FCG3A receptor; r 99.5 4.4E-13 1.5E-17 94.2 11.7 78 42-122 55-132 (204)
57 2xzc_L FAB A.17 light chain; i 99.5 2.2E-13 7.4E-18 96.0 10.1 117 4-123 32-160 (216)
58 3juy_B 3B3 single chain varian 99.5 1.2E-12 4.2E-17 94.6 14.2 88 27-115 71-186 (256)
59 3sob_L Antibody light chain; b 99.5 1.5E-13 5.3E-18 97.8 9.3 119 3-123 53-181 (237)
60 1q0x_L FAB 9B1, light chain; a 99.5 3.3E-13 1.1E-17 94.8 10.8 118 4-123 33-161 (212)
61 3qhz_H Human monoclonal antibo 99.5 6.5E-13 2.2E-17 94.8 12.3 94 27-120 69-175 (232)
62 2ocw_A Polymeric-immunoglobuli 99.5 2.2E-12 7.4E-17 103.3 16.6 114 4-118 33-152 (585)
63 2c1o_A IGK-C protein; FAB frag 99.5 2.3E-13 7.7E-18 98.2 9.9 119 3-123 72-200 (254)
64 2ocw_A Polymeric-immunoglobuli 99.5 2.1E-12 7E-17 103.4 16.3 96 27-123 392-490 (585)
65 2ec8_A MAST/stem cell growth f 99.5 2.5E-12 8.6E-17 101.8 16.6 81 42-124 274-359 (524)
66 1pz5_B Heavy chain of FAB (SYA 99.5 2.7E-13 9.1E-18 95.9 9.8 92 27-119 67-167 (220)
67 2x1w_L Vascular endothelial gr 99.5 3.9E-13 1.3E-17 94.8 10.5 79 42-120 65-148 (213)
68 3umt_A SCFV heavy chain and li 99.5 1.8E-12 6.3E-17 93.7 14.3 88 27-116 67-175 (256)
69 1op3_H FAB 2G12, heavy chain; 99.5 2E-13 6.8E-18 97.2 9.0 93 27-120 65-171 (225)
70 1za6_B IGG heavy chain; immuno 99.5 3.3E-13 1.1E-17 101.7 10.6 94 27-120 65-163 (344)
71 2d3v_A Leukocyte immunoglobuli 99.5 2.4E-13 8.2E-18 94.6 9.1 113 40-162 57-176 (196)
72 3uzq_A Anti-dengue MAB 4E11; d 99.5 1.6E-12 5.6E-17 93.8 13.6 88 27-116 66-174 (253)
73 1c5d_H Monoclonal antibody aga 99.5 5.6E-13 1.9E-17 94.2 10.9 93 27-120 64-165 (215)
74 3bae_H WO2 IGG2A FAB fragment 99.5 3E-13 1E-17 96.4 9.5 93 27-120 66-173 (228)
75 2y25_A Myomesin; structural pr 99.5 9.6E-13 3.3E-17 97.3 12.6 109 3-124 137-267 (317)
76 1vca_A VCAM-D1,2, human vascul 99.5 7.6E-13 2.6E-17 92.9 11.3 83 41-123 54-138 (202)
77 1bih_A Hemolin; insect immunit 99.5 8.8E-13 3E-17 100.4 12.5 80 42-123 271-353 (395)
78 3nfj_J T cell receptor beta ch 99.5 4.4E-13 1.5E-17 96.2 10.3 96 27-123 61-170 (245)
79 3bkj_L WO2 IGG2A FAB fragment 99.5 4.1E-13 1.4E-17 96.9 10.0 119 3-123 68-196 (252)
80 1mju_H Immunoglobulin MS6-12; 99.5 9.7E-13 3.3E-17 93.8 11.7 93 27-120 65-164 (227)
81 3r4d_A CEA-related cell adhesi 99.5 3.6E-12 1.2E-16 88.9 14.4 87 28-124 63-154 (208)
82 3pv7_A B7-H6, IG-like domain-c 99.5 2.7E-13 9.4E-18 97.4 8.9 80 39-120 80-161 (248)
83 4ei6_B Vbeta16 XV19 type II na 99.5 5.7E-13 2E-17 95.6 10.5 94 28-123 64-170 (245)
84 1qok_A MFE-23 recombinant anti 99.5 3.5E-12 1.2E-16 93.7 14.9 90 27-119 91-203 (282)
85 1nbq_A JAM, junctional adhesio 99.5 2.6E-13 8.9E-18 94.5 8.4 113 3-124 33-153 (209)
86 4frw_A Poliovirus receptor-rel 99.5 1.7E-12 5.7E-17 90.6 12.5 83 39-123 77-162 (218)
87 3grw_A Fibroblast growth facto 99.5 3.1E-12 1E-16 91.2 14.1 109 4-124 45-163 (241)
88 1fnl_A Low affinity immunoglob 99.5 1.6E-12 5.4E-17 88.9 12.1 78 42-122 55-132 (175)
89 1svz_A Immunoglobulin;, single 99.5 3.2E-12 1.1E-16 91.8 14.2 112 3-116 35-166 (247)
90 1f3r_B FV antibody fragment; I 99.4 1.9E-12 6.5E-17 93.8 13.1 90 27-118 64-180 (257)
91 3pl6_D MBP peptide / T-cell re 99.4 4.2E-13 1.4E-17 97.7 9.6 94 28-123 88-192 (268)
92 3esu_F Antibody 14B7* light ch 99.4 1.5E-12 5.3E-17 93.6 12.4 110 5-116 35-170 (250)
93 2fbj_H IGA-kappa J539 FAB (hea 99.4 8.4E-13 2.9E-17 93.6 10.8 93 27-120 65-166 (220)
94 3liz_H 4C3 monoclonal antibody 99.4 6.2E-13 2.1E-17 96.3 10.2 93 27-120 65-167 (253)
95 3bp6_B Programmed cell death 1 99.4 9E-13 3.1E-17 91.8 10.6 107 3-120 36-144 (202)
96 4dzb_B Vbeta2 (MAIT T cell rec 99.4 3.6E-13 1.2E-17 96.7 8.6 95 28-123 65-171 (246)
97 3m8o_H Immunoglobulin A1 heavy 99.4 1.2E-12 4.1E-17 92.6 11.1 93 27-121 67-168 (221)
98 1oll_A NK receptor; immune sys 99.4 1.6E-12 5.6E-17 89.9 11.5 109 40-163 56-170 (188)
99 2y23_A Myomesin; structural pr 99.4 1.9E-12 6.6E-17 95.5 12.6 140 3-161 31-185 (312)
100 3oq3_B IFN-alpha/beta binding 99.4 6.1E-12 2.1E-16 94.1 15.4 102 4-120 159-273 (329)
101 3p2t_A Leukocyte immunoglobuli 99.4 2.1E-12 7.1E-17 89.7 12.0 113 40-162 57-175 (196)
102 2rcj_C Light chain; immunoglob 99.4 3.9E-12 1.3E-16 100.7 14.9 118 4-123 30-160 (523)
103 4fom_A Poliovirus receptor-rel 99.4 1.2E-12 4E-17 96.8 11.2 83 39-123 72-159 (308)
104 1qz1_A Neural cell adhesion mo 99.4 1.3E-12 4.6E-17 95.5 11.4 107 4-124 130-241 (291)
105 1hxm_B Gamma-delta T-cell rece 99.4 1.6E-12 5.4E-17 93.5 11.4 94 26-120 65-176 (242)
106 3gkz_A Anti-methamphetamine si 99.4 3.3E-12 1.1E-16 92.3 13.1 89 27-116 72-179 (257)
107 1dr9_A B7-1 (CD80), T lymphocy 99.4 2.1E-11 7.3E-16 84.7 16.7 77 41-123 65-151 (201)
108 3ux9_B SCFV antibody; five hel 99.4 3.2E-12 1.1E-16 92.3 12.8 112 3-116 33-173 (256)
109 2vol_A Murine IGG FC; FC, zinc 99.4 5.5E-13 1.9E-17 93.7 8.5 81 42-122 69-154 (207)
110 3b5h_A Cervical EMMPRIN, HAB18 99.4 9.8E-12 3.4E-16 85.2 14.6 69 42-115 52-120 (184)
111 1nfd_E H57 FAB; complex (immun 99.4 5E-13 1.7E-17 93.8 8.2 95 27-123 57-159 (212)
112 3s97_C Contactin-1; carbonic a 99.4 2.6E-12 8.7E-17 88.9 11.6 106 4-122 40-156 (201)
113 2p1y_A Bispecific alpha/beta T 99.4 6.7E-12 2.3E-16 89.5 14.0 88 27-117 60-165 (238)
114 3qs7_E FL cytokine receptor; i 99.4 1.2E-12 4E-17 101.7 10.8 79 42-124 291-371 (423)
115 1itb_B Type 1 interleukin-1 re 99.4 4.3E-12 1.5E-16 93.9 13.3 105 4-124 139-254 (315)
116 1nkr_A P58-CL42 KIR; inhibitor 99.4 1.6E-11 5.5E-16 85.7 15.5 77 42-122 64-149 (201)
117 3q5y_A TCR N15 beta; IG, T cel 99.4 2.3E-12 8E-17 92.2 11.2 95 27-123 62-168 (240)
118 2wim_A N-CAM 2, NCAM2, neural 99.4 2E-12 6.9E-17 94.5 11.0 106 5-122 34-141 (291)
119 2yd9_A Receptor-type tyrosine- 99.4 3.2E-12 1.1E-16 94.3 12.2 108 4-124 138-250 (304)
120 2y23_A Myomesin; structural pr 99.4 2.2E-11 7.6E-16 89.7 16.6 138 3-161 137-295 (312)
121 2fbo_J V1V2;, variable region- 99.4 2.7E-12 9.4E-17 91.9 11.3 81 40-122 89-179 (250)
122 2if7_A SLAM family member 6; N 99.4 5.6E-12 1.9E-16 87.7 12.5 87 28-121 62-152 (193)
123 2znx_A SCFV; fluorotryptohpan, 99.4 3.6E-12 1.2E-16 91.6 11.9 111 4-116 31-161 (242)
124 3bn9_D E2 FAB heavy chain; ant 99.4 1.3E-12 4.5E-17 95.2 9.7 93 27-120 65-176 (257)
125 1f2q_A High affinity immunoglo 99.4 1.4E-12 5E-17 89.1 9.4 78 42-122 52-129 (176)
126 1e07_A Carcinoembryonic antige 99.4 3.7E-12 1.3E-16 103.1 13.3 105 3-122 495-602 (642)
127 1bec_A 14.3.D T cell antigen r 99.4 4.1E-12 1.4E-16 91.0 12.0 96 27-123 59-167 (238)
128 2gi7_A GPVI protein; IG-like d 99.4 4.9E-12 1.7E-16 87.2 11.8 106 42-162 53-164 (184)
129 3ojm_B Fibroblast growth facto 99.4 5.8E-12 2E-16 88.9 12.5 81 42-124 77-167 (231)
130 2wim_A N-CAM 2, NCAM2, neural 99.4 3.3E-12 1.1E-16 93.4 11.4 107 4-124 128-239 (291)
131 4i0k_A CD276 antigen; immunogl 99.4 3.8E-12 1.3E-16 89.7 11.2 117 3-121 29-154 (222)
132 2xqy_G A13-D6.3 monoclonal ant 99.4 3.2E-12 1.1E-16 93.2 11.1 94 27-121 71-173 (261)
133 4dep_C Interleukin-1 receptor 99.4 9.1E-12 3.1E-16 93.5 13.6 111 4-122 48-168 (349)
134 1ugn_A LIR1, leukocyte immunog 99.4 1.5E-12 5.2E-17 90.6 8.7 111 42-162 59-177 (198)
135 3eow_R Poliovirus receptor; im 99.4 1.1E-12 3.7E-17 92.8 7.9 114 4-119 34-157 (221)
136 4fqp_A Poliovirus receptor; im 99.4 4.9E-12 1.7E-16 93.8 11.8 119 4-123 35-162 (313)
137 4dkd_C Macrophage colony-stimu 99.4 9.5E-13 3.3E-17 96.3 7.7 107 4-124 120-232 (292)
138 3qib_D 2B4 beta chain; IG doma 99.4 3.1E-12 1.1E-16 93.2 10.2 93 29-123 90-195 (270)
139 3u2s_H PG9 heavy chain; greek 99.4 4.3E-12 1.5E-16 91.8 10.8 94 27-120 64-184 (248)
140 4fqp_A Poliovirus receptor; im 99.4 1.4E-11 4.9E-16 91.3 13.9 109 4-122 148-261 (313)
141 1qgc_4 Protein (immunoglobulin 99.4 3.9E-12 1.3E-16 98.2 10.9 95 27-122 283-388 (438)
142 1hzh_H IGG, immunoglobulin hea 99.4 2.9E-12 9.8E-17 100.0 10.2 93 27-120 65-175 (457)
143 2vr9_A Roundabout 1, ROBO; imm 99.4 3.1E-12 1E-16 89.9 9.3 79 43-123 71-153 (217)
144 4dep_C Interleukin-1 receptor 99.4 2.3E-12 7.7E-17 96.9 9.2 104 4-122 155-273 (349)
145 3tv3_H PGT128 heavy chain, IG 99.4 3E-12 1E-16 92.0 9.3 94 27-120 72-183 (239)
146 2rcj_C Light chain; immunoglob 99.4 1.9E-11 6.7E-16 96.6 14.6 82 42-124 282-368 (523)
147 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.4 6.9E-11 2.3E-15 85.5 16.2 111 3-116 32-173 (256)
148 1jbj_A CD3 epsilon and gamma e 99.4 1.7E-12 5.7E-17 89.9 7.3 77 42-123 45-148 (186)
149 3dmk_A DOWN syndrome cell adhe 99.4 4.7E-12 1.6E-16 105.1 11.3 80 39-120 675-755 (816)
150 3auv_A SC-DSFV derived from th 99.4 1.6E-11 5.6E-16 89.8 12.9 111 4-116 42-173 (276)
151 1ypz_F T-cell receptor gamma c 99.4 3.3E-12 1.1E-16 91.2 8.9 95 26-121 64-175 (230)
152 3n9g_H FAB fragment of MAB CR4 99.4 8.6E-12 2.9E-16 89.0 11.1 92 27-120 65-169 (230)
153 1hnf_A CD2; T lymphocyte adhes 99.4 6.8E-11 2.3E-15 81.8 15.3 104 4-120 31-141 (182)
154 2gki_A Nuclease; anti-DNA anti 99.4 1.8E-11 6.1E-16 90.4 13.0 90 27-116 87-202 (291)
155 2ny1_B T-cell surface glycopro 99.3 1.1E-11 3.8E-16 85.1 11.0 108 4-120 25-138 (184)
156 3qs9_E FL cytokine receptor; i 99.3 2.4E-12 8.2E-17 102.7 8.7 79 42-124 291-371 (527)
157 1uct_A Immunoglobulin alpha FC 99.3 7.2E-12 2.4E-16 88.9 10.1 107 42-162 65-177 (218)
158 2rgs_A I, IG gamma-2B heavy ch 99.3 3.4E-12 1.2E-16 90.4 8.3 110 4-121 45-161 (218)
159 2gjj_A A21 single-chain antibo 99.3 2.6E-11 9E-16 88.3 13.3 112 3-116 40-177 (264)
160 2j6e_L IGM, FAB light chain; a 99.3 1E-12 3.5E-17 93.5 5.6 95 27-123 79-181 (234)
161 2wbj_D OB TCR; transmembrane, 99.3 3.8E-12 1.3E-16 93.3 8.7 96 27-123 87-196 (279)
162 1igt_B IGG2A intact antibody - 99.3 9.6E-12 3.3E-16 96.6 11.3 93 27-120 65-166 (444)
163 1qgc_4 Protein (immunoglobulin 99.3 1E-11 3.5E-16 95.9 11.3 117 4-123 35-162 (438)
164 3laf_A Deleted in colorectal c 99.3 4.7E-11 1.6E-15 91.1 14.8 108 4-124 151-266 (403)
165 1x9q_A SCFV, 4M5.3 anti-fluore 99.3 2.2E-11 7.6E-16 88.7 12.3 112 3-116 49-190 (268)
166 3ry4_A Low affinity immunoglob 99.3 1.6E-11 5.5E-16 83.0 10.8 78 42-122 52-129 (170)
167 2w59_A IGY FCU3-4; immunoglobu 99.3 4.6E-12 1.6E-16 90.6 8.3 80 42-124 78-165 (231)
168 3u83_A Poliovirus receptor-rel 99.3 2.9E-11 9.8E-16 90.0 12.7 79 42-122 195-276 (331)
169 1e07_A Carcinoembryonic antige 99.3 3.6E-11 1.2E-15 97.3 14.3 104 4-122 318-424 (642)
170 2wng_A Tyrosine-protein phosph 99.3 1.5E-11 5E-16 91.8 11.1 80 42-123 181-266 (327)
171 2o26_X MAST/stem cell growth f 99.3 9.6E-12 3.3E-16 91.1 9.9 77 42-120 146-230 (290)
172 1p6f_A NKP46, natural cytotoxi 99.3 3.3E-11 1.1E-15 86.9 12.5 108 41-163 60-173 (242)
173 3fku_X Neutralizing antibody F 99.3 1E-11 3.6E-16 91.2 10.0 89 27-115 65-177 (280)
174 2v9r_A Roundabout homolog 1; p 99.3 3.1E-11 1.1E-15 84.2 11.9 80 43-124 74-157 (212)
175 3o3u_N Maltose-binding peripla 99.3 2.7E-11 9.4E-16 97.0 13.1 140 4-150 397-547 (581)
176 3oq3_B IFN-alpha/beta binding 99.3 1.1E-11 3.7E-16 92.7 10.0 132 4-162 68-202 (329)
177 1i1c_A IGG2A, IG gamma-2A chai 99.3 4.8E-12 1.6E-16 91.1 7.6 111 4-122 51-168 (239)
178 2dru_A Chimera of CD48 antigen 99.3 3.9E-11 1.3E-15 82.7 11.8 108 3-121 29-142 (180)
179 2wqr_A IG epsilon chain C regi 99.3 4.6E-12 1.6E-16 94.6 7.5 80 42-123 179-265 (323)
180 3omz_A Human vdelta1 gamma del 99.3 4.1E-11 1.4E-15 86.7 12.3 78 38-116 76-174 (259)
181 1oga_E TRBC1, T-cell receptor 99.3 1.4E-11 4.7E-16 89.0 9.7 96 27-123 63-169 (252)
182 1ccz_A Protein (CD58); LFA-3, 99.3 5.7E-11 1.9E-15 81.2 12.2 106 4-122 24-133 (171)
183 3dmk_A DOWN syndrome cell adhe 99.3 4.3E-11 1.5E-15 99.3 13.9 109 4-123 278-387 (816)
184 3to4_D NKT vbeta2 (mouse varia 99.3 8.3E-12 2.8E-16 90.2 8.5 91 29-123 65-170 (253)
185 2ifg_A High affinity nerve gro 99.3 5.9E-12 2E-16 95.0 7.9 80 39-124 210-291 (347)
186 1b6u_A KIR2DL3, P58 killer cel 99.3 1.3E-10 4.5E-15 84.6 14.5 79 41-123 62-149 (257)
187 2o26_X MAST/stem cell growth f 99.3 3.9E-11 1.3E-15 87.8 11.8 77 42-122 58-135 (290)
188 3rjd_A High affinity immunoglo 99.3 7.4E-11 2.5E-15 84.8 12.9 81 42-122 132-218 (262)
189 3mj6_A Junctional adhesion mol 99.3 5.2E-11 1.8E-15 86.1 12.1 86 28-116 71-158 (268)
190 3o4o_C Interleukin-1 receptor 99.3 5.5E-12 1.9E-16 94.4 7.0 107 4-123 55-169 (339)
191 2zg1_A Sialic acid-binding IG- 99.3 1.4E-11 4.7E-16 86.4 8.6 115 3-119 36-167 (214)
192 3sob_H Antibody heavy chain, l 99.3 3.1E-11 1.1E-15 87.4 10.7 91 27-119 88-194 (256)
193 2aty_A Complement receptor chi 99.3 4.1E-11 1.4E-15 91.6 11.8 81 42-122 234-319 (376)
194 3o4o_C Interleukin-1 receptor 99.3 2.7E-12 9.1E-17 96.1 5.0 106 4-122 155-273 (339)
195 1l6x_A Immunoglobulin gamma-1 99.3 1.3E-11 4.4E-16 86.6 8.2 79 43-121 70-153 (207)
196 3u83_A Poliovirus receptor-rel 99.3 1.5E-10 5.1E-15 86.1 14.2 87 27-116 79-173 (331)
197 2y25_A Myomesin; structural pr 99.3 2.1E-12 7E-17 95.5 3.9 137 4-161 37-183 (317)
198 3mlr_H Human monoclonal anti-H 99.3 1.3E-11 4.3E-16 88.0 7.8 87 27-113 65-165 (226)
199 3iu4_H CHP3 FAB heavy chain; a 99.3 1.8E-11 6.1E-16 89.3 8.7 87 27-113 64-163 (263)
200 1iga_A IGA1; immunoglobulin; N 99.3 2.3E-10 8E-15 89.6 15.6 91 27-119 66-169 (475)
201 3bqu_C 3H6 FAB light chain; be 99.3 2.3E-12 7.7E-17 91.7 3.8 84 39-123 91-180 (233)
202 4fmk_A Poliovirus receptor-rel 99.3 3.8E-11 1.3E-15 84.0 9.6 83 39-122 81-165 (225)
203 1ry7_B FGFR-3, fibroblast grow 99.3 2.2E-12 7.7E-17 96.2 3.4 104 4-124 39-168 (334)
204 1sy6_A T-cell surface glycopro 99.2 3.7E-11 1.3E-15 84.4 9.2 76 42-123 50-155 (204)
205 3qs7_E FL cytokine receptor; i 99.2 6.2E-11 2.1E-15 92.0 11.2 77 41-120 103-180 (423)
206 2v5m_A Dscam; neurobiology SPL 99.2 1.4E-11 5E-16 93.5 7.0 81 42-122 60-149 (388)
207 3rjd_A High affinity immunoglo 99.2 8.4E-11 2.9E-15 84.5 10.7 78 42-122 49-126 (262)
208 3vh8_G Killer cell immunoglobu 99.2 6.8E-11 2.3E-15 87.8 10.4 111 42-162 75-194 (316)
209 1igy_B IGG1 intact antibody MA 99.2 4.1E-12 1.4E-16 98.4 3.9 93 27-120 64-162 (434)
210 1iga_A IGA1; immunoglobulin; N 99.2 1.3E-10 4.6E-15 91.0 12.5 82 42-123 310-396 (475)
211 3ejj_X Macrophage colony-stimu 99.2 5.9E-11 2E-15 86.6 9.6 80 42-122 52-134 (289)
212 1itb_B Type 1 interleukin-1 re 99.2 9.3E-12 3.2E-16 92.1 5.0 108 4-124 36-154 (315)
213 1ypz_E T cell receptor delta, 99.2 1.2E-09 4.2E-14 76.7 15.3 114 5-121 31-160 (207)
214 3vh8_G Killer cell immunoglobu 99.2 1.3E-10 4.4E-15 86.3 10.8 77 42-122 175-260 (316)
215 1z7z_I Intercellular adhesion 99.2 7.4E-10 2.5E-14 85.8 15.3 80 41-122 142-234 (450)
216 2ec8_A MAST/stem cell growth f 99.2 9.9E-11 3.4E-15 92.6 10.5 102 4-120 144-253 (524)
217 3f8u_B Tapasin; endoplasmic re 99.2 2.1E-10 7.4E-15 88.0 11.4 78 39-117 252-335 (401)
218 1ry7_B FGFR-3, fibroblast grow 99.2 1.4E-11 4.9E-16 91.8 4.8 80 42-123 181-270 (334)
219 3kld_A Contactin 4, axcam, BIG 99.2 3.7E-10 1.2E-14 86.2 12.4 103 4-121 133-248 (384)
220 1wio_A CD4, T-cell surface gly 99.2 2.6E-10 8.9E-15 86.2 11.4 92 40-162 254-348 (363)
221 4fom_A Poliovirus receptor-rel 99.2 3.9E-11 1.3E-15 88.6 6.5 79 42-122 173-256 (308)
222 1wio_A CD4, T-cell surface gly 99.2 5.4E-11 1.8E-15 90.0 7.2 78 42-122 143-224 (363)
223 1bih_A Hemolin; insect immunit 99.1 6.3E-10 2.1E-14 84.6 12.4 110 4-124 131-257 (395)
224 1ow0_A IG alpha-1 chain C regi 99.1 2.2E-11 7.5E-16 86.0 3.8 82 42-123 67-153 (214)
225 1igt_B IGG2A intact antibody - 99.1 9.4E-11 3.2E-15 91.0 7.4 79 42-121 306-390 (444)
226 1zvo_C Myeloma immunoglobulin 99.1 2.8E-09 9.5E-14 84.6 15.4 91 27-119 66-177 (512)
227 1cs6_A Axonin-1; neural cell a 99.1 1E-09 3.6E-14 83.1 12.3 106 3-121 131-249 (382)
228 3u1s_H FAB PGT145 heavy chain; 99.1 2.5E-10 8.4E-15 83.3 8.0 92 27-120 88-209 (267)
229 1zvo_C Myeloma immunoglobulin 99.1 4E-09 1.4E-13 83.7 15.5 110 3-123 328-447 (512)
230 4acp_A IG gamma-1 chain C regi 99.1 1.5E-10 5.1E-15 83.5 6.6 111 3-121 57-174 (240)
231 1za6_B IGG heavy chain; immuno 99.1 6.6E-11 2.3E-15 89.1 4.9 111 4-122 152-287 (344)
232 3qs9_E FL cytokine receptor; i 99.1 1.1E-09 3.9E-14 87.2 11.2 77 41-121 103-181 (527)
233 3p3y_A Neurofascin; IG domains 99.1 8.5E-10 2.9E-14 84.0 9.6 106 4-124 147-267 (404)
234 3v2a_R Vascular endothelial gr 99.0 4.5E-10 1.5E-14 92.3 8.3 79 42-122 291-373 (772)
235 4dkd_C Macrophage colony-stimu 99.0 1.3E-10 4.4E-15 84.9 4.3 81 40-121 50-133 (292)
236 2oz4_A Intercellular adhesion 99.0 1.8E-09 6.2E-14 78.1 10.2 74 42-121 57-136 (265)
237 1z7z_I Intercellular adhesion 99.0 1.6E-09 5.4E-14 84.0 10.4 79 42-124 51-134 (450)
238 1hxm_A Gamma-delta T-cell rece 99.0 1E-08 3.4E-13 73.3 13.5 116 3-121 32-161 (229)
239 1hzh_H IGG, immunoglobulin hea 99.0 5.6E-10 1.9E-14 87.0 6.7 74 48-122 318-400 (457)
240 3c6l_A TCR 2W20 alpha chain; T 98.5 4.4E-11 1.5E-15 83.0 0.0 113 5-123 31-154 (185)
241 3rgv_A YAE62 TCR A chain; TCR, 99.0 2E-09 7E-14 75.4 7.8 118 4-124 30-156 (200)
242 2oz4_A Intercellular adhesion 99.0 8.1E-10 2.8E-14 80.0 5.7 75 42-118 143-224 (265)
243 2wqr_A IG epsilon chain C regi 98.9 3.8E-10 1.3E-14 84.1 2.5 78 42-120 73-159 (323)
244 3mjg_X Beta-type platelet-deri 98.9 6.1E-09 2.1E-13 76.0 8.4 68 50-119 150-221 (289)
245 3mbe_C I-AG7; T cell receptor, 98.9 5.2E-09 1.8E-13 74.8 7.6 117 4-124 30-157 (229)
246 3knb_B Obscurin-like protein 1 98.9 3.6E-09 1.2E-13 66.7 6.1 64 4-78 43-107 (107)
247 3tjh_C 42F3 alpha; IG MHC, ant 98.9 7.7E-09 2.6E-13 73.8 8.3 94 28-124 69-169 (226)
248 3knb_A Titin; IG-like, titin, 98.9 1.3E-08 4.3E-13 63.4 7.8 77 77-161 5-82 (100)
249 2xot_A Amphoterin-induced prot 98.9 7.5E-09 2.6E-13 78.6 8.0 84 4-111 275-359 (361)
250 3v2a_R Vascular endothelial gr 98.8 5.2E-08 1.8E-12 80.1 13.2 81 42-122 184-269 (772)
251 3m45_A Cell adhesion molecule 98.8 2.9E-08 1E-12 61.8 9.1 73 4-78 36-108 (108)
252 3mjg_X Beta-type platelet-deri 98.8 1.3E-08 4.3E-13 74.3 7.9 74 41-117 51-132 (289)
253 2bnu_A TCR alpha chain, T-cell 98.8 3.3E-08 1.1E-12 69.3 9.4 102 4-111 30-147 (203)
254 1oga_D T-cell receptor alpha c 98.8 3.2E-08 1.1E-12 70.1 8.9 106 3-111 29-144 (215)
255 2yuz_A Myosin-binding protein 98.8 1.7E-08 5.7E-13 62.8 6.5 64 4-79 35-98 (100)
256 1ntl_A CRRY-IG; immunology, co 98.8 1.2E-07 4E-12 76.0 12.9 111 4-121 377-493 (551)
257 3knb_B Obscurin-like protein 1 98.8 4.2E-08 1.4E-12 61.8 8.1 76 76-160 12-87 (107)
258 3gsn_A RA14 TCR alpha chain (T 98.8 7.3E-09 2.5E-13 72.6 5.0 115 4-124 30-156 (199)
259 1igy_B IGG1 intact antibody MA 98.8 5E-09 1.7E-13 81.1 4.6 79 42-121 181-276 (434)
260 4ei6_A Valpha1 XV19 type II na 98.8 1.4E-08 4.8E-13 71.6 6.3 118 4-124 32-161 (208)
261 2ak4_D SB27 T cell receptor al 98.8 4.8E-08 1.6E-12 68.9 8.9 105 4-111 34-151 (211)
262 2kdg_A Myotilin; immonoglobuli 98.7 6.3E-08 2.2E-12 59.6 7.8 78 76-161 4-81 (100)
263 2kkq_A Myotilin; unknown funct 98.7 3.8E-08 1.3E-12 62.7 6.6 67 4-79 45-112 (116)
264 4f9p_D 103.2 anti-BTN3A1 antib 98.7 6.9E-07 2.4E-11 63.8 13.5 112 2-115 30-173 (254)
265 1g1c_A Immunoglobulin-like dom 98.7 1.2E-07 4.2E-12 58.1 8.6 77 77-161 5-81 (99)
266 1kgc_D T-cell receptor alpha c 98.7 7.6E-08 2.6E-12 67.6 8.5 104 5-111 31-146 (206)
267 2q86_A Valpha14 TCR; INKT cell 98.7 4.7E-08 1.6E-12 69.9 7.4 107 4-113 31-146 (229)
268 1iam_A ICAM-1, CD54, intercell 98.7 6.6E-08 2.3E-12 66.9 8.0 80 41-123 50-133 (185)
269 1u2h_A APEG-1, aortic preferen 98.7 1.6E-07 5.5E-12 57.6 8.8 78 76-161 4-81 (99)
270 3rbg_A Cytotoxic and regulator 98.7 1.3E-07 4.3E-12 60.9 8.5 74 4-79 31-104 (124)
271 2edj_A Roundabout homolog 2; K 98.7 6.1E-08 2.1E-12 59.8 6.4 62 4-78 38-100 (100)
272 2cqv_A MLCK, myosin light chai 98.7 2.5E-07 8.5E-12 58.4 9.4 65 4-79 37-102 (114)
273 1zox_A CLM-1; IG-superfamily, 98.6 1.7E-07 5.8E-12 59.2 8.3 75 4-78 32-112 (113)
274 2eo9_A Roundabout homolog 1; b 98.6 3.5E-08 1.2E-12 62.9 5.0 76 4-92 38-116 (118)
275 3knb_A Titin; IG-like, titin, 98.6 5.7E-08 2E-12 60.3 5.6 62 5-75 36-98 (100)
276 2c1o_A IGK-C protein; FAB frag 98.6 7E-08 2.4E-12 69.2 6.7 67 48-116 11-80 (254)
277 3bn3_B ICAM-5, intercellular a 98.6 1.7E-07 5.8E-12 65.4 8.3 80 42-123 53-136 (196)
278 3kvq_A Vascular endothelial gr 98.6 1.3E-07 4.3E-12 59.0 7.0 62 5-79 41-103 (108)
279 2e7c_A Myosin-binding protein 98.6 2.4E-07 8.2E-12 58.9 8.3 62 5-78 55-117 (118)
280 2lu7_A Obscurin-like protein 1 98.6 1E-07 3.5E-12 57.4 5.9 60 4-77 25-84 (84)
281 2dm2_A Palladin; beta-sandwich 98.6 6.4E-08 2.2E-12 60.8 5.2 66 4-78 38-104 (110)
282 1lp9_E T-cell receptor alpha c 98.6 6.8E-08 2.3E-12 67.2 5.8 105 4-111 31-148 (194)
283 1fhg_A Telokin; immunoglobulin 98.6 2.6E-07 8.9E-12 61.7 8.4 70 4-83 71-141 (154)
284 3so5_A LIG-3, leucine-rich rep 98.6 6.3E-07 2.2E-11 55.7 9.6 48 76-123 9-56 (112)
285 2eys_A NKT15; natural killer T 98.6 1.7E-07 5.7E-12 66.1 7.6 101 5-111 34-150 (210)
286 3irg_B Obscurin-like protein 1 98.6 1.2E-07 4.1E-12 59.1 6.1 63 5-78 44-107 (107)
287 1g1c_A Immunoglobulin-like dom 98.6 3.3E-07 1.1E-11 56.1 8.0 62 4-75 35-97 (99)
288 1he7_A High affinity nerve gro 98.6 1.1E-07 3.7E-12 61.7 6.0 39 41-79 63-102 (126)
289 3q0h_A T cell immunoreceptor w 98.6 4.7E-07 1.6E-11 57.8 9.0 71 4-80 35-112 (117)
290 2nw2_A ELS4 TCR alpha chain; T 98.6 3E-07 1E-11 64.3 8.7 105 4-111 29-144 (200)
291 1waa_A Titin; metal binding pr 98.6 5.2E-07 1.8E-11 55.2 8.4 75 77-161 5-79 (93)
292 2v9t_A Roundabout homolog 1; s 98.6 4.6E-08 1.6E-12 62.1 3.6 46 76-123 8-53 (117)
293 2cpc_A KIAA0657 protein; immun 98.6 2.5E-07 8.6E-12 58.2 7.1 66 4-83 42-107 (113)
294 1pko_A Myelin oligodendrocyte 98.6 4.7E-07 1.6E-11 59.2 8.6 77 3-79 38-124 (139)
295 3qp3_A Titin; I-SET IG-like, s 98.6 1.8E-07 6.3E-12 57.8 6.3 47 76-124 7-53 (103)
296 1z9m_A GAPA225; nectin-like, I 98.5 6.1E-07 2.1E-11 59.2 9.1 74 4-79 68-141 (145)
297 1mq8_A ICAM-1, intercellular a 98.5 5.6E-08 1.9E-12 71.9 4.3 81 42-123 143-235 (291)
298 1fhg_A Telokin; immunoglobulin 98.5 3.3E-07 1.1E-11 61.2 7.7 82 72-161 36-117 (154)
299 3qp3_A Titin; I-SET IG-like, s 98.5 6.1E-07 2.1E-11 55.4 8.4 63 4-77 38-101 (103)
300 4hwu_A Fibroblast growth facto 98.5 4.4E-07 1.5E-11 55.4 7.5 60 4-78 29-89 (95)
301 1waa_A Titin; metal binding pr 98.5 1.8E-07 6E-12 57.4 5.7 59 4-76 34-92 (93)
302 2kdg_A Myotilin; immonoglobuli 98.5 2.9E-07 1E-11 56.5 6.7 38 39-76 60-98 (100)
303 3s35_X Vascular endothelial gr 98.5 2.9E-07 1E-11 58.7 6.6 43 42-84 75-118 (122)
304 1zxq_A ICAM-2, intercellular a 98.5 1.3E-06 4.4E-11 60.6 10.3 80 41-122 52-134 (192)
305 4gos_A V-SET domain-containing 98.5 1.5E-07 5.1E-12 60.9 5.2 72 3-74 37-118 (125)
306 3udw_C Poliovirus receptor; PV 98.5 3.1E-07 1.1E-11 57.9 6.6 74 5-78 36-118 (118)
307 2cr6_A KIAA1556 protein, obscu 98.5 5.4E-08 1.9E-12 61.8 3.0 82 71-160 6-88 (115)
308 1neu_A Myelin P0 protein; stru 98.5 5.1E-07 1.8E-11 57.6 7.6 53 27-79 67-122 (124)
309 1wwb_X Protein (brain derived 98.5 2.2E-07 7.6E-12 57.9 5.7 38 42-79 63-101 (103)
310 3puc_A Titin; I-SET IG-like do 98.5 8.6E-07 2.9E-11 54.2 8.3 61 4-75 36-97 (99)
311 3irg_A Titin; IG-like, titin, 98.5 7.4E-07 2.5E-11 54.5 7.8 45 77-123 5-49 (100)
312 2qsq_A Carcinoembryonic antige 98.5 9.1E-07 3.1E-11 56.0 8.3 45 27-76 63-109 (111)
313 2kkq_A Myotilin; unknown funct 98.5 1.6E-06 5.4E-11 55.0 9.4 79 75-161 13-92 (116)
314 1u2h_A APEG-1, aortic preferen 98.5 3.2E-07 1.1E-11 56.2 5.9 62 4-75 35-97 (99)
315 2bk8_A Connectin, M1, titin he 98.5 1.2E-06 4.2E-11 53.4 8.5 61 4-75 32-93 (97)
316 2dav_A SLOW MYBP-C, myosin-bin 98.5 1.3E-06 4.5E-11 56.6 8.9 37 40-76 74-111 (126)
317 2cqv_A MLCK, myosin light chai 98.5 9.1E-07 3.1E-11 55.8 7.9 77 76-161 6-82 (114)
318 3puc_A Titin; I-SET IG-like do 98.4 1.3E-06 4.6E-11 53.3 8.1 47 76-124 5-51 (99)
319 3rrq_A Protein PD-1, programme 98.4 7.4E-07 2.5E-11 57.9 7.2 76 3-78 31-117 (129)
320 4f9l_D 20.1 anti-BTN3A1 antibo 98.4 1.3E-06 4.4E-11 62.7 9.0 109 5-115 32-169 (259)
321 1eaj_A Coxsackie virus and ade 98.4 7.4E-07 2.5E-11 56.6 7.1 50 27-76 74-125 (126)
322 2cr3_A Basic fibroblast growth 98.4 5.7E-07 2E-11 55.4 6.3 58 5-77 33-91 (99)
323 3kvq_A Vascular endothelial gr 98.4 3.4E-07 1.1E-11 57.0 5.2 81 70-161 3-83 (108)
324 3cx2_A Myosin-binding protein 98.4 1.2E-06 4E-11 54.8 7.7 36 40-75 71-107 (108)
325 3mtr_A N-CAM-1, NCAM-1, neural 98.4 6.2E-07 2.1E-11 62.6 7.0 104 4-118 48-156 (215)
326 2edn_A Myosin-binding protein 98.4 6.5E-07 2.2E-11 57.4 6.3 38 40-77 79-117 (118)
327 2oyp_A Hepatitis A virus cellu 98.4 7.5E-07 2.6E-11 55.5 6.5 50 26-75 57-107 (109)
328 1gl4_B Basement membrane-speci 98.4 5.1E-07 1.8E-11 55.3 5.6 34 42-75 63-97 (98)
329 2edh_A Obscurin; structural ge 98.4 9.4E-07 3.2E-11 55.6 7.0 63 4-80 47-109 (113)
330 1wit_A Twitchin 18TH IGSF modu 98.4 6.9E-07 2.4E-11 54.2 6.1 44 77-122 2-47 (93)
331 2nms_A CMRF35-like-molecule 1; 98.4 2.4E-06 8E-11 55.1 8.7 75 4-78 33-113 (124)
332 2yuv_A Myosin-binding protein 98.4 7.3E-07 2.5E-11 54.9 6.0 62 4-79 37-98 (100)
333 1ymm_D T cell receptor alpha c 98.4 3.9E-08 1.3E-12 69.2 0.1 102 4-111 30-146 (207)
334 1hkf_A NKP44, NK cell activati 98.4 3.9E-06 1.3E-10 53.9 9.6 71 4-74 42-119 (122)
335 2ckn_A Basic fibroblast growth 98.4 6.4E-07 2.2E-11 54.7 5.6 55 5-74 39-94 (95)
336 1gxe_A Myosin binding protein 98.4 8.5E-07 2.9E-11 58.5 6.5 47 27-75 91-138 (139)
337 3bfo_A Mucosa-associated lymph 98.4 2.3E-06 8E-11 51.6 8.1 44 79-124 5-48 (91)
338 2or8_A Hepatitis A virus cellu 98.4 7.8E-07 2.7E-11 56.2 6.2 74 4-77 28-110 (116)
339 2or7_A T-cell immunoglobulin a 98.4 1.2E-06 4.2E-11 55.4 6.9 73 3-75 28-109 (115)
340 2dm3_A KIAA0992 protein, palla 98.4 2.7E-07 9.3E-12 57.7 3.7 47 77-125 9-55 (110)
341 2lvc_A Obscurin-like protein 1 98.4 3.1E-07 1.1E-11 56.0 3.9 49 4-63 35-83 (91)
342 2dm2_A Palladin; beta-sandwich 98.4 9.8E-07 3.3E-11 55.2 6.2 46 76-123 7-52 (110)
343 1ncn_A T lymphocyte activation 98.4 4.1E-06 1.4E-10 52.4 9.0 56 4-63 29-91 (110)
344 2bk8_A Connectin, M1, titin he 98.4 5.7E-06 2E-10 50.4 9.5 72 82-161 6-77 (97)
345 3caf_A Fibroblast growth facto 98.4 9.5E-07 3.2E-11 54.2 5.9 33 42-74 66-99 (100)
346 2dm3_A KIAA0992 protein, palla 98.4 1.9E-07 6.6E-12 58.4 2.7 40 39-78 64-104 (110)
347 3bia_X T-cell immunoglobulin a 98.4 2.6E-06 8.8E-11 54.0 8.1 75 4-78 28-113 (116)
348 2lu7_A Obscurin-like protein 1 98.4 1.1E-06 3.6E-11 52.8 5.9 66 85-160 4-69 (84)
349 1wit_A Twitchin 18TH IGSF modu 98.4 2.9E-07 9.8E-12 56.0 3.4 35 40-74 57-92 (93)
350 2edj_A Roundabout homolog 2; K 98.3 2.3E-06 8E-11 52.4 7.6 75 76-161 7-81 (100)
351 2edf_A Obscurin; beta-sandwich 98.3 6.8E-07 2.3E-11 55.3 5.1 62 4-79 37-98 (103)
352 1wwc_A Protein (NT-3 growth fa 98.3 7.4E-07 2.5E-11 56.6 5.3 38 42-79 66-104 (118)
353 2yr3_A Myosin light chain kina 98.3 8E-07 2.7E-11 54.5 5.2 48 74-123 8-55 (99)
354 3bik_B Programmed cell death p 98.3 5.9E-06 2E-10 53.9 9.7 60 4-63 40-105 (134)
355 2eny_A Obscurin; beta-sandwich 98.3 2E-07 7E-12 58.1 2.5 61 5-79 40-100 (104)
356 4gjt_B Poliovirus receptor-rel 98.3 1.2E-06 4E-11 56.3 6.1 49 28-76 66-117 (123)
357 3caf_A Fibroblast growth facto 98.3 1.4E-06 4.7E-11 53.5 6.1 37 86-124 17-53 (100)
358 2lvc_A Obscurin-like protein 1 98.3 1.4E-06 4.9E-11 53.0 6.1 75 77-161 4-80 (91)
359 2yuz_A Myosin-binding protein 98.3 2.1E-06 7.3E-11 53.1 7.0 74 77-161 7-80 (100)
360 3bp6_A Programmed cell death p 98.3 6.1E-06 2.1E-10 52.4 9.2 60 4-63 30-95 (117)
361 3shs_A HOC head outer capsid p 98.3 2.1E-05 7E-10 57.4 12.8 82 42-123 53-144 (304)
362 3irg_B Obscurin-like protein 1 98.3 4.2E-06 1.4E-10 51.8 8.1 47 76-124 12-58 (107)
363 1x44_A Myosin-binding protein 98.3 3.9E-06 1.3E-10 51.8 7.9 73 80-161 10-83 (103)
364 2q87_A CMRF35-H antigen; all-b 98.3 1E-06 3.5E-11 55.3 5.2 75 4-78 27-108 (110)
365 1dlf_H Anti-dansyl immunoglobu 98.3 6.1E-06 2.1E-10 53.0 8.9 36 27-62 67-102 (124)
366 2yr3_A Myosin light chain kina 98.3 8.9E-07 3E-11 54.3 4.7 35 40-74 63-98 (99)
367 2e6p_A Obscurin-like protein 1 98.3 1.1E-06 3.9E-11 54.3 5.2 60 6-79 41-100 (104)
368 3irg_A Titin; IG-like, titin, 98.3 1.4E-06 4.8E-11 53.2 5.6 63 4-75 35-98 (100)
369 1pd6_A Cardiac MYBP-C;, myosin 98.3 2.9E-06 9.9E-11 52.9 7.1 75 77-161 15-91 (104)
370 1x44_A Myosin-binding protein 98.3 9.5E-07 3.3E-11 54.7 4.8 62 4-79 36-99 (103)
371 2dm7_A KIAA1556 protein; beta- 98.3 3.8E-06 1.3E-10 52.3 7.6 64 4-81 36-99 (108)
372 2eny_A Obscurin; beta-sandwich 98.3 7.5E-07 2.6E-11 55.5 4.1 74 79-160 10-83 (104)
373 1nct_A Titin; cell adhesion, g 98.3 1.1E-06 3.6E-11 55.0 4.7 60 5-75 45-105 (106)
374 2xt1_B Camelid VHH 9; viral pr 98.3 6.5E-06 2.2E-10 52.7 8.5 35 27-61 67-101 (121)
375 2e7c_A Myosin-binding protein 98.3 4.3E-06 1.5E-10 53.0 7.7 44 76-121 20-66 (118)
376 3khq_A B-cell antigen receptor 98.3 2.3E-06 8E-11 55.8 6.5 70 4-78 45-119 (133)
377 3qjh_A 5C.C7 alpha chain; immu 98.3 6E-06 2.1E-10 57.9 8.9 99 4-105 32-140 (205)
378 2eo9_A Roundabout homolog 1; b 98.3 2.6E-06 8.9E-11 53.9 6.6 75 76-161 7-81 (118)
379 1kxv_C Camelid VHH domain CAB1 98.3 4.6E-06 1.6E-10 53.3 7.7 61 3-63 31-100 (121)
380 3bj9_1 Immunoglobulin IOTA cha 98.2 3.1E-06 1.1E-10 53.6 6.6 37 27-63 63-99 (116)
381 2ptt_A CD48 antigen; CD244, CD 98.2 7.6E-06 2.6E-10 51.2 8.2 45 28-76 64-108 (110)
382 2cry_A KIN of IRRE-like protei 98.2 1.6E-07 5.3E-12 60.2 0.1 52 68-122 5-57 (122)
383 2eo1_A OBSCN protein, cDNA FLJ 98.2 1.5E-06 5E-11 53.6 4.6 61 4-78 40-100 (102)
384 1nct_A Titin; cell adhesion, g 98.2 1.2E-06 4.1E-11 54.7 4.2 77 76-161 13-89 (106)
385 1mq8_A ICAM-1, intercellular a 98.2 5.7E-06 2E-10 61.1 8.4 79 42-123 51-133 (291)
386 1xed_A Polymeric-immunoglobuli 98.2 9.7E-06 3.3E-10 51.6 8.4 73 4-76 33-111 (117)
387 2dlt_A Myosin binding protein 98.2 1.6E-06 5.6E-11 53.9 4.6 59 5-75 38-96 (106)
388 2cr6_A KIAA1556 protein, obscu 98.2 2.2E-06 7.6E-11 54.1 5.3 65 5-82 44-108 (115)
389 2yc1_A Single chain antibody f 98.2 5.7E-06 2E-10 52.4 7.2 37 27-63 65-101 (117)
390 2edk_A Myosin-binding protein 98.2 1.8E-06 6E-11 53.2 4.6 76 77-161 8-86 (101)
391 2k1m_A Myosin-binding protein 98.2 4.3E-06 1.5E-10 50.9 6.3 58 4-75 37-94 (95)
392 1tvd_A T cell receptor, ES204 98.2 4.9E-06 1.7E-10 52.6 6.8 60 3-62 30-97 (116)
393 1kxt_B Immunoglobulin VHH frag 98.2 6.4E-06 2.2E-10 53.2 7.4 61 3-63 31-100 (127)
394 1h5b_A Murine T cell receptor 98.2 4.5E-06 1.5E-10 52.6 6.6 59 5-63 31-93 (113)
395 2coq_A NEW antigen receptor va 98.2 4.2E-06 1.4E-10 52.4 6.4 56 4-62 32-87 (108)
396 2e6q_A Obscurin-like protein 1 98.2 6.1E-06 2.1E-10 52.3 7.1 71 3-79 35-108 (112)
397 3mj6_A Junctional adhesion mol 98.2 1.9E-06 6.3E-11 62.0 5.3 57 41-97 201-259 (268)
398 1mfa_H IGG1-lambda Se155-4 FAB 98.2 7.5E-06 2.5E-10 52.2 7.5 37 27-63 65-101 (120)
399 2r15_A Myomesin-1; sarcomeric 98.2 1E-05 3.4E-10 55.9 8.8 64 4-77 147-211 (212)
400 1yc7_A Anti-VSG immunoglobulin 98.2 9E-06 3.1E-10 52.3 7.9 61 3-63 31-100 (124)
401 2e6p_A Obscurin-like protein 1 98.2 4.3E-06 1.5E-10 51.7 6.1 75 77-161 7-84 (104)
402 3b9v_A Heavy chain variable do 98.2 6.1E-06 2.1E-10 52.6 7.0 37 27-63 65-101 (120)
403 1u9k_A Triggering receptor exp 98.2 3.6E-06 1.2E-10 53.2 5.8 37 27-63 62-98 (114)
404 2d7t_H Anti polyhydroxybutyrat 98.2 3.8E-06 1.3E-10 55.2 6.1 50 27-76 65-116 (139)
405 2e7b_A Obscurin; IG-like domai 98.2 4.5E-06 1.6E-10 51.4 6.2 74 77-160 8-81 (103)
406 2edk_A Myosin-binding protein 98.2 7.9E-07 2.7E-11 54.9 2.6 65 4-78 37-101 (101)
407 2oi9_C V beta, T cell receptor 98.2 8.9E-06 3E-10 52.1 7.7 60 3-63 29-96 (121)
408 2p45_B Antibody CAB-RN05; seMe 98.2 6.1E-06 2.1E-10 52.8 6.9 36 27-62 67-102 (123)
409 2wzp_D Camelid VHH5; baseplate 98.2 6.3E-06 2.1E-10 52.8 6.9 61 3-63 31-101 (123)
410 3cx2_A Myosin-binding protein 98.2 2.3E-05 7.8E-10 48.8 9.4 41 77-117 4-45 (108)
411 2edf_A Obscurin; beta-sandwich 98.2 3.8E-06 1.3E-10 51.8 5.6 45 77-124 8-52 (103)
412 1sq2_N Novel antigen receptor; 98.2 6.5E-06 2.2E-10 52.0 6.7 57 3-62 31-87 (113)
413 2e6q_A Obscurin-like protein 1 98.2 6.2E-06 2.1E-10 52.3 6.5 43 78-124 9-51 (112)
414 2qhl_A Novel immune-type recep 98.2 1E-05 3.5E-10 50.8 7.5 35 27-63 64-98 (111)
415 3moq_A NEW antigen receptor va 98.2 5.3E-06 1.8E-10 53.7 6.3 58 3-63 31-88 (126)
416 2edh_A Obscurin; structural ge 98.2 3.4E-06 1.2E-10 53.0 5.3 83 68-161 9-92 (113)
417 1nko_A Sialic acid binding IG- 98.2 3.5E-06 1.2E-10 54.6 5.5 61 3-63 42-110 (132)
418 2ckn_A Basic fibroblast growth 98.2 4E-06 1.4E-10 51.0 5.5 71 77-161 9-79 (95)
419 3jz7_A MCAR, CAR, coxsackievir 98.2 1.4E-06 4.7E-11 60.2 3.7 36 42-77 177-213 (214)
420 2ywz_A NEW antigen receptor va 98.2 5.8E-06 2E-10 52.0 6.3 57 3-62 31-87 (111)
421 2h32_A Immunoglobulin IOTA cha 98.1 2.5E-06 8.4E-11 55.1 4.6 37 27-63 65-101 (126)
422 2k1m_A Myosin-binding protein 98.1 8.6E-06 3E-10 49.5 6.9 74 78-161 9-82 (95)
423 2edo_A CD48 antigen; beta-sand 98.1 3.9E-06 1.3E-10 53.7 5.5 71 3-77 34-111 (121)
424 1fo0_A Protein (BM3.3 T cell r 98.1 6.8E-06 2.3E-10 52.0 6.6 60 3-62 30-95 (116)
425 1sjv_A R9; camelids antibody, 98.1 5.7E-06 2E-10 52.2 6.1 36 27-62 64-99 (114)
426 3qr2_A Basigin; CD147, EMMPRIN 98.1 7.4E-06 2.5E-10 53.3 6.7 44 75-120 19-62 (137)
427 1j05_H T84.66 antibody, anti-C 98.1 9.3E-06 3.2E-10 51.8 7.1 37 27-63 65-101 (121)
428 1a2y_B IGG1-kappa D1.3 FV (hea 98.1 5.4E-06 1.9E-10 52.5 5.9 37 27-63 64-100 (116)
429 2x1q_A Gelsolin nanobody; cont 98.1 7.3E-06 2.5E-10 52.9 6.5 37 27-63 65-101 (127)
430 1n4x_H Immunoglobulin heavy ch 98.1 7.6E-06 2.6E-10 52.1 6.5 37 27-63 65-101 (120)
431 2x1w_L Vascular endothelial gr 98.1 1.4E-05 4.8E-10 55.7 8.3 38 42-79 172-210 (213)
432 2yd6_A PTPRD protein; hydrolas 98.1 1.2E-05 4.3E-10 55.8 8.0 47 75-123 4-50 (212)
433 2dav_A SLOW MYBP-C, myosin-bin 98.1 9E-06 3.1E-10 52.6 6.7 40 78-117 8-48 (126)
434 1pew_A JTO2, A lambda-6 type i 98.1 8.8E-06 3E-10 50.9 6.5 60 4-63 32-94 (109)
435 2dku_A KIAA1556 protein; beta- 98.1 8E-06 2.7E-10 50.3 6.2 74 77-160 8-81 (103)
436 2atp_B T-cell surface glycopro 98.1 1.4E-05 4.7E-10 50.5 7.4 37 27-63 65-101 (115)
437 2dlt_A Myosin binding protein 98.1 4.8E-06 1.7E-10 51.7 5.1 75 77-161 8-82 (106)
438 2yd1_A Tyrosine-protein phosph 98.1 2.2E-05 7.6E-10 54.4 9.1 45 76-122 5-49 (212)
439 3m45_A Cell adhesion molecule 98.1 2E-05 6.8E-10 48.6 8.0 42 75-118 4-45 (108)
440 1xiw_D Immunoglobulin heavy ch 98.1 9.2E-06 3.2E-10 51.9 6.5 36 27-62 65-100 (122)
441 2q20_A VK1 O18/O8 germline lig 98.1 1.4E-05 4.8E-10 50.0 7.2 58 4-63 33-95 (109)
442 1zvh_A Immunoglobulin heavy ch 98.1 9.6E-06 3.3E-10 52.9 6.6 37 27-63 65-101 (134)
443 1rjc_A 1D2L19, camelid heavy c 98.1 1.3E-05 4.5E-10 52.5 7.2 37 27-63 65-101 (137)
444 2v5t_A NCAM2, N-CAM 2, neural 98.1 1.3E-05 4.4E-10 54.2 7.5 59 4-75 128-187 (189)
445 3k74_B Nanobody; immunoglobuli 98.1 1.2E-05 4.2E-10 50.9 6.9 36 27-62 63-98 (115)
446 1olz_A Semaphorin 4D; developm 98.1 2.5E-06 8.6E-11 69.7 4.4 87 4-103 562-655 (663)
447 1zvy_A Immunoglobulin heavy ch 98.1 9.3E-06 3.2E-10 53.2 6.4 61 3-63 31-101 (136)
448 3k1k_C Enhancer; nanobody, ant 98.1 1.6E-05 5.4E-10 51.1 7.4 36 27-62 67-102 (123)
449 1jhl_L IGG1-kappa D11.15 FV (l 98.1 1.2E-05 4.1E-10 50.1 6.7 58 4-63 31-93 (108)
450 2wv3_A Neuroplastin; igcam, me 98.1 2.5E-05 8.7E-10 53.1 8.9 66 4-75 122-189 (190)
451 2yuv_A Myosin-binding protein 98.1 2.2E-05 7.7E-10 48.0 7.8 75 77-161 7-82 (100)
452 2e7b_A Obscurin; IG-like domai 98.1 5.5E-06 1.9E-10 51.0 4.9 60 6-79 39-98 (103)
453 2edn_A Myosin-binding protein 98.1 8.1E-06 2.8E-10 52.2 5.7 86 78-163 13-101 (118)
454 1mqk_H Antibody 7E2 FV fragmen 98.1 8.8E-06 3E-10 52.5 6.0 37 27-63 65-101 (127)
455 2dku_A KIAA1556 protein; beta- 98.1 6.7E-06 2.3E-10 50.6 5.2 62 4-79 37-98 (103)
456 1gxe_A Myosin binding protein 98.1 3.8E-06 1.3E-10 55.3 4.2 32 84-117 25-56 (139)
457 2ens_A Advanced glycosylation 98.1 2.5E-06 8.5E-11 52.0 3.1 44 78-123 11-54 (96)
458 2i24_N NEW antigen receptor PB 98.1 1.3E-05 4.5E-10 51.3 6.6 57 3-62 31-87 (121)
459 2c5d_C AXL oncogene, tyrosine- 98.1 2.5E-05 8.5E-10 53.3 8.5 45 77-123 2-47 (195)
460 1wwb_X Protein (brain derived 98.1 2.4E-05 8.3E-10 48.4 7.7 33 90-124 14-46 (103)
461 1jtp_A Single-domain antibody; 98.1 2.1E-05 7.3E-10 52.2 7.8 36 27-62 65-100 (148)
462 1j05_L T84.66 antibody, anti-C 98.1 9E-06 3.1E-10 51.0 5.7 59 3-63 34-97 (111)
463 2j8h_A Titin, connectin; cardi 98.0 3.5E-05 1.2E-09 52.5 9.1 46 76-123 3-48 (197)
464 1smo_A Triggering receptor exp 98.0 2.4E-05 8.1E-10 50.0 7.6 51 27-77 62-116 (119)
465 1wwc_A Protein (NT-3 growth fa 98.0 2.2E-05 7.4E-10 49.6 7.4 49 71-124 2-50 (118)
466 2z35_A T-cell receptor alpha-c 98.0 1.6E-05 5.6E-10 49.9 6.8 59 3-61 29-92 (112)
467 1eeq_A Kappa-4 immunoglobulin 98.0 1E-05 3.6E-10 51.0 5.9 59 3-63 36-99 (114)
468 3tpk_A Immunoglobulin heavy ch 98.0 2E-05 6.7E-10 51.6 7.3 37 27-63 69-105 (136)
469 3bdb_A Novel immune-type recep 98.0 2.1E-05 7.3E-10 51.4 7.5 48 27-76 64-113 (137)
470 3zyj_A Leucine-rich repeat-con 98.0 1.4E-05 4.9E-10 62.0 7.7 65 4-78 370-435 (440)
471 2frg_P TREM-like transcript-1; 98.0 3.8E-05 1.3E-09 47.9 8.2 58 4-63 28-90 (106)
472 1f97_A Junction adhesion molec 98.0 1E-05 3.4E-10 55.8 6.1 68 4-75 135-206 (212)
473 1i3u_A Antibody VHH LAMA domai 98.0 1.3E-05 4.5E-10 51.6 6.2 37 27-63 70-106 (127)
474 4ffy_L DENV1-E111 single chain 98.0 1.3E-05 4.5E-10 51.5 6.2 72 3-76 34-112 (126)
475 1dlf_L Anti-dansyl immunoglobu 98.0 1.4E-05 4.8E-10 50.3 6.2 59 3-63 35-98 (113)
476 1pd6_A Cardiac MYBP-C;, myosin 98.0 1.2E-05 4.2E-10 49.9 5.8 49 4-62 45-93 (104)
477 1oaq_L Light chain; antibody, 98.0 8.9E-06 3E-10 51.8 5.3 59 3-63 32-95 (120)
478 3mtr_A N-CAM-1, NCAM-1, neural 98.0 2.8E-05 9.5E-10 54.1 8.2 45 77-124 19-63 (215)
479 3r4d_A CEA-related cell adhesi 98.0 8E-06 2.7E-10 56.3 5.4 63 4-79 139-203 (208)
480 1rhf_A Tyrosine-protein kinase 98.0 3.1E-05 1.1E-09 52.2 8.1 77 78-162 3-80 (182)
481 1i8k_A Epidermal growth factor 98.0 1.1E-05 3.8E-10 50.2 5.4 58 4-63 31-93 (107)
482 3cx5_J Heavy chain (VH) of FV- 98.0 1.7E-05 5.8E-10 51.1 6.4 36 27-62 65-100 (127)
483 2v5y_A Receptor-type tyrosine- 98.0 9.2E-05 3.1E-09 61.0 12.1 45 76-123 164-211 (731)
484 3s35_X Vascular endothelial gr 98.0 1.9E-05 6.6E-10 50.0 6.5 36 85-120 16-51 (122)
485 2vyr_E Human single domain ant 98.0 1.9E-05 6.4E-10 52.8 6.5 37 27-63 65-101 (153)
486 2cry_A KIN of IRRE-like protei 98.0 1.9E-06 6.5E-11 55.0 1.5 66 5-77 45-114 (122)
487 1mqk_L Antibody 7E2 FV fragmen 98.0 2.4E-05 8.3E-10 49.9 6.8 70 4-75 31-108 (120)
488 3nn8_A Engineered SCFV, heavy 98.0 4.3E-05 1.5E-09 48.8 8.0 36 27-62 66-101 (122)
489 3k81_A Single strand antibody 98.0 3.3E-05 1.1E-09 50.0 7.4 60 3-62 31-99 (127)
490 2e27_L Anti-ciguatoxin antibod 98.0 1.9E-05 6.5E-10 50.3 6.2 58 4-63 33-95 (119)
491 3lcy_A Titin; A-BAND, IG tande 98.0 5.9E-05 2E-09 51.2 9.0 47 76-124 6-52 (197)
492 2a38_A Titin; Z1Z2, structural 98.0 2.7E-05 9.3E-10 52.9 7.2 46 77-124 5-50 (194)
493 1f2q_A High affinity immunoglo 98.0 1.1E-05 3.9E-10 54.3 5.2 38 42-79 135-174 (176)
494 2yc1_B Single chain antibody f 98.0 1.6E-05 5.4E-10 52.7 5.7 73 4-78 46-125 (146)
495 3bfo_A Mucosa-associated lymph 98.0 1.5E-05 5.1E-10 48.0 5.2 22 42-63 51-72 (91)
496 2v9r_A Roundabout homolog 1; p 97.9 7.4E-06 2.5E-10 56.5 4.2 45 77-123 9-53 (212)
497 3k3q_A Llama AA1 VHH domain; l 97.9 6.8E-05 2.3E-09 50.0 8.8 60 3-62 45-114 (151)
498 3s97_C Contactin-1; carbonic a 97.9 3.2E-05 1.1E-09 52.7 7.4 34 42-75 166-200 (201)
499 2cpc_A KIAA0657 protein; immun 97.9 4.9E-05 1.7E-09 47.4 7.7 78 74-161 7-87 (113)
500 3eak_A NBBCII10-FGLA; antibody 97.9 2.5E-05 8.5E-10 51.2 6.5 61 3-63 34-104 (137)
No 1
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.71 E-value=1.1e-16 Score=112.84 Aligned_cols=114 Identities=18% Similarity=0.283 Sum_probs=79.3
Q ss_pred CcEEEEEEcCceeEE----EEcceee----cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEE
Q psy1826 3 LAQISWVRHRDIHLL----TVSGYTY----TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLS 73 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~----~~~~~~~----~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~ 73 (169)
...|.|+|++..... ....... ....++.+... .+.+.|.|.+++.+|+|.|.|.+.|. +.....+.|.
T Consensus 25 ~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 102 (203)
T 4fa8_A 25 EIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRS--ANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLS 102 (203)
T ss_dssp TSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred CcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEc--CCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEE
Confidence 468999997642111 1111111 11234443222 35678999999999999999999997 6667778888
Q ss_pred EeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 74 VVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 74 v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
|..||.+...+....+.+|+.+.|.|.+.|. |.|.++|++++..+
T Consensus 103 V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~--P~P~v~W~~~~~~~ 147 (203)
T 4fa8_A 103 VVKPLTLSVHSERSQFPDFSVLTVTCTVNAF--PHPHVQWLMPEGVE 147 (203)
T ss_dssp EEEEEEEEEEEEECCSSCSCCEEEEEEEEEE--SCCEEEECCC----
T ss_pred ecCCceeeecceeEEEcCCCEEEEEEEcCCC--CCCEEEEEECCeee
Confidence 8888776666667778899999999999996 45699998866443
No 2
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.66 E-value=1.3e-14 Score=102.37 Aligned_cols=137 Identities=12% Similarity=0.151 Sum_probs=87.6
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEe--------
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVV-------- 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~-------- 75 (169)
.+|.|+|++. .+. .+.|+.+......+...|.|.+++.+|+|.|.|.+.| +.......+.+.
T Consensus 33 p~i~W~kng~-~l~--------~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N-g~a~~~~~~~~~~~~~~~~~ 102 (207)
T 3rbs_A 33 AKVNYIFNEK-EIF--------EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD-GKATNHSTVVLVGDVFKKLQ 102 (207)
T ss_dssp CEEEEEETTE-EEC--------SSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE-TTEEEEEEEEECTHHHHHHH
T ss_pred CEEEEEECCE-ECc--------cCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC-CCeEEEEEEEEEccchhhhc
Confidence 5789999874 221 2245554443323566899999999999999999998 333333333211
Q ss_pred -------------ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEE
Q psy1826 76 -------------EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLL 142 (169)
Q Consensus 76 -------------~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (169)
.+|.+.... ...+.+|+.+.|.|.+.|. .|.|.+.|++|+.++..+.... .......+.
T Consensus 103 ~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~-~P~p~i~W~k~g~~l~~~~~~~---~~~~~~~L~--- 174 (207)
T 3rbs_A 103 KEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANI-KKETHIVWYKDEREISVDEKHD---FKDGICTLL--- 174 (207)
T ss_dssp HHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESC-CTTCEEEEEETTEEECCCCCCC---CSSEEEEEE---
T ss_pred ccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCC-CCCCEEEEEECCEECCCCCceE---cCCCEEEEE---
Confidence 134433322 4678899999999999996 1567999999999987643221 111112222
Q ss_pred EeeEEEEeeeceeeEEEee
Q psy1826 143 SVSIVELTWKLEATYILAG 161 (169)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~ 161 (169)
+.....+|.+.|.+..
T Consensus 175 ---I~~v~~~D~G~Y~C~a 190 (207)
T 3rbs_A 175 ---ITEFSKKDAGIYEVIL 190 (207)
T ss_dssp ---ETTCCGGGCEEEEEEE
T ss_pred ---ECCCCcccCEEEEEEE
Confidence 4456667777777654
No 3
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.62 E-value=4e-15 Score=104.60 Aligned_cols=95 Identities=20% Similarity=0.190 Sum_probs=71.1
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C---CceEEEEEEEe----ccceeeecCCcEEEcCCCcEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P---PIGISMYLSVV----EPITQIIGGPDMYINKGSTMNLT 98 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~---~~~~~~~l~v~----~~p~~~~~~~~~~v~~g~~~~l~ 98 (169)
..|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. + .....+.|.|. .+|.+...+....+.+|+.+.|.
T Consensus 58 ~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~ 135 (213)
T 3mj8_L 58 PDHFSGSNS--GNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLV 135 (213)
T ss_dssp CTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEE
T ss_pred cCcEEEEec--CCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEE
Confidence 457775432 35668999999999999999999987 4 23445677787 55665555555555589999999
Q ss_pred EEeecCCCCCCeeEEEECCEEeecc
Q psy1826 99 CVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 99 C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
|.+.+.+.|++.+.|+++|.++..+
T Consensus 136 C~~~g~~p~~~~v~W~k~g~~l~~~ 160 (213)
T 3mj8_L 136 CMINGFYPADVAVTWEADGTPITQG 160 (213)
T ss_dssp EEEEEEBSSCCEEEEEETTEEECTT
T ss_pred EEeeceeCCCeEEEEEcCCcccCCC
Confidence 9999864344599999999988653
No 4
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.62 E-value=1.2e-14 Score=100.23 Aligned_cols=141 Identities=23% Similarity=0.321 Sum_probs=95.7
Q ss_pred CcEEEEEE-cCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEeccce
Q psy1826 3 LAQISWVR-HRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSVVEPIT 79 (169)
Q Consensus 3 ~~~V~W~k-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v~~~p~ 79 (169)
...|.|+| ++. .+. . ...|+...... .....|.|.+++.+|+|.|.|.+.+.. .....+.|.|..+|.
T Consensus 32 ~~~v~W~~~~g~-~~~-~------~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~ 102 (191)
T 1epf_A 32 DKDISWFSPNGE-KLS-P------NQQRISVVWND-DDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLM 102 (191)
T ss_dssp CCEEEEECTTSC-EEC-C------BSSSEEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEECCSE
T ss_pred CceEEEEeCCCc-ccc-C------CCCeEEEEECC-CCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEeecCce
Confidence 36799998 543 221 1 23455543321 245589999999999999999999872 345566777888888
Q ss_pred eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEE
Q psy1826 80 QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYIL 159 (169)
Q Consensus 80 ~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (169)
+...+....+.+|+.+.|.|.+.+. |.|.+.|++++..+......+....... .+. +.....+|.+.|.+
T Consensus 103 ~~~~~~~~~~~~g~~~~l~C~~~g~--p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~L~------i~~~~~~d~G~Y~C 172 (191)
T 1epf_A 103 FKNAPTPQEFKEGEDAVIVCDVVSS--LPPTIIWKHKGRDVILKKDVRFIVLSNN--YLQ------IRGIKKTDEGTYRC 172 (191)
T ss_dssp EEECCSSEECCTTSCEEECCEEECS--SCCEEEEEETTEEGGGGCCTTEEECTTS--CEE------ETTCCGGGCEEEEE
T ss_pred EecCCCcEeecCCCeEEEEEEECCC--CCCEEEEEECCEEeeccCCceEEEecCC--eEE------ECCCChhhCEEEEE
Confidence 7777778889999999999999986 4568999999999875543332221111 122 33445566666666
Q ss_pred eee
Q psy1826 160 AGT 162 (169)
Q Consensus 160 ~~~ 162 (169)
...
T Consensus 173 ~a~ 175 (191)
T 1epf_A 173 EGR 175 (191)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 5
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.62 E-value=3.6e-14 Score=99.34 Aligned_cols=110 Identities=22% Similarity=0.283 Sum_probs=76.5
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec-----
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE----- 76 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~----- 76 (169)
...|.|+|++. .+. ...|+...... +...|.|.+++.+|+|.|.|.+.+. +.....+.+.+..
T Consensus 32 ~~~i~W~~~g~-~i~--------~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~ 100 (212)
T 2r15_A 32 DLKVNWSHNGS-AIR--------YSDRVKTGVTG--EQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAY 100 (212)
T ss_dssp SCEEEEEETTE-ECC--------CCSSEEEEEET--TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHH
T ss_pred CceEEEEECCE-Ecc--------CCCeEEEEEeC--CEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchh
Confidence 46799999873 221 22455533322 3447999999999999999999996 4444444444331
Q ss_pred ---------------cceeee-cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccc
Q psy1826 77 ---------------PITQII-GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLM 125 (169)
Q Consensus 77 ---------------~p~~~~-~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~ 125 (169)
.|.+.. .+....+.+|+.+.|.|.+.+. |.|.+.|++++.++..+..
T Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~--p~p~v~W~~~~~~~~~~~~ 163 (212)
T 2r15_A 101 AEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGD--PPPEVSWLKNEKALAQTDH 163 (212)
T ss_dssp HHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECS--SCCEEEEEETTEEECCCSS
T ss_pred hhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCC--CCceEEEEECCeECccCCC
Confidence 233333 3445788999999999999996 4569999999999876543
No 6
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.62 E-value=1.7e-14 Score=99.50 Aligned_cols=137 Identities=22% Similarity=0.333 Sum_probs=90.5
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCc-eEEEEEEEeccceeee
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPI-GISMYLSVVEPITQII 82 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~-~~~~~l~v~~~p~~~~ 82 (169)
.|.|+|.++.... ...|+...... ....|.|.+++.+|+|.|.|.+.+. +.. ...+.|.|..+|.+..
T Consensus 32 ~v~W~~~~~~~~~--------~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~ 101 (189)
T 2v44_A 32 SIDWYNPQGEKII--------STQRVVVQKEG--VRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFRE 101 (189)
T ss_dssp EEEEECTTSCBCC--------CCSSEEEEEET--TEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEES
T ss_pred eEEEEeCCCCccC--------CCceEEEECCC--CeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEecCCceee
Confidence 6899984322221 23455533322 3458999999999999999999987 443 5667888888887766
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEee
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAG 161 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
.+....+.+|+.+.|.|.+.+. |.|.+.|++++.++......+...... +.+. +.....+|.+.|.+..
T Consensus 102 ~~~~~~~~~g~~~~l~C~~~g~--p~p~v~W~~~~~~~~~~~~~~~~~~~~--~~L~------i~~v~~~d~G~Y~C~a 170 (189)
T 2v44_A 102 VVSPQEFKQGEDAEVVCRVSSS--PAPAVSWLYHNEEVTTISDNRFAMLAN--NNLQ------ILNINKSDEGIYRCEG 170 (189)
T ss_dssp CCCSEEEETTSCEEECCEEECS--SCCEEEEEEEC--CEECCCTTEEECTT--SCEE------ETTCCGGGCEEEEEEE
T ss_pred cCCcEEEeCCCCEEEEEEECcC--CCCcEEEEECCcEEeccCCCCEEEecC--CcEE------EEEcCcccCeEEEEEE
Confidence 6677889999999999999986 456999999998876432222221111 1122 3344556666666654
No 7
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.61 E-value=5.9e-14 Score=98.68 Aligned_cols=110 Identities=23% Similarity=0.437 Sum_probs=82.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCC-CCCeEEEEEEEcC-CC-ceEEEEEEEecc---
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQK-RDSGIYECQVSTT-PP-IGISMYLSVVEP--- 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~--- 77 (169)
..|.|+|++. .+. ....|+...... .+...|.|.++.. +|+|.|.|.+.+. +. ....+.|.|..+
T Consensus 36 ~~v~W~~~~~--~~~------~~~~~~~~~~~~-~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~ 106 (212)
T 2yd1_A 36 PSIVWRKNGK--KVS------GTQSRYTVLEQP-GGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKT 106 (212)
T ss_dssp CEEEEEETTE--ECC------TTSTTEEEEEET-TTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCS
T ss_pred CeEEEEECCE--ECC------CCcceeEEEEcC-CCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCC
Confidence 4789999863 221 123566643322 2446899999999 9999999999988 55 566778888764
Q ss_pred ----ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 78 ----ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 78 ----p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
|.+...+....+.+|+.+.|.|.+.+. |.|.+.|++++.++....
T Consensus 107 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~~~~~~~~ 155 (212)
T 2yd1_A 107 PAGFPVITQGPGTRVIEVGHTVLMTCKAIGN--PTPNIYWIKNQTKVDMSN 155 (212)
T ss_dssp CTTCCEEEECCCCEEEETTCCEEECCEEECS--SCCEEEEEETTEECCTTS
T ss_pred CCCCCeeEeCCCceEeecCCeEEEEEEeccC--CCCeEEEEECCeEcccCC
Confidence 555555667888899999999999996 456999999999887643
No 8
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.61 E-value=9e-14 Score=97.81 Aligned_cols=108 Identities=25% Similarity=0.421 Sum_probs=75.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCC-CCCCeEEEEEEEcC-CCceEEEEEEEecc----
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQ-KRDSGIYECQVSTT-PPIGISMYLSVVEP---- 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~---- 77 (169)
..|.|+|++. .+.. .+.............|.|.++. .+|+|.|.|.+.+. +.....+.|.|..+
T Consensus 36 ~~v~W~k~~~--~~~~--------~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~ 105 (212)
T 2yd6_A 36 PKIVWNKKGK--KVSN--------QRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIP 105 (212)
T ss_dssp CEEEEEETTE--ECCC--------TTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGCC
T ss_pred CEEEEEECCc--CCCC--------CceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCccC
Confidence 4789999873 2211 2332221111133479999994 99999999999987 55666777888654
Q ss_pred ---ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 78 ---ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 78 ---p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
|.+...+....+.+|+.+.|.|.+.|. |.|.+.|++++.++...
T Consensus 106 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~--p~p~v~W~~~g~~l~~~ 152 (212)
T 2yd6_A 106 RGFPTIDMGPQLKVVERTRTATMLCAASGN--PDPEITWFKDFLPVDTS 152 (212)
T ss_dssp TTCCEEEECCCCEEEETTSCEEEEEEEECS--SCCEEEEEETTEEC---
T ss_pred CCcceeecCCcceeEecCCCEEEEEEecCC--CCCeEEEEECCccccCc
Confidence 445555566788899999999999986 45699999999988754
No 9
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.61 E-value=1.7e-14 Score=100.00 Aligned_cols=110 Identities=14% Similarity=0.249 Sum_probs=79.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++.. +. . .+.++...... .+...|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.+..
T Consensus 34 ~~v~W~~~~~~-~~-~------~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~ 104 (197)
T 2j8h_A 34 PIVKWYRQGKE-II-A------DGLKYRIQEFK-GGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHL 104 (197)
T ss_dssp CEEEEEETTEE-CC-C------CSSSEEEEEET-TTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEEECC
T ss_pred CEEEEEECCEE-Cc-c------CCCcEEEEEcC-CCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCcCCC
Confidence 47899998742 11 1 22455533222 34568999999999999999999987 5556677888877665432
Q ss_pred cC-----CcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 83 GG-----PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 83 ~~-----~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.. ....+.+|+.+.|.|.+.+. |.|.+.|++++.++....
T Consensus 105 ~~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~~~~~~~~ 149 (197)
T 2j8h_A 105 PKTLEGMGAVHALRGEVVSIKIPFSGK--PDPVITWQKGQDLIDNNG 149 (197)
T ss_dssp SSCBTTBEEEEEETTCCCEEEEEEEEE--SCCEEEEEESSCEECSSS
T ss_pred CccccccCeEEEeCCCEEEEEEEEEec--CCCcEEEEECCEEeecCC
Confidence 22 34678899999999999986 456999999999887443
No 10
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.60 E-value=9.8e-14 Score=95.85 Aligned_cols=80 Identities=19% Similarity=0.261 Sum_probs=68.5
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE--CCE
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH--NTE 118 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~--~~~ 118 (169)
..|.|.+++.+|+|.|.|.+.+.+.....+.|.|..+|.+...+....+.+|+.+.|.|.+.|. |.|.+.|++ ++.
T Consensus 56 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~~g~ 133 (190)
T 2wv3_A 56 MEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGY--PHPEWMWRKKENGV 133 (190)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECS--SCCEEEEEEEETTE
T ss_pred EEEEEecCCcccCEEEEEEEEeCCcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCcc--CCCceEEEEcCCCc
Confidence 4899999999999999999988745556778888888887777777889999999999999996 456999999 888
Q ss_pred Eeec
Q psy1826 119 VSQL 122 (169)
Q Consensus 119 ~~~~ 122 (169)
++..
T Consensus 134 ~~~~ 137 (190)
T 2wv3_A 134 FEEI 137 (190)
T ss_dssp EEEC
T ss_pred eeee
Confidence 7764
No 11
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.60 E-value=3.1e-14 Score=98.23 Aligned_cols=107 Identities=24% Similarity=0.360 Sum_probs=82.6
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEeccceee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEPITQI 81 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~p~~~ 81 (169)
..|.|+|++. .+. ..+.|+....... .|.|.+++.+|+|.|.|.+.+. +. ......+.|..+|.+.
T Consensus 37 ~~i~W~~~~~--~~~------~~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~ 104 (192)
T 2iep_A 37 PEISWTRNKI--LIK------LFDTRYSIRENGQ----LLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKIT 104 (192)
T ss_dssp CEEEEEETTE--ECC------TTCTTEEEEGGGT----EEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEE
T ss_pred CeEEEEECCE--Ecc------ccCccEEEcCCcc----EEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccc
Confidence 4789999763 211 1235666444333 7999999999999999999987 44 4556788888888877
Q ss_pred ecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 82 IGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 82 ~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
..+....+.+|+.+.|.|.+.+.| .+.+.|++++..+....
T Consensus 105 ~~~~~~~~~~g~~~~l~C~~~g~p--~~~v~W~~~~~~~~~~~ 145 (192)
T 2iep_A 105 RPPINVKIIEGLKAVLPCTTMGNP--KPSVSWIKGDSALRENS 145 (192)
T ss_dssp ECCCCEEEETTSCEEECCEEEEES--CCEEEEEETTEECCCCS
T ss_pred cCCcceEEeCCCcEEEEEEEeccC--CceEEEEeCCEEccCCC
Confidence 767778899999999999999864 56999999999877543
No 12
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.59 E-value=2.5e-14 Score=109.33 Aligned_cols=81 Identities=20% Similarity=0.242 Sum_probs=71.3
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
.|.|.+++.+|+|.|.|.|.|. +.......|.|..+|.+...+....+.+|+.+.|.|.+.|. |.|.+.|+++|.++
T Consensus 259 ~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~--P~p~i~W~k~g~~l 336 (384)
T 3kld_A 259 ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGR--PKPTYRWLKNGDPL 336 (384)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEE--SCCEEEEEETTEEC
T ss_pred EEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCcc--CCCeEEEEECCEEC
Confidence 8999999999999999999998 66667788889888887777778899999999999999996 45699999999988
Q ss_pred eccc
Q psy1826 121 QLNL 124 (169)
Q Consensus 121 ~~~~ 124 (169)
....
T Consensus 337 ~~~~ 340 (384)
T 3kld_A 337 LTRD 340 (384)
T ss_dssp CCBT
T ss_pred CCCc
Confidence 6543
No 13
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.59 E-value=1.2e-13 Score=95.36 Aligned_cols=110 Identities=19% Similarity=0.270 Sum_probs=79.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe---ccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV---EPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~---~~p~ 79 (169)
..|.|+|++. .+... ...++..... .+...|.|.+++..|+|.|.|.+.+. +.......+.|. .+|.
T Consensus 35 ~~v~W~~~~~--~~~~~-----~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p~ 105 (194)
T 2a38_A 35 PEVSWFRDGQ--VISTS-----TLPGVQISFS--DGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPN 105 (194)
T ss_dssp CEEEEEESSS--BCCTT-----TSTTCEEEEE--TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEE
T ss_pred CEEEEEECCE--Ecccc-----cCCceEEEeC--CCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCCCCCE
Confidence 4689999764 11110 1123332222 23458999999999999999999887 555556677776 4556
Q ss_pred eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 80 QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 80 ~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+...+....+.+|+.+.|.|.+.+. |.|.+.|++++.++..+.
T Consensus 106 ~~~~~~~~~~~~g~~~~l~C~~~g~--p~~~v~W~~~~~~~~~~~ 148 (194)
T 2a38_A 106 FVQRLQSMTVRQGSQVRLQVRVTGI--PTPVVKFYRDGAEIQSSL 148 (194)
T ss_dssp EEECCCCEEECTTEEEEEEEEEEEE--SCCEEEEEETTEECCCSS
T ss_pred EEeCCccEEEcCCCEEEEEEEEEEe--cCCeEEEEECCEECCCCC
Confidence 5666667889999999999999986 456899999999887543
No 14
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.59 E-value=1.3e-13 Score=97.27 Aligned_cols=117 Identities=18% Similarity=0.216 Sum_probs=77.2
Q ss_pred CcEEEEEEcCceeEEEEccee-e------cCCCCeEEEecC-CCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy1826 3 LAQISWVRHRDIHLLTVSGYT-Y------TSDQRFSCIHKP-QNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSV 74 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~-~------~~~~r~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v 74 (169)
...|.|+|++. .+....... . ....|+.+.... ..+...|.|.+++.+|+|.|.|.+.+.+.....+.|.|
T Consensus 35 ~~~v~W~~~~~-~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V 113 (222)
T 3sbw_C 35 ALIVYWEMEDK-NIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITVKV 113 (222)
T ss_dssp TCEEEEEETTE-EEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGGCEEEEEEEESSSEEEEEEEEEE
T ss_pred cEEEEEEECCc-EEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccccCeEEEEEEEeCCCceeEEEEEE
Confidence 45899999863 222221111 0 012466543221 23456899999999999999999998644555677888
Q ss_pred eccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC-CEEeec
Q psy1826 75 VEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN-TEVSQL 122 (169)
Q Consensus 75 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~-~~~~~~ 122 (169)
..++..........+.+|+.+.|.|.+.|. |.|.+.|+++ +..+..
T Consensus 114 ~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~--P~p~i~W~~~~g~~~~~ 160 (222)
T 3sbw_C 114 NAPYNKINQRILVVDPVTSEHELTCQAEGY--PKAEVIWTSSDHQVLSG 160 (222)
T ss_dssp EBCCCCCEEEEEEEETTTTEEEEEEEEEEB--SCCEEEEEETTCCEECC
T ss_pred ECCCCCCCceeeeeecCCCcEEEEEEecCC--CCCeEEEEECCCceecC
Confidence 766543222222367889999999999995 5679999998 665543
No 15
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.59 E-value=7.3e-14 Score=106.32 Aligned_cols=115 Identities=26% Similarity=0.405 Sum_probs=85.3
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|+..+..+... ....+.|+..... .....|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|.+..
T Consensus 30 p~v~W~~~~~g~~~~~~--~~~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~ 105 (389)
T 2jll_A 30 PEITWKRAVDGFTFTEG--DKSLDGRIEVKGQ--HGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFIS 105 (389)
T ss_dssp CEEEEEETTTTEEECC----CCSSSSEEEEEC--SSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECC
T ss_pred CeEEEEeCCCCceeccC--cCCCCCeEEEecc--CCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEec
Confidence 46899998321232211 1112456664332 23458999999999999999999998 7777788999998888665
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+....+.+|+.+.|.|.+.+.| ++.+.|++++.++....
T Consensus 106 ~~~~~~~~~g~~~~l~C~~~g~p--~~~i~W~~~g~~l~~~~ 145 (389)
T 2jll_A 106 NQTIYYSWEGNPINISCDVKSNP--PASIHWRRDKLVLPAKN 145 (389)
T ss_dssp SCCEEEECTTCCEEEEECEEEES--CCEEEEEETTEESSCTT
T ss_pred CcceEEeccCCEEEEEEEEEecC--CCeEEEEECCccCCccc
Confidence 55555789999999999999964 57999999999887654
No 16
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.58 E-value=4.6e-14 Score=113.15 Aligned_cols=139 Identities=15% Similarity=0.173 Sum_probs=96.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
.+|.|+|++. .+ ..+.++.+...+ ....|.|.++..+|+|.|.|.|.|. +.....+.|.|..+|.+..
T Consensus 414 p~v~W~k~g~--~l-------~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~ 482 (570)
T 3b43_A 414 FQVSWHKDKR--EL-------RSGKKYKIMSEN--FLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVK 482 (570)
T ss_dssp CCCEEEETTE--EC-------CSSSSEEEEEET--TEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEE
T ss_pred CEEEEEECCE--EC-------cCCCCEEEEEcC--CEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccc
Confidence 3689999873 21 123455543332 2347999999999999999999998 7777788899999998887
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEee
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAG 161 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
.+.+..+.+|+.+.|.|.+.|. |+|.+.|++++..+.................+. +.....+|.+.|.+..
T Consensus 483 ~~~~~~~~~g~~~~l~c~~~g~--p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~------i~~~~~~d~G~Y~C~a 553 (570)
T 3b43_A 483 KLSDISTVVGEEVQLQATIEGA--EPISVAWFKDKGEIVRESDNIWISYSENIATLQ------FSRAEPANAGKYTCQI 553 (570)
T ss_dssp CCCCBCCBTTCCEEEEEEEESC--SSCCCEEEETTEECCCCTTTEEECCCSSEEEEE------ESSCCTTCCEEEEEEE
T ss_pred cCCCceecCCCeEEEEEEEecC--CCCEEEEEeCCeEeccCCCeEEEEECCCEEEEE------ECcCCHHHCEEEEEEE
Confidence 7778888999999999999995 567999999987654433222111111122222 3344556666666643
No 17
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.58 E-value=1e-13 Score=101.27 Aligned_cols=108 Identities=19% Similarity=0.313 Sum_probs=83.2
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++. ... ...++..... .....|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.+..
T Consensus 129 ~~v~W~~~~~-~~~--------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 197 (284)
T 2rik_A 129 IKVLWYKDET-EIQ--------ESSKFRMSFV--ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRK 197 (284)
T ss_dssp CEEEEEETTE-ECC--------CSSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCS
T ss_pred CEEEEEECCE-ECc--------CCCcEEEEEc--CCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCccee
Confidence 4789999873 121 1123332221 23448999999999999999999998 6677778889998888777
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+....+.+|+.+.|.|.+.+. |+|.+.|++++.++....
T Consensus 198 ~~~~~~~~~g~~v~l~C~~~g~--p~~~v~W~~~~~~~~~~~ 237 (284)
T 2rik_A 198 KPHPVETLKGADVHLECELQGT--PPFQVSWHKDKRELRSGK 237 (284)
T ss_dssp CCCCEEECTTCCEEEEEECBSS--SCCEEEEEETTEEECBTT
T ss_pred CCCcceecCCCeEEEEEEEEec--CCCEEEEEECCEECcCCC
Confidence 6777889999999999999996 457999999999887654
No 18
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.58 E-value=1.2e-13 Score=98.10 Aligned_cols=116 Identities=19% Similarity=0.216 Sum_probs=73.4
Q ss_pred CCcEEEEEEcCceeEEEE--cceee------cCCCCeEEEecC-CCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEE
Q psy1826 2 SLAQISWVRHRDIHLLTV--SGYTY------TSDQRFSCIHKP-QNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYL 72 (169)
Q Consensus 2 ~~~~V~W~k~~~~~~~~~--~~~~~------~~~~r~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l 72 (169)
+++.|.|+|++....... ..... .-..|+...... ..+.+.|.|.+++.+|+|.|.|.+.|. .......+
T Consensus 35 ~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~-~~~~~~~v 113 (226)
T 4f80_A 35 ETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDG-DFYEKALV 113 (226)
T ss_dssp TTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEE
T ss_pred CceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHHCeeEEEEEECC-CcEEEEEE
Confidence 356899999874322211 11100 012355433221 134668999999999999999999986 22233445
Q ss_pred EEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEE
Q psy1826 73 SVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEV 119 (169)
Q Consensus 73 ~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~ 119 (169)
.+..++..........+.+|..+.|.|.+.+. .|+|.++|++++..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~-~P~p~i~W~k~~~~ 159 (226)
T 4f80_A 114 ELKVAALGSDLHVDVKGYKDGGIHLECRSTGW-YPQPQIQWSNNKGE 159 (226)
T ss_dssp EEEEEBCCCCCEEEEEEEETTEEEEEEEEEEE-BSCCEEEEECTTSC
T ss_pred EEeeccceecccceeeeccCCceeeEEEeccC-CCCCEEEEEECCce
Confidence 55544443333445677899999999999885 25679999986533
No 19
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.57 E-value=6.8e-14 Score=112.17 Aligned_cols=108 Identities=19% Similarity=0.313 Sum_probs=84.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++. .+. ...++.+... .....|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|.+..
T Consensus 321 p~v~W~k~~~-~l~--------~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~ 389 (570)
T 3b43_A 321 IKVLWYKDET-EIQ--------ESSKFRMSFV--ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRK 389 (570)
T ss_dssp CEEEEEETTE-ECC--------CSSSEEEEEE--TTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECS
T ss_pred CEEEEeECCE-ECC--------CCCcEEEEEE--CCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeec
Confidence 4789999874 121 1234432221 12347999999999999999999998 7778888999999998777
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+....+.+|+.+.|.|.+.|. |+|.+.|++++.++..+.
T Consensus 390 ~~~~~~~~~G~~v~l~C~~~g~--P~p~v~W~k~g~~l~~~~ 429 (570)
T 3b43_A 390 KPHPVETLKGADVHLECELQGT--PPFQVSWHKDKRELRSGK 429 (570)
T ss_dssp CCCCEEECTTCCEEEEEEEESS--SSCCCEEEETTEECCSSS
T ss_pred CCCceeecCCCEEEEEEEEecC--CCCEEEEEECCEECcCCC
Confidence 7778888999999999999996 457999999999886544
No 20
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.57 E-value=3.4e-14 Score=97.37 Aligned_cols=81 Identities=23% Similarity=0.360 Sum_probs=68.8
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCC-eeEEEECC
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPP-AIYWLHNT 117 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~-~i~W~~~~ 117 (169)
..|.|.+++.+|+|.|.|.+.+. +. ....+.|.|..+|.+...+....+.+|+.+.|.|.+.+. |.| .+.|++++
T Consensus 60 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~~v~W~~~~ 137 (182)
T 1rhf_A 60 GFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGP--PEPVTIVWWRGT 137 (182)
T ss_dssp EEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECS--SSCCEEEEEETT
T ss_pred EEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCC--CCCCEEEEEcCC
Confidence 48999999999999999999987 33 445678889888887777778889999999999999986 456 99999999
Q ss_pred EEeecc
Q psy1826 118 EVSQLN 123 (169)
Q Consensus 118 ~~~~~~ 123 (169)
..+...
T Consensus 138 ~~~~~~ 143 (182)
T 1rhf_A 138 TKIGGP 143 (182)
T ss_dssp EECSCS
T ss_pred eECCCC
Confidence 887543
No 21
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.56 E-value=8.4e-14 Score=99.02 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=66.8
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC----C---ceEEEEEEEec----cceeeecCCcEEEcCCCcE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP----P---IGISMYLSVVE----PITQIIGGPDMYINKGSTM 95 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~----~---~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~ 95 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. . ....+.|.|.. +|.+...++...+.+|+.+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v 144 (223)
T 1dee_B 65 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTV 144 (223)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEE
T ss_pred CCeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcE
Confidence 46888655433457799999999999999999998852 1 12335777763 3333322222235689999
Q ss_pred EEEEEeecCCCCCC-eeEEEE-CCEEeec
Q psy1826 96 NLTCVIKHSPEPPP-AIYWLH-NTEVSQL 122 (169)
Q Consensus 96 ~l~C~~~~~p~p~~-~i~W~~-~~~~~~~ 122 (169)
.|.|.+.+.. |.| .++|++ +|.++..
T Consensus 145 ~L~C~~~g~~-P~p~~v~W~~~~g~~l~~ 172 (223)
T 1dee_B 145 AVGCLAQDFL-PDSITFSWKYKNNSDISS 172 (223)
T ss_dssp EEEEEEEEEB-SSCCEEEEEETTSCBCSC
T ss_pred EEEEEEEEEe-CCCeEEEeEccCCCccce
Confidence 9999999862 445 999999 8887643
No 22
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.56 E-value=2.1e-14 Score=100.80 Aligned_cols=94 Identities=17% Similarity=0.208 Sum_probs=70.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C--CceEEEEEEEe----ccceeeecCCcEEEcCCCcEEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P--PIGISMYLSVV----EPITQIIGGPDMYINKGSTMNLTC 99 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~--~~~~~~~l~v~----~~p~~~~~~~~~~v~~g~~~~l~C 99 (169)
..|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. + .....+.|.|. .+|.+...+....+.+|+.+.|.|
T Consensus 56 ~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C 133 (211)
T 3tv3_L 56 PDRFSGSKS--GNTASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVC 133 (211)
T ss_dssp CTTEEEEEE--TTEEEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEE
T ss_pred cCcEEEEcc--CCEEEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEE
Confidence 357775432 35668999999999999999999987 3 24445677776 455555545444445799999999
Q ss_pred EeecCCCCCCeeEEEECCEEeec
Q psy1826 100 VIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 100 ~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
.+.+.+.|.+.+.|+++|.++..
T Consensus 134 ~~~g~~p~~~~v~W~k~g~~l~~ 156 (211)
T 3tv3_L 134 LISDFYPGAVTVAWKADSSPVKA 156 (211)
T ss_dssp EEEEEBSSCCEEEEEETTEEECT
T ss_pred EeeeecCCCeEEEEEECCeecCC
Confidence 99986445689999999998864
No 23
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.56 E-value=2.5e-13 Score=93.82 Aligned_cols=108 Identities=22% Similarity=0.405 Sum_probs=79.3
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++. .+. ...++..... .....|.|.+++.+|+|.|.|.+.+. +.......+.|..+|....
T Consensus 37 ~~v~W~~~~~-~~~--------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~ 105 (197)
T 3lcy_A 37 PDIKWYRFGK-ELI--------QSRKYKMSSD--GRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHP 105 (197)
T ss_dssp CEEEEEETTE-EEC--------CCSSEEEEES--SSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECT
T ss_pred CEEEEEECCE-ECC--------CCccEEEEeC--CCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCCCCCC
Confidence 3689999873 221 2244543322 23457999999999999999999987 6666677788877765443
Q ss_pred c---CCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 83 G---GPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 83 ~---~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
. +....+.+|+.+.|.|.+.+. |+|.+.|++++.++..+.
T Consensus 106 ~~~~~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~~~~~~~ 148 (197)
T 3lcy_A 106 GYPLKEKYYGAVGSTLRLHVMYIGR--PVPAMTWFHGQKLLQNSE 148 (197)
T ss_dssp TSCCCSEEEEETTSCEEEEEEEEEE--SCCEEEEEETTEECCCCS
T ss_pred CccCCcceeecCCCeEEEEEEEeee--eCCeeEEeECCEECCCCC
Confidence 2 245678899999999999996 456999999999887544
No 24
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.55 E-value=5.9e-14 Score=98.82 Aligned_cols=93 Identities=26% Similarity=0.326 Sum_probs=65.6
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-----CceEEEEEEEe----ccceeeecCCcEEEcCCCcEEE
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-----PIGISMYLSVV----EPITQIIGGPDMYINKGSTMNL 97 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-----~~~~~~~l~v~----~~p~~~~~~~~~~v~~g~~~~l 97 (169)
.|+.+.. ..+.+.|.|.+++.+|+|.|.|.+.+. + .....+.|.|. .+|.+...++...+..|+.+.|
T Consensus 64 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L 141 (218)
T 3s96_B 64 DRFSGSS--SGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATL 141 (218)
T ss_dssp TTEEEEE--ETTEEEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEE
T ss_pred cceEEec--CCceEEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEE
Confidence 5777544 235668999999999999999999886 3 22334577776 3455444444444556789999
Q ss_pred EEEeecCCCCCC-eeEEEECCEEeecc
Q psy1826 98 TCVIKHSPEPPP-AIYWLHNTEVSQLN 123 (169)
Q Consensus 98 ~C~~~~~p~p~~-~i~W~~~~~~~~~~ 123 (169)
.|.+.+.+ |+| .+.|+++|.++...
T Consensus 142 ~C~~~g~~-p~~~~v~W~k~g~~l~~~ 167 (218)
T 3s96_B 142 VCLISNFS-PSGVTVAWKANGTPITQG 167 (218)
T ss_dssp EEEEEEEB-SSCCEEEEEETTEEC---
T ss_pred EEEECccc-CCCeEEEEEECCEECcCc
Confidence 99999853 445 99999999988653
No 25
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.55 E-value=2.4e-14 Score=100.64 Aligned_cols=118 Identities=19% Similarity=0.218 Sum_probs=78.1
Q ss_pred cEEEEEEcCce---eEEEEcce--eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-CceEEEEEEE--
Q psy1826 4 AQISWVRHRDI---HLLTVSGY--TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-PIGISMYLSV-- 74 (169)
Q Consensus 4 ~~V~W~k~~~~---~~~~~~~~--~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-~~~~~~~l~v-- 74 (169)
..|.|+|+... ..+..... ......|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. + .......|.|
T Consensus 31 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3r06_A 31 NYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGS--GRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKR 108 (213)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECC
T ss_pred ceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEecc--CCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEec
Confidence 57899985321 11111110 1112467775432 35668999999999999999999886 2 2333456776
Q ss_pred -eccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 75 -VEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 75 -~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
..+|.+...+....+..|+.+.|.|.+.+.+.|++.+.|+++|.++...
T Consensus 109 ~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 158 (213)
T 3r06_A 109 ADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDG 158 (213)
T ss_dssp CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred cCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCc
Confidence 4455555545555556788899999999875335699999999988653
No 26
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.55 E-value=2.1e-14 Score=101.42 Aligned_cols=93 Identities=24% Similarity=0.301 Sum_probs=65.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-----CceEEEEEEEecc----ceeeecCCcEEEcCCCcEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-----PIGISMYLSVVEP----ITQIIGGPDMYINKGSTMNL 97 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-----~~~~~~~l~v~~~----p~~~~~~~~~~v~~g~~~~l 97 (169)
..|+.+......+...|.|.+++.+|+|.|.|.+.+.. .....+.|.|... |.+...++...+.+|+.+.|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 144 (219)
T 1c1e_H 65 KGRFAFFLETSATTAYLQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTL 144 (219)
T ss_dssp CSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEE
Confidence 46887654322345689999999999999999998863 1223456777652 44443333344678999999
Q ss_pred EEEeecCCCCCC-eeEEEECCEEe
Q psy1826 98 TCVIKHSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 98 ~C~~~~~p~p~~-~i~W~~~~~~~ 120 (169)
.|.+.+. .|.| .+.|++++..+
T Consensus 145 ~C~~~g~-~P~p~~v~W~~~g~~~ 167 (219)
T 1c1e_H 145 GCLVKGY-FPEPVTVTWNSGSLSS 167 (219)
T ss_dssp EEEEEEE-BSSCCEEEEGGGTBCT
T ss_pred EEEcccc-cCCCeEEEEEeCCccc
Confidence 9999983 2456 99999998764
No 27
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.55 E-value=4e-13 Score=92.33 Aligned_cols=108 Identities=19% Similarity=0.276 Sum_probs=73.6
Q ss_pred cEEEEEEcCceeEEEEc--ceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCc--eEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVS--GYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPI--GISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~--~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~--~~~~~l~v~~~p 78 (169)
..|.|+|++. .+.... ...+....|+.+ ..++ .|.|.+++.+|+|.|.|.+.+. +.. ...+.|.|..++
T Consensus 28 ~~i~W~k~~~-~i~~~~~~~~~~~~~~r~~~-~~~g----sL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~ 101 (176)
T 1hng_A 28 DEVRWERGST-LVAEFKRKMKPFLKSGAFEI-LANG----DLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMV 101 (176)
T ss_dssp EEEEEEETTE-EEEEEETTSCCEESSTTEEE-CTTS----CEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCC
T ss_pred ccEEEEeCCc-eeEEEcCCCeecCCCCeEEE-CCCC----cEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCC
Confidence 4799999874 222111 112234578874 4455 7999999999999999999987 554 555677776542
Q ss_pred eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 79 TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 79 ~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
. .+.+. ..+..+.|.|.+.+.| +|.+.|+++|.++..+.
T Consensus 102 ~----~p~i~-~~~~~v~L~C~~~g~p--~p~i~W~~~g~~l~~~~ 140 (176)
T 1hng_A 102 S----KPMIY-WECSNATLTCEVLEGT--DVELKLYQGKEHLRSLR 140 (176)
T ss_dssp C----CCEEE-EETTTTEEEEECSSCS--SCEEEEEETTEEEEEES
T ss_pred C----CCEEE-ecCCcEEEEEEecCCC--CcEEEEEECCEECCCCC
Confidence 1 12222 2345689999999964 57999999999887543
No 28
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.55 E-value=1.6e-13 Score=99.61 Aligned_cols=93 Identities=13% Similarity=0.174 Sum_probs=69.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-----ceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-----IGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCV 100 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-----~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~ 100 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. +. ....+.|.|..+|.+...+..+.+.+|+.+.|.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~ 144 (256)
T 1nqb_A 65 KSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCR 144 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEE
T ss_pred CCeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeE
Confidence 4688865443345678999999999999999999986 31 12345777777766656667788999999999999
Q ss_pred eecCCCCC---CeeEEEE--CCEE
Q psy1826 101 IKHSPEPP---PAIYWLH--NTEV 119 (169)
Q Consensus 101 ~~~~p~p~---~~i~W~~--~~~~ 119 (169)
+.+.|.|. +.+.|++ ++..
T Consensus 145 ~~~~~~~~~~~~~v~W~k~~~g~~ 168 (256)
T 1nqb_A 145 SSQSIVHSNGNTYLEWYLQKPGQS 168 (256)
T ss_dssp ESSCCBCTTSCBCEEEEEECTTSC
T ss_pred ecCcccccccceEEEEEEECCCCC
Confidence 99875221 4999998 5543
No 29
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.54 E-value=1.1e-13 Score=97.19 Aligned_cols=117 Identities=21% Similarity=0.302 Sum_probs=76.6
Q ss_pred CcEEEEEEcCce---eEEEEccee--ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C---CceEEEEEE
Q psy1826 3 LAQISWVRHRDI---HLLTVSGYT--YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P---PIGISMYLS 73 (169)
Q Consensus 3 ~~~V~W~k~~~~---~~~~~~~~~--~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~---~~~~~~~l~ 73 (169)
...|.|+|+... ..+...... ...+.|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. + .......+.
T Consensus 30 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~ 107 (213)
T 3nl4_L 30 SSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGS--GTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVG 107 (213)
T ss_dssp TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEE
T ss_pred CceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecC--CCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEE
Confidence 357899985311 111111100 112468875432 35668999999999999999999886 3 233345566
Q ss_pred Ee---ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 74 VV---EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 74 v~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
|. .+|.+...++...+.+|+.+.|.|.+.+. .|+|.+.|+++|.++..
T Consensus 108 V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~-~P~~~v~W~k~g~~~~~ 158 (213)
T 3nl4_L 108 VKGDPVAPTVLIFPPSADLVATGTVTIVCVANKY-FPDVTVTWEVDGTTQTT 158 (213)
T ss_dssp EECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEE-BSCCEEEEEETTEECCS
T ss_pred EeCCCcCCeEEEeCCchhhccCCcEeEEEEEecc-cCCcEEEEEeCCccCCC
Confidence 63 34444444444456679999999999983 24679999999998764
No 30
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.54 E-value=1.4e-13 Score=105.01 Aligned_cols=81 Identities=23% Similarity=0.352 Sum_probs=71.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
.|.|.++..+|+|.|.|.+.|. +.....+.|.|..+|.+...+....+.+|+.+.|.|.+.|. |.|.+.|+++|.++
T Consensus 276 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~--p~p~v~W~~~g~~~ 353 (404)
T 3p3y_A 276 ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGN--PKPTVQWMVNGEPL 353 (404)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEE--SCCEEEEEETTEEG
T ss_pred eEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEcccc--CCCceEEEECCEec
Confidence 8999999999999999999998 76777888889888887777788899999999999999996 45699999999998
Q ss_pred eccc
Q psy1826 121 QLNL 124 (169)
Q Consensus 121 ~~~~ 124 (169)
....
T Consensus 354 ~~~~ 357 (404)
T 3p3y_A 354 QSAP 357 (404)
T ss_dssp GGSC
T ss_pred CCCC
Confidence 7654
No 31
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.53 E-value=6.5e-13 Score=91.41 Aligned_cols=103 Identities=18% Similarity=0.306 Sum_probs=75.9
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++. .+. ...|+....... .|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.+..
T Consensus 34 ~~v~W~~~~~--~~~-------~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~ 100 (192)
T 2va4_A 34 PAISWFRNGK--LIE-------ENEKYILKGSNT----ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQ 100 (192)
T ss_dssp CEEEEEETTE--ECC-------CSSSEEEETTTT----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEE
T ss_pred CeEEEEECCe--EcC-------CCccEEEeCCee----EEEEecCChhcCcEEEEEEEccccccceEEEEEEEccCcccc
Confidence 4789999873 211 224555333334 8999999999999999999887 5555667788877776554
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC--CEEeec
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN--TEVSQL 122 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~--~~~~~~ 122 (169)
. ....+.+|+.+.|.|.+.+. |+|.+.|+++ +..+..
T Consensus 101 ~-~~~~~~~g~~v~l~C~~~~~--p~~~v~W~~~~~~~~~~~ 139 (192)
T 2va4_A 101 L-KNETTYENGQVTLVCDAEGE--PIPEITWKRAVDGFTFTE 139 (192)
T ss_dssp E-CCEEECTTSEEEEEEEEEEE--SCCEEEEEETTTTEEECT
T ss_pred c-CcceEEeCCeEEEEEEecCC--CCCcEEEEeCCCCceeec
Confidence 3 44567789999999999996 4569999998 665543
No 32
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.53 E-value=8.5e-14 Score=97.27 Aligned_cols=89 Identities=19% Similarity=0.248 Sum_probs=66.0
Q ss_pred CCCeEEEec-CCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEe-ec
Q psy1826 27 DQRFSCIHK-PQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVI-KH 103 (169)
Q Consensus 27 ~~r~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~-~~ 103 (169)
..|+.+... ...+...|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.+........+.+|+.+.|.|.+ .+
T Consensus 69 ~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g 148 (214)
T 3jz7_A 69 KGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEG 148 (214)
T ss_dssp TTTEEESCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBC
T ss_pred ccceEEeccCccCCcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCC
Confidence 456664320 0113448999999999999999999987 55667788888887765444344457899999999999 66
Q ss_pred CCCCCCeeEEEECC
Q psy1826 104 SPEPPPAIYWLHNT 117 (169)
Q Consensus 104 ~p~p~~~i~W~~~~ 117 (169)
. |.|.+.|++++
T Consensus 149 ~--p~~~v~W~~~~ 160 (214)
T 3jz7_A 149 S--LPLQFEWQKLS 160 (214)
T ss_dssp C--SSCEEEEEECS
T ss_pred C--CCCEEEEEECC
Confidence 5 56799999954
No 33
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.53 E-value=2.9e-13 Score=102.96 Aligned_cols=108 Identities=20% Similarity=0.351 Sum_probs=82.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++...... .....+.|+. ...+ .|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|.+..
T Consensus 242 p~v~W~~~~~~~~~~---~~~~~~~~~~--~~~~----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 312 (388)
T 2v5m_A 242 PSFRWYKFIEGTTRK---QAVVLNDRVK--QVSG----TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKI 312 (388)
T ss_dssp CEEEEEEECTTSSCE---EECCCSSSEE--EETT----EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEE
T ss_pred CEEEEEecCCCCccc---ccccccCcee--cccC----EEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCcccc
Confidence 368999975321111 0112234444 2234 8999999999999999999998 7677778888988887777
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
.+....+.+|+.+.|.|.+.|.| .|.+.|+++|.++..
T Consensus 313 ~~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g~~i~~ 350 (388)
T 2v5m_A 313 DPPTQTVDFGRPAVFTCQYTGNP--IKTVSWMKDGKAIGH 350 (388)
T ss_dssp ESSEEEECTTSCEEEEEEEEEEC--CCEEEEEETTEECSC
T ss_pred CCCcEEecCCCCEEEEEEecccc--CCeEEEEECCEECcc
Confidence 77788899999999999999964 569999999998764
No 34
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.53 E-value=4.2e-14 Score=99.36 Aligned_cols=93 Identities=19% Similarity=0.317 Sum_probs=65.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEec----cceeeecCCcEEEcCCCcEEEEEEee
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVE----PITQIIGGPDMYINKGSTMNLTCVIK 102 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~l~C~~~ 102 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.......+.|.|.. +|.+...++...+.+|+.+.|.|.+.
T Consensus 64 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 143 (210)
T 3d9a_H 64 KSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVK 143 (210)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEE
T ss_pred CceEEEEecCCCCEEEEEECCCCcccCEEEEEEEecCcccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEe
Confidence 46887654322346689999999999999999998852222335666653 34444333334467899999999999
Q ss_pred cCCCCCC-eeEEEECCEEe
Q psy1826 103 HSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 103 ~~p~p~~-~i~W~~~~~~~ 120 (169)
+.. |.| .+.|++++..+
T Consensus 144 g~~-P~p~~v~W~~~~~~~ 161 (210)
T 3d9a_H 144 GYF-PEPVTVTWNSGSLSS 161 (210)
T ss_dssp EEB-SSCCEEEEGGGTBCT
T ss_pred eEe-cCCcEEEEeeCCccc
Confidence 862 556 99999988764
No 35
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.53 E-value=1.5e-12 Score=94.95 Aligned_cols=108 Identities=21% Similarity=0.323 Sum_probs=81.2
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++. .+. ...++..... .+...|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.+..
T Consensus 35 ~~v~W~~~~~-~~~--------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~ 103 (284)
T 2rik_A 35 IKITWAKDNR-EIR--------PGGNYKMTLV--ENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIK 103 (284)
T ss_dssp CEEEEEETTE-ECC--------SSSSEEEEEE--TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEE
T ss_pred CEEEEEECCE-ECc--------CCCcEEEEEc--CCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccc
Confidence 4789999874 111 1234432221 23458999999999999999999987 6666778888888887665
Q ss_pred cC-CcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 83 GG-PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 83 ~~-~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.. ....+.+|+.+.|.|.+.+. |.+.+.|++++..+....
T Consensus 104 ~~~~~~~v~~g~~~~l~C~~~g~--p~~~v~W~~~~~~~~~~~ 144 (284)
T 2rik_A 104 KLEPSRIVKQDEHTRYECKIGGS--PEIKVLWYKDETEIQESS 144 (284)
T ss_dssp CCCSEEEEETTCCEEEEEEEESS--SCCEEEEEETTEECCCSS
T ss_pred cCCCceEecCCceEEEEEEEeee--CCCEEEEEECCEECcCCC
Confidence 54 35678899999999999986 567999999999886554
No 36
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.53 E-value=1.7e-13 Score=94.95 Aligned_cols=82 Identities=21% Similarity=0.334 Sum_probs=68.4
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCC-eeEEEECC
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPP-AIYWLHNT 117 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~-~i~W~~~~ 117 (169)
..|.|.+++.+|+|.|.|.+.+. +. ....+.|.|..+|.+...+....+.+|+.+.|.|.+.+. |.| .+.|++++
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~~v~W~~~~ 145 (195)
T 2c5d_C 68 SQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGP--PEPVDLLWLQDA 145 (195)
T ss_dssp EEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECS--SCCCEEEEEESS
T ss_pred cEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCC--CCCCEEEEEECC
Confidence 38999999999999999999987 32 233478888888887777778889999999999999996 456 99999999
Q ss_pred EEeeccc
Q psy1826 118 EVSQLNL 124 (169)
Q Consensus 118 ~~~~~~~ 124 (169)
.++....
T Consensus 146 ~~~~~~~ 152 (195)
T 2c5d_C 146 VPLATAP 152 (195)
T ss_dssp CBSSSST
T ss_pred EeccCCC
Confidence 8876544
No 37
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.52 E-value=1.7e-13 Score=96.62 Aligned_cols=93 Identities=20% Similarity=0.261 Sum_probs=64.9
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC----ceEEEEEEEe----ccceeeecCCcEEEcCCCcEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP----IGISMYLSVV----EPITQIIGGPDMYINKGSTMNL 97 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~----~~~~~~l~v~----~~p~~~~~~~~~~v~~g~~~~l 97 (169)
..|+.+.. . .+.+.|.|.+++.+|+|.|.|.+.+. +. ....+.|.|. .+|.+...++...+.+|+.+.|
T Consensus 63 ~~r~~~~~-~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l 140 (215)
T 3nl4_H 63 KGRFTISK-T-STTVDLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTL 140 (215)
T ss_dssp TTTEEEEE-C-SSEEEEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEE
T ss_pred cCCEEEEe-e-CCEEEEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEE
Confidence 46888654 2 46778999999999999999999886 31 3344567776 3444443344445567999999
Q ss_pred EEEeecCCCCCCeeEEEECCEEee
Q psy1826 98 TCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 98 ~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
.|.+.+.+.+++.+.|++++..+.
T Consensus 141 ~C~~~~~~p~~~~v~W~~~g~~~~ 164 (215)
T 3nl4_H 141 GCLVKGYLPEPVTVTWNSGTLTNG 164 (215)
T ss_dssp EEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred EEEEeeeeCCCeEEEEeeCCEECC
Confidence 999999753456788999887543
No 38
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.52 E-value=2.1e-13 Score=95.22 Aligned_cols=114 Identities=18% Similarity=0.288 Sum_probs=78.1
Q ss_pred CcEEEEEEcCceeEE-EE-cce-eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C--CceEEEEEEEec
Q psy1826 3 LAQISWVRHRDIHLL-TV-SGY-TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P--PIGISMYLSVVE 76 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~-~~-~~~-~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~--~~~~~~~l~v~~ 76 (169)
...|.|+|++..... .. ... ......|+.. .. . .|.|.+++.+|+|.|.|.+.+. + .....+.|.|..
T Consensus 30 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~-~----~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~ 103 (212)
T 1f97_A 30 SPRVEWKFVQGSTTALVCYNSQITAPYADRVTF-SS-S----GITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLV 103 (212)
T ss_dssp SEEEEEEEEETTEEEEEEETTEECGGGTTTEEE-ET-T----EEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEB
T ss_pred CcEEEEEECCCceeeEEecCCcccccccCcEEe-ec-e----eEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEc
Confidence 357899997643111 00 000 0122456663 22 4 8999999999999999999986 4 345567888887
Q ss_pred cceeeecCCcEEEcCCCcEEEEEE-eecCCCCCCeeEEEECCE-Eeeccc
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCV-IKHSPEPPPAIYWLHNTE-VSQLNL 124 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~-~~~~p~p~~~i~W~~~~~-~~~~~~ 124 (169)
+|.+...+....+.+|+.+.|.|. +.+. |.|.+.|++++. ++....
T Consensus 104 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~--p~~~i~W~~~~~~~l~~~~ 151 (212)
T 1f97_A 104 PPSKPTISVPSSVTIGNRAVLTCSEHDGS--PPSEYSWFKDGISMLTADA 151 (212)
T ss_dssp CCCCCEEECCSEEETTSCEEEEEECSCCB--SCCEEEEEETTEESBC---
T ss_pred CCCCcccCCccccCCCCeEEEEEEcccCc--CCCEEEEEeCCcccccccc
Confidence 776554445567889999999999 6775 567999999998 766543
No 39
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.52 E-value=5.9e-13 Score=98.34 Aligned_cols=108 Identities=20% Similarity=0.405 Sum_probs=76.3
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCC-CCCeEEEEEEEcC-CCceEEEEEEEecc----
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQK-RDSGIYECQVSTT-PPIGISMYLSVVEP---- 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~~~~-~~~~~~~~l~v~~~---- 77 (169)
..|.|+|++. .+. ..|+............|.|.+++. +|+|.|.|.+.+. +.....+.|.|..+
T Consensus 36 ~~i~W~k~g~--~i~--------~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p 105 (304)
T 2yd9_A 36 PRVTWNKKGK--KVN--------SQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLP 105 (304)
T ss_dssp CEEEEC-----------------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCC
T ss_pred CeEEEEECCE--ECC--------CCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCC
Confidence 4789998864 221 134443321211235899999998 9999999999988 66666778888765
Q ss_pred ---ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 78 ---ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 78 ---p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
|.+...+....+.+|+.+.|.|.+.+. |.|.+.|++++.++...
T Consensus 106 ~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~--p~~~v~W~k~~~~~~~~ 152 (304)
T 2yd9_A 106 SGFPNIDMGPQLKVVERTRTATMLCAASGN--PDPEITWFKDFLPVDPS 152 (304)
T ss_dssp TTCCEEEECCCCEEEETTSCEEECCEEECS--SCCEEEEEETTEECCGG
T ss_pred CCCCeeecCCccEEEeCCCeEEEEEECccC--CCCeEEEEECCEECcCC
Confidence 455555667788999999999999986 45699999999988654
No 40
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.51 E-value=1.9e-13 Score=104.40 Aligned_cols=106 Identities=22% Similarity=0.470 Sum_probs=83.1
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++. .+.. ...++. ..... .|.|.++..+|+|.|.|.+.|. +.....+.|.|..+|.+..
T Consensus 251 ~~~~W~~~~~--~~~~------~~~~~~-~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 317 (403)
T 3laf_A 251 PSFTWLRGEE--VIQL------RSKKYS-LLGGS----NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLN 317 (403)
T ss_dssp CEEEEEETTE--ECCC------SSSSEE-EETTT----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEE
T ss_pred CeEEEEECCe--eccC------CCceEE-ECCcc----EEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEee
Confidence 3689998763 2111 123444 33344 8999999999999999999998 6677788888988888877
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+....+.+|+.+.|.|.+.+.| .|.+.|+++|..+....
T Consensus 318 ~~~~~~~~~g~~v~l~C~~~g~p--~p~v~W~~~g~~~~~~~ 357 (403)
T 3laf_A 318 HPSNLYAYESMDIEFECAVSGKP--VPTVNWMKNGDVVIPSD 357 (403)
T ss_dssp CCCCEECCTTCCEEECCEEEEES--CCEEEEEETTEECCCSS
T ss_pred cCcceEEecCCeEEEEEEEeecc--CCEEEEEECCEECCCCC
Confidence 77888899999999999999964 56999999999876543
No 41
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.51 E-value=1.6e-13 Score=102.44 Aligned_cols=156 Identities=18% Similarity=0.199 Sum_probs=89.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecC---CCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-----ceEEEEEEE
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKP---QNEDWTLQIKYPQKRDSGIYECQVSTT-PP-----IGISMYLSV 74 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-----~~~~~~l~v 74 (169)
..|.|+|++...........-....|+...... ......|.|.+++.+|+|.|.|.+.+. +. ....+.|.|
T Consensus 34 ~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V 113 (327)
T 2wng_A 34 GPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSV 113 (327)
T ss_dssp CCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEE
T ss_pred ceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEE
Confidence 469999987421111100000112355532211 023447999999999999999999987 32 113357777
Q ss_pred ecccee-eecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeec
Q psy1826 75 VEPITQ-IIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKL 153 (169)
Q Consensus 75 ~~~p~~-~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (169)
..+|.. ....+...+.+|+.+.|.|.+.+.|.|+..+.|+++|.++.......... .....+...+.|.+.....+
T Consensus 114 ~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~---~~~~~~~~~s~L~i~~~~~d 190 (327)
T 2wng_A 114 RAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPV---GESVSYSIHSTAKVVLTRED 190 (327)
T ss_dssp EBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECS---SCCSCEEEEEEEEEECCTTG
T ss_pred EecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccc---cCCCceEEEEEEEEechhcC
Confidence 655421 12233466789999999999999753334999999999886543211111 01112223344555555555
Q ss_pred -eeeEEEeee
Q psy1826 154 -EATYILAGT 162 (169)
Q Consensus 154 -~~~~~~~~~ 162 (169)
.+.|.+...
T Consensus 191 ~~g~Y~C~a~ 200 (327)
T 2wng_A 191 VHSQVICEVA 200 (327)
T ss_dssp GGCEEEEEEE
T ss_pred cCceEEEEEe
Confidence 466666543
No 42
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.51 E-value=3.3e-13 Score=98.75 Aligned_cols=109 Identities=23% Similarity=0.424 Sum_probs=81.0
Q ss_pred cEEEEEE-cCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-CceEEEEEEEecccee
Q psy1826 4 AQISWVR-HRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-PIGISMYLSVVEPITQ 80 (169)
Q Consensus 4 ~~V~W~k-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-~~~~~~~l~v~~~p~~ 80 (169)
..|.|+| ++. .+. ....|+...... .....|.|.+++.+|+|.|.|.+.+. + .....+.|.|..+|.+
T Consensus 33 ~~i~W~~~~g~--~~~------~~~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~ 103 (291)
T 1qz1_A 33 KDISWFSPNGE--KLS------PNQQRISVVWND-DDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMF 103 (291)
T ss_dssp CEEEEECTTSC--BCC------SSCSSEEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEE
T ss_pred cEeEEECCCCe--ECc------cCCceEEEEEcC-CCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccc
Confidence 6799998 442 211 122455533221 24558999999999999999999987 3 3445677778888877
Q ss_pred eecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 81 IIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 81 ~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
...+....+.+|+.+.|.|.+.+. |+|.+.|++++..+...
T Consensus 104 ~~~~~~~~~~~g~~v~l~C~~~~~--p~~~v~W~~~~~~~~~~ 144 (291)
T 1qz1_A 104 KNAPTPQEFKEGEDAVIVCDVVSS--LPPTIIWKHKGRDVILK 144 (291)
T ss_dssp EECCSSEEEETTSCEEECCEEECS--SCCEEEEEETTSCSSTT
T ss_pred cCCCCcccccCCCeEEEEEEeccC--CCCEEEEEECCEEcccC
Confidence 777778889999999999999996 45699999999877544
No 43
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.51 E-value=9.7e-14 Score=98.29 Aligned_cols=94 Identities=21% Similarity=0.298 Sum_probs=67.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-----CceEEEEEEEec----cceeeecCCcEEEcCCCcEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-----PIGISMYLSVVE----PITQIIGGPDMYINKGSTMN 96 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-----~~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~ 96 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + .....+.|.|.. +|.+...++...+.+|+.+.
T Consensus 67 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~ 146 (222)
T 1q9r_B 67 KGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVT 146 (222)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEE
T ss_pred CCceEEEEECCCCeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEE
Confidence 3688865543345679999999999999999999886 2 233445777764 34444333333456899999
Q ss_pred EEEEeecCCCCCC-eeEEEECCEEee
Q psy1826 97 LTCVIKHSPEPPP-AIYWLHNTEVSQ 121 (169)
Q Consensus 97 l~C~~~~~p~p~~-~i~W~~~~~~~~ 121 (169)
|.|.+.+. .|.| .+.|+++|..+.
T Consensus 147 L~C~~~g~-~P~p~~v~W~~~g~~~~ 171 (222)
T 1q9r_B 147 LGCLVKGY-FPEPVTVTWNSGSLSSG 171 (222)
T ss_dssp EEEEEEEE-BSSCCEEEEGGGTBCTT
T ss_pred EEEEEccE-ECCCCEEEEecCCeEcc
Confidence 99999985 2556 999999987653
No 44
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.51 E-value=2.6e-13 Score=95.96 Aligned_cols=119 Identities=13% Similarity=0.054 Sum_probs=81.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecC-CCC--CCeeEEEECC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHS-PEP--PPAIYWLHNT 117 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p--~~~i~W~~~~ 117 (169)
.|.|.+++.+|+|.|.|.+.+. +.....++|+|..+|......+. ...+|+.+ |.|.+.+. |.+ .+.+.|++++
T Consensus 60 ~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~ 137 (210)
T 1gsm_A 60 VLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGG 137 (210)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETT
T ss_pred EEEECccCcccCceEEEEEEeCCCceEEEEEEEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECC
Confidence 7999999999999999999998 55667889999988854443233 56678888 99999985 433 3589999999
Q ss_pred EEeecccccc-ee-----ecceeeEEEEEEEEeeEEEEeeece-eeEEEeee
Q psy1826 118 EVSQLNLMQR-ES-----ESSSFVKRLVVLLSVSIVELTWKLE-ATYILAGT 162 (169)
Q Consensus 118 ~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 162 (169)
.++....... .. ........++.+.+++.+...++|. +.|.+...
T Consensus 138 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~ 189 (210)
T 1gsm_A 138 QELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQAT 189 (210)
T ss_dssp EECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEE
T ss_pred EEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEE
Confidence 9985432111 00 1111122355556677777777773 55555443
No 45
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.51 E-value=9.6e-13 Score=94.51 Aligned_cols=91 Identities=16% Similarity=0.303 Sum_probs=65.8
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC--ceEEEEEEEecc---------------ceeeecCCcEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP--IGISMYLSVVEP---------------ITQIIGGPDMY 88 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~--~~~~~~l~v~~~---------------p~~~~~~~~~~ 88 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. .. ....+.|.|..+ +.+...+..+.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (247)
T 2ghw_B 67 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLS 146 (247)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEE
T ss_pred cCcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEE
Confidence 4688765543346678999999999999999999885 11 222346777643 22333455678
Q ss_pred EcCCCcEEEEEEeecCCCCCCeeEEEE--CCEE
Q psy1826 89 INKGSTMNLTCVIKHSPEPPPAIYWLH--NTEV 119 (169)
Q Consensus 89 v~~g~~~~l~C~~~~~p~p~~~i~W~~--~~~~ 119 (169)
+.+|+.+.|.|.+.+.| ++.+.|++ ++..
T Consensus 147 v~~G~~v~L~C~~~~~~--~~~v~W~k~~~g~~ 177 (247)
T 2ghw_B 147 LSPGERATLSCRASQSV--RSNLAWYQQKPGQA 177 (247)
T ss_dssp ECTTSCEEEEEEESSCC--TTCEEEEEECTTSC
T ss_pred ecCCCcEEEEEEeCCCc--cceEEEEEECCCCC
Confidence 99999999999999864 45999998 5543
No 46
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.50 E-value=4.4e-13 Score=97.99 Aligned_cols=105 Identities=13% Similarity=0.220 Sum_probs=77.3
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEEe----ccc
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSVV----EPI 78 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v~----~~p 78 (169)
.|.|++.++... ..+.++. ...++ .|.|.+++.+|+|.|.|.+.+. +.....+.|.|. .+|
T Consensus 121 ~v~W~~~~~~~~--------~~~~~~~-~~~~~----~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p 187 (289)
T 3ejj_X 121 SVSLMREGGRQV--------LRKTVYF-FSPWR----GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPP 187 (289)
T ss_dssp SEEEEEGGGEEC--------CTTCCEE-EETTT----EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCC
T ss_pred EEEEEecCCeec--------CCCccEE-ECCCC----CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCC
Confidence 389987553222 1234555 34445 8999999999999999999843 444456677777 566
Q ss_pred eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 79 TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 79 ~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+...+....+.+|+.+.|.|.+.+. .|.+.+.|++++..+...
T Consensus 188 ~i~~~~~~~~~~~g~~~~l~C~~~~~-~p~~~i~W~~~~~~~~~~ 231 (289)
T 3ejj_X 188 QIKLEPSKLVRIRGEAAQIVCSATNA-EVGFNVILKRGDTKLEIP 231 (289)
T ss_dssp EEEEESSSEECCSSSCEEEEEEEEES-SSCCEEEEEETTEECCCC
T ss_pred eEEecCCceEEEeCCcEEEEEEeCCC-CCceEEEEEECCEEeecc
Confidence 66666667777899999999999983 356799999999987654
No 47
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.50 E-value=4.4e-13 Score=92.02 Aligned_cols=107 Identities=28% Similarity=0.470 Sum_probs=74.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCc--eEEEEEEEecccee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPI--GISMYLSVVEPITQ 80 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~--~~~~~l~v~~~p~~ 80 (169)
..|.|+|++. .... ..+.|+. ...++ .|.|.+++.+|+|.|.|.+.+. ... ...+.+.+..+|.+
T Consensus 32 ~~v~W~~~~~-~~~~------~~~~~~~-~~~~~----~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~ 99 (189)
T 2v5t_A 32 PAVSWLYHNE-EVTT------ISDNRFA-MLANN----NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAI 99 (189)
T ss_dssp CEEEEEC------CB------CCCTTEE-ECTTS----CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEE
T ss_pred CEEEEEECCc-ccee------ccCCeEE-EecCC----CEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCc
Confidence 4789998763 1211 1235666 33344 7999999999999999999887 332 23456666667765
Q ss_pred eecCC--cEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 81 IIGGP--DMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 81 ~~~~~--~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
..... ...+.+|+.+.|.|.+.+. |.|.+.|++++.++....
T Consensus 100 ~~~~~~~~~~~~~g~~v~l~C~~~g~--p~~~v~W~~~g~~~~~~~ 143 (189)
T 2v5t_A 100 SMPQKSFNATAERGEEMTFSCRASGS--PEPAISWFRNGKLIEENE 143 (189)
T ss_dssp ECSCCEEEEETTSCCCEEEECEEEEE--SCCEEEEEETTEECCCSS
T ss_pred ccccccccccccCCCcEEEEEEEccC--CCCeEEEEECCEECcCCC
Confidence 54443 4567899999999999986 456999999999887554
No 48
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.50 E-value=4.3e-13 Score=94.08 Aligned_cols=95 Identities=22% Similarity=0.263 Sum_probs=66.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEe
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVI 101 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~ 101 (169)
..|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. +. ......|.|.. +|.+...++...+.+|+.+.|.|.+
T Consensus 58 ~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~ 135 (210)
T 1lk3_L 58 PARFSGSGS--GTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLM 135 (210)
T ss_dssp CTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEE
T ss_pred cccEEEEec--CCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEE
Confidence 367775432 24668999999999999999999886 32 22234666654 4554444443334479999999999
Q ss_pred ecCCCCCCeeEEEECCEEeecc
Q psy1826 102 KHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 102 ~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+.+.+++.+.|+++|.++..+
T Consensus 136 ~g~~p~~~~v~W~k~g~~~~~~ 157 (210)
T 1lk3_L 136 NNFYPRDISVKWKIDGTERRDG 157 (210)
T ss_dssp EEEBSSCCEEEEEETTEECCTT
T ss_pred EeEeCCceEEEEEeCCccCCCC
Confidence 9853233589999999987654
No 49
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.50 E-value=1.9e-13 Score=95.98 Aligned_cols=94 Identities=23% Similarity=0.291 Sum_probs=66.2
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEee
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIK 102 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~ 102 (169)
.|+..... .+.+.|.|.+++.+|+|.|.|.+.+. +. ....+.|.|.. +|.+...++...+.+|+.+.|.|.+.
T Consensus 60 ~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~ 137 (213)
T 3d9a_L 60 SRFSGSGS--GTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLN 137 (213)
T ss_dssp TTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred ccEEEEcC--CCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEe
Confidence 57775432 24568999999999999999999887 32 22234666654 55544444433344788999999998
Q ss_pred cCCCCCCeeEEEECCEEeecc
Q psy1826 103 HSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 103 ~~p~p~~~i~W~~~~~~~~~~ 123 (169)
+.+.++..+.|+++|.++...
T Consensus 138 g~~p~~~~v~W~k~g~~~~~~ 158 (213)
T 3d9a_L 138 NFYPKDINVKWKIDGSERQNG 158 (213)
T ss_dssp EEBSSCCEEEEEETTEEECTT
T ss_pred eecCCceEEEEEcCCCcCcce
Confidence 853233489999999988754
No 50
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.50 E-value=9.8e-13 Score=92.96 Aligned_cols=80 Identities=24% Similarity=0.361 Sum_probs=64.4
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEecc---------------ceeeecCCcEEEcCCCcEEEEEEeecC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEP---------------ITQIIGGPDMYINKGSTMNLTCVIKHS 104 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~---------------p~~~~~~~~~~v~~g~~~~l~C~~~~~ 104 (169)
.|.|.+++..|+|.|.|.+.+. +. .+..+.|.|... |.+...+....+.+|+.+.|.|.+.+.
T Consensus 66 ~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~ 145 (218)
T 3k0w_A 66 ELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGS 145 (218)
T ss_dssp EEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBS
T ss_pred EEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEeccc
Confidence 8999999999999999999987 42 244467777654 455555667889999999999999886
Q ss_pred CCCCCeeEEEECCEEeecc
Q psy1826 105 PEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 105 p~p~~~i~W~~~~~~~~~~ 123 (169)
|.|.+.|++++..+...
T Consensus 146 --p~~~v~W~~~~~~~~~~ 162 (218)
T 3k0w_A 146 --PIPHYQWFKNELPLTHE 162 (218)
T ss_dssp --SCCEEEEEETTEECTTC
T ss_pred --CCCeEEEEECCEECCCC
Confidence 46699999999987654
No 51
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.49 E-value=6.3e-13 Score=95.00 Aligned_cols=112 Identities=20% Similarity=0.306 Sum_probs=76.5
Q ss_pred CcEEEEEEcCce---eEEEEccee--ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEe
Q psy1826 3 LAQISWVRHRDI---HLLTVSGYT--YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~---~~~~~~~~~--~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~ 75 (169)
...|.|+|+... ..+...... .....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. +. ....+.|.|.
T Consensus 34 ~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~ 111 (240)
T 1moe_A 34 VGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGS--RTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIK 111 (240)
T ss_dssp EECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred CceEEEEEECCCCCceEEEEEecccCcCCCccEEEEec--CCeEEEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEe
Confidence 457999996421 111111100 012468875432 35668999999999999999999887 32 4445677776
Q ss_pred ccc------eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 76 EPI------TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 76 ~~p------~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.++ ..+..+....+.+|+.+.|.|.+.+.|.|.+.+.|+++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 112 GGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp CCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred cCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 542 23444667789999999999999997644579999985
No 52
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.49 E-value=1.2e-12 Score=93.61 Aligned_cols=95 Identities=14% Similarity=0.199 Sum_probs=62.9
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C--C----ceEEEEEEEec----cceeeecCCcEEEcCC-Cc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P--P----IGISMYLSVVE----PITQIIGGPDMYINKG-ST 94 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~--~----~~~~~~l~v~~----~p~~~~~~~~~~v~~g-~~ 94 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + . ....+.|.|.. +|.+....+...+.+| +.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~ 143 (232)
T 1dn0_B 64 KSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSS 143 (232)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCS
T ss_pred CCeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCc
Confidence 4688865543346779999999999999999999831 1 1 22345777765 2333322223334578 99
Q ss_pred EEEEEEeecCCCCCC-eeEEEE-CCEEeec
Q psy1826 95 MNLTCVIKHSPEPPP-AIYWLH-NTEVSQL 122 (169)
Q Consensus 95 ~~l~C~~~~~p~p~~-~i~W~~-~~~~~~~ 122 (169)
+.|.|.+.+. .|.| .++|++ +|..+..
T Consensus 144 v~L~C~~~g~-~P~p~~v~W~~~~g~~l~~ 172 (232)
T 1dn0_B 144 VAVGCLAQDF-LPDSITFSWKYKNNSDISS 172 (232)
T ss_dssp EEEEEEEEEE-BSSCCEEEEEETTSCEECC
T ss_pred EEEEEEEEEE-eCCCeEEEEEcCCCCceee
Confidence 9999999986 2444 999999 8887754
No 53
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.49 E-value=4.9e-13 Score=98.54 Aligned_cols=109 Identities=15% Similarity=0.282 Sum_probs=78.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++.. +. . ...++...... .+...|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|.+..
T Consensus 34 ~~v~W~~~~~~-~~-~------~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 104 (305)
T 2nzi_A 34 PIVKWYRQGKE-II-A------DGLKYRIQEFK-GGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHL 104 (305)
T ss_dssp CEEEEEETTEE-CC-C------CSSSEEEEEET-TTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEEECC
T ss_pred CeEEEEECCEE-cc-c------CCCeEEEEECC-CCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCccCC
Confidence 47899998742 11 1 12344432222 24558999999999999999999997 5566677888876665332
Q ss_pred -----cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 83 -----GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 83 -----~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+....+.+|+.+.|.|.+.+.| .|.+.|++++..+..+
T Consensus 105 ~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~~~~~~~ 148 (305)
T 2nzi_A 105 PKTLEGMGAVHALRGEVVSIKIPFSGKP--DPVITWQKGQDLIDNN 148 (305)
T ss_dssp CHHHHSSCCEEEETTCCEEEEEEEEEES--CCEEEEEESSSBCCSS
T ss_pred CccccccccEEecCCCEEEEEEEECCCC--CCEEEEEECCEECCCC
Confidence 22457788999999999999964 5699999998877644
No 54
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.49 E-value=1.3e-12 Score=92.55 Aligned_cols=119 Identities=19% Similarity=0.193 Sum_probs=78.2
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEEeccc---eeeecCCcEEEcCCCcE-EEEEEe-ecCCCCCCeeEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSVVEPI---TQIIGGPDMYINKGSTM-NLTCVI-KHSPEPPPAIYWL 114 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v~~~p---~~~~~~~~~~v~~g~~~-~l~C~~-~~~p~p~~~i~W~ 114 (169)
.|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+| .+...+....+.+|+.+ .|.|.+ .+. |.|.+.|+
T Consensus 78 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~--p~p~i~W~ 155 (231)
T 2pet_A 78 RLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGN--PAPKITWY 155 (231)
T ss_dssp CEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEB--SCCEEEEE
T ss_pred eEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcc--cCCEEEEE
Confidence 5999999999999999999886 445566778887664 33333445667789988 999999 675 56799999
Q ss_pred ECCEEeecccc---cceeec--ceeeEEEEEEEEeeEEEEeeec-eeeEEEeee
Q psy1826 115 HNTEVSQLNLM---QRESES--SSFVKRLVVLLSVSIVELTWKL-EATYILAGT 162 (169)
Q Consensus 115 ~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 162 (169)
+++.++..... ...... ...........+.|.+...+.| .+.|.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~ 209 (231)
T 2pet_A 156 RNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAH 209 (231)
T ss_dssp ETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEE
T ss_pred ECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEE
Confidence 99999876551 111000 0000111222355666666665 666665543
No 55
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.49 E-value=4.9e-13 Score=101.57 Aligned_cols=80 Identities=21% Similarity=0.314 Sum_probs=70.3
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
.|.|.++..+|+|.|.|.+.|. +.....+.|.|..+|.+...+....+.+|+.+.|.|.+.|.| .|.+.|+++|.++
T Consensus 258 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~v~W~~~g~~~ 335 (382)
T 1cs6_A 258 LLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKP--RPAVRWLRDGQPL 335 (382)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEES--CCEEEEEETTEEC
T ss_pred EEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeec--CCEEEEEECCEEC
Confidence 8999999999999999999998 666677888888888877777788899999999999999964 5699999999988
Q ss_pred ecc
Q psy1826 121 QLN 123 (169)
Q Consensus 121 ~~~ 123 (169)
...
T Consensus 336 ~~~ 338 (382)
T 1cs6_A 336 ASQ 338 (382)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 56
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.49 E-value=4.4e-13 Score=94.23 Aligned_cols=78 Identities=18% Similarity=0.263 Sum_probs=62.5
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
.|.|.+++.+|+|.|.|.+.+. ..+..+.|.|..+|.+... +...+.+|+.+.|.|.+.+.+ |.+.+.|+++|..+.
T Consensus 55 ~L~i~~v~~~D~G~Y~C~a~n~-~~s~~~~l~V~~~p~~~~~-~~~~v~~G~~v~L~C~~~~~~-p~~~v~W~k~g~~~~ 131 (204)
T 3sgj_C 55 SYFIDAATVDDSGEYRCQTQLS-TLSDPVQLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNT-ALHKVTYLQNGKGRK 131 (204)
T ss_dssp EEEESSCCGGGCEEEEEEETTS-BCCCCEEEEEECSSEEEEC-SCSEEETTCCEEEEEEEGGGC-CCEEEEEEETTEEEE
T ss_pred EEEEecccccCCEEEEEEeCCC-cccccEEEEEecCceEecC-CceeEeCCCcEEEEEEecCCC-CCceEEEEECCcEee
Confidence 8999999999999999999874 3344567778777765444 347788999999999997763 567999999999865
Q ss_pred c
Q psy1826 122 L 122 (169)
Q Consensus 122 ~ 122 (169)
.
T Consensus 132 ~ 132 (204)
T 3sgj_C 132 Y 132 (204)
T ss_dssp E
T ss_pred c
Confidence 3
No 57
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.49 E-value=2.2e-13 Score=96.03 Aligned_cols=117 Identities=19% Similarity=0.203 Sum_probs=74.1
Q ss_pred cEEEEEEcCceeEE---EEccee--ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCC---ceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHLL---TVSGYT--YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPP---IGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~---~~~~~~--~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~---~~~~~~l~v~ 75 (169)
..|.|+|++.+..+ ...... .....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+... ......|.|.
T Consensus 32 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 109 (216)
T 2xzc_L 32 NYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKS--GTSATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIK 109 (216)
T ss_dssp SCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEE--TTEEEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEEC
T ss_pred CeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEecc--CCEEEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEc
Confidence 57999996521111 110000 011357775432 2466899999999999999999998622 2223456665
Q ss_pred ---ccceeeecCCcEEEcCCCcEEEEEEeecCCCCC-CeeEEEECCEEeecc
Q psy1826 76 ---EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPP-PAIYWLHNTEVSQLN 123 (169)
Q Consensus 76 ---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~-~~i~W~~~~~~~~~~ 123 (169)
.+|.+...++.....+|+.+.|.|.+.+.+ |+ ..++|+++|.++...
T Consensus 110 ~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~-P~~~~v~W~k~g~~~~~~ 160 (216)
T 2xzc_L 110 RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFY-PREAKVQWKVDNALQSGN 160 (216)
T ss_dssp CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEB-SSCCEEEEEETTEECCSS
T ss_pred CCCCCCceEEeCCChhhccCCcEEEEEEEEeEc-CCceEEEEEECCeecCCC
Confidence 344444433322233688999999999853 44 489999999987654
No 58
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.48 E-value=1.2e-12 Score=94.63 Aligned_cols=88 Identities=14% Similarity=0.261 Sum_probs=66.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-------------CCceEEEEEEEecc---------------c
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-------------PPIGISMYLSVVEP---------------I 78 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-------------~~~~~~~~l~v~~~---------------p 78 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. ......+.|.|..+ +
T Consensus 71 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~ 150 (256)
T 3juy_B 71 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEI 150 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCC
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCccee
Confidence 4688866544456778999999999999999999874 11233456777653 3
Q ss_pred eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 79 TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 79 ~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.++..+....+.+|+.+.|.|.+.+.| +.+.+.|++
T Consensus 151 ~~~~~~~~~~v~~G~~v~L~C~~~~~~-~~~~v~W~k 186 (256)
T 3juy_B 151 VLTQAPGTLSLSPGERATFSCRSSHSI-RSRRVAWYQ 186 (256)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCC-TTCCEEEEE
T ss_pred EEEecCCeEEEeCCCCEEEEEEECCCc-CCeeEEEEE
Confidence 445556778899999999999999864 237999997
No 59
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.48 E-value=1.5e-13 Score=97.77 Aligned_cols=119 Identities=22% Similarity=0.289 Sum_probs=76.1
Q ss_pred CcEEEEEEcCcee---EEEEcc--eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEe
Q psy1826 3 LAQISWVRHRDIH---LLTVSG--YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v~ 75 (169)
...|.|+|+.... .+.... .....+.|+..... .+.+.|.|.+++.+|+|.|.|.+.+.. .......+.|.
T Consensus 53 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~ 130 (237)
T 3sob_L 53 STAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGS--GTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIK 130 (237)
T ss_dssp TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred CceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcC--CCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEe
Confidence 3578999854211 111111 11122467775432 356689999999999999999998762 22333456663
Q ss_pred ---ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 76 ---EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 76 ---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+|.+...++...+.+|+.+.|.|.+.+.+.+.+.++|+++|.++..+
T Consensus 131 ~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~ 181 (237)
T 3sob_L 131 RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 181 (237)
T ss_dssp CCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred cCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCc
Confidence 344444434444445688899999999864226899999999988653
No 60
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.48 E-value=3.3e-13 Score=94.76 Aligned_cols=118 Identities=19% Similarity=0.214 Sum_probs=74.9
Q ss_pred cEEEEEEcCceeEE---EEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEe-
Q psy1826 4 AQISWVRHRDIHLL---TVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVV- 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~---~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~- 75 (169)
..|.|+|++....+ ....... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. +. ......|.|.
T Consensus 33 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 110 (212)
T 1q0x_L 33 NYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLI--GDKAALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLG 110 (212)
T ss_dssp GCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred CeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEee--CCEEEEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEec
Confidence 57999986421111 1110000 12367765432 24568999999999999999999886 31 2233456663
Q ss_pred ---ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 76 ---EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 76 ---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+|.+...++...+.+|+.+.|.|.+.+.+.|+..+.|+++|.++..+
T Consensus 111 ~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 161 (212)
T 1q0x_L 111 QPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAG 161 (212)
T ss_dssp SCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred CCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCC
Confidence 345444434433345788999999999864233499999999988654
No 61
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.48 E-value=6.5e-13 Score=94.82 Aligned_cols=94 Identities=17% Similarity=0.252 Sum_probs=62.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC---------CceEEEEEEEe----ccceeeecCCcEEEcCCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP---------PIGISMYLSVV----EPITQIIGGPDMYINKGS 93 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~---------~~~~~~~l~v~----~~p~~~~~~~~~~v~~g~ 93 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .......|.|. .+|.+...++...+..|+
T Consensus 69 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~ 148 (232)
T 3qhz_H 69 KTRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGG 148 (232)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------C
T ss_pred cCceEEEeccCCCEEEEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCC
Confidence 36888766555578899999999999999999998641 12233456665 234444344445566799
Q ss_pred cEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 94 TMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 94 ~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
.+.|.|.+.+.+.++..+.|++++..+
T Consensus 149 ~v~L~C~~~~~~P~~~~v~W~~~g~~~ 175 (232)
T 3qhz_H 149 TAALGCLVKDYFPEPVTVSWNSGALTS 175 (232)
T ss_dssp EEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred cEEEEEEEeeEeCCCeEEEEEECCEec
Confidence 999999999864235678899988643
No 62
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.48 E-value=2.2e-12 Score=103.26 Aligned_cols=114 Identities=18% Similarity=0.301 Sum_probs=82.7
Q ss_pred cEEEEEEcCcee----EEEEccee-ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc
Q psy1826 4 AQISWVRHRDIH----LLTVSGYT-YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP 77 (169)
Q Consensus 4 ~~V~W~k~~~~~----~~~~~~~~-~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~ 77 (169)
..|.|+|++... +....... .....|+.+......+.+.|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+
T Consensus 33 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~ 112 (585)
T 2ocw_A 33 TRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQG 112 (585)
T ss_pred ccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecC
Confidence 478999987421 11111000 0112566643322335568999999999999999999887 66677788999888
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCE
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTE 118 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~ 118 (169)
|.+...+....+.+|+.+.|.|.+.+.+ |++.+.|++++.
T Consensus 113 p~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~~~v~W~k~~~ 152 (585)
T 2ocw_A 113 PGLLNDTKVYTVDLGRTVTINCPFKTEN-AQKRKSLYKQIG 152 (585)
T ss_pred ccccCCCccEEEEcCCCEEEEEEecCCC-CCccEEEEECCC
Confidence 8877667778899999999999999764 567899999875
No 63
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.48 E-value=2.3e-13 Score=98.20 Aligned_cols=119 Identities=19% Similarity=0.263 Sum_probs=74.9
Q ss_pred CcEEEEEEcCceeEE---EEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEe
Q psy1826 3 LAQISWVRHRDIHLL---TVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~---~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~ 75 (169)
...|.|+|++.+..+ ....... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. .. ......+.|.
T Consensus 72 ~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 149 (254)
T 2c1o_A 72 KTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGS--GTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK 149 (254)
T ss_dssp CBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC
T ss_pred CCceEEEEeCCCCCceEEEEeccccCCCccceEEEecC--CCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEEC
Confidence 368999985421111 1110000 12367775432 24568999999999999999999886 32 2223456665
Q ss_pred c---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 76 E---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 76 ~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
. +|.+...++.....+|+.+.|.|.+.+.+.|++.++|+++|.++..+
T Consensus 150 ~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 200 (254)
T 2c1o_A 150 RADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 200 (254)
T ss_dssp CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTT
T ss_pred CCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCc
Confidence 3 45444433333334678999999999854234679999999987654
No 64
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.48 E-value=2.1e-12 Score=103.39 Aligned_cols=96 Identities=16% Similarity=0.231 Sum_probs=72.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSP 105 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p 105 (169)
+.|+.+......+.+.|.|.+++.+|+|.|.|.+ |. +.....+.|.|..+|..+..+....+.+|+.+.|.|.+.+.+
T Consensus 392 ~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~ 470 (585)
T 2ocw_A 392 EGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKF 470 (585)
T ss_pred CCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCC
Confidence 4577644322334456999999999999999998 65 666777888887655545556678899999999999997432
Q ss_pred --CCCCeeEEEECCEEeecc
Q psy1826 106 --EPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 106 --~p~~~i~W~~~~~~~~~~ 123 (169)
.|.|.+.|+++|..+...
T Consensus 471 ~~~p~~~v~W~k~g~~~~~~ 490 (585)
T 2ocw_A 471 SSYEKYWCKWNNTGCQALPS 490 (585)
T ss_pred CCCccEEEEEeecCceeeec
Confidence 366799999999887654
No 65
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.48 E-value=2.5e-12 Score=101.76 Aligned_cols=81 Identities=22% Similarity=0.345 Sum_probs=68.3
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecC---CcEEEcCCCcEEEEEEeecCCCCCCe-eEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGG---PDMYINKGSTMNLTCVIKHSPEPPPA-IYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~---~~~~v~~g~~~~l~C~~~~~p~p~~~-i~W~~~ 116 (169)
.|.|.++..+|+|.|.|.+.|. +.....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.| .|. +.|+++
T Consensus 274 ~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P--~p~~v~W~k~ 351 (524)
T 2ec8_A 274 TLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFP--KPEHQQWIYM 351 (524)
T ss_dssp EEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEES--CCCEEEEESS
T ss_pred EEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecC--CCcEEEEEEC
Confidence 8999999999999999999998 666678888898888765543 358899999999999999975 457 999999
Q ss_pred CEEeeccc
Q psy1826 117 TEVSQLNL 124 (169)
Q Consensus 117 ~~~~~~~~ 124 (169)
+.++....
T Consensus 352 g~~~~~~~ 359 (524)
T 2ec8_A 352 NRTFTDKW 359 (524)
T ss_dssp SCBCSSSB
T ss_pred CeeccCCc
Confidence 98876654
No 66
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.47 E-value=2.7e-13 Score=95.88 Aligned_cols=92 Identities=22% Similarity=0.329 Sum_probs=65.3
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-C---ceEEEEEEEec----cceeeecCCcEEEcCCCcEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-P---IGISMYLSVVE----PITQIIGGPDMYINKGSTMNLT 98 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-~---~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~l~ 98 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. . ....+.|.|.. +|.+...++...+.+|+.+.|.
T Consensus 67 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 146 (220)
T 1pz5_B 67 KGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLG 146 (220)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEE
T ss_pred CCcEEEEEeCCCCeEEEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEE
Confidence 46888654322356789999999999999999998862 2 12345677763 3443433333346789999999
Q ss_pred EEeecCCCCCC-eeEEEECCEE
Q psy1826 99 CVIKHSPEPPP-AIYWLHNTEV 119 (169)
Q Consensus 99 C~~~~~p~p~~-~i~W~~~~~~ 119 (169)
|.+.+. .|.| .++|++++..
T Consensus 147 C~~~g~-~P~p~~v~W~~~~~~ 167 (220)
T 1pz5_B 147 CLVKGY-FPEPVTVKWNYGALS 167 (220)
T ss_dssp EEEEEE-BSSCCEEEEGGGTCC
T ss_pred EEEEEE-eCCCeEEEEecCCcc
Confidence 999986 2556 9999998764
No 67
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.47 E-value=3.9e-13 Score=94.79 Aligned_cols=79 Identities=13% Similarity=0.174 Sum_probs=57.1
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCce--EEEEEEEec--cceeeecCC-cEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIG--ISMYLSVVE--PITQIIGGP-DMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~--~~~~l~v~~--~p~~~~~~~-~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.|.|.+++.+|+|.|.|.+.+.+... ..+.|.|.. +|.+...+. .+.+.+|+.+.|.|.+.+.|.|++.+.|+++
T Consensus 65 ~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~ 144 (213)
T 2x1w_L 65 GFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYP 144 (213)
T ss_dssp EEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECS
T ss_pred cEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEec
Confidence 79999999999999999998862222 225566643 333344443 4589999999999999987655678999998
Q ss_pred CEEe
Q psy1826 117 TEVS 120 (169)
Q Consensus 117 ~~~~ 120 (169)
+..+
T Consensus 145 g~~~ 148 (213)
T 2x1w_L 145 SSKH 148 (213)
T ss_dssp CSSC
T ss_pred CCcc
Confidence 8754
No 68
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.47 E-value=1.8e-12 Score=93.70 Aligned_cols=88 Identities=16% Similarity=0.281 Sum_probs=65.9
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C----CceEEEEEEEec----------------cceeeecCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P----PIGISMYLSVVE----------------PITQIIGGP 85 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~----~~~~~~~l~v~~----------------~p~~~~~~~ 85 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. . .....+.|.|.. ++.+...+.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~ 146 (256)
T 3umt_A 67 KGKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPS 146 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECS
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCC
Confidence 4688865543345678999999999999999999875 1 123345677764 445455566
Q ss_pred cEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 86 DMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 86 ~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
...+.+|+.+.|.|.+.+.| .+.+.|+++
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~--~~~v~W~k~ 175 (256)
T 3umt_A 147 SLSASLGERVSITCRASQDI--GSNLNWLQQ 175 (256)
T ss_dssp EEEECTTCCEEEEEEESSCC--TTCEEEEEE
T ss_pred eEEEECCCCEEEEEEEecCC--CcEEEEEEE
Confidence 78899999999999999864 459999983
No 69
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.47 E-value=2e-13 Score=97.15 Aligned_cols=93 Identities=23% Similarity=0.344 Sum_probs=65.4
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-----C---ceEEEEEEEec----cceeeecCCcEEEcCCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-----P---IGISMYLSVVE----PITQIIGGPDMYINKGS 93 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-----~---~~~~~~l~v~~----~p~~~~~~~~~~v~~g~ 93 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + . ....+.|.|.. +|.+....+...+.+|+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~ 144 (225)
T 1op3_H 65 KGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGG 144 (225)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCC
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCC
Confidence 4688865543345679999999999999999999886 2 1 12345777764 24333322222356899
Q ss_pred cEEEEEEeecCCCCCC-eeEEEECCEEe
Q psy1826 94 TMNLTCVIKHSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 94 ~~~l~C~~~~~p~p~~-~i~W~~~~~~~ 120 (169)
.+.|.|.+.+.+ |.| .+.|++++..+
T Consensus 145 ~v~L~C~~~g~~-P~p~~v~W~~~~~~~ 171 (225)
T 1op3_H 145 TAALGCLVKDYF-PEPVTVSWNSGALTS 171 (225)
T ss_dssp EEEEEEEEEEEB-SSCCEEECCTTSCCT
T ss_pred cEEEEEEEEeEE-CCCeEEEEecCCCcC
Confidence 999999999862 444 99999988753
No 70
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.47 E-value=3.3e-13 Score=101.71 Aligned_cols=94 Identities=16% Similarity=0.235 Sum_probs=67.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec----cceeeecCCcEEEcCCCcEEEEEEe
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE----PITQIIGGPDMYINKGSTMNLTCVI 101 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~l~C~~ 101 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. ......+.|.|.. +|.+...++...+.+|+.+.|.|.+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 144 (344)
T 1za6_B 65 KGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 144 (344)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEE
Confidence 4688865543345679999999999999999999885 3333455777762 3444433434446799999999999
Q ss_pred ecCCCCCCeeEEEECCEEe
Q psy1826 102 KHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 102 ~~~p~p~~~i~W~~~~~~~ 120 (169)
.|.+.+++.+.|++++..+
T Consensus 145 ~g~~P~~~~v~W~k~g~~~ 163 (344)
T 1za6_B 145 KDYFPEPVTVSWNSGALTS 163 (344)
T ss_dssp EEEBSSCCCEEETTTTBCT
T ss_pred eeEECCCeEEEEecCCccC
Confidence 9863123799999998764
No 71
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.47 E-value=2.4e-13 Score=94.62 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=62.8
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC-C--CceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEE
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT-P--PIGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYW 113 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~-~--~~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W 113 (169)
...|.|.+++.+|+|.|.|.+.+. + ..+..+.|.|.. +|. +...+...+.+|+.+.|.|.+.+.| +.+.|
T Consensus 57 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~-i~~~~~~~v~~G~~v~L~C~~~~~p---~~~~W 132 (196)
T 2d3v_A 57 KARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPT-LSALPSPVVTSGENVTLQCGSRLRF---DRFIL 132 (196)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCE-EEC-----------CEEEEEESSCC---SEEEE
T ss_pred ccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCe-EEccCCccccCCCcEEEEEEcCCCC---CEEEE
Confidence 348999999999999999999876 2 223456677765 333 3333446788999999999999864 69999
Q ss_pred EECCEEeecccccceeec-ceeeEEEEEEEEeeEEEEeeeceeeEEEeee
Q psy1826 114 LHNTEVSQLNLMQRESES-SSFVKRLVVLLSVSIVELTWKLEATYILAGT 162 (169)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
++++..+........... ......+. +.....+|.+.|.+...
T Consensus 133 ~k~g~~~~~~~~~~~~~~~~~~~~~L~------I~~v~~~D~G~Y~C~a~ 176 (196)
T 2d3v_A 133 TEEGDHKLSWTLDSQLTPSGQFQALFP------VGPVTPSHRWMLRCYGS 176 (196)
T ss_dssp EEC---CCEEEEECEECTTSCEEEEEE------CCCCBTTBCEEEEEEEE
T ss_pred EccCCcccccccccccccCCCceeEEE------eeecCcccCeeEEEEEE
Confidence 999987643211111100 01112222 33456667777777654
No 72
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.46 E-value=1.6e-12 Score=93.83 Aligned_cols=88 Identities=10% Similarity=0.216 Sum_probs=65.9
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEec---------------cceeeecCCcEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVE---------------PITQIIGGPDMYI 89 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~---------------~p~~~~~~~~~~v 89 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. .. ....+.|.|.. ++.+...+....+
T Consensus 66 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v 145 (253)
T 3uzq_A 66 QGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAV 145 (253)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEE
T ss_pred CCcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEE
Confidence 4688866544446778999999999999999999885 22 23455677764 3444445566889
Q ss_pred cCCCcEEEEEEeecCCCCCC----eeEEEEC
Q psy1826 90 NKGSTMNLTCVIKHSPEPPP----AIYWLHN 116 (169)
Q Consensus 90 ~~g~~~~l~C~~~~~p~p~~----~i~W~~~ 116 (169)
.+|+++.|.|.+.+.| .+ .+.|+++
T Consensus 146 ~~G~~v~L~C~~~~~~--~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 146 SLGQRATISCRASENV--DRYGNSFMHWYQQ 174 (253)
T ss_dssp CTTSCEEEEEEESSCC--EETTEECEEEEEE
T ss_pred eCCCCEEEEEEecCcc--ccCCCcEEEEEEE
Confidence 9999999999999853 34 8999984
No 73
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.46 E-value=5.6e-13 Score=94.17 Aligned_cols=93 Identities=22% Similarity=0.268 Sum_probs=65.8
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC----CceEEEEEEEec----cceeeecCCcEEEcCCCcEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP----PIGISMYLSVVE----PITQIIGGPDMYINKGSTMNLT 98 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~----~~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~l~ 98 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .....+.|.|.. +|.+...++...+.+|+.+.|.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 143 (215)
T 1c5d_H 64 KSRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLG 143 (215)
T ss_dssp GGGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEE
T ss_pred cCcEEEEeeCCCceEEEEECCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEE
Confidence 35887654433356799999999999999999998852 233346777763 3443333333335689999999
Q ss_pred EEeecCCCCCC-eeEEEECCEEe
Q psy1826 99 CVIKHSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 99 C~~~~~p~p~~-~i~W~~~~~~~ 120 (169)
|.+.+. .|.| .+.|++++..+
T Consensus 144 C~~~g~-~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 144 CLVKGY-FPEPVTVTWNSGALSS 165 (215)
T ss_dssp EEEEEE-BSSCCEEEEGGGTTCC
T ss_pred EEEeee-EcCCcEEEEccCCccC
Confidence 999986 2455 99999988654
No 74
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.46 E-value=3e-13 Score=96.43 Aligned_cols=93 Identities=19% Similarity=0.265 Sum_probs=63.1
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C---------CceEEEEEEEec----cceeeecCCcEEEcCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P---------PIGISMYLSVVE----PITQIIGGPDMYINKG 92 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~---------~~~~~~~l~v~~----~p~~~~~~~~~~v~~g 92 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + .....+.|.|.. +|.+...++...+.+|
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g 145 (228)
T 3bae_H 66 ESRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTG 145 (228)
T ss_dssp GGGEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CC
T ss_pred CCcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCC
Confidence 3588765443335679999999999999999999875 2 111235777763 3444443444456789
Q ss_pred CcEEEEEEeecCCCCCC-eeEEEECCEEe
Q psy1826 93 STMNLTCVIKHSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 93 ~~~~l~C~~~~~p~p~~-~i~W~~~~~~~ 120 (169)
+.+.|.|.+.+. .|.| .++|++++..+
T Consensus 146 ~~~~l~C~~~g~-~P~p~~v~W~~~~~~~ 173 (228)
T 3bae_H 146 SSVTLGCLVKGY-FPEPVTLTWNSGSLSS 173 (228)
T ss_dssp SEEEEEEEEEEE-BSSCCEEEEGGGTCCT
T ss_pred CCEEEEEEEccE-eCCCEEEEEeeCCccc
Confidence 999999999986 2445 99999987653
No 75
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.46 E-value=9.6e-13 Score=97.29 Aligned_cols=109 Identities=23% Similarity=0.333 Sum_probs=75.6
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec-----
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE----- 76 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~----- 76 (169)
...|.|+|++.. +. ...|+..... .+...|.|.++..+|+|.|.|.+.|. +.......+.+..
T Consensus 137 ~~~i~W~~~~~~-~~--------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 205 (317)
T 2y25_A 137 DLKVNWSHNGSA-IR--------YSDRVKTGVT--GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAY 205 (317)
T ss_dssp SCEEEEEESSSB-CC--------CCSSEEEEEC--SSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHH
T ss_pred CcEEEEEECCEE-CC--------CCCCeEEecc--CCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccc
Confidence 357899998742 21 1234443222 23456999999999999999999997 5555555554321
Q ss_pred ---------------cceeeec-CCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 77 ---------------PITQIIG-GPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 77 ---------------~p~~~~~-~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+|.+... +....+.+|+.+.|.|.+.|. |.|.+.|++++.++..+.
T Consensus 206 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~--p~p~i~W~~~g~~~~~~~ 267 (317)
T 2y25_A 206 AEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGD--PPPEVSWLKNEKALASDD 267 (317)
T ss_dssp HHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECS--SCCEEEEEESSSEECCCS
T ss_pred hhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecC--CCCEEEEEECCEeCCCCC
Confidence 2333333 345788999999999999996 456999999999886554
No 76
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.46 E-value=7.6e-13 Score=92.87 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=63.6
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCC-CCCCeeEEEECCE
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSP-EPPPAIYWLHNTE 118 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p-~p~~~i~W~~~~~ 118 (169)
..|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|..........+.+|+.+.|.|.+.+.+ .+.+.++|++++.
T Consensus 54 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~ 133 (202)
T 1vca_A 54 STLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDH 133 (202)
T ss_dssp EEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTE
T ss_pred cEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCe
Confidence 37999999999999999999997 556667788888766432222225678999999999999853 1124799999998
Q ss_pred Eeecc
Q psy1826 119 VSQLN 123 (169)
Q Consensus 119 ~~~~~ 123 (169)
++...
T Consensus 134 ~l~~~ 138 (202)
T 1vca_A 134 LMKSQ 138 (202)
T ss_dssp EEEEE
T ss_pred ECccc
Confidence 87643
No 77
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.46 E-value=8.8e-13 Score=100.42 Aligned_cols=80 Identities=23% Similarity=0.414 Sum_probs=68.6
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceE-EEEEEEeccceeeecCCc-EEEcCCCcEEEEEEeecCCCCCCeeEEEECCE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGI-SMYLSVVEPITQIIGGPD-MYINKGSTMNLTCVIKHSPEPPPAIYWLHNTE 118 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~-~~~l~v~~~p~~~~~~~~-~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~ 118 (169)
.|.|.++..+|+|.|.|.+.|. +.... .+.|.|..+|.+...+.. ..+.+|+.+.|.|.+.|.| .|.+.|+++|.
T Consensus 271 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~v~W~~~g~ 348 (395)
T 1bih_A 271 RLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLP--APNVVWSHNAK 348 (395)
T ss_dssp EEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEES--CCCCEEEETTE
T ss_pred eEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECccc--CCeeEEEECCE
Confidence 7999999999999999999998 55443 788999988887777666 7899999999999999964 56899999999
Q ss_pred Eeecc
Q psy1826 119 VSQLN 123 (169)
Q Consensus 119 ~~~~~ 123 (169)
++..+
T Consensus 349 ~~~~~ 353 (395)
T 1bih_A 349 PLSGG 353 (395)
T ss_dssp ECCSS
T ss_pred ECCCC
Confidence 87643
No 78
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.46 E-value=4.4e-13 Score=96.24 Aligned_cols=96 Identities=23% Similarity=0.282 Sum_probs=66.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc-----C--CCceEEEEEEEec------cceeeec-CCcEEEcCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST-----T--PPIGISMYLSVVE------PITQIIG-GPDMYINKG 92 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~-----~--~~~~~~~~l~v~~------~p~~~~~-~~~~~v~~g 92 (169)
..|+.+... ..+.+.|.|.+++.+|+|.|.|.+.+ . ......+.|.|.. +|.+... +....+.+|
T Consensus 61 ~~R~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g 139 (245)
T 3nfj_J 61 PQNLSASRP-QDRQFILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHT 139 (245)
T ss_dssp CCSSEEEEE-ETTEEEEEESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHH
T ss_pred CCcEEEEec-CCCEEEEEECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCC
Confidence 367775543 24667899999999999999999988 2 1222345667764 3433322 233335569
Q ss_pred CcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 93 STMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 93 ~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
+.+.|.|.+.+.+.|++.+.|+++|.++...
T Consensus 140 ~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 170 (245)
T 3nfj_J 140 QKATLVCLATGFFPDHVELSWWVNGKEVHSG 170 (245)
T ss_dssp SEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred CceEEEEEEccCcCCCEEEEEEECCEECCCC
Confidence 9999999999964233489999999988654
No 79
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.46 E-value=4.1e-13 Score=96.95 Aligned_cols=119 Identities=21% Similarity=0.260 Sum_probs=75.5
Q ss_pred CcEEEEEEcCcee---EEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEe
Q psy1826 3 LAQISWVRHRDIH---LLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~ 75 (169)
...|.|+|++.+. .+....... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. .. ......|.|.
T Consensus 68 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~ 145 (252)
T 3bkj_L 68 HTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGS--GTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELK 145 (252)
T ss_dssp CBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEEC
T ss_pred CCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEcc--CCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEe
Confidence 4689999965211 111111000 12367775432 35668999999999999999999886 31 2223456665
Q ss_pred c---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 76 E---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 76 ~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
. +|.+...++...+.+|+.+.|.|.+.+.+.+++.++|+++|.++..+
T Consensus 146 ~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 196 (252)
T 3bkj_L 146 RADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 196 (252)
T ss_dssp CCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSS
T ss_pred CCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCC
Confidence 3 34444433333344788999999999864223489999999987644
No 80
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.45 E-value=9.7e-13 Score=93.78 Aligned_cols=93 Identities=18% Similarity=0.233 Sum_probs=61.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEec----cceeeecCCcEEEcCCCcEEEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSVVE----PITQIIGGPDMYINKGSTMNLTCV 100 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~l~C~ 100 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .....+.|.|.. +|.+....+...+.+|+.+.|.|.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~ 144 (227)
T 1mju_H 65 KNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCL 144 (227)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEE
T ss_pred CCcEEEEEeCCCCeEEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEE
Confidence 46888655433467799999999999999999998752 122335677764 344343333345668999999999
Q ss_pred eecCCCCCC-eeEEEECCEEe
Q psy1826 101 IKHSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 101 ~~~~p~p~~-~i~W~~~~~~~ 120 (169)
+.+.. |.+ .+.|++++..+
T Consensus 145 ~~g~~-P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 145 VKGYF-PEPVTLTWNSGSLSS 164 (227)
T ss_dssp EEEEB-SSCCEEEEGGGTBCT
T ss_pred eecEe-CCCeEEEEecCCCcC
Confidence 99862 444 99999988764
No 81
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.45 E-value=3.6e-12 Score=88.91 Aligned_cols=87 Identities=18% Similarity=0.285 Sum_probs=64.4
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEEecc---ceeeecCCcEEEcCCCcEEEEEEee
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSVVEP---ITQIIGGPDMYINKGSTMNLTCVIK 102 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v~~~---p~~~~~~~~~~v~~g~~~~l~C~~~ 102 (169)
.|+.+ ..++ .|.|.+++.+|+|.|.|.+.+. ......+.|.|..+ |.+...... +.+|+.+.|.|.+.
T Consensus 63 ~r~~~-~~~~----~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~ 135 (208)
T 3r4d_A 63 GREII-YSNG----SLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSN 135 (208)
T ss_dssp SSEEE-CTTS----CEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECS
T ss_pred ceeEE-ecCC----eEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECC
Confidence 46663 3444 7999999999999999999887 23445566777654 333333333 88999999999998
Q ss_pred cCCCCCCeeEEEECCEEeeccc
Q psy1826 103 HSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 103 ~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+. | |.+.|++++.++..+.
T Consensus 136 ~~--p-p~i~W~~~g~~l~~~~ 154 (208)
T 3r4d_A 136 DI--G-ANIQWLFNSQSLQLTE 154 (208)
T ss_dssp CT--T-CEEEEEETTEECCCCS
T ss_pred CC--C-CceEEEECCEeCCCCC
Confidence 84 3 5999999999887554
No 82
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.45 E-value=2.7e-13 Score=97.43 Aligned_cols=80 Identities=21% Similarity=0.189 Sum_probs=57.2
Q ss_pred CeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCC-eeEEEEC
Q psy1826 39 EDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPP-AIYWLHN 116 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~-~i~W~~~ 116 (169)
+.++|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.+...+. ..+..|+.+.|.|.+.+. .|.| .+.|+++
T Consensus 80 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~-~~~~~~~~~~L~C~~~g~-~P~pi~v~W~k~ 157 (248)
T 3pv7_A 80 GDASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD-QVGMKENEDKYMCESSGF-YPEAINITWEKQ 157 (248)
T ss_dssp TBCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEE-BSSCCEEEEEEE
T ss_pred CcEEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC-CccccCCCcEEEEEEccE-ECCCeEEEEEEC
Confidence 3447999999999999999999887 5556677888888877555444 334567788899999984 2456 9999999
Q ss_pred CEEe
Q psy1826 117 TEVS 120 (169)
Q Consensus 117 ~~~~ 120 (169)
+.++
T Consensus 158 g~~l 161 (248)
T 3pv7_A 158 TQKF 161 (248)
T ss_dssp CSSS
T ss_pred CccC
Confidence 8643
No 83
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.45 E-value=5.7e-13 Score=95.57 Aligned_cols=94 Identities=22% Similarity=0.312 Sum_probs=67.1
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-----CCceEEEEEEEec------cceee-ecCCcEEEcCCCcE
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-----PPIGISMYLSVVE------PITQI-IGGPDMYINKGSTM 95 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-----~~~~~~~~l~v~~------~p~~~-~~~~~~~v~~g~~~ 95 (169)
.|+.+... ..+.+.|.|.+++.+|+|.|.|.+.+. ......+.|.|.. +|.+. ..+....+.+|+.+
T Consensus 64 ~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v 142 (245)
T 4ei6_B 64 DQFSVERP-DGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKA 142 (245)
T ss_dssp TTEEEECC-TTSCEEEEECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEE
T ss_pred CCEEEEec-cCceEEEEECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCce
Confidence 78885543 346779999999999999999999852 2223345666663 34333 23334456679999
Q ss_pred EEEEEeecCCCCCC-eeEEEECCEEeecc
Q psy1826 96 NLTCVIKHSPEPPP-AIYWLHNTEVSQLN 123 (169)
Q Consensus 96 ~l~C~~~~~p~p~~-~i~W~~~~~~~~~~ 123 (169)
.|.|.+.+.+ |++ .+.|+++|.++...
T Consensus 143 ~l~C~~~g~~-p~~~~v~W~~~g~~l~~~ 170 (245)
T 4ei6_B 143 TLVCLATGFY-PDHVELSWWVNGKEVHSG 170 (245)
T ss_dssp EEEEEEEEEB-SSCEEEEEEETTEEECTT
T ss_pred EEEEEEeeEe-CCCeEEEEEECCEECCCC
Confidence 9999999864 444 89999999988654
No 84
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.45 E-value=3.5e-12 Score=93.72 Aligned_cols=90 Identities=16% Similarity=0.212 Sum_probs=64.8
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C---C--ceEEEEEEEeccc---------------eeeecCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P---P--IGISMYLSVVEPI---------------TQIIGGP 85 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~---~--~~~~~~l~v~~~p---------------~~~~~~~ 85 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + . ....+.|.|..+| .+...+.
T Consensus 91 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~ 170 (282)
T 1qok_A 91 QGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPA 170 (282)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECS
T ss_pred cCcEEEEEecCCCeEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCC
Confidence 3688765433335678999999999999999999886 3 1 1233467776542 2333455
Q ss_pred cEEEcCCCcEEEEEEeecCCCCCCeeEEEE--CCEE
Q psy1826 86 DMYINKGSTMNLTCVIKHSPEPPPAIYWLH--NTEV 119 (169)
Q Consensus 86 ~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~--~~~~ 119 (169)
.+.+.+|+.+.|.|.+.+.| +.+.|++ ++..
T Consensus 171 ~~~v~~G~~v~L~C~~~~~~---~~v~W~k~~~g~~ 203 (282)
T 1qok_A 171 IMSASPGEKVTITCSASSSV---SYMHWFQQKPGTS 203 (282)
T ss_dssp EEEECTTCCEEEEEEESSCC---SCCEEEEECTTSC
T ss_pred EEEEcCCCcEEEEEEecCCC---ceEEEEEECCCCC
Confidence 67899999999999999864 5999998 5543
No 85
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.45 E-value=2.6e-13 Score=94.54 Aligned_cols=113 Identities=19% Similarity=0.279 Sum_probs=78.8
Q ss_pred CcEEEEEEcCceeEEEEc--cee--ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C--CceEEEEEEEe
Q psy1826 3 LAQISWVRHRDIHLLTVS--GYT--YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P--PIGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~--~~~--~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~--~~~~~~~l~v~ 75 (169)
...|.|+|++.. ..... ... .....|+.. .. . .|.|.+++.+|+|.|.|.+.+. + .....+.|.|.
T Consensus 33 ~~~v~W~~~~~~-~~~~~~~~~~~~~~~~~r~~~-~~-~----~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~ 105 (209)
T 1nbq_A 33 SPRVEWKFDQGD-TTRLVCYNNKITASYEDRVTF-LP-T----GITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL 105 (209)
T ss_dssp SEEEEEEEEETT-EEEESEETTEECTTTTTTCEE-ET-T----EEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEE
T ss_pred CcEEEEEEcCCc-eeEEEEecCccCccccCceEe-ec-c----EEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEe
Confidence 357899997642 11110 000 112356663 22 4 8999999999999999999986 3 23445677787
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEe-ecCCCCCCeeEEEECCEEeeccc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVI-KHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+|.+........+.+|+.+.|.|.+ .+. |.|.+.|++++.++....
T Consensus 106 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~--p~~~v~W~~~~~~~~~~~ 153 (209)
T 1nbq_A 106 VPPSKPTVNIPSSATIGNRAVLTCSEQDGS--PPSEYTWFKDGIVMPTNP 153 (209)
T ss_dssp BCCCCCCCCCBSEEETTSCEEECCCCCSCB--SCCEEEEEETTCCCCSCS
T ss_pred cCCcCCCcccccceecCCEEEEEEeCCCCC--CCceeEEEECCeeCCCcc
Confidence 77765555555678899999999997 675 556999999998876643
No 86
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.45 E-value=1.7e-12 Score=90.57 Aligned_cols=83 Identities=25% Similarity=0.463 Sum_probs=59.5
Q ss_pred CeEEEEEcCCCCCCCeEEEEEEEcC-C-CceEEEEEEEeccce-eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 39 EDWTLQIKYPQKRDSGIYECQVSTT-P-PIGISMYLSVVEPIT-QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G~Y~C~~~~~-~-~~~~~~~l~v~~~p~-~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
..+.|.|.+++.+|+|.|.|.+.+. . .......+.+..++. .........+..+..+.+.|.+.+. |+|.++|++
T Consensus 77 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~--p~p~i~W~~ 154 (218)
T 4frw_A 77 LDGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGS--PAPSVTWDT 154 (218)
T ss_dssp TBCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEB--SCCEEEEEE
T ss_pred CeEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCC--cCceEEEEE
Confidence 3457999999999999999999876 2 222233334443332 2333456777889999999999996 457999999
Q ss_pred CCEEeecc
Q psy1826 116 NTEVSQLN 123 (169)
Q Consensus 116 ~~~~~~~~ 123 (169)
++..+...
T Consensus 155 ~~~~~~~~ 162 (218)
T 4frw_A 155 EVKGTTSS 162 (218)
T ss_dssp SSCCEEEE
T ss_pred CCcccccC
Confidence 98776543
No 87
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.45 E-value=3.1e-12 Score=91.21 Aligned_cols=109 Identities=20% Similarity=0.268 Sum_probs=74.8
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc----c
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP----I 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~----p 78 (169)
..|.|+|++. .+.... ............ .|.|.+++..|+|.|.|.+.+. +.....+.+.|... |
T Consensus 45 ~~v~W~~~~~--~~~~~~----~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~ 114 (241)
T 3grw_A 45 PSISWLKNGR--EFRGEH----RIGGIKLRHQQW----SLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRP 114 (241)
T ss_dssp CEEEEEETTE--ECCGGG----STTCCEEEGGGT----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCC
T ss_pred ceeEEEECCc--ccCCCC----cccceeeeccce----EEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccCCCCc
Confidence 4789999874 211110 001122223333 8999999999999999999987 55556677777642 2
Q ss_pred eeee-cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE----CCEEeeccc
Q psy1826 79 TQII-GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH----NTEVSQLNL 124 (169)
Q Consensus 79 ~~~~-~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~----~~~~~~~~~ 124 (169)
.+.. .+....+.+|+.+.|.|.+.+.| .|.+.|++ ++..+..+.
T Consensus 115 ~~~~~~~~~~~~~~g~~v~L~C~~~~~p--~p~v~W~~~~~~~g~~~~~~~ 163 (241)
T 3grw_A 115 ILQAGLPANQTAVLGSDVEFHCKVYSDA--QPHIQWLKHVEVNGSKVGPDG 163 (241)
T ss_dssp EEEECTTCSEECCTTCCEEEEEEEECSS--CCEEEEEEECCSSSCSSCTTT
T ss_pred eeecCCCccceecCCCEEEEEEEEecCC--CCEEEEEEcccCCCcccCCCC
Confidence 3232 34567889999999999999964 56999999 777765544
No 88
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.45 E-value=1.6e-12 Score=88.86 Aligned_cols=78 Identities=18% Similarity=0.270 Sum_probs=61.4
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
.|.|.+++.+|+|.|.|.+.+. ..+..+.|.|..++..+. .+...+.+|+.+.|.|.+.+.| |++.+.|+++|.++.
T Consensus 55 ~L~i~~~~~~d~G~Y~C~~~n~-~~s~~~~l~V~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~-~~~~~~W~k~g~~~~ 131 (175)
T 1fnl_A 55 SYFIDAATVNDSGEYRCQTNLS-TLSDPVQLEVHIGWLLLQ-APRWVFKEEDPIHLRCHSWKNT-ALHKVTYLQNGKDRK 131 (175)
T ss_dssp EEEESSCCGGGCEEEEEECSSS-CCCCCEEEEEECSSEEEE-CSCSEEETTCCEEEEEEECTTC-CCEEEEEEETTEEEE
T ss_pred EEEEeCCCcccCEEEEEEeeCC-cccccEEEEEeCCCceee-CCCceecCCCCEEEEEEcCCCC-CceEEEEEECCeEcc
Confidence 8999999999999999999885 224456777775555443 3456788999999999998874 446999999999874
Q ss_pred c
Q psy1826 122 L 122 (169)
Q Consensus 122 ~ 122 (169)
.
T Consensus 132 ~ 132 (175)
T 1fnl_A 132 Y 132 (175)
T ss_dssp E
T ss_pred C
Confidence 3
No 89
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.45 E-value=3.2e-12 Score=91.83 Aligned_cols=112 Identities=21% Similarity=0.310 Sum_probs=73.0
Q ss_pred CcEEEEEEcCceeE---EEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEe
Q psy1826 3 LAQISWVRHRDIHL---LTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~~~---~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~ 75 (169)
...|.|+|+..... +....... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. .. ....+.|.|.
T Consensus 35 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~ 112 (247)
T 1svz_A 35 NTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGS--GTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIK 112 (247)
T ss_dssp CBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccC--CCEEEEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEE
Confidence 46899998642111 11110000 12468775432 35668999999999999999999886 32 2334567776
Q ss_pred ccc-------------eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 76 EPI-------------TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 76 ~~p-------------~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.++ ..+..++...+.+|+.+.|.|.+.+.+.|.+.+.|+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 113 GGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp ---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence 532 23444455669999999999999987534579999985
No 90
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.45 E-value=1.9e-12 Score=93.81 Aligned_cols=90 Identities=17% Similarity=0.207 Sum_probs=65.0
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C------C---ceEEEEEEEeccc---------------eee
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P------P---IGISMYLSVVEPI---------------TQI 81 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~------~---~~~~~~l~v~~~p---------------~~~ 81 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + . ....+.|.|..++ .+.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~ 143 (257)
T 1f3r_B 64 KSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLT 143 (257)
T ss_dssp STTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSC
T ss_pred CCcEEEEEECCCCEEEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEE
Confidence 4688865543346679999999999999999999886 2 1 1133567776542 222
Q ss_pred ecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE--CCE
Q psy1826 82 IGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH--NTE 118 (169)
Q Consensus 82 ~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~--~~~ 118 (169)
..+..+.+.+|+.+.|.|.+.+.| ++.+.|++ ++.
T Consensus 144 ~~p~~~~v~~G~~v~L~C~~~~~~--~~~v~W~k~~~g~ 180 (257)
T 1f3r_B 144 QSPSLLSASVGDRVTLSCKGSQNI--NNYLAWYQQKLGE 180 (257)
T ss_dssp EETSEECCCTTCCEEEEEECSSCC--BTCEEEEEECTTS
T ss_pred ccCCEEEEcCCCCEEEEEEECCcC--CCcEEEEEECCCC
Confidence 334466788999999999998864 46999998 554
No 91
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.45 E-value=4.2e-13 Score=97.66 Aligned_cols=94 Identities=22% Similarity=0.365 Sum_probs=67.4
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC---CCceEEEEEEEec------cceeee-cCCcEEEcCCCcEEE
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT---PPIGISMYLSVVE------PITQII-GGPDMYINKGSTMNL 97 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~---~~~~~~~~l~v~~------~p~~~~-~~~~~~v~~g~~~~l 97 (169)
.|+.+... ..+.+.|.|.+++.+|+|.|.|.+.+. ........|.|.. +|.+.. .+....+.+|+.+.|
T Consensus 88 ~R~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L 166 (268)
T 3pl6_D 88 DRFFAVRP-EGSVSTLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATL 166 (268)
T ss_dssp TTEEEECT-TSSSEEEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEE
T ss_pred CcEEEEec-CCCEEEEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEE
Confidence 78885543 345679999999999999999999873 2233345667764 343332 333445667999999
Q ss_pred EEEeecCCCCCC-eeEEEECCEEeecc
Q psy1826 98 TCVIKHSPEPPP-AIYWLHNTEVSQLN 123 (169)
Q Consensus 98 ~C~~~~~p~p~~-~i~W~~~~~~~~~~ 123 (169)
.|.+.+.+ |++ .++|+++|.++..+
T Consensus 167 ~C~~~g~~-p~~~~v~W~~~g~~l~~~ 192 (268)
T 3pl6_D 167 VCLATGFY-PDHVELSWWVNGKEVHSG 192 (268)
T ss_dssp EEEEEEEB-SSCEEEEEEESSSEECTT
T ss_pred EEEECccc-CCCeEEEEEECCEECCCC
Confidence 99999974 434 89999999888643
No 92
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.45 E-value=1.5e-12 Score=93.57 Aligned_cols=110 Identities=18% Similarity=0.316 Sum_probs=71.8
Q ss_pred EEEEEEcCceeEEE---E-cce-eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEecc
Q psy1826 5 QISWVRHRDIHLLT---V-SGY-TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEP 77 (169)
Q Consensus 5 ~V~W~k~~~~~~~~---~-~~~-~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~ 77 (169)
.|.|+|+....... . ... ......|+..... .+.+.|.|.+++.+|+|.|.|.+.+. +. ......|.|..+
T Consensus 35 ~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 112 (250)
T 3esu_F 35 YLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGS--GTDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRG 112 (250)
T ss_dssp CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred eEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCC--CCEEEEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECC
Confidence 68999864211111 1 010 1112467764332 35678999999999999999999886 22 223346666543
Q ss_pred -------------------ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 78 -------------------ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 78 -------------------p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
+..+..+....+.+|+.+.|.|.+.+.|.+.+.+.|+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 113 GGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQ 170 (250)
T ss_dssp ----------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEE
T ss_pred CCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEE
Confidence 234445667889999999999999986544679999986
No 93
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.45 E-value=8.4e-13 Score=93.63 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=66.0
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCC----ceEEEEEEEec----cceeeecCCcEEEcCCCcEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPP----IGISMYLSVVE----PITQIIGGPDMYINKGSTMNLT 98 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~----~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~l~ 98 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+... ....+.|.|.. +|.+...+ ...+.+|+.+.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~ 143 (220)
T 2fbj_H 65 KDKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIG 143 (220)
T ss_dssp TTTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEE
T ss_pred CCcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEE
Confidence 468886554334567999999999999999999988622 22345777764 23333323 3345789999999
Q ss_pred EEeecC-CCCCCeeEEEECCEEe
Q psy1826 99 CVIKHS-PEPPPAIYWLHNTEVS 120 (169)
Q Consensus 99 C~~~~~-p~p~~~i~W~~~~~~~ 120 (169)
|.+.+. |.+++.+.|++++..+
T Consensus 144 C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 144 CLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp EEEEEEBSCCCEEEEESCCCSSC
T ss_pred EEEEeEECCCcEEEEEecCCEec
Confidence 999986 3213799999998765
No 94
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.44 E-value=6.2e-13 Score=96.30 Aligned_cols=93 Identities=20% Similarity=0.337 Sum_probs=62.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-----CceEEEEEEEe----ccceeeecCCcEEEcCCCcEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-----PIGISMYLSVV----EPITQIIGGPDMYINKGSTMNL 97 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-----~~~~~~~l~v~----~~p~~~~~~~~~~v~~g~~~~l 97 (169)
..|+.+......+.++|.|.+++.+|+|.|.|.+.+.. .....+.|.|. .+|.+...++...+.+|+.+.|
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 144 (253)
T 3liz_H 65 KGRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTL 144 (253)
T ss_dssp TTTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEE
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEE
Confidence 36888665443467789999999999999999998741 12333567775 3444443444455667999999
Q ss_pred EEEeecCCCCCC-eeEEEECCEEe
Q psy1826 98 TCVIKHSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 98 ~C~~~~~p~p~~-~i~W~~~~~~~ 120 (169)
.|.+.+.. |.+ .++|++++..+
T Consensus 145 ~C~~~g~~-P~~~~v~W~~~~~~~ 167 (253)
T 3liz_H 145 GCLVKGYF-PEPVTVTWNSGSLSS 167 (253)
T ss_dssp EEEEEEEB-SSCCEEEEGGGTBCT
T ss_pred EEEEeeEe-CCCeEEEEEeCCeec
Confidence 99999842 444 89999988643
No 95
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.44 E-value=9e-13 Score=91.82 Aligned_cols=107 Identities=17% Similarity=0.152 Sum_probs=70.5
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecC-CCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecccee
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKP-QNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQ 80 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~ 80 (169)
+..|.|+|.+.... . ...|+.+.... ..+...|.|.+++.+|+|.|.|.+.+. +.....+.|.|..++..
T Consensus 36 ~~~v~W~k~~~~~~-~-------~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~ 107 (202)
T 3bp6_B 36 GIRASLQKVENDTS-L-------QSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMR 107 (202)
T ss_dssp TEEEEEEECC--CC-C-------BCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCC
T ss_pred ceEEEEEcCCCccc-c-------cCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEecCCCCc
Confidence 36899999432111 1 12455533211 113458999999999999999999987 44556677777654311
Q ss_pred eecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 81 IIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 81 ~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
.. .....+.+|+.+.|.|.+.|. |.|.+.|++++.++
T Consensus 108 p~-~~~~~~~~g~~v~l~C~~~g~--P~p~v~W~~~~~~~ 144 (202)
T 3bp6_B 108 ID-TRILEVPGTGEVQLTCQARGY--PLAEVSWQNVSVPA 144 (202)
T ss_dssp EE-EEEEECTTTCCEEEEEEEEEB--SCCEEEETTCCSCC
T ss_pred cc-EEEEecCCCCeEEEEEEcccc--CCceEEEEeCCCCc
Confidence 10 011245789999999999986 45799999987654
No 96
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.44 E-value=3.6e-13 Score=96.71 Aligned_cols=95 Identities=20% Similarity=0.263 Sum_probs=66.5
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C----CceEEEEEEEec------cceee-ecCCcEEEcCCCcE
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P----PIGISMYLSVVE------PITQI-IGGPDMYINKGSTM 95 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~----~~~~~~~l~v~~------~p~~~-~~~~~~~v~~g~~~ 95 (169)
.|+.+.... .+.+.|.|.+++.+|+|.|.|.+.+. . .....+.|.|.. +|.+. ..+....+.+|+.+
T Consensus 65 ~r~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v 143 (246)
T 4dzb_B 65 DKFLINHAS-LTLSTLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKA 143 (246)
T ss_dssp GGEEEEEEE-TTEEEEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEE
T ss_pred CcEEEEecC-CCEEEEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcE
Confidence 577754422 35678999999999999999999864 1 122345666663 34333 23344456679999
Q ss_pred EEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 96 NLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 96 ~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.|.|.+.+.|.|+..+.|+++|.++...
T Consensus 144 ~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 171 (246)
T 4dzb_B 144 TLVCLATGFYPDHVELSWWVNGKEVHSG 171 (246)
T ss_dssp EEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred EEEEEEccCcCCceEEEEEECCEECCCC
Confidence 9999999975223399999999988654
No 97
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.44 E-value=1.2e-12 Score=92.64 Aligned_cols=93 Identities=13% Similarity=0.278 Sum_probs=65.0
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC---CceEEEEEEEec----cceee-ecCCcEEEcCCCcEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP---PIGISMYLSVVE----PITQI-IGGPDMYINKGSTMNLT 98 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~---~~~~~~~l~v~~----~p~~~-~~~~~~~v~~g~~~~l~ 98 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .....+.|.|.. +|.+. ..+... .+|+.+.|.
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~ 144 (221)
T 3m8o_H 67 RGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIA 144 (221)
T ss_dssp TTSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEE
T ss_pred cccEEEEecCCCCEEEEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEE
Confidence 47888655443467789999999999999999998752 234445666652 33333 222222 689999999
Q ss_pred EEeec-CCCCCCeeEEEECCEEee
Q psy1826 99 CVIKH-SPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 99 C~~~~-~p~p~~~i~W~~~~~~~~ 121 (169)
|.+.+ .|..++.+.|+++|.++.
T Consensus 145 C~~~~~~P~~~~~v~W~~~g~~~~ 168 (221)
T 3m8o_H 145 CLVQGFFPQEPLSVTWSESGQGVT 168 (221)
T ss_dssp EEEEEEBSSCSEEEEESCCSTTCE
T ss_pred EEEEeeECCCCEEEEEEECCEECc
Confidence 99998 432135999999987664
No 98
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.44 E-value=1.6e-12 Score=89.89 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=72.2
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC---CCceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEE
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT---PPIGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYW 113 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~---~~~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W 113 (169)
...|.|.+++.+|+|.|.|.+.+. ...+..+.|.|.. +|.+... +...+.+|+.+.|.|.+.+. ++.+.|
T Consensus 56 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~-p~~~v~~G~~v~L~C~~~~~---~~~~~w 131 (188)
T 1oll_A 56 KVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVH-PGPEVISGEKVTFYCRLDTA---TSMFLL 131 (188)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEE-SCSEEETTCEEEEEEECSSS---CSEEEE
T ss_pred eeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEEC-CCCccccCCEEEEEEEcCCC---CCEEEE
Confidence 348999999999999999999875 2234456677753 3443333 35568899999999998663 459999
Q ss_pred EECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEeeee
Q psy1826 114 LHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAGTY 163 (169)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (169)
+++|..+.... . .......+. +..+..+|.+.|.+...-
T Consensus 132 ~k~g~~~~~~~--~---~~~~~~~L~------I~~v~~~d~G~Y~C~a~n 170 (188)
T 1oll_A 132 LKEGRSSHVQR--G---YGKVQAEFP------LGPVTTAHRGTYRCFGSY 170 (188)
T ss_dssp EEESSSCEEEE--E---ECSSEEEEE------EEECCGGGCEEEEEECEE
T ss_pred EECCccccccc--c---CCCceeEEE------ECCCCcCCCcEEEEEEEc
Confidence 99987654311 0 011112222 445667788888877543
No 99
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.44 E-value=1.9e-12 Score=95.47 Aligned_cols=140 Identities=16% Similarity=0.143 Sum_probs=88.8
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEec------
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVE------ 76 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~------ 76 (169)
...|.|+|++. .+ ....|+...... +...|.|.+++.+|+|.|.|.+.+.........+.|..
T Consensus 31 ~~~v~W~k~~~--~i-------~~~~~~~~~~~~--~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~v~~~~~~~~ 99 (312)
T 2y23_A 31 KSEFSWSKDYV--ST-------EDSPRLEVESKG--NKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLA 99 (312)
T ss_dssp TCCEEEEETTE--EC-------TTCTTEEEEEET--TEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEECHHHHHHHHH
T ss_pred CcEEEEEECCE--EC-------CCCCCEEEEEeC--CEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEEEEeeeeeeec
Confidence 35789999873 11 123566643322 34589999999999999999999872233344555432
Q ss_pred ------cceeeecCC-cEEEcCCCcEEEEEEee-cCCCCCCeeEEEECCEEeecccccceeecc-eeeEEEEEEEEeeEE
Q psy1826 77 ------PITQIIGGP-DMYINKGSTMNLTCVIK-HSPEPPPAIYWLHNTEVSQLNLMQRESESS-SFVKRLVVLLSVSIV 147 (169)
Q Consensus 77 ------~p~~~~~~~-~~~v~~g~~~~l~C~~~-~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 147 (169)
+|.+...+. ...+.+|+.+.|.|.+. +. |.+.+.|++++.++............ .....+. +.
T Consensus 100 ~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~--p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~------i~ 171 (312)
T 2y23_A 100 LSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLS--GNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMF------ME 171 (312)
T ss_dssp HHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCC--SSCEEEEEETTEEECSSSSCEEEEETTTTEEEEE------ES
T ss_pred ccccCCCCccccccCCceEEeeCCCEEEEEEEEeCC--CCCEEEEEECCEECeeCCcEEEEEccCCCEEEEE------Ec
Confidence 444333333 67889999999999998 64 56799999999998765433222111 1111122 44
Q ss_pred EEeeeceeeEEEee
Q psy1826 148 ELTWKLEATYILAG 161 (169)
Q Consensus 148 ~~~~~~~~~~~~~~ 161 (169)
....+|.+.|.+..
T Consensus 172 ~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 172 KLQDEDEGTYTFQL 185 (312)
T ss_dssp CCCGGGCEEEEEEE
T ss_pred cCCcccCEeEEEEE
Confidence 45556677777743
No 100
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.44 E-value=6.1e-12 Score=94.14 Aligned_cols=102 Identities=24% Similarity=0.388 Sum_probs=74.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC---CCc----eEEEEEEEec
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT---PPI----GISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~---~~~----~~~~~l~v~~ 76 (169)
..|.|+|++. .+.. .+.++... +. .|.|.+++.+|+|.|.|.+.|. +.. ...+.|.|..
T Consensus 159 ~~i~W~k~~~--~l~~------~~~~~~~~--~~----~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~ 224 (329)
T 3oq3_B 159 NNITWYKNNQ--ELII------DGTKYSQS--GQ----NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIP 224 (329)
T ss_dssp CEEEEEETTE--ECCC------SSSSEEEE--TT----EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEEC
T ss_pred ceEEEEECCc--cCCC------CCceEecC--CC----EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEEC
Confidence 5799999874 2211 22455532 44 8999999999999999999973 122 2236677776
Q ss_pred cc----eeeecCCcEEEcCCCcEEEEEEeecCCC-CCC-eeEEEECCEEe
Q psy1826 77 PI----TQIIGGPDMYINKGSTMNLTCVIKHSPE-PPP-AIYWLHNTEVS 120 (169)
Q Consensus 77 ~p----~~~~~~~~~~v~~g~~~~l~C~~~~~p~-p~~-~i~W~~~~~~~ 120 (169)
+| .++ .+....+.+|+.+.|.|.+.+.|. ++| .+.|++++.++
T Consensus 225 ~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i 273 (329)
T 3oq3_B 225 SQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWI 273 (329)
T ss_dssp CCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCB
T ss_pred CCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeee
Confidence 66 444 566788999999999999999751 245 88999999875
No 101
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.44 E-value=2.1e-12 Score=89.75 Aligned_cols=113 Identities=13% Similarity=0.144 Sum_probs=72.3
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC-C--CceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEE
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT-P--PIGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYW 113 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~-~--~~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W 113 (169)
...|.|.+++.+|+|.|.|.+.|. + ..+..+.|.|.. +|.+... +...+.+|+.+.|.|.+.+. ++.+.|
T Consensus 57 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~-~~~~v~~G~~v~L~C~~~~~---~~~~~w 132 (196)
T 3p2t_A 57 KARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSAL-PSPLVTSGKSVTLLCQSRSP---MDTFLL 132 (196)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEE-SCSEECTTCCEEEEEEEEEE---EEEEEE
T ss_pred eEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeC-CcceecCCCeEEEEEecCCC---CCEEEE
Confidence 348999999999999999999987 3 334556677753 3333333 33467899999999999873 358999
Q ss_pred EECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEeee
Q psy1826 114 LHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAGT 162 (169)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
++++..+.................+. +.....+|.+.|.+...
T Consensus 133 ~k~g~~~~~~~~~~~~~~~~~~~~L~------i~~v~~~d~G~Y~C~a~ 175 (196)
T 3p2t_A 133 CKERAAHPLLCLRSEHGAQQHQAEFP------MSPVTSVHGGTYRCFSS 175 (196)
T ss_dssp EETTCCCGGGSEEEEEEEEEEEEEEE------ECSCCGGGCEEEEEEEE
T ss_pred EeCCCcccceeecccccccCcceEEE------eCCCcccCCCeEEEEEE
Confidence 99998765432111110001111111 33456667777777654
No 102
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.43 E-value=3.9e-12 Score=100.66 Aligned_cols=118 Identities=15% Similarity=0.170 Sum_probs=77.9
Q ss_pred cEEEEEEcCceeEEE---Ecc--eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C---CceEEEEEEE
Q psy1826 4 AQISWVRHRDIHLLT---VSG--YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P---PIGISMYLSV 74 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~---~~~--~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~---~~~~~~~l~v 74 (169)
..|.|+|++.+..+. ... .......|+... .. .....|.|.+++.+|+|.|.|.+.+. + .....+.|.|
T Consensus 30 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~-~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V 107 (523)
T 2rcj_C 30 ITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGS-KS-GTSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTV 107 (523)
T ss_pred ceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEe-cC-CCEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEe
Confidence 579999975211111 100 000123576632 22 24568999999999999999999986 3 2334567777
Q ss_pred e----ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 75 V----EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 75 ~----~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
. .+|.+...+....+.+|+.+.|.|.+.+.|.|++.++|+++|.++..+
T Consensus 108 ~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 160 (523)
T 2rcj_C 108 LGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAG 160 (523)
T ss_pred ccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCc
Confidence 3 455555555556667899999999999975333599999999887543
No 103
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.43 E-value=1.2e-12 Score=96.82 Aligned_cols=83 Identities=22% Similarity=0.249 Sum_probs=60.7
Q ss_pred CeEEEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEEecccee--eecCCcEEEcCCCcEEEEEEee-cCCCCCCeeEE
Q psy1826 39 EDWTLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSVVEPITQ--IIGGPDMYINKGSTMNLTCVIK-HSPEPPPAIYW 113 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v~~~p~~--~~~~~~~~v~~g~~~~l~C~~~-~~p~p~~~i~W 113 (169)
+...|.|.+++.+|+|.|.|.+.+. +.....+.+.+...|.. +..+.......|+.+.|.|.+. +. |.|.++|
T Consensus 72 ~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~--P~~~i~W 149 (308)
T 4fom_A 72 NDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGK--PVAHIDW 149 (308)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEB--SCCEEEE
T ss_pred CceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCc--CCceEEE
Confidence 4458999999999999999999886 33445556666655432 3334455566788999999864 54 5679999
Q ss_pred EECCEEeecc
Q psy1826 114 LHNTEVSQLN 123 (169)
Q Consensus 114 ~~~~~~~~~~ 123 (169)
++++.++...
T Consensus 150 ~~~~~~~~~~ 159 (308)
T 4fom_A 150 EGDLGEMEST 159 (308)
T ss_dssp CCCSSBCCEE
T ss_pred EECCcccccc
Confidence 9998876543
No 104
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.43 E-value=1.3e-12 Score=95.50 Aligned_cols=107 Identities=23% Similarity=0.321 Sum_probs=76.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC--ceEEEEEEEecccee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP--IGISMYLSVVEPITQ 80 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~--~~~~~~l~v~~~p~~ 80 (169)
..|.|+|++..... ..+.|+. ...++ .|.|.++..+|+|.|.|.+.+. .. ....+.+.|..+|.+
T Consensus 130 ~~v~W~~~~~~~~~-------~~~~~~~-~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~ 197 (291)
T 1qz1_A 130 PTIIWKHKGRDVIL-------KKDVRFI-VLSNN----YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTV 197 (291)
T ss_dssp CEEEEEETTSCSST-------TCCTTEE-ECTTS----CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEE
T ss_pred CEEEEEECCEEccc-------CCCceEE-EccCC----cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcc
Confidence 46899998742111 1224554 33344 7999999999999999999885 22 234566777777766
Q ss_pred eecCC--cEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 81 IIGGP--DMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 81 ~~~~~--~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
..... ...+.+|+.+.|.|.+.+.| .|.+.|++++.++....
T Consensus 198 ~~~~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~g~~~~~~~ 241 (291)
T 1qz1_A 198 QARQSIVNATANLGQSVTLVCDADGFP--EPTMSWTKDGEPIENEE 241 (291)
T ss_dssp EESCSEEEEETTSCCCEEEEEEEEEES--CCEEEEEETTEECCCC-
T ss_pred cccccccccccccCceEEEEEEEEEeC--CCcEEEEECCEECcCCC
Confidence 55433 45788999999999999964 56999999999887654
No 105
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=1.6e-12 Score=93.49 Aligned_cols=94 Identities=17% Similarity=0.219 Sum_probs=65.8
Q ss_pred CCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--C------ceEEEEEEEecc-------cee-eecCCcEEE
Q psy1826 26 SDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--P------IGISMYLSVVEP-------ITQ-IIGGPDMYI 89 (169)
Q Consensus 26 ~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~------~~~~~~l~v~~~-------p~~-~~~~~~~~v 89 (169)
.+.|+.+....+.+.+.|.|.+++.+|+|.|.|.+.+.. . ....+.|.|... |.. +..+....+
T Consensus 65 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~ 144 (242)
T 1hxm_B 65 PSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAET 144 (242)
T ss_dssp CTTSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGG
T ss_pred cCCeEEEEecCCCcEEEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhc
Confidence 357888655443467799999999999999999998752 1 122457777652 221 222333445
Q ss_pred cCCCcEEEEEEeecCCCC-CCeeEEEECCE-Ee
Q psy1826 90 NKGSTMNLTCVIKHSPEP-PPAIYWLHNTE-VS 120 (169)
Q Consensus 90 ~~g~~~~l~C~~~~~p~p-~~~i~W~~~~~-~~ 120 (169)
.+|+.+.|.|.+.+.. | ++.+.|++++. ++
T Consensus 145 ~~g~~v~L~C~~~g~~-P~~~~v~W~~~~~~~l 176 (242)
T 1hxm_B 145 KLQKAGTYLCLLEKFF-PDVIKIHWEEKKSNTI 176 (242)
T ss_dssp GSSSCEEEEEEEEEES-SCCEEEEEEESSSCCC
T ss_pred ccCCCceEEEEEeeEE-CCCeEEEEEcCCCEee
Confidence 6799999999999862 3 47999999986 45
No 106
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.43 E-value=3.3e-12 Score=92.32 Aligned_cols=89 Identities=21% Similarity=0.326 Sum_probs=63.4
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC----ceEEEEEEEecc--------------ceeeecCCcE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP----IGISMYLSVVEP--------------ITQIIGGPDM 87 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~----~~~~~~l~v~~~--------------p~~~~~~~~~ 87 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. .. ....+.|.|..+ +.+...+...
T Consensus 72 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~ 151 (257)
T 3gkz_A 72 KSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIM 151 (257)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEE
T ss_pred cccEEEEEecCCceEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceE
Confidence 4688765543345678999999999999999999885 11 223456777654 3334445568
Q ss_pred EEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 88 YINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 88 ~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.+.+|+++.|.|.+.+.| +++.+.|+++
T Consensus 152 ~v~~G~~v~L~C~~~~~~-~~~~v~W~k~ 179 (257)
T 3gkz_A 152 SASPGEKVTLTCSASSSV-SSSHLYWYQQ 179 (257)
T ss_dssp EECTTCCEEEEEEESSCC-CGGGEEEEEE
T ss_pred EEeCCCcEEEEEEEccCc-cceEEEEEEE
Confidence 899999999999999853 2239999983
No 107
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.43 E-value=2.1e-11 Score=84.70 Aligned_cols=77 Identities=23% Similarity=0.299 Sum_probs=56.4
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CCc-----eEEEEEEEeccc---eeeecCCcEEEcCCCcEEEEEEee-cCCCCCCe
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PPI-----GISMYLSVVEPI---TQIIGGPDMYINKGSTMNLTCVIK-HSPEPPPA 110 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~~-----~~~~~l~v~~~p---~~~~~~~~~~v~~g~~~~l~C~~~-~~p~p~~~ 110 (169)
..|.|.+++.+|+|.|.|.+.+. +.. ...+.|.|..++ .+.. .....|+.+.|.|.+. +. |.|.
T Consensus 65 ~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~----~~~~~g~~~~l~C~~~~g~--P~p~ 138 (201)
T 1dr9_A 65 LSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD----FEIPTSNIRRIICSTSGGF--PEPH 138 (201)
T ss_dssp TEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEE----EECSSTTEEEEEEEEEEES--SCEE
T ss_pred cEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEe----ccCCCCCeEEEEEecCCcc--CCCE
Confidence 38999999999999999999996 332 345666666542 2111 1224588899999995 75 5569
Q ss_pred eEEEECCEEeecc
Q psy1826 111 IYWLHNTEVSQLN 123 (169)
Q Consensus 111 i~W~~~~~~~~~~ 123 (169)
+.|+++|.++...
T Consensus 139 i~W~k~g~~l~~~ 151 (201)
T 1dr9_A 139 LSWLENGEELNAI 151 (201)
T ss_dssp EEEEESSCEECCS
T ss_pred EEEEECCEECccc
Confidence 9999999887754
No 108
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.43 E-value=3.2e-12 Score=92.31 Aligned_cols=112 Identities=21% Similarity=0.277 Sum_probs=71.6
Q ss_pred CcEEEEEEcCceeE---EEEcce--eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C---CceEEEEEE
Q psy1826 3 LAQISWVRHRDIHL---LTVSGY--TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P---PIGISMYLS 73 (169)
Q Consensus 3 ~~~V~W~k~~~~~~---~~~~~~--~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~---~~~~~~~l~ 73 (169)
...|.|+|+..... +..... ......|+..... ...+.|.|.+++.+|+|.|.|.+.+. + .....+.|.
T Consensus 33 ~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~ 110 (256)
T 3ux9_B 33 SNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKS--GTSASLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLT 110 (256)
T ss_dssp TSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEE--TTEEEEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEE
T ss_pred CceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEcc--CCEEEEEECCCChhhCEEEEEEEEECCCCceEECCCEEEE
Confidence 35789998642111 111000 0112467775432 25678999999999999999999885 2 222345667
Q ss_pred Eeccce--------------------eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 74 VVEPIT--------------------QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 74 v~~~p~--------------------~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
|..++. .+..++...+.+|+.+.|.|.+.+.+.+.+.+.|+++
T Consensus 111 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 111 VLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp EC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEEEEEE
Confidence 765431 2334455668999999999999986533679999985
No 109
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.42 E-value=5.5e-13 Score=93.71 Aligned_cols=81 Identities=15% Similarity=0.157 Sum_probs=56.7
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCce--EEEEE--EEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIG--ISMYL--SVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~--~~~~l--~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.|.|.+++.+|+|.|.|.+.+. +... ..+.+ .+..+|.+...+......+|+.+.|.|.+.|.+.+++.++|++|
T Consensus 69 ~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~ 148 (207)
T 2vol_A 69 ELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESN 148 (207)
T ss_dssp EEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred EEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEEC
Confidence 7999999999999999999987 4322 22222 33455655443332222358999999999986423359999999
Q ss_pred CEEeec
Q psy1826 117 TEVSQL 122 (169)
Q Consensus 117 ~~~~~~ 122 (169)
|.++..
T Consensus 149 g~~l~~ 154 (207)
T 2vol_A 149 GQPAEN 154 (207)
T ss_dssp TEECSC
T ss_pred CEeccC
Confidence 998753
No 110
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.42 E-value=9.8e-12 Score=85.18 Aligned_cols=69 Identities=19% Similarity=0.290 Sum_probs=57.1
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.|.|. +.+|+|.|.|.+.+. ....+.|.|..+|.+...+....+.+|+.+.|.|.+.+.| |+|.+.|++
T Consensus 52 ~l~i~--~~~d~G~Y~C~~~n~--~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p-~~~~i~W~~ 120 (184)
T 3b5h_A 52 EFKVD--SDDQWGEYSCVFLPE--PMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVP-PVTDWAWYK 120 (184)
T ss_dssp EEEEC--GGGCCEEEEEEEEST--TSCEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSS-CCCEEEEEE
T ss_pred EEEEe--chhhCeEEEEEEECC--cCcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCC-CCCeEEEEE
Confidence 56666 689999999999984 3356788888888877777778899999999999999975 367999999
No 111
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.42 E-value=5e-13 Score=93.80 Aligned_cols=95 Identities=20% Similarity=0.231 Sum_probs=66.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-C--ceEEEEEEEe----ccceeeecCCcEEEcCCCcEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-P--IGISMYLSVV----EPITQIIGGPDMYINKGSTMNLT 98 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-~--~~~~~~l~v~----~~p~~~~~~~~~~v~~g~~~~l~ 98 (169)
..|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. . . ......+.|. .+|.+...++...+.+|+.+.|.
T Consensus 57 ~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~ 134 (212)
T 1nfd_E 57 PERFSGSTS--GTTATLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLV 134 (212)
T ss_dssp CTTEEEEEE--TTEEEEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCC
T ss_pred cccEEEEee--CCEEEEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEE
Confidence 467775432 24568999999999999999999962 2 1 1223456663 34554443444445679999999
Q ss_pred EEeecCCCCCCeeEEEECCEEeecc
Q psy1826 99 CVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 99 C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
|.+.+.+.|.+.+.|+++|.++...
T Consensus 135 C~~~g~~p~~~~v~W~k~g~~~~~~ 159 (212)
T 1nfd_E 135 CLVNDFYPGSATVTWKANGATINDG 159 (212)
T ss_dssp EEEEEEBSSCCEEEEEETTEEECSS
T ss_pred EEEEeeECCccEEEEEECCeEcCCC
Confidence 9999873233799999999988654
No 112
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.42 E-value=2.6e-12 Score=88.92 Aligned_cols=106 Identities=23% Similarity=0.326 Sum_probs=72.3
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceE---EEEEEEe----
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGI---SMYLSVV---- 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~---~~~l~v~---- 75 (169)
..|.|+|++...... .+.+......++ .|.|.+++.+|+|.|.|.+.+. +.... .+.+.+.
T Consensus 40 ~~v~W~~~~~~~~~~-------~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (201)
T 3s97_C 40 LSYRWLLNEFPVFIT-------MDKRRFVSQTNG----NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERT 108 (201)
T ss_dssp CEEEEEESSTTCBCC-------CSSSEEECTTTC----CEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSS
T ss_pred eEEEEEECCceeeee-------eCCCeEEEcCCC----eEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccc
Confidence 689999987422111 122333233334 7999999999999999999885 32221 2333332
Q ss_pred ---ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 76 ---EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 76 ---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
.+|.+........+.+|+.+.|.|.+.+. |.|.+.|++++..+..
T Consensus 109 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~v~W~~~~~~~~~ 156 (201)
T 3s97_C 109 TKPYPADIVVQFKDVYALMGQNVTLECFALGN--PVPDIRWRKVLEPMPS 156 (201)
T ss_dssp CCCEEEEEEEECCCEEEETTCCEEEEEEEEEE--SCCEEEEEETTBCCCT
T ss_pred cCCCCCceEecCCceEEecCCcEEEEEEccCC--CCCceEEEeCCCcCCC
Confidence 23444555557888999999999999986 4569999999986653
No 113
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.42 E-value=6.7e-12 Score=89.50 Aligned_cols=88 Identities=17% Similarity=0.328 Sum_probs=62.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-----ceEEEEEEEeccc------------eeeecCCcEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-----IGISMYLSVVEPI------------TQIIGGPDMY 88 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-----~~~~~~l~v~~~p------------~~~~~~~~~~ 88 (169)
..|+.+.. .....+.|.|.+++.+|+|.|.|.+.+. +. ......|.|...+ .+...+..+.
T Consensus 60 ~~r~~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~ 138 (238)
T 2p1y_A 60 PDGYKASR-PSQENFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLT 138 (238)
T ss_dssp CTTCEEEC-CSSSBCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEE
T ss_pred cceEEEEc-cCCceEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEE
Confidence 45777543 2234558999999999999999999886 21 1123466665443 3344466778
Q ss_pred EcCCCcEEEEEEeecCCCCCCeeEEEECC
Q psy1826 89 INKGSTMNLTCVIKHSPEPPPAIYWLHNT 117 (169)
Q Consensus 89 v~~g~~~~l~C~~~~~p~p~~~i~W~~~~ 117 (169)
+.+|+.+.|.|.+.+.| .|.+.|++++
T Consensus 139 v~~G~~v~L~C~~~~~p--~~~i~W~k~~ 165 (238)
T 2p1y_A 139 VWEGETAILNCSYENSA--FDYFPWYQQF 165 (238)
T ss_dssp EETTSCEEEEEECCCTT--CCEEEEEEEC
T ss_pred EeCCCeEEEEEEEecCC--CCcEEEEEEC
Confidence 99999999999999864 5699999853
No 114
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.42 E-value=1.2e-12 Score=101.73 Aligned_cols=79 Identities=16% Similarity=0.186 Sum_probs=66.2
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecC--CcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGG--PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEV 119 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~ 119 (169)
.|.|.+++.+|+|.|.|.|.|. ....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.| .|.++|+++|.+
T Consensus 291 ~L~I~~v~~~D~G~Y~C~A~N~--~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P--~p~i~W~k~g~~ 366 (423)
T 3qs7_E 291 FAFVSSVARNDTGYYTCSSSKH--PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYP--QIRCTWTFSRKS 366 (423)
T ss_dssp EEEESSCCTTTCEEEEEEETTE--EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEES--CCEEEEEETTEE
T ss_pred EEEEeecCHHHCEEEEEEEecC--CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcC--CCeEEEEECCEE
Confidence 7999999999999999999986 6677888888887765544 356788999999999999975 569999999999
Q ss_pred eeccc
Q psy1826 120 SQLNL 124 (169)
Q Consensus 120 ~~~~~ 124 (169)
+....
T Consensus 367 l~~~~ 371 (423)
T 3qs7_E 367 FPCEQ 371 (423)
T ss_dssp EECBC
T ss_pred CCCcc
Confidence 86543
No 115
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.42 E-value=4.3e-12 Score=93.95 Aligned_cols=105 Identities=18% Similarity=0.311 Sum_probs=72.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEE-cC-CCc---eEEEEEEEe---
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVS-TT-PPI---GISMYLSVV--- 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~-~~-~~~---~~~~~l~v~--- 75 (169)
..|.|+|++. .+.. .+.++. ...+ .|.|.+++.+|+|.|.|.+. +. +.. ...+.+.+.
T Consensus 139 ~~i~W~k~~~--~l~~------~~~~~~--~~~~----~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~ 204 (315)
T 1itb_B 139 PKLQWYKDCK--PLLL------DNIHFS--GVKD----RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 204 (315)
T ss_dssp CCCEEEETTE--ECCC------CSSSEE--EETT----EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCC
T ss_pred CEEEEEECCE--ECCC------ccceEe--ecCc----eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCC
Confidence 4689999874 2211 112333 2344 89999999999999999998 54 432 233344343
Q ss_pred --ccceeeecCCc-EEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 76 --EPITQIIGGPD-MYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 76 --~~p~~~~~~~~-~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+|.+...+.. ..+.+|+.+.|.|.+.|. |.|.+.|+++|.++....
T Consensus 205 ~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~--P~p~i~W~~~g~~i~~~~ 254 (315)
T 1itb_B 205 KPTRPVIVSPANETMEVDLGSQIQLICNVTGQ--LSDIAYWKWNGSVIDEDD 254 (315)
T ss_dssp CCCCCEECSCCSEEEECCSSSCEEEEEEEEEC--TTSEEEEEETTEECCTTC
T ss_pred CCCCCEEecCCCCcEEEeCCCcEEEEEEEecC--CCCeeEEEECCEECCccc
Confidence 34554443333 578999999999999996 456999999999987654
No 116
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.42 E-value=1.6e-11 Score=85.69 Aligned_cols=77 Identities=13% Similarity=0.140 Sum_probs=57.0
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-C-----CceEEEEEEEecc---ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-P-----PIGISMYLSVVEP---ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIY 112 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~-----~~~~~~~l~v~~~---p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~ 112 (169)
.|.|.+++.+|+|.|.|.+.+. . ..+..+.|.|... |.+...+. ..+.+|+.+.|.|.+.+ +++.+.
T Consensus 64 ~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~---~~~~~~ 139 (201)
T 1nkr_A 64 NFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS---SYDMYH 139 (201)
T ss_dssp EEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS---CCSEEE
T ss_pred EEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC---CCceEE
Confidence 8999999999999999999763 1 2234556777642 34333333 57889999999999876 346999
Q ss_pred EEECCEEeec
Q psy1826 113 WLHNTEVSQL 122 (169)
Q Consensus 113 W~~~~~~~~~ 122 (169)
|+++|..+..
T Consensus 140 w~k~g~~~~~ 149 (201)
T 1nkr_A 140 LSREGEAHER 149 (201)
T ss_dssp EEETTCSSCE
T ss_pred EEECCcccCc
Confidence 9999876643
No 117
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.41 E-value=2.3e-12 Score=92.17 Aligned_cols=95 Identities=20% Similarity=0.280 Sum_probs=66.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc--C--CCceEEEEEEEec------cceeee-cCCcEEEcCCCcE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST--T--PPIGISMYLSVVE------PITQII-GGPDMYINKGSTM 95 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~--~--~~~~~~~~l~v~~------~p~~~~-~~~~~~v~~g~~~ 95 (169)
..|+.+... ..+.+.|.|.+++.+|+|.|.|.+.+ . ........|.|.. +|.+.. .+....+.+|+.+
T Consensus 62 ~~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v 140 (240)
T 3q5y_A 62 PSRFSVQQF-DDYHSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKA 140 (240)
T ss_dssp CTTEEEEEC-TTSCEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEE
T ss_pred CCeEEEEeC-CCCEEEEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCce
Confidence 368885543 34677999999999999999999973 2 2223344666652 333332 2334455678999
Q ss_pred EEEEEeecCCCCCC-eeEEEECCEEeecc
Q psy1826 96 NLTCVIKHSPEPPP-AIYWLHNTEVSQLN 123 (169)
Q Consensus 96 ~l~C~~~~~p~p~~-~i~W~~~~~~~~~~ 123 (169)
.|.|.+.+.+ |++ .+.|+++|.++...
T Consensus 141 ~L~C~~~g~~-P~~~~v~W~~~g~~l~~~ 168 (240)
T 3q5y_A 141 TLVCLARGFF-PDHVELSWWVNGKEVHSG 168 (240)
T ss_dssp EEEEEEEEEB-SSCEEEEEEETTEEECTT
T ss_pred EEEEEEeeEE-CCCeEEEEEECCEECcCc
Confidence 9999999853 444 89999999988653
No 118
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.41 E-value=2e-12 Score=94.53 Aligned_cols=106 Identities=23% Similarity=0.390 Sum_probs=74.5
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCc-eEEEEEEEeccceeee
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPI-GISMYLSVVEPITQII 82 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~-~~~~~l~v~~~p~~~~ 82 (169)
.|.|+|.++..+. ...|+...... ....|.|.++..+|+|.|.|.+.+. +.. ...+.|.|..+|.+..
T Consensus 34 ~v~W~~~~g~~~~--------~~~~~~~~~~~--~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~ 103 (291)
T 2wim_A 34 SIDWYNPQGEKII--------STQRVVVQKEG--VRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFRE 103 (291)
T ss_dssp EEECBCTTCCBCC--------CBTTEEEEEET--TEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCS
T ss_pred ceEEECCCCcCcc--------CCCcEEEecCC--CEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEe
Confidence 6889884322221 22455533221 3448999999999999999999987 443 4566777777777666
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
.+....+.+|+.+.|.|.+.+. |.+.+.|++++..+..
T Consensus 104 ~~~~~~v~~G~~v~l~C~~~~~--p~~~v~W~~~~~~~~~ 141 (291)
T 2wim_A 104 VVSPQEFKQGEDAEVVCRVSSS--PAPAVSWLYHNEEVTT 141 (291)
T ss_dssp CCCSEEEETTSCEEECCCCBCS--SCCEEEEECC----CB
T ss_pred CCCChhhcCCCCEEEEEEEccC--CCCEEEEEECCccccc
Confidence 6667889999999999999986 4569999999887764
No 119
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.41 E-value=3.2e-12 Score=94.33 Aligned_cols=108 Identities=25% Similarity=0.322 Sum_probs=75.2
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceE-EEEEEEe---ccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGI-SMYLSVV---EPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~-~~~l~v~---~~p 78 (169)
..|.|+|++. .+.... ...|+. ....+ .|.|.+++.+|+|.|.|.+.|. +.... ...+.|. .+|
T Consensus 138 ~~v~W~k~~~--~~~~~~----~~~~~~-~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P 206 (304)
T 2yd9_A 138 PEITWFKDFL--PVDPSA----SNGRIK-QLRSG----ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAP 206 (304)
T ss_dssp CEEEEEETTE--ECCGGG----GTTSEE-ECTTS----CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEE
T ss_pred CeEEEEECCE--ECcCCC----CcceEE-eCCCe----EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCC
Confidence 4789999863 221110 113444 23344 8999999999999999999987 32221 1344443 455
Q ss_pred eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 79 TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 79 ~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+...+....+.+|+.+.|.|.+.|. |.|.+.|++++.++....
T Consensus 207 ~~~~~~~~~~v~~G~~v~l~C~~~g~--p~p~v~W~~~~~~l~~~~ 250 (304)
T 2yd9_A 207 RFSILPMSHEIMPGGNVNITCVAVGS--PMPYVKWMQGAEDLTPED 250 (304)
T ss_dssp EEEECCCCBCCCTTCCEEEEEEEEEE--SCCEEEEEETTEECSCSS
T ss_pred cEEecCCceEEcCCCeEEEEEEEeee--CCCEEEEEECCEECCCcc
Confidence 65656666778999999999999996 456999999999886553
No 120
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.41 E-value=2.2e-11 Score=89.72 Aligned_cols=138 Identities=12% Similarity=0.129 Sum_probs=83.4
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEe-------
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVV------- 75 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~------- 75 (169)
...|.|+|++. .+. ...|+.+......+...|.|.++..+|+|.|.|.+.+. .......+.+.
T Consensus 137 ~~~v~W~~~~~--~i~-------~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~~~~~~~~~~~ 206 (312)
T 2y23_A 137 NAKVNYIFNEK--EIF-------EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDG-KATNHSTVVLVGDVFKKL 206 (312)
T ss_dssp SCEEEEEETTE--EEC-------SSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESS-SCEEEEEEEECTHHHHHH
T ss_pred CCEEEEEECCE--ECe-------eCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeC-CceEEEEEEEcchhhhhh
Confidence 35789999874 221 22455544332234557999999999999999999764 22233333331
Q ss_pred --------------ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEE
Q psy1826 76 --------------EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVL 141 (169)
Q Consensus 76 --------------~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (169)
.+|.+. .+....+.+|+.+.|.|.+.+.| +++.+.|++++.++..+...... .....+.
T Consensus 207 ~~~~~~~~~~~~~~~~p~~~-~~~~~~v~~G~~~~l~C~~~~~p-~~~~v~W~~~g~~~~~~~~~~~~---~~~~~L~-- 279 (312)
T 2y23_A 207 QKEAEFQRQEWIRKQGPHFV-EYLSWEVTGECNVLLKCKVANIK-KETHIVWYKDEREISVDEKHDFK---DGICTLL-- 279 (312)
T ss_dssp HHHHHHHHHHHHHHHSSEEE-EEEEEEEETTTEEEEEEEEESCC-SSCEEEEEETTEEEEEECCC-------CEEEEE--
T ss_pred cccccccccchhhccCCcee-ecceEEEeCCCEEEEEEEEcCCC-CCCEEEEeeCCEECCCCCcEEEE---CCEEEEE--
Confidence 112222 12236788999999999999974 33499999999998754332221 1112222
Q ss_pred EEeeEEEEeeeceeeEEEee
Q psy1826 142 LSVSIVELTWKLEATYILAG 161 (169)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~ 161 (169)
+.....+|.+.|.+..
T Consensus 280 ----I~~v~~~d~G~Y~C~a 295 (312)
T 2y23_A 280 ----ITEFSKKDAGIYEVIL 295 (312)
T ss_dssp ----ECSCSGGGCEEEEEEE
T ss_pred ----ECcCCHHHCEEEEEEE
Confidence 3345566666666654
No 121
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.41 E-value=2.7e-12 Score=91.85 Aligned_cols=81 Identities=19% Similarity=0.295 Sum_probs=62.2
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC-CCc-----eEEEEEEEecc---ceeeec-CCcEEEcCCCcEEEEEEeecCCCCCC
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT-PPI-----GISMYLSVVEP---ITQIIG-GPDMYINKGSTMNLTCVIKHSPEPPP 109 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~-~~~-----~~~~~l~v~~~---p~~~~~-~~~~~v~~g~~~~l~C~~~~~p~p~~ 109 (169)
...|.|.+++.+|+|.|.|.+.+. ... ...+.|.|..+ |.+... +....+.+|+.+.|.|.+.+.| .|
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p--~p 166 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCA--NA 166 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCT--TC
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCC--CC
Confidence 348999999999999999999987 322 34677887764 232222 3457788999999999999965 45
Q ss_pred eeEEEECCEEeec
Q psy1826 110 AIYWLHNTEVSQL 122 (169)
Q Consensus 110 ~i~W~~~~~~~~~ 122 (169)
.+.|++++.++..
T Consensus 167 ~v~W~k~~~~~~~ 179 (250)
T 2fbo_J 167 NVTWYTGPTFFEN 179 (250)
T ss_dssp EEEEEEEEECSSC
T ss_pred eeEEEeCCCcccc
Confidence 9999999887754
No 122
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.41 E-value=5.6e-12 Score=87.71 Aligned_cols=87 Identities=18% Similarity=0.318 Sum_probs=60.9
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccce--eeecCCcEEEcCCC-cEEEEEEeec
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPIT--QIIGGPDMYINKGS-TMNLTCVIKH 103 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~--~~~~~~~~~v~~g~-~~~l~C~~~~ 103 (169)
.|+.+. .++ +|.|.+++.+|+|.|.|.+.+. +.....+.|.|..++. .+.... ..+..|. .+.|.|.+.+
T Consensus 62 ~R~~~~-~~~----sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~-~~~~~g~~~v~L~C~~~g 135 (193)
T 2if7_A 62 KRLNFT-QSY----SLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS-QLFQNMTCELHLTCSVED 135 (193)
T ss_dssp TTEEEC-TTC----CEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECC-C---CSSEEEEEEEEEES
T ss_pred ccEEEC-CCe----EEEECCCCcccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCc-eeecCCCceEEEEEEEec
Confidence 466643 344 8999999999999999999987 4444567777765532 121112 2233455 7999999998
Q ss_pred CCCCCCeeEEEECCEEee
Q psy1826 104 SPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 104 ~p~p~~~i~W~~~~~~~~ 121 (169)
.+ |.|.+.|+++|.++.
T Consensus 136 ~~-p~p~i~W~~~g~~l~ 152 (193)
T 2if7_A 136 AD-DNVSFRWEALGNTLS 152 (193)
T ss_dssp CC-TTCEEEEEETTEEEE
T ss_pred CC-CceEEEEEeCCEEcC
Confidence 63 567999999998764
No 123
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.41 E-value=3.6e-12 Score=91.55 Aligned_cols=111 Identities=21% Similarity=0.266 Sum_probs=70.9
Q ss_pred cEEEEEEcCce---eEEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEec
Q psy1826 4 AQISWVRHRDI---HLLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~ 76 (169)
..|.|+|+... ..+....... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. .. ....+.|.|..
T Consensus 31 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~ 108 (242)
T 2znx_A 31 NNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGS--GTDFTLSINSVETEDFGMYFCQQSNSXPYTFGGGTKLEITG 108 (242)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred ceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecC--CCEEEEEECCCChHHCEEEEEeEecCCceEECCCEEEEEcC
Confidence 47899986421 1111110000 12468875432 24568999999999999999999886 22 22345677765
Q ss_pred cce-------------eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 77 PIT-------------QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 77 ~p~-------------~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
+|. .+..+....+.+|+.+.|.|.+.+.|.+.+.+.|+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 109 GGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp --------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 442 3333444568999999999999987534579999984
No 124
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.41 E-value=1.3e-12 Score=95.17 Aligned_cols=93 Identities=22% Similarity=0.351 Sum_probs=58.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C----------C---ceEEEEEEEec----cceeeecCCcEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P----------P---IGISMYLSVVE----PITQIIGGPDMY 88 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~----------~---~~~~~~l~v~~----~p~~~~~~~~~~ 88 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + . ....+.|.|.. +|.+....+...
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~ 144 (257)
T 3bn9_D 65 KGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSK 144 (257)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC---
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCccc
Confidence 4788866543346779999999999999999999886 3 1 11235777764 344433333344
Q ss_pred EcCCCcEEEEEEeecCCCCCC-eeEEEECCEEe
Q psy1826 89 INKGSTMNLTCVIKHSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 89 v~~g~~~~l~C~~~~~p~p~~-~i~W~~~~~~~ 120 (169)
+.+|+.+.|.|.+.+.. |.| .++|++++.++
T Consensus 145 ~~~g~~v~L~C~~~g~~-P~pi~v~W~k~g~~~ 176 (257)
T 3bn9_D 145 STSGGTAALGCLVKDYF-PEPVTVSWNSGALTS 176 (257)
T ss_dssp --------CCCEEEEEB-SSCCEEEETTTTCCS
T ss_pred ccCCCcEEEEEEEeeEE-CCCcEEEEeeCCCcC
Confidence 67899999999999862 445 99999998764
No 125
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.41 E-value=1.4e-12 Score=89.07 Aligned_cols=78 Identities=19% Similarity=0.260 Sum_probs=60.1
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
.|.|.+++.+|+|.|.|.+.+. ..+..+.|.|..++..+ ..+...+.+|+.+.|.|.+.+. .|.+.+.|+++|.++.
T Consensus 52 ~L~i~~v~~~d~G~Y~C~~~~~-~~s~~~~l~V~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~p~~~~~W~~~g~~~~ 128 (176)
T 1f2q_A 52 SLNIVNAKFEDSGEYKCQHQQV-NESEPVYLEVFSDWLLL-QASAEVVMEGQPLFLRCHGWRN-WDVYKVIYYKDGEALK 128 (176)
T ss_dssp EEEECSCCGGGCEEEEEECTTS-SCCCCEEEEEECSSEEE-EESCSEEETTSCEEEEEEEGGG-CCEEEEEEEETTEECC
T ss_pred EEEEeccceecCEEEEEEcCCc-cccccEEEEEeCcceee-cCCcceeeCCCCEEEEEEecCC-CCceEEEEEECCEEEe
Confidence 8999999999999999999875 22344567777555433 3344678899999999999654 2557999999999885
Q ss_pred c
Q psy1826 122 L 122 (169)
Q Consensus 122 ~ 122 (169)
.
T Consensus 129 ~ 129 (176)
T 1f2q_A 129 Y 129 (176)
T ss_dssp S
T ss_pred e
Confidence 4
No 126
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.41 E-value=3.7e-12 Score=103.12 Aligned_cols=105 Identities=22% Similarity=0.327 Sum_probs=77.9
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEeccce-
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEPIT- 79 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~p~- 79 (169)
...|.|+|++. .+. ...|+.+...+. .|.|.++..+|+|.|.|.+.|. +. .+..+.|.|..+|.
T Consensus 495 ~~~i~W~~~g~--~l~-------~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~ 561 (642)
T 1e07_A 495 NTTYLWWVNGQ--SLP-------VSPRLQLSNGNR----TLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDT 561 (642)
T ss_pred CcEEEEEECCE--eCC-------CCCcEEEcCCCc----EEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCc
Confidence 35789998874 211 224555333333 8999999999999999999998 54 33457888876553
Q ss_pred eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 80 QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 80 ~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
+...+....+.+|+.+.|.|.+.|. |+|.+.|+++|.++..
T Consensus 562 ~~~~~~~~~v~~g~~~~l~C~~~g~--p~p~v~W~~~g~~i~~ 602 (642)
T 1e07_A 562 PIISPPDSSYLSGANLNLSCHSASN--PSPQYSWRINGIPQQH 602 (642)
T ss_pred ceecCCceeEEcCCcEEEEEEeccC--CCCeEEEEECCEECcc
Confidence 4455667889999999999999996 4569999999998763
No 127
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.40 E-value=4.1e-12 Score=91.03 Aligned_cols=96 Identities=15% Similarity=0.242 Sum_probs=66.9
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC------CceEEEEEEEec------cceeeec-CCcEEEcCCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP------PIGISMYLSVVE------PITQIIG-GPDMYINKGS 93 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~------~~~~~~~l~v~~------~p~~~~~-~~~~~v~~g~ 93 (169)
..|+.+.... .+.+.|.|.+++.+|+|.|.|.+.+.. .....+.|.|.. +|.+... +....+.+|+
T Consensus 59 ~~R~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~ 137 (238)
T 1bec_A 59 PDGYKASRPS-QEQFSLILELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQ 137 (238)
T ss_dssp CTTCEEECCS-SSEEEEEESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSC
T ss_pred cceEEEEecC-CCEEEEEEecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCC
Confidence 4788854322 356799999999999999999998752 112334677764 3433332 3334456899
Q ss_pred cEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 94 TMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 94 ~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+.|.|.+.+.+.+++.+.|+++|.++..+
T Consensus 138 ~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~ 167 (238)
T 1bec_A 138 KATLVCLARGFFPDHVELSWWVNGKEVHSG 167 (238)
T ss_dssp SCSEEEEEEEEBSCCEEEEEEETTEEECTT
T ss_pred ceEEEEEEeeEeCCCcEEEEEECCEECCCc
Confidence 999999999862123599999999987654
No 128
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.40 E-value=4.9e-12 Score=87.18 Aligned_cols=106 Identities=13% Similarity=0.121 Sum_probs=70.0
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-C--CceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-P--PIGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~--~~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.|.|.+++.+|+|.|.|.+.+. + ..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+. ++.+.|++
T Consensus 53 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~---~~~~~w~k 128 (184)
T 2gi7_A 53 VLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYG---FDQFALYK 128 (184)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSC---CCEEEEEE
T ss_pred EEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCC---CcEEEEEE
Confidence 8999999999999999999886 2 233445666643 33433333 4567799999999998663 35999999
Q ss_pred CCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEeee
Q psy1826 116 NTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAGT 162 (169)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
+|..+....... .....+ .+.....+|.+.|.+...
T Consensus 129 ~g~~~~~~~~~~-----~~~~~L------~i~~v~~~D~G~Y~C~a~ 164 (184)
T 2gi7_A 129 EGDPAPYKNPER-----WYRASF------PIITVTAAHSGTYRCYSF 164 (184)
T ss_dssp CCCCTTSCCCCE-----EEEESS------SEEEETTCCSEEEEEEEE
T ss_pred CCCcCcceecCC-----CceEEE------EEccCCccCCeEEEEEEE
Confidence 988765421100 001111 133556677777777654
No 129
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.40 E-value=5.8e-12 Score=88.92 Aligned_cols=81 Identities=21% Similarity=0.293 Sum_probs=62.7
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc----ceeee-cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP----ITQII-GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~----p~~~~-~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.|.|.+++.+|+|.|.|.+.+. +.......+.|... |.+.. .+....+.+|+.+.|.|.+.+.| .|.+.|++
T Consensus 77 ~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~ 154 (231)
T 3ojm_B 77 SLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDA--QPHIQWIK 154 (231)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSS--CCEEEEEE
T ss_pred eEEEecCCcccCEEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCC--CCEEEEEE
Confidence 8999999999999999999987 55556677777652 23222 24567889999999999999964 56999999
Q ss_pred ----CCEEeeccc
Q psy1826 116 ----NTEVSQLNL 124 (169)
Q Consensus 116 ----~~~~~~~~~ 124 (169)
+|..+..+.
T Consensus 155 ~~~~~g~~~~~~~ 167 (231)
T 3ojm_B 155 HVEKNGSKYGPDG 167 (231)
T ss_dssp ECCBTTBSBCTTS
T ss_pred CCCCCCccccCCC
Confidence 777665443
No 130
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.40 E-value=3.3e-12 Score=93.38 Aligned_cols=107 Identities=28% Similarity=0.467 Sum_probs=74.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC--ceEEEEEEEecccee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP--IGISMYLSVVEPITQ 80 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~--~~~~~~l~v~~~p~~ 80 (169)
..|.|++++. .... ....|+. ...++ .|.|.++..+|+|.|.|.+.+. +. ....+.+.+..+|.+
T Consensus 128 ~~v~W~~~~~-~~~~------~~~~~~~-~~~~~----~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~ 195 (291)
T 2wim_A 128 PAVSWLYHNE-EVTT------ISDNRFA-MLANN----NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAI 195 (291)
T ss_dssp CEEEEECC-----CB------CCCSSEE-ECTTS----CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCC
T ss_pred CEEEEEECCc-cccc------cCCceEE-EccCC----CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCcc
Confidence 4689998763 1211 1234555 33344 7999999999999999999887 33 224456667777765
Q ss_pred eecCC--cEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 81 IIGGP--DMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 81 ~~~~~--~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
..... ...+.+|+.+.|.|.+.+. |.|.+.|+++|.++....
T Consensus 196 ~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~v~W~~~g~~~~~~~ 239 (291)
T 2wim_A 196 SMPQKSFNATAERGEEMTFSCRASGS--PEPAISWFRNGKLIEENE 239 (291)
T ss_dssp BCSCSEEECCSSSCCEEEEECBCCCB--SCCEEEEEETTEECCCTT
T ss_pred ccCcccccceecCCCeEEEEEEeecC--CCCeEEEEECCEECcCCc
Confidence 54433 3467799999999999986 456999999999887654
No 131
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.39 E-value=3.8e-12 Score=89.73 Aligned_cols=117 Identities=16% Similarity=0.273 Sum_probs=69.1
Q ss_pred CcEEEEEEcCceeE-EEEccee---ecCCCCeEEEecC-CCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEecc
Q psy1826 3 LAQISWVRHRDIHL-LTVSGYT---YTSDQRFSCIHKP-QNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEP 77 (169)
Q Consensus 3 ~~~V~W~k~~~~~~-~~~~~~~---~~~~~r~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~ 77 (169)
...|.|+|++.... ....... .....|+.+.... ..+...|.|.+++.+|+|.|.|.+.+.+.....+.|.|..+
T Consensus 29 ~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~ 108 (222)
T 4i0k_A 29 QLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEGSYTCFVSIQDFDSAAVSLQVAAP 108 (222)
T ss_dssp TEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCSCEEEEEEECCCCCCCCCCCCCBC
T ss_pred ceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCEEEEEEEEeCCCceEEEEEEEEcC
Confidence 47899999764321 1111100 0123455532210 11244899999999999999999987643344445555543
Q ss_pred --ceeeecCCcEEEcCCCcEEEEEEe-ecCCCCCCeeEEEE-CCEEee
Q psy1826 78 --ITQIIGGPDMYINKGSTMNLTCVI-KHSPEPPPAIYWLH-NTEVSQ 121 (169)
Q Consensus 78 --p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~-~~~~~~ 121 (169)
+..+...+...+.+|+.+.|.|.+ .+. |.|.+.|++ ++..+.
T Consensus 109 ~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~--P~~~v~W~~~~~~~~~ 154 (222)
T 4i0k_A 109 YSKPSMTLEPNKDLRPGNMVTITCSSYQGY--PEAEVFWKDGQGVPLT 154 (222)
T ss_dssp CCCCEEECCC-----CCSEEEEEEEEEEEB--SCCEEEEECTTSCBCC
T ss_pred CCCCcEEeCCCceecCCceEEEEEeccccc--CCCeEEEEcCCCccCC
Confidence 122333344567889999999999 665 567999998 555443
No 132
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.39 E-value=3.2e-12 Score=93.18 Aligned_cols=94 Identities=19% Similarity=0.241 Sum_probs=64.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC----CceEEEEEEEec----cceeeecCCcEEEcCCCcEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP----PIGISMYLSVVE----PITQIIGGPDMYINKGSTMNLT 98 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~----~~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~l~ 98 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .....+.|.|.. +|.+...++...+.+|+.+.|.
T Consensus 71 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~ 150 (261)
T 2xqy_G 71 KDKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLG 150 (261)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEE
T ss_pred CCcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEE
Confidence 46888654322356799999999999999999998852 122335777764 3444433333346689999999
Q ss_pred EEeecCCCCCC-eeEEEECCEEee
Q psy1826 99 CVIKHSPEPPP-AIYWLHNTEVSQ 121 (169)
Q Consensus 99 C~~~~~p~p~~-~i~W~~~~~~~~ 121 (169)
|.+.+.. |.+ .+.|++++..+.
T Consensus 151 C~~~g~~-P~~i~v~W~k~g~~~~ 173 (261)
T 2xqy_G 151 CLVKGYF-PEPVTLTWNSGSLSSG 173 (261)
T ss_dssp EEEEEEB-SSCCEEEEGGGTCCTT
T ss_pred EEEEeEe-CCCCEEEEecCCCcCc
Confidence 9999852 444 999999887643
No 133
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.39 E-value=9.1e-12 Score=93.55 Aligned_cols=111 Identities=19% Similarity=0.187 Sum_probs=74.9
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++................|+. .... .|.|.+++.+|+|.|.|.+.+. +.....+.|.|..++....
T Consensus 48 ~~i~W~k~~~~~~~~~~~~~~~~~~~~~--~~~~----~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~ 121 (349)
T 4dep_C 48 LTLIWYWTRQDRDLEEPINFRLPENRIS--KEKD----VLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFN 121 (349)
T ss_dssp CEEEEEEEESSCCCEEECCCCCGGGCEE--EETT----EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSC
T ss_pred ceEEEEECCCCCcccccccccccCceEe--ecCC----EEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccC
Confidence 6899999863111110000000123333 2344 8999999999999999999997 5566677888876554222
Q ss_pred c----CCcEEEcCCCcEEEEEEe-----ecCCCCCCeeEEEECCEEeec
Q psy1826 83 G----GPDMYINKGSTMNLTCVI-----KHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 83 ~----~~~~~v~~g~~~~l~C~~-----~~~p~p~~~i~W~~~~~~~~~ 122 (169)
. +....+.+|+.+.|.|.+ .+. |.|.+.|++++.++..
T Consensus 122 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~--p~~~v~W~k~~~~l~~ 168 (349)
T 4dep_C 122 SPMKLPVHKLYIEYGIQRITCPNVDGYFPSS--VKPTITWYMGCYKIQN 168 (349)
T ss_dssp CSCCCCEEEEETTCSEEEEECCSCTTSSCTT--SCCEEEEEETTEECCS
T ss_pred cccccCcceeeecCccEEEEcCCCcccccCC--CCceEEEeeCCEECCC
Confidence 2 224578899999999985 453 5679999999998754
No 134
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.39 E-value=1.5e-12 Score=90.60 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=68.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCC----CceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTP----PIGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWL 114 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~----~~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~ 114 (169)
.|.|.+++.+|+|.|.|.+.|.. ..+..+.|.|.. +|. +...+...+.+|+.+.|.|.+.+. ++.+.|+
T Consensus 59 ~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~-i~~~~~~~v~~G~~v~L~C~~~~~---~~~v~W~ 134 (198)
T 1ugn_A 59 QFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPT-LSAQPSPVVNSGGNVTLQCDSQVA---FDGFILC 134 (198)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCE-EEEESCSEEETTCCEEEEEECSSC---CSEEEEE
T ss_pred EEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCc-cccCCccccCCCCcEEEEEecCCC---CcEEEEE
Confidence 89999999999999999998853 334556777765 233 333344678899999999999885 3599999
Q ss_pred ECCEEeecccccce-eecceeeEEEEEEEEeeEEEEeeeceeeEEEeee
Q psy1826 115 HNTEVSQLNLMQRE-SESSSFVKRLVVLLSVSIVELTWKLEATYILAGT 162 (169)
Q Consensus 115 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
+++..+........ .........+. +.....+|.+.|.+...
T Consensus 135 k~g~~~~~~~~~~~~~~~~~~~~~L~------i~~v~~~D~G~Y~C~a~ 177 (198)
T 1ugn_A 135 KEGEDEHPQCLNSQPHARGSSRAIFS------VGPVSPSRRWWYRCYAY 177 (198)
T ss_dssp EC------CEEEC------CCEEEEE------ECCCCTTSCEEEEEEEE
T ss_pred ECCCccCCccccccccCCCcceeEEE------ecccCcccCeEEEEEEE
Confidence 99987643221110 00000112222 34556677777777655
No 135
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.39 E-value=1.1e-12 Score=92.75 Aligned_cols=114 Identities=20% Similarity=0.391 Sum_probs=72.8
Q ss_pred cEEEEEEcCceeEE----EEcceeecCCCCeEEEec---CCCCeEEEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEE
Q psy1826 4 AQISWVRHRDIHLL----TVSGYTYTSDQRFSCIHK---PQNEDWTLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSV 74 (169)
Q Consensus 4 ~~V~W~k~~~~~~~----~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v 74 (169)
..|.|+|++..... ......+....|+.+... ...+...|.|.+++.+|+|.|.|.+.+. +.....+.|.|
T Consensus 34 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V 113 (221)
T 3eow_R 34 SQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRV 113 (221)
T ss_dssp EEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCC
T ss_pred eEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEE
Confidence 45999998632111 111111222467774431 0123458999999999999999999885 45566677777
Q ss_pred eccceeeecCCcEEEcCCCcE-EEEEEeecCCCCCCeeEEEECCEE
Q psy1826 75 VEPITQIIGGPDMYINKGSTM-NLTCVIKHSPEPPPAIYWLHNTEV 119 (169)
Q Consensus 75 ~~~p~~~~~~~~~~v~~g~~~-~l~C~~~~~p~p~~~i~W~~~~~~ 119 (169)
..+|.+...+.... .+|+.+ .|.|.+.+. .|.|.++|++++..
T Consensus 114 ~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g-~P~p~v~W~k~~~~ 157 (221)
T 3eow_R 114 LAKPQNTAEVQKVQ-LTGEPVPMARCVSTGG-RPPAQITWHSDLGG 157 (221)
T ss_dssp CCCCEEEEEEECCC-CCSSSCCEEEEEEESC-SSCCCEEEECSSSC
T ss_pred EECCCceeecCCcc-cCCceEEEEEEECCCc-cCCCeeEEEeCCCC
Confidence 77776543322222 578888 599998833 35679999987543
No 136
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.38 E-value=4.9e-12 Score=93.79 Aligned_cols=119 Identities=18% Similarity=0.344 Sum_probs=78.5
Q ss_pred cEEEEEEcCceeEEEE----cceeecCCCCeEEEecC---CCCeEEEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEE
Q psy1826 4 AQISWVRHRDIHLLTV----SGYTYTSDQRFSCIHKP---QNEDWTLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSV 74 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~----~~~~~~~~~r~~~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v 74 (169)
.+|.|+|++....... ....+....|+...... ..++++|.|.+++.+|+|.|.|.+.+. +.....+.|.+
T Consensus 35 ~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v 114 (313)
T 4fqp_A 35 SQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV 114 (313)
T ss_dssp CEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECC
T ss_pred EEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeee
Confidence 3699999874221111 01123344565532211 123457999999999999999998765 44555566666
Q ss_pred eccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 75 VEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 75 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
..+|..........+..++.+.+.|.+.+. .|++.+.|++++..+...
T Consensus 115 ~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~-~P~~~i~W~~~~~~~~~~ 162 (313)
T 4fqp_A 115 LAKPQNTAEVQKVQLTGEPVPMARCVSTGG-RPPAQITWHSDLGGMPNT 162 (313)
T ss_dssp BBCCEEEEEECCBCCCSSCEEEEEEEEEEE-BSCCEEEEEETTCCEEEE
T ss_pred ccCCcceecccceEeecCceEEEEEEccCc-cCCcEEEeecCCcccccc
Confidence 777766655566667788889999987643 367799999998776543
No 137
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.38 E-value=9.5e-13 Score=96.34 Aligned_cols=107 Identities=19% Similarity=0.259 Sum_probs=76.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEec----c
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVE----P 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~----~ 77 (169)
..|.|+++++.... ...++. ...+. .|.|.++..+|+|.|.|.+.+. +. ....+.|.|.. +
T Consensus 120 ~~v~W~~~~~~~~~--------~~~~~~-~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~ 186 (292)
T 4dkd_C 120 AGVSLVRVRGRPLM--------RHTNYS-FSPWH----GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGP 186 (292)
T ss_dssp SSEEEEEGGGCCCC--------SSCCEE-CCSSS----CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSS
T ss_pred eeEEEEecCCCccc--------cCCccc-ccCCc----eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCC
Confidence 36899987432221 123444 23333 5999999999999999999977 32 23367777875 6
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
|.+...+....+.+|+.+.|.|.+.+.| |++.+.|++++..+....
T Consensus 187 p~i~~~~~~~~~~~g~~v~l~C~~~~~~-~~~~~~w~~~~~~~~~~~ 232 (292)
T 4dkd_C 187 PALTLVPAELVRIRGEAAQIVCSASSVD-VNFDVFLQHNNTKLAIPQ 232 (292)
T ss_dssp CEEEEESSCBCCCSSSCEEEEEEEEESS-SCCEEECCBSSCCCCCCB
T ss_pred CeEEccCCceeEecCCCEEEEEEecCCC-CceEEEEeCCCcccccCc
Confidence 7666666666677999999999999875 567889999887765443
No 138
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.38 E-value=3.1e-12 Score=93.17 Aligned_cols=93 Identities=25% Similarity=0.377 Sum_probs=65.1
Q ss_pred CeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-----CCceEEEEEEEec------cceeee-cCCcEEEcCCCcEE
Q psy1826 29 RFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-----PPIGISMYLSVVE------PITQII-GGPDMYINKGSTMN 96 (169)
Q Consensus 29 r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-----~~~~~~~~l~v~~------~p~~~~-~~~~~~v~~g~~~~ 96 (169)
|+.+.. ...+.+.|.|.+++.+|+|.|.|.+.+. ......+.|.|.. +|.+.. .+....+.+|+.+.
T Consensus 90 r~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~ 168 (270)
T 3qib_D 90 RFSAEC-PSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 168 (270)
T ss_dssp HEEEEC-CTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEE
T ss_pred cEEEEe-CCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceE
Confidence 777543 2345679999999999999999999863 1222335666765 343332 23334455699999
Q ss_pred EEEEeecCCCCCC-eeEEEECCEEeecc
Q psy1826 97 LTCVIKHSPEPPP-AIYWLHNTEVSQLN 123 (169)
Q Consensus 97 l~C~~~~~p~p~~-~i~W~~~~~~~~~~ 123 (169)
|.|.+.+.+ |.| .+.|+++|.++..+
T Consensus 169 L~C~~~g~~-P~~~~v~W~k~g~~l~~~ 195 (270)
T 3qib_D 169 LVCLATGFY-PDHVELSWWVNGKEVHSG 195 (270)
T ss_dssp EEEEEEEEB-SSCEEEEEEETTEEECTT
T ss_pred EEEEeccee-CCCeEEEEEECCEECCCC
Confidence 999999853 445 89999999988654
No 139
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.38 E-value=4.3e-12 Score=91.84 Aligned_cols=94 Identities=19% Similarity=0.237 Sum_probs=61.1
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-----------------------CceEEEEEEEe----ccce
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-----------------------PIGISMYLSVV----EPIT 79 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-----------------------~~~~~~~l~v~----~~p~ 79 (169)
..|+.+......+.++|.|.+++.+|+|.|.|.+.+.. .......|.|. .+|.
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~ 143 (248)
T 3u2s_H 64 WGRLSISRDNSKDTLYLQMNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPS 143 (248)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCE
T ss_pred CCcEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCE
Confidence 47888655443467789999999999999999987621 12223456665 2344
Q ss_pred eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 80 QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 80 ~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
+...++...+..|+.+.|.|.+.+.+.+++.+.|++++..+
T Consensus 144 v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~ 184 (248)
T 3u2s_H 144 VFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTS 184 (248)
T ss_dssp EEEECCC------CEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred EEEeCCCccccCCCcEEEEEEEeeEECCCeEEEEeECCccC
Confidence 44334444556799999999999864235789999988643
No 140
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.38 E-value=1.4e-11 Score=91.27 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=73.6
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC--ceEEEEEEEecccee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP--IGISMYLSVVEPITQ 80 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~--~~~~~~l~v~~~p~~ 80 (169)
..|.|++++.. ...........+.++... ..|.|.++..+|.|.|.|.+.|. +. ....+.|.|..+|.+
T Consensus 148 ~~i~W~~~~~~-~~~~~~~~~~~~~~~~~~-------s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v 219 (313)
T 4fqp_A 148 AQITWHSDLGG-MPNTSQVPGFLSGTVTVT-------SLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEV 219 (313)
T ss_dssp CEEEEEETTCC-EEEEEEEECSSTTCEEEE-------EEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEE
T ss_pred cEEEeecCCcc-ccccceeeeecccccccc-------eeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCcc
Confidence 47899998753 222222222223333321 16889999999999999999986 33 334455666667765
Q ss_pred eec-CCcEEEcCCCcEEEEEEeecCCCCCC-eeEEEECCEEeec
Q psy1826 81 IIG-GPDMYINKGSTMNLTCVIKHSPEPPP-AIYWLHNTEVSQL 122 (169)
Q Consensus 81 ~~~-~~~~~v~~g~~~~l~C~~~~~p~p~~-~i~W~~~~~~~~~ 122 (169)
... .....+.+|+.+.|.|.+.|.| .| .+.|++++.++..
T Consensus 220 ~~~~~~~~~~~~g~~v~l~C~~~g~P--~p~~v~W~~~~~~l~~ 261 (313)
T 4fqp_A 220 SISGYDNNWYLGQNEATLTCDARSNP--EPTGYNWSTTMGPLPP 261 (313)
T ss_dssp EEECCCSCEETTCCCEEEEEEEEEES--CCCEEEEEETTBSCCT
T ss_pred ccccccceeecCCCeEEEEEEecCCC--CCcEEEEEECCEECCC
Confidence 443 3456677899999999999975 45 6999999987643
No 141
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.37 E-value=3.9e-12 Score=98.22 Aligned_cols=95 Identities=20% Similarity=0.311 Sum_probs=68.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-----CceEEEEEEEec----cceeeecCCcEEEcCCCcEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-----PIGISMYLSVVE----PITQIIGGPDMYINKGSTMN 96 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-----~~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~ 96 (169)
..|+.+......+...|.|.+++.+|+|.|.|.+.|. + .......+.|.. +|.+...++...+.+|+.+.
T Consensus 283 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~ 362 (438)
T 1qgc_4 283 KGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVT 362 (438)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEE
T ss_pred CCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEE
Confidence 4688765544345678999999999999999999983 2 233445677763 34444444444466899999
Q ss_pred EEEEeecCCCCCC-eeEEEECCEEeec
Q psy1826 97 LTCVIKHSPEPPP-AIYWLHNTEVSQL 122 (169)
Q Consensus 97 l~C~~~~~p~p~~-~i~W~~~~~~~~~ 122 (169)
|.|.+.|.. |.| .+.|+++|.++..
T Consensus 363 L~C~~~g~~-P~~~~v~W~~~g~~~~~ 388 (438)
T 1qgc_4 363 LGCLVKGYF-PEPVTVTWNSGSLSSGV 388 (438)
T ss_dssp EEEEEESCB-SSCCEEEEGGGTCCSSE
T ss_pred EEEEecccc-CCCcEEEEecCCCCCce
Confidence 999999862 445 9999999887653
No 142
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.37 E-value=2.9e-12 Score=99.96 Aligned_cols=93 Identities=17% Similarity=0.283 Sum_probs=67.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C------------CceEEEEEEEec----cceeeecCCcEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P------------PIGISMYLSVVE----PITQIIGGPDMYI 89 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~------------~~~~~~~l~v~~----~p~~~~~~~~~~v 89 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + .....+.|.|.. +|.+...++...+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~ 144 (457)
T 1hzh_H 65 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKS 144 (457)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCC
T ss_pred cCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccc
Confidence 4688865543345678999999999999999999886 3 123445677764 4444443444446
Q ss_pred cCCCcEEEEEEeecCCCC-CCeeEEEECCEEe
Q psy1826 90 NKGSTMNLTCVIKHSPEP-PPAIYWLHNTEVS 120 (169)
Q Consensus 90 ~~g~~~~l~C~~~~~p~p-~~~i~W~~~~~~~ 120 (169)
.+|+.+.|.|.+.+.+ | ++.+.|++++.++
T Consensus 145 ~~g~~v~L~C~~~g~~-P~~~~v~W~k~~~~~ 175 (457)
T 1hzh_H 145 TSGGTAALGCLVKDYF-PEPVTVSWNSGALTS 175 (457)
T ss_dssp CTTCCEEEEEEEESBB-SCCCEEEETTTTBCT
T ss_pred cCCCcEEEEEEEeEEe-CCCeEEEEEeCCEec
Confidence 7999999999999862 4 3799999998654
No 143
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.37 E-value=3.1e-12 Score=89.89 Aligned_cols=79 Identities=19% Similarity=0.257 Sum_probs=59.7
Q ss_pred EEEcCCCCCCCeEEEEEEEcC-CCc-eEEEEEEEec-cceeeecCCcEEEcCCCcEEEEEEe-ecCCCCCCeeEEEECCE
Q psy1826 43 LQIKYPQKRDSGIYECQVSTT-PPI-GISMYLSVVE-PITQIIGGPDMYINKGSTMNLTCVI-KHSPEPPPAIYWLHNTE 118 (169)
Q Consensus 43 L~I~~v~~~D~G~Y~C~~~~~-~~~-~~~~~l~v~~-~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~~ 118 (169)
|.|.+++.+|+|.|.|.+.+. +.. .....+.|.. +|.+...+....+.+|+.+.|.|.+ .+. |.|.+.|++++.
T Consensus 71 l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~--p~~~v~W~~~g~ 148 (217)
T 2vr9_A 71 RTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGI--PEPTLIWIKDGV 148 (217)
T ss_dssp SCCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEE--SCCEEEEEETTE
T ss_pred EEeccCCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCC--CCCeEEEEECCc
Confidence 368899999999999999986 322 2244555554 3444455667889999999999998 675 567999999999
Q ss_pred Eeecc
Q psy1826 119 VSQLN 123 (169)
Q Consensus 119 ~~~~~ 123 (169)
++...
T Consensus 149 ~~~~~ 153 (217)
T 2vr9_A 149 PLDDL 153 (217)
T ss_dssp EECCC
T ss_pred CCCcc
Confidence 88743
No 144
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.37 E-value=2.3e-12 Score=96.85 Aligned_cols=104 Identities=13% Similarity=0.211 Sum_probs=60.2
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCc----eEEEEEEEec--
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPI----GISMYLSVVE-- 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~----~~~~~l~v~~-- 76 (169)
..|.|+|++. .+. ...++. .... .|.|.+++.+|+|.|.|.+.|. +.. ...+.|.|..
T Consensus 155 ~~v~W~k~~~--~l~-------~~~~~~--~~~~----~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~ 219 (349)
T 4dep_C 155 PTITWYMGCY--KIQ-------NFNNVI--PEGM----NLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP 219 (349)
T ss_dssp CEEEEEETTE--ECC-------SCSSEE--EETT----EEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCG
T ss_pred ceEEEeeCCE--ECC-------Ccccee--ecCC----EEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccC
Confidence 5799999874 221 112322 2233 7999999999999999999986 222 4556666665
Q ss_pred ----cceeeecCCc--EEEcCCCcEEEEEEeecC--CCCCCeeEEEECCEEeec
Q psy1826 77 ----PITQIIGGPD--MYINKGSTMNLTCVIKHS--PEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 77 ----~p~~~~~~~~--~~v~~g~~~~l~C~~~~~--p~p~~~i~W~~~~~~~~~ 122 (169)
+|.+...... ..+.+|+.+.|.|.+.+. ..|.|.+.|++++.++..
T Consensus 220 ~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~ 273 (349)
T 4dep_C 220 KNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDD 273 (349)
T ss_dssp GGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC----
T ss_pred CCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccc
Confidence 3443333322 278899999999999954 136679999999988765
No 145
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.37 E-value=3e-12 Score=91.95 Aligned_cols=94 Identities=17% Similarity=0.216 Sum_probs=62.0
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-------------CceEEEEEEEe----ccceeeecCCcEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-------------PIGISMYLSVV----EPITQIIGGPDMY 88 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-------------~~~~~~~l~v~----~~p~~~~~~~~~~ 88 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + .......|.|. .+|.+...++...
T Consensus 72 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~ 151 (239)
T 3tv3_H 72 KSRLTLALDTPKNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSK 151 (239)
T ss_dssp GGGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCC
T ss_pred cCCEEEEEECCCCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChh
Confidence 3688865544346778999999999999999998753 1 11222355554 2344443344444
Q ss_pred EcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 89 INKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 89 v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
+..|+.+.|.|.+.+.+.++..+.|++++..+
T Consensus 152 ~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~ 183 (239)
T 3tv3_H 152 STSGGTAALGCLVKDYFPEPVTVSWNSGALTS 183 (239)
T ss_dssp C--TTEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred hccCCcEEEEEEEeeEeCCCeEEEEEECCccC
Confidence 55799999999999864234468999988643
No 146
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.36 E-value=1.9e-11 Score=96.63 Aligned_cols=82 Identities=11% Similarity=0.151 Sum_probs=61.5
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeec-CCcEE-EcCCCcEEEEEEeecCCC--CCCeeEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIG-GPDMY-INKGSTMNLTCVIKHSPE--PPPAIYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~-~~~~~-v~~g~~~~l~C~~~~~p~--p~~~i~W~~~ 116 (169)
.|.|.++..+| |.|.|.+.|. +.......+.+...|.+... +.... +.+|+.+.|.|.+.|.|. |.+.++|+++
T Consensus 282 ~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~ 360 (523)
T 2rcj_C 282 VVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVD 360 (523)
T ss_pred EEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEEC
Confidence 79999999999 9999999998 65555556655555554333 33333 788999999999998642 2369999999
Q ss_pred CEEeeccc
Q psy1826 117 TEVSQLNL 124 (169)
Q Consensus 117 ~~~~~~~~ 124 (169)
|.++....
T Consensus 361 g~~l~~~~ 368 (523)
T 2rcj_C 361 GVQVHNAK 368 (523)
T ss_pred CeEccCCc
Confidence 99886543
No 147
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.36 E-value=6.9e-11 Score=85.50 Aligned_cols=111 Identities=17% Similarity=0.269 Sum_probs=73.6
Q ss_pred CcEEEEEEcCceeE---EE-E--cceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC----ceEEEE
Q psy1826 3 LAQISWVRHRDIHL---LT-V--SGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP----IGISMY 71 (169)
Q Consensus 3 ~~~V~W~k~~~~~~---~~-~--~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~----~~~~~~ 71 (169)
...|.|+|+..... +. . .........|+.+........+.|.|.+++.+|+|.|.|.+.+. +. ....+.
T Consensus 32 ~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~ 111 (256)
T 3tf7_C 32 TPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKGTGSKLSFGKGAK 111 (256)
T ss_dssp CCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEECTTCTTCEEECCCEE
T ss_pred CceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEecCCCccceEECCCeE
Confidence 35789998542111 11 1 01112235688754344456778999999999999999999886 21 222346
Q ss_pred EEEec--------------------cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 72 LSVVE--------------------PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 72 l~v~~--------------------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
|.|.. +|.+...+....+.+|+.+.|.|.+.+. .+.+.|+++
T Consensus 112 l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~---~~~v~W~k~ 173 (256)
T 3tf7_C 112 LTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS---HNYMYWYRQ 173 (256)
T ss_dssp EEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC---CSEEEEEEE
T ss_pred EEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC---ceEEEEEEE
Confidence 66664 3445555667788899999999999874 359999983
No 148
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.36 E-value=1.7e-12 Score=89.90 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=52.6
Q ss_pred EEEEcC-CCCCCCeEEEEEEEcC-CCceEEEEEEEec--ccee-------------------eec-CCcE---EEcCCCc
Q psy1826 42 TLQIKY-PQKRDSGIYECQVSTT-PPIGISMYLSVVE--PITQ-------------------IIG-GPDM---YINKGST 94 (169)
Q Consensus 42 ~L~I~~-v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~--~p~~-------------------~~~-~~~~---~v~~g~~ 94 (169)
.|.|.+ ++.+|+|.|.|.+.|. +.......+.|.. ++.. ... .... .+.+|+.
T Consensus 45 ~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 124 (186)
T 1jbj_A 45 HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGS 124 (186)
T ss_dssp EEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCE
T ss_pred EEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccccccccccccccccCCccccccccccccccccceecCCCCe
Confidence 799999 9999999999999987 5544444443322 1110 000 0011 2349999
Q ss_pred EEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 95 MNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 95 ~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
+.|.|.+ |.|.+.|+++|.++...
T Consensus 125 v~l~C~~-----p~p~i~W~k~g~~i~~~ 148 (186)
T 1jbj_A 125 VLLTCGL-----TDKTIKWLKDGSIISPL 148 (186)
T ss_dssp EEEECSS-----SCSCEEEEETTEECCCS
T ss_pred EEEEeeC-----CCCeEEEEECCEECccc
Confidence 9999988 35699999999998643
No 149
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.36 E-value=4.7e-12 Score=105.07 Aligned_cols=80 Identities=19% Similarity=0.317 Sum_probs=69.4
Q ss_pred CeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECC
Q psy1826 39 EDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNT 117 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~ 117 (169)
....|.|.++..+|+|.|.|.+.|. +.....+.|.|..+|.+...+....+.+|+.+.|.|.+.|.| .|.++|++++
T Consensus 675 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P--~p~i~W~k~~ 752 (816)
T 3dmk_A 675 RGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFP--KPQVTWKKAV 752 (816)
T ss_dssp TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEES--CCEEECCEEC
T ss_pred CeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCC--CCeEEEEecC
Confidence 3448999999999999999999998 777778889999999888888888899999999999999964 5699999977
Q ss_pred EEe
Q psy1826 118 EVS 120 (169)
Q Consensus 118 ~~~ 120 (169)
..+
T Consensus 753 ~~~ 755 (816)
T 3dmk_A 753 GDT 755 (816)
T ss_dssp SSS
T ss_pred CCC
Confidence 543
No 150
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.36 E-value=1.6e-11 Score=89.80 Aligned_cols=111 Identities=23% Similarity=0.387 Sum_probs=71.8
Q ss_pred cEEEEEEcCcee---EEEEc-cee-ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEec
Q psy1826 4 AQISWVRHRDIH---LLTVS-GYT-YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~---~~~~~-~~~-~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~ 76 (169)
..|.|+|++... .+... ... .....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. +. ....+.|.|..
T Consensus 42 ~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~ 119 (276)
T 3auv_A 42 TAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGS--GTDFTLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKG 119 (276)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC--
T ss_pred CcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEecc--CCeEEEEEccCChhhCEEEEEEEecCCcccccCCEEEEEec
Confidence 468999865311 11111 000 012468875432 35668999999999999999999886 32 33345666654
Q ss_pred cc--------------eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 77 PI--------------TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 77 ~p--------------~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
+| ..+..+....+.+|+.+.|.|.+.+.|.+.+.+.|+++
T Consensus 120 ~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 173 (276)
T 3auv_A 120 GGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQ 173 (276)
T ss_dssp ---------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEc
Confidence 32 22334557889999999999999986432579999985
No 151
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.36 E-value=3.3e-12 Score=91.24 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=65.6
Q ss_pred CCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC---C--CceEEEEEEEec---------cce-eeecCCcEEEc
Q psy1826 26 SDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT---P--PIGISMYLSVVE---------PIT-QIIGGPDMYIN 90 (169)
Q Consensus 26 ~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~---~--~~~~~~~l~v~~---------~p~-~~~~~~~~~v~ 90 (169)
.+.|+.+....+.+.+.|.|.+++.+|+|.|.|.+.+. . .....+.|.|.. +|. .+..+....+.
T Consensus 64 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~ 143 (230)
T 1ypz_F 64 EYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETN 143 (230)
T ss_dssp SSSEEEEEECCTTTEEEEEECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHH
T ss_pred cCCeEEEEEcCCCCEEEEEECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhc
Confidence 35788866544447789999999999999999999873 1 122345777751 222 12223333455
Q ss_pred CCCcEEEEEEeecC-CCCCCeeEEEE-CCEEee
Q psy1826 91 KGSTMNLTCVIKHS-PEPPPAIYWLH-NTEVSQ 121 (169)
Q Consensus 91 ~g~~~~l~C~~~~~-p~p~~~i~W~~-~~~~~~ 121 (169)
+|+.+.|.|.+.+. | +++.++|++ +|.++.
T Consensus 144 ~g~~~~L~C~~~g~~P-~~~~v~W~~~~g~~l~ 175 (230)
T 1ypz_F 144 LHKTGTYLCLLEAFFP-DVIRVYWKEKDGNTIL 175 (230)
T ss_dssp HHSCEEEEEEEEEESS-CCCEEEEECTTSSCBC
T ss_pred cCCcceEEEEEeeecC-CCeEEEEEccCCeEcc
Confidence 78999999999986 3 246999999 887654
No 152
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.36 E-value=8.6e-12 Score=88.96 Aligned_cols=92 Identities=16% Similarity=0.281 Sum_probs=63.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC---------CceEEEEEEEe----ccceeeecCCcEEEcCCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP---------PIGISMYLSVV----EPITQIIGGPDMYINKGS 93 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~---------~~~~~~~l~v~----~~p~~~~~~~~~~v~~g~ 93 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .....+.|.|. .+|.+....+...+.+|+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~ 144 (230)
T 3n9g_H 65 QGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGG 144 (230)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTC
T ss_pred CCcEEEEecCCCCEEEEEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCC
Confidence 47888766555578889999999999999999998742 12233456664 233433333444456899
Q ss_pred cEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 94 TMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 94 ~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
.+.|.|.+.+.+.+++.+.| ++..+
T Consensus 145 ~v~L~C~~~~~~P~~~~v~W--~~~~~ 169 (230)
T 3n9g_H 145 TAALGCLVKDYFPEPVTVSW--NSGAL 169 (230)
T ss_dssp EEEEEEEEEEEBSSCCEEEE--GGGTB
T ss_pred CEEEEEEEEeEECCCEEEEE--CCccc
Confidence 99999999986422568999 55443
No 153
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.35 E-value=6.8e-11 Score=81.79 Aligned_cols=104 Identities=18% Similarity=0.312 Sum_probs=69.5
Q ss_pred cEEEEEE--cCceeEEEEcc--eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCce--EEEEEEEec
Q psy1826 4 AQISWVR--HRDIHLLTVSG--YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIG--ISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k--~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~--~~~~l~v~~ 76 (169)
-.|.|+| ++. .+..... ..+..+.|+.+ ..++ +|.|.+++.+|+|.|.|.+.+. +... ..+.|.|..
T Consensus 31 ~~i~W~k~~~~~-~i~~~~~~~~~~~~~~R~~~-~~ng----sL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~ 104 (182)
T 1hnf_A 31 DDIKWEKTSDKK-KIAQFRKEKETFKEKDTYKL-FKNG----TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQE 104 (182)
T ss_dssp EEEEEEEGGGCC-EEEEECGGGCEEESCTTEEE-CTTS----CEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEEC
T ss_pred CEEEEEECCCCc-EEEEEeCccCCCCCCCeEEE-CCCC----CEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcC
Confidence 4789999 654 2211111 11124578884 4566 8999999999999999999987 4432 345667764
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
+. ..+.+.. .+..+.|.|.+.+.| .|.+.|+++|.++
T Consensus 105 ~~----~~P~i~~-~~~~v~L~C~~~~~p--~~~~~W~~~g~~l 141 (182)
T 1hnf_A 105 RV----SKPKISW-TCINTTLTCEVMNGT--DPELNLYQDGKHL 141 (182)
T ss_dssp CC----CCCEEEE-ETTTTEEEEECSSCS--SCEEEEEESSCEE
T ss_pred cC----CCCEEEE-ccCcEEEEeEccCCC--CCEEEEEECCEEC
Confidence 31 1122222 234789999999864 5799999999887
No 154
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.35 E-value=1.8e-11 Score=90.42 Aligned_cols=90 Identities=11% Similarity=0.218 Sum_probs=62.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--C----ceEEEEEEEec----------------cceeeecC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--P----IGISMYLSVVE----------------PITQIIGG 84 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~----~~~~~~l~v~~----------------~p~~~~~~ 84 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. . ....+.|.|.. ++.+...+
T Consensus 87 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p 166 (291)
T 2gki_A 87 KGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSP 166 (291)
T ss_dssp BTTBCEEEEGGGTEEEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSC
T ss_pred CCCEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCC
Confidence 36777544322346689999999999999999998752 1 11234677765 12233334
Q ss_pred CcEEEcCCCcEEEEEEeecCCCCC----CeeEEEEC
Q psy1826 85 PDMYINKGSTMNLTCVIKHSPEPP----PAIYWLHN 116 (169)
Q Consensus 85 ~~~~v~~g~~~~l~C~~~~~p~p~----~~i~W~~~ 116 (169)
..+.+.+|+.+.|.|.+.+.|.|. +.+.|+++
T Consensus 167 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 167 SSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQ 202 (291)
T ss_dssp SEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred CEEEEcCCCcEEEEEEcCCccccccccceeEEEEEE
Confidence 567899999999999998864221 38999985
No 155
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.35 E-value=1.1e-11 Score=85.08 Aligned_cols=108 Identities=19% Similarity=0.255 Sum_probs=69.3
Q ss_pred cEEEEEEcCceeEEEEccee-ec----CCCCeEEEec-CCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEecc
Q psy1826 4 AQISWVRHRDIHLLTVSGYT-YT----SDQRFSCIHK-PQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEP 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~-~~----~~~r~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~ 77 (169)
..|.|+|++....+...... .. ...|+..... ...+...|.|.+++.+|+|.|.|.+.+. ...+.|.|...
T Consensus 25 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~---~~~~~l~V~~~ 101 (184)
T 2ny1_B 25 IQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQ---KEEVQLLVFGL 101 (184)
T ss_dssp CCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEEETTE---EEEEEEEEEEE
T ss_pred eEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEEEEcC---CCcEEEEEEEe
Confidence 57899998743233221111 00 1234442210 0112346999999999999999999875 22445555532
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
..++...+.+|+.+.|.|.+.+. |.|.+.|++++..+
T Consensus 102 ----~~~~~~~v~~g~~~~l~C~~~~~--p~~~v~W~~~~~~~ 138 (184)
T 2ny1_B 102 ----TANSDTHLLQGQSLTLTLESPPG--SSPSVQCRSPRGKN 138 (184)
T ss_dssp ----EESSCSEEETTCCEEEEEECCTT--CCCEEEEECTTSCE
T ss_pred ----cCCCCceeecCCCEEEEEEcCCC--CCCEEEEEeCCCcc
Confidence 22445678899999999999885 56799999987654
No 156
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.35 E-value=2.4e-12 Score=102.65 Aligned_cols=79 Identities=16% Similarity=0.186 Sum_probs=63.7
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecC--CcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGG--PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEV 119 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~ 119 (169)
.|.|.+++.+|+|.|.|.+.|. ....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.| .|.++|+++|.+
T Consensus 291 ~L~I~~v~~~DsG~Y~C~a~N~--~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~k~g~~ 366 (527)
T 3qs9_E 291 FAFVSSVARNDTGYYTCSSSKH--PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYP--QIRCTWTFSRKS 366 (527)
T ss_dssp EEEESSCCGGGCEEEEEEETTE--EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEES--CCEEEEEETTEE
T ss_pred EEEEccCCcccCeEEEEEEEeC--CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecC--CCEEEEEECCEE
Confidence 6999999999999999999986 5667788888777655443 246678999999999999974 569999999999
Q ss_pred eeccc
Q psy1826 120 SQLNL 124 (169)
Q Consensus 120 ~~~~~ 124 (169)
+....
T Consensus 367 l~~~~ 371 (527)
T 3qs9_E 367 FPCEQ 371 (527)
T ss_dssp EECBC
T ss_pred CcCCc
Confidence 86554
No 157
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.34 E-value=7.2e-12 Score=88.95 Aligned_cols=107 Identities=17% Similarity=0.193 Sum_probs=70.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CC--ceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PP--IGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~--~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.|.|.+++.+|+|.|.|.+.+. +. .+..+.|.|.. +|.+... +...+.+|+.+.|.|...+. |.+.+.|++
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~-p~~~v~~G~~v~L~C~~~~~--~~~~~~W~k 141 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSAD-RGLVLMPGENISLTCSSAHI--PFDRFSLAK 141 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEES-SCSEECTTCCCEEEEECSSS--CCSEEEEEE
T ss_pred EEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeC-CCCccCCCCCEEEEEeCCCC--CCCEEEEEE
Confidence 7999999999999999999986 31 22335666654 3343333 35678999999999966554 457999999
Q ss_pred CCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEeee
Q psy1826 116 NTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAGT 162 (169)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
+|..+.... . . ......+. +..+..+|.+.|.+...
T Consensus 142 ~g~~~~~~~--~-~--~~~~~~L~------I~~v~~~D~G~Y~C~a~ 177 (218)
T 1uct_A 142 EGELSLPQH--Q-S--GEHPANFS------LGPVDLNVSGIYRCYGW 177 (218)
T ss_dssp TTCSSCCSE--E-E--CSSSEEEE------CCSCCGGGCEEEEEEEE
T ss_pred CCCcccccc--c-C--CCccCEEE------EccCCcccCEEEEEEEE
Confidence 998665311 0 0 01112222 34556677888887764
No 158
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.34 E-value=3.4e-12 Score=90.40 Aligned_cols=110 Identities=18% Similarity=0.225 Sum_probs=67.4
Q ss_pred cEEEEEEcCceeEEEEcce--eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEE----EEec
Q psy1826 4 AQISWVRHRDIHLLTVSGY--TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYL----SVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~--~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l----~v~~ 76 (169)
..|.|+|++. ........ ....+.++.. ...|.|.+++.+|+|.|.|.+.+. ........+ .+..
T Consensus 45 ~~v~W~k~~~-~~~~~~~~~~~~~~~~~~~~-------~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~ 116 (218)
T 2rgs_A 45 VQISWFVNNV-EVHTAQTQTHREDYNSTIRV-------VSTLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVR 116 (218)
T ss_dssp EEEEEEETTE-EECCCEEEEEEETTTTEEEE-------EEEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCB
T ss_pred eEEEEEECCc-cccCcccccccccCCCeEEE-------EEEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeecCCCCC
Confidence 6899999874 22111000 0111233331 127999999999999999999987 332112222 2334
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
+|.+...+......+|+.+.|.|.+.|.+.++..++|+++|.++.
T Consensus 117 ~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 161 (218)
T 2rgs_A 117 APQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEE 161 (218)
T ss_dssp CCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred CCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEecc
Confidence 555443333222235899999999999521334999999999874
No 159
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.34 E-value=2.6e-11 Score=88.29 Aligned_cols=112 Identities=20% Similarity=0.316 Sum_probs=72.9
Q ss_pred CcEEEEEEcCce---eEEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEe
Q psy1826 3 LAQISWVRHRDI---HLLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~ 75 (169)
...|.|+|+..+ ..+....... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. .. ....+.|.|.
T Consensus 40 ~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~ 117 (264)
T 2gjj_A 40 KNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGS--GTDFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIK 117 (264)
T ss_dssp EECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred CceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecC--CCEEEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEE
Confidence 467999996421 1111110000 12468875432 35668999999999999999999886 21 2334567776
Q ss_pred ccc-------------------eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 76 EPI-------------------TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 76 ~~p-------------------~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.+| ..+..++...+.+|+.+.|.|.+.+.+.+.+.+.|+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 118 RGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGYFINWVKK 177 (264)
T ss_dssp CC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred cCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCeEEEEEEE
Confidence 552 22333445678999999999999986422379999985
No 160
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.34 E-value=1e-12 Score=93.48 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=64.0
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCC----ceEEEEEEEe----ccceeeecCCcEEEcCCCcEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPP----IGISMYLSVV----EPITQIIGGPDMYINKGSTMNLT 98 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~----~~~~~~l~v~----~~p~~~~~~~~~~v~~g~~~~l~ 98 (169)
..|+..... .+.+.|.|.+++.+|+|.|.|.+.+... ....+.|.|. .+|.+...++...+.+|+.+.|.
T Consensus 79 ~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~ 156 (234)
T 2j6e_L 79 PDRFSGSKS--GTSASLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLV 156 (234)
T ss_dssp CTTEEEEEE--TTEEEEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEE
T ss_pred cccEEEEec--CCeEEEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEE
Confidence 357775432 3456899999999999999999998722 1223345553 23433333333233468899999
Q ss_pred EEeecCCCCCCeeEEEECCEEeecc
Q psy1826 99 CVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 99 C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
|.+.+.+.|++.++|+++|.++..+
T Consensus 157 C~~~g~~p~~~~v~W~k~g~~l~~~ 181 (234)
T 2j6e_L 157 CLISDFFPGAVTVAWKADGAPVKAG 181 (234)
T ss_dssp ECCCBCSSCCCEEEEEETTEECCSS
T ss_pred EEEEEEcCCceEEEEEECCEECCCC
Confidence 9999864233599999999987644
No 161
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.34 E-value=3.8e-12 Score=93.30 Aligned_cols=96 Identities=19% Similarity=0.229 Sum_probs=66.4
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-----C--CceEEEEEEEec------cceeeec-CCcEEEcCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-----P--PIGISMYLSVVE------PITQIIG-GPDMYINKG 92 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-----~--~~~~~~~l~v~~------~p~~~~~-~~~~~v~~g 92 (169)
..|+.+.... .+.+.|.|.+++.+|+|.|.|.+.+. . .....+.|.|.. +|.+... +....+.+|
T Consensus 87 ~~R~~~~~~~-~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g 165 (279)
T 2wbj_D 87 KDKFLINHAS-LTLSTLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHT 165 (279)
T ss_dssp SSSEEEEECS-SSEEEEEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHH
T ss_pred CCcEEEEeCC-CCEEEEEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCC
Confidence 4688855432 46779999999999999999999883 1 112335677764 3333322 222334578
Q ss_pred CcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 93 STMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 93 ~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
+.+.|.|.+.+.+.+++.+.|+++|.++...
T Consensus 166 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 196 (279)
T 2wbj_D 166 QKATLVCLATGFYPDHVELSWWVNGKEVHSG 196 (279)
T ss_dssp SCCEEEEEEEEEBSSCEEEEEEETTEECCTT
T ss_pred CceEEEEEEeeEcCCCcEEEEEECCEECCCC
Confidence 9999999999863224799999999987643
No 162
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.34 E-value=9.6e-12 Score=96.56 Aligned_cols=93 Identities=20% Similarity=0.301 Sum_probs=65.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC---ceEEEEEEEec----cceeeecCCcEEEcCCCcEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP---IGISMYLSVVE----PITQIIGGPDMYINKGSTMNLT 98 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~---~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~l~ 98 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. +. ....+.|.|.. +|.+...++...+.+|+.+.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 144 (444)
T 1igt_B 65 KGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLG 144 (444)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEE
Confidence 4688865543345679999999999999999999886 32 22345677763 3443333333335789999999
Q ss_pred EEeecCCCCCC-eeEEEECCEEe
Q psy1826 99 CVIKHSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 99 C~~~~~p~p~~-~i~W~~~~~~~ 120 (169)
|.+.+.+ |.| .+.|++++..+
T Consensus 145 C~~~g~~-P~p~~v~W~~~~~~~ 166 (444)
T 1igt_B 145 CLVKGYF-PEPVTLTWNSGSLSS 166 (444)
T ss_dssp EEEEEEB-SSCCEEEEGGGTBCT
T ss_pred EEEccee-CCCcEEEEecCCCCC
Confidence 9999862 444 99999988753
No 163
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.33 E-value=1e-11 Score=95.89 Aligned_cols=117 Identities=20% Similarity=0.258 Sum_probs=74.9
Q ss_pred cEEEEEEcCceeEE---EEcce--eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-CceEEEEEEEec
Q psy1826 4 AQISWVRHRDIHLL---TVSGY--TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-PIGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~---~~~~~--~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-~~~~~~~l~v~~ 76 (169)
..|.|+|++.+..+ ..... ......|+..... .+...|.|.+++.+|+|.|.|.+.+. + .....+.|.|..
T Consensus 35 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~ 112 (438)
T 1qgc_4 35 SFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGS--RTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKR 112 (438)
T ss_dssp ECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECC
T ss_pred ceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEcc--CCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecC
Confidence 57999997421111 11000 0012367775432 24568999999999999999999987 3 223445666653
Q ss_pred ---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCC-eeEEEECCEEeecc
Q psy1826 77 ---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPP-AIYWLHNTEVSQLN 123 (169)
Q Consensus 77 ---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~-~i~W~~~~~~~~~~ 123 (169)
+|.+...++...+.+|+.+.|.|.+.+.+ |+| .++|+++|.++...
T Consensus 113 ~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~-p~~~~v~W~k~g~~~~~~ 162 (438)
T 1qgc_4 113 ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFY-PKDINVKWKIDGSERQNG 162 (438)
T ss_dssp CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEB-SSCEEEEEEETTEEECTT
T ss_pred CCCCCEEEecCCChhhccCCceEEEEEEcccc-CCCcEEEEEECCEEcCCC
Confidence 44444333333334688999999998853 556 99999999987654
No 164
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.33 E-value=4.7e-11 Score=91.06 Aligned_cols=108 Identities=25% Similarity=0.447 Sum_probs=76.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEeccc---
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEPI--- 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~p--- 78 (169)
..|.|+|++.. ... .....+.. ....+ .|.|.+++.+|+|.|.|.+.+. +. ....+.+.|...|
T Consensus 151 ~~v~W~~~~~~-~~~-----~~~~~~~~-~~~~~----~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~ 219 (403)
T 3laf_A 151 PTIHWQKNQQD-LNP-----IPGDSRVV-VLPSG----ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLH 219 (403)
T ss_dssp CEEEEEESSSB-CCC-----CTTCCSEE-ECTTS----CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCC
T ss_pred CeEEEEECCEe-ccc-----cCCceEEE-EcCCc----eEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcc
Confidence 37899998742 111 11223444 33344 7999999999999999999987 33 3345667776544
Q ss_pred ---eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 79 ---TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 79 ---~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+...+....+.+|+.+.|.|.+.+. |+|.+.|++++..+....
T Consensus 220 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~~~W~~~~~~~~~~~ 266 (403)
T 3laf_A 220 RQLYFLQRPSNVIAIEGKDAVLECCVSGY--PPPSFTWLRGEEVIQLRS 266 (403)
T ss_dssp EEEEEEECCCCEEEETTSCEEECCEEEEE--SCCEEEEEETTEECCCSS
T ss_pred cCceEecCCCceEecCCCcEEEEEEcCCC--CCCeEEEEECCeeccCCC
Confidence 23344566788899999999999996 456999999999876544
No 165
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.33 E-value=2.2e-11 Score=88.67 Aligned_cols=112 Identities=21% Similarity=0.309 Sum_probs=69.9
Q ss_pred CcEEEEEEcCcee---EEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEe
Q psy1826 3 LAQISWVRHRDIH---LLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~ 75 (169)
...|.|+|+..+. .+....... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+. .. ....+.|.|.
T Consensus 49 ~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~ 126 (268)
T 1x9q_A 49 NTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGS--GTDFTLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIK 126 (268)
T ss_dssp CBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC--
T ss_pred CceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcC--CCEEEEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEc
Confidence 4689999864211 111111000 12468875432 34668999999999999999999886 21 2233456665
Q ss_pred ccce-----------------------eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 76 EPIT-----------------------QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 76 ~~p~-----------------------~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.++. .+..+....+.+|+.+.|.|.+.+.+.+.+.+.|+++
T Consensus 127 ~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 190 (268)
T 1x9q_A 127 SSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQ 190 (268)
T ss_dssp ----------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGGCEEEEEEE
T ss_pred cCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCccccccEEEEEEe
Confidence 4321 2233446789999999999999986422479999974
No 166
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.33 E-value=1.6e-11 Score=83.04 Aligned_cols=78 Identities=21% Similarity=0.322 Sum_probs=59.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
.+.|.+++.+|+|.|.|.+.+. .....+.|.|..++... ..+...+.+|+.+.|.|.+.+.+ |.+.+.|++++.++.
T Consensus 52 ~~~~~~~~~~d~G~Y~C~~~~~-~~s~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~g~~~~ 128 (170)
T 3ry4_A 52 PSYRFKANNNDSGEYTCQTGQT-SLSDPVHLTVLFEWLVL-QTPHLEFQEGETIMLRCHSWKDK-PLVKVTFFQNGKSQK 128 (170)
T ss_dssp SEEEEECCGGGCEEEEEEETTS-BCCCCEEEEEECCSEEE-ECSCSEECTTCCEEEEEEEGGGC-CEEEEEEEETTEEEE
T ss_pred ceEEEecccccCeEEEEEEeCC-CceEeEEEEEECCceEe-cCCCceeecCCeEEEEEECCCCC-CCceEEEEECCeEcc
Confidence 5677899999999999999875 22334677777766544 34456788999999999996542 557999999999876
Q ss_pred c
Q psy1826 122 L 122 (169)
Q Consensus 122 ~ 122 (169)
.
T Consensus 129 ~ 129 (170)
T 3ry4_A 129 F 129 (170)
T ss_dssp E
T ss_pred c
Confidence 4
No 167
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.33 E-value=4.6e-12 Score=90.59 Aligned_cols=80 Identities=15% Similarity=0.197 Sum_probs=55.0
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe------ccceeeec-CCcEEEcCCCcEEEEEEeecCCCCCCeeEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV------EPITQIIG-GPDMYINKGSTMNLTCVIKHSPEPPPAIYW 113 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~------~~p~~~~~-~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W 113 (169)
.|.|.+++.+|+|.|.|.+.+. .... ..+.|. .+|.+... +....+ .+..+.|.|.+.+.+.|.+.++|
T Consensus 78 ~L~I~~~~~~D~g~Y~C~~~~~~~~~~--~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W 154 (231)
T 2w59_A 78 AVPVSTQDWLSGERFTCTVQHEELPLP--LSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRW 154 (231)
T ss_dssp EEECCHHHHHTTCCEEEEEECTTCSSC--EEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEecchhccCCCEEEEEEEcCCCCCc--eEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEE
Confidence 6999999999999999999987 3322 333342 34443332 222222 35579999999996323579999
Q ss_pred EECCEEeeccc
Q psy1826 114 LHNTEVSQLNL 124 (169)
Q Consensus 114 ~~~~~~~~~~~ 124 (169)
++||.++....
T Consensus 155 ~k~g~~l~~~~ 165 (231)
T 2w59_A 155 LRDHRAVPATE 165 (231)
T ss_dssp EETTEECCGGG
T ss_pred EECCEECCCcc
Confidence 99999986553
No 168
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.32 E-value=2.9e-11 Score=90.00 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=64.1
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecC-CcEEEcCCCcEEEEEEeecCCCCCCe-eEEEECCE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGG-PDMYINKGSTMNLTCVIKHSPEPPPA-IYWLHNTE 118 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~-~~~~v~~g~~~~l~C~~~~~p~p~~~-i~W~~~~~ 118 (169)
.|.|.++..+|+|.|.|.+.|. +.....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.| +|. +.|++++.
T Consensus 195 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~~i~W~~~~~ 272 (331)
T 3u83_A 195 RYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANP--PATEYHWTTLNG 272 (331)
T ss_dssp EEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEES--CCCEEEEEETTB
T ss_pred EEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCC--CCCEEEEEECCC
Confidence 6899999999999999999998 556667788887777655443 446688999999999999974 456 99999988
Q ss_pred Eeec
Q psy1826 119 VSQL 122 (169)
Q Consensus 119 ~~~~ 122 (169)
.+..
T Consensus 273 ~~~~ 276 (331)
T 3u83_A 273 SLPK 276 (331)
T ss_dssp SCCT
T ss_pred cccc
Confidence 7643
No 169
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.32 E-value=3.6e-11 Score=97.28 Aligned_cols=104 Identities=21% Similarity=0.380 Sum_probs=76.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEecccee-
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEPITQ- 80 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~p~~- 80 (169)
..|.|+|++.. +. .+.|+.....+. .|.|.++..+|+|.|.|.+.|. +. .+..+.|.|..+|..
T Consensus 318 ~~v~W~~~g~~-l~--------~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~ 384 (642)
T 1e07_A 318 TTYLWWVNNQS-LP--------VSPRLQLSNDNR----TLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDP 384 (642)
T ss_pred ccEEEEECCcc-CC--------CcCCEEEeCCCC----EEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCC
Confidence 36889988741 11 224555333334 8999999999999999999998 43 345577888766543
Q ss_pred eecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 81 IIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 81 ~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
...+....+.+|+.+.|.|.+.+. |+|.+.|+++|.++..
T Consensus 385 ~~~~~~~~~~~g~~~~l~C~~~g~--p~~~i~W~~~g~~~~~ 424 (642)
T 1e07_A 385 TISPSYTYYRPGVNLSLSCHAASN--PPAQYSWLIDGNIQQH 424 (642)
T ss_pred eecCCceEecCCCcEEEEEEcCcc--CCCeEEEEECCEEcCC
Confidence 334556788899999999999986 4569999999988753
No 170
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.32 E-value=1.5e-11 Score=91.78 Aligned_cols=80 Identities=18% Similarity=0.250 Sum_probs=55.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCc---eEEEEE--EEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPI---GISMYL--SVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~---~~~~~l--~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.|.|.....+|.|.|.|.+.|. +.. .....+ .+..+|.+...+.. +.+|+.+.|.|.+.+.|.|+..+.|++
T Consensus 181 ~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k 258 (327)
T 2wng_A 181 TAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLE 258 (327)
T ss_dssp EEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEE
T ss_pred EEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEE
Confidence 5778877778889999999997 331 223333 23445554433322 779999999999999642323899999
Q ss_pred CCEEeecc
Q psy1826 116 NTEVSQLN 123 (169)
Q Consensus 116 ~~~~~~~~ 123 (169)
||.++..+
T Consensus 259 ~g~~l~~~ 266 (327)
T 2wng_A 259 NGNVSRTE 266 (327)
T ss_dssp TTEEEEEE
T ss_pred CCeEccCc
Confidence 99988754
No 171
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.32 E-value=9.6e-12 Score=91.12 Aligned_cols=77 Identities=17% Similarity=0.251 Sum_probs=60.9
Q ss_pred EEEEcCCCCCCCe-EEEEEEEcCCC--ceEEEEEEEe----ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCe-eEE
Q psy1826 42 TLQIKYPQKRDSG-IYECQVSTTPP--IGISMYLSVV----EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPA-IYW 113 (169)
Q Consensus 42 ~L~I~~v~~~D~G-~Y~C~~~~~~~--~~~~~~l~v~----~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~-i~W 113 (169)
.|.|.+++.+|+| .|.|.+.|... .+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.| .|. +.|
T Consensus 146 ~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p--~p~~i~W 223 (290)
T 2o26_X 146 GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVS--TSVNSMW 223 (290)
T ss_dssp EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESS--TTCEEEE
T ss_pred CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCC--cceeEEE
Confidence 8999999999999 99999999722 2224566665 566666666667889999999999999864 455 999
Q ss_pred EECCEEe
Q psy1826 114 LHNTEVS 120 (169)
Q Consensus 114 ~~~~~~~ 120 (169)
++++..+
T Consensus 224 ~~~~~~~ 230 (290)
T 2o26_X 224 LKMNPQP 230 (290)
T ss_dssp EEESSSE
T ss_pred ecCCCCC
Confidence 9988763
No 172
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.32 E-value=3.3e-11 Score=86.94 Aligned_cols=108 Identities=18% Similarity=0.214 Sum_probs=72.1
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC---CCceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEE
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT---PPIGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWL 114 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~---~~~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~ 114 (169)
..|.|.+++.+|+|.|.|.+.+. ...+..+.|.|.. .|.+... +...+.+|+.+.|.|.+.+. ++.+.|+
T Consensus 60 ~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~-p~~~v~~G~~vtL~C~~~~~---~~~~~w~ 135 (242)
T 1p6f_A 60 VKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVH-PGPEVISGEKVTFYCRLDTA---TSMFLLL 135 (242)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEE-SCSEEETTCEEEEEEECTTS---CSEEEEE
T ss_pred eEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEcc-CCCccCCCCcEEEEEecCCC---CCEEEEE
Confidence 48999999999999999999764 2234456666653 3443333 34568899999999998763 3599999
Q ss_pred ECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEeeee
Q psy1826 115 HNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAGTY 163 (169)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (169)
++|..+.... . .......+. +-.+..+|.+.|++.+..
T Consensus 136 k~g~~~~~~~--~---~~~~~~~l~------I~~v~~~d~G~Y~C~a~n 173 (242)
T 1p6f_A 136 KEGRSSHVQR--G---YGKVQAEFP------LGPVTTAHRGTYRCFGSY 173 (242)
T ss_dssp ECSSSCEEEE--E---ECSSEEEEE------EEECCGGGCEEEEEEEEE
T ss_pred ECCCccCccc--c---CCCceEEEE------eCCCccccCEEEEEEEEC
Confidence 9987654311 0 011112222 445667788888887654
No 173
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.32 E-value=1e-11 Score=91.17 Aligned_cols=89 Identities=16% Similarity=0.254 Sum_probs=63.8
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC----------CCceEEEEEEEec--------------cceeee
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT----------PPIGISMYLSVVE--------------PITQII 82 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~----------~~~~~~~~l~v~~--------------~p~~~~ 82 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. ........|.|.. ++..+.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~ 144 (280)
T 3fku_X 65 QGRVTITADQSTRTAYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLT 144 (280)
T ss_dssp TTTCEEEEETTTTEEEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBB
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEE
Confidence 4688865444456779999999999999999999874 1122334566655 233344
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.++...+.+|+++.|.|.+.+.+.+.+.+.|++
T Consensus 145 ~~p~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r 177 (280)
T 3fku_X 145 QPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQ 177 (280)
T ss_dssp CCSEEEECTTCCEEEEEECCCCCCCTTCCEEEE
T ss_pred eCCcEEEecCCCEEEEEEecCCCCCCceEEEEE
Confidence 444488999999999999988432347999987
No 174
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.32 E-value=3.1e-11 Score=84.17 Aligned_cols=80 Identities=16% Similarity=0.229 Sum_probs=59.5
Q ss_pred EEEcCCCCCCCeEEEEEEEcC-CCc-eEEEEEEEecc-ceeeecCCcEEEcCCCcEEEEEEe-ecCCCCCCeeEEEECCE
Q psy1826 43 LQIKYPQKRDSGIYECQVSTT-PPI-GISMYLSVVEP-ITQIIGGPDMYINKGSTMNLTCVI-KHSPEPPPAIYWLHNTE 118 (169)
Q Consensus 43 L~I~~v~~~D~G~Y~C~~~~~-~~~-~~~~~l~v~~~-p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~~ 118 (169)
|.|.+++..|+|.|.|.+.+. +.. ...+.|.|... +.+...+....+.+|+.+.|.|.+ .+. |.|.+.|++++.
T Consensus 74 l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~--p~~~v~W~~~~~ 151 (212)
T 2v9r_A 74 IVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGH--PEPTISWKKDGS 151 (212)
T ss_dssp CCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEE--SCCEEEEEETTE
T ss_pred EEecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCC--CCCEEEEEECCc
Confidence 445677999999999999986 322 33456666543 334444567789999999999998 675 566999999999
Q ss_pred Eeeccc
Q psy1826 119 VSQLNL 124 (169)
Q Consensus 119 ~~~~~~ 124 (169)
.+....
T Consensus 152 ~l~~~~ 157 (212)
T 2v9r_A 152 PLDDKD 157 (212)
T ss_dssp EECTTS
T ss_pred cCCCCc
Confidence 887543
No 175
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.32 E-value=2.7e-11 Score=96.98 Aligned_cols=140 Identities=16% Similarity=0.129 Sum_probs=82.5
Q ss_pred cEEEEEEcCceeEEEEc-cee--ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCc-eEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVS-GYT--YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPI-GISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~-~~~--~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~-~~~~~l~v~~~p 78 (169)
..|.|+|++........ ... .....|.. ...++ +|.|.+++.+|+|.|+|.+.+. +.. ...+.|.|..+|
T Consensus 397 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~----~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~ 471 (581)
T 3o3u_N 397 QRLEWKLNTGRTEAWKVLSPQGGGPWDSVAR-VLPNG----SLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIP 471 (581)
T ss_dssp CEEEEEEEETTSSSCEECCSCCSSGGGGTSE-ECTTS----CEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCC
T ss_pred ceEEEEEcCCeeEEEEecccCCCCCcCCcEE-EcCCc----eEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCC
Confidence 47999997631111000 000 00123555 33444 8999999999999999999987 444 567788887644
Q ss_pred e--eeecCCcEEEcCCCcE-EEEEEeecCCCCCCeeEEEECCEEeecccccceeeccee---eEEEEEEEEeeEEEEe
Q psy1826 79 T--QIIGGPDMYINKGSTM-NLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSF---VKRLVVLLSVSIVELT 150 (169)
Q Consensus 79 ~--~~~~~~~~~v~~g~~~-~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 150 (169)
. .+...... +.++... .|.|.+.+. .|.|.++|+++|.++.............. ...+....+.|.+...
T Consensus 472 ~~p~i~~~~~~-~~~~~~~~~l~C~~~~~-~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~ 547 (581)
T 3o3u_N 472 GKPEIVDSASE-LTAGVPNKVGTCVSEGS-YPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPA 547 (581)
T ss_dssp CCCEEESCCSE-ECTTSCEEEEEEEEEEE-BSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCC
T ss_pred CCCEEEcCCcc-cccCCceeEEEEECCCC-CCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEec
Confidence 2 22222233 5555554 669999884 25679999999999876433321111110 1223445566777653
No 176
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.31 E-value=1.1e-11 Score=92.74 Aligned_cols=132 Identities=17% Similarity=0.137 Sum_probs=82.6
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCe-EEEEEEEcC-CCceEEEEEEE-ecccee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSG-IYECQVSTT-PPIGISMYLSV-VEPITQ 80 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C~~~~~-~~~~~~~~l~v-~~~p~~ 80 (169)
..|.|+|++..... . .|. ...+ .|.|.+++.+|+| .|.|.+.+. +.......+.+ ..+|.+
T Consensus 68 ~~v~W~k~~~~~~~--------~-~~~---~~~~----~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~ 131 (329)
T 3oq3_B 68 NVVNWEKIGKTRRP--------L-NRR---VKNG----DLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSC 131 (329)
T ss_dssp CEEEEEECSSSCEE--------C-STT---EETT----EEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSC
T ss_pred CeeEEEECCCCccc--------c-Cce---eecc----eEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcE
Confidence 58999998752221 1 222 1244 8999999999999 999999997 44333332233 344443
Q ss_pred eecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEe
Q psy1826 81 IIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILA 160 (169)
Q Consensus 81 ~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (169)
........+.+|+.+.|.|.+.+.| +.|.+.|++++.++..+....... ...+. +.....+|.+.|.+.
T Consensus 132 ~~~~~~~~~~~G~~v~L~C~~~g~p-~~~~i~W~k~~~~l~~~~~~~~~~----~~~L~------I~~v~~~D~G~Y~C~ 200 (329)
T 3oq3_B 132 IPETYELGTHDKYGIDLYCGILYAK-HYNNITWYKNNQELIIDGTKYSQS----GQNLI------IHNPELEDSGRYDCY 200 (329)
T ss_dssp EEEEEETTSSTTTCEEEECCCCSCC-CCCEEEEEETTEECCCSSSSEEEE----TTEEE------ECSCCGGGCEEEEEE
T ss_pred eccccceEEeCCCcEEEEeccCCCC-CCceEEEEECCccCCCCCceEecC----CCEEE------EeecChhhCEEEEEE
Confidence 3322233466799999999999964 167999999999885443222211 11122 334455666677666
Q ss_pred ee
Q psy1826 161 GT 162 (169)
Q Consensus 161 ~~ 162 (169)
..
T Consensus 201 a~ 202 (329)
T 3oq3_B 201 VH 202 (329)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 177
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.31 E-value=4.8e-12 Score=91.13 Aligned_cols=111 Identities=16% Similarity=0.173 Sum_probs=68.1
Q ss_pred cEEEEEEcCceeEEEEcc--eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEE----EEec
Q psy1826 4 AQISWVRHRDIHLLTVSG--YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYL----SVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l----~v~~ 76 (169)
+.|.|+|++. ....... .....+.++.. ...|.|.+++.+|+|.|.|.+.+. +.......+ .+..
T Consensus 51 ~~v~W~k~~~-~~~~~~~~~~~~~~~~~~~~-------~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~ 122 (239)
T 1i1c_A 51 VRFSWFIDDV-EVHTAQTHAPEKQSNSTLRS-------VSELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISKPEGTPR 122 (239)
T ss_dssp CEEEEEESSC-EECCCEECCCEECTTSCEEE-------EEEEECCHHHHHTTCCEEEEEECSSSSSCEEEEECCCSSCCB
T ss_pred CEEEEEECCc-cccCcccccceEcCCCcEEE-------EEEEEEEhhHccCCCeEEEEEecccCCCCcEEEEecCCCCCc
Confidence 5899999874 2221100 00112233331 227999999999999999999987 432222222 2334
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
+|.+...+.......|+.+.|.|.+.|.+.++..++|++||.++..
T Consensus 123 ~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 168 (239)
T 1i1c_A 123 GPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQEN 168 (239)
T ss_dssp CCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSS
T ss_pred CCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCC
Confidence 5554443332222347889999999985323468999999998753
No 178
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.31 E-value=3.9e-11 Score=82.73 Aligned_cols=108 Identities=18% Similarity=0.260 Sum_probs=68.9
Q ss_pred CcEEEEEEcCceeEEEEcce----eecCC--CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEec
Q psy1826 3 LAQISWVRHRDIHLLTVSGY----TYTSD--QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVE 76 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~----~~~~~--~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~ 76 (169)
...|.|+|.+...+...... .+... .|+.+...++ +|.|.+++.+|+|.|.|.+.+.......+.|.|..
T Consensus 29 ~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~----sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~L~V~~ 104 (180)
T 2dru_A 29 YQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNG----ALRIYNVSKEDRGDYYMRMLHETEDQWKITMEVYE 104 (180)
T ss_dssp CSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTC----CEEECSCCGGGCEEEEEEEESSSEEEEEEEEEEEC
T ss_pred eeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCc----cEEEcCCCHHHCeEEEEEEEcCCeEEEEEEEEEEC
Confidence 46899998532223222111 11122 5777423444 89999999999999999997755334456677765
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
++. .+.+.+ .+..+.|.|.+... |.|.+.|++++.++.
T Consensus 105 ~~~----~P~i~~-~~~~v~L~C~~~~g--p~p~i~W~~~~~~l~ 142 (180)
T 2dru_A 105 MVS----KPMIYW-ECSNATLTCEVLEG--TDVELKLYQGKEHLR 142 (180)
T ss_dssp CCC----CCEEEE-EGGGTEEEEECSSC--TTCEEEEEETTEEEE
T ss_pred CCC----CCEEEe-cCCCEEEEEEeCCC--CCCEEEEEECCeECc
Confidence 421 122222 34669999999443 467999999998875
No 179
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.30 E-value=4.6e-12 Score=94.57 Aligned_cols=80 Identities=18% Similarity=0.246 Sum_probs=54.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe------ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV------EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWL 114 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~------~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~ 114 (169)
.|.|.+++.+|+|.|.|.+.|. .... ..+.|. .+|.+...+.......|+.+.|.|.+.+.+.|++.+.|+
T Consensus 179 ~L~I~~~~~~D~G~Y~C~a~n~~~~~~--~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~ 256 (323)
T 2wqr_A 179 TLPVGTRDWIEGETYQCRVTHPHLPRA--LMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWL 256 (323)
T ss_dssp EEECCHHHHHTTCCEEEEEECTTSSSC--EEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEECHHHccCCCCEEEEEECCCCCCC--eeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEE
Confidence 7999999999999999999987 2222 233332 344433322221122399999999999853234589999
Q ss_pred ECCEEeecc
Q psy1826 115 HNTEVSQLN 123 (169)
Q Consensus 115 ~~~~~~~~~ 123 (169)
+||.++...
T Consensus 257 k~g~~l~~~ 265 (323)
T 2wqr_A 257 HNEVQLPDA 265 (323)
T ss_dssp ETTEECCGG
T ss_pred ECCEECCCC
Confidence 999988654
No 180
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.30 E-value=4.1e-11 Score=86.69 Aligned_cols=78 Identities=17% Similarity=0.291 Sum_probs=58.8
Q ss_pred CCeEEEEEcCCCCCCCeEEEEEEEcC-C---CceEEEEEEEecc-----------------ceeeecCCcEEEcCCCcEE
Q psy1826 38 NEDWTLQIKYPQKRDSGIYECQVSTT-P---PIGISMYLSVVEP-----------------ITQIIGGPDMYINKGSTMN 96 (169)
Q Consensus 38 ~~~~~L~I~~v~~~D~G~Y~C~~~~~-~---~~~~~~~l~v~~~-----------------p~~~~~~~~~~v~~g~~~~ 96 (169)
...+.|.|.+++.+|+|.|.|.+.+. + .......|.|..+ +.+...+..+.+.+|+.+.
T Consensus 76 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~ 155 (259)
T 3omz_A 76 RKNLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVT 155 (259)
T ss_dssp -CCCEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEE
T ss_pred CCeEEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEE
Confidence 35568999999999999999999886 3 2333456777653 3444556678899999999
Q ss_pred EEEEeecCCCCCCeeEEEEC
Q psy1826 97 LTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 97 l~C~~~~~p~p~~~i~W~~~ 116 (169)
|.|.+.+. .|.+.+.|+++
T Consensus 156 L~C~~~~~-~~~~~v~W~k~ 174 (259)
T 3omz_A 156 LNCLYETS-WWSYYIFWYKR 174 (259)
T ss_dssp ECCEEECC-CSSCEEEEEEE
T ss_pred EEEECCCc-cCCceEEEeee
Confidence 99988874 25679999984
No 181
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.30 E-value=1.4e-11 Score=89.04 Aligned_cols=96 Identities=19% Similarity=0.286 Sum_probs=64.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC----CCceEEEEEEEec------cceeeec-CCcEEEcCCCcE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT----PPIGISMYLSVVE------PITQIIG-GPDMYINKGSTM 95 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~----~~~~~~~~l~v~~------~p~~~~~-~~~~~v~~g~~~ 95 (169)
..|+.+.... .+.+.|.|.+++.+|+|.|.|.+.+. ........|.|.. +|.+... +....+.+|+.+
T Consensus 63 ~~R~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~ 141 (252)
T 1oga_E 63 AEGYSVSREK-KESFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKA 141 (252)
T ss_dssp CTTEEECCSS-TTBCCEEECSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEE
T ss_pred CCcEEEEecC-CCEEEEEECcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCce
Confidence 4688754322 34558999999999999999999884 1112234566653 3433332 223334578999
Q ss_pred EEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 96 NLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 96 ~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.|.|.+.+.+.+++.+.|+++|.++...
T Consensus 142 ~L~C~~~g~~P~~~~v~W~~~g~~l~~~ 169 (252)
T 1oga_E 142 TLVCLATGFYPDHVELSWWVNGKEVHSG 169 (252)
T ss_dssp EEEEEEEEEBSSCEEEEEEETTEEECSS
T ss_pred EEEEEEeeEcCCCcEEEEEECCEECCCC
Confidence 9999999862123599999999987643
No 182
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.30 E-value=5.7e-11 Score=81.23 Aligned_cols=106 Identities=16% Similarity=0.293 Sum_probs=68.7
Q ss_pred cEEEEEEcCceeEEEEcceee----cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTY----TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
..|.|+|.+. .+........ ....|+.+...++ +|.|.+++.+|+|.|.|.+.+... ...+.|.|..++.
T Consensus 24 ~~i~W~~~~~-~i~~~~~~~~~~~~~~~~R~~~~~~~~----sL~I~~v~~~DsG~Y~C~~~n~~~-~~~~~L~V~~~~~ 97 (171)
T 1ccz_A 24 KEVLWKKQKD-KVAELENSEFRAFSSFKNRVYLDTVSG----SLTIYNLTSSDEDEYEMESPNITD-TMKFFLYVLEMVS 97 (171)
T ss_dssp SCEEEEETTE-EEEEEETTEEEECGGGTTSEEECTTTC----CEEECSCCGGGCEEEEEECTTCCS-CEEEEEEEECCCC
T ss_pred ceEEEEeCCc-EEEEEcCCCcccccccCCcEEEeCCCC----eEEECCCChhhCceEEEEEeCCCC-cEEEEEEEECcCC
Confidence 4789999874 2222211110 1234666433445 899999999999999999988622 6677888876532
Q ss_pred eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 80 QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 80 ~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
.+.+..... ...|.|.+.+. |.|.+.|++++.++..
T Consensus 98 ----~p~i~~~~~-~~~L~C~~~~~--p~p~i~W~~~~~~l~~ 133 (171)
T 1ccz_A 98 ----KPMIYWECS-NATLTCEVLEG--TDVELKLYQGKEHLRS 133 (171)
T ss_dssp ----CCEEEEETT-TTEEEEECSSC--SSCEEEEEETTEEEEE
T ss_pred ----CCEEEEecC-CcEEEEEeCCC--CCcEEEEEECCEECcC
Confidence 111111111 13799999986 4579999999998763
No 183
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.30 E-value=4.3e-11 Score=99.33 Aligned_cols=109 Identities=20% Similarity=0.346 Sum_probs=81.1
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
-+|.|+|++....... ....+.|.. ...+ .|.|.+++.+|+|.|.|.+.|. +.....+.|.|..++.+..
T Consensus 278 p~v~W~k~~~~~~~~~---~~~~~~~~~--~~~~----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~ 348 (816)
T 3dmk_A 278 PVFRWYKFIEGTTRKQ---AVVLNDRVK--QVSG----TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKI 348 (816)
T ss_dssp CEEEEEEECTTSSCEE---ECCCSSSEE--EETT----EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEE
T ss_pred CeEEEEeCCCCCccCc---ceecCCceE--eccc----eEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceee
Confidence 4689998643211111 111234444 2234 8999999999999999999998 6666677788887777666
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+....+.+|+.+.|.|.+.+. |.+.+.|+++|.++...
T Consensus 349 ~~~~~~v~~G~~v~l~C~~~g~--p~~~v~W~k~g~~~~~~ 387 (816)
T 3dmk_A 349 DPPTQTVDFGRPAVFTCQYTGN--PIKTVSWMKDGKAIGHS 387 (816)
T ss_dssp ESSEEECCTTSCEEEEEEEEEE--CCCEEEEEETTEECSCC
T ss_pred CCCceEecCCCCEEEEEEEecc--CCCEEEEEECCEECCCC
Confidence 7778889999999999999986 45699999999987643
No 184
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.30 E-value=8.3e-12 Score=90.22 Aligned_cols=91 Identities=15% Similarity=0.231 Sum_probs=60.0
Q ss_pred CeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C------CceEEEEEEEec------cceeeec-CCcEEEcCCCc
Q psy1826 29 RFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P------PIGISMYLSVVE------PITQIIG-GPDMYINKGST 94 (169)
Q Consensus 29 r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~------~~~~~~~l~v~~------~p~~~~~-~~~~~v~~g~~ 94 (169)
|+.+..... .. |.|.+++.+|+|.|.|.+.+. + .......|.|.. +|.+... +....+.+|+.
T Consensus 65 R~~~~~~~~-~~--L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~ 141 (253)
T 3to4_D 65 DYLATRVTD-TE--LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQK 141 (253)
T ss_dssp EEEEECCSS-SC--CEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSE
T ss_pred cEEEEeCCC-Ce--EEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCc
Confidence 777544322 11 999999999999999999864 2 112234566653 3332222 22223345789
Q ss_pred EEEEEEeecCCCCCC-eeEEEECCEEeecc
Q psy1826 95 MNLTCVIKHSPEPPP-AIYWLHNTEVSQLN 123 (169)
Q Consensus 95 ~~l~C~~~~~p~p~~-~i~W~~~~~~~~~~ 123 (169)
+.|.|.+.+.+ |++ .++|+++|.++...
T Consensus 142 ~~L~C~~~g~~-P~~i~v~W~k~g~~l~~~ 170 (253)
T 3to4_D 142 ATLVCLATGFY-PDHVELSWWVNGKEVHSG 170 (253)
T ss_dssp EEEEEEEEEEB-SSCEEEEEEETTEEECTT
T ss_pred eEEEEEEceEE-CCcEEEEEEECCEECCCc
Confidence 99999999963 445 89999999988654
No 185
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=5.9e-12 Score=95.04 Aligned_cols=80 Identities=14% Similarity=0.143 Sum_probs=62.6
Q ss_pred CeEEEEEcCCCCCCCe-EEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 39 EDWTLQIKYPQKRDSG-IYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G-~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
....|.|.+++.+|+| .|.|.+.+. +.....+.|.|..+|.+ . ...+.+|+.+.|.|.+.|. |.|.+.|+++
T Consensus 210 ~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i-~---~~~~~~g~~v~l~C~~~g~--P~p~i~W~~~ 283 (347)
T 2ifg_A 210 PSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASV-Q---LHTAVEMHHWCIPFSVDGQ--PAPSLRWLFN 283 (347)
T ss_dssp SEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEE-E---ECCCEESSSEEEEEEEEEE--SCCEEEEEET
T ss_pred ccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee-e---eccCccCceEEEEEEeeec--CCCcEEEEeC
Confidence 3448999999999999 999999987 55566677777777764 1 1123578999999999997 4569999999
Q ss_pred CEEeeccc
Q psy1826 117 TEVSQLNL 124 (169)
Q Consensus 117 ~~~~~~~~ 124 (169)
|.++....
T Consensus 284 g~~l~~~~ 291 (347)
T 2ifg_A 284 GSVLNETS 291 (347)
T ss_dssp TEECCCCS
T ss_pred CEECCCCc
Confidence 99887443
No 186
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.29 E-value=1.3e-10 Score=84.58 Aligned_cols=79 Identities=15% Similarity=0.160 Sum_probs=57.5
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-C-----CceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCee
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-P-----PIGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~-----~~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i 111 (169)
..|.|.+++.+|+|.|.|.+.+. . ..+..+.|.|.. +|.+... +...+.+|+++.|.|.+.+. ++.+
T Consensus 62 ~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~-p~~~V~~G~~vtL~C~~~~~---~~~~ 137 (257)
T 1b6u_A 62 ANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQ-PGPTVLAGESVTLSCSSRSS---YDMY 137 (257)
T ss_dssp EEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECS-SCTTCBTTCEEEEEEECSSC---CSEE
T ss_pred EEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEcc-CCCccCCCCEEEEEEeCCCC---CcEE
Confidence 38999999999999999999753 1 223456677764 2343333 33457899999999998774 3599
Q ss_pred EEEECCEEeecc
Q psy1826 112 YWLHNTEVSQLN 123 (169)
Q Consensus 112 ~W~~~~~~~~~~ 123 (169)
.|+++|..+...
T Consensus 138 ~w~k~g~~~~~~ 149 (257)
T 1b6u_A 138 HLSREGEAHERR 149 (257)
T ss_dssp EEEETTSSCEEC
T ss_pred EEEECCcccCcc
Confidence 999999876543
No 187
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.29 E-value=3.9e-11 Score=87.83 Aligned_cols=77 Identities=16% Similarity=0.252 Sum_probs=63.0
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEE-EECCEEe
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYW-LHNTEVS 120 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W-~~~~~~~ 120 (169)
.|.|.+++.+|+|.|.|.+.+ +. ...+.|.|..+|.....+....+.+|+.+.|.|.+.+ |. .+.+.| .++|.++
T Consensus 58 ~L~i~~~~~~d~G~Y~C~~~n-g~-~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~-~~~v~W~~~~g~~l 133 (290)
T 2o26_X 58 EWIQEKAEATRTGTYTCSNSN-GL-TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQ-VSQYSLIECDGKSL 133 (290)
T ss_dssp EEEETTCCGGGCEEEEEEESS-SC-EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CS-CEEEEEEETTSCCC
T ss_pred eEEEeccCHHhCeEEEEEeeC-Cc-cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CC-CceEEEEeCCCcCC
Confidence 899999999999999999998 43 6778888888776555566788899999999999985 32 279999 4688776
Q ss_pred ec
Q psy1826 121 QL 122 (169)
Q Consensus 121 ~~ 122 (169)
..
T Consensus 134 ~~ 135 (290)
T 2o26_X 134 PT 135 (290)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 188
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.29 E-value=7.4e-11 Score=84.80 Aligned_cols=81 Identities=16% Similarity=0.217 Sum_probs=60.3
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec--cceeeecCCcEEEcCCCcEEEEEEeecCCC-CCC--eeEEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE--PITQIIGGPDMYINKGSTMNLTCVIKHSPE-PPP--AIYWLH 115 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~--~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~-p~~--~i~W~~ 115 (169)
.|.|.+++.+|+|.|.|.+.+. +.....+.|.|.. ++..+...+...+.+|+.+.|.|.+.+.|. |.. .+.|++
T Consensus 132 ~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~ 211 (262)
T 3rjd_A 132 NLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYM 211 (262)
T ss_dssp CEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEE
T ss_pred eEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEe
Confidence 7999999999999999999987 4455556777764 233343344566889999999999999753 222 478999
Q ss_pred CCEEeec
Q psy1826 116 NTEVSQL 122 (169)
Q Consensus 116 ~~~~~~~ 122 (169)
++..+..
T Consensus 212 ~~~~~~~ 218 (262)
T 3rjd_A 212 GSKTLRG 218 (262)
T ss_dssp TTEEEEE
T ss_pred CCcEecc
Confidence 9988763
No 189
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.29 E-value=5.2e-11 Score=86.13 Aligned_cols=86 Identities=19% Similarity=0.351 Sum_probs=57.6
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecC-C
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHS-P 105 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p 105 (169)
.|+.+......++..|.|.+++.+|+|.|.|.+.+. ........+.+.+.+ ..+....+.+|+.+.|.|.+.+. +
T Consensus 71 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~---~~p~~~~v~~G~~v~L~C~~~~~~~ 147 (268)
T 3mj6_A 71 NRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP---EEPRDLRVRVGDTTQMRCSIQSTEE 147 (268)
T ss_dssp TTEEECSCTTTTBCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC---CCCSEEEEETTCCEEECCBCEESSS
T ss_pred CceEEeecCCCCEEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec---cCCCccccccCCcEEEEEEecCCCC
Confidence 566532222234458999999999999999999886 333333333333221 13346788999999999999431 2
Q ss_pred CCCCeeEEEEC
Q psy1826 106 EPPPAIYWLHN 116 (169)
Q Consensus 106 ~p~~~i~W~~~ 116 (169)
.|.|.+.|+++
T Consensus 148 ~p~~~v~W~~~ 158 (268)
T 3mj6_A 148 KRVTKVNWMFS 158 (268)
T ss_dssp SCCCEEEEEEE
T ss_pred CCccceEEEec
Confidence 46789999983
No 190
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.28 E-value=5.5e-12 Score=94.37 Aligned_cols=107 Identities=15% Similarity=0.251 Sum_probs=75.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceee-
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQI- 81 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~- 81 (169)
..|.|+|++....+... ...|+. ..++ .|.|.+++.+|+|.|.|.+.+. +.....+.|.|..++...
T Consensus 55 ~~v~W~k~~~~~~~~~~-----~~~~~~--~~~~----~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~ 123 (339)
T 3o4o_C 55 INLTWHKNDSARTVPGE-----EETRMW--AQDG----ALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFL 123 (339)
T ss_dssp CBCCCEESSCCSCCSCC-----SSSCEE--EETT----EEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGH
T ss_pred ceEEEEECCCCcccCcc-----ccccEE--eeCC----eEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccc
Confidence 47899998742112110 123444 3344 8999999999999999999987 556667778887655422
Q ss_pred -ecCCcEEEcCCCcEEEEEE-----eecCCCCCCeeEEEECCEEeecc
Q psy1826 82 -IGGPDMYINKGSTMNLTCV-----IKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 82 -~~~~~~~v~~g~~~~l~C~-----~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.......+.+|+.+.|.|. +.+. |.+.+.|++++.++..+
T Consensus 124 ~~~~~~~~~~~g~~v~l~C~~~~~~~~g~--p~~~v~W~k~g~~~~~~ 169 (339)
T 3o4o_C 124 PFISYPQILTLSTSGVLVCPDLSEFTRDK--TDVKIQWYKDSLLLDKD 169 (339)
T ss_dssp HHHCEEEEEETTSCEEEECCSCTTTCCSS--SCCCBCCEESSCBCCTT
T ss_pred cccccceEEECCCCEEEEecCCcccccCC--CCceEEEecCCeeCCCC
Confidence 1122357889999999999 6664 56799999999887655
No 191
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.28 E-value=1.4e-11 Score=86.36 Aligned_cols=115 Identities=21% Similarity=0.313 Sum_probs=72.2
Q ss_pred CcEEEEEEcCcee----EEEEcc----eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-Cc----eEE
Q psy1826 3 LAQISWVRHRDIH----LLTVSG----YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-PI----GIS 69 (169)
Q Consensus 3 ~~~V~W~k~~~~~----~~~~~~----~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-~~----~~~ 69 (169)
...|.|+|++... +..... .......|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .. ...
T Consensus 36 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~ 115 (214)
T 2zg1_A 36 PLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNK 115 (214)
T ss_dssp CEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSC
T ss_pred ceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCCc
Confidence 4679999986421 111000 0011236777433222345589999999999999999998863 11 135
Q ss_pred EEEEEeccc--eeeecCCcEEEcCCCcEEEEEEeecC-C-CCCCeeEEEECCEE
Q psy1826 70 MYLSVVEPI--TQIIGGPDMYINKGSTMNLTCVIKHS-P-EPPPAIYWLHNTEV 119 (169)
Q Consensus 70 ~~l~v~~~p--~~~~~~~~~~v~~g~~~~l~C~~~~~-p-~p~~~i~W~~~~~~ 119 (169)
+.|.|..++ +.+..+. .+.+|+.+.|.|.+.+. | .|+|.++|++++..
T Consensus 116 ~~l~V~~~~~~p~i~~~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~ 167 (214)
T 2zg1_A 116 LNLEVTALIEKPDIHFLE--PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALS 167 (214)
T ss_dssp EEEEEECCCCCCEEC--C--CCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTS
T ss_pred eEEEEecCCCCCceecCc--cccCCCeEEEEEEeccCCCCCCCceEEEeCCCCc
Confidence 677776532 1122222 26789999999999874 1 26789999998854
No 192
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.28 E-value=3.1e-11 Score=87.40 Aligned_cols=91 Identities=20% Similarity=0.322 Sum_probs=59.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC------------CceEEEEEEEec----cceeeecCCcEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP------------PIGISMYLSVVE----PITQIIGGPDMYIN 90 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~------------~~~~~~~l~v~~----~p~~~~~~~~~~v~ 90 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.+ .....+.|.|.. +|.+....+...+.
T Consensus 88 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~ 167 (256)
T 3sob_H 88 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKST 167 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC----
T ss_pred CCcEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccc
Confidence 46888655544567789999999999999999998632 122334566642 33433334444567
Q ss_pred CCCcEEEEEEeecCCCCCCeeEEEECCEE
Q psy1826 91 KGSTMNLTCVIKHSPEPPPAIYWLHNTEV 119 (169)
Q Consensus 91 ~g~~~~l~C~~~~~p~p~~~i~W~~~~~~ 119 (169)
+|+.+.|.|.+.+.+.+++.+.| ++..
T Consensus 168 ~g~~v~L~C~~~~~~p~~~~v~W--~~~~ 194 (256)
T 3sob_H 168 SGGTAALGCLVKDYFPEPVTVSW--NSGA 194 (256)
T ss_dssp -TTEEEEEEEEEEEBSSCCEEEE--GGGT
T ss_pred cCCcEEEEEEEEEEECCCeEEEE--CCcc
Confidence 89999999999985323568999 5443
No 193
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.28 E-value=4.1e-11 Score=91.64 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=58.5
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEE----EEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYL----SVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l----~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.|.|.+++.+|+|.|.|++.+. ........+ .+..+|.+...+......+|+.+.|.|.+.+...|.+.|+|++|
T Consensus 234 ~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~ 313 (376)
T 2aty_A 234 ELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWN 313 (376)
T ss_pred EEEechHhccCCCEEEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEEC
Confidence 7999999999999999999887 322222222 33456665555554444568899999999996434679999999
Q ss_pred CEEeec
Q psy1826 117 TEVSQL 122 (169)
Q Consensus 117 ~~~~~~ 122 (169)
|.++..
T Consensus 314 g~~~~~ 319 (376)
T 2aty_A 314 GQPAEN 319 (376)
T ss_pred CEECCC
Confidence 988743
No 194
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.28 E-value=2.7e-12 Score=96.10 Aligned_cols=106 Identities=19% Similarity=0.370 Sum_probs=75.9
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C----CceEEEEEEEec--
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P----PIGISMYLSVVE-- 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~----~~~~~~~l~v~~-- 76 (169)
..|.|+|++. .+. ....++......+ .|.|.+++.+|+|.|.|.+.|. + .....+.|.|..
T Consensus 155 ~~v~W~k~g~--~~~------~~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~ 222 (339)
T 3o4o_C 155 VKIQWYKDSL--LLD------KDNEKFLSVRGTT----HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKK 222 (339)
T ss_dssp CCBCCEESSC--BCC------TTCSSEEECTTSS----EEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCC
T ss_pred ceEEEecCCe--eCC------CCCceeEEcCCcc----eEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCC
Confidence 4688999764 221 1224555333233 8999999999999999999987 3 245567777764
Q ss_pred ---cceeeecCCcEEEcCCCcEEEEEEe---ecCCCCCCeeEEEECCEEeec
Q psy1826 77 ---PITQIIGGPDMYINKGSTMNLTCVI---KHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 77 ---~p~~~~~~~~~~v~~g~~~~l~C~~---~~~p~p~~~i~W~~~~~~~~~ 122 (169)
+|.++..+....+.+|+.+.|.|.+ .+.| +++.+.|++++.++..
T Consensus 223 ~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P-~~~~v~W~~~g~~~~~ 273 (339)
T 3o4o_C 223 EETIPVIISPLKTISASLGSRLTIPCKVFLGTGTP-LTTMLWWTANDTHIES 273 (339)
T ss_dssp CCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCC-SSCEEEEESSSSCSSS
T ss_pred CCCCCEEecCCceeEeccCCCEEEEEEEECCCCCC-CCceEEEEECCeeccc
Confidence 3454544556778899999999999 7864 2679999999987654
No 195
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.28 E-value=1.3e-11 Score=86.62 Aligned_cols=79 Identities=19% Similarity=0.214 Sum_probs=47.9
Q ss_pred EEEcCCCCCCCeEEEEEEEcC-CCceEEEEE----EEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECC
Q psy1826 43 LQIKYPQKRDSGIYECQVSTT-PPIGISMYL----SVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNT 117 (169)
Q Consensus 43 L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l----~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~ 117 (169)
|.|......|+|.|.|.+.+. +.......+ .+..+|.+...+.......|..+.|.|.+.|.+.+++.++|+++|
T Consensus 70 l~i~~~d~~d~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g 149 (207)
T 1l6x_A 70 LTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNG 149 (207)
T ss_dssp EECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred EEEEHHHccCCceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECC
Confidence 333333334599999999987 433222233 223455544333221112456699999999963234599999999
Q ss_pred EEee
Q psy1826 118 EVSQ 121 (169)
Q Consensus 118 ~~~~ 121 (169)
.++.
T Consensus 150 ~~~~ 153 (207)
T 1l6x_A 150 QPEN 153 (207)
T ss_dssp EEEC
T ss_pred eecc
Confidence 9875
No 196
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.27 E-value=1.5e-10 Score=86.11 Aligned_cols=87 Identities=23% Similarity=0.431 Sum_probs=63.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc-C-CCceEEEEEEEeccceeee--cCCcEEEcCC---CcEEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST-T-PPIGISMYLSVVEPITQII--GGPDMYINKG---STMNLTC 99 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~-~-~~~~~~~~l~v~~~p~~~~--~~~~~~v~~g---~~~~l~C 99 (169)
..|+.+. ........|.|.+++.+|+|.|.|.+.+ . +.....+.|.|..+|.+.. .+....+.+| +.+.|.|
T Consensus 79 ~~r~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C 157 (331)
T 3u83_A 79 RERVEFL-RPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATC 157 (331)
T ss_dssp TTTEEES-SCSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEE
T ss_pred CCceEec-ccCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEE
Confidence 3576643 2223445899999999999999998544 3 4556677888887776533 4556788888 7799999
Q ss_pred E-eecCCCCCCeeEEEEC
Q psy1826 100 V-IKHSPEPPPAIYWLHN 116 (169)
Q Consensus 100 ~-~~~~p~p~~~i~W~~~ 116 (169)
. ..+. |.|.+.|+++
T Consensus 158 ~~~~~~--p~~~i~W~~~ 173 (331)
T 3u83_A 158 TSANGK--PPSVVSWETR 173 (331)
T ss_dssp EEEEEB--SCCEEEEEES
T ss_pred EecCCc--CCceEEEEcC
Confidence 7 6675 5679999985
No 197
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.27 E-value=2.1e-12 Score=95.51 Aligned_cols=137 Identities=15% Similarity=0.136 Sum_probs=75.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++. .+. ...++.... +...|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.+..
T Consensus 37 ~~v~W~~~~~--~~~-------~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~ 103 (317)
T 2y25_A 37 THIVWYKDER--EIS-------VDEKHDFKD----GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMM 103 (317)
T ss_dssp CEEEEEETTE--EEC-------CSCC---------CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHHHHHHH
T ss_pred CEEEEEECCe--EcC-------CCCcEEEEC----CeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecCccccc
Confidence 5799999873 221 123443222 2348999999999999999999987 5444444443333332222
Q ss_pred cCCcEEEcCCCcEEEEEEeec---------CCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeec
Q psy1826 83 GGPDMYINKGSTMNLTCVIKH---------SPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKL 153 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~---------~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (169)
.+....+.+|..+.|.|.+.+ . .|.+.+.|++++.++..+........ .....+. +.....+|
T Consensus 104 ~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~-~p~~~i~W~~~~~~~~~~~~~~~~~~-~~~~~L~------i~~~~~~d 175 (317)
T 2y25_A 104 EVCKKIALSATDLKIQSTAEGIQLYSFVTYY-VEDLKVNWSHNGSAIRYSDRVKTGVT-GEQIWLQ------INEPTPND 175 (317)
T ss_dssp HHHHHHHTCBCCCEEEECSSEEEEEEEBSSC-CSSCEEEEEESSSBCCCCSSEEEEEC-SSEEEEE------EESCCGGG
T ss_pred cCCceecccCCCeEEEeeccccEEEEEeccC-CCCcEEEEEECCEECCCCCCeEEecc-CCEEEEE------ECcCCccc
Confidence 222233445555555555444 2 25679999999988765433222111 1111122 33445566
Q ss_pred eeeEEEee
Q psy1826 154 EATYILAG 161 (169)
Q Consensus 154 ~~~~~~~~ 161 (169)
.+.|.+..
T Consensus 176 ~G~Y~C~a 183 (317)
T 2y25_A 176 KGKYVMEL 183 (317)
T ss_dssp CEEEEEEE
T ss_pred CeeEEEEE
Confidence 66776654
No 198
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.27 E-value=1.3e-11 Score=87.96 Aligned_cols=87 Identities=20% Similarity=0.208 Sum_probs=58.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC----------CceEEEEEEEec----cceeeecCCcEEEcCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP----------PIGISMYLSVVE----PITQIIGGPDMYINKG 92 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~----------~~~~~~~l~v~~----~p~~~~~~~~~~v~~g 92 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .....+.|.|.. +|.+...++...+.+|
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g 144 (226)
T 3mlr_H 65 EGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSG 144 (226)
T ss_dssp BTTBEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTS
T ss_pred CCcEEEEecCCCCEEEEEECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCC
Confidence 36888665444467789999999999999999986631 111223555542 2333322233345689
Q ss_pred CcEEEEEEeecCCCCCCeeEE
Q psy1826 93 STMNLTCVIKHSPEPPPAIYW 113 (169)
Q Consensus 93 ~~~~l~C~~~~~p~p~~~i~W 113 (169)
+.+.|.|.+.+.+.+++.+.|
T Consensus 145 ~~~~l~C~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 145 GTAALGCLVKDYFPEPVTVSW 165 (226)
T ss_dssp SEEEEEEEEEEEBSSCCEEEE
T ss_pred CCEEEEEEEEEEECCCeEEEE
Confidence 999999999986423578999
No 199
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.27 E-value=1.8e-11 Score=89.33 Aligned_cols=87 Identities=20% Similarity=0.282 Sum_probs=56.4
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC---------CceEEEEEEEe----ccceeeecCCcEEEcCCC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP---------PIGISMYLSVV----EPITQIIGGPDMYINKGS 93 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~---------~~~~~~~l~v~----~~p~~~~~~~~~~v~~g~ 93 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .....+.|.|. .+|.+....+...+.+|+
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~ 143 (263)
T 3iu4_H 64 KSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSG 143 (263)
T ss_dssp TTCEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----
T ss_pred CCCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCC
Confidence 47888655444467789999999999999999997642 11223456664 233433223333345789
Q ss_pred cEEEEEEeecCCCCCCeeEE
Q psy1826 94 TMNLTCVIKHSPEPPPAIYW 113 (169)
Q Consensus 94 ~~~l~C~~~~~p~p~~~i~W 113 (169)
.+.|.|.+.+.+.+++.++|
T Consensus 144 ~~~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 144 TAALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp EEEEEEEEEEEBSSCCEEEE
T ss_pred cEEEEEEEEeEeCCceEEEE
Confidence 99999999986422478999
No 200
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.27 E-value=2.3e-10 Score=89.63 Aligned_cols=91 Identities=11% Similarity=0.202 Sum_probs=63.3
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C------CceEEEEEEEec----cceeeecCCcEEEcCCCcE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P------PIGISMYLSVVE----PITQIIGGPDMYINKGSTM 95 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~------~~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~ 95 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. + .....+.|.|.. +|.+...+. ..+.+|+.+
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v 144 (475)
T 1iga_A 66 RGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL-CSTQPDGNV 144 (475)
T ss_pred CCceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc-cccCCCCeE
Confidence 4688765443345678999999999999999999886 3 123345677753 333332222 223689999
Q ss_pred EEEEEeecCCCCC-C-eeEEEECCEE
Q psy1826 96 NLTCVIKHSPEPP-P-AIYWLHNTEV 119 (169)
Q Consensus 96 ~l~C~~~~~p~p~-~-~i~W~~~~~~ 119 (169)
.|.|.+.+.+ |. | .+.|++++..
T Consensus 145 ~L~C~~~g~~-P~~p~~v~W~~~~~~ 169 (475)
T 1iga_A 145 VIACLVQGFF-PQEPLSVTWSESGQG 169 (475)
T ss_pred EEEEEEeeec-CCCceEEEEcCCCcc
Confidence 9999999863 44 4 9999998753
No 201
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.27 E-value=2.3e-12 Score=91.69 Aligned_cols=84 Identities=19% Similarity=0.248 Sum_probs=48.5
Q ss_pred CeEEEEEcCCCCCCCeEEEEEEEcC-C-CceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCC-CeeE
Q psy1826 39 EDWTLQIKYPQKRDSGIYECQVSTT-P-PIGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPP-PAIY 112 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G~Y~C~~~~~-~-~~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~-~~i~ 112 (169)
+.+.|.|.+++.+|+|.|.|.+.+. + .......|.|.. +|.+...++...+.+|+.+.|.|.+.+.+ |+ +.++
T Consensus 91 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~-p~~~~v~ 169 (233)
T 3bqu_C 91 TDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFY-PKDINVK 169 (233)
T ss_dssp EEEEEC-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEB-SSCEEEE
T ss_pred CEEEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEcccc-CCceEEE
Confidence 3447999999999999999999876 2 222233455543 44444434333344799999999999864 44 3899
Q ss_pred EEECCEEeecc
Q psy1826 113 WLHNTEVSQLN 123 (169)
Q Consensus 113 W~~~~~~~~~~ 123 (169)
|+++|.++..+
T Consensus 170 W~k~g~~~~~~ 180 (233)
T 3bqu_C 170 WKIDGSERQNG 180 (233)
T ss_dssp EEEC-----CC
T ss_pred EEECCeeCCCC
Confidence 99999887644
No 202
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.26 E-value=3.8e-11 Score=83.98 Aligned_cols=83 Identities=22% Similarity=0.307 Sum_probs=58.3
Q ss_pred CeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 39 EDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
++++|.|.+++.+|+|.|.|.+.+. +. ......+.+..+|.....+.......+..+.+.|.+.+. .|++.+.|.++
T Consensus 81 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~-~P~~~~~w~~~ 159 (225)
T 4fmk_A 81 RDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGG-RPPARITWISS 159 (225)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEE-BSCCEEEEECS
T ss_pred CcEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCC-CCCCEEEEEEC
Confidence 3457999999999999999999886 32 223344555555555544455556677778888877665 36789999988
Q ss_pred CEEeec
Q psy1826 117 TEVSQL 122 (169)
Q Consensus 117 ~~~~~~ 122 (169)
+..+..
T Consensus 160 ~~~~~~ 165 (225)
T 4fmk_A 160 LGGEAK 165 (225)
T ss_dssp SCCEEE
T ss_pred CccccC
Confidence 765443
No 203
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.25 E-value=2.2e-12 Score=96.24 Aligned_cols=104 Identities=22% Similarity=0.367 Sum_probs=32.2
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEecc------
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEP------ 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~------ 77 (169)
..|.|+|++. .+.. ..|+.. ... .|.|.+++.+|+|.|.|.+.+.+.....+.|.|...
T Consensus 39 ~~v~W~k~g~-~~~~--------~~~~~~--~~~----~L~i~~v~~~D~G~Y~C~a~n~~~~~~~~~l~V~~~~~~~~~ 103 (334)
T 1ry7_B 39 GPTVWVKDGT-GLVP--------SERVLV--GPQ----RLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDD 103 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceEEEECCe-eCCC--------cccEEe--ccc----eEEEeecccccCEEEEEEEEeCCeEEEEEEEEEeccCccccc
Confidence 3689999864 2211 134432 223 899999999999999999988633334455555432
Q ss_pred ----------------ceeeec----CCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 78 ----------------ITQIIG----GPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 78 ----------------p~~~~~----~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
|.+... .....+.+|+.+.|.|.+.+. |.+.+.|++++..+....
T Consensus 104 ~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~--p~~~v~W~~~~~~~~~~~ 168 (334)
T 1ry7_B 104 EDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGN--PTPSISWLKNGREFRGEH 168 (334)
T ss_dssp ---------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCS--SCCEEECCBTTBCCCTTS
T ss_pred cccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCC--CCCeEEEEECCEECcccc
Confidence 222211 123678899999999999886 456999999998876543
No 204
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.25 E-value=3.7e-11 Score=84.36 Aligned_cols=76 Identities=22% Similarity=0.357 Sum_probs=49.3
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEe---------------------------c---cceeeecCCcEEEcC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVV---------------------------E---PITQIIGGPDMYINK 91 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~---------------------------~---~p~~~~~~~~~~v~~ 91 (169)
.|.|.+++.+|+|.|.|.+.+.... .+.|.+. . .+..+...+.....+
T Consensus 50 ~L~i~~v~~~DsG~Y~C~~~~~~s~--~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~ 127 (204)
T 1sy6_A 50 KWNLGSNAKDPRGMYQCKGSQNKSK--PLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSIS 127 (204)
T ss_dssp CEEEEEGGGCCEEEEEEESSSSCCC--CEEEEEEC------------------------------------CCCCEEEEE
T ss_pred eEEeCCCCcCCCEEEEEEecCCCCe--eEEEEEEEeccccccccccccccccccccccccccccccccceecCCceeeec
Confidence 7999999999999999996543222 2333333 0 011122222222238
Q ss_pred CCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 92 GSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 92 g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
|+.+.|.|. +. |.|.+.|++++.++...
T Consensus 128 G~~v~L~C~--g~--p~p~i~W~k~~~~l~~~ 155 (204)
T 1sy6_A 128 GTTVILTCP--QY--PGSEILWQHNDKNIGGD 155 (204)
T ss_dssp TTEEEEECS--CC--CSSCEEEEETTEEESCC
T ss_pred CCcEEEEcC--CC--CCCceEEEECCEECCCc
Confidence 999999998 64 45689999999988654
No 205
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.25 E-value=6.2e-11 Score=92.05 Aligned_cols=77 Identities=14% Similarity=0.279 Sum_probs=52.9
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEE
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEV 119 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~ 119 (169)
..|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|.+....+ ..+..|..+.|.|.+.|. |.|.|+|++++.+
T Consensus 103 ~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p-~~~~~~~~~~L~C~a~G~--P~P~i~W~k~~~~ 179 (423)
T 3qs7_E 103 VSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRP-YFRKMENQDALVCISESV--PEPIVEWVLCDSQ 179 (423)
T ss_dssp EEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEE-EEEECSSSSCEEEEEEES--SCCEEEEEEC---
T ss_pred EEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccccCC-cEeccCCceEEEEEEeee--cCCeEEEEECCCC
Confidence 37999999999999999999998 6666667777776654322222 234567888999999996 4679999998875
Q ss_pred e
Q psy1826 120 S 120 (169)
Q Consensus 120 ~ 120 (169)
+
T Consensus 180 ~ 180 (423)
T 3qs7_E 180 G 180 (423)
T ss_dssp -
T ss_pred C
Confidence 4
No 206
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.23 E-value=1.4e-11 Score=93.54 Aligned_cols=81 Identities=14% Similarity=0.196 Sum_probs=64.4
Q ss_pred EEEEcCCCCCC------CeEEEEEEEcC-CC-ceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCC-CCCeeE
Q psy1826 42 TLQIKYPQKRD------SGIYECQVSTT-PP-IGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPE-PPPAIY 112 (169)
Q Consensus 42 ~L~I~~v~~~D------~G~Y~C~~~~~-~~-~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~-p~~~i~ 112 (169)
.|.|.+++.+| +|.|.|.+.|. +. .+..+.+.+..+|.+...+....+.+|+.+.|.|.+.+.+. |.+.+.
T Consensus 60 ~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~ 139 (388)
T 2v5m_A 60 KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVS 139 (388)
T ss_dssp EEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEE
T ss_pred eEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEE
Confidence 89999999987 99999999987 32 23456777777776666666788999999999999988642 347999
Q ss_pred EEECCEEeec
Q psy1826 113 WLHNTEVSQL 122 (169)
Q Consensus 113 W~~~~~~~~~ 122 (169)
|++++..+..
T Consensus 140 W~~~~~~~~~ 149 (388)
T 2v5m_A 140 WHTDEEENYF 149 (388)
T ss_dssp EEETTCCEEC
T ss_pred EEeCCCcccc
Confidence 9999876644
No 207
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.23 E-value=8.4e-11 Score=84.51 Aligned_cols=78 Identities=15% Similarity=0.234 Sum_probs=60.5
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
.|.|.+++.+|+|.|.|.+.+. ..+..+.+.|..++.. ..+....+.+|+.+.|.|.+... .|.+.+.|++++..+.
T Consensus 49 ~l~i~~~~~~d~G~Y~C~~~~~-~~s~~~~l~v~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~-~p~~~v~W~~~g~~~~ 125 (262)
T 3rjd_A 49 SYRITSASVNDSGEYRCQRGLS-GRSDPIQLEIHRGWLL-LQVSSRVFTEGEPLALRCHAWKD-KLVYNVLYYRNGKAFK 125 (262)
T ss_dssp EEEESSCCGGGCEEEEEEESSS-CCCCCEEEEEECSSEE-EEESCSEEETTSCEEEEEEEGGG-CCCEEEEEEETTEEEE
T ss_pred eEEEecCCcccCeEEEEEEecC-CccccEEEEEeccceE-ecCCCeEEecCCeEEEEEEccCC-CCCceEEEEECCcccc
Confidence 8999999999999999999875 2233556777766543 34455678899999999999443 3667999999998875
Q ss_pred c
Q psy1826 122 L 122 (169)
Q Consensus 122 ~ 122 (169)
.
T Consensus 126 ~ 126 (262)
T 3rjd_A 126 F 126 (262)
T ss_dssp E
T ss_pred c
Confidence 4
No 208
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.23 E-value=6.8e-11 Score=87.79 Aligned_cols=111 Identities=12% Similarity=0.134 Sum_probs=69.7
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC------CCceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT------PPIGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIY 112 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~------~~~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~ 112 (169)
.|.|.+++.+|+|.|.|.+.+. ...+..+.|.|.. +|.+...+.. .+.+|+.+.|.|.+.+ +++.+.
T Consensus 75 ~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~---~~~~~~ 150 (316)
T 3vh8_G 75 SFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGP-LVKSGERVILQCWSDI---MFEHFF 150 (316)
T ss_dssp CEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCS-EEETTCCEEEEEEESS---CCSEEE
T ss_pred EEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCC-ccCCCCeEEEEEcCCC---CCcEEE
Confidence 7999999999999999999753 2234456666653 2333333333 4889999999999854 456999
Q ss_pred EEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEeee
Q psy1826 113 WLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAGT 162 (169)
Q Consensus 113 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
|++++..+.................+. +.....+|.+.|.+...
T Consensus 151 w~k~g~~~~~~~~~~~~~~~~~~~~L~------i~~v~~~D~G~Y~C~a~ 194 (316)
T 3vh8_G 151 LHKEGISKDPSRLVGQIHDGVSKANFS------IGPMMLALAGTYRCYGS 194 (316)
T ss_dssp EEETTCCSCCEEEECEEETTEEEEEEE------ECSCCGGGCEEEEEEEE
T ss_pred EEECCCccccceeeeeecCCCceEEEE------ECCCChhhCceEEEEEe
Confidence 999987764322111111111111122 33456677777777654
No 209
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.23 E-value=4.1e-12 Score=98.44 Aligned_cols=93 Identities=18% Similarity=0.309 Sum_probs=64.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec----cceeeecCCcEEEcCCCcEEEEEEe
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE----PITQIIGGPDMYINKGSTMNLTCVI 101 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~----~p~~~~~~~~~~v~~g~~~~l~C~~ 101 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+. ......+.|.|.. +|.+...++...+.+|+.+.|.|.+
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~ 143 (434)
T 1igy_B 64 KDKATLTRDRSSNTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 143 (434)
T ss_dssp TTTEECCBCGGGCBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEE
Confidence 4677744321123458999999999999999999885 3344455777753 3443333333345789999999999
Q ss_pred ecCCCCCC-eeEEEECCEEe
Q psy1826 102 KHSPEPPP-AIYWLHNTEVS 120 (169)
Q Consensus 102 ~~~p~p~~-~i~W~~~~~~~ 120 (169)
.+.+ |.| .+.|++++..+
T Consensus 144 ~g~~-P~p~~v~W~k~~~~~ 162 (434)
T 1igy_B 144 KGYF-PEPVTVTWNSGSLSS 162 (434)
T ss_dssp EEEB-SSCCEEEETTTTBCS
T ss_pred eeec-CCCeEEEEeeCCcCC
Confidence 9862 444 99999988753
No 210
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.23 E-value=1.3e-10 Score=91.00 Aligned_cols=82 Identities=12% Similarity=0.130 Sum_probs=60.6
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEE---EeccceeeecCC-cEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLS---VVEPITQIIGGP-DMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~---v~~~p~~~~~~~-~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.|.|.+++.+|+|.|.|.+.|. +.......+. +..+|.+...++ ...+.+|+.+.|.|.+.+.+.|.+.++|+++
T Consensus 310 ~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~ 389 (475)
T 1iga_A 310 VLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQG 389 (475)
T ss_pred EEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEEC
Confidence 7999999999999999999997 4433333442 245565544433 2346789999999999996434569999999
Q ss_pred CEEeecc
Q psy1826 117 TEVSQLN 123 (169)
Q Consensus 117 ~~~~~~~ 123 (169)
|.++..+
T Consensus 390 g~~l~~~ 396 (475)
T 1iga_A 390 SQELPRE 396 (475)
T ss_pred CEECCCC
Confidence 9988654
No 211
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.22 E-value=5.9e-11 Score=86.62 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=61.3
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccce-eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE-CCE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPIT-QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH-NTE 118 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~-~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~-~~~ 118 (169)
.|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|. +...+....+.+|+.+.|.|.+.+.| +++.+.|++ ++.
T Consensus 52 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~-~~~~v~W~~~~~~ 130 (289)
T 3ejj_X 52 TLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPA-LKDSVSLMREGGR 130 (289)
T ss_dssp EEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGG-GGGSEEEEEGGGE
T ss_pred EEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCC-cceEEEEEecCCe
Confidence 8999999999999999999887 6667778888887665 34556678899999999999999853 333499986 666
Q ss_pred Eeec
Q psy1826 119 VSQL 122 (169)
Q Consensus 119 ~~~~ 122 (169)
.+..
T Consensus 131 ~~~~ 134 (289)
T 3ejj_X 131 QVLR 134 (289)
T ss_dssp ECCT
T ss_pred ecCC
Confidence 6643
No 212
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.22 E-value=9.3e-12 Score=92.15 Aligned_cols=108 Identities=18% Similarity=0.276 Sum_probs=72.9
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec-cceee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE-PITQI 81 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~-~p~~~ 81 (169)
..|.|+|++...... .....|+.. . .+ .|.|.+++.+|+|.|.|.+.+. +.....+.+.+.. +|.+.
T Consensus 36 ~~v~W~k~~~~~~~~-----~~~~~~~~~-~-~~----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~ 104 (315)
T 1itb_B 36 GTITWYKDDSKTPVS-----TEQASRIHQ-H-KE----KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLC 104 (315)
T ss_dssp SCCCEECTTSCSCSC-----CCTTSSSEE-C-SS----BEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEECCCTTSS
T ss_pred ceEEEEeCCCcCccc-----cccCCcEec-c-CC----eEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeCCCCCcc
Confidence 478999987421111 112345552 2 33 7999999999999999999987 5555555555433 33322
Q ss_pred ecC---CcEEEcCCCcEEEEEEe------ecCCCCCCeeEEEECCEEeeccc
Q psy1826 82 IGG---PDMYINKGSTMNLTCVI------KHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 82 ~~~---~~~~v~~g~~~~l~C~~------~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
..+ ....+.+|+.+.|.|.+ .+. |.|.+.|++++.++..+.
T Consensus 105 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~--p~~~i~W~k~~~~l~~~~ 154 (315)
T 1itb_B 105 YNAQAIFKQKLPVAGDGGLVCPYMEFFKNENN--ELPKLQWYKDCKPLLLDN 154 (315)
T ss_dssp SCGGGEEEEEEETTSCEEEECSSCTTTCTTTT--CCCCCEEEETTEECCCCS
T ss_pred cccccccceEEecCCCeEEEEecccccccCCC--CCCEEEEEECCEECCCcc
Confidence 221 13568899999999998 564 567999999999986543
No 213
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.20 E-value=1.2e-09 Score=76.68 Aligned_cols=114 Identities=20% Similarity=0.255 Sum_probs=69.6
Q ss_pred EEEEEEcCce---eEEEEcceeecCCCCeEEEec-CCCCeEEEEEcCCCCCCCeEEEEEEEcCC----------C--ceE
Q psy1826 5 QISWVRHRDI---HLLTVSGYTYTSDQRFSCIHK-PQNEDWTLQIKYPQKRDSGIYECQVSTTP----------P--IGI 68 (169)
Q Consensus 5 ~V~W~k~~~~---~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~----------~--~~~ 68 (169)
.|.|+|+... ..+-..........|+.+... ...+.+.|.|.+++.+|+|.|.|.+.+.. . ...
T Consensus 31 ~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~ 110 (207)
T 1ypz_E 31 SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWHISEGYELGTDKLVFGQ 110 (207)
T ss_dssp EEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECBCCCTTCCCCCCCCEECC
T ss_pred EEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecCCcccccccccceeeecC
Confidence 6999996521 111111111123478886554 23467799999999999999999998752 0 123
Q ss_pred EEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 69 SMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 69 ~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
.+.|.|...+. ...++.+.+..+ .+.|.|.+.+.+.+++.+.|+++ .++.
T Consensus 111 ~t~L~V~~~~~-~~~~P~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~ 160 (207)
T 1ypz_E 111 GTQVTVEPKSQ-PPAKPSVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKIV 160 (207)
T ss_dssp CEEEEEECCCC-CCCCCEEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEEE
T ss_pred ccEEEEccCCC-CCCCCeEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-Cccc
Confidence 45777764321 112233333332 36999999986322479999999 6654
No 214
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.20 E-value=1.3e-10 Score=86.27 Aligned_cols=77 Identities=16% Similarity=0.181 Sum_probs=57.2
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CC-----ceEEEEEEEec---cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PP-----IGISMYLSVVE---PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIY 112 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~-----~~~~~~l~v~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~ 112 (169)
.|.|.+++.+|+|.|.|.+.|. +. .+....|.|.. +|.+... +...+.+|+.+.|.|.+.. |.+.+.
T Consensus 175 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~-~~~~v~~G~~v~L~C~~~~---~~~~~~ 250 (316)
T 3vh8_G 175 NFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQ-PGPKVQAGESVTLSCSSRS---SYDMYH 250 (316)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEE-SCSCCCTTSCCEEEEEESS---CCSEEE
T ss_pred EEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeC-CCCeecCCCcEEEEEECCC---CCcEEE
Confidence 7999999999999999999987 42 14445666653 3333333 3336789999999999864 457999
Q ss_pred EEECCEEeec
Q psy1826 113 WLHNTEVSQL 122 (169)
Q Consensus 113 W~~~~~~~~~ 122 (169)
|+++|..+..
T Consensus 251 W~k~g~~~~~ 260 (316)
T 3vh8_G 251 LSREGGAHER 260 (316)
T ss_dssp EEETTSSCCE
T ss_pred EEECCCcCCC
Confidence 9999876653
No 215
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.20 E-value=7.4e-10 Score=85.85 Aligned_cols=80 Identities=9% Similarity=0.117 Sum_probs=56.6
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CCce--------EEEEEEEeccceeeecCC---cEEEcCCCcEEEEEEeecC-CCC
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PPIG--------ISMYLSVVEPITQIIGGP---DMYINKGSTMNLTCVIKHS-PEP 107 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~~~--------~~~~l~v~~~p~~~~~~~---~~~v~~g~~~~l~C~~~~~-p~p 107 (169)
..|.|.++..+|+|.|.|.+.|. +... ....+.|...|. ..+. ...+.+|+.+.|.|.+.+. |.+
T Consensus 142 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~--~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~ 219 (450)
T 1z7z_I 142 VTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA--TPPQLVSPRVLEVDTQGTVVCSLDGLFPVS 219 (450)
T ss_dssp EEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCS--SCCEEECCSEEETTSEEEEEEEEESCTTGG
T ss_pred eEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCC--CCCEecCceeEEeCCcEEEEEEeeCCCCCC
Confidence 38999999999999999999986 3211 122333332211 0111 1578899999999999997 433
Q ss_pred CCeeEEEECCEEeec
Q psy1826 108 PPAIYWLHNTEVSQL 122 (169)
Q Consensus 108 ~~~i~W~~~~~~~~~ 122 (169)
.+.+.|++++..+..
T Consensus 220 ~~~~~W~~~~~~~~~ 234 (450)
T 1z7z_I 220 EAQVHLALGDQRLNP 234 (450)
T ss_dssp GCEEEEEETTEECCC
T ss_pred ceEEEEeCCCEeCCc
Confidence 689999999988765
No 216
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.20 E-value=9.9e-11 Score=92.58 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=72.6
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCe-EEEEEEEcC-CC-ceEEEEEEEe----c
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSG-IYECQVSTT-PP-IGISMYLSVV----E 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C~~~~~-~~-~~~~~~l~v~----~ 76 (169)
..|.|+|.++..+. .+.|+. ....+ .|.|.+++.+|+| .|.|.+.+. +. .+..+.|.|. .
T Consensus 144 ~~v~W~~~~g~~l~--------~~~~~~-~~~~~----~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~ 210 (524)
T 2ec8_A 144 TNYSLKGCQGKPLP--------KDLRFI-PDPKA----GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKA 210 (524)
T ss_dssp SCEEEECSSSCCCC--------SSCEEE-EETTT----EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCS
T ss_pred ceEEEEccCCcCcC--------CCCcee-ECCCc----cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCC
Confidence 57899884322221 223444 33344 8999999999999 999999887 33 2346677775 5
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCe-eEEEECCEEe
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPA-IYWLHNTEVS 120 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~-i~W~~~~~~~ 120 (169)
+|.+...+....+.+|+.+.|.|.+.+.| .|. +.|++++..+
T Consensus 211 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p--~p~~i~W~~~~~~~ 253 (524)
T 2ec8_A 211 VPVVSVSKASYLLREGEEFTVTCTIKDVS--SSVYSTWKRENSQT 253 (524)
T ss_dssp CCEEECSCSEEEEETTSCEEEEEEEEESS--TTCEEEEEETTCSC
T ss_pred CCcEEecCCcceEEcCCcEEEEEEEecCC--CcEEEEEEeCCCCC
Confidence 66766667777899999999999999864 445 9999998873
No 217
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.19 E-value=2.1e-10 Score=87.99 Aligned_cols=78 Identities=17% Similarity=0.246 Sum_probs=59.9
Q ss_pred CeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEE-EcCCC-cEEEEEEeecCCCCC--CeeEE
Q psy1826 39 EDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMY-INKGS-TMNLTCVIKHSPEPP--PAIYW 113 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~-v~~g~-~~~l~C~~~~~p~p~--~~i~W 113 (169)
++..|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.+...+.... +..|+ .+.|.|.+.+.. |. +.++|
T Consensus 252 g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~Gfy-P~~~~~VtW 330 (401)
T 3f8u_B 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFY-PSGGLEVEW 330 (401)
T ss_dssp EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEB-SSTTCEEEE
T ss_pred CcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCc-CCCCcEEEE
Confidence 4568999999999999999999886 4455567888888887655444333 45676 799999999973 44 79999
Q ss_pred E-ECC
Q psy1826 114 L-HNT 117 (169)
Q Consensus 114 ~-~~~ 117 (169)
. +++
T Consensus 331 ~~rdg 335 (401)
T 3f8u_B 331 ELRGG 335 (401)
T ss_dssp EEESS
T ss_pred EecCC
Confidence 5 765
No 218
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.19 E-value=1.4e-11 Score=91.85 Aligned_cols=80 Identities=23% Similarity=0.317 Sum_probs=62.4
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc----ceeee-cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP----ITQII-GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~----p~~~~-~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.|.|.+++.+|+|.|.|.+.|. +.....+.|.|... |.+.. .+....+.+|+.+.|.|.+.+. |.|.+.|++
T Consensus 181 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~--p~p~v~W~~ 258 (334)
T 1ry7_B 181 SLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSD--AQPHIQWLK 258 (334)
T ss_dssp EEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCS--SCEEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecC--CCCeEEEEE
Confidence 8999999999999999999997 55666677777652 22222 2356788999999999999986 456999999
Q ss_pred ----CCEEeecc
Q psy1826 116 ----NTEVSQLN 123 (169)
Q Consensus 116 ----~~~~~~~~ 123 (169)
+|..+..+
T Consensus 259 ~~~~~g~~~~~~ 270 (334)
T 1ry7_B 259 HVEVNGSKVGPD 270 (334)
T ss_dssp CCCGGGCSBCTT
T ss_pred CCcCCCccccCC
Confidence 66666543
No 219
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.18 E-value=3.7e-10 Score=86.19 Aligned_cols=103 Identities=21% Similarity=0.272 Sum_probs=65.9
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceE---EEEEEEe----
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGI---SMYLSVV---- 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~---~~~l~v~---- 75 (169)
..+.|++++.. .. .+.|.......+ .|.|.+++.+|+|.|.|.+.|. +.... ...+.+.
T Consensus 133 ~~~~W~~~~~~-~~--------~~~~~~~~~~~~----~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~ 199 (384)
T 3kld_A 133 LSYAWIFNEYP-SY--------QDNRRFVSQETG----NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGV 199 (384)
T ss_dssp EEEEEEETTEE-CC--------CSSSEEECTTTC----CEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEE
T ss_pred eEEEEEECCCC-CE--------eeccEEEEcCCC----cEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCc
Confidence 46889987631 11 112322223334 7999999999999999999987 32211 1122221
Q ss_pred ---ccceee-ecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC-CEEee
Q psy1826 76 ---EPITQI-IGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN-TEVSQ 121 (169)
Q Consensus 76 ---~~p~~~-~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~-~~~~~ 121 (169)
.+|.+. ..+....+.+|+.+.|.|.+.|. |.|.+.|+++ +.++.
T Consensus 200 ~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~--P~p~i~W~k~~~~~~~ 248 (384)
T 3kld_A 200 MGEYEPKIEVQFPETVPAEKGTTVKLECFALGN--PVPTILWRRADGKPIA 248 (384)
T ss_dssp CCCEEEEEEEECCSEEEEETTSCEEEEEEEEEE--SCCEEEEEETTCCCCC
T ss_pred ccccCCceeecCCCceEecCCCcEEEEEEEeec--CCCcEEEEeCCCcccc
Confidence 123322 33456778999999999999996 4569999984 54443
No 220
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.18 E-value=2.6e-10 Score=86.19 Aligned_cols=92 Identities=11% Similarity=0.043 Sum_probs=65.8
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC---CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT---PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~---~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
...|.|.++..+|+|.|.|.+.|. +.....+.|.|... .|+.+.|.|.+.+.|.|...+.|+++
T Consensus 254 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v-------------~g~~~~l~C~~~g~p~p~~~i~W~~~ 320 (363)
T 1wio_A 254 PLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA-------------TQLQKNLTCEVWGPTSPKLMLSLKLE 320 (363)
T ss_dssp SCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE-------------CCCSSSEEEEEESSCCTTCCEEEECS
T ss_pred ceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe-------------cCCCeeEEEEEccccCCCccEEEEeC
Confidence 348999999999999999999987 44455556655511 28889999999997544334999999
Q ss_pred CEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEeee
Q psy1826 117 TEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAGT 162 (169)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
+.++..+.. + .+.....+|.+.|.+...
T Consensus 321 ~~~~~~~~~------------l------~i~~v~~~d~G~Y~C~a~ 348 (363)
T 1wio_A 321 NKEAKVSKR------------E------KAVWVLNPEAGMWQCLLS 348 (363)
T ss_dssp SSSCSEEES------------S------SEEEESSCCSEEEEEEEC
T ss_pred CCceeeeee------------e------eeeeeccccceeEEEEEe
Confidence 976653211 1 135666777888877655
No 221
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.17 E-value=3.9e-11 Score=88.58 Aligned_cols=79 Identities=16% Similarity=0.207 Sum_probs=60.4
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CC--ceEEEEEEEeccceeeecC-CcEEEcCCCcEEEEEEeecCCCCCC-eeEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PP--IGISMYLSVVEPITQIIGG-PDMYINKGSTMNLTCVIKHSPEPPP-AIYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~--~~~~~~l~v~~~p~~~~~~-~~~~v~~g~~~~l~C~~~~~p~p~~-~i~W~~~ 116 (169)
.|.|.++..+|.|.|.|.+.|. +. ....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.| +| .+.|+++
T Consensus 173 ~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P--~p~~v~W~k~ 250 (308)
T 4fom_A 173 QYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANP--PPFKSVWSRL 250 (308)
T ss_dssp EEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEES--CEEEEECCBS
T ss_pred cceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCC--CCcEEEEEEC
Confidence 6899999999999999999987 43 3344556666677655443 456678899999999999974 45 6999998
Q ss_pred CEEeec
Q psy1826 117 TEVSQL 122 (169)
Q Consensus 117 ~~~~~~ 122 (169)
+..+..
T Consensus 251 ~~~~~~ 256 (308)
T 4fom_A 251 DGQWPD 256 (308)
T ss_dssp SSCCCS
T ss_pred CeECCC
Confidence 876643
No 222
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.17 E-value=5.4e-11 Score=89.99 Aligned_cols=78 Identities=15% Similarity=0.320 Sum_probs=58.7
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCC---CCCCeeEEEECC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSP---EPPPAIYWLHNT 117 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p---~p~~~i~W~~~~ 117 (169)
.|.|.+++.+|+|.|.|.+.+. ......+.+.|..+|.. +....+.+|+.+.|.|.+.+.+ .|.|.+.|+++|
T Consensus 143 ~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~---~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g 219 (363)
T 1wio_A 143 TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA---SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAER 219 (363)
T ss_dssp EEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCS---EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESS
T ss_pred EEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCC---CCceEEecCCEEEEEEEEecccccCCCceeEEEecCC
Confidence 8999999999999999999886 33334445556544432 1456788999999999887732 246799999999
Q ss_pred EEeec
Q psy1826 118 EVSQL 122 (169)
Q Consensus 118 ~~~~~ 122 (169)
.++..
T Consensus 220 ~~~~~ 224 (363)
T 1wio_A 220 ASSSK 224 (363)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 87654
No 223
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.15 E-value=6.3e-10 Score=84.56 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=71.0
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCe---EEEEEEEcC-CCceEEEEEEEe---c
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSG---IYECQVSTT-PPIGISMYLSVV---E 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G---~Y~C~~~~~-~~~~~~~~l~v~---~ 76 (169)
..|.|+|++....... .....+.|+. ...++ .|.|.+++.+|+| .|.|.+.+. +........... .
T Consensus 131 ~~v~W~~~~~~~~~~~--~~~~~~~~~~-~~~~~----~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~ 203 (395)
T 1bih_A 131 PLITWKKRLSGADPNA--DVTDFDRRIT-AGPDG----NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVT 203 (395)
T ss_dssp CEEEEEEEETTSCGGG--CCCCCCTTEE-ECTTS----CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCB
T ss_pred CeEEEEecCCCcCccc--ccccccccEE-EcCCC----cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccc
Confidence 4789998751111000 0001134555 33444 7999999999999 999999997 443332222111 1
Q ss_pred ----------cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 77 ----------PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 77 ----------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+|.+ .+....+.+|+.+.|.|.+.+.| .|.+.|++++.++....
T Consensus 204 ~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p--~~~i~W~~~g~~~~~~~ 257 (395)
T 1bih_A 204 KDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNP--MGYPNYFKNGKDVNGNP 257 (395)
T ss_dssp CCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEECSS--CCCCEEEETTEECCCCT
T ss_pred cccccccCCcCcee--cCCceEEECCCcEEEEEEeccCC--CCeEEEEECCEEcCCCC
Confidence 1221 24567889999999999999864 56899999999886543
No 224
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.14 E-value=2.2e-11 Score=85.97 Aligned_cols=82 Identities=12% Similarity=0.130 Sum_probs=57.6
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEE---EeccceeeecC-CcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLS---VVEPITQIIGG-PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~---v~~~p~~~~~~-~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.|.|.+++.+|+|.|.|.+.+. ........+. +..+|.+...+ ....+.+|+.+.|.|.+.|.+.+++.++|++|
T Consensus 67 ~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~ 146 (214)
T 1ow0_A 67 VLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQG 146 (214)
T ss_dssp ECTTTHHHHHHTCEEEEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEET
T ss_pred EEEEeHHHcCCCCeEEEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEEC
Confidence 7889999999999999999987 3222222332 23455543333 23345678899999999996323469999999
Q ss_pred CEEeecc
Q psy1826 117 TEVSQLN 123 (169)
Q Consensus 117 ~~~~~~~ 123 (169)
|.++..+
T Consensus 147 g~~l~~~ 153 (214)
T 1ow0_A 147 SQELPRE 153 (214)
T ss_dssp TEECCGG
T ss_pred CEECCCC
Confidence 9987654
No 225
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.14 E-value=9.4e-11 Score=90.99 Aligned_cols=79 Identities=18% Similarity=0.288 Sum_probs=54.4
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEE----EEeccceeeecCC-cEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYL----SVVEPITQIIGGP-DMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l----~v~~~p~~~~~~~-~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.|.|.+++.+|+|.|.|.+.|. +.......+ .+..+|.+...+. ...+..| .+.|.|.+.|.+.++..++|++
T Consensus 306 ~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k 384 (444)
T 1igt_B 306 ALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTN 384 (444)
T ss_dssp EEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEE
Confidence 7999999999999999999997 444222233 2334565443333 2223344 5999999999532333999999
Q ss_pred CCEEee
Q psy1826 116 NTEVSQ 121 (169)
Q Consensus 116 ~~~~~~ 121 (169)
+|.++.
T Consensus 385 ~g~~l~ 390 (444)
T 1igt_B 385 NGKTEL 390 (444)
T ss_dssp TTEECS
T ss_pred CCEEcc
Confidence 999874
No 226
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.12 E-value=2.8e-09 Score=84.57 Aligned_cols=91 Identities=16% Similarity=0.254 Sum_probs=61.0
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--------------CceEEEEEEEec----cceeeecCC-cE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--------------PIGISMYLSVVE----PITQIIGGP-DM 87 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--------------~~~~~~~l~v~~----~p~~~~~~~-~~ 87 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .....+.|.|.. +|.+....+ ..
T Consensus 66 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~ 145 (512)
T 1zvo_C 66 RGRVTISVDTSRNQFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCR 145 (512)
T ss_pred CCceEEEecCCCCEEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcc
Confidence 46888655433457899999999999999999998752 122345677763 333321111 11
Q ss_pred -EEcCCCcEEEEEEeecCCCCC-CeeEEEECCEE
Q psy1826 88 -YINKGSTMNLTCVIKHSPEPP-PAIYWLHNTEV 119 (169)
Q Consensus 88 -~v~~g~~~~l~C~~~~~p~p~-~~i~W~~~~~~ 119 (169)
.+ .++.+.|.|.+.+.. |. +.++|++++..
T Consensus 146 ~~~-~~~~v~L~C~~~g~~-P~p~~v~W~~~~~~ 177 (512)
T 1zvo_C 146 HPK-DNSPVVLACLITGYH-PTSVTVTWYMGTQS 177 (512)
T ss_pred ccc-CCCeEEEEEEEEeee-cCceEEEEEcCccc
Confidence 22 468999999999872 44 49999986543
No 227
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.12 E-value=1e-09 Score=83.14 Aligned_cols=106 Identities=20% Similarity=0.272 Sum_probs=70.1
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceE-----EEEEEEec
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGI-----SMYLSVVE 76 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~-----~~~l~v~~ 76 (169)
...|.|+|++..... ..+.|.......+ .|.|.+++.+|+|.|.|.+.+. +.... .+.+.+..
T Consensus 131 ~~~i~W~~~~~~~~~-------~~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~ 199 (382)
T 1cs6_A 131 ALSYRWLLNEFPNFI-------PADGRRFVSQTTG----NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAA 199 (382)
T ss_dssp CCEEEEEESSTTCBC-------CCCSSEEECTTTC----CEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred CcEEEEEECCCcccc-------ccCceEEEecCce----EEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccch
Confidence 357899998642111 1223443223334 7999999999999999999886 32221 23444331
Q ss_pred ------cceeeec-CCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 77 ------PITQIIG-GPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 77 ------~p~~~~~-~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
+|.+... +....+.+|+.+.|.|.+.+. |.|.+.|++++..+.
T Consensus 200 ~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~--p~~~i~W~~~~~~~~ 249 (382)
T 1cs6_A 200 EDARQYAPSIKAKFPADTYALTGQMVTLECFAFGN--PVPQIKWRKLDGSQT 249 (382)
T ss_dssp CCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEE--SCCEEEEEECCSCCS
T ss_pred hhcccCCCceeccCCCceEEeCCCeEEEEEEEccC--CCCEEEEEECCcccc
Confidence 3443333 446788999999999999996 456999999876543
No 228
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.10 E-value=2.5e-10 Score=83.33 Aligned_cols=92 Identities=17% Similarity=0.272 Sum_probs=58.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc-------CC-------------------CceEEEEEEEe----c
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST-------TP-------------------PIGISMYLSVV----E 76 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~-------~~-------------------~~~~~~~l~v~----~ 76 (169)
..|+.+......+.++|.|.+++.+|+|.|.|.+.+ .+ .......|.|. .
T Consensus 88 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~ 167 (267)
T 3u1s_H 88 QGRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTK 167 (267)
T ss_dssp TTTEEEEECGGGCCEEEEECSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCB
T ss_pred CCcEEEEEcCCCCEEEEEECCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCC
Confidence 478886554444677899999999999999999862 01 01112355554 2
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
+|.+....+...+.+|+.+.|.|.+.+...+++.+.| ++..+
T Consensus 168 ~P~v~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~ 209 (267)
T 3u1s_H 168 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGAL 209 (267)
T ss_dssp CCEEEEECCCGGGEETTEEEEEEEEEEEBSSCCEEEE--GGGTB
T ss_pred CCEEEEecCCcccCCCCcEEEEEEEeEEECCCeEEEE--CCccc
Confidence 3333322222223478999999999985323578999 55443
No 229
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.10 E-value=4e-09 Score=83.67 Aligned_cols=110 Identities=12% Similarity=0.118 Sum_probs=67.8
Q ss_pred CcEEEEEEcCceeEE-EEc--ceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCc-eEEEEEEE---
Q psy1826 3 LAQISWVRHRDIHLL-TVS--GYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPI-GISMYLSV--- 74 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~-~~~--~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~-~~~~~l~v--- 74 (169)
.+.|.|+|++.. .. ... ......+.+|... ..|.|..+...|.|.|.|.+.|. ... ...+....
T Consensus 328 ~~~i~W~k~g~~-~~~~~~~~~~~~~~~gt~~~~-------s~L~i~~~~~~d~g~y~C~a~n~~~~~~~~~~~~~~~~~ 399 (512)
T 1zvo_C 328 DAHLTWEVAGKV-PTGGVEEGLLERHSNGSQSQH-------SRLTLPRSLWNAGTSVTCTLNHPSLPPQRLMALREPAAQ 399 (512)
T ss_pred CeEEEEEECCEe-ccCceeccceecCCCCeEEEE-------EEEEEchHHhcCCCeEEEEEEeCCCCCCceeEEeecCCC
Confidence 468999998742 22 110 0011123333321 16899999999999999999987 322 22222111
Q ss_pred -eccceeeecCCcEEEcCCCcEE-EEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 75 -VEPITQIIGGPDMYINKGSTMN-LTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 75 -~~~p~~~~~~~~~~v~~g~~~~-l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
..+|.+...++.. +|+.+. |.|.+.|.+.|...+.|++||.++..+
T Consensus 400 ~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~ 447 (512)
T 1zvo_C 400 APVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTS 447 (512)
T ss_pred CCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCc
Confidence 2345444333322 788899 999999964344589999999988654
No 230
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.10 E-value=1.5e-10 Score=83.45 Aligned_cols=111 Identities=15% Similarity=0.182 Sum_probs=65.0
Q ss_pred CcEEEEEEcCceeEEEEc--ceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEE----Ee
Q psy1826 3 LAQISWVRHRDIHLLTVS--GYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLS----VV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~--~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~----v~ 75 (169)
.+.|.|+|++. .+.... ......+.+|... ..|.|......|.|.|.|++.+. ........+. +.
T Consensus 57 ~i~v~W~k~g~-~l~~~~~~~~~~~~~g~~~~~-------s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~ 128 (240)
T 4acp_A 57 EVKFNWYVDGV-EVHNAKTKPREEQYNSTYRVV-------SVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQP 128 (240)
T ss_dssp CCEEEEEETTE-EECCCEECCCEEC---CEEEE-------EEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCC
T ss_pred ccEEEEEECCc-ccCCceeccceECCCCeEEEE-------EEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCC
Confidence 46899999874 221110 0011123444422 16788777777899999999987 3222222222 23
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
.+|.+...+......+|+.+.|.|.+.+...++..++|++||.++.
T Consensus 129 ~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~ 174 (240)
T 4acp_A 129 REPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 174 (240)
T ss_dssp BCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred CCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECC
Confidence 4555444443322234889999999999532335899999999864
No 231
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.10 E-value=6.6e-11 Score=89.06 Aligned_cols=111 Identities=14% Similarity=0.111 Sum_probs=64.9
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEE---------
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLS--------- 73 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~--------- 73 (169)
..|.|+|++..............+.++... ..|.|.++..+| |.|.|.+.|. +.......+.
T Consensus 152 ~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~-------s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~ 223 (344)
T 1za6_B 152 VTVSWNSGALTSGVHTFPAVLQSSGLYSLS-------SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHT 223 (344)
T ss_dssp CCEEETTTTBCTTEEECCCEECTTSCEEEE-------EEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC-----
T ss_pred eEEEEecCCccCceeECCCeECCCCCEEEE-------EEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccc
Confidence 578999876421111111111233444421 178999999888 9999999987 4322222211
Q ss_pred ---------------EeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 74 ---------------VVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 74 ---------------v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
+..+|.+...++.....+|..+.|.|.+.|.+.|.+.++|++||.++..
T Consensus 224 ~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 287 (344)
T 1za6_B 224 CPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENN 287 (344)
T ss_dssp ---------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCS
T ss_pred cCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCC
Confidence 1234443333222112346679999999996434579999999987753
No 232
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.07 E-value=1.1e-09 Score=87.23 Aligned_cols=77 Identities=14% Similarity=0.219 Sum_probs=48.1
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecC-CcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCE
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGG-PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTE 118 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~-~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~ 118 (169)
.+|.|.+++..|+|.|.|.+.+. +.......+.|. |..+..+ .......++.+.|.|.+.|. |.|.+.|++++.
T Consensus 103 ~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~--~~~~~~~~~p~~~~~~~~~~L~C~a~G~--P~P~i~W~~~~~ 178 (527)
T 3qs9_E 103 VSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIR--NTLLYTLRRPYFRKMENQDALVCISESV--PEPIVEWVLCDS 178 (527)
T ss_dssp EEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-------CEEEEEEEECSSSSCEEEEEEES--SCCEEEEEEC--
T ss_pred EEEEECcCChhhCeeEEEEEEeccccEEEEEEEEEC--CceeeccCCCcEEecCCceEEEEEEcee--cCCeEEEEECCC
Confidence 37999999999999999999886 433333344333 3222211 12234457778899999996 567999999877
Q ss_pred Eee
Q psy1826 119 VSQ 121 (169)
Q Consensus 119 ~~~ 121 (169)
++.
T Consensus 179 ~~~ 181 (527)
T 3qs9_E 179 QGE 181 (527)
T ss_dssp ---
T ss_pred CCc
Confidence 653
No 233
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.06 E-value=8.5e-10 Score=84.00 Aligned_cols=106 Identities=18% Similarity=0.256 Sum_probs=69.9
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCC-CeEEEEEEEcC-CCce---EEEEEEEec--
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRD-SGIYECQVSTT-PPIG---ISMYLSVVE-- 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D-~G~Y~C~~~~~-~~~~---~~~~l~v~~-- 76 (169)
..|.|+|++.... ..+.|+. ...++ .|.|.++...| +|.|.|.+.+. +... ....+.+..
T Consensus 147 ~~v~W~~~~~~~~--------~~~~~~~-~~~~~----~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~ 213 (404)
T 3p3y_A 147 PVIFWMSSSMEPI--------TQDKRVS-QGHNG----DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTR 213 (404)
T ss_dssp CEEEEECTTSCBC--------CCCSSEE-ECTTS----CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCS
T ss_pred CeEEEeCCCcccc--------CCCCcEE-EcCCC----cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccC
Confidence 4789998763211 1224544 33444 79999999999 59999999987 3321 123445542
Q ss_pred -----cceeeecC---CcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 77 -----PITQIIGG---PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 77 -----~p~~~~~~---~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+|.+.... ....+.+|+.+.|.|.+.+. |.|.+.|++++.++....
T Consensus 214 ~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~--p~~~v~W~~~~~~~~~~~ 267 (404)
T 3p3y_A 214 GVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGV--PTPDIAWYKKGGDLPSDK 267 (404)
T ss_dssp CCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCS--SCCEEEEEETTBCCCTTT
T ss_pred CccccCCccccccCCCCCceEecCCCEEEEEEECCC--CCCcEEEEECCEECCCCc
Confidence 22222211 13568899999999999886 456999999998876543
No 234
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.05 E-value=4.5e-10 Score=92.34 Aligned_cols=79 Identities=24% Similarity=0.346 Sum_probs=33.0
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecC---CcEEEcCCCcEEEEEEeecCCCCCCeeEEEECC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGG---PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNT 117 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~---~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~ 117 (169)
.|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.+.... ....+.+|+.+.|.|.+.+. |++.+.|+++|
T Consensus 291 ~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~--p~~~v~W~~~g 368 (772)
T 3v2a_R 291 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGY--PPPEIKWYKNG 368 (772)
T ss_dssp EEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC-----------------------------------------
T ss_pred EEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeee--CCCeEEEEECC
Confidence 7999999999999999999987 556667788888877544332 35678899999999999986 45699999999
Q ss_pred EEeec
Q psy1826 118 EVSQL 122 (169)
Q Consensus 118 ~~~~~ 122 (169)
.++..
T Consensus 369 ~~l~~ 373 (772)
T 3v2a_R 369 IPLES 373 (772)
T ss_dssp -----
T ss_pred EeCCC
Confidence 88765
No 235
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.04 E-value=1.3e-10 Score=84.92 Aligned_cols=81 Identities=12% Similarity=0.196 Sum_probs=62.8
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecccee-eecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC-
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQ-IIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN- 116 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~-~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~- 116 (169)
...|.|.+++.+|+|.|.|.+.+. +.....+.|.|..+|.. ...+....+.+|+.+.|.|.+.+ |.+.+.+.|+++
T Consensus 50 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~ 128 (292)
T 4dkd_C 50 SSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVR 128 (292)
T ss_dssp EEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGG
T ss_pred eEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecC
Confidence 348999999999999999999887 55677788888877653 44566788999999999999987 444479999986
Q ss_pred CEEee
Q psy1826 117 TEVSQ 121 (169)
Q Consensus 117 ~~~~~ 121 (169)
+.++.
T Consensus 129 ~~~~~ 133 (292)
T 4dkd_C 129 GRPLM 133 (292)
T ss_dssp GCCCC
T ss_pred CCccc
Confidence 55443
No 236
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.04 E-value=1.8e-09 Score=78.09 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=52.9
Q ss_pred EEEEcCC---CCCCCeE--EEEEEEcC-CCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 42 TLQIKYP---QKRDSGI--YECQVSTT-PPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 42 ~L~I~~v---~~~D~G~--Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.+.+..+ +.+|+|. |.|.+.+. +.....+.|.|...|..........+.+|+.+.|.|.+. |.+.++|
T Consensus 57 ~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~----p~~~i~W-- 130 (265)
T 2oz4_A 57 SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH----PRAKVTL-- 130 (265)
T ss_dssp EEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC----TTSEEEE--
T ss_pred eEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc----CCCEEEE--
Confidence 4555444 7788885 99999998 666667788887533222223455678899999999987 4569999
Q ss_pred CCEEee
Q psy1826 116 NTEVSQ 121 (169)
Q Consensus 116 ~~~~~~ 121 (169)
+|.++.
T Consensus 131 ~g~~~~ 136 (265)
T 2oz4_A 131 NGVPAQ 136 (265)
T ss_dssp SSCSSS
T ss_pred CCEEcc
Confidence 777663
No 237
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.03 E-value=1.6e-09 Score=83.99 Aligned_cols=79 Identities=14% Similarity=0.227 Sum_probs=62.6
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceee-ecCCcEEEcCCCcEEEEEEeecCCCCCC---eeEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQI-IGGPDMYINKGSTMNLTCVIKHSPEPPP---AIYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~-~~~~~~~v~~g~~~~l~C~~~~~p~p~~---~i~W~~~ 116 (169)
.|.|.+++. |+| |.|.+.+. +.....+.|.|..+|... ..+....+.+|+.+.|.|.+.+.| ++ .+.|+++
T Consensus 51 ~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~--~~~~~~v~W~k~ 126 (450)
T 1z7z_I 51 VYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGA--PRANLTVVLLRG 126 (450)
T ss_dssp EEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCB--CGGGEEEEEEET
T ss_pred EEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCC--CCcCcEEEEeeC
Confidence 788999987 999 99999765 445556788888777655 345567899999999999999964 44 8999999
Q ss_pred CEEeeccc
Q psy1826 117 TEVSQLNL 124 (169)
Q Consensus 117 ~~~~~~~~ 124 (169)
+.++....
T Consensus 127 g~~l~~~~ 134 (450)
T 1z7z_I 127 EKELKREP 134 (450)
T ss_dssp TEEEEEEE
T ss_pred CEEeeccc
Confidence 99886543
No 238
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.02 E-value=1e-08 Score=73.30 Aligned_cols=116 Identities=19% Similarity=0.235 Sum_probs=69.4
Q ss_pred CcEEEEEEcCce---eEEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC---------CceE
Q psy1826 3 LAQISWVRHRDI---HLLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP---------PIGI 68 (169)
Q Consensus 3 ~~~V~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~---------~~~~ 68 (169)
...|.|+|+..+ ..+....... ....|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. ....
T Consensus 32 ~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~ 111 (229)
T 1hxm_A 32 NYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTLGMGGEYTDKLIFGK 111 (229)
T ss_dssp GSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECCCCSSSCCCCCEEBC
T ss_pred cceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEecCCCcccccchhhcCc
Confidence 357999986421 1221111111 1257888655433467799999999999999999997741 1223
Q ss_pred EEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 69 SMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 69 ~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
...|.|..... ...++.+.+..+ .+.|.|.+.+...+++.+.|.++ .++.
T Consensus 112 gt~L~V~~~~~-~~~~P~v~~~~~-~~~L~C~~~g~~P~~i~v~W~~~-~~~~ 161 (229)
T 1hxm_A 112 GTRVTVEPRSQ-PHTKPSVFVMKN-GTNVACLVKEFYPKDIRINLVSS-KKIT 161 (229)
T ss_dssp CEEEEEECCSC-CCBCCEEEEEEE-TTEEEEEEESCBSSCCEEEEECS-SEEE
T ss_pred cEEEEEeccCC-CCcCCcEEEcCC-CCeEEEEEEEEeCCCEEEEEecC-CEEe
Confidence 35677664211 111222332222 24899999987423359999998 6654
No 239
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.00 E-value=5.6e-10 Score=86.98 Aligned_cols=74 Identities=23% Similarity=0.287 Sum_probs=47.9
Q ss_pred CCCCC---CeEEEEEEEcC-CCceEEEEEE----EeccceeeecCC-cEEEcCCCcEEEEEEeecCCCCCCeeEEEECCE
Q psy1826 48 PQKRD---SGIYECQVSTT-PPIGISMYLS----VVEPITQIIGGP-DMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTE 118 (169)
Q Consensus 48 v~~~D---~G~Y~C~~~~~-~~~~~~~~l~----v~~~p~~~~~~~-~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~ 118 (169)
+...| +|.|.|.+.|. ........+. +..+|.+...++ ...+..|+ +.|.|.+.|.+.|++.+.|++||.
T Consensus 318 i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~ 396 (457)
T 1hzh_H 318 VLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQ 396 (457)
T ss_dssp CCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCE
Confidence 44555 99999999976 3332222332 234555444433 23344555 999999999643446999999999
Q ss_pred Eeec
Q psy1826 119 VSQL 122 (169)
Q Consensus 119 ~~~~ 122 (169)
++..
T Consensus 397 ~l~~ 400 (457)
T 1hzh_H 397 PENN 400 (457)
T ss_dssp ECCC
T ss_pred ECcc
Confidence 8854
No 240
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.54 E-value=4.4e-11 Score=82.99 Aligned_cols=113 Identities=15% Similarity=0.117 Sum_probs=67.6
Q ss_pred EEEEEEcCceeEEE---Ec--ceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc-
Q psy1826 5 QISWVRHRDIHLLT---VS--GYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP- 77 (169)
Q Consensus 5 ~V~W~k~~~~~~~~---~~--~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~- 77 (169)
.|.|+|+..+..+. .. ........|+.+......+.+.|.|.+++.+|+|.|.|.+.+. ........|.|...
T Consensus 31 ~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~fg~gT~L~V~~~~ 110 (185)
T 3c6l_A 31 YFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDSATYFCAASDNRIFFGDGTQLVVKPNI 110 (185)
Confidence 58999875322111 10 0001124677754333335668999999999999999998753 12233345555432
Q ss_pred ----ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 78 ----ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 78 ----p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
|.+....+ ....+.|.|.+.++ .|.|.|.|+.++..+..+
T Consensus 111 ~~~~P~V~~~~~-----~~~~vtL~C~~~gf-~P~p~v~~~~~~~~~~~~ 154 (185)
T 3c6l_A 111 QNPEPAVYQLKD-----PRSQDSTLCLFTDF-DSQINVPKTMESGTFITD 154 (185)
Confidence 22221111 12268999999997 478899998876655443
No 241
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=98.97 E-value=2e-09 Score=75.43 Aligned_cols=118 Identities=18% Similarity=0.232 Sum_probs=72.1
Q ss_pred cEEEEEEcCceeE---E-EEcc-eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEEec
Q psy1826 4 AQISWVRHRDIHL---L-TVSG-YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~---~-~~~~-~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v~~ 76 (169)
..+.|+|+..+.. + .... .......|+.+........+.|.|.+++.+|+|.|.|.+... ........|.|..
T Consensus 30 ~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca~~~~~~~~fG~GT~L~V~~ 109 (200)
T 3rgv_A 30 PTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQEIDSAVYYCAANSGTYQRFGTGTKLQVVP 109 (200)
T ss_dssp CEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCEEEEEEEESSSCCCCCCCEEEEEEC
T ss_pred cEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcCccCCCEEEEeccCcccccCcCEEEEEeC
Confidence 4689999642211 1 1110 001124788865444456779999999999999999998643 2233445666654
Q ss_pred cceeeecCCcE--EEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 77 PITQIIGGPDM--YINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 77 ~p~~~~~~~~~--~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
... ...+.+ .......+.|.|.+.+.. |...++|.++|..+..+.
T Consensus 110 ~~~--~~~P~V~~~~~~~~~~tl~Cl~~gf~-P~i~v~~~~~g~~~~~~~ 156 (200)
T 3rgv_A 110 NIQ--NPDPAVYQLRDSKSSDKSVCLFTDFD-SQTNVSQSKDSDVYITDK 156 (200)
T ss_dssp CCS--SCCCEEEEEEESSSSSCEEEEEESCC-TTCCCCCCSSTTCEECCC
T ss_pred CCC--CCCCeEEEccCCCCCceEEEEccccc-CCeEeEeccCCcEEeecc
Confidence 200 011111 111123367999999985 578999999998776644
No 242
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.96 E-value=8.1e-10 Score=79.95 Aligned_cols=75 Identities=13% Similarity=0.116 Sum_probs=59.8
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC--CCce---EEEEEEEeccceeeec--CCcEEEcCCCcEEEEEEeecCCCCCCeeEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT--PPIG---ISMYLSVVEPITQIIG--GPDMYINKGSTMNLTCVIKHSPEPPPAIYWL 114 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~--~~~~---~~~~l~v~~~p~~~~~--~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~ 114 (169)
.|.|..+..+|.|.|.|.+.+. +... ..+.|.|..+|.+... +....+.+|+.+.|.|.+.|. |.|.+.|+
T Consensus 143 ~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~--P~p~i~W~ 220 (265)
T 2oz4_A 143 QLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGN--PLPELKCL 220 (265)
T ss_dssp CCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEE--SCCEEEEE
T ss_pred EEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccC--CCCeEEEE
Confidence 5788999999999999999754 4433 5677888877765443 346788999999999999996 45699999
Q ss_pred ECCE
Q psy1826 115 HNTE 118 (169)
Q Consensus 115 ~~~~ 118 (169)
+++.
T Consensus 221 ~~~~ 224 (265)
T 2oz4_A 221 KDGT 224 (265)
T ss_dssp ETTT
T ss_pred ECCc
Confidence 9987
No 243
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.91 E-value=3.8e-10 Score=84.10 Aligned_cols=78 Identities=13% Similarity=0.219 Sum_probs=51.1
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEE---ecccee-eecCCcEEEcCCCcEEEEEEeecCCCCCC---eeEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSV---VEPITQ-IIGGPDMYINKGSTMNLTCVIKHSPEPPP---AIYW 113 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v---~~~p~~-~~~~~~~~v~~g~~~~l~C~~~~~p~p~~---~i~W 113 (169)
.|.|.++..+|+|.|.|.+.+. +.....+.+.+ ...|.+ +..+....+.+|+.+.|.|.+.+.+ |.| .+.|
T Consensus 73 ~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~-P~p~~~~i~W 151 (323)
T 2wqr_A 73 ELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLA-PSKGTVQLTW 151 (323)
T ss_dssp EEEEEHHHHHTTCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEEC-CCSSCCEEEE
T ss_pred EEEEcHHHcCCCCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccC-CCCCceEEEE
Confidence 6788888888999999999986 22221111100 112332 3334445678899999999999863 444 9999
Q ss_pred EECC-EEe
Q psy1826 114 LHNT-EVS 120 (169)
Q Consensus 114 ~~~~-~~~ 120 (169)
++++ ..+
T Consensus 152 ~k~~g~~~ 159 (323)
T 2wqr_A 152 SRASGKPV 159 (323)
T ss_dssp EETTCCCC
T ss_pred EECCCccc
Confidence 9964 444
No 244
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.89 E-value=6.1e-09 Score=75.97 Aligned_cols=68 Identities=12% Similarity=0.261 Sum_probs=49.0
Q ss_pred CCCCeEEEEEEEcCC--CceEEEEEEEec--cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEE
Q psy1826 50 KRDSGIYECQVSTTP--PIGISMYLSVVE--PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEV 119 (169)
Q Consensus 50 ~~D~G~Y~C~~~~~~--~~~~~~~l~v~~--~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~ 119 (169)
..|+|.|.|.+.+.. ..+....+.|.. +|.+...+....+.+|+.+.|.|.+.+. |.|.+.|++++..
T Consensus 150 ~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~--p~p~v~W~~~~~~ 221 (289)
T 3mjg_X 150 IFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGN--EVVNFEWTYPRKE 221 (289)
T ss_dssp CCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESC--SSBEEEEECTTSS
T ss_pred eccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCC--CCcceEEEcCCcc
Confidence 579999999998752 222234555554 4554544555778899999999999995 5679999987654
No 245
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=98.89 E-value=5.2e-09 Score=74.79 Aligned_cols=117 Identities=18% Similarity=0.209 Sum_probs=72.0
Q ss_pred cEEEEEEcCceeE----EEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-----CceEEEEEEE
Q psy1826 4 AQISWVRHRDIHL----LTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-----PIGISMYLSV 74 (169)
Q Consensus 4 ~~V~W~k~~~~~~----~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-----~~~~~~~l~v 74 (169)
..|.|+|+..+.. ....... ...+|+.+........+.|.|.+++.+|+|.|.|.+.... .......|.|
T Consensus 30 ~~v~Wyrq~pg~~~~~l~~~~~~~-~~~~Rfs~~~~~~~~~~sLtI~~lq~~DSG~Y~Ca~~~~~~~~~~~fG~GT~L~V 108 (229)
T 3mbe_C 30 KSVQWFQQNHRGRLITLFYLAQGT-KENGRLKSTFNSKERYSTLHIKDAQLEDSGTYFCAAEDGGSGNKLIFGTGTLLSV 108 (229)
T ss_dssp SCEEEEEECSSSCBCCCEEESSEE-EEETTEEEEEETTTTEEEEEECSCCSTTCBEEEEEEECSSSTTCEEECCCCEEEE
T ss_pred cEEEEEEECCCCCcEEEEEeCCCC-ccCCCEEEEECCCCCEEEEEEECCcccCCCCEEEEEEeCCCcccceeCCCEEEEE
Confidence 3689998643211 1111111 2347888655445578899999999999999999987521 1223346666
Q ss_pred eccceeeecCCcE--EEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 75 VEPITQIIGGPDM--YINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 75 ~~~p~~~~~~~~~--~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
..... ...+.+ .......+.|.|.+.+.. |...++|.+++..+..+.
T Consensus 109 ~~~~~--~p~P~Vf~~~~~~~~vtl~Cl~~gf~-P~i~v~~~~~~~~~~~~~ 157 (229)
T 3mbe_C 109 KPNIQ--NPEPAVYQLKDPRSQDSTLCLFTDFD-SQINVPKTMESGTFITDK 157 (229)
T ss_dssp ECCCS--SCCCEEEEEECTTCTTCEEEEEESCC-SSSCCCCCCSSSEEECCC
T ss_pred ecccC--CCCCEEEEccCCCCCEEEEEEccccC-CceEeEeeccCceEecCc
Confidence 53200 011111 112223478999999984 678999999988775443
No 246
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.88 E-value=3.6e-09 Score=66.73 Aligned_cols=64 Identities=19% Similarity=0.372 Sum_probs=45.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p 78 (169)
-.|.|+|++. .+ ..+.|+.+... .....|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|
T Consensus 43 p~v~W~k~g~--~l-------~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 43 PVVVWEKGGQ--QL-------AASERLSFPAD--GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp CEEEEEETTE--EC-------CCCSSEECCEE--TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred CEEEEEECcc--cc-------cceeeEEEeec--CceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEEEcCC
Confidence 3689999873 22 12345553332 24558999999999999999999998 777777888887765
No 247
>3tjh_C 42F3 alpha; IG MHC, antigen recognition, TCR-PMHC, membrane receptor, IM system; 2.12A {Mus musculus} PDB: 3tpu_A 3tfk_C 1j8h_D* 1fyt_D* 4gkz_A* 3rev_A 1mwa_A* 1g6r_A* 1tcr_A* 2ckb_A 1zgl_M 3c5z_A 1i9e_A* 2oi9_B 2e7l_A 2icw_I 3e2h_B 3e3q_D 4h1l_G
Probab=98.88 E-value=7.7e-09 Score=73.75 Aligned_cols=94 Identities=17% Similarity=0.242 Sum_probs=60.5
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC---C--CceEEEEEEEeccceeeecCCcE--EEcCCCcEEEEEE
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT---P--PIGISMYLSVVEPITQIIGGPDM--YINKGSTMNLTCV 100 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~---~--~~~~~~~l~v~~~p~~~~~~~~~--~v~~g~~~~l~C~ 100 (169)
+|+.+........+.|.|.+++.+|+|.|.|.+... . .......|.|.... ....+.+ .......+.|.|.
T Consensus 69 ~Rfs~s~~~~~~~~sLtI~~lq~~DSG~YyCa~~~~~~~~~~~fG~GT~LtV~~~~--~~~~P~V~~~~~~~~~~tl~Cl 146 (226)
T 3tjh_C 69 NGFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPNI--QNPDPAVYQLRDSKSSDKSVCL 146 (226)
T ss_dssp GGEEEEEETTTTEEEEEESSCCGGGCEEEEEEEEESSCSSSEEECCCEEEEEECCC--SSCCCEEEEEEECC---CEEEE
T ss_pred CcEEEEEcCCCCEEEEEEecCCcccCCCEEEEEEecCCccccccCCCeEEEEeCCC--CCCCCEEEEcccCCCCeEEEEE
Confidence 788865545567889999999999999999998742 1 12223466665420 0011111 1111134789999
Q ss_pred eecCCCCCCeeEEEECCEEeeccc
Q psy1826 101 IKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 101 ~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+.+.. |+..++|.++|..+..+.
T Consensus 147 ~~~f~-P~i~v~~~~~~~~~~~~~ 169 (226)
T 3tjh_C 147 FTDFD-SQTNVSQSKDSDVYITDK 169 (226)
T ss_dssp EESCC-TTCCCCCCSCTTEEECCC
T ss_pred ccccc-CCcEEEeeccCceeecCc
Confidence 99984 678999999998876654
No 248
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.86 E-value=1.3e-08 Score=63.38 Aligned_cols=77 Identities=18% Similarity=0.309 Sum_probs=51.2
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccccccee-ecceeeEEEEEEEEeeEEEEeeecee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRES-ESSSFVKRLVVLLSVSIVELTWKLEA 155 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (169)
||.+...+.++.+.+|+.+.|.|.+.|. |.|.+.|+++|.++......+.. ........+. +.....+|.+
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~--P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~------I~~~~~~D~G 76 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGE--PTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLI------IMDVQKQDGG 76 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEE--SCCEEEEEETTEECCTTGGGTEEEEECSSEEEEE------ESSCCGGGCE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEe--cCCEEEEEECceEeeeeccceeeeecccceEEEE------EcCCCccCCE
Confidence 5666656678899999999999999996 45699999999998765443322 1111122222 3345566666
Q ss_pred eEEEee
Q psy1826 156 TYILAG 161 (169)
Q Consensus 156 ~~~~~~ 161 (169)
.|.+..
T Consensus 77 ~Y~C~a 82 (100)
T 3knb_A 77 LYTLSL 82 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666643
No 249
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.85 E-value=7.5e-09 Score=78.62 Aligned_cols=84 Identities=20% Similarity=0.222 Sum_probs=45.6
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|++.+.. ..... ..+.|+.. ..+ .|.|.+++.+|+|.|.|.|.|. +.....+.+.|...+
T Consensus 275 p~i~W~~~~~~-~~~~~----~~~~r~~~--~~~----~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~~---- 339 (361)
T 2xot_A 275 MTKVWVSPSNE-QVLSQ----GSNGSVSV--RNG----DLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYNFT---- 339 (361)
T ss_dssp CEEEEECTTSC-BCCSC----CSSSSEEE--ETT----EEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEEESSC----
T ss_pred CeEEEEeCCCe-eEeec----ccCCceEe--ecC----eEEEeecCcccCEEEEEEEecCCCccEEEEEEEEEeee----
Confidence 46899986642 21110 12346764 455 8999999999999999999998 666666777775432
Q ss_pred cCCcEEEcCCCcEEEEEEeecCCCCCCee
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i 111 (169)
.+|..+.|.|.+.|.| .|.|
T Consensus 340 -------~~g~~~~l~C~~~g~P--~P~i 359 (361)
T 2xot_A 340 -------LHGHHDTLNAAADPWS--HPQF 359 (361)
T ss_dssp -------CC--------------------
T ss_pred -------ccCCceEEEEEeCCCC--CCcc
Confidence 5688899999999975 4454
No 250
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.84 E-value=5.2e-08 Score=80.08 Aligned_cols=81 Identities=14% Similarity=0.167 Sum_probs=54.3
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCce--EEEEEEEec--cceeeecC-CcEEEcCCCcEEEEEEeecCCCCCCeeEEEEC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTTPPIG--ISMYLSVVE--PITQIIGG-PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHN 116 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~~~~~--~~~~l~v~~--~p~~~~~~-~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 116 (169)
.|.|.+++.+|+|.|.|.+.+.+... ....+.+.. ++.+...+ ....+.+|+.+.|.|.+.+.+.|.+.+.|+++
T Consensus 184 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~ 263 (772)
T 3v2a_R 184 GFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYP 263 (772)
T ss_dssp EEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC
T ss_pred CeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecC
Confidence 79999999999999999998762211 112333332 22333333 34789999999999999986556679999999
Q ss_pred CEEeec
Q psy1826 117 TEVSQL 122 (169)
Q Consensus 117 ~~~~~~ 122 (169)
+..+..
T Consensus 264 ~~~~~~ 269 (772)
T 3v2a_R 264 SSKHQH 269 (772)
T ss_dssp ------
T ss_pred CccCCC
Confidence 877544
No 251
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.84 E-value=2.9e-08 Score=61.83 Aligned_cols=73 Identities=18% Similarity=0.322 Sum_probs=51.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p 78 (169)
..|.|+|.+. ..+.........+.|+.+.... .....|.|.+++.+|+|.|.|.+.+.+.....+.|.|..+|
T Consensus 36 ~~v~W~~~~~-~~~~~~~~~~~~~~r~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 36 TSLQWSNPAQ-QTLYFDDKKALRDNRIELVRAS-WHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVP 108 (108)
T ss_dssp CCEEEECTTC-CEEEETTEECSCCTTEEEEEES-SSEEEEEECSCCGGGCEEEEEEECSSSCEEEEEEEEEECCC
T ss_pred cEEEEEcCCC-ceEEEcCCcccccCcEEEeecC-CCcEEEEECCCChhHCeEEEEEEEcCCCcEEEEEEEEEcCC
Confidence 4689998764 2333333333455688754432 35668999999999999999999886556667788887664
No 252
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.82 E-value=1.3e-08 Score=74.27 Aligned_cols=74 Identities=14% Similarity=0.311 Sum_probs=50.3
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CC---ceEEEEEEEeccce-eeecCCc---EEEcCCCcEEEEEEeecCCCCCCeeE
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PP---IGISMYLSVVEPIT-QIIGGPD---MYINKGSTMNLTCVIKHSPEPPPAIY 112 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~---~~~~~~l~v~~~p~-~~~~~~~---~~v~~g~~~~l~C~~~~~p~p~~~i~ 112 (169)
..|.|.+++.+|+|.|.|.+.|. +. ....+.+.|..++. ++..... ..+.+|+.+.|.|.+. . |.|.++
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~--p~~~v~ 127 (289)
T 3mjg_X 51 SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-D--PQLVVT 127 (289)
T ss_dssp EEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-C--TTSCEE
T ss_pred EEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-C--CCceEE
Confidence 38999999999999999999886 33 33344444443322 2222222 6789999999999998 4 345888
Q ss_pred EEECC
Q psy1826 113 WLHNT 117 (169)
Q Consensus 113 W~~~~ 117 (169)
|++++
T Consensus 128 w~~~~ 132 (289)
T 3mjg_X 128 LHEKK 132 (289)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 88754
No 253
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=98.81 E-value=3.3e-08 Score=69.30 Aligned_cols=102 Identities=19% Similarity=0.191 Sum_probs=61.3
Q ss_pred cEEEEEEcCceeE---E-EEcc-eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC----C--CceEEEEE
Q psy1826 4 AQISWVRHRDIHL---L-TVSG-YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT----P--PIGISMYL 72 (169)
Q Consensus 4 ~~V~W~k~~~~~~---~-~~~~-~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~----~--~~~~~~~l 72 (169)
..|.|+|+..+.. + .... .....+.|+.+......+.+.|.|.+++.+|+|.|.|.+.+. . .......|
T Consensus 30 ~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~g~gt~L 109 (203)
T 2bnu_A 30 YNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGDSATYLCAVRPTSGGSYIPTFGRGTSL 109 (203)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEEECSSSTTCCEECCCEEE
T ss_pred ceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCcccCeEEEEEEEcCcCcceeeeeCCCEEE
Confidence 3689998753211 1 1110 001134788866544457789999999999999999999763 1 11233466
Q ss_pred EEecc-----ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCee
Q psy1826 73 SVVEP-----ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 73 ~v~~~-----p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i 111 (169)
.|... |.+.... .....+.|.|.+.++ .|.|.+
T Consensus 110 ~V~~~~~~~~P~V~~~~-----~~~~~~~L~C~~~g~-~P~p~v 147 (203)
T 2bnu_A 110 IVHPYIQNPDPAVYQLR-----RSKSSDKSVCLFTDF-DSQTNV 147 (203)
T ss_dssp EEECCCSSCCCEEEEEC-----CSSSSSCEEEEEESC-CTTCCC
T ss_pred EEeCCCCCCCCeEEecC-----CCCCCcEEEEEcccc-ccCccc
Confidence 66542 2221111 122378999999995 355577
No 254
>1oga_D T-cell receptor alpha chain V region, beta-2-microglobulin; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2xna_A 2xn9_A 2vlm_D 2vlk_D 2vlj_D 2vlr_D 2cdf_A 2wbj_C* 3qdm_D 3qeq_D
Probab=98.79 E-value=3.2e-08 Score=70.07 Aligned_cols=106 Identities=23% Similarity=0.346 Sum_probs=62.7
Q ss_pred CcEEEEEEcCcee---EE-EEcc-eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C--CceEEEEEEE
Q psy1826 3 LAQISWVRHRDIH---LL-TVSG-YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P--PIGISMYLSV 74 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~-~~~~-~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~--~~~~~~~l~v 74 (169)
...|.|+|+..+. .+ .... .....+.|+.+......+.+.|.|.+++.+|+|.|.|.+... . .......|.|
T Consensus 29 ~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~fg~gt~L~V 108 (215)
T 1oga_D 29 FSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRLTFQFGDARKDSSLHITAAQPGDTGLYLCAGAGSQGNLIFGKGTKLSV 108 (215)
T ss_dssp CSCEEEEEECTTSCCEEEEEECSTTCEEEETTEEEEECTTSSEEEEEESSCCGGGCEEEEEEEECTTSSEEECCCEEEEE
T ss_pred CceEEEEEeCCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEecccccceeCCCEEEEE
Confidence 3579999975321 11 1111 011134788876555567889999999999999999999763 1 1122346666
Q ss_pred eccceeeecCCcEE--EcCCCcEEEEEEeecCCCCCCee
Q psy1826 75 VEPITQIIGGPDMY--INKGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 75 ~~~p~~~~~~~~~~--v~~g~~~~l~C~~~~~p~p~~~i 111 (169)
...+. ...+.+. ......+.|.|.+.++ .|.|.+
T Consensus 109 ~~~~~--~~~P~V~~~~~~~~~vtL~C~~~gf-~P~p~v 144 (215)
T 1oga_D 109 KPNIQ--NPDPAVYQLRDSKSSDKSVCLFTDF-DSQTNV 144 (215)
T ss_dssp ECCCS--SCCCEEEEEEBSSSSSCEEEEEESC-CTTCCC
T ss_pred eccCC--CcCCEEEEcCCCCCCeEEEEEcccc-ccCccc
Confidence 54211 0111111 1123478999999996 355666
No 255
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=1.7e-08 Score=62.83 Aligned_cols=64 Identities=14% Similarity=0.203 Sum_probs=46.6
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
..|.|+|++. .+. .+.|+.+... + ....|.|.++..+|+|.|.|.+.|. .....+.|.|..+|.
T Consensus 35 p~v~W~k~g~-~l~--------~~~r~~i~~~-~-~~~~L~I~~v~~~D~G~Y~C~a~N~-~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 35 IPGKWTKNGL-PVQ--------ESDRLKVVQK-G-RIHKLVIANALTEDEGDYVFAPDAY-NVTLPAKVHVISGPS 98 (100)
T ss_dssp CCEEEEETTE-ECC--------CCSSEEEEEC-S-SEEEEEESSCCGGGCSEEEEEESSS-CCCEEEEEEEECCSC
T ss_pred CeEEEEECCE-ECC--------CCCcEEEEEe-C-CEEEEEECCCChhhCEEEEEEEcCC-CeeEEEEEEEeCCCC
Confidence 4689999874 221 2356664332 2 3457999999999999999999997 556778888887764
No 256
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=98.78 E-value=1.2e-07 Score=75.99 Aligned_cols=111 Identities=15% Similarity=0.169 Sum_probs=68.3
Q ss_pred cEEEEEEcCceeEEEEcce-eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC--ceEEEEEEE--ecc
Q psy1826 4 AQISWVRHRDIHLLTVSGY-TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP--IGISMYLSV--VEP 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~--~~~~~~l~v--~~~ 77 (169)
+.|+|++++.......... ....+..+... ..|.|......|.+.|.|++.+. .. ....+.+.+ ..+
T Consensus 377 i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~-------s~L~i~~~~~~~~~~y~C~v~~~~~~~~~~~~~~~~~~~~~~ 449 (551)
T 1ntl_A 377 VQFSWFVDDVEVHTAQTQPREEQFNSTFRSV-------SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKA 449 (551)
T ss_pred eEEEEEECCccccccccCCceECCCCeEEEE-------EeeEcCHHHccCCceEEEEEecCCCCCCeEEEEecCCCCCcC
Confidence 6899999874221111110 01123333321 16788878888889999999886 32 223333333 345
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
|.+....+...+..|+.+.|.|.+.++..+...|+|++||.++.
T Consensus 450 P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~ 493 (551)
T 1ntl_A 450 PQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 493 (551)
T ss_pred CceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEcc
Confidence 55444333333456889999999999632457999999999875
No 257
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.77 E-value=4.2e-08 Score=61.79 Aligned_cols=76 Identities=14% Similarity=0.214 Sum_probs=51.7
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeecee
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEA 155 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (169)
.||.++..+.++.+.+|+.+.|.|.+.|.| .|.++|++||.++..+........ .....+. +.....+|.+
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P--~p~v~W~k~g~~l~~~~~~~~~~~-~~~~~L~------I~~v~~~D~G 82 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEP--PPVVVWEKGGQQLAASERLSFPAD-GAEHGLL------LTAALPTDAG 82 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEES--CCEEEEEETTEECCCCSSEECCEE-TTEEEEE------ESSCCGGGCE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEec--CCEEEEEECcccccceeeEEEeec-CceEEEE------EecCChhhCE
Confidence 367777777889999999999999999964 569999999999876543322211 1112222 3445566666
Q ss_pred eEEEe
Q psy1826 156 TYILA 160 (169)
Q Consensus 156 ~~~~~ 160 (169)
.|.+.
T Consensus 83 ~Y~C~ 87 (107)
T 3knb_B 83 VYVCR 87 (107)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66664
No 258
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=98.77 E-value=7.3e-09 Score=72.56 Aligned_cols=115 Identities=18% Similarity=0.164 Sum_probs=70.3
Q ss_pred cEEEEEEcCcee---EEEE-cc-eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEec
Q psy1826 4 AQISWVRHRDIH---LLTV-SG-YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~---~~~~-~~-~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v~~ 76 (169)
..+.|+|+..+. .+-. .. ......+|+.+........+.|.|.+++.+|+|.|.|.+.... .......|.|..
T Consensus 30 ~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca~~~~~~~~fG~GT~L~V~~ 109 (199)
T 3gsn_A 30 YALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQPEDSATYLCARNTGNQFYFGTGTSLTVIP 109 (199)
T ss_dssp CCEEEEEECTTSCCEEEEEECSTTCCCEETTEECCCBTTTTEEEEEBSSCCGGGCEEEEEEEESSSCEEECSCEEEEEEC
T ss_pred CEEEEEEECCCCCcEEEEEECCCCCccccCceEEEECCCCCEEEEEEccCcccCCccEEEEEcccccccCCCCEEEEEec
Confidence 368999964321 1111 10 0011246887544344578899999999999999999986531 122334666654
Q ss_pred c-----ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 77 P-----ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 77 ~-----p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
. |.+....+. + ..+.|.|.+.+.. |...++|.++|..+..+.
T Consensus 110 ~~~~~~P~V~~~~~~----~-~~~tl~Cl~~gf~-P~i~~~~~~~~~~~~~~~ 156 (199)
T 3gsn_A 110 NIQNPDPAVYQLRDS----K-SSDKSVCLFTDFD-SQTNVSQSKDSDAYITDK 156 (199)
T ss_dssp CCSSCCCEEEECCCS----S-SSSSCCEEEETCC-TTCCSSCSSCSSEEECCC
T ss_pred ccCCCCCEEEEcccC----C-CCceEEEEeeccc-CCeEeEeccCCCeEecCc
Confidence 2 222111111 1 2367889999985 578999999998876654
No 259
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.77 E-value=5e-09 Score=81.07 Aligned_cols=79 Identities=14% Similarity=0.272 Sum_probs=54.4
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec----------c--ceeeecCCcEE--EcCCCcEEEEEEeecCC-
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE----------P--ITQIIGGPDMY--INKGSTMNLTCVIKHSP- 105 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~----------~--p~~~~~~~~~~--v~~g~~~~l~C~~~~~p- 105 (169)
.|.|.++..+| |.|.|.+.|. +.......+.+.. + |.+...++... +.+|+.+.|.|.+.+.+
T Consensus 181 ~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p 259 (434)
T 1igy_B 181 SVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISK 259 (434)
T ss_dssp EEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCS
T ss_pred EEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEecccc
Confidence 68999999999 9999999997 4433333332220 0 33333333322 78999999999999873
Q ss_pred C-CCCeeEEEECCEEee
Q psy1826 106 E-PPPAIYWLHNTEVSQ 121 (169)
Q Consensus 106 ~-p~~~i~W~~~~~~~~ 121 (169)
. |++.++|++++..+.
T Consensus 260 ~P~~~~i~W~k~~~~~~ 276 (434)
T 1igy_B 260 DDPEVQFSWFVDNVEVH 276 (434)
T ss_dssp SCCCCCBCBBSSSCCBC
T ss_pred CCCCeEEEEEeCCcccC
Confidence 1 246899999987654
No 260
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=98.76 E-value=1.4e-08 Score=71.57 Aligned_cols=118 Identities=19% Similarity=0.272 Sum_probs=69.3
Q ss_pred cEEEEEEcCcee---EE-EEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC------CCceEEEEEE
Q psy1826 4 AQISWVRHRDIH---LL-TVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT------PPIGISMYLS 73 (169)
Q Consensus 4 ~~V~W~k~~~~~---~~-~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~------~~~~~~~~l~ 73 (169)
..|.|+|+..+. .+ ...........|+.+........+.|.|.+++.+|+|.|.|.+... ........|.
T Consensus 32 ~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~DsG~Y~Ca~~~~~~~~~~~~fG~GT~L~ 111 (208)
T 4ei6_A 32 QYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNNYAQGLTFGLGTRVS 111 (208)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCGGGCEEEEEEEEECCSSCCCCEECCCEEEE
T ss_pred ceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcccCCCcEEEEEecCCCccccccCCCCEEEE
Confidence 368999974321 11 1111111134788865544456789999999999999999998642 1123344666
Q ss_pred EeccceeeecCCcEE--EcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 74 VVEPITQIIGGPDMY--INKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 74 v~~~p~~~~~~~~~~--v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
|..... ...+.+. ......+.|.|.+.+.+ |+..++|.++|..+..++
T Consensus 112 V~~~~~--~~~PsVf~l~~~~~~~tl~Cl~~~f~-P~i~v~~~~~~~~~~~~~ 161 (208)
T 4ei6_A 112 VFPYIQ--NPDPAVYQLRDSKSSDKSVCLFTDFD-SQTNVSQSKDSDVYITDK 161 (208)
T ss_dssp EECCCS--SCCCEEEEEEBSSCTTCEEEEEESCC-TTCCCCCCSSTTCEECCC
T ss_pred EeCccc--CCCCEEEEcccCCCCceEEEEeeccC-CceEeeecccCcEEEeCC
Confidence 654200 0111111 11112257899999985 577999999887665543
No 261
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=98.75 E-value=4.8e-08 Score=68.93 Aligned_cols=105 Identities=18% Similarity=0.295 Sum_probs=61.7
Q ss_pred cEEEEEEcCceeE---E-EEcce-e-ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-----CceEEEEE
Q psy1826 4 AQISWVRHRDIHL---L-TVSGY-T-YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-----PIGISMYL 72 (169)
Q Consensus 4 ~~V~W~k~~~~~~---~-~~~~~-~-~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-----~~~~~~~l 72 (169)
+.|.|+|+..+.. + ..... . -..+.|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .......|
T Consensus 34 ~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~g~gt~L 113 (211)
T 2ak4_D 34 YYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDSAVYFCALSGFYNTDKLIFGTGTRL 113 (211)
T ss_dssp CEEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEECSBTTSCCEECCCEEE
T ss_pred eeEEEEEECCCCccEEEEEECCCcCccCcCCCEEEEEcCCCCEEEEEECccccccCceEEEEEEcCCCcceeeECCCEEE
Confidence 4799999753211 1 11110 0 01347888765555678899999999999999999997631 12233466
Q ss_pred EEeccceeeecCCcEEE--cCCCcEEEEEEeecCCCCCCee
Q psy1826 73 SVVEPITQIIGGPDMYI--NKGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 73 ~v~~~p~~~~~~~~~~v--~~g~~~~l~C~~~~~p~p~~~i 111 (169)
.|...+. ...+.+.+ .....+.|.|.+.++ .|.+.+
T Consensus 114 ~V~~~~~--~~~P~V~~~~~~~~~vtL~Cl~~gf-~P~~~v 151 (211)
T 2ak4_D 114 QVFPNIQ--NPDPAVYQLRDSKSSDKSVCLFTDF-DSQTNV 151 (211)
T ss_dssp EEECCCS--SCCCEEEEEBCCSSSCCEEEEEESC-CTTCCC
T ss_pred EEeCcCC--CCCCEEEEccCCCCceEEEEEeeee-cCCccc
Confidence 6653210 01111111 122378999999996 355666
No 262
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.72 E-value=6.3e-08 Score=59.57 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=51.7
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeecee
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEA 155 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (169)
.+|.+...+....+.+|+.+.|.|.+.+. |.|.+.|++++.++.................+. +.....+|.+
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~------i~~v~~~D~G 75 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGL--PAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLI------FEVVRASDAG 75 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEE--SCCEEEEEETTEEECCCSSSCEEEETTTEEEEE------ESSCCGGGCE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEee--CCCEEEEEECCEECcCCCcEEEEEcCCCeEEEE------ECCCCcccCE
Confidence 35666666677889999999999999986 456999999999887665433222222112222 3344556666
Q ss_pred eEEEee
Q psy1826 156 TYILAG 161 (169)
Q Consensus 156 ~~~~~~ 161 (169)
.|.+..
T Consensus 76 ~Y~C~a 81 (100)
T 2kdg_A 76 AYACVA 81 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 776654
No 263
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.71 E-value=3.8e-08 Score=62.74 Aligned_cols=67 Identities=21% Similarity=0.313 Sum_probs=48.0
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 79 (169)
..|.|+|++. .+.. ...|+.+.. ...+.+.|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|.
T Consensus 45 p~v~W~k~~~--~~~~------~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 45 PKLFWKRNNE--MVQF------NTDRISLYQ-DNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPN 112 (116)
T ss_dssp CEEEEEETTE--ECCC------CBTTEEEEE-CTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEECCSC
T ss_pred CEEEEEECCE--ECcC------CCCeEEEEe-CCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEeCCCC
Confidence 3789999874 2111 125666433 3335668999999999999999999998 6666777888876654
No 264
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=98.70 E-value=6.9e-07 Score=63.84 Aligned_cols=112 Identities=18% Similarity=0.294 Sum_probs=73.4
Q ss_pred CCcEEEEEEcCceeEEEEcc----------eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEE
Q psy1826 2 SLAQISWVRHRDIHLLTVSG----------YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISM 70 (169)
Q Consensus 2 ~~~~V~W~k~~~~~~~~~~~----------~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~ 70 (169)
.++.+.|+|+.++.-++--. +.-....|+.+..++..+...|.|.+++.+|...|.|..... ..-.+..
T Consensus 30 ~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLqm~sL~~eDTAvYYCAr~~~~d~WGqGT 109 (254)
T 4f9p_D 30 TSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLSSLTSDDSAVYFCARSDYGAYWGQGT 109 (254)
T ss_dssp GGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEECEESSSCCEECCCE
T ss_pred hhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeEEccCCCCCCEEEEEEecCCCCCcCCCE
Confidence 45679999975432221110 111235799988888778899999999999999999976433 1122334
Q ss_pred EEEEecc----c----------------eeee-cCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 71 YLSVVEP----I----------------TQII-GGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 71 ~l~v~~~----p----------------~~~~-~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
.++|... | .++. .|..+.+.+|+.+.|.|.+...- ...+.|++
T Consensus 110 ~VTVSSast~~ps~~~l~~~~sgGSgsdivltQsP~slsvs~G~~vtlsC~~S~~~--~~~l~Wyq 173 (254)
T 4f9p_D 110 LVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQSPVTLSVTPGDSVSLSCRASQSI--SNNLHWYR 173 (254)
T ss_dssp EEEECC-------------------CCSCCEEEECSEEEECTTCEEEEEEEESSCC--TTCCEEEE
T ss_pred EEEEeCCCCcCCCCCCCccccccccccccccccCCceeEEcCCCcEeeEEEccCcc--cCCcEEEE
Confidence 5566421 1 1222 35567899999999999987642 34688986
No 265
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.70 E-value=1.2e-07 Score=58.15 Aligned_cols=77 Identities=16% Similarity=0.089 Sum_probs=50.3
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEAT 156 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (169)
+|.+...+....+.+|+.+.|.|.+.|. |.|.+.|++++..+.................+. +.....+|.+.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~--p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~------i~~v~~~D~G~ 76 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGK--PDPECEWYKNGVKIERSDRIYWYWPEDNVCELV------IRDVTGEDSAS 76 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEE--SCCEEEEEETTEECCCCSSEEEEEEETTEEEEE------ECSCCGGGCEE
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEe--CCCEEEEEECCEECCCCCCEEEEEcCCCEEEEE------ECCCCcCCCEE
Confidence 5666666778889999999999999986 456999999999887654322211111111222 33455566666
Q ss_pred EEEee
Q psy1826 157 YILAG 161 (169)
Q Consensus 157 ~~~~~ 161 (169)
|.+..
T Consensus 77 Y~C~a 81 (99)
T 1g1c_A 77 IMVKA 81 (99)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 266
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=98.70 E-value=7.6e-08 Score=67.63 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=61.7
Q ss_pred EEEEEEcCcee---EEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-------CCceEEEEEEE
Q psy1826 5 QISWVRHRDIH---LLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-------PPIGISMYLSV 74 (169)
Q Consensus 5 ~V~W~k~~~~~---~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-------~~~~~~~~l~v 74 (169)
.|.|+|+..+. .+-........+.|+.+......+.+.|.|.+++.+|+|.|.|.+.+. ........|.|
T Consensus 31 ~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~~~g~gt~L~V 110 (206)
T 1kgc_D 31 YIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCILPLAGGTSYGKLTFGQGTILTV 110 (206)
T ss_dssp CEEEEEECTTSCCEEEEEESSSSEECSSEEEEECTTSSEEEEEESSCCGGGCEEEEEECCCCSTTCCCCCCCCCCEEEEE
T ss_pred cEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEECCCCcccCccEEEEEecccCCCcccceECCCEEEEE
Confidence 69999975322 111111101125799876555567889999999999999999998752 12223446666
Q ss_pred eccceeeecCCcEEEc--CCCcEEEEEEeecCCCCCCee
Q psy1826 75 VEPITQIIGGPDMYIN--KGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 75 ~~~p~~~~~~~~~~v~--~g~~~~l~C~~~~~p~p~~~i 111 (169)
...+. ...+.+.+. ....+.|.|.+.++ .|.|.+
T Consensus 111 ~~~~~--~~~P~V~~~~~~~~~v~L~C~~~g~-~P~~~V 146 (206)
T 1kgc_D 111 HPNIQ--NPDPAVYQLRDSKSSDKSVCLFTDF-DSQTNV 146 (206)
T ss_dssp ECCCS--SCCCEEEECCCCTTCCCEEEEEESC-CTTCCC
T ss_pred eCCCC--CCCCeEEeecCCCCCeEEEEEeece-eccccc
Confidence 53211 001111111 12368999999996 455666
No 267
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=98.70 E-value=4.7e-08 Score=69.90 Aligned_cols=107 Identities=20% Similarity=0.256 Sum_probs=62.3
Q ss_pred cEEEEEEcCceeEEE----Ecc-eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEec
Q psy1826 4 AQISWVRHRDIHLLT----VSG-YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~----~~~-~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v~~ 76 (169)
..|.|+|+..+..+. ... .....+.|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .......|.|..
T Consensus 31 ~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~g~gt~L~V~~ 110 (229)
T 2q86_A 31 NHLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYFCVVGDRGSALFGSGTQLIVIP 110 (229)
T ss_dssp SCEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEESCGGGCEECCCEEEEEEC
T ss_pred cEEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEcccCcccCccEEEEEEecCcccccCCEEEEEEC
Confidence 469999975322111 111 1112357888765455578899999999999999999987531 122334666653
Q ss_pred cceeeecCCcEE--EcCCCcEEEEEEeecCCCCCCeeEE
Q psy1826 77 PITQIIGGPDMY--INKGSTMNLTCVIKHSPEPPPAIYW 113 (169)
Q Consensus 77 ~p~~~~~~~~~~--v~~g~~~~l~C~~~~~p~p~~~i~W 113 (169)
.+. ...+.+. ......+.|.|.+.++ .|.|.+.+
T Consensus 111 ~~~--~~~P~V~~~~~~~~~~tL~Cl~~gf-~P~p~V~~ 146 (229)
T 2q86_A 111 YIQ--NPEPAVYQLKDPRSQDSTLCLFTDF-DSQINVPK 146 (229)
T ss_dssp CCS--SCCCEEEEEECTTSTTCEEEEEEEE-CTTCCCCC
T ss_pred cCC--CCCCEEEEccCCCCCeEEEEEECCc-CcCCcccc
Confidence 211 0111111 1122378999999985 34556644
No 268
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=98.70 E-value=6.6e-08 Score=66.87 Aligned_cols=80 Identities=13% Similarity=0.206 Sum_probs=60.6
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceee-ecCCcEEEcCCCcEEEEEEeecCCCCCC--eeEEEEC
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQI-IGGPDMYINKGSTMNLTCVIKHSPEPPP--AIYWLHN 116 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~-~~~~~~~v~~g~~~~l~C~~~~~p~p~~--~i~W~~~ 116 (169)
..|.|.+|+. | |.|.|.+... ......++|.|..+|..+ +.+....+.+|+.+.|.|.+.+. .|.+ .|+|+++
T Consensus 50 ~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~-~P~~~l~i~w~kg 126 (185)
T 1iam_A 50 KVYELSNVQE-D-SQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGG-APRAQLTVVLLRG 126 (185)
T ss_dssp EEEEEEEECS-C-BCCEEEEECSSCEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECC-BCGGGEEEEEEET
T ss_pred eEEEEEecCc-C-CEEEEEEECCCCceEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCc-cCCCCcEEEEEeC
Confidence 3588999983 4 9999999776 456667888888776433 34444568899999999999996 2443 5899999
Q ss_pred CEEeecc
Q psy1826 117 TEVSQLN 123 (169)
Q Consensus 117 ~~~~~~~ 123 (169)
+..+...
T Consensus 127 ~~~l~~~ 133 (185)
T 1iam_A 127 EKELKRE 133 (185)
T ss_dssp TEEEEEE
T ss_pred CEEcccc
Confidence 9988653
No 269
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.69 E-value=1.6e-07 Score=57.59 Aligned_cols=78 Identities=18% Similarity=0.248 Sum_probs=51.0
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeecee
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEA 155 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (169)
.+|.+...+....+.+|+.+.|.|.+.+.| .|.+.|++++.++.................+. +.....+|.+
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~------i~~~~~~D~G 75 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEP--KPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLR------ILAAERGDAG 75 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEES--CCEEEEEETTEECCCBTTEEEEECGGGEEEEE------ESSCCGGGCE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcC--CCEEEEEECCEECCCCCCEEEEECCCCEEEEE------EccCCcCCCE
Confidence 356666667778899999999999999964 56999999999887654332222111111122 3345566666
Q ss_pred eEEEee
Q psy1826 156 TYILAG 161 (169)
Q Consensus 156 ~~~~~~ 161 (169)
.|.+..
T Consensus 76 ~Y~C~a 81 (99)
T 1u2h_A 76 FYTCKA 81 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666654
No 270
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.68 E-value=1.3e-07 Score=60.89 Aligned_cols=74 Identities=11% Similarity=0.355 Sum_probs=49.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
..|.|++.+. ............+.|+.+.. .......|.|.+++.+|+|.|.|.+.+.+.....+.|.|..+|.
T Consensus 31 ~~v~W~~~~~-~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~a~n~g~~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 31 SSLQWLTPSG-FTIFLNEYPVLKNSKYQLLH-HSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVIVLATMK 104 (124)
T ss_dssp CEEEEECTTS-CEEEETTEECSCSSCCEEEE-EETTEEEEEESSCCGGGCEEEEEEEESSSEEEEEEEEEEECC--
T ss_pred CEEEEECCCC-eEEEEeccccccCCcEEEEe-CCCCEEEEEECCCChHHCEEEEEEEEcCCCCcEEEEEEEEeCCC
Confidence 5789997654 23322222223456777543 22355699999999999999999998875556677788877764
No 271
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=6.1e-08 Score=59.75 Aligned_cols=62 Identities=31% Similarity=0.441 Sum_probs=44.8
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p 78 (169)
..|.|+|++. .+. ..+.|+. ...++ .|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|
T Consensus 38 p~v~W~~~~~--~~~------~~~~~~~-~~~~~----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 38 PVISWLKEGF--TFP------GRDPRAT-IQEQG----TLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESG 100 (100)
T ss_dssp CEEEEEESSS--EES------SSCSSCE-ECTTC----CEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEEESCC
T ss_pred CEEEEEECCE--ECC------CCCCCEE-EcCCC----EEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEEecCC
Confidence 3689999874 221 1234555 33344 7999999999999999999998 777777788777553
No 272
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.66 E-value=2.5e-07 Score=58.43 Aligned_cols=65 Identities=15% Similarity=0.276 Sum_probs=46.0
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 79 (169)
..|.|+|++.. +. .+.|+.+... .....|.|.+++.+|+|.|.|.+.|. +.....+.|.|...|.
T Consensus 37 p~i~W~k~~~~-~~--------~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 37 ITCTWMKFRKQ-IQ--------ESEHMKVENS--ENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp CEEEEEESSSB-CC--------CSSSEEEEEC--SSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEECSCS
T ss_pred CEEEEEECCEE-Cc--------CCCCEEEEEc--CCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEECCCC
Confidence 47899998741 21 1245553322 23458999999999999999999998 6666677888876543
No 273
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.65 E-value=1.7e-07 Score=59.21 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=48.9
Q ss_pred cEEEEEEcCcee---EEEEcc--eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc
Q psy1826 4 AQISWVRHRDIH---LLTVSG--YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP 77 (169)
Q Consensus 4 ~~V~W~k~~~~~---~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~ 77 (169)
..|.|+|+.... .+-... .....+.|+.+......+.+.|.|.+++.+|+|.|.|.+.+. ......+.|.|..+
T Consensus 32 ~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (113)
T 1zox_A 32 YKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKGGLDPMFKVTVNIGPV 111 (113)
T ss_dssp SCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCSSSCCEEEEEEEEECC
T ss_pred ceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHCEEEEEeeEcCCCCccEEEEEEEEcC
Confidence 359999975321 111110 001124688865444456789999999999999999999887 44556677777654
Q ss_pred c
Q psy1826 78 I 78 (169)
Q Consensus 78 p 78 (169)
|
T Consensus 112 p 112 (113)
T 1zox_A 112 P 112 (113)
T ss_dssp -
T ss_pred C
Confidence 4
No 274
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.64 E-value=3.5e-08 Score=62.87 Aligned_cols=76 Identities=28% Similarity=0.370 Sum_probs=51.1
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceee-
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQI- 81 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~- 81 (169)
..|.|+|++. .+. ..+.|+.. ..++ .|.|.+++.+|+|.|.|.+.|. +.....+.|.|..++...
T Consensus 38 p~i~W~k~g~--~~~------~~~~~~~~-~~~~----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~p~~ 104 (118)
T 2eo9_A 38 PTILWRKDGV--LVS------TQDSRIKQ-LENG----VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQ 104 (118)
T ss_dssp CEEEEEESSS--BCC------TTSTTEEE-EETT----EEEEESCCGGGCCCEEEEEECSSCEEEEECCEEEECCSCCCC
T ss_pred CEEEEEECCE--ECc------CCCCeEEE-ccCC----EEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEEEeCCCCcc
Confidence 4689999764 211 12356663 4455 8999999999999999999998 666667778887665322
Q ss_pred -ecCCcEEEcCC
Q psy1826 82 -IGGPDMYINKG 92 (169)
Q Consensus 82 -~~~~~~~v~~g 92 (169)
..+.+..+.+|
T Consensus 105 ~~~~~~~~~~~G 116 (118)
T 2eo9_A 105 PPRPTDPNLIPS 116 (118)
T ss_dssp CCCCCCCCCCCC
T ss_pred CCCCCCCccCCC
Confidence 22334444444
No 275
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.63 E-value=5.7e-08 Score=60.33 Aligned_cols=62 Identities=18% Similarity=0.292 Sum_probs=43.2
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
.|.|+|++. .+.. ..+.|+.+... .+...|.|.+++.+|+|.|.|.+.|. +.....+.|.|.
T Consensus 36 ~v~W~k~g~--~i~~-----~~~~~~~~~~~--~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 36 EVTWSCGGR--KIHS-----QEQGRFHIENT--DDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEETTE--ECCT-----TGGGTEEEEEC--SSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEECce--Eeee-----eccceeeeecc--cceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEEE
Confidence 689999873 2211 11235553322 24558999999999999999999998 666667777765
No 276
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.62 E-value=7e-08 Score=69.18 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCC---CCeeEEEEC
Q psy1826 48 PQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEP---PPAIYWLHN 116 (169)
Q Consensus 48 v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p---~~~i~W~~~ 116 (169)
++.+|+|.|.|.+... ......+.+..++.+...+..+.+.+|+.+.|.|.+.+.|.+ .+.+.|+++
T Consensus 11 v~~~dsg~Y~C~a~g~--~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 80 (254)
T 2c1o_A 11 VRPGTSVKLSCKASGY--SFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQ 80 (254)
T ss_dssp -----------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEE
T ss_pred ecCCccEEEEEcCchh--hhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEe
Confidence 7889999999999832 112223333335555555778899999999999999886411 379999973
No 277
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=98.62 E-value=1.7e-07 Score=65.37 Aligned_cols=80 Identities=9% Similarity=0.090 Sum_probs=59.5
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee-cCCcEEEcCCCcEEEEEEeecCCCCCCe--eEEEECC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII-GGPDMYINKGSTMNLTCVIKHSPEPPPA--IYWLHNT 117 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~-~~~~~~v~~g~~~~l~C~~~~~p~p~~~--i~W~~~~ 117 (169)
.+.|.+++ +|.+.|.|.+... ......++|.|..+|.... .+....+.+|+.+.|.|.+.+. .|... ++|++++
T Consensus 53 ~~~ls~vs-~d~~~~~C~~~c~~~~~~~~v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~-~P~~~L~i~wlkg~ 130 (196)
T 3bn3_B 53 ARQLVDIR-EPETQPVCFFRCARRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGA-GPRASLTLTLLRGA 130 (196)
T ss_dssp EEEEEEEC-SSEECCEEEEEETTEEEEEECEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTC-BCGGGEEEEEEETT
T ss_pred EEEEEEEc-cCCCceEEEEECCCCceEEEEEEEEecCCCcCEEccCCccccCCCcEEEEEEeCCc-cCCCCcEEEEEeCC
Confidence 47889999 8888899998775 4566778888887764332 2322337799999999999986 35444 8999999
Q ss_pred EEeecc
Q psy1826 118 EVSQLN 123 (169)
Q Consensus 118 ~~~~~~ 123 (169)
..+...
T Consensus 131 ~~l~~~ 136 (196)
T 3bn3_B 131 QELIRR 136 (196)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 987543
No 278
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.62 E-value=1.3e-07 Score=59.01 Aligned_cols=62 Identities=21% Similarity=0.441 Sum_probs=41.1
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccce
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPIT 79 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 79 (169)
.|.|+|++.. .. ...++....... .|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|.
T Consensus 41 ~i~W~~~~~~-~~--------~~~~~~~~~~~~----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 41 QIMWFKDNET-LV--------EDSGIVLKDGNR----NLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp CEEEEESSSB-CC--------CBTTEEEETTTT----EEEECSCCGGGCEEEEEEEC----CEEEEEEEEEEC---
T ss_pred eEEEEECCeE-cc--------cCCCeEEeCCCc----EEEEeecCcccCEEEEEEEEeCCCceEEEEEEEEeCCCc
Confidence 5899998742 21 123444333334 8999999999999999999998 7777778888876653
No 279
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.61 E-value=2.4e-07 Score=58.91 Aligned_cols=62 Identities=23% Similarity=0.310 Sum_probs=44.0
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccc
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPI 78 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p 78 (169)
.|.|+|++. .+. ..|+.+... .....|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|
T Consensus 55 ~i~W~k~g~--~l~--------~~~~~~~~~--~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 55 QVVWTKGGA--PLD--------TSRVHVRTS--DFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEEETTE--ECC--------CSSCEEEEC--SSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEEECCE--ECC--------CCcEEEEEC--CCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEEcCC
Confidence 689999873 221 134443222 23446999999999999999999998 766677788777654
No 280
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.60 E-value=1e-07 Score=57.36 Aligned_cols=60 Identities=22% Similarity=0.387 Sum_probs=40.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEecc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEP 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~ 77 (169)
..|.|+|++. .+. .+.++.+... + +...|.|.+++.+|+|.|.|.+.+ ....+.|.|..|
T Consensus 25 p~v~W~k~g~-~l~--------~~~~~~~~~~-~-~~~~L~I~~~~~~D~G~Y~C~a~n---~~~~a~l~V~eP 84 (84)
T 2lu7_A 25 GPVRWYKDGE-RLA--------SQGRVQLEQA-G-ARQVLRVQGARSGDAGEYLCDAPQ---DSRIFLVSVEEP 84 (84)
T ss_dssp TTCEEEETTE-ECC--------CCSSEEEEEC-S-SCEEEEESSCSSTTCEEEEEECTT---TCEEEEEEECCC
T ss_pred cEEEEEECCE-Ecc--------ccccEEEeec-C-CeEEEEecCCCCcccEEEEEEECC---EEEEEEEEEECC
Confidence 3589999874 221 2345554332 2 345799999999999999998855 345566776543
No 281
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=6.4e-08 Score=60.78 Aligned_cols=66 Identities=14% Similarity=0.227 Sum_probs=46.3
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p 78 (169)
..|.|+|++. .+. ....|+.+... ..+.+.|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|
T Consensus 38 p~v~W~k~g~--~~~------~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 38 PKIYWFKDGK--QIS------PKSDHYTIQRD-LDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp CEEEEECSSC--BCC------TTCSSEEEEEC-TTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCEEEECCS
T ss_pred CEEEEEECCE--ECC------CCCCeEEEEEC-CCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEECCC
Confidence 4789998764 211 11245654332 234567999999999999999999998 766666777777654
No 282
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=98.60 E-value=6.8e-08 Score=67.24 Aligned_cols=105 Identities=21% Similarity=0.251 Sum_probs=59.6
Q ss_pred cEEEEEEcCceeE---EEEcce--eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC----C--CceEEEEE
Q psy1826 4 AQISWVRHRDIHL---LTVSGY--TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT----P--PIGISMYL 72 (169)
Q Consensus 4 ~~V~W~k~~~~~~---~~~~~~--~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~----~--~~~~~~~l 72 (169)
..|.|+|+..+.. +-.... ....+.|+.+......+.+.|.|.+++.+|+|.|.|.+.+. . .......|
T Consensus 31 ~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~~g~gt~L 110 (194)
T 1lp9_E 31 PFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLSDSALYYCALFLASSSFSKLVFGQGTSL 110 (194)
T ss_dssp CCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGGGCEEEEEEEEECSSSSCEEEECCCEEE
T ss_pred ceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCcccCeeEEEEEecccCCcceeeeccCceE
Confidence 4689999753221 111110 11235788864333335568999999999999999999762 1 11123466
Q ss_pred EEeccceeeecCCcEE--EcCCCcEEEEEEeecCCCCCCee
Q psy1826 73 SVVEPITQIIGGPDMY--INKGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 73 ~v~~~p~~~~~~~~~~--v~~g~~~~l~C~~~~~p~p~~~i 111 (169)
.|...+. ...+.+. ......+.|.|.+.+. .|.|.+
T Consensus 111 ~V~~~~~--~~~P~V~~~~~~~~~~tL~Cl~~gf-~P~~~V 148 (194)
T 1lp9_E 111 SVVPNIQ--NPEPAVYQLKDPRSQDSTLCLFTDF-DSQINV 148 (194)
T ss_dssp EEECCCS--SCCCEEEEEECTTSSSCEEEEEESC-CTTSCC
T ss_pred EecCcCC--CCCCeeEecCCCCCCcEEEEEeecc-cCCccc
Confidence 6653211 0111111 1122368999999995 355576
No 283
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.59 E-value=2.6e-07 Score=61.66 Aligned_cols=70 Identities=14% Similarity=0.222 Sum_probs=46.6
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++. .+ ..+.|+.+... ..+...|.|.+++..|+|.|.|.+.|. +.....+.|.|..+|....
T Consensus 71 p~v~W~k~g~--~~-------~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~ 140 (154)
T 1fhg_A 71 PEVMWFKDDN--PV-------KESRHFQIDYD-EEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMGKEGE 140 (154)
T ss_dssp CEEEEEETTE--EC-------CCSSSEEEEEC-TTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-----
T ss_pred CEEEEEECCE--EC-------CCCCcEEEEEC-CCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEEeCcCcCCC
Confidence 3689999873 21 12345554322 224568999999999999999999998 6667778888887776444
Q ss_pred c
Q psy1826 83 G 83 (169)
Q Consensus 83 ~ 83 (169)
.
T Consensus 141 ~ 141 (154)
T 1fhg_A 141 G 141 (154)
T ss_dssp -
T ss_pred C
Confidence 3
No 284
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.59 E-value=6.3e-07 Score=55.72 Aligned_cols=48 Identities=19% Similarity=0.274 Sum_probs=40.0
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+|.+...+....+.+|+.+.|.|.+.+.|.|++.+.|++++..+...
T Consensus 9 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~ 56 (112)
T 3so5_A 9 PXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDA 56 (112)
T ss_dssp CSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTC
T ss_pred CCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccc
Confidence 466666667778999999999999999876667899999999887654
No 285
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.59 E-value=1.7e-07 Score=66.14 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=60.8
Q ss_pred EEEEEEcCcee---EEEE--cceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC------CceEEEEEE
Q psy1826 5 QISWVRHRDIH---LLTV--SGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP------PIGISMYLS 73 (169)
Q Consensus 5 ~V~W~k~~~~~---~~~~--~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~------~~~~~~~l~ 73 (169)
.|.|+|+..+. .+-. .......+.|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .......|.
T Consensus 34 ~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~fg~gt~L~ 113 (210)
T 2eys_A 34 NLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVSDRGSTLGRLYFGRGTQLT 113 (210)
T ss_dssp EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEESCSSTTCCEEECCCEEEE
T ss_pred eEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEEccCCCcccceECCCEEEE
Confidence 69999975321 1211 101111257998765555577899999999999999999998721 112234666
Q ss_pred Eecc-----ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCee
Q psy1826 74 VVEP-----ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 74 v~~~-----p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i 111 (169)
|... |.+....+ ....+.|.|.+.++. |++.+
T Consensus 114 V~~~~~~~~P~V~~~~~-----~~~~~tl~Cl~~gf~-P~~~v 150 (210)
T 2eys_A 114 VWPDIQNPDPAVYQLRD-----SKSSDKSVCLFTDFD-SQTNV 150 (210)
T ss_dssp EECCCSSCCCEEEEECC-----CSSSSCEEEEEESCC-TTCCC
T ss_pred EECCCCCCCCeEEecCC-----CCCCceEEEEccccc-CCcEe
Confidence 6532 22111111 122678999999984 54554
No 286
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.58 E-value=1.2e-07 Score=59.05 Aligned_cols=63 Identities=19% Similarity=0.381 Sum_probs=43.1
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccc
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPI 78 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p 78 (169)
.|.|+|++. .+. ...|+.+... .....|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|
T Consensus 44 ~i~W~~~~~-~~~--------~~~~~~~~~~--~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 44 VVVWEKGGQ-QLA--------ASERLSFPAD--GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEETTE-ECC--------CCSSEECCEE--TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred EEEEEECCe-ECC--------CCCcEEEEeC--CCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEEEcCC
Confidence 689999763 121 2245543222 23457999999999999999999997 666667777777654
No 287
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.58 E-value=3.3e-07 Score=56.13 Aligned_cols=62 Identities=13% Similarity=0.140 Sum_probs=42.0
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
..|.|+|++. .+. ...++...... .+...|.|.+++.+|+|.|.|.+.|. +.....+.|.|.
T Consensus 35 p~v~W~k~g~-~~~--------~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 35 PECEWYKNGV-KIE--------RSDRIYWYWPE-DNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQ 97 (99)
T ss_dssp CEEEEEETTE-ECC--------CCSSEEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEECCE-ECC--------CCCCEEEEEcC-CCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEEEe
Confidence 4689999874 111 12344322211 24558999999999999999999998 666666666665
No 288
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.58 E-value=1.1e-07 Score=61.71 Aligned_cols=39 Identities=13% Similarity=0.194 Sum_probs=33.2
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccce
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPIT 79 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 79 (169)
..|.|.++...|+|.|+|.|.|. +.....+.|.|...|.
T Consensus 63 ~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l~v~~~P~ 102 (126)
T 1he7_A 63 GCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPF 102 (126)
T ss_dssp EEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCCSCTT
T ss_pred eEEEECcCCCCCCEEEEEEEEECCCeEEEEEEEEEEcCCC
Confidence 47999999999999999999998 7777777777776664
No 289
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.58 E-value=4.7e-07 Score=57.77 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=45.7
Q ss_pred cEEEEEEcCceeEEEEc--cee-e--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEEec
Q psy1826 4 AQISWVRHRDIHLLTVS--GYT-Y--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~--~~~-~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v~~ 76 (169)
..|.|+|++. .+.... ... + .-..|+.+ ..+. +|.|.+++.+|+|.|.|.+.+. +.....+.|.|.+
T Consensus 35 ~~v~W~k~~~-~i~~~~~~~~~~~~~~~~~R~~~-~~~~----sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V~~ 108 (117)
T 3q0h_A 35 TQVNWEQQDQ-LLAICNADLGWHISPSFKDRVAP-GPGL----GLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEVLE 108 (117)
T ss_dssp EEEEEEETTE-EEEEEETTTEEECCGGGTTTEEE-CSTT----CEEECSCCGGGCEEEEEEEEEETTCCEEEEEEEEEEC
T ss_pred EEEEEEeCCE-EEEEEECCCCceeCccccCcEEe-CCce----EEEEeeCChhhCEEEEEEEEECCCCCeEEEEEEEEEc
Confidence 4689999763 221110 000 0 11357773 3333 8999999999999999997653 6667788999998
Q ss_pred ccee
Q psy1826 77 PITQ 80 (169)
Q Consensus 77 ~p~~ 80 (169)
||..
T Consensus 109 pp~~ 112 (117)
T 3q0h_A 109 SSVA 112 (117)
T ss_dssp C---
T ss_pred cCcc
Confidence 8763
No 290
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=98.58 E-value=3e-07 Score=64.31 Aligned_cols=105 Identities=20% Similarity=0.229 Sum_probs=59.0
Q ss_pred cEEEEEEcCcee---EE-EEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC---C--CceEEEEEEE
Q psy1826 4 AQISWVRHRDIH---LL-TVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT---P--PIGISMYLSV 74 (169)
Q Consensus 4 ~~V~W~k~~~~~---~~-~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~---~--~~~~~~~l~v 74 (169)
..|.|+|+..+. .+ .........+.|+.+......+.+.|.|.+++.+|+|.|.|.+... . .......|.|
T Consensus 29 ~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~~fg~gt~L~V 108 (200)
T 2nw2_A 29 NGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDSASYLCAVQASGGSYIPTFGRGTSLIV 108 (200)
T ss_dssp CCEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC---CCCCCEECCCEEEEE
T ss_pred ceEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCcccCCcEEEEEEcCCcceeeeeCCCEEEEE
Confidence 358999975321 11 1111111115799876555557889999999999999999998751 1 1223346666
Q ss_pred eccceeeecCCcEE--EcCCCcEEEEEEeecCCCCCCee
Q psy1826 75 VEPITQIIGGPDMY--INKGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 75 ~~~p~~~~~~~~~~--v~~g~~~~l~C~~~~~p~p~~~i 111 (169)
...+. ...+.+. ......+.|.|.+.+.. |.+.+
T Consensus 109 ~~~~~--~~~P~V~~~~~~~~~~tl~Cl~~gf~-P~~~v 144 (200)
T 2nw2_A 109 HPYIQ--NPDPAVYQLRDSKSSDKSVCLFTDFD-SQTNV 144 (200)
T ss_dssp ECCCS--SCCCEEEEEEECC--CCEEEEEESCC-TTCCC
T ss_pred ecCcc--cCCCeEEEcCCCCCCceEEEEeeccc-CCcEe
Confidence 54210 0111111 11222688999999974 54444
No 291
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.56 E-value=5.2e-07 Score=55.21 Aligned_cols=75 Identities=8% Similarity=-0.053 Sum_probs=50.0
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEAT 156 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (169)
+|.+...+.+..+.+|+.+.|.|.+.+. +|.+.|++||.++..+....... ......+. +.....+|.+.
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~~---~~~v~W~k~g~~i~~~~~~~i~~-~g~~~~L~------I~~v~~~D~G~ 74 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSEP---DVHGQWKLKGQPLAASPDCEIIE-DGKKHILI------LHNCQLGMTGE 74 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESSS---SCCCEEEETTEECCCBTTEEEEE-ETTEEEEE------ECSCCGGGCEE
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECCC---CCeEEEEECCEECcCCCCEEEEE-ECCEEEEE------ECCCChhhCEE
Confidence 4555666678899999999999999762 36899999999987654332211 11111222 44566777877
Q ss_pred EEEee
Q psy1826 157 YILAG 161 (169)
Q Consensus 157 ~~~~~ 161 (169)
|.+..
T Consensus 75 Y~C~a 79 (93)
T 1waa_A 75 VSFQA 79 (93)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77754
No 292
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.55 E-value=4.6e-08 Score=62.13 Aligned_cols=46 Identities=24% Similarity=0.473 Sum_probs=38.4
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+|.+...+....+.+|+.+.|.|.+.|. |.|.+.|++++.++...
T Consensus 8 ~pP~i~~~p~~~~v~~G~~v~L~C~~~g~--P~p~v~W~k~~~~~~~~ 53 (117)
T 2v9t_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGR--PTPTIEWYKGGERVETD 53 (117)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEE--SCCEEEEEETTEECCCT
T ss_pred CCCeeEcCCCCEEEcCCCcEEEEEECCcc--CCCeEEEEECCEecccc
Confidence 46666666778889999999999999996 45699999999988754
No 293
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=2.5e-07 Score=58.22 Aligned_cols=66 Identities=23% Similarity=0.388 Sum_probs=45.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeeec
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQIIG 83 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~ 83 (169)
..|.|+|++. .+. ...|+.+.... ....|.|.+++.+|+|.|.|.+.| ....+.|.|..+|..+..
T Consensus 42 ~~v~W~k~g~-~~~--------~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~n---~~~~~~l~V~~~p~~~~~ 107 (113)
T 2cpc_A 42 AEVRWTKDGE-EVV--------ESPALLLQKED--TVRRLVLPAVQLEDSGEYLCEIDD---ESASFTVTVTEPPVRIIY 107 (113)
T ss_dssp CCCEEEETTE-ECC--------CBTTBEEEECS--SEEEEEESSCCTTTCEEEEEESSS---CEEEEEEEEECCCCCCCC
T ss_pred CeEEEEECCE-ECc--------cCCCEEEEECC--CEEEEEECCCCcccCEEEEEEEec---CcEEEEEEEecCCchhcc
Confidence 4689999873 221 12455533221 234899999999999999999988 556778888888765443
No 294
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.55 E-value=4.7e-07 Score=59.24 Aligned_cols=77 Identities=16% Similarity=0.191 Sum_probs=47.9
Q ss_pred CcEEEEEEcCceeEE-EEccee-e------cCCCCeEEEecC-CCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEE
Q psy1826 3 LAQISWVRHRDIHLL-TVSGYT-Y------TSDQRFSCIHKP-QNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYL 72 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~-~~~~~~-~------~~~~r~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l 72 (169)
...|.|+|++..... ...... . .-..|+.+.... ..+.+.|.|.+++.+|+|.|.|.+.+. +.....+.|
T Consensus 38 ~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L 117 (139)
T 1pko_A 38 GMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVEL 117 (139)
T ss_dssp TSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCHHHCEEEEEEEEcCCCceEEEEEE
Confidence 368999997642111 111100 0 113577754321 234678999999999999999999987 545566788
Q ss_pred EEeccce
Q psy1826 73 SVVEPIT 79 (169)
Q Consensus 73 ~v~~~p~ 79 (169)
.|..|+.
T Consensus 118 ~V~~P~~ 124 (139)
T 1pko_A 118 KVEDPFY 124 (139)
T ss_dssp EEECTTT
T ss_pred EEecCcC
Confidence 8875543
No 295
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.55 E-value=1.8e-07 Score=57.81 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=38.9
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+|.+...+....+.+|+.+.|.|.+.+. |.|.+.|++++.++....
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~--p~p~i~W~k~~~~~~~~~ 53 (103)
T 3qp3_A 7 HAPRITLRMRSHRVPCGQNTRFILNVQSK--PTAEVKWYHNGVELQESS 53 (103)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEE--SCCEEEEEETTEECCCCS
T ss_pred CCCEEEeCCcceEEeCCCeEEEEEEEEec--CCCEEEEEECCEECCCCC
Confidence 45666666778899999999999999996 456999999999887654
No 296
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.55 E-value=6.1e-07 Score=59.17 Aligned_cols=74 Identities=16% Similarity=0.270 Sum_probs=50.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
..|.|++.+.. .+.........+.|+...... .....|.|.+++.+|+|.|.|.+.+.+.....+.|.|..+|.
T Consensus 68 ~~i~W~~~~~~-~i~~~~~~~~~~~r~~~~~~~-~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~L~V~~~P~ 141 (145)
T 1z9m_A 68 SSLQWSNPAQQ-TLYFGEKRALRDNRIQLVTST-PHELSISISNVALADEGEYTCSIFTMPVRTAKSLVTVLGIPQ 141 (145)
T ss_dssp CCEEEECTTCC-EEEETTEECSCCTTEEEEEEC-SSEEEEEECSCCGGGCEEEEEEECSSSCEEEEEEEEEECCCC
T ss_pred cEEEEECCCCc-EEEECCceecccCCEEEecCC-CCeEEEEECCCChhhCEEEEEEEEcCCCceEEEEEEEEeCCC
Confidence 56899965432 222233333445788754432 356689999999999999999998875556677788876653
No 297
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.54 E-value=5.6e-08 Score=71.92 Aligned_cols=81 Identities=7% Similarity=0.072 Sum_probs=22.1
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CC--------ceEEEEEEEeccceeeec-CCcEEEcCCCcEEEEEEeecCCCCC--C
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PP--------IGISMYLSVVEPITQIIG-GPDMYINKGSTMNLTCVIKHSPEPP--P 109 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~--------~~~~~~l~v~~~p~~~~~-~~~~~v~~g~~~~l~C~~~~~p~p~--~ 109 (169)
.|.+.....+|.+.|.|+|.+. +. .+....|.|..+|..... .....+.+|+.+.|.|.+.|.| |+ .
T Consensus 143 ~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~-P~~~~ 221 (291)
T 1mq8_A 143 TTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLF-PVSEA 221 (291)
T ss_dssp EEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC--------------------------------------
T ss_pred EEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCC-CCccc
Confidence 5666666777777999999976 21 233346666666432111 1123678999999999999974 33 4
Q ss_pred eeEEEECCEEeecc
Q psy1826 110 AIYWLHNTEVSQLN 123 (169)
Q Consensus 110 ~i~W~~~~~~~~~~ 123 (169)
.+.|.++|..+...
T Consensus 222 ~v~w~~~g~~l~~~ 235 (291)
T 1mq8_A 222 QVHLALGDQRLNPT 235 (291)
T ss_dssp --------------
T ss_pred EEEEEECCEecCce
Confidence 79999999888753
No 298
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.54 E-value=3.3e-07 Score=61.15 Aligned_cols=82 Identities=16% Similarity=0.140 Sum_probs=53.2
Q ss_pred EEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEee
Q psy1826 72 LSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTW 151 (169)
Q Consensus 72 l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (169)
+.+..+|.+...+....+.+|+.+.|.|.+.+.| .|.+.|++++..+.................+. +.....
T Consensus 36 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P--~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~------I~~v~~ 107 (154)
T 1fhg_A 36 EKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYP--DPEVMWFKDDNPVKESRHFQIDYDEEGNCSLT------ISEVCG 107 (154)
T ss_dssp CCCCEEEEEEECCCCEEEETTSCEEEEEEEEEES--CCEEEEEETTEECCCSSSEEEEECTTCEEEEE------ESSCCG
T ss_pred ccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEec--CCEEEEEECCEECCCCCcEEEEECCCCeEEEE------ECCCCh
Confidence 3444577777777788999999999999999964 56999999999886543322221111111222 334555
Q ss_pred eceeeEEEee
Q psy1826 152 KLEATYILAG 161 (169)
Q Consensus 152 ~~~~~~~~~~ 161 (169)
+|.+.|.+..
T Consensus 108 ~D~G~Y~C~a 117 (154)
T 1fhg_A 108 DDDAKYTCKA 117 (154)
T ss_dssp GGCEEEEEEE
T ss_pred hcCEEEEEEE
Confidence 6666666654
No 299
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.54 E-value=6.1e-07 Score=55.40 Aligned_cols=63 Identities=19% Similarity=0.226 Sum_probs=44.0
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~ 77 (169)
-.|.|+|++. .+. ...|+..... .....|.|.++..+|+|.|.|.+.|. +.....+.|.|...
T Consensus 38 p~i~W~k~~~-~~~--------~~~~~~~~~~--~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 38 AEVKWYHNGV-ELQ--------ESSKIHYTNT--SGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp CEEEEEETTE-ECC--------CCSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CEEEEEECCE-ECC--------CCCCEEEEEC--CCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEEECC
Confidence 3689999873 121 2245553322 23457999999999999999999998 66666777777643
No 300
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.53 E-value=4.4e-07 Score=55.36 Aligned_cols=60 Identities=30% Similarity=0.425 Sum_probs=43.0
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p 78 (169)
-.|.|+|++. .+. .+.|+.. ... .|.|.+++.+|+|.|.|.+.|. +.....+.|.|..++
T Consensus 29 p~v~W~k~g~--~~~-------~~~~~~~--~~~----~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 89 (95)
T 4hwu_A 29 AVISWTKDGV--HLG-------PNNRTVL--IGE----YLQIKGATPRDSGLYACTAARTVDSETWIFMVNVTDAA 89 (95)
T ss_dssp CEEEEEETTE--EEC-------CCSSEEE--ETT----EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCC-
T ss_pred CEEEEEECCE--ECC-------CCceEEE--eCC----EEEECcCCcccCEEEEEEEccCCCcEEEEEEEEEeCCc
Confidence 4789999873 221 2245553 234 8999999999999999999998 666666777776554
No 301
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.53 E-value=1.8e-07 Score=57.35 Aligned_cols=59 Identities=19% Similarity=0.150 Sum_probs=40.1
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEec
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~ 76 (169)
..|.|+|++. .+. .+.|+.+.... ....|.|.+++.+|+|.|.|.+.|. ...+.|.|..
T Consensus 34 ~~v~W~k~g~-~i~--------~~~~~~i~~~g--~~~~L~I~~v~~~D~G~Y~C~a~n~---~~sa~L~V~~ 92 (93)
T 1waa_A 34 VHGQWKLKGQ-PLA--------ASPDCEIIEDG--KKHILILHNCQLGMTGEVSFQAANT---KSAANLKVKE 92 (93)
T ss_dssp CCCEEEETTE-ECC--------CBTTEEEEEET--TEEEEEECSCCGGGCEEEEEEETTE---EEEEEEEEEC
T ss_pred CeEEEEECCE-ECc--------CCCCEEEEEEC--CEEEEEECCCChhhCEEEEEEECCC---cEEEEEEEEc
Confidence 4689999874 221 22466543321 3458999999999999999999873 3456666653
No 302
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.53 E-value=2.9e-07 Score=56.49 Aligned_cols=38 Identities=18% Similarity=0.319 Sum_probs=31.4
Q ss_pred CeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec
Q psy1826 39 EDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE 76 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~ 76 (169)
+...|.|.+++.+|+|.|.|.+.|. +.....+.|.|..
T Consensus 60 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 60 GLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLA 98 (100)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEEe
Confidence 4458999999999999999999998 6666677777654
No 303
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.51 E-value=2.9e-07 Score=58.73 Aligned_cols=43 Identities=28% Similarity=0.381 Sum_probs=34.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGG 84 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~ 84 (169)
.|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|.+...+
T Consensus 75 ~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V~~~p~i~~~p 118 (122)
T 3s35_X 75 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGS 118 (122)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEECC----
T ss_pred EEEECCCCcccCEEEEEEEccCCCceEEEEEEEEeccCeEEeec
Confidence 7999999999999999999998 767778889998887755443
No 304
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.51 E-value=1.3e-06 Score=60.58 Aligned_cols=80 Identities=13% Similarity=0.285 Sum_probs=59.8
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeecC-CcEEEcCCCcEEEEEEeecC-CCCCCeeEEEECC
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIGG-PDMYINKGSTMNLTCVIKHS-PEPPPAIYWLHNT 117 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~-~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~ 117 (169)
..|.|.+|+ |+|.|.|.+... ......++|+|..+|...... ....+.+|+.+.|.|.+.+. |.+...+.|++++
T Consensus 52 ~~l~l~~vs--~~g~~~C~~~c~~~~~~~~~~itVy~~P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~ 129 (192)
T 1zxq_A 52 KHYLVSNIS--HDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGN 129 (192)
T ss_dssp EEEEEEEEC--SCEEEEEEEEETTEEEEEEEEEEECBCCCCCEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETT
T ss_pred EEEEEeccc--cCCeeEEEEECCCcceEEEEEEEEEeCCCCceEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCC
Confidence 368999999 789999999876 455678889998877433222 12467899999999999874 3333358999999
Q ss_pred EEeec
Q psy1826 118 EVSQL 122 (169)
Q Consensus 118 ~~~~~ 122 (169)
..+..
T Consensus 130 ~~l~~ 134 (192)
T 1zxq_A 130 ETLHY 134 (192)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 88754
No 305
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.51 E-value=1.5e-07 Score=60.88 Aligned_cols=72 Identities=17% Similarity=0.207 Sum_probs=43.9
Q ss_pred CcEEEEEEcCceeE-EEEcc-eee------cCCCCeEEEecC-CCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEE
Q psy1826 3 LAQISWVRHRDIHL-LTVSG-YTY------TSDQRFSCIHKP-QNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYL 72 (169)
Q Consensus 3 ~~~V~W~k~~~~~~-~~~~~-~~~------~~~~r~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l 72 (169)
++.|.|+|.+.... ..... ... .-..|+.+.... ..++++|.|.+++.+|+|.|.|.+.+. +.....+.|
T Consensus 37 ~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~g~~~~~v~L 116 (125)
T 4gos_A 37 DIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEY 116 (125)
T ss_dssp GCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChHHCEEEEEEEEeCCCeEEEEEEE
Confidence 46799999763221 11111 000 113566643221 124568999999999999999999886 555555565
Q ss_pred EE
Q psy1826 73 SV 74 (169)
Q Consensus 73 ~v 74 (169)
.|
T Consensus 117 kV 118 (125)
T 4gos_A 117 KT 118 (125)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 306
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.51 E-value=3.1e-07 Score=57.91 Aligned_cols=74 Identities=20% Similarity=0.412 Sum_probs=44.7
Q ss_pred EEEEEEcCceeEEEE---cc-eeecCCCCeEEEecC---CCCeEEEEEcCCCCCCCeEEEEEEEc-C-CCceEEEEEEEe
Q psy1826 5 QISWVRHRDIHLLTV---SG-YTYTSDQRFSCIHKP---QNEDWTLQIKYPQKRDSGIYECQVST-T-PPIGISMYLSVV 75 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~---~~-~~~~~~~r~~~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~~~~-~-~~~~~~~~l~v~ 75 (169)
.|.|+|++....... .. ..+....|+.+.... +.+.++|.|.+++.+|+|.|.|.+.+ . +.....+.|.|.
T Consensus 36 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~ 115 (118)
T 3udw_C 36 QLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVL 115 (118)
T ss_dssp EEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChHHCeEEEEEEEECCCCCccceEEEEEE
Confidence 699999753211110 00 011124566643221 01155899999999999999999988 4 456667788887
Q ss_pred ccc
Q psy1826 76 EPI 78 (169)
Q Consensus 76 ~~p 78 (169)
++|
T Consensus 116 ~~P 118 (118)
T 3udw_C 116 AKP 118 (118)
T ss_dssp C--
T ss_pred eCC
Confidence 664
No 307
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=5.4e-08 Score=61.77 Aligned_cols=82 Identities=16% Similarity=0.150 Sum_probs=52.3
Q ss_pred EEEEeccc-eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEE
Q psy1826 71 YLSVVEPI-TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVEL 149 (169)
Q Consensus 71 ~l~v~~~p-~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (169)
.|.|..+| .+...+.+..+.+|+.+.|.|.+.+. |.|.+.|++++.++..+..............+. +...
T Consensus 6 ~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~--p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~------I~~v 77 (115)
T 2cr6_A 6 SGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPA--NYEPVHWFLDKTPLHANELNEIDAQPGGYHVLT------LRQL 77 (115)
T ss_dssp CCCCCSSCCEEEECCCEEEEETTSCEECCCEEEST--TCCSCEEEESSCEECCSSSCCBCCBTTTBCCBE------ECSC
T ss_pred EEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCC--CCCccEEEECCEECCCCCcEEEEEcCCCEEEEE------EcCC
Confidence 45555555 44555667899999999999999986 456999999999887654322211111111222 3345
Q ss_pred eeeceeeEEEe
Q psy1826 150 TWKLEATYILA 160 (169)
Q Consensus 150 ~~~~~~~~~~~ 160 (169)
..+|.+.|.+.
T Consensus 78 ~~~D~G~Y~C~ 88 (115)
T 2cr6_A 78 ALKDSGTIYFE 88 (115)
T ss_dssp CTTTCEEEEEE
T ss_pred ChhhCEEEEEE
Confidence 56676666664
No 308
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.50 E-value=5.1e-07 Score=57.61 Aligned_cols=53 Identities=21% Similarity=0.342 Sum_probs=34.4
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC--ceEEEEEEEeccce
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP--IGISMYLSVVEPIT 79 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~--~~~~~~l~v~~~p~ 79 (169)
..|+.+......++++|.|.+++.+|+|.|.|.+.+. +. ....+.|.|..+|.
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p~ 122 (124)
T 1neu_A 67 KERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122 (124)
T ss_dssp TTCEEECCBGGGTBCCEEECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC---
T ss_pred cCcEEEecCCcCCeEEEEEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCCC
Confidence 4577743221123458999999999999999999886 32 35567777776553
No 309
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.50 E-value=2.2e-07 Score=57.85 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=32.5
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccce
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPIT 79 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 79 (169)
.|.|.++..+|+|.|.|.|.|. +.....+.|.|..+|.
T Consensus 63 ~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 63 CLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPG 101 (103)
T ss_dssp EEEEESCCGGGCEEEEEEEECSSCEEEEEEEECCSCCCC
T ss_pred EEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEECCCCC
Confidence 5999999999999999999998 7777777877766553
No 310
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.50 E-value=8.6e-07 Score=54.18 Aligned_cols=61 Identities=20% Similarity=0.447 Sum_probs=42.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
..|.|+|++. .+ ..+.|+.+... .....|.|.++..+|+|.|.|.+.|. +.....+.|.|.
T Consensus 36 p~v~W~~~g~--~~-------~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 36 PTAIWTKDGK--AI-------TQGGKYKLSED--KGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp CEEEEEETTE--EC-------CSSSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEECCE--EC-------cCCCCEEEEEe--CCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEEE
Confidence 3689999763 21 12356654332 24457999999999999999999997 656666666664
No 311
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.49 E-value=7.4e-07 Score=54.47 Aligned_cols=45 Identities=18% Similarity=0.401 Sum_probs=36.3
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
+|.+...+..+.+.+|+.+.|.|.+.+.| .|.+.|++++..+...
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~~~~~~~ 49 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEP--TPEVTWSCGGRKIHSQ 49 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEES--CCEEEEEETTEECCTT
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcC--CCceEEEECCEEeecC
Confidence 45555556678899999999999999964 5699999999988643
No 312
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.48 E-value=9.1e-07 Score=56.03 Aligned_cols=45 Identities=20% Similarity=0.152 Sum_probs=35.3
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C-CceEEEEEEEec
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P-PIGISMYLSVVE 76 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~-~~~~~~~l~v~~ 76 (169)
.+|.. +..++ +|.|.+++.+|+|.|+|++.+. + .....++|.|..
T Consensus 63 ~gR~~-~~~ng----SL~I~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 63 SGREI-IYPNA----SLLIQNIIQNDAGFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp CSCEE-ECTTS----CEEECSCCGGGCEEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred CCcEE-EecCC----cEEEccCcccCCeEEEEEEEeCCCcEEEEEEEEEEec
Confidence 46888 45667 9999999999999999999987 4 345566776654
No 313
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.48 E-value=1.6e-06 Score=55.05 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=51.9
Q ss_pred eccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccccccee-ecceeeEEEEEEEEeeEEEEeeec
Q psy1826 75 VEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRES-ESSSFVKRLVVLLSVSIVELTWKL 153 (169)
Q Consensus 75 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 153 (169)
..+|.++..+.++.+.+|+.+.|.|.+.|.| .|.+.|++++..+..+..+... ........+. +.....+|
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p--~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~------I~~v~~~D 84 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIP--PPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLL------IKDVNKKD 84 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBS--CCEEEEEETTEECCCCBTTEEEEECTTCEEEEE------EEEECGGG
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccC--CCEEEEEECCEECcCCCCeEEEEeCCCCeEEEE------ECCCCccc
Confidence 3467777778889999999999999999964 5699999999988754322211 1111111222 33455667
Q ss_pred eeeEEEee
Q psy1826 154 EATYILAG 161 (169)
Q Consensus 154 ~~~~~~~~ 161 (169)
.+.|.+..
T Consensus 85 ~G~Y~C~a 92 (116)
T 2kkq_A 85 AGWYTVSA 92 (116)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 77776654
No 314
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.48 E-value=3.2e-07 Score=56.20 Aligned_cols=62 Identities=23% Similarity=0.408 Sum_probs=41.1
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
..|.|+|++. .+.. ...++.. ... .+...|.|.+++.+|+|.|.|.+.|. +.....+.|.|.
T Consensus 35 p~v~W~k~~~--~~~~------~~~~~~~-~~~-~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 35 PVVSWLRNRQ--PVRP------DQRRFAE-EAE-GGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVR 97 (99)
T ss_dssp CEEEEEETTE--ECCC------BTTEEEE-ECG-GGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEECCE--ECCC------CCCEEEE-ECC-CCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEEEE
Confidence 4689999874 2111 1123332 222 23457999999999999999999998 656666666664
No 315
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.47 E-value=1.2e-06 Score=53.44 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=43.3
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
..|.|+|++. .+ ..+.|+.+... .+...|.|.+++.+|+|.|.|.+.|. +.....+.|.|.
T Consensus 32 ~~v~W~~~~~-~~--------~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 32 TQVTWYFGVR-QL--------ENSEKYEITYE--DGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVK 93 (97)
T ss_dssp CEEEEEETTE-EC--------CSSSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEET
T ss_pred CEEEEEECCE-EC--------cCCCCEEEEEc--CCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEEE
Confidence 4789999873 11 12356654332 24558999999999999999999998 666666666664
No 316
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.47 E-value=1.3e-06 Score=56.58 Aligned_cols=37 Identities=27% Similarity=0.340 Sum_probs=33.1
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE 76 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~ 76 (169)
.+.|+|.++...|+|.|.|.+.|. +.....++|+|.+
T Consensus 74 ~~~L~I~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 74 TFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEECSCCTTSCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred eEEEEEccCCcccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 358999999999999999999998 7777788999987
No 317
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.46 E-value=9.1e-07 Score=55.77 Aligned_cols=77 Identities=16% Similarity=0.112 Sum_probs=50.2
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeecee
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEA 155 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (169)
.+|.++..+..+.+.+|+.+.|.|.+.+. |.|.+.|++++..+..+....... ......+. +.....+|.+
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~--p~p~i~W~k~~~~~~~~~~~~~~~-~~~~~~L~------I~~v~~~D~G 76 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGT--QPITCTWMKFRKQIQESEHMKVEN-SENGSKLT------ILAARQEHCG 76 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESS--SSCEEEEEESSSBCCCSSSEEEEE-CSSEEEEE------ETTCCTTTCE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcC--CCCEEEEEECCEECcCCCCEEEEE-cCCEEEEE------ECCCChhcCE
Confidence 35666666678899999999999999996 457999999998876543222111 11111222 3445566677
Q ss_pred eEEEee
Q psy1826 156 TYILAG 161 (169)
Q Consensus 156 ~~~~~~ 161 (169)
.|.+..
T Consensus 77 ~Y~C~a 82 (114)
T 2cqv_A 77 CYTLLV 82 (114)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 776654
No 318
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.44 E-value=1.3e-06 Score=53.30 Aligned_cols=47 Identities=13% Similarity=0.209 Sum_probs=38.2
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+|.+...+....+.+|+.+.|.|.+.+.| .|.+.|++++..+..+.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p--~p~v~W~~~g~~~~~~~ 51 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEP--RPTAIWTKDGKAITQGG 51 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEES--CCEEEEEETTEECCSSS
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecC--CCEEEEEECCEECcCCC
Confidence 355666667778999999999999999964 56999999999886553
No 319
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.44 E-value=7.4e-07 Score=57.85 Aligned_cols=76 Identities=22% Similarity=0.391 Sum_probs=47.0
Q ss_pred CcEEEEEEcCce---e-EEEEcce--eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCc----eEEEE
Q psy1826 3 LAQISWVRHRDI---H-LLTVSGY--TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPI----GISMY 71 (169)
Q Consensus 3 ~~~V~W~k~~~~---~-~~~~~~~--~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~----~~~~~ 71 (169)
...|.|+|+..+ . ++..... ......|+.+......+.+.|.|.+++.+|+|.|.|.+.+. ... ...+.
T Consensus 31 ~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~s~~~~ 110 (129)
T 3rrq_A 31 SFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKLQIKESLRAE 110 (129)
T ss_dssp CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEECGGGCEEEECCCEE
T ss_pred CcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChhHCEEEEEEEEecCCCceeeEeceEE
Confidence 357999986321 1 1211111 11124688865544457789999999999999999999886 322 34467
Q ss_pred EEEeccc
Q psy1826 72 LSVVEPI 78 (169)
Q Consensus 72 l~v~~~p 78 (169)
|.|...+
T Consensus 111 L~V~~~~ 117 (129)
T 3rrq_A 111 LRVTERR 117 (129)
T ss_dssp EEEECCC
T ss_pred EEEecCc
Confidence 7776543
No 320
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=98.44 E-value=1.3e-06 Score=62.74 Aligned_cols=109 Identities=21% Similarity=0.312 Sum_probs=66.8
Q ss_pred EEEEEEcCceeEEEEccee-----ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEEec-
Q psy1826 5 QISWVRHRDIHLLTVSGYT-----YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSVVE- 76 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~-----~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v~~- 76 (169)
.+.|+++.++..+..-.+. -....||..... -.++.|.|.+++.+|++.|.|+.... ........|+++.
T Consensus 32 y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~S--gt~ftLtIs~lq~eD~A~YyC~~~~~~~~tFG~GTkLeikr~ 109 (259)
T 4f9l_D 32 WLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGS--ATGFTLTISSLQPEDIATYYCQQGHSYPYTFGGGTKLDIKRA 109 (259)
T ss_dssp CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE--TTEEEEEEESCCGGGCEEEEEEECSSSSCCBCCCCEECBCCC
T ss_pred CEEEEEECCCCCCEEEEECCCccCCCCCCCEEeecc--CCeEEEEEcccChhhCEEEEEeecCCCCCCccCCeEEEEecc
Confidence 4889987654333322211 112468886543 25678999999999999999987544 2222223333321
Q ss_pred ---------cc------------eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEE
Q psy1826 77 ---------PI------------TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLH 115 (169)
Q Consensus 77 ---------~p------------~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 115 (169)
++ ..+.......+++|+.+.|.|.+.|...-...+.|.+
T Consensus 110 ~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~aSG~tfs~y~~~WvR 169 (259)
T 4f9l_D 110 DAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKASGYTFTRYYLYWVK 169 (259)
T ss_dssp ----------------------CCCEEEECCCEEESSSCEEEEEEEESSCGGGSCEEEEE
T ss_pred ccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEeeeCCCcccCcEEEEE
Confidence 00 1111122235889999999999998644456788886
No 321
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.44 E-value=7.4e-07 Score=56.59 Aligned_cols=50 Identities=20% Similarity=0.301 Sum_probs=34.9
Q ss_pred CCCeEEEec-CCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec
Q psy1826 27 DQRFSCIHK-PQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE 76 (169)
Q Consensus 27 ~~r~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~ 76 (169)
..|+.+... ...+.++|.|.+++.+|+|.|.|.+.+. +.....+.|.|.+
T Consensus 74 ~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 74 KGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp TTTEEECCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCeeEEEcccccCCeEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 357764332 1123458999999999999999999887 4445566776654
No 322
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=5.7e-07 Score=55.37 Aligned_cols=58 Identities=21% Similarity=0.378 Sum_probs=40.0
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP 77 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~ 77 (169)
.|.|+|++.. +. ...|+.+ . .. .|.|.+++.+|+|.|.|.+.|. +.....+.|.|...
T Consensus 33 ~i~W~k~g~~-~~--------~~~~~~~-~-~~----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 91 (99)
T 2cr3_A 33 SINWLRDGVQ-LA--------ESNRTRI-T-GE----EVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDA 91 (99)
T ss_dssp EEEEEESSSB-CC--------CCSSEEE-C-SS----EEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBCSC
T ss_pred eEEEEECCEE-CC--------CCCcEEE-E-CC----EEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEecC
Confidence 6899998741 11 1235542 2 33 8999999999999999999997 55555555555443
No 323
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.43 E-value=3.4e-07 Score=57.04 Aligned_cols=81 Identities=16% Similarity=0.223 Sum_probs=46.4
Q ss_pred EEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEE
Q psy1826 70 MYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVEL 149 (169)
Q Consensus 70 ~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (169)
+.+.+..+|.+...+....+.+|+.+.|.|.+.+. |.|.+.|++++..+........... ...+. +...
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~--p~p~i~W~~~~~~~~~~~~~~~~~~---~~~L~------i~~v 71 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGN--PPPQIMWFKDNETLVEDSGIVLKDG---NRNLT------IRRV 71 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC------CCEEEEESSSBCCCBTTEEEETT---TTEEE------ECSC
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCc--CCCeEEEEECCeEcccCCCeEEeCC---CcEEE------Eeec
Confidence 34556667777777778899999999999999886 4569999999987765433221111 11122 3344
Q ss_pred eeeceeeEEEee
Q psy1826 150 TWKLEATYILAG 161 (169)
Q Consensus 150 ~~~~~~~~~~~~ 161 (169)
..+|.+.|.+..
T Consensus 72 ~~~D~G~Y~C~a 83 (108)
T 3kvq_A 72 RKEDEGLYTCQA 83 (108)
T ss_dssp CGGGCEEEEEEE
T ss_pred CcccCEEEEEEE
Confidence 566667776654
No 324
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.43 E-value=1.2e-06 Score=54.84 Aligned_cols=36 Identities=31% Similarity=0.327 Sum_probs=30.9
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
...|.|.+++.+|+|.|.|.+.|. +.....+.|.|.
T Consensus 71 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 71 LFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eEEEEEecCCCccCEEEEEEEecCCCceEEEEEEEEe
Confidence 458999999999999999999998 777777777764
No 325
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.43 E-value=6.2e-07 Score=62.63 Aligned_cols=104 Identities=18% Similarity=0.197 Sum_probs=62.9
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQII 82 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~ 82 (169)
..|.|+|++. .+... ...|+.+... .....|.|.++..+|+|.|.|.+.|. +.....+.|.|..+|....
T Consensus 48 p~i~W~~~g~--~l~~~-----~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~ 118 (215)
T 3mtr_A 48 ATISWFRDGQ--LLPSS-----NYSNIKIYNT--PSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPS 118 (215)
T ss_dssp CEEEEEETTE--ESSCS-----SSCSEEEEEE--TTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCCCCE
T ss_pred CEEEEEECCe--ECCCC-----CCccEEEecC--CCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCCCCc
Confidence 3789999873 22111 1135553322 13448999999999999999999998 6666777777765543211
Q ss_pred cCCcEEEcCCCcEEEEEEeecC--CCCCC--eeEEEECCE
Q psy1826 83 GGPDMYINKGSTMNLTCVIKHS--PEPPP--AIYWLHNTE 118 (169)
Q Consensus 83 ~~~~~~v~~g~~~~l~C~~~~~--p~p~~--~i~W~~~~~ 118 (169)
. ... ...+..+.+.|..... ..|.+ .+.|.+++.
T Consensus 119 ~-~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~ 156 (215)
T 3mtr_A 119 I-DQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGE 156 (215)
T ss_dssp E-EEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTC
T ss_pred c-eEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCC
Confidence 1 011 2345677888874321 11222 477877664
No 326
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=6.5e-07 Score=57.36 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=33.1
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP 77 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~ 77 (169)
.+.|+|.++...|+|.|.|.+.+. +..+..+.|.|..+
T Consensus 79 ~~~L~I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 79 TVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp EEEEEESSCCTTTCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred eEEEEEeeCChhhCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 358999999999999999999998 77777888888764
No 327
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.41 E-value=7.5e-07 Score=55.46 Aligned_cols=50 Identities=20% Similarity=0.236 Sum_probs=35.2
Q ss_pred CCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 26 SDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 26 ~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
...|+.+......+.++|.|.+++.+|+|.|.|.+.+. +.....+.|.|.
T Consensus 57 ~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 57 KSSRYQLKGDLNKGDVSLIIKNVTLDDHGTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp SCTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEECCSSTTCCEEEEEEEE
T ss_pred ccceEEEccCccCCcEeEEEccCCChhCeEEEEEEEcCCcccceEEEEEEE
Confidence 35677643222234558999999999999999999887 444555666654
No 328
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.41 E-value=5.1e-07 Score=55.31 Aligned_cols=34 Identities=29% Similarity=0.296 Sum_probs=28.8
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
.|.|.+++.+|+|.|.|.+.|. +.....+.|.|.
T Consensus 63 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 63 ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97 (98)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEeCCChhhCEEEEEEecCCCCccccEEEEEEe
Confidence 8999999999999999999998 666666666653
No 329
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.41 E-value=9.4e-07 Score=55.61 Aligned_cols=63 Identities=24% Similarity=0.289 Sum_probs=43.9
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEecccee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQ 80 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~ 80 (169)
-.|.|+|++. .+. .+.|+.+.... ....|.|.+++.+|+|.|.|.+ +.....+.|.|..+|..
T Consensus 47 p~v~W~k~~~-~l~--------~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a---~~~~~~~~l~V~~~p~~ 109 (113)
T 2edh_A 47 APVEWWKGHE-TLR--------DGDRHSLRQDG--ARCELQIRGLVAEDAGEYLCMC---GKERTSAMLTVRAMPSG 109 (113)
T ss_dssp CCCEEEESSS-BCC--------CSSSEEEEEET--TEEEEEECSCCSTTCEEEEEEE---TTEEEEEEEEECCCCCS
T ss_pred CcEEEEECCE-ECC--------CCCcEEEEECC--CEEEEEECCCChhhCEEEEEEe---CCCCEEEEEEEeCCCCC
Confidence 3588999874 121 23566644322 3457999999999999999999 44566678888877653
No 330
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.41 E-value=6.9e-07 Score=54.22 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=35.3
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECC--EEeec
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNT--EVSQL 122 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~--~~~~~ 122 (169)
+|.+...+....+.+|+.+.|.|.+.|. |.|.+.|++++ .++..
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~--P~p~i~W~k~~~~~~~~~ 47 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGA--PDPTATWTVGDSGAALAP 47 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECC--SSCEEEEECSTTTCBCST
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEc--CCCEEEEEECCCCcccCC
Confidence 4555555567889999999999999996 45699999999 77654
No 331
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.40 E-value=2.4e-06 Score=55.09 Aligned_cols=75 Identities=20% Similarity=0.297 Sum_probs=47.6
Q ss_pred cEEEEEEcCce----eEEEEcc-eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-CceEEEEEEEecc
Q psy1826 4 AQISWVRHRDI----HLLTVSG-YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-PIGISMYLSVVEP 77 (169)
Q Consensus 4 ~~V~W~k~~~~----~~~~~~~-~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~v~~~ 77 (169)
..+.|+|+... .++.... .......|+.+......+.+.|.|.+++.+|+|.|.|.+...+ .....+.|.|..+
T Consensus 33 ~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~~~~~~~~~~~~v~L~V~~~ 112 (124)
T 2nms_A 33 YLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVTIDPA 112 (124)
T ss_dssp SEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEcCCCCccEEEEEEEeCC
Confidence 46899997532 1111110 0011246888655445578899999999999999999998762 2334456666554
Q ss_pred c
Q psy1826 78 I 78 (169)
Q Consensus 78 p 78 (169)
|
T Consensus 113 ~ 113 (124)
T 2nms_A 113 P 113 (124)
T ss_dssp C
T ss_pred C
Confidence 3
No 332
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.39 E-value=7.3e-07 Score=54.91 Aligned_cols=62 Identities=18% Similarity=0.152 Sum_probs=42.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
..|.|+|++.. +. .+.|+.+.... ....|.|.+++.+|+|.|.|.+ +.....+.|.|..+|.
T Consensus 37 ~~v~W~k~g~~-i~--------~~~~~~~~~~~--~~~~L~I~~~~~~D~G~Y~C~a---g~~~~~~~l~V~~~P~ 98 (100)
T 2yuv_A 37 LEVKWYKNGQE-IR--------PSTKYIFEHKG--CQRILFINNCQMTDDSEYYVTA---GDEKCSTELFVRSGPS 98 (100)
T ss_dssp SCEEEEESSCB-CC--------CBTTEEEEEET--TEEEEEEEEECTTTCCEEEEEE---TTEEEEEEEEECCSCC
T ss_pred ceEEEEECCEE-CC--------CCCCEEEEecC--CEEEEEEcCCCcCcCEEEEEEE---CCceEEEEEEEecCCC
Confidence 46899998742 21 12455533221 3347999999999999999999 4455667788877653
No 333
>1ymm_D T cell receptor alpha chain; protein-protein complex, T cell repertoire, auto-immunity, I system; HET: NAG; 3.50A {Homo sapiens} SCOP: b.1.1.1
Probab=98.39 E-value=3.9e-08 Score=69.21 Aligned_cols=102 Identities=17% Similarity=0.219 Sum_probs=39.0
Q ss_pred cEEEEEEcCceeEE----E-EcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-----CceEEEEEE
Q psy1826 4 AQISWVRHRDIHLL----T-VSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-----PIGISMYLS 73 (169)
Q Consensus 4 ~~V~W~k~~~~~~~----~-~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-----~~~~~~~l~ 73 (169)
..|.|+|+..+..+ . ........+.|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. .......|.
T Consensus 30 ~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~g~gt~L~ 109 (207)
T 1ymm_D 30 NNLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTSKKSSSLLITASRAADTASYFCATDTTSGTYKYIFGTGTRLK 109 (207)
T ss_dssp EEEEEECCCSSCCCCCCCEEESSSCCCCSSSCCBCCBGGGTBCCBCCSSCCSTTCSCCEEEEEETTSCSCEEECC-----
T ss_pred ceEEEEEECCCCCcEEEEEEcCCCccccCCCEEEEEcCCCCEEEEEECcCCcccCceEEEEEEcCCCcceeeECCCEEEE
Confidence 46899987532111 1 1111112356877543333356689999999999999999987631 111234555
Q ss_pred Eecc-----ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCee
Q psy1826 74 VVEP-----ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAI 111 (169)
Q Consensus 74 v~~~-----p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i 111 (169)
|... |.+.... .....+.|.|.+.++ .|.|.+
T Consensus 110 V~~~~~~~~P~V~~~~-----~~~~~vtL~C~~~gf-~P~p~v 146 (207)
T 1ymm_D 110 VLANIQNPDPAVYQLR-----DSKSSDKSVCLFTDF-DSQTNV 146 (207)
T ss_dssp -------------------------------------------
T ss_pred EECCCCCCCCEEEecC-----CCCCCeEEEEEcccc-ccCCcc
Confidence 5432 1111111 112378999999986 355566
No 334
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.39 E-value=3.9e-06 Score=53.92 Aligned_cols=71 Identities=21% Similarity=0.367 Sum_probs=45.8
Q ss_pred cEEEEEEcCcee----EEEEc-ceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEE
Q psy1826 4 AQISWVRHRDIH----LLTVS-GYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSV 74 (169)
Q Consensus 4 ~~V~W~k~~~~~----~~~~~-~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v 74 (169)
..+.|+|+.... ++... ........|+.+......+.+.|.|.+++.+|+|.|.|.+...+ .....+.|.+
T Consensus 42 ~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~v~~~~~~~~~~~~~l~L 119 (122)
T 1hkf_A 42 EKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYL 119 (122)
T ss_dssp CEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECTTTCCEEEEEEEEE
T ss_pred cEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEcCCCCcccccEEEEE
Confidence 479999875321 12111 11122457998654455678899999999999999999998763 3344444443
No 335
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.39 E-value=6.4e-07 Score=54.69 Aligned_cols=55 Identities=22% Similarity=0.428 Sum_probs=38.5
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEE
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSV 74 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v 74 (169)
.|.|+|++. .+. .+.|+.+ . .+ .|.|.+++.+|+|.|.|.+.|. +.....+.|.|
T Consensus 39 ~i~W~k~g~-~~~--------~~~~~~~-~-~~----~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 39 SINWLRDGV-QLV--------ESNRTRI-T-GE----EVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEEEEBTTB-CCC--------CCSSEEE-C-SS----EEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred ceEEEECCE-ecC--------CCCCEEE-e-CC----EEEECCCChHHCEEEEEEeccCCCcEEEEEEEEE
Confidence 689999763 121 2245552 2 34 8999999999999999999997 55555555544
No 336
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.39 E-value=8.5e-07 Score=58.46 Aligned_cols=47 Identities=15% Similarity=0.299 Sum_probs=34.3
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
..|+.+.... ....|.|.+++.+|+|.|.|.|.|. +.....+.|.|.
T Consensus 91 ~~r~~i~~~~--~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 91 EGRVRVETTK--DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp SSSCEEEEET--TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCeEEEEeCC--CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 3566543221 2347999999999999999999998 766666666653
No 337
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.38 E-value=2.3e-06 Score=51.63 Aligned_cols=44 Identities=25% Similarity=0.344 Sum_probs=35.3
Q ss_pred eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 79 TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 79 ~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+...+....+.+|+.+.|.|.+.|.| .|.+.|++++.++....
T Consensus 5 ~i~~~p~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~~~~~~~~~ 48 (91)
T 3bfo_A 5 QICVEPTSQKLMPGSTLVLQCVAVGSP--IPHYQWFKNELPLTHET 48 (91)
T ss_dssp EEEECCCCEEECTTSCEEEECEEECSS--CCEEEEEETTEECTTCC
T ss_pred EEEECCCccEecCCCcEEEEEEeccCC--CCEEEEEcCCeeCCcCC
Confidence 444556677899999999999999964 56999999999876543
No 338
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.38 E-value=7.8e-07 Score=56.16 Aligned_cols=74 Identities=22% Similarity=0.302 Sum_probs=43.7
Q ss_pred cEEEEEEcCce------eEEEEc-c-eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-CceEEEEEEE
Q psy1826 4 AQISWVRHRDI------HLLTVS-G-YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-PIGISMYLSV 74 (169)
Q Consensus 4 ~~V~W~k~~~~------~~~~~~-~-~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~v 74 (169)
..|.|+|+... .++... . .......|+.+......+.++|.|.+++.+|+|.|.|.+.+.+ .....+.+.+
T Consensus 28 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~l 107 (116)
T 2or8_A 28 TTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDSGLYCCRVEIPGWFNDQKVTFSL 107 (116)
T ss_dssp CCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEEEEECCSSTTCCEEEEEEE
T ss_pred cEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccCEEEEEEEEcCCcccccEEEEEE
Confidence 46899997521 111111 0 1123457877432222355689999999999999999998863 3222344444
Q ss_pred ecc
Q psy1826 75 VEP 77 (169)
Q Consensus 75 ~~~ 77 (169)
.+.
T Consensus 108 ~V~ 110 (116)
T 2or8_A 108 QVK 110 (116)
T ss_dssp EEE
T ss_pred EEC
Confidence 433
No 339
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.37 E-value=1.2e-06 Score=55.38 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=44.3
Q ss_pred CcEEEEEEcCc------eeEEEEcc--eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-CceEEEEEE
Q psy1826 3 LAQISWVRHRD------IHLLTVSG--YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-PIGISMYLS 73 (169)
Q Consensus 3 ~~~V~W~k~~~------~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~ 73 (169)
...|.|+|+.. ..++-... .......|+.+......+.++|.|.+++.+|+|.|.|.+.+.+ .....+.|.
T Consensus 28 ~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~v~L~ 107 (115)
T 2or7_A 28 IVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDGGPYCCVVEIPGAFHFVDYMLE 107 (115)
T ss_dssp SCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEEEEECCTTSCEEEEEEEE
T ss_pred CEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHHCEEEEEEEECCCceeEEEEEEE
Confidence 35799999751 11221111 1122456877432222356689999999999999999998763 234444555
Q ss_pred Ee
Q psy1826 74 VV 75 (169)
Q Consensus 74 v~ 75 (169)
|.
T Consensus 108 V~ 109 (115)
T 2or7_A 108 VK 109 (115)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 340
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.37 E-value=2.7e-07 Score=57.72 Aligned_cols=47 Identities=13% Similarity=0.315 Sum_probs=38.2
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccc
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLM 125 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~ 125 (169)
+|.+...+..+.+.+|+.+.|.|.+.+.| .|.+.|++++..+.....
T Consensus 9 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~~~g~~~~~~~~ 55 (110)
T 2dm3_A 9 RPHFLQAPGDLTVQEGKLCRMDCKVSGLP--TPDLSWQLDGKPVRPDSA 55 (110)
T ss_dssp CCEEEECCCEEEEESSSCBCCEEEEECSS--CCEEECBBSSSBCCCCSS
T ss_pred CCcEEeCCCcEEEeCCCEEEEEEEEEEcC--CCEEEEEECCEECCCCCc
Confidence 56666667788999999999999999964 569999999988765543
No 341
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.37 E-value=3.1e-07 Score=56.04 Aligned_cols=49 Identities=14% Similarity=0.298 Sum_probs=34.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|.|+|+|. .+. .+.|+.+.... +...|.|.++..+|+|.|.|.|.|.
T Consensus 35 ~~v~W~k~g~-~i~--------~~~~~~i~~~~--~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 35 APVRWYKDGQ-EVE--------ESDFVVLENEG--PHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp SCCEEEETTS-CCC--------CCSSCEEEEET--TEEEEEESSCCGGGCSEEEEECSSC
T ss_pred cEEEEEECCE-Eee--------eeeeeeEEecC--CeEEEEeCCCChhhcEEEEEEEcce
Confidence 4689999874 221 23455543322 3457999999999999999998763
No 342
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.36 E-value=9.8e-07 Score=55.21 Aligned_cols=46 Identities=20% Similarity=0.364 Sum_probs=37.5
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+|.+...+....+.+|+.+.|.|.+.+. |.|.+.|++++..+...
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~--p~p~v~W~k~g~~~~~~ 52 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGN--PKPKIYWFKDGKQISPK 52 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCS--SCCEEEEECSSCBCCTT
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEec--CCCEEEEEECCEECCCC
Confidence 35666666677889999999999999986 45699999999887654
No 343
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.36 E-value=4.1e-06 Score=52.39 Aligned_cols=56 Identities=21% Similarity=0.271 Sum_probs=36.1
Q ss_pred cEEEEEEcCceeEEEEcceee-------cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDIHLLTVSGYTY-------TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~-------~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
+.|.|+|++............ .-..|+.+...+. +|.|.+++.+|+|.|.|.+.+.
T Consensus 29 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~----sL~I~~v~~~D~G~Y~C~v~~~ 91 (110)
T 1ncn_A 29 LVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSW----TLRLHNLQIKDKGLYQCIIHHK 91 (110)
T ss_dssp EEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTT----EEEECSCCGGGCEEEEEEEEEE
T ss_pred EEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCE----EEEEcCCChHHCEEEEEEEEcC
Confidence 369999976422221111110 1134666433333 9999999999999999999886
No 344
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.36 E-value=5.7e-06 Score=50.39 Aligned_cols=72 Identities=13% Similarity=0.067 Sum_probs=46.2
Q ss_pred ecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEee
Q psy1826 82 IGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILAG 161 (169)
Q Consensus 82 ~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
..+....+.+|+.+.|.|.+.+.+ |.|.+.|++++.++..+....... ......+. +.....+|.+.|.+..
T Consensus 6 ~~~~~~~v~~G~~v~l~C~~~g~~-p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~------i~~v~~~D~G~Y~C~a 77 (97)
T 2bk8_A 6 GQIMHAVGEEGGHVKYVCKIENYD-QSTQVTWYFGVRQLENSEKYEITY-EDGVAILY------VKDITKLDDGTYRCKV 77 (97)
T ss_dssp CCCCCEEECTTCCEEEEEEEESCC-TTCEEEEEETTEECCSSSSEEEEE-ETTEEEEE------ECSCCGGGCEEEEEEE
T ss_pred ccCcCEEEcCCCcEEEEEEEeccC-CCCEEEEEECCEECcCCCCEEEEE-cCCeEEEE------EecCChhhCeEEEEEE
Confidence 345578899999999999999962 567999999999876543322211 11111122 3345566777776654
No 345
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.36 E-value=9.5e-07 Score=54.20 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=27.3
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEE
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSV 74 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v 74 (169)
.|.|.+++.+|+|.|.|.+.|. +.....+.|.|
T Consensus 66 ~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 66 SLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEEE
Confidence 8999999999999999999997 55555555554
No 346
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.36 E-value=1.9e-07 Score=58.42 Aligned_cols=40 Identities=28% Similarity=0.352 Sum_probs=33.0
Q ss_pred CeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccc
Q psy1826 39 EDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPI 78 (169)
Q Consensus 39 ~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p 78 (169)
+...|.|.+++.+|+|.|.|.+.|. +.....+.|.|..+|
T Consensus 64 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p 104 (110)
T 2dm3_A 64 GVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKE 104 (110)
T ss_dssp SCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEEECCC
T ss_pred CeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEEeCCC
Confidence 3458999999999999999999998 666667777777654
No 347
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=98.35 E-value=2.6e-06 Score=53.97 Aligned_cols=75 Identities=19% Similarity=0.389 Sum_probs=46.0
Q ss_pred cEEEEEEcC-ce-----eEEEEcc--eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC---CceEEEEE
Q psy1826 4 AQISWVRHR-DI-----HLLTVSG--YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP---PIGISMYL 72 (169)
Q Consensus 4 ~~V~W~k~~-~~-----~~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~---~~~~~~~l 72 (169)
..|.|+|+. .. .+..... .....+.|+.+......+.++|.|.+++.+|+|.|.|.+...+ .....+.|
T Consensus 28 ~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~v~~~~~~~~~~~~v~L 107 (116)
T 3bia_X 28 NSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNTNRGDSGVYCCRIEVPGWFNDVKKNVRL 107 (116)
T ss_dssp CEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEECSSSSCCEEEEEEE
T ss_pred EEEEEeeecCCCCCCceEEEEECCcccccccCceEEEeccCCCCEEEEEEccCChhHCEEEEEEEEcCCcccceEEEEEE
Confidence 469999976 32 1121111 1122356777543333466789999999999999999997653 22345566
Q ss_pred EEeccc
Q psy1826 73 SVVEPI 78 (169)
Q Consensus 73 ~v~~~p 78 (169)
.|..+|
T Consensus 108 ~V~~~~ 113 (116)
T 3bia_X 108 ELRRAL 113 (116)
T ss_dssp EEECC-
T ss_pred EEecCC
Confidence 665543
No 348
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.35 E-value=1.1e-06 Score=52.82 Aligned_cols=66 Identities=11% Similarity=0.121 Sum_probs=44.1
Q ss_pred CcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEEEe
Q psy1826 85 PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYILA 160 (169)
Q Consensus 85 ~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (169)
.++.+.+|+.+.|.|.+.+ |+|.+.|++||.++..+....... ......+. +.....+|.+.|.+.
T Consensus 4 t~v~~~~G~~v~l~C~vs~---p~p~v~W~k~g~~l~~~~~~~~~~-~~~~~~L~------I~~~~~~D~G~Y~C~ 69 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG---PGGPVRWYKDGERLASQGRVQLEQ-AGARQVLR------VQGARSGDAGEYLCD 69 (84)
T ss_dssp CCEEECTTSCEEEECCCSC---CSTTCEEEETTEECCCCSSEEEEE-CSSCEEEE------ESSCSSTTCEEEEEE
T ss_pred eEEEEecCCCEEEEEEECC---CCcEEEEEECCEEccccccEEEee-cCCeEEEE------ecCCCCcccEEEEEE
Confidence 3578899999999999855 456899999999997665433221 11122222 445566777777764
No 349
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.35 E-value=2.9e-07 Score=55.95 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=28.5
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEE
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSV 74 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v 74 (169)
...|.|.++..+|+|.|.|.+.|. +.....+.|.|
T Consensus 57 ~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 57 TTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEEE
Confidence 347999999999999999999998 65555556554
No 350
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.35 E-value=2.3e-06 Score=52.43 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=49.4
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeecee
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEA 155 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (169)
.+|.+...+....+.+|+.+.|.|.+.+. |.|.+.|++++..+.....+...... +.+. +.....+|.+
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~--p~p~v~W~~~~~~~~~~~~~~~~~~~---~~L~------i~~v~~~d~G 75 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGD--PLPVISWLKEGFTFPGRDPRATIQEQ---GTLQ------IKNLRISDTG 75 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECS--SCCEEEEEESSSEESSSCSSCEECTT---CCEE------EESCCTTTCC
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEc--CCCEEEEEECCEECCCCCCCEEEcCC---CEEE------EccCCcccCE
Confidence 45666666778889999999999999996 45689999999887643322211111 1122 3345556666
Q ss_pred eEEEee
Q psy1826 156 TYILAG 161 (169)
Q Consensus 156 ~~~~~~ 161 (169)
.|.+..
T Consensus 76 ~Y~C~a 81 (100)
T 2edj_A 76 TYTCVA 81 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666654
No 351
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.34 E-value=6.8e-07 Score=55.26 Aligned_cols=62 Identities=21% Similarity=0.420 Sum_probs=43.1
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
..|.|+|++. .+. .+.|+.+... + ....|.|.++..+|+|.|.|.+.| ....+.|.|..+|.
T Consensus 37 ~~v~W~k~g~-~~~--------~~~~~~~~~~-~-~~~~L~I~~v~~~D~G~Y~C~a~n---~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 37 TPVHWLKDRK-AIR--------KSQKYDVVCE-G-TMAMLVIRGASLKDAGEYTCEVEA---SKSTASLHVEEKAS 98 (103)
T ss_dssp CCCCEEESSC-BCC--------CSSSEEEEEE-T-TEEEEEESSCCTTTCSEEEEECSS---CEEEEEEEECCCSS
T ss_pred CcEEEEECCE-Ecc--------CCCCEEEEEC-C-CEEEEEECCCCcccCEEEEEEEcc---CCcEEEEEEeCCCC
Confidence 3688999874 121 2245553322 1 345799999999999999999988 35667788876654
No 352
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.34 E-value=7.4e-07 Score=56.58 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=31.8
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccce
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPIT 79 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 79 (169)
.|.|.+++.+|+|.|.|.+.|. +.....+.|.|...|.
T Consensus 66 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~ 104 (118)
T 1wwc_A 66 CLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPF 104 (118)
T ss_dssp EEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCSCCCC
T ss_pred EEEECCCChhcCEEEEEEEECCCCeEeeEEEEEEccCCC
Confidence 7999999999999999999998 6666677776666554
No 353
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.34 E-value=8e-07 Score=54.47 Aligned_cols=48 Identities=23% Similarity=0.325 Sum_probs=38.8
Q ss_pred EeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 74 VVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 74 v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
+..+|.+...+....+.+|+.+.|.|.+.+.| .|.+.|++++.++...
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~~~g~~~~~~ 55 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTP--VPRITWLLNGQPIQYA 55 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEES--CCCCEEEESSSBCSSC
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeC--CCeEEEEECCEECccc
Confidence 34566766667788999999999999999964 5699999999877644
No 354
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.34 E-value=5.9e-06 Score=53.91 Aligned_cols=60 Identities=27% Similarity=0.471 Sum_probs=40.9
Q ss_pred cEEEEEEcCcee----EEEEcc--eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDIH----LLTVSG--YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~~----~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|.|+|+..+. +..... .......|+.+........+.|.|.+++.+|+|.|.|.+...
T Consensus 40 ~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 105 (134)
T 3bik_B 40 LMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISL 105 (134)
T ss_dssp CEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCCGGGCEEEEEEEEEC
T ss_pred cEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCChHHCEEEEEEEEeC
Confidence 579999974321 111111 112246799865444457889999999999999999998765
No 355
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=2e-07 Score=58.14 Aligned_cols=61 Identities=18% Similarity=0.211 Sum_probs=42.1
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
.|.|+|++.. +. .+.|+.+.... ....|.|.+++.+|+|.|.|.+.+ ....+.|.|..+|.
T Consensus 40 ~v~W~k~g~~-i~--------~~~r~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~~---~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 40 PAMWTVGGKT-VG--------SSSRFQATRQG--RKYILVVREAAPSDAGEVVFSVRG---LTSKASLIVRERSG 100 (104)
T ss_dssp CBCCBSSSSB-CS--------BCSSCEEEEET--TEEEEEECSCCTTTCSCEEEEETT---EEEEECEEEECCCS
T ss_pred eeEEEECCEE-CC--------CCCCEEEEEcC--CEEEEEECCCCHHHCEEEEEEECC---eeEEEEEEEeCCCc
Confidence 4789988741 11 22466543321 345899999999999999998855 34667788887664
No 356
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.33 E-value=1.2e-06 Score=56.28 Aligned_cols=49 Identities=29% Similarity=0.400 Sum_probs=33.4
Q ss_pred CCeEEEecC-CCCeEEEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEEec
Q psy1826 28 QRFSCIHKP-QNEDWTLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSVVE 76 (169)
Q Consensus 28 ~r~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v~~ 76 (169)
.|+.+.... ..++++|.|.+++.+|+|.|.|.+.+. +.....+.|+|..
T Consensus 66 ~R~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE 117 (123)
T 4gjt_B 66 GRVEQPPPPRNPLDGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLE 117 (123)
T ss_dssp TTEECCCSSCCTTBCCEEEESCCSSSCSEEEEEEEESSSCEEEEEEEEEC--
T ss_pred eEEEEecCCCcCCEEEEEECCCChHHCEEEEEEEEECCCCeEEeEEEEEEEE
Confidence 466532221 234568999999999999999998775 4555667777654
No 357
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.33 E-value=1.4e-06 Score=53.46 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=31.5
Q ss_pred cEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 86 DMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 86 ~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+.+.+|+.+.|.|.+.|. |.|.+.|++++..+....
T Consensus 17 ~~~v~~G~~v~l~C~~~g~--p~p~v~W~~~~~~~~~~~ 53 (100)
T 3caf_A 17 LHAVPAANTVKFRCPAGGN--PMPTMRWLKNGKEFKQEH 53 (100)
T ss_dssp EEEECTTCCEEEECCEEEE--SCCEEEEEETTEECCGGG
T ss_pred EEEecCCCEEEEEEEcccc--CCCEEEEEECCEEccccc
Confidence 5778999999999999986 456999999999887654
No 358
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.33 E-value=1.4e-06 Score=53.05 Aligned_cols=75 Identities=9% Similarity=0.130 Sum_probs=45.6
Q ss_pred cceeeecCCc--EEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeece
Q psy1826 77 PITQIIGGPD--MYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLE 154 (169)
Q Consensus 77 ~p~~~~~~~~--~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (169)
|+.++..... +.+.+|+.+.|.|.+.+ |+|.+.|++||.++..+........ .....+. +.....+|.
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~---p~~~v~W~k~g~~i~~~~~~~i~~~-~~~~~L~------I~~v~~~D~ 73 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR---EDAPVRWYKDGQEVEESDFVVLENE-GPHRRLV------LPATQPSDG 73 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC---TTSCCEEEETTSCCCCCSSCEEEEE-TTEEEEE------ESSCCGGGC
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC---CCcEEEEEECCEEeeeeeeeeEEec-CCeEEEE------eCCCChhhc
Confidence 4443333333 34568999999999855 4568999999999876654332211 1112222 445566677
Q ss_pred eeEEEee
Q psy1826 155 ATYILAG 161 (169)
Q Consensus 155 ~~~~~~~ 161 (169)
+.|.+..
T Consensus 74 G~Y~C~a 80 (91)
T 2lvc_A 74 GEFQCVA 80 (91)
T ss_dssp SEEEEEC
T ss_pred EEEEEEE
Confidence 7777653
No 359
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=2.1e-06 Score=53.07 Aligned_cols=74 Identities=22% Similarity=0.227 Sum_probs=48.9
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEAT 156 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (169)
+|.+...+.+..+.+|+.+.|.|.+ . |.|.+.|++||.++..+....... ......+. +.....+|.+.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~--p~p~v~W~k~g~~l~~~~r~~i~~-~~~~~~L~------I~~v~~~D~G~ 75 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--S--ENIPGKWTKNGLPVQESDRLKVVQ-KGRIHKLV------IANALTEDEGD 75 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--S--SCCCEEEEETTEECCCCSSEEEEE-CSSEEEEE------ESSCCGGGCSE
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--C--CCCeEEEEECCEECCCCCcEEEEE-eCCEEEEE------ECCCChhhCEE
Confidence 4455555678899999999999999 4 456999999999987654332221 11112222 44556677777
Q ss_pred EEEee
Q psy1826 157 YILAG 161 (169)
Q Consensus 157 ~~~~~ 161 (169)
|.+..
T Consensus 76 Y~C~a 80 (100)
T 2yuz_A 76 YVFAP 80 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77654
No 360
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.32 E-value=6.1e-06 Score=52.42 Aligned_cols=60 Identities=27% Similarity=0.471 Sum_probs=41.5
Q ss_pred cEEEEEEcCcee----EEEEcc--eeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDIH----LLTVSG--YTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~~----~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|.|+|+.... ++.... .......|+.+........+.|.|.+++.+|+|.|.|.+.+.
T Consensus 30 ~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 95 (117)
T 3bp6_A 30 LMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISL 95 (117)
T ss_dssp CEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEEC
T ss_pred CEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 579999974321 111111 112346899865544567889999999999999999998775
No 361
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.32 E-value=2.1e-05 Score=57.36 Aligned_cols=82 Identities=15% Similarity=0.266 Sum_probs=55.3
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccc--eee-ecCCcEEEcCCCcEEEEEEe--ecCCCC----CCee
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPI--TQI-IGGPDMYINKGSTMNLTCVI--KHSPEP----PPAI 111 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p--~~~-~~~~~~~v~~g~~~~l~C~~--~~~p~p----~~~i 111 (169)
.|.|..+...|+|.|.|.+.+. +.......+.|...+ .+. ..+....+..+..+.|.+.+ .|...| ...+
T Consensus 53 tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTY 132 (304)
T 3shs_A 53 TLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHY 132 (304)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEE
T ss_pred eEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCcee
Confidence 7899999999999999999886 433333333443322 222 22445566778889998887 543112 5799
Q ss_pred EEEECCEEeecc
Q psy1826 112 YWLHNTEVSQLN 123 (169)
Q Consensus 112 ~W~~~~~~~~~~ 123 (169)
.|++++..+...
T Consensus 133 QWyKngt~IsgA 144 (304)
T 3shs_A 133 SWSKGEDVIDTT 144 (304)
T ss_dssp EEEETTEEEESS
T ss_pred EEeeCCeEccCc
Confidence 999999887543
No 362
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.31 E-value=4.2e-06 Score=51.80 Aligned_cols=47 Identities=19% Similarity=0.374 Sum_probs=38.7
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+|.+...+....+.+|+.+.|.|.+.+.| .|.+.|++++..+..+.
T Consensus 12 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p--~p~i~W~~~~~~~~~~~ 58 (107)
T 3irg_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEP--PPVVVWEKGGQQLAASE 58 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEES--CCEEEEEETTEECCCCS
T ss_pred CCCeeEcCCccEEEeCCCeEEEEEEEeecC--CCEEEEEECCeECCCCC
Confidence 466666667788999999999999999964 56999999999886543
No 363
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.30 E-value=3.9e-06 Score=51.81 Aligned_cols=73 Identities=18% Similarity=0.124 Sum_probs=46.9
Q ss_pred eeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecc-eeeEEEEEEEEeeEEEEeeeceeeEE
Q psy1826 80 QIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESS-SFVKRLVVLLSVSIVELTWKLEATYI 158 (169)
Q Consensus 80 ~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (169)
+...+.++.+.+|+.+.|.|.+.+ |++.+.|++++..+..+...+..... .....+. +.....+|.+.|.
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~---~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~------I~~~~~~D~G~Y~ 80 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSE---DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILI------IEGATKADAAEYS 80 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSS---SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEE------EEEECTTTCSEEE
T ss_pred eeccCCCEEEECCCCEEEEEEecC---CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEE------ECCCCcccCEEEE
Confidence 455566788999999999999976 34799999999988765422111111 1111222 3455666777777
Q ss_pred Eee
Q psy1826 159 LAG 161 (169)
Q Consensus 159 ~~~ 161 (169)
+..
T Consensus 81 C~a 83 (103)
T 1x44_A 81 VMT 83 (103)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 364
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.30 E-value=1e-06 Score=55.27 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=44.7
Q ss_pred cEEEEEEcCcee----EEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC-C--ceEEEEEEEec
Q psy1826 4 AQISWVRHRDIH----LLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP-P--IGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~----~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-~--~~~~~~l~v~~ 76 (169)
..|.|+|+.... +............|+.+......+.+.|.|.+++.+|+|.|.|.+.+.. . ......+.|.+
T Consensus 27 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~~~g~~~~~~~~v~v~V 106 (110)
T 2q87_A 27 LNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDFHDPVVEVEVSV 106 (110)
T ss_dssp SEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECTTSCCBCCCSEEEEEEE
T ss_pred ceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEEEecCccCccCCccEEEEEEE
Confidence 579999875321 1111000000246887654333467799999999999999999998862 1 23344555554
Q ss_pred cc
Q psy1826 77 PI 78 (169)
Q Consensus 77 ~p 78 (169)
+|
T Consensus 107 ~p 108 (110)
T 2q87_A 107 FP 108 (110)
T ss_dssp C-
T ss_pred ec
Confidence 43
No 365
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=98.30 E-value=6.1e-06 Score=52.99 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=30.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 67 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 102 (124)
T 1dlf_H 67 KGRFTISRDDSKRRVYLQMNTLRAEDTGIYYCTGIY 102 (124)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEB
T ss_pred CCcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 468987655445788999999999999999999876
No 366
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.30 E-value=8.9e-07 Score=54.28 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=28.0
Q ss_pred eEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEE
Q psy1826 40 DWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSV 74 (169)
Q Consensus 40 ~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v 74 (169)
...|.|.+++.+|+|.|.|.+.|. +.....+.|.|
T Consensus 63 ~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 63 VAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp EEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEEE
T ss_pred eEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEE
Confidence 348999999999999999999998 65555555544
No 367
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.30 E-value=1.1e-06 Score=54.33 Aligned_cols=60 Identities=15% Similarity=0.317 Sum_probs=40.0
Q ss_pred EEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 6 ISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 6 V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
|.|+|++. .+. .+.|+.+... .....|.|.+++.+|+|.|.|.+.|. ...+.|.|..+|.
T Consensus 41 v~W~k~g~-~~~--------~~~~~~~~~~--~~~~~L~I~~~~~~D~G~Y~C~a~n~---~~~~~l~V~~~P~ 100 (104)
T 2e6p_A 41 ATWYKDGQ-KVE--------ESELLVVKMD--GRKHRLILPEAKVQDSGEFECRTEGV---SAFFGVTVQDPSG 100 (104)
T ss_dssp CEEEETTE-ECC--------CBTTBEEEEE--TTEEEEEESSCCTTTCEEEEEECSSC---CCCEEEEEECCCC
T ss_pred cEEeeCCE-ECC--------CCCCEEEEeC--CCEEEEEECCCChhhCEEEEEEECCc---eEEEEEEEcCCCC
Confidence 78999873 221 1235543322 13447999999999999999999885 2245667766653
No 368
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.29 E-value=1.4e-06 Score=53.19 Aligned_cols=63 Identities=17% Similarity=0.289 Sum_probs=42.1
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
..|.|+|++. .+.. ....|+..... .....|.|.++..+|+|.|.|.+.|. +.....+.|.|.
T Consensus 35 p~v~W~~~~~--~~~~-----~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 35 PEVTWSCGGR--KIHS-----QEQGRFHIENT--DDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp CEEEEEETTE--ECCT-----TGGGTEEEEEC--SSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CceEEEECCE--Eeec-----CCCCEEEEEec--CCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 3689999763 2110 01246654332 23458999999999999999999997 555566666654
No 369
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.29 E-value=2.9e-06 Score=52.86 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=47.6
Q ss_pred cceeeecCCc-EEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc-cccceeecceeeEEEEEEEEeeEEEEeeece
Q psy1826 77 PITQIIGGPD-MYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN-LMQRESESSSFVKRLVVLLSVSIVELTWKLE 154 (169)
Q Consensus 77 ~p~~~~~~~~-~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (169)
+|.++...+. ..+.+|+.+.|.|.+ +. |.+.+.|+++|.++..+ ....... ......+. +.....+|.
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~--p~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~~L~------I~~v~~~D~ 84 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-AD--HDAEVKWLKNGQEIQMSGSKYIFES-IGAKRTLT------ISQCSLADD 84 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SS--SSSCCEEEESSSEECCCSSSSEEEE-ETTEEEEE------ECSCSSSSC
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cC--CCCEEEEEECCEECCCCCCeEEEEe-cCCEEEEE------ECCCCcccC
Confidence 4455555555 789999999999999 64 55689999999988765 2222111 11111222 345566777
Q ss_pred eeEEEee
Q psy1826 155 ATYILAG 161 (169)
Q Consensus 155 ~~~~~~~ 161 (169)
+.|.+..
T Consensus 85 G~Y~C~a 91 (104)
T 1pd6_A 85 AAYQCVV 91 (104)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7777764
No 370
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.29 E-value=9.5e-07 Score=54.68 Aligned_cols=62 Identities=19% Similarity=0.215 Sum_probs=42.3
Q ss_pred cEEEEEEcCceeEEEEcceeecCCC--CeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQ--RFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
..|.|+|++. .+. .+. |+.+.... ....|.|.+++.+|+|.|.|.+.| ....+.|.|..+|.
T Consensus 36 ~~v~W~k~g~--~l~-------~~~~~~~~~~~~~--~~~~L~I~~~~~~D~G~Y~C~a~n---~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 36 ANVKWFKNGE--EII-------PGPKSRYRIRVEG--KKHILIIEGATKADAAEYSVMTTG---GQSSAKLSVDLKSG 99 (103)
T ss_dssp CCCEEEETTE--ECC-------CSTTCSEEEEEET--TEEEEEEEEECTTTCSEEEEEETT---EEEEEEEEEECCCS
T ss_pred CeEEEEECCE--ECC-------CCCceEEEEEEcC--CEEEEEECCCCcccCEEEEEEECC---CcEEEEEEEeCCCC
Confidence 4689999873 221 112 55543321 345899999999999999999987 45566777776543
No 371
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.29 E-value=3.8e-06 Score=52.28 Aligned_cols=64 Identities=23% Similarity=0.329 Sum_probs=43.2
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceee
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQI 81 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~ 81 (169)
-.|.|+|++. .+. .+.|+.+... + ....|.|.+++.+|+|.|.|.+.+ ....+.|.|..+|..+
T Consensus 36 p~v~W~k~~~-~~~--------~~~~~~~~~~-~-~~~~L~I~~v~~~D~G~Y~C~a~n---~~~~~~l~V~~~p~~~ 99 (108)
T 2dm7_A 36 APVEWKKGPE-TLR--------DGGRYSLKQD-G-TRCELQIHDLSVADAGEYSCMCGQ---ERTSATLTVRALPARF 99 (108)
T ss_dssp CCCEEESSSS-BCC--------SSSSCEEEEE-T-TEEEEEESSCCTTTCSEEEEEETT---EEEEEECEEECCCSSC
T ss_pred CeeEEEECCE-ECC--------CCCCEEEEec-C-CEEEEEECCCCcccCEEEEEEEcC---CEEEEEEEEecCCHHH
Confidence 3578998764 111 2356664332 2 345799999999999999999955 4556777787755433
No 372
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.27 E-value=7.5e-07 Score=55.52 Aligned_cols=74 Identities=12% Similarity=0.135 Sum_probs=47.9
Q ss_pred eeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeEE
Q psy1826 79 TQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATYI 158 (169)
Q Consensus 79 ~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (169)
.+...+.+..+.+|+.+.|.|.+.+.| +++.+.|++||.++..+....... ......+. +.....+|.+.|.
T Consensus 10 ~~~~~~~~~~v~~G~~v~l~C~v~~~~-~~~~v~W~k~g~~i~~~~r~~~~~-~~~~~~L~------I~~v~~~D~G~Y~ 81 (104)
T 2eny_A 10 GITKRLKTMEVLEGESCSFECVLSHES-ASDPAMWTVGGKTVGSSSRFQATR-QGRKYILV------VREAAPSDAGEVV 81 (104)
T ss_dssp CCSBCCCCEEEESSCCEEEEEECSSCC-CSSCBCCBSSSSBCSBCSSCEEEE-ETTEEEEE------ECSCCTTTCSCEE
T ss_pred EEEecCCCcEEcCCCcEEEEEEEcCCC-CCceeEEEECCEECCCCCCEEEEE-cCCEEEEE------ECCCCHHHCEEEE
Confidence 444556688999999999999998864 235799999999887654322211 11111222 4455666777776
Q ss_pred Ee
Q psy1826 159 LA 160 (169)
Q Consensus 159 ~~ 160 (169)
+.
T Consensus 82 C~ 83 (104)
T 2eny_A 82 FS 83 (104)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 373
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.27 E-value=1.1e-06 Score=54.97 Aligned_cols=60 Identities=20% Similarity=0.370 Sum_probs=41.9
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
.|.|+|++.. + ..+.|+..... .....|.|.+++.+|+|.|.|.+.|. +.....+.|.|.
T Consensus 45 ~v~W~k~g~~-l--------~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 45 TVTWLRKGQV-L--------STSARHQVTTT--KYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp BCCBCSSSSC-C--------TTCSSEEEEEC--SSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEEC
T ss_pred EEEEEECCEE-C--------CCCCCEEEEEC--CCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 5778876631 1 12346554332 23458999999999999999999998 766677777664
No 374
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=98.27 E-value=6.5e-06 Score=52.71 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=29.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEE
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVS 61 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 61 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 101 (121)
T 2xt1_B 67 KGRFTITRDDDKNILYLQMNDLKPEDTAMYYCKAS 101 (121)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEET
T ss_pred CCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 47898766544578899999999999999999986
No 375
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.27 E-value=4.3e-06 Score=52.95 Aligned_cols=44 Identities=18% Similarity=0.326 Sum_probs=34.8
Q ss_pred ccceeeec---CCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEee
Q psy1826 76 EPITQIIG---GPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQ 121 (169)
Q Consensus 76 ~~p~~~~~---~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 121 (169)
.+|.+... .....+.+|+.+.|.|.+.|.| .|.+.|++++.++.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P--~p~i~W~k~g~~l~ 66 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKP--RPQVVWTKGGAPLD 66 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEES--CCEEEEEETTEECC
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCC--CCEEEEEECCEECC
Confidence 35555432 3568899999999999999964 56999999999886
No 376
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.27 E-value=2.3e-06 Score=55.81 Aligned_cols=70 Identities=21% Similarity=0.298 Sum_probs=43.1
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-C----CceEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-P----PIGISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~----~~~~~~~l~v~~~p 78 (169)
..|.|+|+.....+..- .....|+.+... ...+.|.|.+++.+|+|.|.|.+.+. + .....+.|.|...|
T Consensus 45 ~~v~W~r~~~g~~~~~l---~~~~~r~~~~~~--~~~~~L~I~~~~~~DsG~Y~C~a~n~~g~~~~~~g~gt~L~V~~~p 119 (133)
T 3khq_A 45 GALTWFRKRGSQQPQEL---VSEEGRIVQTQN--GSVYTLTIQNIQYEDNGIYFCKQKCDSANHNVTDSCGTELLVLGFS 119 (133)
T ss_dssp SCEEEEEECTTSCCEEC---CCTTTTEEEEEE--TTEEEEEECSCCGGGCEEEEEEESSCC-------CCCEEEEEC---
T ss_pred CEEEEEEeCCCCCCEEE---EEeCCCEEEEcC--CCEEEEEECCCChHHCEEEEEEEEeCCCCcceeECCCEEEEEEecc
Confidence 46899997422111110 113578875443 25678999999999999999999886 2 13445667666544
No 377
>3qjh_A 5C.C7 alpha chain; immunoglobulin domain, T cell receptor, immune system; 1.90A {Mus musculus} PDB: 3qiu_C* 3qiw_C* 3qjf_A 3qib_C 2ial_A 2iam_C 2ian_D 4e41_D 4e42_A 3rug_E* 3axl_A
Probab=98.27 E-value=6e-06 Score=57.93 Aligned_cols=99 Identities=22% Similarity=0.350 Sum_probs=56.2
Q ss_pred cEEEEEEcCceeE---E-EEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC--C--CceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHL---L-TVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT--P--PIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~---~-~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~--~~~~~~~l~v~ 75 (169)
..|.|+|+..+.. + ...... ...+|+.+........+.|.|.+++.+|+|.|.|.+... . .......|.|.
T Consensus 32 ~~v~Wyrq~~g~~~~~l~~~~~~~-~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Cav~~~~~~~~~fG~GT~L~V~ 110 (205)
T 3qjh_A 32 RAVQWFRKNSRGSLINLFYLASGT-KENGRLKSAFDSKERYSTLHIRDAQLEDSGTYFCAAEASNTNKVVFGTGTRLQVL 110 (205)
T ss_dssp EEEEEEEEC-CCCEEEEEEESSEE-EEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTTCCEEEBCCEEEEEE
T ss_pred ceEEEEEECCCCCcEEEEEECCCC-ccCCCEEEEEcCCCCEEEEEEeccccccCeEEEEEEEcCCCCccccCCCEEEEEe
Confidence 3689999753211 1 111111 234788865544457889999999999999999998732 1 12234566665
Q ss_pred ccceeeecCCcEE--EcCCCcEEEEEEeecCC
Q psy1826 76 EPITQIIGGPDMY--INKGSTMNLTCVIKHSP 105 (169)
Q Consensus 76 ~~p~~~~~~~~~~--v~~g~~~~l~C~~~~~p 105 (169)
... ....+.+. ......+.|.|.+.+..
T Consensus 111 ~~~--~~~~p~V~~l~~~~~~~tl~Cl~~~f~ 140 (205)
T 3qjh_A 111 PNI--QNPDPAVYQLRDSKSSDKSVCLFTDFD 140 (205)
T ss_dssp CCC--SSCCCEEEEEEBCC--CCEEEEEESCC
T ss_pred Ccc--cCCCCEEEEecccCCCcEEEEEEEccc
Confidence 320 00011111 11122378999999973
No 378
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.27 E-value=2.6e-06 Score=53.95 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=48.9
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeecee
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEA 155 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (169)
.+|.+...+....+.+|+.+.|.|.+.|. |.+.+.|++++..+.....+...... +.+. +.....+|.+
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~--p~p~i~W~k~g~~~~~~~~~~~~~~~---~~L~------i~~v~~~D~G 75 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGS--PVPTILWRKDGVLVSTQDSRIKQLEN---GVLQ------IRYAKLGDTG 75 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCS--SCCEEEEEESSSBCCTTSTTEEEEET---TEEE------EESCCGGGCC
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEec--CCCEEEEEECCEECcCCCCeEEEccC---CEEE------EccCCcCCCE
Confidence 35666666677889999999999999986 45699999999887653322211111 1122 3345556666
Q ss_pred eEEEee
Q psy1826 156 TYILAG 161 (169)
Q Consensus 156 ~~~~~~ 161 (169)
.|.+..
T Consensus 76 ~Y~C~a 81 (118)
T 2eo9_A 76 RYTCIA 81 (118)
T ss_dssp CEEEEE
T ss_pred EEEEEE
Confidence 666653
No 379
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.26 E-value=4.6e-06 Score=53.30 Aligned_cols=61 Identities=21% Similarity=0.358 Sum_probs=40.6
Q ss_pred CcEEEEEEcCcee---EE-EEcc-e--ee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIH---LL-TVSG-Y--TY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~-~~~~-~--~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.... .+ .... . .. ....|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 100 (121)
T 1kxv_C 31 TYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDSLKPDDTAMYYCKPSLR 100 (121)
T ss_dssp CEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECSCCGGGCEEEEEEEEES
T ss_pred ceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEEec
Confidence 4679999974221 11 1111 0 01 124688866554456789999999999999999998763
No 380
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.25 E-value=3.1e-06 Score=53.56 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=29.4
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+........+.|.|.+++.+|+|.|.|.+.+.
T Consensus 63 ~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~~~ 99 (116)
T 3bj9_1 63 PPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 99 (116)
T ss_dssp CTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCS
T ss_pred CCcEEEEecCCCceEEEEECCCChhHCEEEEEEEeCC
Confidence 4688865543334678999999999999999999775
No 381
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.23 E-value=7.6e-06 Score=51.17 Aligned_cols=45 Identities=22% Similarity=0.270 Sum_probs=32.3
Q ss_pred CCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEec
Q psy1826 28 QRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVE 76 (169)
Q Consensus 28 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~ 76 (169)
.|+.+... .++|.|.+++.+|+|.|.|.+.+.......+.|.|..
T Consensus 64 ~R~~~~~~----~~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~L~V~d 108 (110)
T 2ptt_A 64 GRVYLEEN----NGALHISNVRKEDKGTYYMRVLRETENELKITLEVFD 108 (110)
T ss_dssp TTEEECTT----TCCEEESSCCGGGCEEEEEEEESSSBCCEEEEEEEEC
T ss_pred CcEEEeCC----CccEEECCCCcccCeEEEEEEEcCCCcEEEEEEEEEc
Confidence 47774322 3389999999999999999998764333456666654
No 382
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.23 E-value=1.6e-07 Score=60.16 Aligned_cols=52 Identities=25% Similarity=0.365 Sum_probs=41.8
Q ss_pred EEEEEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCe-eEEEECCEEeec
Q psy1826 68 ISMYLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPA-IYWLHNTEVSQL 122 (169)
Q Consensus 68 ~~~~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~-i~W~~~~~~~~~ 122 (169)
..+.|.|..+|.+.. +....+.+|+.+.|.|.+.|.| .|. +.|++++..+..
T Consensus 5 ~~~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P--~p~~i~W~~~~~~l~~ 57 (122)
T 2cry_A 5 SSGTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTP--PPDRIAWSWKENVLES 57 (122)
T ss_dssp CCCCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSS--CCSEEEEESSSCEECS
T ss_pred eEEEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecC--CCcEeEEEECCEEccC
Confidence 345667778887666 6778889999999999999975 455 999999988765
No 383
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.22 E-value=1.5e-06 Score=53.63 Aligned_cols=61 Identities=16% Similarity=0.342 Sum_probs=40.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p 78 (169)
..|.|+|++. .+. .+.|+.+.... ....|.|.+++.+|+|.|.|.+.+. ...+.|.|..+|
T Consensus 40 ~~v~W~k~g~-~~~--------~~~~~~~~~~~--~~~~L~I~~~~~~D~G~Y~C~a~~~---~~~~~l~V~~p~ 100 (102)
T 2eo1_A 40 TEVTWYKDGK-KLS--------SSSKVRVEAVG--CTRRLVVQQAGQAEAGEYSCEAGGQ---QLSFRLQVAGQC 100 (102)
T ss_dssp SCCEEEETTE-ECC--------CCSSEEEEEET--TEEEEEETTCCTTTCSCEEEEETTE---ECCEEEEEESCC
T ss_pred CceEEEECCE-ECC--------CCCCEEEEEcC--CEEEEEECCCCcccCEEEEEEcCCC---cEEEEEEEeCCC
Confidence 4689999874 121 22355533221 3348999999999999999999653 334667776654
No 384
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.22 E-value=1.2e-06 Score=54.69 Aligned_cols=77 Identities=14% Similarity=0.284 Sum_probs=49.8
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeecee
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEA 155 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (169)
.+|.+...+..+.+.+|+.+.|.|.+.|.| .|.+.|++++.++..+....... ......+. +.....+|.+
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p--~p~v~W~k~g~~l~~~~~~~~~~-~~~~~~L~------I~~v~~~D~G 83 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEP--VPTVTWLRKGQVLSTSARHQVTT-TKYKSTFE------ISSVQASDEG 83 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSS--CCBCCBCSSSSCCTTCSSEEEEE-CSSEEEEE------ECCCCSSCCS
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcC--CCEEEEEECCEECCCCCCEEEEE-CCCEEEEE------ECcCCchhCE
Confidence 345666777889999999999999999964 56999999998776443222111 11112222 3345556666
Q ss_pred eEEEee
Q psy1826 156 TYILAG 161 (169)
Q Consensus 156 ~~~~~~ 161 (169)
.|.+..
T Consensus 84 ~Y~C~a 89 (106)
T 1nct_A 84 NYSVVV 89 (106)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 776644
No 385
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.22 E-value=5.7e-06 Score=61.11 Aligned_cols=79 Identities=11% Similarity=0.162 Sum_probs=56.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccceeeec-CCcEEEcCCCcEEEEEEeecCCCCCC--eeEEEECC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPITQIIG-GPDMYINKGSTMNLTCVIKHSPEPPP--AIYWLHNT 117 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~-~~~~~v~~g~~~~l~C~~~~~p~p~~--~i~W~~~~ 117 (169)
.+.|.+++.. |.|.|++... ......+++.|..+|..... +....+.+|+.+.|.|.+.+.+ |.. .|+|++++
T Consensus 51 ~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~-P~~~l~itW~kg~ 127 (291)
T 1mq8_A 51 VYELSNVQED--SQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGA-PRANLTVVLLRGE 127 (291)
T ss_dssp EEEEESCCSC--CCCEEEEECSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCB-STTTEEEEEESSS
T ss_pred EEEEEecccC--CeEEEEEEcCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCcc-CCCCcEEEEEECC
Confidence 4788888853 4699999766 44556678888877643322 2234478999999999999863 443 58999999
Q ss_pred EEeecc
Q psy1826 118 EVSQLN 123 (169)
Q Consensus 118 ~~~~~~ 123 (169)
..+...
T Consensus 128 ~~l~~~ 133 (291)
T 1mq8_A 128 KELKRE 133 (291)
T ss_dssp SEEEEE
T ss_pred EEeecc
Confidence 887643
No 386
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.22 E-value=9.7e-06 Score=51.59 Aligned_cols=73 Identities=22% Similarity=0.340 Sum_probs=44.7
Q ss_pred cEEEEEEcCcee---EEEEcce--eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEec
Q psy1826 4 AQISWVRHRDIH---LLTVSGY--TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~~---~~~~~~~--~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~ 76 (169)
..+.|+|+.... .+-.... ......|+.+......+.+.|.|.+++.+|+|.|.|.+... ........++|..
T Consensus 33 ~~v~Wyrq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~DsG~Y~C~v~~~~~~l~f~~~~~~~~ 111 (117)
T 1xed_A 33 TRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVLE 111 (117)
T ss_dssp SCEEEEEC-----CEEEEESSSCBCTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEESCGGGCCEEEEEEEEEC
T ss_pred ceEEEEEeCCCCCCEEEEEeCCeEcceEcCCEEEEecCCCCEEEEEECCCChHHCEEEEEEEEeCCCCeeEEEEEEEee
Confidence 468999975321 1111111 11235788865544567889999999999999999998765 3333344555543
No 387
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.21 E-value=1.6e-06 Score=53.89 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=39.0
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEe
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVV 75 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~ 75 (169)
.|.|+|++.. +. ...|+.+.... ....|.|.+++.+|+|.|.|.+.|. .....+.|.|.
T Consensus 38 ~v~W~k~g~~-~~--------~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~n~-~~~~~~~l~V~ 96 (106)
T 2dlt_A 38 TGKWYKNGVE-VR--------PSKRITISHVG--RFHKLVIDDVRPEDEGDYTFVPDGY-ALSLSAKLNFL 96 (106)
T ss_dssp EEEEEESSCB-CC--------CCSSCEEEEET--TEEEEEESSCCTTTCSCEEEEEETS-CCCCCBCEEEE
T ss_pred ceEEEcCCEE-Cc--------CCCCEEEEEeC--CEEEEEECCCCcCCCEEEEEEEccC-CceEEEEEEEE
Confidence 4899998742 21 22455533322 3448999999999999999999996 33334455544
No 388
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=2.2e-06 Score=54.14 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=41.9
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccceeee
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPITQII 82 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~ 82 (169)
.|.|+|++. .+. .+.|+.+.... .+...|.|.+++.+|+|.|.|.+. .....+.|.|..+|.+..
T Consensus 44 ~v~W~k~g~--~l~-------~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~g---~~~~~~~L~V~~~p~~~~ 108 (115)
T 2cr6_A 44 PVHWFLDKT--PLH-------ANELNEIDAQP-GGYHVLTLRQLALKDSGTIYFEAG---DQRASAALRVTEKPSVFS 108 (115)
T ss_dssp SCEEEESSC--EEC-------CSSSCCBCCBT-TTBCCBEECSCCTTTCEEEEEEET---TEECCEEEEEECCSSCCS
T ss_pred ccEEEECCE--ECC-------CCCcEEEEEcC-CCEEEEEEcCCChhhCEEEEEEEC---CeeEEEEEEEECCCceec
Confidence 589999874 221 12343322111 133479999999999999999943 344457888887776443
No 389
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.21 E-value=5.7e-06 Score=52.41 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=30.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (117)
T 2yc1_A 65 KGRFTISRDDAKKTLSLQMNSLRAEDTAVYYCARGGV 101 (117)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 4689876554457789999999999999999998763
No 390
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=1.8e-06 Score=53.25 Aligned_cols=76 Identities=11% Similarity=0.153 Sum_probs=48.7
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccccc--cee-ecceeeEEEEEEEEeeEEEEeeec
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQ--RES-ESSSFVKRLVVLLSVSIVELTWKL 153 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 153 (169)
+|.+...+.+..+.+|+.+.|.|.+.+.| +.+.|++++.++..+... +.. ........+. +.....+|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~---~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~------I~~~~~~D 78 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG---AQVMWMKNGVELTREDSFKARYRFKKDGKRHILI------FSDVVQED 78 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS---CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEE------CSSCCGGG
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC---CEEEEEECCEECCCCCCcceeEEEEECCCEEEEE------ECCCChhh
Confidence 44555556678999999999999998853 699999999887665422 111 1111111122 34556677
Q ss_pred eeeEEEee
Q psy1826 154 EATYILAG 161 (169)
Q Consensus 154 ~~~~~~~~ 161 (169)
.+.|.+..
T Consensus 79 ~G~Y~C~a 86 (101)
T 2edk_A 79 RGRYQVIT 86 (101)
T ss_dssp CSBEEEEC
T ss_pred CEEEEEEE
Confidence 77777654
No 391
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.20 E-value=4.3e-06 Score=50.87 Aligned_cols=58 Identities=16% Similarity=0.337 Sum_probs=37.8
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~ 75 (169)
..|.|+|++. .+. .+.|+.+.... ....|.|.+++.+|+|.|.|.+. .....+.|.|.
T Consensus 37 ~~v~W~k~~~--~l~-------~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~ag---~~~~~~~l~V~ 94 (95)
T 2k1m_A 37 VKVRWQRGGS--DIS-------ASNKYGLATEG--TRHTLTVREVGPADQGSYAVIAG---SSKVKFDLKVI 94 (95)
T ss_dssp CCCEEECSSS--EEC-------SSTTCEEEEET--TEEEEEESSCCTTCCSEEEEEET---TEEEEEEEEEE
T ss_pred CeEEEEECCE--ECC-------CCCcEEEEEcC--CEEEEEEcCCCcccCEEEEEEEC---CceEEEEEEEe
Confidence 4689999874 221 22455533221 34579999999999999999992 33444555553
No 392
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.20 E-value=4.9e-06 Score=52.63 Aligned_cols=60 Identities=22% Similarity=0.293 Sum_probs=39.3
Q ss_pred CcEEEEEEcCcee---EEE-Ecc-eee---cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 3 LAQISWVRHRDIH---LLT-VSG-YTY---TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~-~~~-~~~---~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
...|.|+|+.... .+- ... ... ....|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 30 ~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 97 (116)
T 1tvd_A 30 NPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDSATYYCAFTL 97 (116)
T ss_dssp SCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCChHHCEEEEEEEeC
Confidence 4579999875321 111 111 011 12578886543334677899999999999999999987
No 393
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.20 E-value=6.4e-06 Score=53.20 Aligned_cols=61 Identities=18% Similarity=0.322 Sum_probs=40.7
Q ss_pred CcEEEEEEcCcee---EE-EEcc---eee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIH---LL-TVSG---YTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~-~~~~---~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.... .+ .... ... ....|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 100 (127)
T 1kxt_B 31 SYPMGWYRQAPGKECELSARIFSDGSANYADSVKGRFTISRDNAANTAYLQMDSLKPEDTAVYYCAAGPG 100 (127)
T ss_dssp SSCEEEEEECTTSCEEEEEEECTTSCEEECTTTTTTEEEEECSSSSEEEEEECSCCGGGCEEEEEEECSS
T ss_pred ceEEEEEEECCCCCcEEEEEEecCCCeeeCcccCCeEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEEcC
Confidence 4679999975321 11 1111 011 124689876554457789999999999999999998763
No 394
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.20 E-value=4.5e-06 Score=52.59 Aligned_cols=59 Identities=22% Similarity=0.341 Sum_probs=38.4
Q ss_pred EEEEEEcCcee---EEEEcceeecCCCCeEEEecC-CCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 5 QISWVRHRDIH---LLTVSGYTYTSDQRFSCIHKP-QNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 5 ~V~W~k~~~~~---~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
.|.|+|+.... .+-........+.|+.+.... ....+.|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 93 (113)
T 1h5b_A 31 SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAAEAS 93 (113)
T ss_dssp EEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEEECS
T ss_pred eEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEEEEEEEecC
Confidence 68999875311 111100001234677754432 356779999999999999999999885
No 395
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.20 E-value=4.2e-06 Score=52.35 Aligned_cols=56 Identities=21% Similarity=0.309 Sum_probs=38.3
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|.|+|+.....+.. ....+.|+..........+.|.|.+++.+|+|.|.|.+.+
T Consensus 32 ~~v~W~r~~~~~~~~~---~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 32 DSTNWYRTKLGSTKEQ---TISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp EEEEEEEEETTCCCEE---ECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CEEEEEEcCCCCCcEE---EEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 5789998742221111 1123468875444445678999999999999999999876
No 396
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.20 E-value=6.1e-06 Score=52.27 Aligned_cols=71 Identities=15% Similarity=0.133 Sum_probs=43.3
Q ss_pred CcEEEEEEcCceeEEEEccee---ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 3 LAQISWVRHRDIHLLTVSGYT---YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~---~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
...|.|+|+|. .+...... .....|+.+. ..+ ....|.|.+++.+|+|.|.|...+. ...++.|.|..+|.
T Consensus 35 ~p~v~W~knG~--~l~~~~~~~~~~~~~~r~~i~-~~g-~~~~L~I~~v~~~D~G~Y~~~~~~~--~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 35 IIQGTWFLNGE--ELKSNEPEGQVEPGALRYRIE-QKG-LQHRLILHAVKHQDSGALVGFSCPG--VQDSAALTIQESSG 108 (112)
T ss_dssp CCCCEEEESSC--BCCSSCCCTTSCTTSCEEEEC-CBT-TEEEEEEESCCSTTCSEEEEEEETT--EEEEEEEEEECSSC
T ss_pred CCeEEEEECCE--ECccCcccccccccccEEEEE-eCC-cEEEEEECCCCHHHCccEEEEEECC--eeEEEEEEEeCCCc
Confidence 35689999984 22211000 0000166632 222 3558999999999999998855442 34577888887764
No 397
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.20 E-value=1.9e-06 Score=61.96 Aligned_cols=57 Identities=16% Similarity=0.225 Sum_probs=30.5
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe-ccceeeecCCcEEEcCCCcEEE
Q psy1826 41 WTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV-EPITQIIGGPDMYINKGSTMNL 97 (169)
Q Consensus 41 ~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~-~~p~~~~~~~~~~v~~g~~~~l 97 (169)
..|.|.+++.+|+|.|.|.+.|. +.....+.|.|. .+|.+...+....+.+++.+..
T Consensus 201 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~p~~~~~~~~q~~~~ 259 (268)
T 3mj6_A 201 GSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTISPTPPTDKGQQGILN 259 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC---------------------
T ss_pred EEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCeeeeCCCCCCCCcceeccc
Confidence 38999999999999999999997 666677788874 4455455555666666665533
No 398
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=98.19 E-value=7.5e-06 Score=52.18 Aligned_cols=37 Identities=11% Similarity=0.169 Sum_probs=30.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (120)
T 1mfa_H 65 RAKTKLTAVTSTTTAYMELSSLTSEDSAVYYCTRGGH 101 (120)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 4689876554457789999999999999999998764
No 399
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.19 E-value=1e-05 Score=55.89 Aligned_cols=64 Identities=19% Similarity=0.267 Sum_probs=44.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~ 77 (169)
-.|.|+|++. .+. ...++...... .....|.|.++..+|+|.|.|.+.|. +.....+.|.|..|
T Consensus 147 p~v~W~~~~~-~~~--------~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 147 PEVSWLKNEK-ALA--------QTDHCNLKFEA-GRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp CEEEEEETTE-EEC--------CCSSEEEEEET-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ceEEEEECCe-ECc--------cCCCEEEEEcC-CCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 3689999873 221 22455533322 24458999999999999999999998 66666677776644
No 400
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=98.19 E-value=9e-06 Score=52.30 Aligned_cols=61 Identities=21% Similarity=0.340 Sum_probs=40.8
Q ss_pred CcEEEEEEcCceeEE----EEc-c--ee--ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIHLL----TVS-G--YT--YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~----~~~-~--~~--~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.....+ ... . .. -....|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 100 (124)
T 1yc7_A 31 PCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQCG 100 (124)
T ss_dssp CEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEC
T ss_pred CCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 457999997532111 111 0 00 0124689876654457889999999999999999998763
No 401
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.18 E-value=4.3e-06 Score=51.66 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=47.8
Q ss_pred cceeeecCCc---EEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeec
Q psy1826 77 PITQIIGGPD---MYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKL 153 (169)
Q Consensus 77 ~p~~~~~~~~---~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (169)
+|.++..+.. +.+.+|+.+.|.|.+.+.| .+ +.|++++..+..+........ .....+. +.....+|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p--~~-v~W~k~g~~~~~~~~~~~~~~-~~~~~L~------I~~~~~~D 76 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVD--FP-ATWYKDGQKVEESELLVVKMD-GRKHRLI------LPEAKVQD 76 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTT--CC-CEEEETTEECCCBTTBEEEEE-TTEEEEE------ESSCCTTT
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCC--Cc-cEEeeCCEECCCCCCEEEEeC-CCEEEEE------ECCCChhh
Confidence 5555655655 7889999999999999864 45 899999998876543222211 1111122 33455667
Q ss_pred eeeEEEee
Q psy1826 154 EATYILAG 161 (169)
Q Consensus 154 ~~~~~~~~ 161 (169)
.+.|.+..
T Consensus 77 ~G~Y~C~a 84 (104)
T 2e6p_A 77 SGEFECRT 84 (104)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEE
Confidence 77777654
No 402
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=98.18 E-value=6.1e-06 Score=52.58 Aligned_cols=37 Identities=19% Similarity=0.290 Sum_probs=29.8
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (120)
T 3b9v_A 65 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGG 101 (120)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred CCeEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 4688866543346789999999999999999998763
No 403
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=98.18 E-value=3.6e-06 Score=53.20 Aligned_cols=37 Identities=27% Similarity=0.482 Sum_probs=30.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
+.|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 62 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 98 (114)
T 1u9k_A 62 MGKFTLKHDPSEAMLQVQMTDLQVTDSGLYRCVIYHP 98 (114)
T ss_dssp ETTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred CCcEEEEecCcCCEEEEEECCCChHHCEEEEEEEecC
Confidence 4788865544456789999999999999999999875
No 404
>2d7t_H Anti polyhydroxybutyrate antibody FV, heavy chain; plastic, immune system; 1.70A {Homo sapiens}
Probab=98.18 E-value=3.8e-06 Score=55.23 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=35.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEec
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSVVE 76 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v~~ 76 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.... .......|.|..
T Consensus 65 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~fg~GT~L~V~~ 116 (139)
T 2d7t_H 65 QGRVTMTRDTSISTVYMEVRRLRSDDTAVYYCATGWWGMDVWGQGTLVTVSS 116 (139)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECC
T ss_pred CCeEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEeeCCcCEECCCEEEEEec
Confidence 46888665433467899999999999999999987631 122334555543
No 405
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.18 E-value=4.5e-06 Score=51.44 Aligned_cols=74 Identities=18% Similarity=0.256 Sum_probs=47.3
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEAT 156 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (169)
+|.+...+....+.+|+.+.|.|.+.+.| .+ +.|++++..+..+....... ......+. +.....+|.+.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~p--~~-v~W~k~~~~l~~~~~~~~~~-~~~~~~L~------I~~v~~~D~G~ 77 (103)
T 2e7b_A 8 PVRFQEALKDLEVLEGGAATLRCVLSSVA--AP-VKWCYGNNVLRPGDKYSLRQ-EGAMLELV------VRNLRPQDSGR 77 (103)
T ss_dssp CCCCTBCCCCEEEESSSCEEEEEECSSCC--CS-CEEEESSSBCCCSSSEEEEE-CSSEEEEE------ECSCCTTTCCC
T ss_pred CCEEEecCccEEEECCCcEEEEEEEeCCC--CC-eEEEECCEECCCCCcEEEEE-cCCEEEEE------EccCCcccCEE
Confidence 45555556778999999999999998864 45 99999998876443222211 11111122 34455667777
Q ss_pred EEEe
Q psy1826 157 YILA 160 (169)
Q Consensus 157 ~~~~ 160 (169)
|.+.
T Consensus 78 Y~C~ 81 (103)
T 2e7b_A 78 YSCS 81 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
No 406
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.18 E-value=7.9e-07 Score=54.86 Aligned_cols=65 Identities=18% Similarity=0.194 Sum_probs=39.7
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p 78 (169)
..|.|+|++.. +..... ...|+.+.. .+ ....|.|.++..+|+|.|.|.+.|. ...+.|.|..+|
T Consensus 37 ~~v~W~k~g~~-i~~~~~----~~~~~~~~~-~~-~~~~L~I~~~~~~D~G~Y~C~a~n~---~~~~~l~V~~~P 101 (101)
T 2edk_A 37 AQVMWMKNGVE-LTREDS----FKARYRFKK-DG-KRHILIFSDVVQEDRGRYQVITNGG---QCEAELIVEEKQ 101 (101)
T ss_dssp CCCEEEESSCB-CCCSCC----SSCCCEEEE-CS-SEEEEECSSCCGGGCSBEEEECSSC---EECCBEEEECCC
T ss_pred CEEEEEECCEE-CCCCCC----cceeEEEEE-CC-CEEEEEECCCChhhCEEEEEEEcCC---cEEEEEEEeCCC
Confidence 46899998742 211100 001555332 22 3457999999999999999999873 334456665543
No 407
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=98.18 E-value=8.9e-06 Score=52.07 Aligned_cols=60 Identities=17% Similarity=0.327 Sum_probs=39.4
Q ss_pred CcEEEEEEcCcee---EEEEcce-----eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIH---LLTVSGY-----TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~~~~~-----~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.... .+-.... .-....|+.+.. .....+.|.|.+++.+|+|.|.|.+.+.
T Consensus 29 ~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~-~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 96 (121)
T 2oi9_C 29 HNNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASR-PSQENFSLTLESATPSQTSVYFCASGGG 96 (121)
T ss_dssp CSEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEEC-CSSSEEEEEESSCCGGGCEEEEEEEESS
T ss_pred CCeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEc-CCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 4579999975321 1211110 001246888654 4445789999999999999999998764
No 408
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=98.18 E-value=6.1e-06 Score=52.83 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 67 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 102 (123)
T 2p45_B 67 KGRMTISRDKGKNTVYLQMDSLKPEDTATYYCAAGG 102 (123)
T ss_dssp BTTEEEECCTTSSEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 368886554445678999999999999999999876
No 409
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=98.18 E-value=6.3e-06 Score=52.78 Aligned_cols=61 Identities=18% Similarity=0.313 Sum_probs=40.0
Q ss_pred CcEEEEEEcCcee----EEEEcc----eee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIH----LLTVSG----YTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~----~~~~~~----~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.... +..... ... ....|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (123)
T 2wzp_D 31 NWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARSG 101 (123)
T ss_dssp SEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEETTEEEEEEEECSCCGGGCEEEEEEEEES
T ss_pred CcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 4679999975321 111110 011 124688866544346678999999999999999998763
No 410
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.17 E-value=2.3e-05 Score=48.80 Aligned_cols=41 Identities=12% Similarity=0.316 Sum_probs=32.4
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCC-CCCeeEEEECC
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPE-PPPAIYWLHNT 117 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~-p~~~i~W~~~~ 117 (169)
.|.++..+..+.+.+|+.+.|.|.+.|.|. +.|.+.|++++
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~ 45 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGK 45 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETT
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCC
Confidence 355666677889999999999999998653 11799999987
No 411
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=3.8e-06 Score=51.82 Aligned_cols=45 Identities=18% Similarity=0.417 Sum_probs=35.8
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+|.+...+....+.+|+.+.|.|.+.+ |.+.+.|++++..+..+.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~---~~~~v~W~k~g~~~~~~~ 52 (103)
T 2edf_A 8 PAAIIKPLEDQWVAPGEDVELRCELSR---AGTPVHWLKDRKAIRKSQ 52 (103)
T ss_dssp CCCEEECCCCEEECTTSCEEECCEESS---SSCCCCEEESSCBCCCSS
T ss_pred CcEEEecCCccEEcCCCCEEEEEEEeC---CCCcEEEEECCEEccCCC
Confidence 455555667789999999999999986 345899999998876544
No 412
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.16 E-value=6.5e-06 Score=52.00 Aligned_cols=57 Identities=18% Similarity=0.357 Sum_probs=38.9
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
...|.|+|+.....+.. .+..+.|+..........+.|.|.+++.+|+|.|.|.+.+
T Consensus 31 ~~~v~W~r~~~g~~~~~---~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 31 LGSTCWYRKKSGEGNEE---SISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp CCCEEEEEEETTSCCCE---ECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred CCEEEEEEeCCCCCceE---eEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 35699998742111110 1123468875544445678999999999999999999987
No 413
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=6.2e-06 Score=52.26 Aligned_cols=43 Identities=16% Similarity=0.149 Sum_probs=35.6
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+.+.....+..+.+|+.+.|.|.+.+ .|.+.|++||.++..+.
T Consensus 9 ~~~~~~l~d~~v~eG~~a~f~C~vs~----~p~v~W~knG~~l~~~~ 51 (112)
T 2e6q_A 9 ARLVAGLEDVQVYDGEDAVFSLDLST----IIQGTWFLNGEELKSNE 51 (112)
T ss_dssp CCEEECCCCEEEETTCEEEEEEEESS----CCCCEEEESSCBCCSSC
T ss_pred cEEecCCCCeEEcCCCcEEEEEEECC----CCeEEEEECCEECccCc
Confidence 44555567899999999999999987 24899999999998765
No 414
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.16 E-value=1e-05 Score=50.81 Aligned_cols=35 Identities=29% Similarity=0.463 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+... .+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 64 ~~R~~~~~~--~~~~~L~I~~~~~~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 64 DSRFSMTVN--DQKFDLNIIGTREDDGGEYFCGEVEG 98 (111)
T ss_dssp CTTEEEEES--SSBEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEEc--CCeEEEEECCCChhHCEEEEEEEccC
Confidence 578886542 46789999999999999999999774
No 415
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.16 E-value=5.3e-06 Score=53.67 Aligned_cols=58 Identities=21% Similarity=0.322 Sum_probs=40.3
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...+.|+|+.....+.. ....+.|+..........+.|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~~v~Wyrq~~g~~~~~---li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 88 (126)
T 3moq_A 31 LKDTGWYRTKLGSTNEQ---SISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFYV 88 (126)
T ss_dssp CCEEEEEEEETTCCCCE---ECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEE
T ss_pred CceEEEEEeCCCCCceE---EEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEEc
Confidence 35689999642211111 11234688765555557889999999999999999999775
No 416
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.16 E-value=3.4e-06 Score=52.95 Aligned_cols=83 Identities=18% Similarity=0.150 Sum_probs=52.1
Q ss_pred EEEEEEEecc-ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeE
Q psy1826 68 ISMYLSVVEP-ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSI 146 (169)
Q Consensus 68 ~~~~l~v~~~-p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (169)
..+.|.|... |.+...+....+.+|+.+.|.|.+.+. |.+.|++++.++..+........ .....+. +
T Consensus 9 ~~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~----p~v~W~k~~~~l~~~~~~~~~~~-~~~~~L~------I 77 (113)
T 2edh_A 9 TSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM----APVEWWKGHETLRDGDRHSLRQD-GARCELQ------I 77 (113)
T ss_dssp CCCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC----CCCEEEESSSBCCCSSSEEEEEE-TTEEEEE------E
T ss_pred EEEEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC----CcEEEEECCEECCCCCcEEEEEC-CCEEEEE------E
Confidence 3445666644 455566677899999999999999663 48999999988765432222111 1111122 3
Q ss_pred EEEeeeceeeEEEee
Q psy1826 147 VELTWKLEATYILAG 161 (169)
Q Consensus 147 ~~~~~~~~~~~~~~~ 161 (169)
.....+|.+.|.+..
T Consensus 78 ~~v~~~D~G~Y~C~a 92 (113)
T 2edh_A 78 RGLVAEDAGEYLCMC 92 (113)
T ss_dssp CSCCSTTCEEEEEEE
T ss_pred CCCChhhCEEEEEEe
Confidence 445566777777654
No 417
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.16 E-value=3.5e-06 Score=54.55 Aligned_cols=61 Identities=20% Similarity=0.303 Sum_probs=37.8
Q ss_pred CcEEEEEEcCceeE----EEEcce----eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIHL----LTVSGY----TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~~----~~~~~~----~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+..... +..... ......|+.+......+.++|.|.+++.+|+|.|.|.+.+.
T Consensus 42 ~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~ 110 (132)
T 1nko_A 42 PVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDARMSDAGRYFFRMEKG 110 (132)
T ss_dssp CCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEET
T ss_pred ccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEEcccCcccCeeEEEEEEcC
Confidence 46799999764221 111100 01124788854432345678999999999999999998774
No 418
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.16 E-value=4e-06 Score=51.01 Aligned_cols=71 Identities=13% Similarity=0.192 Sum_probs=46.5
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEAT 156 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (169)
+|.+...+....+.+|+.+.|.|.+.+.| |.+.|++++.++..+...... .+.+. +.....+|.+.
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p---p~i~W~k~g~~~~~~~~~~~~-----~~~L~------i~~~~~~D~G~ 74 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV---QSINWLRDGVQLVESNRTRIT-----GEEVE------VRDSIPADSGL 74 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC---CEEEEEBTTBCCCCCSSEEEC-----SSEEE------ESSCCGGGSEE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC---CceEEEECCEecCCCCCEEEe-----CCEEE------ECCCChHHCEE
Confidence 34444556678899999999999999963 499999999887654321111 11122 33455666667
Q ss_pred EEEee
Q psy1826 157 YILAG 161 (169)
Q Consensus 157 ~~~~~ 161 (169)
|.+..
T Consensus 75 Y~C~a 79 (95)
T 2ckn_A 75 YACVT 79 (95)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76653
No 419
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.15 E-value=1.4e-06 Score=60.19 Aligned_cols=36 Identities=28% Similarity=0.451 Sum_probs=30.5
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEecc
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEP 77 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~ 77 (169)
.|.|.++..+|+|.|.|.+.|. +.....+.|.|..|
T Consensus 177 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 177 VISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred EEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 8999999999999999999998 66666677766644
No 420
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.15 E-value=5.8e-06 Score=51.98 Aligned_cols=57 Identities=23% Similarity=0.363 Sum_probs=38.6
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
...|.|+|+.....+.. ....+.|+..........+.|.|.+++.+|+|.|.|.+.+
T Consensus 31 ~~~v~W~r~~~~~~~~~---~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 31 LSSTTWYRTQLGSTNEK---TISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp CCEEEEEEEETTCCCCE---ECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCEEEEEEeCCCCCceE---eeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 35799998742211110 1123468775443344677999999999999999999987
No 421
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.15 E-value=2.5e-06 Score=55.13 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=30.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~Rf~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~~~ 101 (126)
T 2h32_A 65 PPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 101 (126)
T ss_dssp CTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CCCEEEEEeCCCCeEEEEECCCChhHCEEEEEEEEcC
Confidence 4689866533456789999999999999999999876
No 422
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.15 E-value=8.6e-06 Score=49.50 Aligned_cols=74 Identities=8% Similarity=0.013 Sum_probs=46.7
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceeeE
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEATY 157 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (169)
+.+...+....+.+|+.+.|.|.+ +. |.+.+.|++++.++..+......... ....+. +.....+|.+.|
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~--p~~~v~W~k~~~~l~~~~~~~~~~~~-~~~~L~------I~~v~~~D~G~Y 78 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ER--AGVKVRWQRGGSDISASNKYGLATEG-TRHTLT------VREVGPADQGSY 78 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SS--SSCCCEEECSSSEECSSTTCEEEEET-TEEEEE------ESSCCTTCCSEE
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CC--CCCeEEEEECCEECCCCCcEEEEEcC-CEEEEE------EcCCCcccCEEE
Confidence 344445667889999999999999 54 56799999999988755432221111 111122 334556677777
Q ss_pred EEee
Q psy1826 158 ILAG 161 (169)
Q Consensus 158 ~~~~ 161 (169)
.+..
T Consensus 79 ~C~a 82 (95)
T 2k1m_A 79 AVIA 82 (95)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 423
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.14 E-value=3.9e-06 Score=53.75 Aligned_cols=71 Identities=21% Similarity=0.288 Sum_probs=43.3
Q ss_pred CcEEEEEEcCceeEEEEcc--eee---cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEe
Q psy1826 3 LAQISWVRHRDIHLLTVSG--YTY---TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~--~~~---~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v~ 75 (169)
...|.|+++....+..... ... .-..|+.+...++ +|.|.+++.+|+|.|.|.+.+.. .....+.|.|.
T Consensus 34 ~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~----sL~I~nv~~~DsG~Y~c~v~~~~~~~~~~~~~L~V~ 109 (121)
T 2edo_A 34 YKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSG----ALYISKVQKEDNSTYIMRVLKKTGNEQEWKIKLQVL 109 (121)
T ss_dssp EEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTC----CEEESSCCGGGCSEEEEEEEETTTEEEECCEECEEE
T ss_pred eeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCc----eEEEeCCCHHHCeEEEEEEEcCCCcEEEEEEEEEEE
Confidence 3578999976422222211 000 1124666432444 89999999999999999998652 23344566666
Q ss_pred cc
Q psy1826 76 EP 77 (169)
Q Consensus 76 ~~ 77 (169)
.+
T Consensus 110 ~~ 111 (121)
T 2edo_A 110 DP 111 (121)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 424
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.14 E-value=6.8e-06 Score=52.05 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=39.4
Q ss_pred CcEEEEEEcCcee---EE-EEc--ceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 3 LAQISWVRHRDIH---LL-TVS--GYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~-~~~--~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
+..|.|+|+.... .+ ... ........|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 30 ~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 30 SYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDSAVYFCAMRG 95 (116)
T ss_dssp SCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEc
Confidence 3579999975322 11 111 011112478886533345678999999999999999999976
No 425
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=98.14 E-value=5.7e-06 Score=52.20 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 99 (114)
T 1sjv_A 64 KGRFTISRDNAKKTVYLEMNSLEPEDTAVYYCYTHY 99 (114)
T ss_dssp TTCEEEEECTTTCCEEEEECSCCGGGCSEEEEEECC
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEeEEc
Confidence 468886654445678999999999999999999876
No 426
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.13 E-value=7.4e-06 Score=53.25 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=35.9
Q ss_pred eccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 75 VEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 75 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
..+|.+...+....+.+|+.+.|.|.+.+.| .|.+.|++++..+
T Consensus 19 ~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P--~p~i~W~k~~~~~ 62 (137)
T 3qr2_A 19 SHMAGFVQAPLSQQRWVGGSVELHCEAVGSP--VPEIQWWFEGQGP 62 (137)
T ss_dssp --CCEEEECCCCEEEETTSCEEEEEEEECSS--CCEEEEEEEESST
T ss_pred CCCCeEEcCCCCEEEeCCCCEEEEEEEeeec--CCeEEEEECCCCc
Confidence 4577878778889999999999999999964 5699999977654
No 427
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=98.13 E-value=9.3e-06 Score=51.80 Aligned_cols=37 Identities=14% Similarity=0.190 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (121)
T 1j05_H 65 QGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 101 (121)
T ss_dssp BTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEBT
T ss_pred CCcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 3688865443346779999999999999999998764
No 428
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.13 E-value=5.4e-06 Score=52.51 Aligned_cols=37 Identities=16% Similarity=0.258 Sum_probs=29.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 100 (116)
T 1a2y_B 64 KSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD 100 (116)
T ss_dssp GGGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESS
T ss_pred CCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 3688865543346789999999999999999999764
No 429
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB: 2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A 1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Probab=98.13 E-value=7.3e-06 Score=52.88 Aligned_cols=37 Identities=19% Similarity=0.347 Sum_probs=29.9
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (127)
T 2x1q_A 65 KGRFTFSRDNAKNLLYLEMLSLEPEDTAVYYCAASSR 101 (127)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CCcEEEEEeCCCCEEEEEEcCCCHHHCEEEEEEEEec
Confidence 4688866543346789999999999999999998763
No 430
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=98.12 E-value=7.6e-06 Score=52.11 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=29.8
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 101 (120)
T 1n4x_H 65 KGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 101 (120)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESS
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcc
Confidence 4688866543346789999999999999999999764
No 431
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.12 E-value=1.4e-05 Score=55.68 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=31.9
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccce
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPIT 79 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 79 (169)
.|.|.+++.+|+|.|.|.+.|. +.....+.|.|...|.
T Consensus 172 ~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 172 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred EEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 7999999999999999999998 7777888888887765
No 432
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.12 E-value=1.2e-05 Score=55.76 Aligned_cols=47 Identities=17% Similarity=0.212 Sum_probs=38.9
Q ss_pred eccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 75 VEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 75 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
..+|.+...+.+..+.+|+.+.|.|.+.+. |.+.+.|++++..+...
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~--p~~~v~W~k~~~~~~~~ 50 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGD--PRPKIVWNKKGKKVSNQ 50 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEE--SCCEEEEEETTEECCCT
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeC--CCCEEEEEECCcCCCCC
Confidence 346777777778889999999999999986 45699999999987654
No 433
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.12 E-value=9e-06 Score=52.60 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=32.5
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCC-CCCCeeEEEECC
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSP-EPPPAIYWLHNT 117 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p-~p~~~i~W~~~~ 117 (169)
+.++..+.++.+.+|+.+.|.|.+.+.+ .|.|.|.|+++.
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk 48 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGK 48 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESS
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCc
Confidence 4566667889999999999999998742 267799999974
No 434
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.11 E-value=8.8e-06 Score=50.89 Aligned_cols=60 Identities=17% Similarity=0.243 Sum_probs=38.7
Q ss_pred cEEEEEEcCcee-EEEEccee--ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDIH-LLTVSGYT--YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~~-~~~~~~~~--~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|.|+|+.... .+-..... .....|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 32 ~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 94 (109)
T 1pew_A 32 NYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDA 94 (109)
T ss_dssp SCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEEEEEEEeC
Confidence 578999976211 11111000 0124688865434456789999999999999999999774
No 435
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.11 E-value=8e-06 Score=50.29 Aligned_cols=74 Identities=16% Similarity=0.181 Sum_probs=47.2
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEAT 156 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (169)
+|.+...+.++.+.+|+.+.|.|.+ +. |.+.+.|++++..+..+....... ......+. +.....+|.+.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~-~~--p~~~v~W~k~~~~l~~~~~~~~~~-~~~~~~L~------I~~v~~~D~G~ 77 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCKT-EH--PAATVTWRKGLLELRASGKHQPSQ-EGLTLRLT------ISALEKADSDT 77 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEEC-SS--CCSCCEEEESSCBCCSSSSEEEEE-ETTEEEEE------EESCCTTTCSE
T ss_pred CCEeEecCCcEEEeCCCcEEEEEEe-CC--CCCeEEEEeCCEECCCCCeEEEEe-CCCEEEEE------ECCCCcccCEE
Confidence 4555555678899999999999994 64 456999999998876554222111 01111122 44556667777
Q ss_pred EEEe
Q psy1826 157 YILA 160 (169)
Q Consensus 157 ~~~~ 160 (169)
|.+.
T Consensus 78 Y~C~ 81 (103)
T 2dku_A 78 YTCD 81 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 436
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.10 E-value=1.4e-05 Score=50.47 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=29.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+...
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 101 (115)
T 2atp_B 65 KKRNIILESSDSRRPFLSIMNVKPEDSDFYFCATVGS 101 (115)
T ss_dssp TTCCEEEESTTSSSCEEEECSCCGGGCEEEEEEEECS
T ss_pred cCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEeEccC
Confidence 4788866533345679999999999999999998753
No 437
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.10 E-value=4.8e-06 Score=51.68 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=48.4
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeeceee
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEAT 156 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (169)
+|.+...+.++.+.+|+.+.|.|.+.+.| .+ +.|++++..+..+........ .....+. +.....+|.+.
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~--~~-v~W~k~g~~~~~~~~~~~~~~-~~~~~L~------I~~v~~~D~G~ 77 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEK--VT-GKWYKNGVEVRPSKRITISHV-GRFHKLV------IDDVRPEDEGD 77 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSS--CE-EEEEESSCBCCCCSSCEEEEE-TTEEEEE------ESSCCTTTCSC
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCC--cc-eEEEcCCEECcCCCCEEEEEe-CCEEEEE------ECCCCcCCCEE
Confidence 45566667788999999999999999853 44 999999988765443222111 1111122 34555667777
Q ss_pred EEEee
Q psy1826 157 YILAG 161 (169)
Q Consensus 157 ~~~~~ 161 (169)
|.+..
T Consensus 78 Y~C~a 82 (106)
T 2dlt_A 78 YTFVP 82 (106)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 438
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.10 E-value=2.2e-05 Score=54.39 Aligned_cols=45 Identities=22% Similarity=0.426 Sum_probs=38.1
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeec
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQL 122 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 122 (169)
.+|.+...+....+.+|+.+.|.|.+.+. |.+.+.|++++..+..
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~--p~~~v~W~~~~~~~~~ 49 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGD--PPPSIVWRKNGKKVSG 49 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECS--SCCEEEEEETTEECCT
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccC--CCCeEEEEECCEECCC
Confidence 46777777788899999999999999986 4569999999998863
No 439
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.10 E-value=2e-05 Score=48.59 Aligned_cols=42 Identities=17% Similarity=0.298 Sum_probs=32.4
Q ss_pred eccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCE
Q psy1826 75 VEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTE 118 (169)
Q Consensus 75 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~ 118 (169)
..+|.++..+.++.+.+|+.+.|.|.+.+.| .+.+.|++++.
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~--~~~v~W~~~~~ 45 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQND--NTSLQWSNPAQ 45 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCS--SCCEEEECTTC
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCC--ccEEEEEcCCC
Confidence 3455666677889999999999999999964 56999999775
No 440
>1xiw_D Immunoglobulin heavy chain variable region; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy3_B
Probab=98.10 E-value=9.2e-06 Score=51.93 Aligned_cols=36 Identities=14% Similarity=0.209 Sum_probs=29.6
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 100 (122)
T 1xiw_D 65 KDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSG 100 (122)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCHHHCEEEEEEEec
Confidence 468886654334678999999999999999999876
No 441
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.10 E-value=1.4e-05 Score=49.95 Aligned_cols=58 Identities=24% Similarity=0.360 Sum_probs=37.5
Q ss_pred cEEEEEEcCcee---EEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDIH---LLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|.|+|+.... .+-...... ....|+.+... ...+.|.|.+++.+|+|.|.|.+.+.
T Consensus 33 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 33 NYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGS--GTDFTFTISSLQPEDIATYYCQQYDN 95 (109)
T ss_dssp TCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecc--CCEEEEEECCCChhhCEEEEEEEeeC
Confidence 468999975211 111111000 12468875432 35678999999999999999999875
No 442
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta sandwich, immunoglobulin fold, protein-protein heterocomplex; 1.50A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Probab=98.09 E-value=9.6e-06 Score=52.90 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=30.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~Rf~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~~~ 101 (134)
T 1zvh_A 65 KGRFTVSLDNAENTVYLQMNSLKPEDTALYYCAAARQ 101 (134)
T ss_dssp BTTBEEEEETTTTEEEEEECSCCGGGCEEEEEEEEES
T ss_pred CCcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 3688876554457889999999999999999998764
No 443
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich, immunoglobulin fold, protein-protein hetero C alpha-beta orthogonal bundle, immune system-hydrolase compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Probab=98.09 E-value=1.3e-05 Score=52.49 Aligned_cols=37 Identities=19% Similarity=0.354 Sum_probs=29.4
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 101 (137)
T 1rjc_A 65 QGRLTISLDNAKNTLYLQMNSLKPEDTAMYYCAADTS 101 (137)
T ss_dssp TTTEEEEEEC--CEEEEEECSCCGGGCEEEEEEECCT
T ss_pred CCcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 4689876554457789999999999999999998763
No 444
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.09 E-value=1.3e-05 Score=54.22 Aligned_cols=59 Identities=20% Similarity=0.425 Sum_probs=41.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
..|.|+|++. .+. .+.++....... .|.|.++..+|+|.|.|.+.|. +.....+.|.|.
T Consensus 128 ~~v~W~~~g~--~~~-------~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 128 PAISWFRNGK--LIE-------ENEKYILKGSNT----ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CEEEEEETTE--ECC-------CSSSEEEETTTT----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CeEEEEECCE--ECc-------CCCcEEEecCCC----EEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 3689998863 211 223444333334 8999999999999999999998 666666666664
No 445
>3k74_B Nanobody; immunoglobulin, antibiotic resista methotrexate resistance, NADP, one-carbon metabolism, oxidoreductase, trimethoprim resistance; 1.95A {Lama glama}
Probab=98.09 E-value=1.2e-05 Score=50.86 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=30.3
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 63 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 98 (115)
T 3k74_B 63 KGRFTISRDNAKNTLYLQMNSLTSEDTAVYYCAKDW 98 (115)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEST
T ss_pred cccEEEEEcCCCCEEEEEECCCChHhCEEEEEEEEc
Confidence 579987665545688999999999999999999876
No 446
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.08 E-value=2.5e-06 Score=69.66 Aligned_cols=87 Identities=17% Similarity=0.249 Sum_probs=40.0
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-----ceEEEEEEEecc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-----IGISMYLSVVEP 77 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-----~~~~~~l~v~~~ 77 (169)
..|.|++++.. +.. ..+.|. +...+ .|.|.+++.+|+|.|.|.+.+. +. ......|+|.++
T Consensus 562 a~v~W~~~~~~--l~~-----~~~~~~--~~~~~----~LlI~~v~~~DsG~Y~C~A~e~~~~~~~~~~~~~~~l~V~v~ 628 (663)
T 1olz_A 562 ARVFWKFQNGV--LKA-----ESPKYG--LMGRK----NLLIFNLSEGDSGVYQCLSEERVKNKTVFQVVAKHVLEVKVV 628 (663)
T ss_dssp CEEEEEESSSB--CCC-----CSSSBC--CTTTT----CEEECSCCGGGCEEEEEEEEEECSSSEEEEEEEEEEEEEEC-
T ss_pred CcEEEEECCee--ccc-----cCcceE--EecCC----eEEEEecCcccCeEEEEEEEECccCCCceEEEEEEEEEEEeC
Confidence 57899998752 111 011111 22234 8999999999999999999886 22 235667888888
Q ss_pred ceeeecCCc-EEEcCCCcEEEEEEeec
Q psy1826 78 ITQIIGGPD-MYINKGSTMNLTCVIKH 103 (169)
Q Consensus 78 p~~~~~~~~-~~v~~g~~~~l~C~~~~ 103 (169)
|.+...+.+ ..+.+|..+.++|.+..
T Consensus 629 P~~~~~p~~~~~~~~g~~~~~~~~~~~ 655 (663)
T 1olz_A 629 PKPVVAPTLSVVQTEGSRIATKVLVAS 655 (663)
T ss_dssp ---------------------------
T ss_pred CccCCCCCChhhhhcCCceEEEeeccc
Confidence 887766543 66789999999998854
No 447
>1zvy_A Immunoglobulin heavy chain antibody variable DOMA; beta sandwich, immunoglobulin fold, protein protein heteroco alpha-beta orthogonal bundle, hydrolase-immune system compl; 1.63A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.08 E-value=9.3e-06 Score=53.15 Aligned_cols=61 Identities=16% Similarity=0.346 Sum_probs=40.4
Q ss_pred CcEEEEEEcCcee---EE-EEcc---e-ee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIH---LL-TVSG---Y-TY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~-~~~~---~-~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.... .+ .... . .. ....|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 101 (136)
T 1zvy_A 31 IEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRK 101 (136)
T ss_dssp CCEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECSS
T ss_pred CcEEEEEEECCCCCCEEEEEEeCCCCceeeCcccCCcEEEEEcCCCCEEEEEECCCChhHCEEEEEEEEeC
Confidence 4679999975321 11 1110 0 01 124799866543346789999999999999999998763
No 448
>3k1k_C Enhancer; nanobody, antibody-complex, chromophore, luminescence, photoprotein, luminescent protein/immune system complex; HET: GYS; 2.15A {Lama pacos} SCOP: b.1.1.1 PDB: 3miq_E* 3ogo_E*
Probab=98.08 E-value=1.6e-05 Score=51.11 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=30.2
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 67 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~Ca~~~ 102 (123)
T 3k1k_C 67 KGRFTISRDDARNTVYLQMNSLKPEDTAVYYCNVNV 102 (123)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEES
T ss_pred cccEEEEEeCCCCEEEEEECCCChhhCEEEEEEEec
Confidence 469987665545788999999999999999999876
No 449
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.08 E-value=1.2e-05 Score=50.11 Aligned_cols=58 Identities=29% Similarity=0.447 Sum_probs=37.6
Q ss_pred cEEEEEEcCcee---EEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDIH---LLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|.|+|+.... .+-...... ....|+.+.. . .+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~-~~~~~L~I~~v~~~DsG~Y~C~~~n~ 93 (108)
T 1jhl_L 31 KSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSG-S-GTDFTLTISSLEPEDFAMYICQQHNE 93 (108)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-S-SSEEEEEECSCCTTCCSEEEEEECSS
T ss_pred ceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEe-c-CCEEEEEECCCCHHHCEEEEEEEccC
Confidence 469999975211 111110000 1246887543 2 35678999999999999999999886
No 450
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.08 E-value=2.5e-05 Score=53.09 Aligned_cols=66 Identities=27% Similarity=0.398 Sum_probs=43.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCC-CCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQ-KRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
..|.|+|.+.+..+... ..+.|+..... .....|.|.++. .+|+|.|.|.+.|. +.....+.|.|.
T Consensus 122 p~i~W~~~~~g~~~~~~----~~~~~~~~~~~--~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 122 PEWMWRKKENGVFEEIS----NSSGRFFIINK--ENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp CEEEEEEEETTEEEECC----CTTSCEEEEEC--SSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CceEEEEcCCCceeeee----cCCCeEEEecC--CCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 37899984222233211 13456664332 234479999999 69999999999998 666666676664
No 451
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.07 E-value=2.2e-05 Score=48.04 Aligned_cols=75 Identities=11% Similarity=0.111 Sum_probs=47.6
Q ss_pred cceeeecCCc-EEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEeeecee
Q psy1826 77 PITQIIGGPD-MYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELTWKLEA 155 (169)
Q Consensus 77 ~p~~~~~~~~-~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (169)
+|.+...+.+ ..+.+|+.+.|.|.+. . |.|.+.|++++..+..+........ .....+. +.....+|.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~--p~~~v~W~k~g~~i~~~~~~~~~~~-~~~~~L~------I~~~~~~D~G 76 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-D--PKLEVKWYKNGQEIRPSTKYIFEHK-GCQRILF------INNCQMTDDS 76 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-C--TTSCEEEEESSCBCCCBTTEEEEEE-TTEEEEE------EEEECTTTCC
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-C--CCceEEEEECCEECCCCCCEEEEec-CCEEEEE------EcCCCcCcCE
Confidence 4555555554 6788999999999997 4 5679999999988765432222111 1111122 4455667777
Q ss_pred eEEEee
Q psy1826 156 TYILAG 161 (169)
Q Consensus 156 ~~~~~~ 161 (169)
.|.+..
T Consensus 77 ~Y~C~a 82 (100)
T 2yuv_A 77 EYYVTA 82 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777654
No 452
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.07 E-value=5.5e-06 Score=51.03 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=39.9
Q ss_pred EEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 6 ISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 6 V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
|.|+|++. .+. .+.|+.+.. ++ ....|.|.+++.+|+|.|.|.+ +.....+.|.|..+|.
T Consensus 39 v~W~k~~~-~l~--------~~~~~~~~~-~~-~~~~L~I~~v~~~D~G~Y~C~~---g~~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 39 VKWCYGNN-VLR--------PGDKYSLRQ-EG-AMLELVVRNLRPQDSGRYSCSF---GDQTTSATLTVTALPS 98 (103)
T ss_dssp CEEEESSS-BCC--------CSSSEEEEE-CS-SEEEEEECSCCTTTCCCEEEEC---SSCBCCBCEEEECCCC
T ss_pred eEEEECCE-ECC--------CCCcEEEEE-cC-CEEEEEEccCCcccCEEEEEEE---CCcEEEEEEEEEeccc
Confidence 88999764 121 224666432 32 4557999999999999999983 3334456777776664
No 453
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.07 E-value=8.1e-06 Score=52.20 Aligned_cols=86 Identities=13% Similarity=0.049 Sum_probs=49.4
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCC-CCCCeeEEEECCE-EeecccccceeecceeeE-EEEEEEEeeEEEEeeece
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSP-EPPPAIYWLHNTE-VSQLNLMQRESESSSFVK-RLVVLLSVSIVELTWKLE 154 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p-~p~~~i~W~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 154 (169)
+.++..+.++.+.+|+.+.|.|.+.+.+ .|.|.|+|+++.. ++.............+.. .......-.+..+..+|.
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 92 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDR 92 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTC
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhC
Confidence 3456667789999999999999998853 2677999999742 222111111110000000 000111223666777888
Q ss_pred eeEEEeeee
Q psy1826 155 ATYILAGTY 163 (169)
Q Consensus 155 ~~~~~~~~~ 163 (169)
+.|++...-
T Consensus 93 G~Y~Cevsn 101 (118)
T 2edn_A 93 GYYRLEVKA 101 (118)
T ss_dssp SCEEEEEEC
T ss_pred EEEEEEEEE
Confidence 888886543
No 454
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=98.06 E-value=8.8e-06 Score=52.46 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=29.9
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (127)
T 1mqk_H 65 KGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCVRHEY 101 (127)
T ss_dssp BTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 4688866543346789999999999999999998763
No 455
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=6.7e-06 Score=50.64 Aligned_cols=62 Identities=19% Similarity=0.206 Sum_probs=40.6
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPPIGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 79 (169)
..|.|+|++.. +. .+.|+.+... .....|.|.+++.+|+|.|.|. .+.....+.|.|...|.
T Consensus 37 ~~v~W~k~~~~-l~--------~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~---~g~~~~~~~l~V~~~p~ 98 (103)
T 2dku_A 37 ATVTWRKGLLE-LR--------ASGKHQPSQE--GLTLRLTISALEKADSDTYTCD---IGQAQSRAQLLVQGRRS 98 (103)
T ss_dssp SCCEEEESSCB-CC--------SSSSEEEEEE--TTEEEEEEESCCTTTCSEEEEE---CSSCBCCEEEEEECSCC
T ss_pred CeEEEEeCCEE-CC--------CCCeEEEEeC--CCEEEEEECCCCcccCEEEEEE---eCCceEEEEEEEeCccC
Confidence 36889998741 11 2246654322 2455799999999999999998 33344456777776543
No 456
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.06 E-value=3.8e-06 Score=55.27 Aligned_cols=32 Identities=19% Similarity=0.485 Sum_probs=28.0
Q ss_pred CCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECC
Q psy1826 84 GPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNT 117 (169)
Q Consensus 84 ~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~ 117 (169)
+..+.+.+|+.+.|.|.+.|. |.|.++|++++
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~--P~P~i~W~k~g 56 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGD--PAPTVIWQKAI 56 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSB--SCCEEEEEEEC
T ss_pred CCCEEEeCCCeEEEEEEEEEc--CCCeEEEEECC
Confidence 456889999999999999996 45699999988
No 457
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.06 E-value=2.5e-06 Score=52.05 Aligned_cols=44 Identities=23% Similarity=0.486 Sum_probs=34.6
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
|.+...+....+.+|+.+.|.|.+.+. |.|.+.|++++.++...
T Consensus 11 ~~i~~~p~~~~v~~G~~v~l~C~~~g~--p~~~v~W~k~~~~~~~~ 54 (96)
T 2ens_A 11 VQLVVEPEGGAVAPGGTVTLTCEVPAQ--PSPQIHWMKDGVPLPLP 54 (96)
T ss_dssp CCCEEESTTSEECTTCEEEEECCCSSC--SSCCCCCEESSSBCSSC
T ss_pred CEEEECCCCCEEcCCCeEEEEEEEccC--CCCEEEEEECCEECcCC
Confidence 344555667789999999999999886 45699999998877644
No 458
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.06 E-value=1.3e-05 Score=51.34 Aligned_cols=57 Identities=19% Similarity=0.326 Sum_probs=39.2
Q ss_pred CcEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 3 LAQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 3 ~~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
...|.|+|+.....+.. .+..+.|+..........+.|.|.+++.+|+|.|.|.+..
T Consensus 31 ~~~v~Wyrq~~g~~~~~---~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (121)
T 2i24_N 31 LSTGYWYRKPPGSRNEE---SISDGGRYVETVNRGSKSFSLRINDLTVKDSGTYRCKPES 87 (121)
T ss_dssp EEEEEEEEECTTCSCCE---EECSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCEEEEEEeCCCCCcee---eEecCCCeEEEecCCCCEEEEEECCCChhhCEEEEEEEec
Confidence 35799999753221110 1123478875444445778999999999999999999864
No 459
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.06 E-value=2.5e-05 Score=53.31 Aligned_cols=45 Identities=20% Similarity=0.438 Sum_probs=38.1
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEee-cCCCCCCeeEEEECCEEeecc
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIK-HSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~-~~p~p~~~i~W~~~~~~~~~~ 123 (169)
+|.++..+....+.+|+.+.|.|.+. +. |.+.+.|++++.++...
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~--p~~~v~W~~~g~~l~~~ 47 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQG--EPPEVHWLRDGQILELA 47 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEES--SCCCCEEEETTEECCSC
T ss_pred CCeeccChhheEEecCCcEEEecccccCC--CCcEEEEEECCEEcccC
Confidence 45667777889999999999999999 75 45699999999988765
No 460
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.05 E-value=2.4e-05 Score=48.39 Aligned_cols=33 Identities=18% Similarity=0.383 Sum_probs=27.4
Q ss_pred cCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 90 NKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 90 ~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
..+..+.|.|.+.|.| .|.++|+++|.++..+.
T Consensus 14 ~~~~~~~~~c~v~G~P--~P~i~W~k~g~~l~~~~ 46 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNP--KPALQWFYNGAILNESK 46 (103)
T ss_dssp CCCCEEEEEEEEECSS--CCEEEEEETTEEECCCS
T ss_pred eECcEEEEEEEEEEeC--CCEEEEEECCEECCCCC
Confidence 3577889999999964 56999999999987654
No 461
>1jtp_A Single-domain antibody; immunoglobulin, heavy chain antibody, VHH, interface, binding, antibody, hydrolase; 1.90A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1jto_A 1mel_A 2x89_A
Probab=98.05 E-value=2.1e-05 Score=52.18 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=30.3
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 65 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 100 (148)
T 1jtp_A 65 KGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADS 100 (148)
T ss_dssp TTTEEEEECCTTSEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCcEEEEEcCCCCEEEEEECcCChhHCEEEEEEEEc
Confidence 469987655445788999999999999999999876
No 462
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.05 E-value=9e-06 Score=50.97 Aligned_cols=59 Identities=24% Similarity=0.362 Sum_probs=38.2
Q ss_pred CcEEEEEEcCcee---EEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIH---LLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.... .+-...... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 34 ~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 34 VGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGS--RTDFTLIIDPVEADDVATYYCQQTNE 97 (111)
T ss_dssp EECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEcc--CCEEEEEECCCCcccCEEEEEEEecC
Confidence 4579999974211 111111111 12468885432 35678999999999999999999874
No 463
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.05 E-value=3.5e-05 Score=52.49 Aligned_cols=46 Identities=13% Similarity=0.216 Sum_probs=38.2
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
.+|.+...+....+.+|+.+.|.|.+.+. |.+.+.|++++.++...
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~--p~~~v~W~~~~~~~~~~ 48 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGH--PKPIVKWYRQGKEIIAD 48 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECS--SCCEEEEEETTEECCCC
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeec--CCCEEEEEECCEECccC
Confidence 35666666778899999999999999986 45799999999988754
No 464
>1smo_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immune system receptor, system; HET: TLA; 1.47A {Homo sapiens} SCOP: b.1.1.1
Probab=98.04 E-value=2.4e-05 Score=49.98 Aligned_cols=51 Identities=20% Similarity=0.199 Sum_probs=35.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCC-c---eEEEEEEEecc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPP-I---GISMYLSVVEP 77 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~-~---~~~~~l~v~~~ 77 (169)
+.|+.+......+.+.|.|.+++.+|+|.|.|.+..... . ...+.|.|...
T Consensus 62 ~~Rfs~~~~~~~~~~~LtI~~l~~~Dsg~Y~C~~~~~~~~~~~~~~~v~L~V~~~ 116 (119)
T 1smo_A 62 VGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKG 116 (119)
T ss_dssp ETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSCCEECSCEEEEEC---
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCCcceEEEEEEEEEECC
Confidence 379987655556888999999999999999999876521 1 13455555433
No 465
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.04 E-value=2.2e-05 Score=49.64 Aligned_cols=49 Identities=22% Similarity=0.308 Sum_probs=32.5
Q ss_pred EEEEeccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 71 YLSVVEPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 71 ~l~v~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.|.|..+|.+..... .. ......|.|.+.|. |.|.+.|+++|..+..+.
T Consensus 2 ~L~V~~pP~i~~~~~-~~--~~~~~~l~C~~~g~--P~p~i~W~k~g~~l~~~~ 50 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEE-PE--LRLEHCIEFVVRGN--PPPTLHWLHNGQPLRESK 50 (118)
T ss_dssp --CCCCCCCCCCCCC-CC--CCCEEEEEEEEECS--SCCEEEEEETTEECCCSS
T ss_pred EEEEecCCceeccCC-Ce--eccceEEEEEeeee--CCCeEEEEECCEECCCCC
Confidence 456667776444322 11 22556889999996 456999999999987654
No 466
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.04 E-value=1.6e-05 Score=49.87 Aligned_cols=59 Identities=22% Similarity=0.291 Sum_probs=38.2
Q ss_pred CcEEEEEEcCcee---EEEE-cce-eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEE
Q psy1826 3 LAQISWVRHRDIH---LLTV-SGY-TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVS 61 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~~-~~~-~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 61 (169)
...|.|+|+.... .+-. ... ......|+.+......+.+.|.|.+++.+|+|.|.|.+.
T Consensus 29 ~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~ 92 (112)
T 2z35_A 29 YPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSAVYYCALS 92 (112)
T ss_dssp CCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCSEEEEEEE
T ss_pred CCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 3579999975321 1111 100 001246888654444567789999999999999999987
No 467
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.04 E-value=1e-05 Score=50.97 Aligned_cols=59 Identities=27% Similarity=0.363 Sum_probs=38.5
Q ss_pred CcEEEEEEcCcee---EEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIH---LLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.... .+-...... ....|+.+... ...+.|.|.+++.+|+|.|.|.+.+.
T Consensus 36 ~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 36 KNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGS--GTDFTLTISSLQAEDVAVYYCQQYYS 99 (114)
T ss_dssp EECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeec--CCEEEEEECCCCcccCEEEEEEEeeC
Confidence 3679999975211 111111000 12468885432 35678999999999999999999875
No 468
>3tpk_A Immunoglobulin heavy chain antibody variable DOMA; immunoglobulin heavy chain domains, VHH, complementarity DET regions, CDR, oligomer-specific; 1.30A {Camelidae} PDB: 3ln9_A* 1zv5_A
Probab=98.04 E-value=2e-05 Score=51.61 Aligned_cols=37 Identities=22% Similarity=0.403 Sum_probs=30.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 69 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 105 (136)
T 3tpk_A 69 KGRFTISQDNAKNTVYLQMNNLKPEDTAMYYCAAAPT 105 (136)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESC
T ss_pred CCCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEEeC
Confidence 4799876655456889999999999999999998763
No 469
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=98.04 E-value=2.1e-05 Score=51.41 Aligned_cols=48 Identities=23% Similarity=0.301 Sum_probs=34.8
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEec
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSVVE 76 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v~~ 76 (169)
..|+.+... .+.+.|.|.+++.+|+|.|.|.+.+.. .......|.|..
T Consensus 64 ~~Rf~~~~~--~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~fg~GT~L~V~~ 113 (137)
T 3bdb_A 64 DSRFSMTVN--DQKFDLNIIGAREDDGGEYFCGEVEGIIIKFTSGTRLQFEG 113 (137)
T ss_dssp CTTEEEEES--SSBEEEEEESCCSTTCEEEEEEEECSSCEEEEEEEEECCCC
T ss_pred CCcEEEEec--CCEEEEEECCCCHHHCEEEEEEEccCCeEEECCCEEEEEEC
Confidence 578886543 467899999999999999999998752 233444555543
No 470
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.03 E-value=1.4e-05 Score=61.95 Aligned_cols=65 Identities=23% Similarity=0.400 Sum_probs=44.4
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEeccc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVVEPI 78 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~~~p 78 (169)
-.|.|++.++ ...... ....|+. ...++ .|.|.+++.+|+|.|+|.|.|. +.....+.+.|..+|
T Consensus 370 p~i~W~~~~~-~~~~~~----~~~~~~~-~~~~~----~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~~~v~~~~ 435 (440)
T 3zyj_A 370 TSVSWITPNG-TVMTHG----AYKVRIA-VLSDG----TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTGTH 435 (440)
T ss_dssp SEEEEECTTS-CEEESS----SCCSSEE-ECTTC----CEEESSCCSTTCEEEEEEEECSSCEEEEEEEEEEC---
T ss_pred CceEEEeCCC-ceeecc----CCCceEE-EccCC----eEEEccCChhhCEEEEEEEEcCCCcEEEEEEEEEeccc
Confidence 4689998654 232211 1124665 34445 7999999999999999999998 777777888777654
No 471
>2frg_P TREM-like transcript-1; immunoglobulin-like, beta-sandwich, cell surface receptor, triggering receptor, platelet receptor, ITIM, immune system; 1.19A {Homo sapiens}
Probab=98.03 E-value=3.8e-05 Score=47.94 Aligned_cols=58 Identities=19% Similarity=0.164 Sum_probs=38.6
Q ss_pred cEEEEEEcCceeEEEEcce-----eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDIHLLTVSGY-----TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~-----~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..+.|+|+..+. +..... ......|+.+.. +..+.+.|.|.+++.+|+|.|.|.+...
T Consensus 28 ~~~~Wyrq~~g~-~~~li~~~~~~~~~~~~R~s~~~-~~~~~~~L~I~~l~~~Dsg~Y~C~~~~~ 90 (106)
T 2frg_P 28 AQKVWCRFLPEG-CQPLVSSAVDRRAPAGRRTFLTD-LGGGLLQVEMVTLQEEDAGEYGCMVDGA 90 (106)
T ss_dssp SEEEEEEEETTE-EEEEEECCBTCEEEETTTEEEEE-EETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CcEEEEECCCCC-CcEEEEeCCcEeeecCCCEEEEc-CCCCEEEEEEccCCHHHCEEEEEEeecC
Confidence 457899875432 111110 112357888532 2356789999999999999999998765
No 472
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.03 E-value=1e-05 Score=55.75 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=40.3
Q ss_pred cEEEEEEcCc-eeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CCc--eEEEEEEEe
Q psy1826 4 AQISWVRHRD-IHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PPI--GISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~--~~~~~l~v~ 75 (169)
..|.|+|++. .............+.++....... .|.|.++..+|+|.|.|.+.|. +.. +..+.|.|.
T Consensus 135 ~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 135 SEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSG----DLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp CEEEEEETTEESBC-----CBSCSSSCEEECTTTC----CEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred CEEEEEeCCcccccccccccccccCceeEecCCCc----eEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 4789999874 222211111111123444222233 7999999999999999999998 555 344555554
No 473
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1; 1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Probab=98.02 E-value=1.3e-05 Score=51.60 Aligned_cols=37 Identities=24% Similarity=0.439 Sum_probs=30.1
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 70 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 106 (127)
T 1i3u_A 70 KGRFAVSRDNAKNTVNLQMNSLKPEDTAVYYCAAKTT 106 (127)
T ss_dssp BTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESC
T ss_pred CCeEEEEEcCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 4689866543346789999999999999999998764
No 474
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.02 E-value=1.3e-05 Score=51.51 Aligned_cols=72 Identities=24% Similarity=0.309 Sum_probs=43.8
Q ss_pred CcEEEEEEcCce---eEEEEccee--ecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEe
Q psy1826 3 LAQISWVRHRDI---HLLTVSGYT--YTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP--PIGISMYLSVV 75 (169)
Q Consensus 3 ~~~V~W~k~~~~---~~~~~~~~~--~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~v~ 75 (169)
...|.|+|+... ..+-..... .....|+.+... ...+.|.|.+++.+|+|.|.|.+.+.. .......|.|.
T Consensus 34 ~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~--~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~ 111 (126)
T 4ffy_L 34 NSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGS--ETDFTLTIDSVETDDAATYYCQQNNEDPYTFGGGTKLEIK 111 (126)
T ss_dssp EECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred CceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecC--CCEEEEEECCCCHHHCEEEEEEEecCCCcEECCCEEEEEe
Confidence 457999996421 111111110 112468875432 467799999999999999999998752 12333455554
Q ss_pred c
Q psy1826 76 E 76 (169)
Q Consensus 76 ~ 76 (169)
.
T Consensus 112 ~ 112 (126)
T 4ffy_L 112 G 112 (126)
T ss_dssp C
T ss_pred c
Confidence 3
No 475
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.02 E-value=1.4e-05 Score=50.26 Aligned_cols=59 Identities=27% Similarity=0.372 Sum_probs=38.6
Q ss_pred CcEEEEEEcCcee---EEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIH---LLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.... .+-...... ....|+.+... ...+.|.|.+++.+|+|.|.|.+.+.
T Consensus 35 ~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 35 NTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGS--GTDFTLKISRVEAEDLGVYFCSQSTH 98 (113)
T ss_dssp CBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEECSCCGGGCEEEEEEECSS
T ss_pred CceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEcc--CCEEEEEECCCChHHCEEEEEEEecC
Confidence 4679999875321 121111111 12468885432 35678999999999999999999774
No 476
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.02 E-value=1.2e-05 Score=49.92 Aligned_cols=49 Identities=20% Similarity=0.403 Sum_probs=33.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|.|+|++. .+.. ...|+.+.... ....|.|.+++.+|+|.|.|.+.+
T Consensus 45 ~~v~W~k~g~--~l~~------~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~~ 93 (104)
T 1pd6_A 45 AEVKWLKNGQ--EIQM------SGSKYIFESIG--AKRTLTISQCSLADDAAYQCVVGG 93 (104)
T ss_dssp SCCEEEESSS--EECC------CSSSSEEEEET--TEEEEEECSCSSSSCEEEEEEETT
T ss_pred CEEEEEECCE--ECCC------CCCeEEEEecC--CEEEEEECCCCcccCEEEEEEECC
Confidence 4689999874 2221 11455533221 345899999999999999999944
No 477
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.02 E-value=8.9e-06 Score=51.83 Aligned_cols=59 Identities=24% Similarity=0.251 Sum_probs=38.5
Q ss_pred CcEEEEEEcCcee---EEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIH---LLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...|.|+|+.... .+-...... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 32 ~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~--~~~~~L~I~~~~~~DsG~Y~C~~~~~ 95 (120)
T 1oaq_L 32 SNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLI--GNKAALTITGAQTEDEAIYFCALWYS 95 (120)
T ss_dssp GGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEE--TTEEEEEEESCCGGGCEEEEEEEEET
T ss_pred CCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecC--CCeEEEEECCCChhhCeEEEEEEccC
Confidence 4579999864321 111111111 12468886542 35778999999999999999998775
No 478
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.01 E-value=2.8e-05 Score=54.09 Aligned_cols=45 Identities=20% Similarity=0.404 Sum_probs=36.4
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+|.+ ..+..+.+.+|+.+.|.|.+.+.| .|.+.|+++|..+....
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p--~p~i~W~~~g~~l~~~~ 63 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYP--SATISWFRDGQLLPSSN 63 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEES--CCEEEEEETTEESSCSS
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecC--CCEEEEEECCeECCCCC
Confidence 4444 456678899999999999999964 56999999999887654
No 479
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.01 E-value=8e-06 Score=56.28 Aligned_cols=63 Identities=22% Similarity=0.401 Sum_probs=40.5
Q ss_pred cEEEEEEcCceeEEEEcceeecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC-CC-ceEEEEEEEeccce
Q psy1826 4 AQISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT-PP-IGISMYLSVVEPIT 79 (169)
Q Consensus 4 ~~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~-~~~~~~l~v~~~p~ 79 (169)
..|.|++++. .+ ..+.++....... .|.|.++..+|+|.|.|.+.|. +. .+..+.|.|..+|.
T Consensus 139 p~i~W~~~g~--~l-------~~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 139 ANIQWLFNSQ--SL-------QLTERMTLSQNNS----ILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp CEEEEEETTE--EC-------CCCSSEEEETTTT----EEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred CceEEEECCE--eC-------CCCCCeEEcCCCC----EEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 3789999763 22 1224555433334 8999999999999999999998 43 33445665555543
No 480
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.00 E-value=3.1e-05 Score=52.17 Aligned_cols=77 Identities=13% Similarity=0.161 Sum_probs=46.7
Q ss_pred ceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEee-EEEEeeeceee
Q psy1826 78 ITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVS-IVELTWKLEAT 156 (169)
Q Consensus 78 p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 156 (169)
|.+...+....+.+|+.+.|.|.+.+. |.+.+.|++++..+................ ..| +.....+|.+.
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~--p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~------~~L~i~~~~~~d~G~ 74 (182)
T 1rhf_A 3 LKLMGAPVKLTVSQGQPVKLNCSVEGM--EEPDIQWVKDGAVVQNLDQLYIPVSEQHWI------GFLSLKSVERSDAGR 74 (182)
T ss_dssp ----CCCEEEEEETTCCEEEEEEEESC--SSCCEEEEETTEECCSSEEEEEEEETTEEE------EEEEESSCCGGGCEE
T ss_pred CEEEeCCcceEEeCCCcEEEEEEEeCC--CCCeEEEEECCeecCCCCceEEEecCCCce------EEEEEeecCcccCeE
Confidence 344555667889999999999999985 566999999999887653222221111111 112 33455567777
Q ss_pred EEEeee
Q psy1826 157 YILAGT 162 (169)
Q Consensus 157 ~~~~~~ 162 (169)
|.+...
T Consensus 75 Y~C~~~ 80 (182)
T 1rhf_A 75 YWCQVE 80 (182)
T ss_dssp EEEEES
T ss_pred EEEEEE
Confidence 766543
No 481
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.00 E-value=1.1e-05 Score=50.25 Aligned_cols=58 Identities=24% Similarity=0.417 Sum_probs=37.7
Q ss_pred cEEEEEEcCce---eEEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDI---HLLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|.|+|+... ..+-...... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 31 DDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGT--GTDFVFTIENTLSEDVGDYYCLQSFN 93 (107)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEcc--CCEEEEEECCCCHHHCEEEEEEEeeC
Confidence 46999997421 1121111110 12468885432 35678999999999999999999875
No 482
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=98.00 E-value=1.7e-05 Score=51.08 Aligned_cols=36 Identities=19% Similarity=0.395 Sum_probs=29.5
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+.+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 100 (127)
T 3cx5_J 65 KDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSE 100 (127)
T ss_dssp TTTBCCEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 468876554445778999999999999999999876
No 483
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=97.99 E-value=9.2e-05 Score=60.96 Aligned_cols=45 Identities=13% Similarity=0.202 Sum_probs=33.8
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeE-EE--ECCEEeecc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIY-WL--HNTEVSQLN 123 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~-W~--~~~~~~~~~ 123 (169)
.+|.+. .+.+..+.+|+.+.|.|.+.|.| .|.+. |+ ++|.++...
T Consensus 164 ~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P--~p~i~~W~~~~~g~~l~~~ 211 (731)
T 2v5y_A 164 RTPHFL-RIQNVEVNAGQFATFQCSAIGRT--VAGDRLWLQGIDVRDAPLK 211 (731)
T ss_dssp SSCEEC-CCCCEEEETTSCEEEEEEEESCC--CTTCEEEEEESSSCCEEEE
T ss_pred cccccc-cccceEEeCCCcEEEEEEeCCCC--CCceeEEEecCCCcccccc
Confidence 345544 55678899999999999999975 45777 88 678776543
No 484
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=97.99 E-value=1.9e-05 Score=50.02 Aligned_cols=36 Identities=11% Similarity=0.243 Sum_probs=30.0
Q ss_pred CcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEe
Q psy1826 85 PDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVS 120 (169)
Q Consensus 85 ~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 120 (169)
..+.+.+|+.+.|.|.+.+.|.|.+.+.|++++..+
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~ 51 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 51 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTC
T ss_pred CCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCccc
Confidence 445788999999999999976667899999987643
No 485
>2vyr_E Human single domain antibody; zinc, complex, nucleus, human MDM4, immune system, zinc-finger, polymorphism, metal-binding; 2.00A {Homo sapiens} PDB: 1igm_H 2a9n_H* 2a9m_H
Probab=97.98 E-value=1.9e-05 Score=52.77 Aligned_cols=37 Identities=19% Similarity=0.331 Sum_probs=30.7
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+...
T Consensus 65 ~~Rfs~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~~~~~ 101 (153)
T 2vyr_E 65 KGRFTISRDNSKNTLYLQMNSLRTEDTAVYYCAKPWY 101 (153)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSS
T ss_pred CCcEEEEEcCCCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 4699876654457889999999999999999998653
No 486
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=97.98 E-value=1.9e-06 Score=54.99 Aligned_cols=66 Identities=20% Similarity=0.256 Sum_probs=42.0
Q ss_pred EEEEEEcCceeEEEEcceeecCCCCeEEEecCCCC--eEEEEEcCCCCCCC-eEEEEEEEcC-CCceEEEEEEEecc
Q psy1826 5 QISWVRHRDIHLLTVSGYTYTSDQRFSCIHKPQNE--DWTLQIKYPQKRDS-GIYECQVSTT-PPIGISMYLSVVEP 77 (169)
Q Consensus 5 ~V~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--~~~L~I~~v~~~D~-G~Y~C~~~~~-~~~~~~~~l~v~~~ 77 (169)
.|.|++++.. +... .+.|+......... ...|.|.+++.+|+ |.|.|.+.|. +.....+.|.|..+
T Consensus 45 ~i~W~~~~~~-l~~~------~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~~ 114 (122)
T 2cry_A 45 RIAWSWKENV-LESG------TSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGS 114 (122)
T ss_dssp EEEEESSSCE-ECSE------EETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEEEECCCCSCS
T ss_pred EeEEEECCEE-ccCC------CCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEEEEEEEECCC
Confidence 4899988742 2110 11455432111011 34799999999999 9999999998 76666666666544
No 487
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=97.98 E-value=2.4e-05 Score=49.86 Aligned_cols=70 Identities=21% Similarity=0.333 Sum_probs=42.4
Q ss_pred cEEEEEEcCcee---EEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCC---CceEEEEEEEe
Q psy1826 4 AQISWVRHRDIH---LLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTP---PIGISMYLSVV 75 (169)
Q Consensus 4 ~~V~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~---~~~~~~~l~v~ 75 (169)
..|.|+|+.... .+-...... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+.. .......|.|.
T Consensus 31 ~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~fg~gt~L~V~ 108 (120)
T 1mqk_L 31 SYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGS--GTQFSLKINSLLPEDFGSYYCQHHYGTPPLTFGGGTKLEIK 108 (120)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCEEEEEEECSSSSSCCBCCCEEEEEC
T ss_pred ceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEecc--CCEEEEEECCCCHHHCEEEEEEEEeCCCceEECCCeEEEEe
Confidence 468999964211 111111000 12468885432 356789999999999999999998753 23334455553
No 488
>3nn8_A Engineered SCFV, heavy chain; beta barrel, antibody fragment, immunoglobulin, immune syste; 3.10A {Mus musculus}
Probab=97.98 E-value=4.3e-05 Score=48.84 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=30.3
Q ss_pred CCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 27 DQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 27 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
..|+.+......+.+.|.|.+++.+|+|.|.|.+..
T Consensus 66 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 101 (122)
T 3nn8_A 66 KSRATLTVDKTSSTVYLELRSLTSEDSSVYYCARRG 101 (122)
T ss_dssp TTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 478887665445788999999999999999999875
No 489
>3k81_A Single strand antibody VHH domain; krepa6, single domain antibody, immune system, RNA BIND protein; 3.40A {Lama glama}
Probab=97.97 E-value=3.3e-05 Score=49.96 Aligned_cols=60 Identities=15% Similarity=0.287 Sum_probs=40.5
Q ss_pred CcEEEEEEcCceeE---E-EEcce-----eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 3 LAQISWVRHRDIHL---L-TVSGY-----TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 3 ~~~V~W~k~~~~~~---~-~~~~~-----~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
...+.|+|+.+... + ..... .-....|+.+......+.+.|.|.+++.+|+|.|.|.+..
T Consensus 31 ~~~v~WyrQ~pg~~~~~L~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~Dsg~Y~Ca~~~ 99 (127)
T 3k81_A 31 SEAWGWYRRAPGKQRELIAAINNEGRTNYVDSVKGRFTVSRDNAKNVMYLQMNSLKPEDTAVYYCNANL 99 (127)
T ss_dssp SSCEEEEEECSSSCEEEEEEECSSCCEEECTTTTTTCEEEEETTTTEEEEEEESBCTTTCEEEEEECCC
T ss_pred CcEEEEEEECCCCCCEEEEEEECCCceEcCCcccCCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEee
Confidence 45799999753221 1 11111 0113578987665545788999999999999999998865
No 490
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=97.97 E-value=1.9e-05 Score=50.32 Aligned_cols=58 Identities=24% Similarity=0.394 Sum_probs=37.8
Q ss_pred cEEEEEEcCce---eEEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 4 AQISWVRHRDI---HLLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 4 ~~V~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
..|.|+|+... ..+-...... ....|+.+... .+.+.|.|.+++.+|+|.|.|.+.+.
T Consensus 33 ~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 33 KKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGS--GRDYSFSISNLEPEDAATYYCLQYDN 95 (119)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE--TTEEEEEECSCCGGGCEEEEEEECGG
T ss_pred ceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcc--CCEEEEEECCCChHHCEEEEEEEccC
Confidence 46899997521 1111111011 12468885432 35678999999999999999999875
No 491
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=97.96 E-value=5.9e-05 Score=51.15 Aligned_cols=47 Identities=21% Similarity=0.232 Sum_probs=38.5
Q ss_pred ccceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 76 EPITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 76 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
.+|.+...+....+.+|+.+.|.|.+.+. |.+.+.|++++..+....
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~--p~~~v~W~~~~~~~~~~~ 52 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGR--PLPDIKWYRFGKELIQSR 52 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEEEEE--SCCEEEEEETTEEECCCS
T ss_pred CCCcccccCCceEEeCCCcEEEEEEEecC--CCCEEEEEECCEECCCCc
Confidence 45666666778899999999999999885 456999999999886543
No 492
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=97.96 E-value=2.7e-05 Score=52.88 Aligned_cols=46 Identities=20% Similarity=0.269 Sum_probs=37.5
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeeccc
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNL 124 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 124 (169)
+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+....
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p--~~~v~W~~~~~~~~~~~ 50 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFP--VPEVSWFRDGQVISTST 50 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEES--CCEEEEEESSSBCCTTT
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecC--CCEEEEEECCEEccccc
Confidence 56666667788999999999999998864 56999999998876553
No 493
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.96 E-value=1.1e-05 Score=54.33 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=30.1
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC--CCceEEEEEEEeccce
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT--PPIGISMYLSVVEPIT 79 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~--~~~~~~~~l~v~~~p~ 79 (169)
.|.|.++..+|+|.|.|.+.|. ...+..+.|.|..+|.
T Consensus 135 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 135 NISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred eEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 8999999999999999999985 3344456777776653
No 494
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=97.96 E-value=1.6e-05 Score=52.73 Aligned_cols=73 Identities=22% Similarity=0.346 Sum_probs=43.7
Q ss_pred cEEEEEEcCce---eEEEEcceee--cCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcCCC--ceEEEEEEEec
Q psy1826 4 AQISWVRHRDI---HLLTVSGYTY--TSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTTPP--IGISMYLSVVE 76 (169)
Q Consensus 4 ~~V~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~--~~~~~~l~v~~ 76 (169)
..|.|+|+... ..+-...... ....|+.+... ...+.|.|.+++.+|+|.|.|.+.+... ......|.|..
T Consensus 46 ~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~--~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~fg~GT~L~V~~ 123 (146)
T 2yc1_B 46 SYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGS--GTDFTLTISSLEPEDFAIYYCQQYRYSPRTFGQGTKVEIKR 123 (146)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE--TTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecC--CCEEEEEECCCCHHHCEEEEEEEecCCCCeECCCEEEEEeC
Confidence 46899997532 1221111111 12468886432 3567899999999999999999987521 23345666654
Q ss_pred cc
Q psy1826 77 PI 78 (169)
Q Consensus 77 ~p 78 (169)
++
T Consensus 124 ~~ 125 (146)
T 2yc1_B 124 AA 125 (146)
T ss_dssp --
T ss_pred Cc
Confidence 43
No 495
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=97.95 E-value=1.5e-05 Score=47.97 Aligned_cols=22 Identities=23% Similarity=0.459 Sum_probs=21.2
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
.|.|.+++.+|+|.|.|.+.|.
T Consensus 51 ~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 51 LYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp EEEESSCCGGGCEEEEEEEECS
T ss_pred eEEECCCCHHhCEEEEEEEEcC
Confidence 8999999999999999999997
No 496
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=97.95 E-value=7.4e-06 Score=56.49 Aligned_cols=45 Identities=24% Similarity=0.512 Sum_probs=37.3
Q ss_pred cceeeecCCcEEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecc
Q psy1826 77 PITQIIGGPDMYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLN 123 (169)
Q Consensus 77 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~ 123 (169)
+|.+...+..+.+.+|+.+.|.|.+.+. |.+.+.|++++..+...
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~--p~~~v~W~~~~~~~~~~ 53 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGR--PTPTIEWYKGGERVETD 53 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEE--SCCEEEEEETTEECCCT
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCC--CCCEEEEEECCEEeecc
Confidence 5666666778899999999999999886 45699999999987654
No 497
>3k3q_A Llama AA1 VHH domain; llama, VHH, antibody, BONT, cell junction, cell membrane, cytoplasm, disulfide bond, hydrolase; 2.60A {Lama glama} SCOP: b.1.1.0
Probab=97.95 E-value=6.8e-05 Score=49.95 Aligned_cols=60 Identities=18% Similarity=0.254 Sum_probs=40.8
Q ss_pred CcEEEEEEcCceeE---E-EEcc-e-----eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy1826 3 LAQISWVRHRDIHL---L-TVSG-Y-----TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVST 62 (169)
Q Consensus 3 ~~~V~W~k~~~~~~---~-~~~~-~-----~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 62 (169)
...+.|+|+.++.. + .... . .-....||.+........+.|.|.+++.+|+|.|.|.+..
T Consensus 45 ~~~v~WyrQ~pg~~p~~L~~~~~~~~~~~~~~~~~~Rfs~s~~~s~~~~sL~I~~lq~~Dsg~YyCa~~~ 114 (151)
T 3k3q_A 45 AGAMGWFRQAPGKDREFVAAISPRTDETYYAESLEGRFSVSRDAAATMVFLQADNVRLDDTASYYCAADE 114 (151)
T ss_dssp CCEEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTCEEEECTTSSEEEEEESSCCSTTCEEEEEEEET
T ss_pred CeeEEEEEECCCCCcEEEEEEeCCCCceecCCccCCCEEEEecCCCCEEEEEECCCccccCEEEEEEEec
Confidence 46799999753221 1 1111 0 1123579987665445788999999999999999999875
No 498
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=97.95 E-value=3.2e-05 Score=52.70 Aligned_cols=34 Identities=29% Similarity=0.342 Sum_probs=29.0
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC-CCceEEEEEEEe
Q psy1826 42 TLQIKYPQKRDSGIYECQVSTT-PPIGISMYLSVV 75 (169)
Q Consensus 42 ~L~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~v~ 75 (169)
.|.|.++..+|+|.|.|.+.|. +.....+.|.|.
T Consensus 166 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 166 VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 8999999999999999999997 666666676664
No 499
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.95 E-value=4.9e-05 Score=47.41 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=47.9
Q ss_pred EeccceeeecCCc---EEEcCCCcEEEEEEeecCCCCCCeeEEEECCEEeecccccceeecceeeEEEEEEEEeeEEEEe
Q psy1826 74 VVEPITQIIGGPD---MYINKGSTMNLTCVIKHSPEPPPAIYWLHNTEVSQLNLMQRESESSSFVKRLVVLLSVSIVELT 150 (169)
Q Consensus 74 v~~~p~~~~~~~~---~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (169)
|..+|..+..+.. +.+.+|+.+.|.|.+. . |.+.+.|++++..+..+........ .....+. +....
T Consensus 7 v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~--p~~~v~W~k~g~~~~~~~~~~~~~~-~~~~~L~------I~~v~ 76 (113)
T 2cpc_A 7 GTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-R--PWAEVRWTKDGEEVVESPALLLQKE-DTVRRLV------LPAVQ 76 (113)
T ss_dssp CCSCSCSEEESCSCEEEEEETTCCEEEEEEES-C--TTCCCEEEETTEECCCBTTBEEEEC-SSEEEEE------ESSCC
T ss_pred cccCCcEEEccCCceeEEEEcCCeEEEEEEec-C--CCCeEEEEECCEECccCCCEEEEEC-CCEEEEE------ECCCC
Confidence 3455655554443 6788999999999984 3 5679999999998876543322211 1111122 33455
Q ss_pred eeceeeEEEee
Q psy1826 151 WKLEATYILAG 161 (169)
Q Consensus 151 ~~~~~~~~~~~ 161 (169)
.+|.+.|.+..
T Consensus 77 ~~D~G~Y~C~a 87 (113)
T 2cpc_A 77 LEDSGEYLCEI 87 (113)
T ss_dssp TTTCEEEEEES
T ss_pred cccCEEEEEEE
Confidence 66777776653
No 500
>3eak_A NBBCII10-FGLA; antibody, nanobody, humanization, VHH domain, immune system; 1.95A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.95 E-value=2.5e-05 Score=51.22 Aligned_cols=61 Identities=15% Similarity=0.269 Sum_probs=40.3
Q ss_pred CcEEEEEEcCceeE---E-EEc-ce-----eecCCCCeEEEecCCCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy1826 3 LAQISWVRHRDIHL---L-TVS-GY-----TYTSDQRFSCIHKPQNEDWTLQIKYPQKRDSGIYECQVSTT 63 (169)
Q Consensus 3 ~~~V~W~k~~~~~~---~-~~~-~~-----~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 63 (169)
...+.|+|+.+... + ... .. .-....||.+........+.|.|.+++.+|+|.|.|.+...
T Consensus 34 ~~~v~WyrQ~pg~~~~~L~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~Dsg~YyCa~~~~ 104 (137)
T 3eak_A 34 TFSLGWFRQAPGQGLEAVAAIASMGGLTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAVRG 104 (137)
T ss_dssp GSEEEEEEECTTSCEEEEEEECTTTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESS
T ss_pred CcEEEEEEECCCCCCEEEEEEecCCCceecCCccCCCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 35799999753221 2 111 10 01134788866544346789999999999999999998764
Done!