BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1836
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q10121|YSD2_CAEEL RutC family protein C23G10.2 OS=Caenorhabditis elegans GN=C23G10.2
PE=3 SV=3
Length = 171
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
QAV+ NT+Y+SG LG+D +G + EGV Q Q+L N+G +LK AG Y +VVKTT+LL
Sbjct: 58 QAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAAGADYGNVVKTTVLL 117
Query: 80 NDINDFATVNNVYGQFFKPPYPARSTFQVGKLP---LIDFCLVVLGGH 124
+I DFA VN VYGQ+FK PYPAR+ +QV LP L++ V + G
Sbjct: 118 QNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEAVAIAGE 165
>sp|P52758|UK114_HUMAN Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1
Length = 137
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+YISG +G+D SSG++ G V +AKQAL NMG ILK AG + +VVKTT+L
Sbjct: 23 QAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DINDF TVN +Y Q+FK +PAR+ +QV LP
Sbjct: 83 LADINDFNTVNEIYKQYFKSNFPARAAYQVAALP 116
>sp|Q3T114|UK114_BOVIN Ribonuclease UK114 OS=Bos taurus GN=HRSP12 PE=2 SV=3
Length = 137
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+YISG LG+D +SG++ G V +AKQALTN+G ILK AG + +VVK T+L
Sbjct: 23 QAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKAAGCDFTNVVKATVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DINDF+TVN+VY Q+F+ +PAR+ +QV LP
Sbjct: 83 LADINDFSTVNDVYKQYFQSSFPARAAYQVAALP 116
>sp|P80601|UK114_CAPHI Ribonuclease UK114 OS=Capra hircus GN=HRSP12 PE=1 SV=3
Length = 137
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+YISG LG+D +SG++ G V +AKQALTN+G ILK AG + +VVK T+L
Sbjct: 23 QAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGEILKAAGCDFTNVVKATVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DINDF+ VN+VY Q+F+ +PAR+ +QV LP
Sbjct: 83 LADINDFSAVNDVYKQYFQSSFPARAAYQVAALP 116
>sp|P52760|UK114_MOUSE Ribonuclease UK114 OS=Mus musculus GN=Hrsp12 PE=1 SV=3
Length = 135
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAVQ D T+YISG +G+D SSG++ G V +AKQAL N+G ILK AG + +VVKTT+L
Sbjct: 23 QAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGEILKAAGCDFNNVVKTTVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D+NDF TVN +Y +F+ PAR+ +QV LP
Sbjct: 83 LADMNDFGTVNEIYKTYFQGSLPARAAYQVAALP 116
>sp|P52759|UK114_RAT Ribonuclease UK114 OS=Rattus norvegicus GN=Hrsp12 PE=1 SV=3
Length = 137
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+Y+SG +G+D SSG++ G V +AKQAL N+G ILK AG + +VVKTT+L
Sbjct: 23 QAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DINDF TVN +Y +F+ PAR+ +QV LP
Sbjct: 83 LADINDFGTVNEIYKTYFQGNLPARAAYQVAALP 116
>sp|Q9ZKQ6|Y944_HELPJ RutC family protein jhp_0879 OS=Helicobacter pylori (strain J99)
GN=jhp_0879 PE=3 SV=1
Length = 125
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 4/114 (3%)
Query: 1 MCLMLHASLV-SLVGSASAFQAVQHDNTLYISGVLGIDASSGKM-AEGVENQAKQALTNM 58
M ++H++L +G S QA+ ++ +++SG LGID S+G+ + +Q Q++ N+
Sbjct: 1 MKEVIHSTLAPKAIGPYS--QAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENI 58
Query: 59 GHILKEAGGSYEHVVKTTILLNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
ILKEAG + VVKTTILL ++DFA VN +YG +FK PYPAR+TFQV KLP
Sbjct: 59 KAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLP 112
>sp|O25598|Y944_HELPY RutC family protein HP_0944 OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=HP_0944 PE=3 SV=1
Length = 125
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 1 MCLMLHASLV-SLVGSASAFQAVQHDNTLYISGVLGIDASSGKM-AEGVENQAKQALTNM 58
M ++H++L +G S QA+ ++ +++SG LGID S+G+ + +Q Q++ N+
Sbjct: 1 MKEVIHSTLAPKAIGPYS--QAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENI 58
Query: 59 GHILKEAGGSYEHVVKTTILLNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
ILKEAG + VVKTTILL ++DFA VN +YG +F PYPAR+TFQV KLP
Sbjct: 59 KAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLP 112
>sp|P52761|Y709_SYNY3 RutC family protein slr0709 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=slr0709 PE=3 SV=1
Length = 130
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 20 QAVQHDNTLYISGVLGIDASSGK-MAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTI 77
QA+ + L+ +G + +D + M EG VE QAKQ LTN+G +L+EAG +E+VVKTT+
Sbjct: 20 QAIAANGFLFTAGQIALDPQTMTIMGEGNVEVQAKQVLTNLGAVLQEAGCGWENVVKTTV 79
Query: 78 LLNDINDFATVNNVYGQFF-KPPYPARSTFQVGKLP---LIDF-CLVVL 121
L D+NDFA VN +YGQ+F + PARS +V +LP L++ C+ VL
Sbjct: 80 FLKDMNDFAAVNAIYGQYFDEATAPARSCVEVARLPKDVLVEIDCVAVL 128
>sp|P55654|Y4SK_RHISN RutC family protein y4sK OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01620 PE=3 SV=1
Length = 126
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKM--AEGVENQAKQALTNMGHILKEAGGSYEHVVKTTI 77
QA++ + L++SG L ID ++G+ A VE QA+Q L N+ I + AG VKTT+
Sbjct: 19 QAIKVGDLLFVSGQLPIDPATGEFNSANAVE-QAEQCLKNLQAIARAAGTDLSKTVKTTV 77
Query: 78 LLNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
LL D+ DFA +N VY FF PYPAR+ ++V LP
Sbjct: 78 LLTDLGDFADINRVYTGFFSTPYPARACYEVKALP 112
>sp|Q9UZA3|Y1251_PYRAB RutC family protein PYRAB12510 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=PYRAB12510 PE=3 SV=1
Length = 127
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ N ++++G + ID +G++ +G ++ Q K+ + N+ IL+EAG S VVK T+
Sbjct: 20 QAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEEAGASLNDVVKVTVY 79
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D+NDFA +N VY ++F PAR +V +LP
Sbjct: 80 LKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLP 113
>sp|Q8U308|RIDA_PYRFU Enamine/imine deaminase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=yjgF PE=1 SV=1
Length = 126
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ N L+I+G + ID +G++ +G ++ Q +Q L N+ IL+ AG S VVK T+
Sbjct: 19 QAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKAILEAAGYSLTDVVKVTVY 78
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D+NDFA +N VY ++F PAR+ +V +LP
Sbjct: 79 LKDMNDFAKMNEVYAEYFGESKPARAAVEVSRLP 112
>sp|O58584|Y854_PYRHO RutC family protein PH0854 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH0854 PE=1 SV=2
Length = 126
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ N L+I+G + ID +G++ +G +++Q +Q L N+ IL+ AG S V+K T+
Sbjct: 19 QAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVY 78
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D+NDFA +N VY ++F PAR +V +LP
Sbjct: 79 LKDMNDFAKMNEVYAEYFGESKPARVAVEVSRLP 112
>sp|P97117|Y142_LEUMC RutC family protein in leuC 5'region OS=Leuconostoc mesenteroides
subsp. cremoris PE=3 SV=1
Length = 130
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA+ +DNTLYISG +GID + + A QA Q N+ +IL EA S +VK +
Sbjct: 20 QAILNDNTLYISGQIGIDPETDEFAGATTAEQAHQIFDNIDNILHEAEFSRNDIVKAALF 79
Query: 79 LNDINDFATVNNVYGQFFK----PPYPARSTFQVGKLP 112
+DI DFA VN++Y Q+F +PARS QV LP
Sbjct: 80 FDDIADFALVNDIYAQYFDTTSVEEFPARSAVQVAALP 117
>sp|Q9L6B5|Y1466_PASMU RutC family protein PM1466 OS=Pasteurella multocida (strain Pm70)
GN=PM1466 PE=3 SV=1
Length = 129
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
QAV N L SG + ++ +G++ + QA+Q+L N+ I+++AG ++VKTT+ +
Sbjct: 19 QAVDLGNMLLTSGQIPVNPKTGEVPADIVAQARQSLENVKAIVEQAGLQVANIVKTTVFV 78
Query: 80 NDINDFATVNNVYGQFFK----PPYPARSTFQVGKLP 112
D+NDFA VN Y +FFK P +PARS +V +LP
Sbjct: 79 KDLNDFAAVNAEYERFFKENNHPSFPARSCVEVARLP 115
>sp|P44839|Y719_HAEIN RutC family protein HI_0719 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0719 PE=1 SV=1
Length = 130
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
QAV N + SG + ++ ++G++ + QA+Q+L N+ I+++AG + +VKTT+ +
Sbjct: 20 QAVDLGNLVLTSGQIPVNPATGEVPADIVAQARQSLENVKAIIEKAGLTAADIVKTTVFV 79
Query: 80 NDINDFATVNNVYGQFFK----PPYPARSTFQVGKLP 112
D+NDFA VN Y +FFK P +PARS +V +LP
Sbjct: 80 KDLNDFAAVNAEYERFFKENNHPNFPARSCVEVARLP 116
>sp|O66689|Y364_AQUAE RutC family protein aq_364 OS=Aquifex aeolicus (strain VF5)
GN=aq_364 PE=3 SV=1
Length = 125
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
QAV+ + L+ISG +GI+ +GK+ EG + Q Q N+ IL+EAG E++VK TI +
Sbjct: 18 QAVEVNGFLFISGQIGINPETGKLVEGFKEQVIQIFKNVDAILEEAGLKRENIVKVTIYI 77
Query: 80 NDINDFATVNNVYGQFFK--PPYPARSTFQVGKLPL 113
DI F +N +Y +FK PAR T V +LPL
Sbjct: 78 TDIKKFKELNEIYEDYFKDVSVKPARVTVGVKELPL 113
>sp|O52178|DFRA_MYXXA Protein DfrA OS=Myxococcus xanthus GN=dfrA PE=3 SV=1
Length = 131
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 20 QAVQHD--NTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTT 76
QAVQ D ++SG + +D ++ +M +G V QA++ + N+ +L +G + HVV+ T
Sbjct: 23 QAVQVDAGKMTFLSGQIPLDPATMEMVQGDVVAQAERVMENLKAVLAASGLDFSHVVRCT 82
Query: 77 ILLNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
I L D+ DFA VN VYG++F PAR+T QV LP
Sbjct: 83 IFLTDLGDFARVNEVYGRYFTGAPPARATVQVSALP 118
>sp|P37552|RIDA_BACSU Enamine/imine deaminase OS=Bacillus subtilis (strain 168) GN=yabJ
PE=1 SV=3
Length = 125
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
+N Y SG + + SG+M G ++ Q Q +N+ +L+EAG S+E VVK T+ + D+
Sbjct: 24 NNMFYSSGQIPL-TPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADME 82
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVGKLP 112
FA VN VYGQ+F PARS +V +LP
Sbjct: 83 QFAEVNEVYGQYFDTHKPARSCVEVARLP 111
>sp|Q7CP78|RIDA_SALTY Enamine/imine deaminase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=ridA PE=1 SV=1
Length = 128
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V + + SG + +D +G +AE V QA+Q+L N+ I++ AG +VKTT+ +
Sbjct: 19 QGVDLGSMVITSGQIPVDPKTGAVAEDVSAQARQSLENVKAIVEAAGLKVGDIVKTTVFV 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFATVN Y FF +PARS +V +LP
Sbjct: 79 KDLNDFATVNATYEAFFTEHNATFPARSCVEVARLP 114
>sp|O43003|MMF1_SCHPO Protein mmf1, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mmf1 PE=3 SV=1
Length = 162
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ + +Y SG I ++GK+ EG V +Q +Q L N+ +L EAG S +VK I
Sbjct: 55 QAIKANGVIYCSG--QIPVANGKVIEGTVGDQTRQCLLNLQEVLTEAGSSLNKIVKVNIF 112
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
L D++DFA VN VY + P PARS V +PL
Sbjct: 113 LADMDDFAAVNKVYTEVLPDPKPARSCVAVKTVPL 147
>sp|Q973T6|Y811_SULTO RutC family protein STK_08110 OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=STK_08110 PE=1
SV=1
Length = 125
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ NTLY+SG + ID + ++ +G ++ Q +Q L N+ I+K AG S V +
Sbjct: 18 QAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVF 77
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP---LIDFCLVVLGG 123
L D+N F N+VY ++FK PAR T +V +LP LI+ ++ G
Sbjct: 78 LKDMNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIEIAVICSKG 125
>sp|P0AGL4|TDCF_SHIFL Putative reactive intermediate deaminase TdcF OS=Shigella flexneri
GN=tdcF PE=3 SV=1
Length = 129
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V + ++ SG + + +G++ V++QA+ +L N+ I+ AG S ++K T+ +
Sbjct: 19 QGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFI 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFAT+N VY QFF + YP RS QV +LP
Sbjct: 79 TDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLP 114
>sp|P0AGL2|TDCF_ECOLI Putative reactive intermediate deaminase TdcF OS=Escherichia coli
(strain K12) GN=tdcF PE=1 SV=1
Length = 129
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V + ++ SG + + +G++ V++QA+ +L N+ I+ AG S ++K T+ +
Sbjct: 19 QGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFI 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFAT+N VY QFF + YP RS QV +LP
Sbjct: 79 TDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLP 114
>sp|P0AGL3|TDCF_ECOL6 Putative reactive intermediate deaminase TdcF OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=tdcF PE=3
SV=1
Length = 129
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V + ++ SG + + +G++ V++QA+ +L N+ I+ AG S ++K T+ +
Sbjct: 19 QGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFI 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFAT+N VY QFF + YP RS QV +LP
Sbjct: 79 TDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLP 114
>sp|P0AF95|RIDA_SHIFL Enamine/imine deaminase OS=Shigella flexneri GN=yjgF PE=3 SV=2
Length = 128
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V N + SG + ++ +G++ V QA+Q+L N+ I++ AG +VKTT+ +
Sbjct: 19 QGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFV 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFATVN Y FF +PARS +V +LP
Sbjct: 79 KDLNDFATVNATYEAFFTEHNATFPARSCVEVARLP 114
>sp|P0AF93|RIDA_ECOLI Enamine/imine deaminase OS=Escherichia coli (strain K12) GN=ridA
PE=1 SV=2
Length = 128
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V N + SG + ++ +G++ V QA+Q+L N+ I++ AG +VKTT+ +
Sbjct: 19 QGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFV 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFATVN Y FF +PARS +V +LP
Sbjct: 79 KDLNDFATVNATYEAFFTEHNATFPARSCVEVARLP 114
>sp|P0AF94|RIDA_ECOL6 Enamine/imine deaminase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=yjgF PE=3 SV=2
Length = 128
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V N + SG + ++ +G++ V QA+Q+L N+ I++ AG +VKTT+ +
Sbjct: 19 QGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFV 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFATVN Y FF +PARS +V +LP
Sbjct: 79 KDLNDFATVNATYEAFFTEHNATFPARSCVEVARLP 114
>sp|Q9UR06|MMF2_SCHPO Protein mmf2, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mmf2 PE=3 SV=1
Length = 126
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV+ ++ SG + G G ++ Q + + N+ +L+ AG S E +VK I
Sbjct: 19 QAVKSGGLIFCSGQAAV--KDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLEKLVKVNIF 76
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
L DI+DFA +N VY + P PAR+T GK+PL
Sbjct: 77 LTDIDDFAAMNEVYKEMLPDPMPARTTVAAGKIPL 111
>sp|P40431|YVN1_AZOVI RutC family protein in vnfA 5'region OS=Azotobacter vinelandii PE=3
SV=2
Length = 127
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ +T+Y+SG + +D + ++ EG E Q + N+ +++ AGGS+ +VK I
Sbjct: 20 QAIRAGDTVYLSGQIPLDPGTMELVEGDFEAQTVRVFENLKAVVEAAGGSFADIVKLNIF 79
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D+ FA N G++F PYPAR+ LP
Sbjct: 80 LTDLAHFANGNECMGRYFAQPYPARAAIACASLP 113
>sp|O34133|ALDR_LACLA Putative regulator AldR OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=aldR PE=3 SV=2
Length = 126
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 28 LYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFA 86
LY SG + ++ +G++ + +E Q +Q + N+ ILKEA ++ V+KTT L +I DF+
Sbjct: 26 LYASGQIPLNPLNGEIVGDSIETQTEQVMKNISAILKEAHSDFDLVIKTTCFLKNIEDFS 85
Query: 87 TVNNVYGQFFKPPYPARSTFQVGKLP 112
N +Y +FF +PARS V LP
Sbjct: 86 RFNAIYSKFFDKEFPARSAVGVAGLP 111
>sp|P40037|HMF1_YEAST Protein HMF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=HMF1 PE=1 SV=1
Length = 129
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
+N +++SG + + K+ EG + ++A+Q + N+ ++L+ + S + VVK I L DIN
Sbjct: 27 NNLIFLSGQIPV-TPDNKLVEGSIADKAEQVIQNIKNVLEASNSSLDRVVKVNIFLADIN 85
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
FA N+VY ++F PARS V LPL
Sbjct: 86 HFAEFNSVYAKYFNTHKPARSCVAVAALPL 115
>sp|P40185|MMF1_YEAST Protein MMF1, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MMF1 PE=1 SV=1
Length = 145
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 14 GSASAFQAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVV 73
+AS QA++ +N +Y+SG + + + + +A+Q N+ +IL E+ S +++V
Sbjct: 32 AAASYSQAMKANNFVYVSGQIPYTPDNKPVQGSISEKAEQVFQNVKNILAESNSSLDNIV 91
Query: 74 KTTILLNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL-IDFCLVVLG 122
K + L D+ +FA N+VY + F PARS V LPL +D + V+
Sbjct: 92 KVNVFLADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIA 141
>sp|Q6FFZ5|RUTC_ACIAD Putative aminoacrylate peracid reductase RutC OS=Acinetobacter sp.
(strain ADP1) GN=rutC PE=3 SV=1
Length = 126
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 16 ASAFQAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVK 74
A A + DN +Y+SG+L +D ++ + G Q + L + HIL AGGS + V
Sbjct: 16 APYVPATKADNIVYVSGILPLDENNDVVHVGDAAAQTRHVLETIKHILSNAGGSLKDVTF 75
Query: 75 TTILLNDINDFATVNNVYGQFFKPPYPARSTFQVG 109
I L D D+ +N VY ++F PAR QVG
Sbjct: 76 NHIFLRDWADYPAINQVYAEYFPEERPARYCVQVG 110
>sp|P57452|Y371_BUCAI RutC family protein BU371 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=BU371 PE=3 SV=1
Length = 128
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
QA++ DN + +SG + ID S ++ E + Q L N+ IL A +++KTT+
Sbjct: 19 QALKIDNFIILSGQIPIDVISNQIPENIAEQTYLVLKNIKLILVHAKFQVHNIIKTTVFT 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+ +N +Y +FF K +PARS +V KLP
Sbjct: 79 TDLKKINIINEIYKKFFIDNKSNFPARSCVEVQKLP 114
>sp|Q97U19|Y3206_SULSO RutC family protein SSO3206 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=SSO3206 PE=3 SV=1
Length = 126
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
Q V+ + LY+SG + +D + ++ + +E Q + + N+ +L+ AG + VV + +
Sbjct: 19 QGVKVGDILYVSGQIPVDPKTNEVVGKNIEEQTIRVIENIKAVLEAAGYMLDDVVMSFVY 78
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP---LIDFCLV 119
L DI DF N VY ++F PAR T +V +LP LI+ ++
Sbjct: 79 LKDIKDFQRFNEVYSKYFSNKPPARVTVEVSRLPRDVLIEITVI 122
>sp|Q8K9H7|Y359_BUCAP RutC family protein BUsg_359 OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=BUsg_359 PE=3 SV=1
Length = 128
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
QA++++N L ISG + ID SGK+ + Q L N+ I+ + + + ++K T+
Sbjct: 19 QAIKNENFLIISGQIPIDVKSGKIPNNISEQTYIVLKNIKSIIIASKYTIQDIIKITVFT 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
++ +N +Y +FF K +P RS +V KLP
Sbjct: 79 TNLEKIHIINEIYEKFFIDNKSSFPTRSCIEVQKLP 114
>sp|Q89AG0|Y334_BUCBP RutC family protein bbp_334 OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=bbp_334 PE=3 SV=1
Length = 126
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
QA+Q N ++SG + + + + + Q + L N+ +IL+ + ++VKTTI +
Sbjct: 19 QAIQIKNFTFLSGQI---SQTDNINTNISFQTQSILQNINYILESKEMNVGNIVKTTIFI 75
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
++ND VN+VY +FF +PARS +V KLP
Sbjct: 76 TNLNDLTIVNDVYQKFFLKYTKTFPARSCVEVSKLP 111
>sp|C9Y0S5|RUTC_CROTZ Putative aminoacrylate peracid reductase RutC OS=Cronobacter
turicensis (strain DSM 18703 / LMG 23827 / z3032)
GN=rutC PE=3 SV=1
Length = 132
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D +Y+SG L D ++ + G + Q + L + H+++ AGG+ E V +I + D
Sbjct: 25 DGVVYVSGTLPFDKANNVVYPGDPKAQTRHVLETIRHVIETAGGTMEDVTFNSIFITDWK 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
++A +N +Y +FF PAR Q G
Sbjct: 85 NYAAINEIYAEFFPGDKPARFCIQCG 110
>sp|B1ZB17|RUTC_METPB Putative aminoacrylate peracid reductase RutC OS=Methylobacterium
populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)
GN=rutC PE=3 SV=1
Length = 130
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D LY+SG L +DA + + EG Q + L + +++ AGGS + V I L D
Sbjct: 25 DGVLYVSGTLPLDAEANVVHEGDAGAQTRHVLETIKSVVEAAGGSMDDVTFNHIFLKDWA 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
D+ +N VY ++F PAR Q G
Sbjct: 85 DYGAINAVYAEYFPGEKPARYCIQCG 110
>sp|D5VGV2|RUTC_CAUST Putative aminoacrylate peracid reductase RutC OS=Caulobacter segnis
(strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 /
LMG 17158 / TK0059) GN=rutC PE=3 SV=1
Length = 129
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D +Y+SG L D + G E Q +Q L + +++ AGG+ E VV I L D
Sbjct: 25 DGIVYVSGTLAFDKDNNVAFPGDAEAQTRQVLETIKSVIETAGGTMEDVVMNHIFLTDWV 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
+A +N VY ++F PAR Q G
Sbjct: 85 HYAPMNKVYAEYFPGDKPARYCIQCG 110
>sp|A9W3H9|RUTC_METEP Putative aminoacrylate peracid reductase RutC OS=Methylobacterium
extorquens (strain PA1) GN=rutC PE=3 SV=1
Length = 130
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D LY+SG L +DA + + EG Q + L + +++ AGGS + V I L D
Sbjct: 25 DGVLYVSGTLPLDAEANVVHEGDAGAQTRHVLETIKGVVEAAGGSMDDVTFNHIFLKDWA 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
D+ +N VY +F PAR Q G
Sbjct: 85 DYGAINAVYATYFPGEKPARYCIQCG 110
>sp|C7CM34|RUTC_METED Putative aminoacrylate peracid reductase RutC OS=Methylobacterium
extorquens (strain DSM 5838 / DM4) GN=rutC PE=3 SV=1
Length = 130
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D LY+SG L +DA + + EG Q + L + +++ AGGS + V I L D
Sbjct: 25 DGVLYVSGTLPLDAEANVVHEGDAGAQTRHVLETIKGVVEAAGGSMDDVTFNHIFLKDWA 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
D+ +N VY +F PAR Q G
Sbjct: 85 DYGAINAVYATYFPGEKPARYCIQCG 110
>sp|B7KWT5|RUTC_METC4 Putative aminoacrylate peracid reductase RutC OS=Methylobacterium
chloromethanicum (strain CM4 / NCIMB 13688) GN=rutC PE=3
SV=1
Length = 130
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D LY+SG L +DA + + EG Q + L + +++ AGGS + V I L D
Sbjct: 25 DGVLYVSGTLPLDAEANVVHEGDAGAQTRHVLETIKGVVEAAGGSMDDVTFNHIFLKDWA 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
D+ +N VY +F PAR Q G
Sbjct: 85 DYGAINAVYATYFPGEKPARYCIQCG 110
>sp|B0SW61|RUTC_CAUSK Putative aminoacrylate peracid reductase RutC OS=Caulobacter sp.
(strain K31) GN=rutC PE=3 SV=1
Length = 129
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSG-KMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D +Y+SG L D + + E Q +Q L + +++ AGG+ + V I L D +
Sbjct: 25 DGIVYVSGTLAFDKDNNVANPDDAEAQTRQVLETIKSVIETAGGTMDDVTMNHIFLTDWS 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
++ T+N VY ++F PAR Q G
Sbjct: 85 NYQTINKVYAEYFPGDKPARYCIQCG 110
>sp|A7ME54|RUTC_CROS8 Putative aminoacrylate peracid reductase RutC OS=Cronobacter
sakazakii (strain ATCC BAA-894) GN=rutC PE=3 SV=1
Length = 132
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D +Y+SG L D+++ + G + Q + L + +++ AGG+ E V +I + D
Sbjct: 25 DGVVYVSGTLPFDSANNVVYPGDPKAQTRHVLETIRRVIETAGGTMEDVTFNSIFITDWK 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
++A +N +Y +FF PAR Q G
Sbjct: 85 NYAAINEIYAEFFPGDKPARFCIQCG 110
>sp|C5B0U7|RUTC_METEA Putative aminoacrylate peracid reductase RutC OS=Methylobacterium
extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=rutC
PE=3 SV=1
Length = 130
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D LY+SG L +DA + + EG Q + L + +++ AGGS + + I L D
Sbjct: 25 DGVLYVSGTLPLDAEANVVHEGDAGAQTRHVLETIKGVVEAAGGSMDDITFNHIFLKDWA 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
D+ +N VY +F PAR Q G
Sbjct: 85 DYGAINAVYATYFPGEKPARYCIQCG 110
>sp|Q9A4N4|RUTC_CAUCR Putative aminoacrylate peracid reductase RutC OS=Caulobacter
crescentus (strain ATCC 19089 / CB15) GN=rutC PE=3 SV=1
Length = 129
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D +Y+SG L D + G E Q +Q L + +++ AGG+ E V I L D
Sbjct: 25 DGIVYVSGTLAFDKDNNVAFPGDAEAQTRQVLETIKSVIETAGGTMEDVTMNHIFLTDWV 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
+A +N VY ++F PAR Q G
Sbjct: 85 HYAPMNKVYAEYFPGDKPARYCIQCG 110
>sp|B8H1Q2|RUTC_CAUCN Putative aminoacrylate peracid reductase RutC OS=Caulobacter
crescentus (strain NA1000 / CB15N) GN=rutC PE=3 SV=1
Length = 129
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D +Y+SG L D + G E Q +Q L + +++ AGG+ E V I L D
Sbjct: 25 DGIVYVSGTLAFDKDNNVAFPGDAEAQTRQVLETIKSVIETAGGTMEDVTMNHIFLTDWV 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
+A +N VY ++F PAR Q G
Sbjct: 85 HYAPMNKVYAEYFPGDKPARYCIQCG 110
>sp|Q48MQ6|RUTC_PSE14 Putative aminoacrylate peracid reductase RutC OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=rutC PE=3 SV=1
Length = 127
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 25 DNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D LY+SG L D + + G Q + L + +++ AGG+ + V I++ D
Sbjct: 25 DGVLYVSGTLPFDKDNNVVHVGDATAQTRHVLETIKSVVETAGGTMDDVTFNMIMIRDWA 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
D+A VN VY ++F PAR Q G
Sbjct: 85 DYAKVNEVYAEYFAGEKPARYCIQCG 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,804,401
Number of Sequences: 539616
Number of extensions: 1703372
Number of successful extensions: 4401
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 4262
Number of HSP's gapped (non-prelim): 131
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)