Query psy1827
Match_columns 148
No_of_seqs 162 out of 1022
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 17:24:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1827.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1827hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v26_A Myosin VI; calmodulin-b 100.0 1.8E-36 6.2E-41 263.7 4.5 123 24-147 401-533 (784)
2 1lkx_A Myosin IE heavy chain; 100.0 3.3E-36 1.1E-40 259.3 4.5 118 24-147 350-467 (697)
3 4anj_A Unconventional myosin-V 100.0 1.2E-35 3.9E-40 264.4 5.0 124 23-147 404-537 (1052)
4 1w7j_A Myosin VA; motor protei 100.0 2.8E-35 9.5E-40 256.5 4.9 117 24-147 401-517 (795)
5 4db1_A Myosin-7; S1DC, cardiac 100.0 2.5E-35 8.5E-40 256.1 4.4 118 23-147 424-542 (783)
6 1w9i_A Myosin II heavy chain; 100.0 3.2E-35 1.1E-39 255.0 5.0 118 23-147 418-537 (770)
7 1kk8_A Myosin heavy chain, str 100.0 9.6E-35 3.3E-39 254.2 4.5 118 23-147 423-541 (837)
8 2ycu_A Non muscle myosin 2C, a 100.0 2E-34 6.7E-39 256.4 4.8 120 23-147 395-517 (995)
9 2dfs_A Myosin-5A; myosin-V, in 100.0 2.6E-34 8.7E-39 257.3 4.5 117 24-147 401-517 (1080)
10 1g8x_A Myosin II heavy chain f 100.0 5.2E-34 1.8E-38 253.8 5.4 118 23-147 418-537 (1010)
11 1i84_S Smooth muscle myosin he 100.0 5.8E-34 2E-38 257.4 3.3 119 24-147 411-548 (1184)
12 3l6a_A Eukaryotic translation 97.5 4.6E-05 1.6E-09 61.3 3.6 64 1-74 169-232 (364)
13 1ug3_A EIF4GI, eukaryotic prot 97.4 8.5E-05 2.9E-09 58.9 3.8 64 1-68 172-237 (339)
14 1w9i_A Myosin II heavy chain; 81.1 0.23 7.8E-06 43.5 -0.8 83 11-98 386-474 (770)
15 1w7j_A Myosin VA; motor protei 81.1 0.18 6.3E-06 44.2 -1.4 79 12-98 369-457 (795)
16 4db1_A Myosin-7; S1DC, cardiac 81.1 0.2 6.9E-06 43.9 -1.1 75 11-85 392-472 (783)
17 1lkx_A Myosin IE heavy chain; 80.8 0.26 9E-06 42.6 -0.5 70 23-100 333-408 (697)
18 1i84_S Smooth muscle myosin he 80.0 0.43 1.5E-05 43.5 0.6 29 21-49 424-452 (1184)
19 2dfs_A Myosin-5A; myosin-V, in 78.4 0.32 1.1E-05 44.1 -0.8 80 11-98 368-457 (1080)
20 1kk8_A Myosin heavy chain, str 77.7 0.64 2.2E-05 41.1 0.9 80 11-98 391-480 (837)
21 2ycu_A Non muscle myosin 2C, a 74.7 0.86 3E-05 41.0 1.0 84 11-98 363-453 (995)
22 1g8x_A Myosin II heavy chain f 71.3 0.91 3.1E-05 40.9 0.3 82 12-98 387-474 (1010)
23 2v26_A Myosin VI; calmodulin-b 45.5 7.6 0.00026 34.0 1.5 27 21-47 414-440 (784)
24 4anj_A Unconventional myosin-V 38.3 11 0.00039 34.1 1.5 28 21-48 418-445 (1052)
25 2bec_B Sodium/hydrogen exchang 37.9 16 0.00056 19.7 1.6 37 27-68 1-37 (43)
26 1y4m_A HERV-FRD_6P24.1 proviru 35.7 8.9 0.0003 21.9 0.3 27 119-145 24-50 (53)
27 1mof_A Moloney murine leukemia 28.5 12 0.00043 21.5 0.1 27 119-145 26-52 (55)
28 3otd_A TRNA(His) guanylyltrans 25.8 53 0.0018 25.0 3.2 67 23-93 137-207 (269)
29 2kw0_A CCMH protein; oxidoredu 21.7 1.4E+02 0.0046 18.8 4.0 32 42-73 45-76 (90)
30 2hl7_A Cytochrome C-type bioge 20.7 1.2E+02 0.0042 18.6 3.6 30 42-71 48-77 (84)
No 1
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=1.8e-36 Score=263.74 Aligned_cols=123 Identities=25% Similarity=0.465 Sum_probs=103.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhc--Cccchhh--------HHHHHHHhhhcCCCcchhhhhhhhccchhHHHHH
Q psy1827 24 ADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKDI--------VADIREIANKHCIPDQELIVLLCINYANEHLQYY 93 (148)
Q Consensus 24 ~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~i--------i~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~~ 93 (148)
+.+.+.+...++...||+|+|+||+++|+ ...+|.. ..+|+||+| ||+|+.|||||||||||||+||++
T Consensus 401 e~i~~~l~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~~~~~IGvLDI~G-FE~f~~NsFEQlcINyaNEkLQq~ 479 (784)
T 2v26_A 401 TVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYFIGVLDIAG-FEYFEHNSFEQFCINYCNEKLQQF 479 (784)
T ss_dssp --CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCSEEEEEEECCC-CCCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccceeeecccCC-cccCCcCCHHHHHHHHHHHHHHHH
Confidence 44555566667777777777777777776 1111111 125669999 999999999999999999999999
Q ss_pred HHHhhHHHHHhhhhccCcceeeccccCcHHHHHhhhcCCCcccccchhhhhccC
Q psy1827 94 FNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKILL 147 (148)
Q Consensus 94 ~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~l~li~~~p~Gll~lLDee~~~p~ 147 (148)
|++++|+.||++|.+|||+|..|+|.||++|+|||+++|+|||+||||||++|+
T Consensus 480 F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslLDEe~~~p~ 533 (784)
T 2v26_A 480 FNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 533 (784)
T ss_dssp HHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSS
T ss_pred HHHhhhhhHHHHHHhcCCCcccccccChHHHHHHHhhccccHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999996
No 2
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=3.3e-36 Score=259.29 Aligned_cols=118 Identities=27% Similarity=0.404 Sum_probs=96.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhhhcCCCcchhhhhhhhccchhHHHHHHHHhhHHHHH
Q psy1827 24 ADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLLCINYANEHLQYYFNQHVFQYEQ 103 (148)
Q Consensus 24 ~~i~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~~~~~~~f~~~~ 103 (148)
|.+++.+|+++|.|+++.+|++|..... ...++ +|+||+| ||+|+.|||||||||||||+||++|++++|+.||
T Consensus 350 dalaK~lY~rLF~wlV~~IN~~l~~~~~-~~~~I----GvLDI~G-FE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~Eq 423 (697)
T 1lkx_A 350 DALAKALYERLFNWLVSKINTIINCTTE-KGPVI----GILDIYG-FEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQ 423 (697)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCSC-CCCEE----EEEECCC-CCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCC-CceeE----Eeecccc-ccccCcCCHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 4444455555555555555544432110 12334 4559999 9999999999999999999999999999999999
Q ss_pred hhhhccCcceeeccccCcHHHHHhhhcCCCcccccchhhhhccC
Q psy1827 104 EEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKILL 147 (148)
Q Consensus 104 ~~y~~Egi~~~~~~~~dn~~~l~li~~~p~Gll~lLDee~~~p~ 147 (148)
++|.+|||+|..|+|.||++|+|||+++|.|||+||||||++|+
T Consensus 424 eeY~~EgI~w~~i~f~dN~~~idLie~kp~GilslLDEec~~p~ 467 (697)
T 1lkx_A 424 EEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAK 467 (697)
T ss_dssp HHHHHTTCCCCCCCCSCCCHHHHHTTSSSSSHHHHHHHHHHSTT
T ss_pred HHHHhcCCcccccCCCCCHHHHHHHhcccCChhhhhHHhhCCCC
Confidence 99999999999999999999999999999999999999999996
No 3
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=1.2e-35 Score=264.37 Aligned_cols=124 Identities=25% Similarity=0.450 Sum_probs=105.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhc--Cccchh--------hHHHHHHHhhhcCCCcchhhhhhhhccchhHHHH
Q psy1827 23 LADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKD--------IVADIREIANKHCIPDQELIVLLCINYANEHLQY 92 (148)
Q Consensus 23 l~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~--------ii~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~ 92 (148)
.+.+.+.+...++...||+|+|+||+++|+ +..+|. ...+|+||+| ||+|+.|||||||||||||+||+
T Consensus 404 ~e~i~~~l~~~qA~~~rDaLAK~LY~rLF~wiV~~IN~~l~~~~~~~~IGILDI~G-FE~f~~NsFEQLCINyaNEkLQq 482 (1052)
T 4anj_A 404 GTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYFIGVLDIAG-FEYFEHNSFEQFCINYCNEKLQQ 482 (1052)
T ss_dssp ----CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCSEEEEEEECCC-CCCCSSCCHHHHHHHHHHHHHHH
T ss_pred ceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccceEEEEecCC-CcccccCcHHHHHHHHHHHHHHH
Confidence 355666667778888888888888888887 111111 1125569999 99999999999999999999999
Q ss_pred HHHHhhHHHHHhhhhccCcceeeccccCcHHHHHhhhcCCCcccccchhhhhccC
Q psy1827 93 YFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKILL 147 (148)
Q Consensus 93 ~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~l~li~~~p~Gll~lLDee~~~p~ 147 (148)
+|++++|+.++++|.+|||+|..|+|.||++|||||+++|+|||++|||||++|+
T Consensus 483 ~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLDEe~~~p~ 537 (1052)
T 4anj_A 483 FFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 537 (1052)
T ss_dssp HHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSS
T ss_pred HHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHHHHcCcccHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999996
No 4
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=2.8e-35 Score=256.49 Aligned_cols=117 Identities=35% Similarity=0.522 Sum_probs=96.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhhhcCCCcchhhhhhhhccchhHHHHHHHHhhHHHHH
Q psy1827 24 ADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLLCINYANEHLQYYFNQHVFQYEQ 103 (148)
Q Consensus 24 ~~i~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~~~~~~~f~~~~ 103 (148)
|.+++.+|+++|.|++..+|++|..... ...++ +|+||+| ||+|+.|||||||||||||+||++|++++|+.||
T Consensus 401 dalaK~lY~rLF~wlV~~IN~~l~~~~~-~~~~I----GvLDI~G-FE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~Eq 474 (795)
T 1w7j_A 401 DALAKHIYANLFNWIVDHVNKALHSTVK-QHSFI----GVLDIYG-FETFEINSFEQFCINYANEKLQQQFNMHVFKLEQ 474 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSSC-CSEEE----EEEECCC-CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcc-ccceE----EeeccCc-ccccCcCCHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 4455555555555555555555542111 12334 4459999 9999999999999999999999999999999999
Q ss_pred hhhhccCcceeeccccCcHHHHHhhhcCCCcccccchhhhhccC
Q psy1827 104 EEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKILL 147 (148)
Q Consensus 104 ~~y~~Egi~~~~~~~~dn~~~l~li~~~p~Gll~lLDee~~~p~ 147 (148)
++|.+|||+|..++|.||++|||||+++ .|||+||||||++|+
T Consensus 475 eeY~~EgI~w~~i~f~DN~~~idLie~~-~GIlslLDEec~~p~ 517 (795)
T 1w7j_A 475 EEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPK 517 (795)
T ss_dssp HHHHHTTCCGGGCCCCCCHHHHHHHHST-TSHHHHHHHHHTSTT
T ss_pred HHHHhcCCcccccCccccHHHHHHHHhc-CCHHHhhhhhccCCC
Confidence 9999999999999999999999999976 999999999999996
No 5
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=2.5e-35 Score=256.15 Aligned_cols=118 Identities=32% Similarity=0.564 Sum_probs=96.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhhhcCCCcchhhhhhhhccchhHHHHHHHHhhHHHH
Q psy1827 23 LADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLLCINYANEHLQYYFNQHVFQYE 102 (148)
Q Consensus 23 l~~i~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~~~~~~~f~~~ 102 (148)
.|.+++.+|+++|.|++..+|++|... .....+++| +||+| ||+|+.|||||||||||||+||++|++++|+.|
T Consensus 424 rdalAK~lY~rLF~wlV~~IN~~l~~~-~~~~~~IGv----LDI~G-FE~f~~NsFEQlCINyaNEkLQq~Fn~~~F~~E 497 (783)
T 4db1_A 424 TGALAKAVYERMFNWMVTRINATLETK-QPRQYFIGV----LDIAG-FEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLE 497 (783)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCS-CCCSEEEEE----EECCC-CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCCceEEE----ecccc-ccccccCCHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 455666666666666666666655532 111234444 49999 999999999999999999999999999999999
Q ss_pred HhhhhccCcceeeccc-cCcHHHHHhhhcCCCcccccchhhhhccC
Q psy1827 103 QEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKILL 147 (148)
Q Consensus 103 ~~~y~~Egi~~~~~~~-~dn~~~l~li~~~p~Gll~lLDee~~~p~ 147 (148)
|++|.+|||+|..++| .||++|||||++ |+|||+||||||++|+
T Consensus 498 qeeY~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~lLDEec~~p~ 542 (783)
T 4db1_A 498 QEEYKKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSILEEECMFPK 542 (783)
T ss_dssp HHHHHHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHHHCC-TTCTT
T ss_pred HHHhhhcCCCcccccccCChHHHHHHHhC-CCchHhhhhHHhcCCC
Confidence 9999999999999999 599999999995 8999999999999996
No 6
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=3.2e-35 Score=254.96 Aligned_cols=118 Identities=34% Similarity=0.533 Sum_probs=97.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhhhcCCCcchhhhhhhhccchhHHHHHHHHhhHHHH
Q psy1827 23 LADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLLCINYANEHLQYYFNQHVFQYE 102 (148)
Q Consensus 23 l~~i~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~~~~~~~f~~~ 102 (148)
.|.+++.+|+++|.|++..+|++|.... ...++ +|+||+| ||+|+.|||||||||||||+||++|++++|+.|
T Consensus 418 rdalaK~lY~rLF~wlV~~IN~~l~~~~--~~~~I----GvLDI~G-FE~F~~NsFEQlCINyaNEkLQq~Fn~~~f~~E 490 (770)
T 1w9i_A 418 RDALVKALYGRLFLWLVKKINNVLCQER--KAYFI----GVLDIYG-FEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLE 490 (770)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSC--CSEEE----EEEECCC-CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCee----eeccCcc-ccccccCCHHHHHHHhhHHHHHHHHHhhhhHHH
Confidence 3555555566666666555555554211 12334 4559999 999999999999999999999999999999999
Q ss_pred HhhhhccCcceeeccc-cCcHHHHHhhhcC-CCcccccchhhhhccC
Q psy1827 103 QEEYNKEGIRWRHIEF-SDNTLCLQLVEGK-PNGLLCVLDDQAKILL 147 (148)
Q Consensus 103 ~~~y~~Egi~~~~~~~-~dn~~~l~li~~~-p~Gll~lLDee~~~p~ 147 (148)
|++|.+|||+|..++| .||++|||||+++ |+|||+||||||++|+
T Consensus 491 qeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~GilslLDEec~~p~ 537 (770)
T 1w9i_A 491 QEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPN 537 (770)
T ss_dssp HHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHHHHHHHHSSSS
T ss_pred HHHhhccCCCceeeccccCcHHHHHHHhCCCCCchhhhhhhhhCCCC
Confidence 9999999999999999 5999999999974 9999999999999996
No 7
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=9.6e-35 Score=254.19 Aligned_cols=118 Identities=33% Similarity=0.590 Sum_probs=97.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhhhcCCCcchhhhhhhhccchhHHHHHHHHhhHHHH
Q psy1827 23 LADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLLCINYANEHLQYYFNQHVFQYE 102 (148)
Q Consensus 23 l~~i~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~~~~~~~f~~~ 102 (148)
.|.+++.+|+++|.|+++.+|++|.... ....+++ |+||+| ||+|+.|||||||||||||+||++|++++|+.|
T Consensus 423 rdalaK~lY~rLF~wlV~~IN~~l~~~~-~~~~~IG----vLDI~G-FE~f~~NsFEQlcINyaNEkLQq~Fn~~~f~~E 496 (837)
T 1kk8_A 423 VGALAKSLYDRMFNWLVRRVNKTLDTKA-KRNYYIG----VLDIAG-FEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 496 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCEEEE----EEECCC-CCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCC-CCcceEE----EEecCC-ccccccccHHHHHHHHhhHHHHHHHHHhhhHHH
Confidence 3555555555555555555555554110 0123444 459999 999999999999999999999999999999999
Q ss_pred HhhhhccCcceeeccc-cCcHHHHHhhhcCCCcccccchhhhhccC
Q psy1827 103 QEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKILL 147 (148)
Q Consensus 103 ~~~y~~Egi~~~~~~~-~dn~~~l~li~~~p~Gll~lLDee~~~p~ 147 (148)
|++|.+|||+|..++| .||++|||||++ |.|||+||||||++|+
T Consensus 497 qeeY~~EgI~w~~i~f~~dn~~~idLiek-p~GIlslLDEec~~p~ 541 (837)
T 1kk8_A 497 QEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPK 541 (837)
T ss_dssp HHHHHHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHHHHHHTTCTT
T ss_pred HHHhhhcCCceeecccccCHHHHHHHHhc-CCcHHHHHHHHhcCCC
Confidence 9999999999999999 599999999996 8999999999999996
No 8
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=2e-34 Score=256.40 Aligned_cols=120 Identities=36% Similarity=0.569 Sum_probs=100.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhhhcCCCcchhhhhhhhccchhHHHHHHHHhhHHHH
Q psy1827 23 LADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLLCINYANEHLQYYFNQHVFQYE 102 (148)
Q Consensus 23 l~~i~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~~~~~~~f~~~ 102 (148)
.|.+++.+|+++|.|++..+|++|.........+++| +|||| ||+|+.|||||||||||||+||++|++++|..+
T Consensus 395 rdalak~lY~~LF~wlV~~iN~~l~~~~~~~~~~Igv----LDI~G-FE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~E 469 (995)
T 2ycu_A 395 LEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGI----LDIAG-FEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLE 469 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCSEEEEE----EECCC-BCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceEEE----ecccc-ccccccchHHHHHHHhhHHHHHHHHHHhhhHHH
Confidence 4566666666666666666666665221111234444 49999 999999999999999999999999999999999
Q ss_pred HhhhhccCcceeeccc-cCcHHHHHhhhc--CCCcccccchhhhhccC
Q psy1827 103 QEEYNKEGIRWRHIEF-SDNTLCLQLVEG--KPNGLLCVLDDQAKILL 147 (148)
Q Consensus 103 ~~~y~~Egi~~~~~~~-~dn~~~l~li~~--~p~Gll~lLDee~~~p~ 147 (148)
+++|.+|||+|..|+| .||++|||||++ +|+|||+||||||++|+
T Consensus 470 qeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil~lLdee~~~p~ 517 (995)
T 2ycu_A 470 QEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPK 517 (995)
T ss_dssp HHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHHHHHHHSSSSTT
T ss_pred HHHHhccCCCccccccccChHHHHHHHhccCCCCchhhhhHHHhcCCC
Confidence 9999999999999999 699999999997 48999999999999996
No 9
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=2.6e-34 Score=257.27 Aligned_cols=117 Identities=35% Similarity=0.522 Sum_probs=95.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhhhcCCCcchhhhhhhhccchhHHHHHHHHhhHHHHH
Q psy1827 24 ADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLLCINYANEHLQYYFNQHVFQYEQ 103 (148)
Q Consensus 24 ~~i~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~~~~~~~f~~~~ 103 (148)
|.+++.+|+++|.|++..+|++|..... ...++ +|+|||| ||+|+.|||||||||||||+||++|++++|..++
T Consensus 401 dalak~lY~~LF~wlV~~iN~~l~~~~~-~~~~I----gvLDI~G-FE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~Eq 474 (1080)
T 2dfs_A 401 DALAKHIYANLFNWIVDHVNKALHSTVK-QHSFI----GVLDIYG-FETFEINSFEQFCINYANEKLQQQFNMHVFKLEQ 474 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSSC-CCEEE----EEEEECC-CCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccc-cCceE----EeeccCC-ccccCcCCHHHHHHHhhhHHHHHHHHHHhhHHHH
Confidence 4455555555555555555554442110 12334 4459999 9999999999999999999999999999999999
Q ss_pred hhhhccCcceeeccccCcHHHHHhhhcCCCcccccchhhhhccC
Q psy1827 104 EEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKILL 147 (148)
Q Consensus 104 ~~y~~Egi~~~~~~~~dn~~~l~li~~~p~Gll~lLDee~~~p~ 147 (148)
++|.+|||+|..++|.||++|||||+++ +|||+||||||++|+
T Consensus 475 eeY~~EgI~w~~i~f~dn~~~idlie~~-~Gil~lLdee~~~p~ 517 (1080)
T 2dfs_A 475 EEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPK 517 (1080)
T ss_dssp HHHHHHTCCTTCCCCCCCHHHHHHHHST-TSHHHHHHHHTTSTT
T ss_pred HHHhhcCCccccccccccHHHHHHHhcC-CceeeeccccccCCC
Confidence 9999999999999999999999999976 999999999999996
No 10
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=5.2e-34 Score=253.75 Aligned_cols=118 Identities=34% Similarity=0.532 Sum_probs=100.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhhhcCCCcchhhhhhhhccchhHHHHHHHHhhHHHH
Q psy1827 23 LADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLLCINYANEHLQYYFNQHVFQYE 102 (148)
Q Consensus 23 l~~i~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~~nE~l~~~~~~~~f~~~ 102 (148)
.|.+++.+|++.|.|++..+|++|.... ...+++| +||+| ||+|+.|||||||||||||+||++|++++|+.+
T Consensus 418 rdalak~lY~~LF~wlV~~IN~~l~~~~--~~~~Igv----LDI~G-FE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~E 490 (1010)
T 1g8x_A 418 RDALVKALYGRLFLWLVKKINNVLCSER--KAYFIGV----LDISG-FEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVE 490 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSS--CSEEEEE----EECCC-CCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC--cCceeee----ccCcc-cccCCcCcHHHHHHHhhhHHHHHHHHHHhhHHH
Confidence 4566666666666666666666665321 2234444 49999 999999999999999999999999999999999
Q ss_pred HhhhhccCcceeeccc-cCcHHHHHhhhc-CCCcccccchhhhhccC
Q psy1827 103 QEEYNKEGIRWRHIEF-SDNTLCLQLVEG-KPNGLLCVLDDQAKILL 147 (148)
Q Consensus 103 ~~~y~~Egi~~~~~~~-~dn~~~l~li~~-~p~Gll~lLDee~~~p~ 147 (148)
+++|.+|||+|..++| .||++|||||++ +|+|||+||||||++|+
T Consensus 491 qeeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~lLdee~~~p~ 537 (1010)
T 1g8x_A 491 QEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPN 537 (1010)
T ss_dssp HHHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHHHHHHHTTSSS
T ss_pred HHHhhccCCCccccccccChHHHHHHHhcCCCCeeehhhhHHhCCCC
Confidence 9999999999999999 599999999997 49999999999999996
No 11
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.98 E-value=5.8e-34 Score=257.41 Aligned_cols=119 Identities=36% Similarity=0.568 Sum_probs=96.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------CccchhhHHHHHHHhhhcCCCcchhhhhhhhccch
Q psy1827 24 ADIVKLHMAQASQEAKKELQEQLEEQISE----------------GASIKDIVADIREIANKHCIPDQELIVLLCINYAN 87 (148)
Q Consensus 24 ~~i~~~l~~~~~~~~rd~L~k~L~~~l~~----------------~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~~n 87 (148)
+.|.+.+...++...||+|+|+||+++|+ ...++ +|+|||| |++|+.||||||||||||
T Consensus 411 e~~~~~~~~~~a~~~rdalak~lY~~lF~wlv~~iN~~l~~~~~~~~~~I----gvLDi~G-FE~f~~NsfeQlciNy~n 485 (1184)
T 1i84_S 411 DVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFL----GILDIAG-FEIFEINSFEQLCINYTN 485 (1184)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC------CEEE----EEEECCC-CCCCSSBCHHHHHHHHHH
T ss_pred ceEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCcceE----EEeecCC-cCCCCcchHHHHHHHHHH
Confidence 34444444555555555555555555554 12334 4559999 999999999999999999
Q ss_pred hHHHHHHHHhhHHHHHhhhhccCcceeeccc-cCcHHHHHhhhcC--CCcccccchhhhhccC
Q psy1827 88 EHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK--PNGLLCVLDDQAKILL 147 (148)
Q Consensus 88 E~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~l~li~~~--p~Gll~lLDee~~~p~ 147 (148)
|+||++|++++|..++++|.+|||+|..|+| .||++|||||+++ |+|||+||||||++|+
T Consensus 486 EkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLdee~~~p~ 548 (1184)
T 1i84_S 486 EKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPK 548 (1184)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHHTTSCTT
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCchhhhhhhhCCCC
Confidence 9999999999999999999999999999999 5999999999962 3499999999999996
No 12
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=97.55 E-value=4.6e-05 Score=61.25 Aligned_cols=64 Identities=20% Similarity=0.256 Sum_probs=52.3
Q ss_pred CCCCCCCCCCHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhhhcCCCc
Q psy1827 1 MEFVPPNKRSDEYFRTVFEEKGLADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPD 74 (148)
Q Consensus 1 ~~~~P~~kr~~~~~~~~f~~~gl~~i~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~e 74 (148)
++|||+++|+.+++.++|+++||+.++. ..++++.|...+.++.+..+|+..|++-.+...+.+
T Consensus 169 ~~FlPe~~~~~~~~~e~~~~~~L~~l~~----------~~~l~~~L~~~l~~~~~~~~i~~wik~n~~~~~~~~ 232 (364)
T 3l6a_A 169 QKMLPEIDQNKDRMLEILEGKGLSFLFP----------LLKLEKELLKQIKLDPSPQTIYKWIKDNISPKLHVD 232 (364)
T ss_dssp GGGSCGGGCSHHHHHHHHHHHTCGGGCH----------HHHHHHHHHHHHHHCCCHHHHHHHHHHHSCHHHHTC
T ss_pred HHhCCccccchhHHHHHHHhCCCcccCC----------HHHHHHHHHHHHHcCCChHHHHHHHHHhCCcccCCC
Confidence 4799999999999999999999998874 247888888888888888888888877776443443
No 13
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=97.44 E-value=8.5e-05 Score=58.93 Aligned_cols=64 Identities=22% Similarity=0.284 Sum_probs=46.4
Q ss_pred CCCCCCCCCCHHHHHHHHHhcCchhHHHHHHHHHHH--HHHHHHHHHHHHHHhcCccchhhHHHHHHHhh
Q psy1827 1 MEFVPPNKRSDEYFRTVFEEKGLADIVKLHMAQASQ--EAKKELQEQLEEQISEGASIKDIVADIREIAN 68 (148)
Q Consensus 1 ~~~~P~~kr~~~~~~~~f~~~gl~~i~~~l~~~~~~--~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g 68 (148)
++|||+|+| ++++|+++||+.++.+..++... ..++++.++|...+.++.+...|+..|++-..
T Consensus 172 ~~f~P~~~~----~~~~~~~~~L~~l~~~~~~~~~~~~~~~~ev~~~L~~~l~~~~~~~~i~~~i~~~~~ 237 (339)
T 1ug3_A 172 KEFLPEGQD----IGAFVAEQKVEYTLGEESEAPGQRALPSEELNRQLEKLLKEGSSNQRVFDWIEANLS 237 (339)
T ss_dssp GGTSCTTCC----HHHHHHHTTCGGGC----------CCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSC
T ss_pred HHhCCCchh----HHHHHHHCCceeecCCcccccccccCCHHHHHHHHHHHHHcCCCHHHHHHHHHhcCC
Confidence 479999998 78999999999999998777765 46789999999999888788888876666554
No 14
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=81.15 E-value=0.23 Score=43.48 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=49.1
Q ss_pred HHHHHHHHHh----cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccchhhHHHHHHHhhhcCCCcchhhhhhhhc
Q psy1827 11 DEYFRTVFEE----KGLADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKDIVADIREIANKHCIPDQELIVLLCIN 84 (148)
Q Consensus 11 ~~~~~~~f~~----~gl~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN 84 (148)
.+.+.+.+.. .|.+.+.+.+...++...||+|+|+||+++|+ ...+|..+..- ....+--+.|.=+||.|-.|
T Consensus 386 ~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~-~~~~~IGvLDI~GFE~F~~N 464 (770)
T 1w9i_A 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQE-RKAYFIGVLDIYGFEIFKVN 464 (770)
T ss_dssp HHHHHHHHHSCEEEETTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS-CCSEEEEEEECCCCCCCSSC
T ss_pred HHHHHHHhhCcEEEeCCeeEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCeeeeccCccccccccC
Confidence 3445555543 45566777788899999999999999999999 23444433100 00000013355577777655
Q ss_pred cchhHHHHHHHHhh
Q psy1827 85 YANEHLQYYFNQHV 98 (148)
Q Consensus 85 ~~nE~l~~~~~~~~ 98 (148)
.+-|++++.+
T Consensus 465 ----sFEQlCINya 474 (770)
T 1w9i_A 465 ----SFEQLCINYT 474 (770)
T ss_dssp ----CHHHHHHHHH
T ss_pred ----CHHHHHHHhh
Confidence 3444444443
No 15
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=81.08 E-value=0.18 Score=44.23 Aligned_cols=79 Identities=9% Similarity=0.012 Sum_probs=48.2
Q ss_pred HHHHHHHHh----cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccchhhHHHHHHHhh----hcCCCcchhhhhh
Q psy1827 12 EYFRTVFEE----KGLADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKDIVADIREIAN----KHCIPDQELIVLL 81 (148)
Q Consensus 12 ~~~~~~f~~----~gl~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~ii~~i~d~~g----~~ei~e~n~~eql 81 (148)
+.+.+.+.. .|.+.+.+.+...++...||+|+|+||+++|+ ...+|..+ +.-. +--+.|.=+||.|
T Consensus 369 ~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l----~~~~~~~~~IGvLDI~GFE~f 444 (795)
T 1w7j_A 369 EEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKAL----HSTVKQHSFIGVLDIYGFETF 444 (795)
T ss_dssp HHHHHHHSEEEEECSSCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSSCCSEEEEEEECCCCCCC
T ss_pred HHHHHHhcccEEEeCCceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCCccccceEEeeccCccccc
Confidence 444455443 45566777788899999999999999999999 23344333 2110 0013355567776
Q ss_pred hhccchhHHHHHHHHhh
Q psy1827 82 CINYANEHLQYYFNQHV 98 (148)
Q Consensus 82 ciN~~nE~l~~~~~~~~ 98 (148)
-.| .+-|++++.+
T Consensus 445 ~~N----sFEQlcINya 457 (795)
T 1w7j_A 445 EIN----SFEQFCINYA 457 (795)
T ss_dssp SSC----CHHHHHHHHH
T ss_pred CcC----CHHHHHHHhh
Confidence 655 3445544443
No 16
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=81.06 E-value=0.2 Score=43.89 Aligned_cols=75 Identities=12% Similarity=-0.021 Sum_probs=42.6
Q ss_pred HHHHHHHHHh----cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccchhhHHHHHHHhhhcCCCcchhhhhhhhc
Q psy1827 11 DEYFRTVFEE----KGLADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKDIVADIREIANKHCIPDQELIVLLCIN 84 (148)
Q Consensus 11 ~~~~~~~f~~----~gl~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN 84 (148)
.+.+.+.+.. .|.+.+.+.+...++...||+|+|+||+++|+ +..+|..+..-.+...+--+.|.-+||.|-.|
T Consensus 392 ~~~L~~aL~~~~i~~~~e~v~~~~~~~qA~~~rdalAK~lY~rLF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f~~N 471 (783)
T 4db1_A 392 SADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYFIGVLDIAGFEIFDFN 471 (783)
T ss_dssp HHHHHHHHHSCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCCSEEEEEEECCCCCCCSSC
T ss_pred HHHHHHhhcceEEEeCCeeEeeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEEeccccccccccC
Confidence 3445555543 45566777788899999999999999999999 33444433100000000013355577777655
Q ss_pred c
Q psy1827 85 Y 85 (148)
Q Consensus 85 ~ 85 (148)
-
T Consensus 472 s 472 (783)
T 4db1_A 472 S 472 (783)
T ss_dssp C
T ss_pred C
Confidence 3
No 17
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=80.76 E-value=0.26 Score=42.61 Aligned_cols=70 Identities=13% Similarity=0.022 Sum_probs=43.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccchhhHHHHHHHhh----hcCCCcchhhhhhhhccchhHHHHHHHH
Q psy1827 23 LADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKDIVADIREIAN----KHCIPDQELIVLLCINYANEHLQYYFNQ 96 (148)
Q Consensus 23 l~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~ii~~i~d~~g----~~ei~e~n~~eqlciN~~nE~l~~~~~~ 96 (148)
.+.+.+.+...++...||+|+|+||+++|+ +..+|..+ +.-. .--+.|.=+||.+-.|- +-|++++
T Consensus 333 ~e~i~~~l~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l----~~~~~~~~~IGvLDI~GFE~f~~Ns----FEQlcIN 404 (697)
T 1lkx_A 333 CSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTII----NCTTEKGPVIGILDIYGFEVFQNNS----FEQLNIN 404 (697)
T ss_dssp --CCCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCSCCCCEEEEEECCCCCCCSSBC----HHHHHHH
T ss_pred CCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCceeEEeeccccccccCcCC----HHHHHHH
Confidence 577888888999999999999999999999 23344433 2110 00123555777776553 4455544
Q ss_pred hhHH
Q psy1827 97 HVFQ 100 (148)
Q Consensus 97 ~~f~ 100 (148)
.+-+
T Consensus 405 y~NE 408 (697)
T 1lkx_A 405 FCNE 408 (697)
T ss_dssp HHHH
T ss_pred hhhh
Confidence 4433
No 18
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=80.03 E-value=0.43 Score=43.52 Aligned_cols=29 Identities=7% Similarity=0.123 Sum_probs=24.9
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1827 21 KGLADIVKLHMAQASQEAKKELQEQLEEQ 49 (148)
Q Consensus 21 ~gl~~i~~~l~~~~~~~~rd~L~k~L~~~ 49 (148)
...|.+++.+|+++|.|++..+|++|...
T Consensus 424 ~~rdalak~lY~~lF~wlv~~iN~~l~~~ 452 (1184)
T 1i84_S 424 FAIEALAKAKFERLFRWILTRVNKALDKT 452 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 45689999999999999999999999753
No 19
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=78.44 E-value=0.32 Score=44.13 Aligned_cols=80 Identities=9% Similarity=-0.007 Sum_probs=46.6
Q ss_pred HHHHHHHHHh----cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccchhhHHHHHHHhh----hcCCCcchhhhh
Q psy1827 11 DEYFRTVFEE----KGLADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKDIVADIREIAN----KHCIPDQELIVL 80 (148)
Q Consensus 11 ~~~~~~~f~~----~gl~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~ii~~i~d~~g----~~ei~e~n~~eq 80 (148)
.+.+.+.+.. .|.+.+.+.+...++...||+|+|+||+++|+ +..+|..+ +.-. +--+.|.-|||.
T Consensus 368 ~~~L~~~l~~~~~~~~~e~i~~~~~~~qa~~~rdalak~lY~~LF~wlV~~iN~~l----~~~~~~~~~IgvLDI~GFE~ 443 (1080)
T 2dfs_A 368 YEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKAL----HSTVKQHSFIGVLDIYGFET 443 (1080)
T ss_dssp HHHHHHHHHEEEECC----EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSSCCCEEEEEEEECCCCC
T ss_pred HHHHHHHhcccEEEeCCceEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----ccccccCceEEeeccCCccc
Confidence 3445555544 45567777888899999999999999999999 23334333 2111 011335557777
Q ss_pred hhhccchhHHHHHHHHhh
Q psy1827 81 LCINYANEHLQYYFNQHV 98 (148)
Q Consensus 81 lciN~~nE~l~~~~~~~~ 98 (148)
|-.|- +-|++++.+
T Consensus 444 f~~Ns----FEQlcINy~ 457 (1080)
T 2dfs_A 444 FEINS----FEQFCINYA 457 (1080)
T ss_dssp CSSBC----HHHHHHHHH
T ss_pred cCcCC----HHHHHHHhh
Confidence 76553 444444433
No 20
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=77.70 E-value=0.64 Score=41.07 Aligned_cols=80 Identities=8% Similarity=0.011 Sum_probs=46.3
Q ss_pred HHHHHHHHHh----cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccchhhHHHHHHHhh----hcCCCcchhhhh
Q psy1827 11 DEYFRTVFEE----KGLADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKDIVADIREIAN----KHCIPDQELIVL 80 (148)
Q Consensus 11 ~~~~~~~f~~----~gl~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~ii~~i~d~~g----~~ei~e~n~~eq 80 (148)
.+.+.+.+.. .|.+.+.+.+...++...||+|+|+||+++|+ ...+|..+ +.-. +--+.|.=+||.
T Consensus 391 ~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l----~~~~~~~~~IGvLDI~GFE~ 466 (837)
T 1kk8_A 391 AGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTL----DTKAKRNYYIGVLDIAGFEI 466 (837)
T ss_dssp HHHHHHHHHSCEEC----CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCCCCCEEEEEEECCCCCC
T ss_pred HHHHHHHhcCcEEEcCCceEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCCCcceEEEEecCCccc
Confidence 3445555543 45566777788899999999999999999999 23444433 2100 001335557777
Q ss_pred hhhccchhHHHHHHHHhh
Q psy1827 81 LCINYANEHLQYYFNQHV 98 (148)
Q Consensus 81 lciN~~nE~l~~~~~~~~ 98 (148)
|-.|- +-|++++.+
T Consensus 467 f~~Ns----FEQlcINya 480 (837)
T 1kk8_A 467 FDFNS----FEQLCINYT 480 (837)
T ss_dssp CSSBC----HHHHHHHHH
T ss_pred ccccc----HHHHHHHHh
Confidence 76553 444444443
No 21
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=74.75 E-value=0.86 Score=40.96 Aligned_cols=84 Identities=12% Similarity=0.012 Sum_probs=49.2
Q ss_pred HHHHHHHHHh----cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccchhhHHHHHH-HhhhcCCCcchhhhhhhh
Q psy1827 11 DEYFRTVFEE----KGLADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKDIVADIRE-IANKHCIPDQELIVLLCI 83 (148)
Q Consensus 11 ~~~~~~~f~~----~gl~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~ii~~i~d-~~g~~ei~e~n~~eqlci 83 (148)
.+.+.+.+.. .|.+.|.+.+...++...||+|+|+||+++|+ +..+|..|..-.. ...+--+.|.=|||.|-.
T Consensus 363 ~~~L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~LF~wlV~~iN~~l~~~~~~~~~~IgvLDI~GFE~f~~ 442 (995)
T 2ycu_A 363 VTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQL 442 (995)
T ss_dssp HHHHHHHHHSCEEESSSSEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCSEEEEEEECCCBCCCSS
T ss_pred HHHHHHHhcCcEEEcCCceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceEEEecccccccccc
Confidence 3445555543 45567777788899999999999999999999 3344443310000 000001335557777765
Q ss_pred ccchhHHHHHHHHhh
Q psy1827 84 NYANEHLQYYFNQHV 98 (148)
Q Consensus 84 N~~nE~l~~~~~~~~ 98 (148)
|- +-|++++.+
T Consensus 443 Ns----fEQlcINy~ 453 (995)
T 2ycu_A 443 NS----FEQLCINYT 453 (995)
T ss_dssp BC----HHHHHHHHH
T ss_pred ch----HHHHHHHhh
Confidence 53 444544443
No 22
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=71.30 E-value=0.91 Score=40.90 Aligned_cols=82 Identities=11% Similarity=0.078 Sum_probs=47.7
Q ss_pred HHHHHHHHh----cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccchhhHHHHHHHhhhcCCCcchhhhhhhhcc
Q psy1827 12 EYFRTVFEE----KGLADIVKLHMAQASQEAKKELQEQLEEQISE--GASIKDIVADIREIANKHCIPDQELIVLLCINY 85 (148)
Q Consensus 12 ~~~~~~f~~----~gl~~i~~~l~~~~~~~~rd~L~k~L~~~l~~--~~~~~~ii~~i~d~~g~~ei~e~n~~eqlciN~ 85 (148)
+.+.+.+.. .|.+.|.+.+...++...||+|+|+||+++|+ +..+|..|.. .....+--+.|.=|||.|-.|-
T Consensus 387 ~~L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~LF~wlV~~IN~~l~~-~~~~~~IgvLDI~GFE~f~~Ns 465 (1010)
T 1g8x_A 387 SVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCS-ERKAYFIGVLDISGFEIFKVNS 465 (1010)
T ss_dssp HHHHHHHHSCEEESSSSEEECCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-SSCSEEEEEEECCCCCCCSSBC
T ss_pred HHHHHHHhCcEEEeCCeeEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcCceeeeccCcccccCCcCc
Confidence 444444443 45566667777889999999999999999999 2344443310 0000001133455777776553
Q ss_pred chhHHHHHHHHhh
Q psy1827 86 ANEHLQYYFNQHV 98 (148)
Q Consensus 86 ~nE~l~~~~~~~~ 98 (148)
+-|++++.+
T Consensus 466 ----fEQlcINy~ 474 (1010)
T 1g8x_A 466 ----FEQLCINYT 474 (1010)
T ss_dssp ----HHHHHHHHH
T ss_pred ----HHHHHHHhh
Confidence 444444443
No 23
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=45.49 E-value=7.6 Score=34.03 Aligned_cols=27 Identities=4% Similarity=0.047 Sum_probs=24.6
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy1827 21 KGLADIVKLHMAQASQEAKKELQEQLE 47 (148)
Q Consensus 21 ~gl~~i~~~l~~~~~~~~rd~L~k~L~ 47 (148)
...|.+++.+|+++|.|+++.+|++|.
T Consensus 414 ~~rdalaK~lY~rLF~wlV~~IN~~l~ 440 (784)
T 2v26_A 414 NARDALAKTVYSHLFDHVVNRVNQCFP 440 (784)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 356999999999999999999999885
No 24
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=38.33 E-value=11 Score=34.09 Aligned_cols=28 Identities=4% Similarity=-0.001 Sum_probs=25.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy1827 21 KGLADIVKLHMAQASQEAKKELQEQLEE 48 (148)
Q Consensus 21 ~gl~~i~~~l~~~~~~~~rd~L~k~L~~ 48 (148)
...|.+++.+|+++|.|+++.+|++|..
T Consensus 418 ~~rDaLAK~LY~rLF~wiV~~IN~~l~~ 445 (1052)
T 4anj_A 418 NARDALAKTVYSHLFDHVVNRVNQCFPF 445 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 4569999999999999999999998864
No 25
>2bec_B Sodium/hydrogen exchanger 1; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} PDB: 2e30_B
Probab=37.86 E-value=16 Score=19.69 Aligned_cols=37 Identities=24% Similarity=0.483 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhHHHHHHHhh
Q psy1827 27 VKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIAN 68 (148)
Q Consensus 27 ~~~l~~~~~~~~rd~L~k~L~~~l~~~~~~~~ii~~i~d~~g 68 (148)
|+|+..+........++..++.++++ -++.+|-|+.|
T Consensus 1 V~~L~Vkr~~~~~~t~~e~ih~~~~d-----hlmaGiEdi~G 37 (43)
T 2bec_B 1 VDLLAVKKKQETKRSINEEIHTQFLD-----HLLTGIEDICG 37 (43)
T ss_dssp -------------CCHHHHHHHHHHH-----HHHHHHHHHHC
T ss_pred CcceeeeccccccccHHHHHhhhhhh-----hhhhchHhhcC
Confidence 45677777777777888888887765 35556667766
No 26
>1y4m_A HERV-FRD_6P24.1 provirus ancestral ENV polyprotei; coat protein, membrane fusion, endogenous retrovirus, membra protein; 1.60A {Homo sapiens} SCOP: h.3.2.1
Probab=35.71 E-value=8.9 Score=21.92 Aligned_cols=27 Identities=19% Similarity=0.322 Sum_probs=22.7
Q ss_pred cCcHHHHHhhhcCCCcccccchhhhhc
Q psy1827 119 SDNTLCLQLVEGKPNGLLCVLDDQAKI 145 (148)
Q Consensus 119 ~dn~~~l~li~~~p~Gll~lLDee~~~ 145 (148)
..|.-.+|++.-+..|+=..|.|+|.|
T Consensus 24 lQNRraLDlL~a~~GG~C~~l~e~CC~ 50 (53)
T 1y4m_A 24 LQNRRGLDMLTAAQGGICLALDEKCCF 50 (53)
T ss_dssp HHHHHHHHHHTGGGTSHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHhCCccHHhcCchhc
Confidence 367788999888888998899999876
No 27
>1mof_A Moloney murine leukemia virus P15; glycoprotein, coat protein, polyprotein, transmembrane, SIGN protein; 1.70A {Moloney murine leukemia virus} SCOP: h.3.2.1
Probab=28.47 E-value=12 Score=21.46 Aligned_cols=27 Identities=26% Similarity=0.290 Sum_probs=22.3
Q ss_pred cCcHHHHHhhhcCCCcccccchhhhhc
Q psy1827 119 SDNTLCLQLVEGKPNGLLCVLDDQAKI 145 (148)
Q Consensus 119 ~dn~~~l~li~~~p~Gll~lLDee~~~ 145 (148)
..|...+|++.-+..|+=..|.|+|.|
T Consensus 26 lQNRraLD~L~a~~GG~C~~l~e~CCf 52 (55)
T 1mof_A 26 LQNRRGLDLLFLKEGGLCAALKEECAF 52 (55)
T ss_dssp HHHHHHHHHHTGGGTCHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHHhCCccHHHcCchhc
Confidence 357788998888888998889999876
No 28
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A
Probab=25.83 E-value=53 Score=24.95 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=43.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHh--cCccchhhHHHHHHHhhhcCCCcch--hhhhhhhccchhHHHHH
Q psy1827 23 LADIVKLHMAQASQEAKKELQEQLEEQIS--EGASIKDIVADIREIANKHCIPDQE--LIVLLCINYANEHLQYY 93 (148)
Q Consensus 23 l~~i~~~l~~~~~~~~rd~L~k~L~~~l~--~~~~~~~ii~~i~d~~g~~ei~e~n--~~eqlciN~~nE~l~~~ 93 (148)
.+.+.+|+.=+|+..-|..|...-+-.+- .+.+..+.-..+ -|.. ..+.| -|.+++|||.|+.--+=
T Consensus 137 ~~~v~dYl~WRQ~D~h~Nnlynt~fw~Lv~~~G~s~~eA~~~L---~Gt~-s~dknEiLf~~fGINyn~~P~~~r 207 (269)
T 3otd_A 137 NQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQGRL---QGTL-AADKNEILFSEFNINYNNELPMYR 207 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH---TTCC-HHHHHHHHHHHHCCCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCHHHHHHHH---cCCc-HHHHHHHHHHHcCCChhhCcHhHc
Confidence 36789999999999999999888887665 244444322211 1211 11222 37789999998765553
No 29
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=21.68 E-value=1.4e+02 Score=18.76 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCccchhhHHHHHHHhhhcCCC
Q psy1827 42 LQEQLEEQISEGASIKDIVADIREIANKHCIP 73 (148)
Q Consensus 42 L~k~L~~~l~~~~~~~~ii~~i~d~~g~~ei~ 73 (148)
|-..+++++..+.+-.+|+..+-+-+|.|-+.
T Consensus 45 lR~~Vre~l~~G~Sd~eI~~~mv~RYGdfVly 76 (90)
T 2kw0_A 45 LRQKVYELMQEGKSKKEIVDYMVARYGNFVTY 76 (90)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHTTTCBC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhcCCeEEe
Confidence 44557777778889999999999999976543
No 30
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=20.70 E-value=1.2e+02 Score=18.64 Aligned_cols=30 Identities=23% Similarity=0.261 Sum_probs=23.5
Q ss_pred HHHHHHHHHhcCccchhhHHHHHHHhhhcC
Q psy1827 42 LQEQLEEQISEGASIKDIVADIREIANKHC 71 (148)
Q Consensus 42 L~k~L~~~l~~~~~~~~ii~~i~d~~g~~e 71 (148)
|-..+++++..+.+-.+|+..+.+-+|.|-
T Consensus 48 lR~~V~~~l~~G~sd~eI~~~~v~RYG~fV 77 (84)
T 2hl7_A 48 LRKQIYGQLQQGKSDGEIVDYMVARYGDFV 77 (84)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhcCCee
Confidence 445577777788888999988889899654
Done!