Query psy1836
Match_columns 127
No_of_seqs 222 out of 1048
Neff 7.8
Searched_HMMs 13730
Date Fri Aug 16 17:36:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1836.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1836hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qd9a_ d.79.1.1 (A:) Purine r 100.0 2.2E-36 1.6E-40 203.5 13.1 112 10-123 8-120 (124)
2 d2cvla1 d.79.1.1 (A:1-124) Put 100.0 4.4E-36 3.2E-40 202.1 13.3 113 10-123 8-120 (124)
3 d1xrga_ d.79.1.1 (A:) Purine r 100.0 3.9E-36 2.8E-40 202.6 12.9 111 11-122 10-121 (125)
4 d1x25a1 d.79.1.1 (A:1-124) Hyp 100.0 3.6E-36 2.6E-40 202.4 12.5 113 10-123 8-121 (124)
5 d1qu9a_ d.79.1.1 (A:) Conserve 100.0 9.4E-36 6.9E-40 201.1 12.4 112 11-123 9-123 (127)
6 d2cwja1 d.79.1.1 (A:4-119) Put 100.0 3E-36 2.2E-40 200.5 9.6 112 12-124 2-114 (116)
7 d1jd1a_ d.79.1.1 (A:) Highdosa 100.0 1.3E-35 9.7E-40 200.2 12.8 111 11-123 11-122 (126)
8 d2b33a1 d.79.1.1 (A:2-127) Put 100.0 2.3E-35 1.7E-39 198.9 12.9 112 11-123 9-121 (126)
9 d1qaha_ d.79.1.1 (A:) 14.5 kda 100.0 1.7E-34 1.3E-38 196.0 13.1 111 11-122 13-124 (132)
10 d2ewca1 d.79.1.1 (A:3-122) Hyp 100.0 5.9E-33 4.3E-37 186.0 12.9 105 13-123 8-115 (120)
11 d1pf5a_ d.79.1.1 (A:) Hypothet 100.0 9.6E-32 7E-36 181.9 13.8 109 12-123 14-124 (130)
12 d2otma1 d.79.1.1 (A:2-153) Hyp 99.9 7.2E-26 5.3E-30 156.5 9.4 113 12-125 19-151 (152)
13 d1bupa2 c.55.1.1 (A:189-381) H 60.8 8.1 0.00059 24.6 5.2 47 51-99 122-169 (193)
14 d2hmfa2 d.58.18.10 (A:404-470) 58.0 11 0.00082 20.2 5.3 45 54-98 17-67 (67)
15 d1qnaa1 d.129.1.1 (A:17-115) T 56.4 6.1 0.00044 23.2 3.5 22 47-68 70-91 (99)
16 d1aisa1 d.129.1.1 (A:1-92) TAT 53.4 2.8 0.0002 24.4 1.6 21 47-67 72-92 (92)
17 d1mxaa1 d.130.1.1 (A:1-102) S- 50.2 18 0.0013 21.3 5.0 59 15-79 33-95 (102)
18 d1mp9a1 d.129.1.1 (A:5-96) TAT 48.1 4.9 0.00036 23.2 2.1 21 47-67 72-92 (92)
19 d2otaa1 a.284.1.1 (A:7-68) Hyp 46.5 9.2 0.00067 20.6 2.9 23 48-70 3-25 (62)
20 d2qtia1 a.284.1.1 (A:8-72) Unc 44.5 9.6 0.0007 20.8 2.8 23 48-70 2-24 (65)
21 d2juza1 a.284.1.1 (A:1-72) Unc 42.3 12 0.00088 20.8 3.0 23 48-70 9-31 (72)
22 d2jrxa1 a.284.1.1 (A:1-75) Unc 39.7 12 0.00089 20.9 2.8 23 48-70 9-31 (75)
23 d2jpqa1 a.284.1.1 (A:1-75) Hyp 39.6 13 0.00095 20.8 2.9 23 48-70 9-31 (75)
24 d1xhja_ d.52.8.1 (A:) Nitrogen 38.2 13 0.00095 21.3 2.9 26 45-70 6-31 (88)
25 d1dkgd2 c.55.1.1 (D:186-383) H 36.0 29 0.0021 22.0 4.8 52 45-98 118-174 (198)
26 d2p02a1 d.130.1.1 (A:38-147) S 35.4 40 0.0029 19.9 5.0 60 16-81 34-97 (110)
27 d1u6ea2 c.95.1.2 (A:175-317) K 32.8 23 0.0016 21.8 3.6 44 48-94 44-87 (148)
28 d1otfa_ d.80.1.1 (A:) 4-oxaloc 32.6 30 0.0022 17.6 4.2 37 48-85 13-50 (59)
29 d1px5a2 d.218.1.6 (A:1-200) 2' 30.9 51 0.0037 21.5 5.4 41 45-85 23-87 (200)
30 d1zbsa2 c.55.1.5 (A:1-107) Hyp 30.2 45 0.0033 18.9 6.7 72 19-97 12-87 (107)
31 d2qalf1 d.58.14.1 (F:1-100) Ri 29.7 17 0.0013 20.8 2.5 26 46-71 13-38 (100)
32 d1ub7a2 c.95.1.2 (A:174-322) K 29.1 28 0.0021 21.2 3.6 25 51-75 46-70 (149)
33 d1xhoa_ d.79.1.2 (A:) Chorisma 27.1 59 0.0043 19.3 6.2 42 47-88 15-58 (112)
34 d1mp9a2 d.129.1.1 (A:97-197) T 27.0 13 0.00096 21.6 1.6 22 46-67 70-91 (101)
35 d1hnja2 c.95.1.2 (A:175-317) K 26.4 36 0.0026 20.6 3.7 27 49-75 41-67 (143)
36 d1mzja2 c.95.1.2 (A:184-336) P 26.2 31 0.0022 21.2 3.4 26 51-76 47-72 (153)
37 d1veha_ d.52.8.1 (A:) HIRA-int 26.2 54 0.004 18.6 4.9 54 45-98 12-79 (92)
38 d3cx5a2 d.185.1.1 (A:240-457) 26.0 38 0.0028 21.5 4.0 28 86-113 177-205 (218)
39 d1qnaa2 d.129.1.1 (A:116-198) 25.4 13 0.00094 20.8 1.2 19 47-65 62-80 (83)
40 d1r2za1 a.156.1.2 (A:135-228) 24.9 14 0.001 21.2 1.3 41 27-71 46-90 (94)
41 d2cdqa3 d.58.18.10 (A:420-494) 24.1 51 0.0037 17.7 3.7 48 52-99 14-67 (75)
42 d1pjra2 c.37.1.19 (A:319-651) 23.5 83 0.0061 20.5 5.6 47 45-94 9-55 (333)
43 d2a6aa1 c.55.1.9 (A:1-103) Hyp 23.2 22 0.0016 20.3 2.1 40 49-89 32-71 (103)
44 d1ppja2 d.185.1.1 (A:234-442) 22.4 56 0.0041 20.3 4.3 28 85-112 171-199 (209)
45 d1vi7a2 d.58.11.2 (A:138-208) 22.1 53 0.0039 17.0 5.6 43 55-98 14-61 (71)
46 d1okja1 c.55.1.9 (A:1-106) Hyp 21.8 23 0.0017 20.4 2.0 39 50-89 33-71 (106)
47 d1u0ma2 c.95.1.2 (A:202-349) P 21.8 30 0.0022 21.1 2.7 26 51-76 42-67 (148)
48 d3bypa1 d.52.9.1 (A:6-87) Puta 21.3 62 0.0045 17.4 4.1 40 21-66 30-69 (82)
49 d1dbfa_ d.79.1.2 (A:) Chorisma 21.1 85 0.0062 19.0 6.1 59 47-107 17-78 (127)
50 d2d0oa2 c.55.1.6 (A:1-92,A:255 21.1 66 0.0048 21.5 4.4 30 49-78 45-74 (241)
51 d2hgka1 a.29.17.1 (A:1-109) Hy 21.0 49 0.0036 19.5 3.4 38 47-84 3-46 (109)
52 d1gkab_ b.60.1.1 (B:) Alpha-cr 20.4 34 0.0025 20.6 2.7 22 54-75 143-164 (174)
53 d1ox0a2 c.95.1.1 (A:252-409) B 20.0 42 0.0031 20.6 3.1 44 55-99 29-74 (158)
No 1
>d1qd9a_ d.79.1.1 (A:) Purine regulatory protein YabJ {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=2.2e-36 Score=203.55 Aligned_cols=112 Identities=35% Similarity=0.564 Sum_probs=104.9
Q ss_pred ccccCCCCcceEEEECCEEEEccccccCCCCCccc-ccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHH
Q psy1836 10 VSLVGSASAFQAVQHDNTLYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATV 88 (127)
Q Consensus 10 ~~~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~-~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~ 88 (127)
-.+.|.+|||||+++|+++|+|||+|.|+ ++... +|+++|++++|+||+++|+++|++++||+|+++|++|+++|+.+
T Consensus 8 ~aP~~~gpys~av~~g~~lfiSGq~~~d~-~~~~~~~~~~~Q~~~~l~ni~~iL~~aG~~~~div~~~v~~~d~~~~~~~ 86 (124)
T d1qd9a_ 8 HAPAAIGPYSQGIIVNNMFYSSGQIPLTP-SGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEV 86 (124)
T ss_dssp TSCCCCSSCBSEEEETTEEEECCBCSBCT-TSCBCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHH
T ss_pred CCCCCcCCCcceEEECCEEEEEeeecccc-cceeecchhHHHHHHHHHHHHHHHHHcCCCcccCceEEEEeCCHHHHHHH
Confidence 34678899999999999999999999999 55555 89999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCccEEEEcCCCCCCCEEEEEecc
Q psy1836 89 NNVYGQFFKPPYPARSTFQVGKLPLIDFCLVVLGG 123 (127)
Q Consensus 89 ~~v~~~~f~~~~Pa~t~v~V~~L~~~~~liEi~~~ 123 (127)
+++|.+||++++|+||+++|+.|| ++++||||+-
T Consensus 87 ~~~~~~~f~~~~Pa~t~v~v~~L~-~~~~VEIe~i 120 (124)
T d1qd9a_ 87 NEVYGQYFDTHKPARSCVEVARLP-KDALVEIEVI 120 (124)
T ss_dssp HHHHHHHSSSCCCEEEEEECSBCG-GGCSEEEEEE
T ss_pred HHHHHhhcCCCCCccEEEEECcCC-CCCEEEEEEE
Confidence 999999999999999999999998 7899999873
No 2
>d2cvla1 d.79.1.1 (A:1-124) Putative translation intiation inhibitor TTHA0137 {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=4.4e-36 Score=202.07 Aligned_cols=113 Identities=29% Similarity=0.499 Sum_probs=105.9
Q ss_pred ccccCCCCcceEEEECCEEEEccccccCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHH
Q psy1836 10 VSLVGSASAFQAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVN 89 (127)
Q Consensus 10 ~~~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~ 89 (127)
..+.|.+||||++++|+++|+|||+|.|+.++.+++|+++|++++|+||+++|+++|++++||+|+++|++|+++|+.++
T Consensus 8 ~ap~p~gpys~av~~g~~~~vSGq~~~d~~~~~~~~~~~~Q~~~~l~~i~~~L~~~G~~~~dvvk~~~y~~~~~~~~~~~ 87 (124)
T d2cvla1 8 RAPAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVMENLKAVLEAAGSGLSRVVQTTCFLADMEDFPGFN 87 (124)
T ss_dssp TSCCCCSSCBSEEEETTEEEEEEECSBCTTSCBCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHH
T ss_pred CCCCCCCCccceEEECCEEEEEEecCCCCCcccccCCHhHHHHHHHHHHHHHHHHhcCCccccEEEEEEEeccccHHHHH
Confidence 34678899999999999999999999999555556999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCccEEEEcCCCCCCCEEEEEecc
Q psy1836 90 NVYGQFFKPPYPARSTFQVGKLPLIDFCLVVLGG 123 (127)
Q Consensus 90 ~v~~~~f~~~~Pa~t~v~V~~L~~~~~liEi~~~ 123 (127)
++|.+||++++|+||+++|..|+ |+++||||+.
T Consensus 88 ~v~~~~f~~~~Pa~t~v~v~~L~-~~~lVEIe~i 120 (124)
T d2cvla1 88 EVYARYFTPPYPARATVAVKALP-RGVRVEVACV 120 (124)
T ss_dssp HHHHHHCCSSCCEEEEEECSCCG-GGCSEEEEEE
T ss_pred HHHHHhccCCCCCcEEEEeCcCC-CCCEEEEEEE
Confidence 99999999999999999999997 8999999974
No 3
>d1xrga_ d.79.1.1 (A:) Purine regulatory protein YabJ {Clostridium thermocellum [TaxId: 1515]}
Probab=100.00 E-value=3.9e-36 Score=202.63 Aligned_cols=111 Identities=38% Similarity=0.646 Sum_probs=103.8
Q ss_pred cccCCCCcceEEEECCEEEEccccccCCCCCccc-ccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHH
Q psy1836 11 SLVGSASAFQAVQHDNTLYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVN 89 (127)
Q Consensus 11 ~~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~-~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~ 89 (127)
.+.|.++|||++++|+++|+|||+|.|+.++... +|+++|++++|+||+++|+++|++++||+|+++|++|+++|+.++
T Consensus 10 aP~~~g~yS~av~~g~~i~vSGq~~~~~~~~~~~~~d~~~Q~~~~l~ni~~~L~~aG~~~~dvvk~~~y~~~~~~~~~~~ 89 (125)
T d1xrga_ 10 APEAIGPYSQAIVTGSFVYTSGQIPINPQTGEVVDGGIEEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVN 89 (125)
T ss_dssp SCCCCSSCCSEEEETTEEEECCBCCBCTTTSSBCSSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHH
T ss_pred CCcccCCcCCeEEECCEEEEEEEeecccccceeecCchhHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecccccHHHHH
Confidence 3678899999999999999999999999433433 899999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCccEEEEcCCCCCCCEEEEEec
Q psy1836 90 NVYGQFFKPPYPARSTFQVGKLPLIDFCLVVLG 122 (127)
Q Consensus 90 ~v~~~~f~~~~Pa~t~v~V~~L~~~~~liEi~~ 122 (127)
++|.+||++++|+||+++|..|+ |+++|||++
T Consensus 90 ~~~~~~f~~~~Pa~t~v~v~~L~-~~~~VEIe~ 121 (125)
T d1xrga_ 90 EVYAKYFSEPYPARSCVEVSKLP-KGVLIEIEA 121 (125)
T ss_dssp HHHHTTCCSSCCEEEEEECSBCG-GGCSEEEEE
T ss_pred HHHHHhhcCCCCCceEEEeCcCC-CCCEEEEEE
Confidence 99999999999999999999997 899999986
No 4
>d1x25a1 d.79.1.1 (A:1-124) Hypothetical protein ST0811 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=100.00 E-value=3.6e-36 Score=202.40 Aligned_cols=113 Identities=33% Similarity=0.473 Sum_probs=105.1
Q ss_pred ccccCCCCcceEEEECCEEEEccccccCCCCCccc-ccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHH
Q psy1836 10 VSLVGSASAFQAVQHDNTLYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATV 88 (127)
Q Consensus 10 ~~~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~-~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~ 88 (127)
..+.|.++|||++++|+++|+|||+|.|+.++... +|+++|++++|+|++++|+++|++++||+|+++|++|+++|+.+
T Consensus 8 ~aP~p~g~ys~av~~g~~ifvSGq~~~d~~~~~~~~~~~~~Q~~~~~~ni~~~L~~aG~~~~~vvk~~~yv~d~~~~~~~ 87 (124)
T d1x25a1 8 KAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKDMNMFNDF 87 (124)
T ss_dssp TSCCCCSSCCSEEEETTEEEEEEECSEETTTTEECSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHH
T ss_pred CCCCCcCCcCcEEEECCEEEEEEecCcCCCCceeccccHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEEECCHHHHHHH
Confidence 45678899999999999999999999999444444 79999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCccEEEEcCCCCCCCEEEEEecc
Q psy1836 89 NNVYGQFFKPPYPARSTFQVGKLPLIDFCLVVLGG 123 (127)
Q Consensus 89 ~~v~~~~f~~~~Pa~t~v~V~~L~~~~~liEi~~~ 123 (127)
+++|.+||++++|+||+++|+.|| ++++||||+-
T Consensus 88 ~~v~~~~f~~~~Pa~t~v~v~~L~-~~~~VEIe~i 121 (124)
T d1x25a1 88 NSVYAEYFKDKPPARVTVEVSRLP-KDALIEIAVI 121 (124)
T ss_dssp HHHHHHHCCSSCCEEEEEECSCCG-GGCSEEEEEE
T ss_pred HHHHHHhccccccceEEEEeCCCC-CCCEEEEEEE
Confidence 999999999999999999999999 6899999973
No 5
>d1qu9a_ d.79.1.1 (A:) Conserved 'hypothetical' protein YjgF {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=9.4e-36 Score=201.07 Aligned_cols=112 Identities=34% Similarity=0.539 Sum_probs=103.3
Q ss_pred cccCCCCcceEEEECCEEEEccccccCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHHH
Q psy1836 11 SLVGSASAFQAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVNN 90 (127)
Q Consensus 11 ~~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~~ 90 (127)
.+.|.++|||++++|+++|+|||+|.|+.++.+++|+++|++++|+|++++|+++|++++||+|+++|++|+++|+.+++
T Consensus 9 aP~p~g~Ys~av~~g~~vfvSGq~~~~~~~~~~~~d~~~Q~~~~~~~i~~~L~~aG~~~~dvvk~~vy~~d~~~~~~~~~ 88 (127)
T d1qu9a_ 9 APAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNA 88 (127)
T ss_dssp SCCCCSSCBSEEECSSEEEECCBCSCCTTTCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHH
T ss_pred CCCCcCCCCCeEEECCEEEEEEecCCCCcceEeeCCHHHHHHHHHHHHHHHHHHcCCCccCcEEEEEEEcChhHhHHHHH
Confidence 45688999999999999999999999995455669999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCC---CCCccEEEEcCCCCCCCEEEEEecc
Q psy1836 91 VYGQFFKP---PYPARSTFQVGKLPLIDFCLVVLGG 123 (127)
Q Consensus 91 v~~~~f~~---~~Pa~t~v~V~~L~~~~~liEi~~~ 123 (127)
+|.+||+. ++|+||+|+|+.|| ++++||||+-
T Consensus 89 v~~~~~~~~~~~~Part~v~V~~L~-~~~~VEIe~i 123 (127)
T d1qu9a_ 89 TYEAFFTEHNATFPARSCVEVARLP-KDVKIEIEAI 123 (127)
T ss_dssp HHHHHHHHTTCCCCEEEEEECSBCG-GGCSEEEEEE
T ss_pred HHHHHHhccCCCCCCcEEEEeccCC-CCCeEEEEEE
Confidence 99999964 47999999999998 7899999973
No 6
>d2cwja1 d.79.1.1 (A:4-119) Putative endonuclease APE1501 {Aeropyrum pernix [TaxId: 56636]}
Probab=100.00 E-value=3e-36 Score=200.53 Aligned_cols=112 Identities=34% Similarity=0.541 Sum_probs=104.5
Q ss_pred ccCCCCcceEEEECCEEEEccccccCCCCCccc-ccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHHH
Q psy1836 12 LVGSASAFQAVQHDNTLYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVNN 90 (127)
Q Consensus 12 ~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~-~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~~ 90 (127)
+.|.++|||++++|+++|+|||+|.|+..+... +|+++|++++|+||+++|+++|++++||+|+++|++|+++|+.+++
T Consensus 2 P~p~g~Ys~av~~g~~i~iSGq~~~d~~~~~~~~~~~~~Q~~~~~~ni~~il~~ag~~~~~vvk~~v~~~~~~~~~~~~~ 81 (116)
T d2cwja1 2 PKPVGPYSQAVESGCFMFVSGQIPINPETGALEEGGFKESAKRALDNLKAIVEGAGYSMDDIVKVTVYITDISRFSEFNE 81 (116)
T ss_dssp CCCCSSCCSCEEETTEEEEEEECCEEGGGTEECSSSSHHHHHHHHHHHHHHHHHTSCCGGGCCEEEEEESSSSHHHHHHH
T ss_pred ccCcCCCCCeEEECCEEEEeCcCCCCCccCccccchHHHHHHHHHHHHHHHHHHcCCcccccEEEEEEeCchHHHHHHHH
Confidence 568899999999999999999999998445455 8999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCccEEEEcCCCCCCCEEEEEeccc
Q psy1836 91 VYGQFFKPPYPARSTFQVGKLPLIDFCLVVLGGH 124 (127)
Q Consensus 91 v~~~~f~~~~Pa~t~v~V~~L~~~~~liEi~~~~ 124 (127)
+|++||++++|+||+|+|+.||. +++||||+..
T Consensus 82 ~~~~~f~~~~pa~t~v~v~~L~~-~~~VEIe~ia 114 (116)
T d2cwja1 82 VYREYFNRPYPARAVVGVAALPL-GAPLEVEAVL 114 (116)
T ss_dssp HHHTTCCSSCCEEEEEECSCCGG-GCSEEEEEEC
T ss_pred HHHHHcCCCCCCEEEEEcccCCC-CCeEEEEEEE
Confidence 99999999999999999999985 5899999863
No 7
>d1jd1a_ d.79.1.1 (A:) Highdosage growth inhibitor YER057cp (YEO7_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.3e-35 Score=200.18 Aligned_cols=111 Identities=30% Similarity=0.523 Sum_probs=104.5
Q ss_pred cccCCCCcceEEEECCEEEEccccccCCCCCccc-ccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHH
Q psy1836 11 SLVGSASAFQAVQHDNTLYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVN 89 (127)
Q Consensus 11 ~~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~-~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~ 89 (127)
.+.|.++|||++++|+++|+|||+|.|+ +|... +|+++|++++|+|++++|+++|++++||+|+++|++|+++|+.++
T Consensus 11 aP~~~gpYs~av~~g~~ifiSGq~~~d~-~~~~~~~~~~~Q~~~~~~~i~~~L~~~g~~~~~vv~~~v~~~d~~~~~~~~ 89 (126)
T d1jd1a_ 11 APAAAASYSHAMKVNNLIFLSGQIPVTP-DNKLVEGSIADKAEQVIQNIKNVLEASNSSLDRVVKVNIFLADINHFAEFN 89 (126)
T ss_dssp SCCCSSSCCSEEEETTEEEEEEECSBCT-TSCBCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHH
T ss_pred CCCCcCCCCCeEEECCEEEEcccccccc-cceeeecccccchhHHHHHHHHHHHHcCCChhHceEEEEEccChHHhHHHH
Confidence 4568899999999999999999999999 66655 999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCccEEEEcCCCCCCCEEEEEecc
Q psy1836 90 NVYGQFFKPPYPARSTFQVGKLPLIDFCLVVLGG 123 (127)
Q Consensus 90 ~v~~~~f~~~~Pa~t~v~V~~L~~~~~liEi~~~ 123 (127)
++|.+||++++|+||+++|..|| ++++||||+.
T Consensus 90 ~v~~~~f~~~~Part~v~v~~L~-~~~~VEie~i 122 (126)
T d1jd1a_ 90 SVYAKYFNTHKPARSCVAVAALP-LGVDMEMEAI 122 (126)
T ss_dssp HHHHHHSSSSCCEEEEEECSBCG-GGCSEEEEEE
T ss_pred HHHHHHcCCCCCCcEEEEeccCC-CCCeEEEEEE
Confidence 99999999999999999999997 5789999874
No 8
>d2b33a1 d.79.1.1 (A:2-127) Putative protein synthesis inhibitor TM0215 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=2.3e-35 Score=198.91 Aligned_cols=112 Identities=29% Similarity=0.463 Sum_probs=104.3
Q ss_pred cccCCCCcceEEEECCEEEEccccccCCCCCccc-ccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHH
Q psy1836 11 SLVGSASAFQAVQHDNTLYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVN 89 (127)
Q Consensus 11 ~~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~-~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~ 89 (127)
.+.|.++||||+++|++||+|||++.++..+... +++++|++++|+||+++|+++|++++||+|+++|++|+++|+.++
T Consensus 9 aP~p~g~ys~av~~g~~i~~SGq~~~~~~~~~~~~~~~~~Q~~~~~~nl~~~L~~aG~~~~~vvk~~vy~~~~~d~~~~~ 88 (126)
T d2b33a1 9 APKAIGPYSQAVVVGNMMFVSGQIPIDPETGELVQGTIEEKTERVLENLKAILEAGGFSLKDVVKVTVFTTSMDYFQRVN 88 (126)
T ss_dssp SCCCCSSCCSEEEETTEEEEEEECSBCTTTCCBCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHH
T ss_pred CCCCCCCccceEEECCEEEEEeecCccCcccccccchhhHHHHHHHHHHHHHHHHcCCcccCcEEEEEEeCCHHHHHHHH
Confidence 4567899999999999999999999988544544 899999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCccEEEEcCCCCCCCEEEEEecc
Q psy1836 90 NVYGQFFKPPYPARSTFQVGKLPLIDFCLVVLGG 123 (127)
Q Consensus 90 ~v~~~~f~~~~Pa~t~v~V~~L~~~~~liEi~~~ 123 (127)
++|.+||++++|+||+++|..|| ++++||||+-
T Consensus 89 ~v~~~~~~~~~Part~v~v~~L~-~~~~VEIe~i 121 (126)
T d2b33a1 89 EVYSRYFGDHRPARSFVAVAQLP-RNVEIEIEAI 121 (126)
T ss_dssp HHHHHHHTTTCCEEEEEECSCCG-GGCSEEEEEE
T ss_pred HHHHHhhcccccceEEEEeCcCC-CCCEEEEEEE
Confidence 99999999999999999999998 6899999973
No 9
>d1qaha_ d.79.1.1 (A:) 14.5 kda translational inhibitor protein, L-PSP {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00 E-value=1.7e-34 Score=195.98 Aligned_cols=111 Identities=46% Similarity=0.724 Sum_probs=103.7
Q ss_pred cccCCCCcceEEEECCEEEEccccccCCCCCccc-ccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHH
Q psy1836 11 SLVGSASAFQAVQHDNTLYISGVLGIDASSGKMA-EGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVN 89 (127)
Q Consensus 11 ~~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~-~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~ 89 (127)
.+.|.++|||++++|+++|+|||+|.|+.++... +|+++|++++|+|++++|+++|++++||+|+++|++|+++|+.++
T Consensus 13 aP~p~g~Ys~av~~g~~ifvSGq~~~d~~~~~~~~~~i~~Q~~~~~~~i~~vL~~aG~~~~~vv~~~v~~~d~~~~~~~~ 92 (132)
T d1qaha_ 13 APAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVN 92 (132)
T ss_dssp SCCCSSSCCSEEEETTEEEEEEECCBCTTTCSBCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHH
T ss_pred CCCCCCCCcceEEECCEEEEecccCCCccccccccchhhHHHHHHHHHHHHHHHHcCCCcccCceEEEEeCCHHHHHHHH
Confidence 4567789999999999999999999999555544 999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCccEEEEcCCCCCCCEEEEEec
Q psy1836 90 NVYGQFFKPPYPARSTFQVGKLPLIDFCLVVLG 122 (127)
Q Consensus 90 ~v~~~~f~~~~Pa~t~v~V~~L~~~~~liEi~~ 122 (127)
++|.+||++++|+||+++|..|| ++++||||+
T Consensus 93 ~v~~~~~~~~~Part~v~v~~L~-~~~~VEIe~ 124 (132)
T d1qaha_ 93 EIYKTYFQGNLPARAAYQVAALP-KGSRIEIEA 124 (132)
T ss_dssp HHHHTTCCSSCCEEEEEECSCCG-GGCSEEEEE
T ss_pred HHHHHHCCCCCCCeEEEEECcCC-CCCeEEEEE
Confidence 99999999999999999999997 578999997
No 10
>d2ewca1 d.79.1.1 (A:3-122) Hypothetical protein SPy2060 {Streptococcus pyogenes [TaxId: 1314]}
Probab=100.00 E-value=5.9e-33 Score=186.03 Aligned_cols=105 Identities=20% Similarity=0.257 Sum_probs=96.4
Q ss_pred cCCCCcceEEEECCEEEEccccccCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHHHHH
Q psy1836 13 VGSASAFQAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVNNVY 92 (127)
Q Consensus 13 ~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~~v~ 92 (127)
....+||++|++|+++|+||++|..+ +|+++|++++|+||+.+|+++|++++||+|+++|++|+++|+.++++|
T Consensus 8 ~~~~~ys~~V~~G~~i~vsg~~G~v~------~~~~~Q~~~a~~ni~~iL~~aG~~~~dVvkvtvyltd~~~~~~~~~v~ 81 (120)
T d2ewca1 8 NEDRGHTGLVEAGDFYYLNYCVGNVG------QDIESQINGAFDEMERRLALVGLTLDAVVQMDCLFRDVWNIPVMEKMI 81 (120)
T ss_dssp ETTTTEEEEEEETTEEEEEEECCSTT------SCHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESSGGGHHHHHHHH
T ss_pred CCCCCcCCEEEECCEEEECCcccccC------CCHHHHHHHHHHHHHHHHHhccCCHHHheeeeeeeccHHHHHHHHHHH
Confidence 34568999999999999999987655 799999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCccEEEEcCCCC---CCCEEEEEecc
Q psy1836 93 GQFFKPPYPARSTFQVGKLP---LIDFCLVVLGG 123 (127)
Q Consensus 93 ~~~f~~~~Pa~t~v~V~~L~---~~~~liEi~~~ 123 (127)
.+||++++||||+|+|..+. .++++|||++-
T Consensus 82 ~~~f~~~~PArt~v~~~~~~~~~~~g~~vEIdav 115 (120)
T d2ewca1 82 KERFNGRYPARKSIQTEFAHHGGPQGLLFQVDGV 115 (120)
T ss_dssp HHHSTTCCCEEEEEECCCSSCCSTTCCCEEEEEE
T ss_pred HHHcCCCCCcceEEEeeehhccCCCCCEEEEEEE
Confidence 99999999999999998662 36899999973
No 11
>d1pf5a_ d.79.1.1 (A:) Hypothetical protein YjgH {Escherichia coli [TaxId: 562]}
Probab=99.97 E-value=9.6e-32 Score=181.94 Aligned_cols=109 Identities=22% Similarity=0.384 Sum_probs=99.9
Q ss_pred ccCCCCcceEEEECCEEEEccccccCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCC-CHHHHHH
Q psy1836 12 LVGSASAFQAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN-DFATVNN 90 (127)
Q Consensus 12 ~~~~~~ys~av~~g~~v~iSG~~~~d~~~g~~~~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~-~~~~~~~ 90 (127)
+....+|||+|++|++||+|||+|.|+ +|.+++|+++|++++|+|++++|+++|++++||+|+++|++|.. +++.+++
T Consensus 14 ~~~~~~ys~aV~~g~~vfiSGq~~~d~-~~~~~gdi~~Q~~~~l~nl~~~L~~aG~~~~dvv~~~~y~~~~~~~~~~~~~ 92 (130)
T d1pf5a_ 14 LYAEHRYSAAIRSGDLLFVSGQVGSRE-DGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMT 92 (130)
T ss_dssp TTTTTTCCSEEEETTEEEEEEECCBCT-TSCBCSSHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESSGGGTHHHHHH
T ss_pred ccccCCcCCEEEECCEEEEcCcCCCCC-CCcccHHHHHHHHHHHHhhhhhhcccccccccceEEEEEecCcHHHHHHHHH
Confidence 445568999999999999999999999 88888999999999999999999999999999999999999986 5899999
Q ss_pred HHHhhcCCC-CCccEEEEcCCCCCCCEEEEEecc
Q psy1836 91 VYGQFFKPP-YPARSTFQVGKLPLIDFCLVVLGG 123 (127)
Q Consensus 91 v~~~~f~~~-~Pa~t~v~V~~L~~~~~liEi~~~ 123 (127)
+|.++|++. +|+||+++|..|| +++||||+-
T Consensus 93 ~~~~~f~~~~~pa~t~v~v~~Lp--~~~VEIe~i 124 (130)
T d1pf5a_ 93 VKNEIFSAPPYPNWTAVGVTWLA--GFDFEIKVI 124 (130)
T ss_dssp HHHHHSCSSSCCCCEEEECSCST--TCSEEEEEE
T ss_pred HHHHhcCCCCCCCeEEEEeccCC--CceEEEEEE
Confidence 999999765 8999999999997 577888763
No 12
>d2otma1 d.79.1.1 (A:2-153) Hypothetical protein SO1960 {Shewanella oneidensis [TaxId: 70863]}
Probab=99.92 E-value=7.2e-26 Score=156.53 Aligned_cols=113 Identities=16% Similarity=0.080 Sum_probs=95.0
Q ss_pred ccCCCCcceEEEECCEEEEccccccCCCC----Cccc-----ccHHHHHHHHHHHHHHHHHHcCC---CccceEEEEEEe
Q psy1836 12 LVGSASAFQAVQHDNTLYISGVLGIDASS----GKMA-----EGVENQAKQALTNMGHILKEAGG---SYEHVVKTTILL 79 (127)
Q Consensus 12 ~~~~~~ys~av~~g~~v~iSG~~~~d~~~----g~~~-----~d~~~Q~~~~~~ni~~~L~~~G~---~~~~vv~~~vyl 79 (127)
+.|.++|||++++|+++|+|||+|.++.+ |.+. .+.++|++++..|+.+.|+..+. ++.+++++++|+
T Consensus 19 p~p~g~Ys~av~~g~~iyvSGQip~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vv~~~~~v 98 (152)
T d2otma1 19 AAALGNYEPYSIVGSQLMTSGQFPYLQGKLLYQGQLGADYTVSEGYAACRLATLNAIAQLKQACGELSRIKQIYRLEGVL 98 (152)
T ss_dssp CCCSSSSCSEEEETTEEEECCBCCEETTEECCBSCBTTTBCHHHHHHHHHHHHHHHHHHHHHHHSSGGGCCEEEEEEEEE
T ss_pred CCCCCcccceEEECCEEEEecceeecCCCceeeecccchhhhhhHHHHHHHHHHHHHHHHHHhhhcccccccceEEEEEe
Confidence 56889999999999999999999998832 1111 46788999999999999988765 456789999999
Q ss_pred CCCCCH-------HHHHHHHHhhcCCC-CCccEEEEcCCCCCCCEEEEEecccc
Q psy1836 80 NDINDF-------ATVNNVYGQFFKPP-YPARSTFQVGKLPLIDFCLVVLGGHE 125 (127)
Q Consensus 80 ~d~~~~-------~~~~~v~~~~f~~~-~Pa~t~v~V~~L~~~~~liEi~~~~~ 125 (127)
+++++| +.++++|.+||++. +||||+|+|++||.+ ..||||+..+
T Consensus 99 ~~~~~f~~~~~v~n~~s~~~~e~F~e~~~PARt~vgV~~LP~g-a~VEIe~IA~ 151 (152)
T d2otma1 99 NVHQSCIEHPKALDGASDLLLEIFGEAGRHSRMIWTNPVMPLN-SLCLVYLFAE 151 (152)
T ss_dssp CBCTTCCCHHHHHHHHHHHHHHHHGGGGCCEEEEEECSSCGGG-BSEEEEEEEE
T ss_pred ecchhhhhhHHHhhhccHHHHHhcCCCCCCceEEeEcccCCCC-CEEEEEEEEE
Confidence 999987 56889999999975 899999999999984 6799987543
No 13
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}
Probab=60.76 E-value=8.1 Score=24.61 Aligned_cols=47 Identities=15% Similarity=0.270 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHcCCCccceEEEEEEeC-CCCCHHHHHHHHHhhcCCC
Q psy1836 51 AKQALTNMGHILKEAGGSYEHVVKTTILLN-DINDFATVNNVYGQFFKPP 99 (127)
Q Consensus 51 ~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~-d~~~~~~~~~v~~~~f~~~ 99 (127)
...+++-++.+|+.+|...++|-. ++++ .....+.+.+...++|+..
T Consensus 122 ~~~~~~~i~~~l~~~~~~~~~i~~--V~lvGG~sr~p~v~~~i~~~f~~~ 169 (193)
T d1bupa2 122 FRGTLDPVEKALRDAKLDKSQIHD--IVLVGGSTRIPKIQKLLQDFFNGK 169 (193)
T ss_dssp HHHTHHHHHHHHHHHTCCGGGCCE--EEEESGGGGCHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE--EEEECCccccHHHHHHHHHHcCCC
Confidence 445566667888899999888754 4455 5677899999999999754
No 14
>d2hmfa2 d.58.18.10 (A:404-470) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=58.02 E-value=11 Score=20.17 Aligned_cols=45 Identities=9% Similarity=0.252 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHcCCCccceE------EEEEEeCCCCCHHHHHHHHHhhcCC
Q psy1836 54 ALTNMGHILKEAGGSYEHVV------KTTILLNDINDFATVNNVYGQFFKP 98 (127)
Q Consensus 54 ~~~ni~~~L~~~G~~~~~vv------~~~vyl~d~~~~~~~~~v~~~~f~~ 98 (127)
+...+-..|.++|....=|. ++++.+.+-+--..++.++++||.+
T Consensus 17 i~arif~~L~~~~InV~mIsq~~Se~~Is~~V~~~d~~~Av~~Lh~~F~~e 67 (67)
T d2hmfa2 17 IAGKIFTAVSESGANIKMIAQGSSEVNISFVIDEKDLLNCVRKLHEKFIEK 67 (67)
T ss_dssp HHHHHHHHHHHTTCCCCEEEESSCSSEEEEEEEGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCChHHeeecCccceEEEEEeHHHHHHHHHHHHHHHhcC
Confidence 45567778888887766554 6777776666667888899999863
No 15
>d1qnaa1 d.129.1.1 (A:17-115) TATA-box binding protein (TBP), C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=56.38 E-value=6.1 Score=23.18 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCC
Q psy1836 47 VENQAKQALTNMGHILKEAGGS 68 (127)
Q Consensus 47 ~~~Q~~~~~~ni~~~L~~~G~~ 68 (127)
-+++++.+++++...|+..|..
T Consensus 70 s~~~~~~a~~~i~~~l~k~g~~ 91 (99)
T d1qnaa1 70 SEDFSKMAARKYARIVQKLGFP 91 (99)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999975
No 16
>d1aisa1 d.129.1.1 (A:1-92) TATA-box binding protein (TBP), C-terminal domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=53.45 E-value=2.8 Score=24.40 Aligned_cols=21 Identities=19% Similarity=0.295 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCC
Q psy1836 47 VENQAKQALTNMGHILKEAGG 67 (127)
Q Consensus 47 ~~~Q~~~~~~ni~~~L~~~G~ 67 (127)
-.++++.+++++...|++.|.
T Consensus 72 S~~~~~~a~~~i~~~l~~lGv 92 (92)
T d1aisa1 72 SVQDIERAVAKLAQKLKSIGV 92 (92)
T ss_dssp SHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHcCC
Confidence 457899999999999999884
No 17
>d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]}
Probab=50.15 E-value=18 Score=21.32 Aligned_cols=59 Identities=8% Similarity=0.153 Sum_probs=36.6
Q ss_pred CCCcceEEE-E---CCEEEEccccccCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEe
Q psy1836 15 SASAFQAVQ-H---DNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79 (127)
Q Consensus 15 ~~~ys~av~-~---g~~v~iSG~~~~d~~~g~~~~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl 79 (127)
..|++++.. . +++++++|-+..... -|+++-+|.+++.|--.=.+.|.+.+. +++.+++
T Consensus 33 ~Dp~sRVA~Et~~~~~~v~v~GEits~~~-----vd~~~ivR~~i~~IGY~~~~~gfd~~~-~~V~~~i 95 (102)
T d1mxaa1 33 QDPKARVACETYVKTGMVLVGGEITTSAW-----VDIEEITRNTVREIGYVHSDMGFDANS-CAVLSAI 95 (102)
T ss_dssp TCTTCEEEEEEEEETTEEEEEEEEECSCC-----CCHHHHHHHHHHHHTCEEGGGTEETTT-SEEEEEE
T ss_pred hCCccceEEEEEEcCCcEEEEEeeccccc-----ccHHHHHHHHHHHhcccccccccccCc-eEEEEec
Confidence 356776543 2 899999999865442 578888887777664443444544444 3444444
No 18
>d1mp9a1 d.129.1.1 (A:5-96) TATA-box binding protein (TBP), C-terminal domain {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=48.13 E-value=4.9 Score=23.22 Aligned_cols=21 Identities=19% Similarity=0.207 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCC
Q psy1836 47 VENQAKQALTNMGHILKEAGG 67 (127)
Q Consensus 47 ~~~Q~~~~~~ni~~~L~~~G~ 67 (127)
-.++++.+++++...|++.|.
T Consensus 72 s~~~~~~a~~~~~~~L~~~G~ 92 (92)
T d1mp9a1 72 STDELIKAVKRIIKTLKKYGM 92 (92)
T ss_dssp SHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHcCC
Confidence 457899999999999999884
No 19
>d2otaa1 a.284.1.1 (A:7-68) Hypothetical protein CPS2611 {Colwellia psychrerythraea [TaxId: 28229]}
Probab=46.51 E-value=9.2 Score=20.64 Aligned_cols=23 Identities=4% Similarity=0.186 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcc
Q psy1836 48 ENQAKQALTNMGHILKEAGGSYE 70 (127)
Q Consensus 48 ~~Q~~~~~~ni~~~L~~~G~~~~ 70 (127)
.+|+++++..+-.+|+++..+.+
T Consensus 3 ~~qvE~il~eli~vLeKh~Ap~D 25 (62)
T d2otaa1 3 NERVEKIIQDLLDVLVKEEVTPD 25 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 37999999999999999988654
No 20
>d2qtia1 a.284.1.1 (A:8-72) Uncharacterized protein SO2176 {Shewanella oneidensis [TaxId: 70863]}
Probab=44.49 E-value=9.6 Score=20.76 Aligned_cols=23 Identities=9% Similarity=0.206 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcc
Q psy1836 48 ENQAKQALTNMGHILKEAGGSYE 70 (127)
Q Consensus 48 ~~Q~~~~~~ni~~~L~~~G~~~~ 70 (127)
.+|+++++..+-.+|+.+..+.+
T Consensus 2 ~~qvE~il~el~~vLeKH~Ap~D 24 (65)
T d2qtia1 2 NTQVESLIAEILVVLEKHKAPTD 24 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHH
T ss_pred cHHHHHHHHHHHHHHHhcCCCch
Confidence 37999999999999999988643
No 21
>d2juza1 a.284.1.1 (A:1-72) Uncharacterized protein HI0840 {Haemophilus influenzae [TaxId: 727]}
Probab=42.32 E-value=12 Score=20.75 Aligned_cols=23 Identities=13% Similarity=0.242 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcc
Q psy1836 48 ENQAKQALTNMGHILKEAGGSYE 70 (127)
Q Consensus 48 ~~Q~~~~~~ni~~~L~~~G~~~~ 70 (127)
.+|+++++..+-.+|+.+..+.+
T Consensus 9 ~~qvE~il~el~~vLeKh~Ap~D 31 (72)
T d2juza1 9 DAQLSAIVNDMIAVLEKHKAPVD 31 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 37999999999999999988654
No 22
>d2jrxa1 a.284.1.1 (A:1-75) Uncharacterized protein YejL {Escherichia coli [TaxId: 562]}
Probab=39.70 E-value=12 Score=20.89 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcc
Q psy1836 48 ENQAKQALTNMGHILKEAGGSYE 70 (127)
Q Consensus 48 ~~Q~~~~~~ni~~~L~~~G~~~~ 70 (127)
.+|+++++..+-.+|+.+..+.+
T Consensus 9 ~~qvE~il~el~~vLeKh~Ap~D 31 (75)
T d2jrxa1 9 DEQVEQLLAELLNVLEKHKAPTD 31 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 47999999999999999988654
No 23
>d2jpqa1 a.284.1.1 (A:1-75) Hypothetical protein VP2129 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=39.60 E-value=13 Score=20.75 Aligned_cols=23 Identities=22% Similarity=0.384 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcc
Q psy1836 48 ENQAKQALTNMGHILKEAGGSYE 70 (127)
Q Consensus 48 ~~Q~~~~~~ni~~~L~~~G~~~~ 70 (127)
.+|+++++..+-.+|+.+..+.+
T Consensus 9 ~~qvE~il~el~~vLeKh~Ap~D 31 (75)
T d2jpqa1 9 DEQVEKILAEVALVLEKHAASPE 31 (75)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 37999999999999999988654
No 24
>d1xhja_ d.52.8.1 (A:) Nitrogen fixation protein NifU homolog SE0630 {Staphylococcus epidermidis [TaxId: 1282]}
Probab=38.20 E-value=13 Score=21.26 Aligned_cols=26 Identities=15% Similarity=0.288 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHcCCCcc
Q psy1836 45 EGVENQAKQALTNMGHILKEAGGSYE 70 (127)
Q Consensus 45 ~d~~~Q~~~~~~ni~~~L~~~G~~~~ 70 (127)
..+.++++.+++.|+=.|+..|++.+
T Consensus 6 ~~l~~~I~~vLe~IRP~l~~dGGdve 31 (88)
T d1xhja_ 6 PTMFDQVAEVIERLRPFLLRDGGDCT 31 (88)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSCEEE
T ss_pred HHHHHHHHHHHHHhhHHHHhCCCcEE
Confidence 47889999999999999999998655
No 25
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=36.01 E-value=29 Score=22.01 Aligned_cols=52 Identities=17% Similarity=0.292 Sum_probs=36.9
Q ss_pred ccHHHHHHHHHHH----HHHHHHHcCCCccceEEEEEEeC-CCCCHHHHHHHHHhhcCC
Q psy1836 45 EGVENQAKQALTN----MGHILKEAGGSYEHVVKTTILLN-DINDFATVNNVYGQFFKP 98 (127)
Q Consensus 45 ~d~~~Q~~~~~~n----i~~~L~~~G~~~~~vv~~~vyl~-d~~~~~~~~~v~~~~f~~ 98 (127)
+++++-++..+++ +..+|+.++.+.++|-. ++++ .....+.+.+...++|+.
T Consensus 118 ~~~~~~~~~~~~~~~~~i~~~l~~a~~~~~~Id~--v~lvGG~sr~p~l~~~i~~~f~~ 174 (198)
T d1dkgd2 118 AKLESLVEDLVNRSIELLKVALQDAGLSVSDIDD--VILVGGQTRMPMVQKKVAEFFGK 174 (198)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCE--EEEESGGGGSHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHCcE--EEEEcCccCCHHHHHHHHHHHCC
Confidence 5566555544444 55667888999888655 4454 557889999999999975
No 26
>d2p02a1 d.130.1.1 (A:38-147) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]}
Probab=35.36 E-value=40 Score=19.92 Aligned_cols=60 Identities=12% Similarity=0.200 Sum_probs=32.6
Q ss_pred CCcceEEE-E---CCEEEEccccccCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCC
Q psy1836 16 ASAFQAVQ-H---DNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLND 81 (127)
Q Consensus 16 ~~ys~av~-~---g~~v~iSG~~~~d~~~g~~~~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d 81 (127)
.|++++.. . +++++++|-+..... -|+++-+|.+++.|---=.+.|.+++. +.+.+.+..
T Consensus 34 Dp~arVA~Et~v~~~~V~v~GEitt~~~-----vd~~~IvR~vi~~IGY~~~~~gfd~~t-~~V~~~I~~ 97 (110)
T d2p02a1 34 DPDAKVACETVAKTGMILLAGEITSRAA-----VDYQKVVREAVKHIGYDDSSKGFDYKT-CNVLVALEQ 97 (110)
T ss_dssp CTTCEEEEEEEEETTEEEEEEEEECSCC-----CCHHHHHHHHHHHHTCEEGGGTEETTT-SEEEEEEEC
T ss_pred CcccceeEEEEecCCEEEEEEEeccccc-----ccHHHHHHHhhhccCEecCcCCccccc-eEEEeeccC
Confidence 45565432 2 899999998866542 477765555555542222223333433 345555543
No 27
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=32.76 E-value=23 Score=21.76 Aligned_cols=44 Identities=7% Similarity=-0.115 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHHHHHHh
Q psy1836 48 ENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVNNVYGQ 94 (127)
Q Consensus 48 ~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~~v~~~ 94 (127)
+.-++.+-+.|+.+|+++|.+.+||-.+ +.......-+..+.++
T Consensus 44 ~~a~~~v~~~i~~~L~~~gl~~~dId~~---i~Hqa~~~i~~~v~~~ 87 (148)
T d1u6ea2 44 RWAAFKMGDVGRRAMDAAGVRPDQIDVF---VPHQANSRINELLVKN 87 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCCEE---EECCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccccEE---EeccccHHHHHHHHHh
Confidence 3344677778899999999999998553 3344444444444443
No 28
>d1otfa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase {Pseudomonas sp., DmpI [TaxId: 306]}
Probab=32.58 E-value=30 Score=17.59 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCccceEEEEEEeCCCCCH
Q psy1836 48 ENQAKQALTNMGHILKE-AGGSYEHVVKTTILLNDINDF 85 (127)
Q Consensus 48 ~~Q~~~~~~ni~~~L~~-~G~~~~~vv~~~vyl~d~~~~ 85 (127)
.+|-+...+.+-..+.+ .|...++| .+.+.=...++|
T Consensus 13 ~eqK~~l~~~it~~~~~~~g~~~~~v-~V~i~E~~~~nw 50 (59)
T d1otfa_ 13 DEQKETLIRQVSEAMANSLDAPLERV-RVLITEMPKNHF 50 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGC-EEEEEEECGGGE
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcccE-EEEEEEeChhhE
Confidence 47888999999999866 59998886 555554444444
No 29
>d1px5a2 d.218.1.6 (A:1-200) 2'-5'-oligoadenylate synthetase 1, OAS1, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=30.88 E-value=51 Score=21.50 Aligned_cols=41 Identities=22% Similarity=0.315 Sum_probs=31.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHc-------CCCccce-----------------EEEEEEeCCCCCH
Q psy1836 45 EGVENQAKQALTNMGHILKEA-------GGSYEHV-----------------VKTTILLNDINDF 85 (127)
Q Consensus 45 ~d~~~Q~~~~~~ni~~~L~~~-------G~~~~~v-----------------v~~~vyl~d~~~~ 85 (127)
.++.+|++.+.+.|...|++. ......| +.+.+|+.+...|
T Consensus 23 ~~f~~~~~~avd~i~~fLke~cf~~~~~~v~V~kVvKGGS~gkGTaLr~~SDvDlVvFls~l~sf 87 (200)
T d1px5a2 23 TCFRTQVKEAIDIVCRFLKERCFQGTADPVRVSKVVKGGSSGKGTTLRGRSDADLVVFLTKLTSF 87 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEEEEEC--------CEEEEEEEEEESCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCceEEEEEeccccCCCcccCCCCcceEEEEecCCCch
Confidence 689999999999999999973 2233333 3578899987765
No 30
>d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]}
Probab=30.16 E-value=45 Score=18.91 Aligned_cols=72 Identities=13% Similarity=0.088 Sum_probs=41.7
Q ss_pred ceEEEE--CCEEEEccccccCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCC--CCHHHHHHHHHh
Q psy1836 19 FQAVQH--DNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDI--NDFATVNNVYGQ 94 (127)
Q Consensus 19 s~av~~--g~~v~iSG~~~~d~~~g~~~~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~--~~~~~~~~v~~~ 94 (127)
..++.. |+.+.-.-..|.+|. ..-.+++++.+++ .++++.....++|.++.+|+.-. ++...+.+.+.+
T Consensus 12 T~~vl~d~g~~i~~~~t~g~Np~-----~~~~~~~~~~l~~--~~~~~l~~~~~~i~~i~~g~AG~~~~~~~~i~~~l~~ 84 (107)
T d1zbsa2 12 TDWCIAKEGKSLGRFQTSGINPF-----QQDRNEIDTALRS--EVLPAIGQKASSIRAVYFYGAGCTPAKAPMLNEALDS 84 (107)
T ss_dssp EEEEEEETTEEEEEEEEECCCTT-----TSCHHHHHHHHTT--TTHHHHTTSTTTCCEEEEEETTCCTTTHHHHHHHHHH
T ss_pred EEEEEECCCCeEEEEecCCcCcc-----cCCHHHHHHHHHH--HHHHHHhccccCCcEEEEEecCCCchhhHHHHHHHHH
Confidence 344444 455544333456662 1223444444432 33455566778999999999954 455666667777
Q ss_pred hcC
Q psy1836 95 FFK 97 (127)
Q Consensus 95 ~f~ 97 (127)
.|+
T Consensus 85 ~~~ 87 (107)
T d1zbsa2 85 MLP 87 (107)
T ss_dssp HST
T ss_pred HCC
Confidence 764
No 31
>d2qalf1 d.58.14.1 (F:1-100) Ribosomal protein S6 {Escherichia coli [TaxId: 562]}
Probab=29.66 E-value=17 Score=20.78 Aligned_cols=26 Identities=12% Similarity=0.143 Sum_probs=21.4
Q ss_pred cHHHHHHHHHHHHHHHHHHcCCCccc
Q psy1836 46 GVENQAKQALTNMGHILKEAGGSYEH 71 (127)
Q Consensus 46 d~~~Q~~~~~~ni~~~L~~~G~~~~~ 71 (127)
+..+|....++++..++.+.|+...+
T Consensus 13 ~~~e~~~~~~~~~~~~i~~~gg~v~~ 38 (100)
T d2qalf1 13 DQSEQVPGMIERYTAAITGAEGKIHR 38 (100)
T ss_dssp GGTTHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CcHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 45568899999999999999986543
No 32
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}
Probab=29.10 E-value=28 Score=21.19 Aligned_cols=25 Identities=16% Similarity=0.048 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHcCCCccceEEE
Q psy1836 51 AKQALTNMGHILKEAGGSYEHVVKT 75 (127)
Q Consensus 51 ~~~~~~ni~~~L~~~G~~~~~vv~~ 75 (127)
++.+-+-++.+|+++|.+++||=.+
T Consensus 46 ~~~vp~~i~~~L~~~g~~~~dId~~ 70 (149)
T d1ub7a2 46 VRVMNTATLEAIEKAGLTPEDIRLF 70 (149)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred HHHHHHHHHHHHHhhccccccccEE
Confidence 4555578899999999999997554
No 33
>d1xhoa_ d.79.1.2 (A:) Chorismate mutase {Clostridium thermocellum [TaxId: 1515]}
Probab=27.06 E-value=59 Score=19.27 Aligned_cols=42 Identities=7% Similarity=0.260 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeC-CC-CCHHHH
Q psy1836 47 VENQAKQALTNMGHILKEAGGSYEHVVKTTILLN-DI-NDFATV 88 (127)
Q Consensus 47 ~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~-d~-~~~~~~ 88 (127)
.++=.+.+-+=++.++++.+.+.+||+++..-+| |+ +.||+.
T Consensus 15 ~e~I~~at~eLl~~ii~~N~l~~edi~Sv~FT~T~DL~a~FPA~ 58 (112)
T d1xhoa_ 15 ADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVTKDLDAAFPAI 58 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECTTCCSSCTHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccCCHH
Confidence 3333444555667889999999999999998888 45 468864
No 34
>d1mp9a2 d.129.1.1 (A:97-197) TATA-box binding protein (TBP), C-terminal domain {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=27.05 E-value=13 Score=21.65 Aligned_cols=22 Identities=18% Similarity=0.155 Sum_probs=18.6
Q ss_pred cHHHHHHHHHHHHHHHHHHcCC
Q psy1836 46 GVENQAKQALTNMGHILKEAGG 67 (127)
Q Consensus 46 d~~~Q~~~~~~ni~~~L~~~G~ 67 (127)
.-.++++.+++++..+|.+.|.
T Consensus 70 ks~~~~~~a~~~i~~~L~~~~~ 91 (101)
T d1mp9a2 70 KREDEVHKAVKKIFDKLVELDC 91 (101)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHhCC
Confidence 3457899999999999998875
No 35
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=26.43 E-value=36 Score=20.55 Aligned_cols=27 Identities=4% Similarity=-0.133 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCccceEEE
Q psy1836 49 NQAKQALTNMGHILKEAGGSYEHVVKT 75 (127)
Q Consensus 49 ~Q~~~~~~ni~~~L~~~G~~~~~vv~~ 75 (127)
.-++.+-+-++.+|+++|.+.+||-.+
T Consensus 41 ~av~~~~~~i~~~L~~~g~~~~dId~~ 67 (143)
T d1hnja2 41 VAVTELAHIVDETLAANNLDRSQLDWL 67 (143)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEE
T ss_pred hhhhhhhHHHHHHHHHhhhcccccceE
Confidence 345666778889999999999998654
No 36
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}
Probab=26.24 E-value=31 Score=21.20 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHcCCCccceEEEE
Q psy1836 51 AKQALTNMGHILKEAGGSYEHVVKTT 76 (127)
Q Consensus 51 ~~~~~~ni~~~L~~~G~~~~~vv~~~ 76 (127)
++.+-+.++.+|+++|.+.+||-.+-
T Consensus 47 v~~vp~~i~~~L~~~gl~~~dId~~i 72 (153)
T d1mzja2 47 VADVVPAAREALEVAGLTVGDLVAFV 72 (153)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHhCCCcccCCEEE
Confidence 46677788899999999999986553
No 37
>d1veha_ d.52.8.1 (A:) HIRA-interacting protein 5, HIRIP5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.21 E-value=54 Score=18.55 Aligned_cols=54 Identities=15% Similarity=0.156 Sum_probs=36.1
Q ss_pred ccHHHHHHHHHHH-HHHHHHHcCCCcc--ceEEEEEEeCCCC-----------CHHHHHHHHHhhcCC
Q psy1836 45 EGVENQAKQALTN-MGHILKEAGGSYE--HVVKTTILLNDIN-----------DFATVNNVYGQFFKP 98 (127)
Q Consensus 45 ~d~~~Q~~~~~~n-i~~~L~~~G~~~~--~vv~~~vyl~d~~-----------~~~~~~~v~~~~f~~ 98 (127)
.++.+.++.+++. |+-.|++.|++.+ ++-.=.+|+.=.- -...+.+..+++++.
T Consensus 12 ~e~~~~I~~vL~~~IrP~l~~dGGdv~lv~v~~g~V~v~l~GaC~gCp~s~~Tlk~~Ie~~L~~~vpe 79 (92)
T d1veha_ 12 DEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 79 (92)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHSCCCCEEEEETTEEEECCCCCCCCCHHHHHHTHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHhcChHHHHcCCceEEEEeeCCeEEEEEccCCCCChhHHHHHHHHHHHHHHHHCCC
Confidence 6799999999985 9999999999764 2222234443211 125667777777764
No 38
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.02 E-value=38 Score=21.48 Aligned_cols=28 Identities=14% Similarity=-0.098 Sum_probs=23.3
Q ss_pred HHHHHHHHhhcCCCCCccEEEE-cCCCCC
Q psy1836 86 ATVNNVYGQFFKPPYPARSTFQ-VGKLPL 113 (127)
Q Consensus 86 ~~~~~v~~~~f~~~~Pa~t~v~-V~~L~~ 113 (127)
+.++++.++||.+..|+-+++| +..||.
T Consensus 177 ~dv~~vA~kyl~~~~~~v~~vG~~~~lp~ 205 (218)
T d3cx5a2 177 KDVKAWAGKRLWDQDIAIAGTGQIEGLLD 205 (218)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEESCTTSCC
T ss_pred HHHHHHHHHHhccCCCEEEEEcChhhCCC
Confidence 6788889999999999999998 556664
No 39
>d1qnaa2 d.129.1.1 (A:116-198) TATA-box binding protein (TBP), C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=25.38 E-value=13 Score=20.81 Aligned_cols=19 Identities=21% Similarity=0.350 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHc
Q psy1836 47 VENQAKQALTNMGHILKEA 65 (127)
Q Consensus 47 ~~~Q~~~~~~ni~~~L~~~ 65 (127)
-+++++.++++|..+|++.
T Consensus 62 s~~~~~~a~~~i~~~L~~~ 80 (83)
T d1qnaa2 62 MRDETYKAFENIYPVLSEF 80 (83)
T ss_dssp SHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 3578889999999888764
No 40
>d1r2za1 a.156.1.2 (A:135-228) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=24.92 E-value=14 Score=21.22 Aligned_cols=41 Identities=15% Similarity=0.308 Sum_probs=23.8
Q ss_pred EEEEccccccCCCCCcccccHHHHHHHHHHHHHHHHHH----cCCCccc
Q psy1836 27 TLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKE----AGGSYEH 71 (127)
Q Consensus 27 ~v~iSG~~~~d~~~g~~~~d~~~Q~~~~~~ni~~~L~~----~G~~~~~ 71 (127)
.+|-+|.-|..+ .+.+. ++|.+..++.+..+|+. .|.++.|
T Consensus 46 iLf~a~I~P~~~-~~~Ls---~~e~~~L~~~~~~vl~~ai~~gG~t~~d 90 (94)
T d1r2za1 46 SLFRAGILPGRP-AASLS---SKEIERLHEEMVATIGEAVMKGGSTVRT 90 (94)
T ss_dssp HHHHHTCCTTSB-GGGCC---HHHHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred HHHHHHhhhhhh-HHHhh---HHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 355566555544 33333 25666777777666654 4777766
No 41
>d2cdqa3 d.58.18.10 (A:420-494) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.06 E-value=51 Score=17.73 Aligned_cols=48 Identities=17% Similarity=0.268 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHcCCCccceE------EEEEEeCCCCCHHHHHHHHHhhcCCC
Q psy1836 52 KQALTNMGHILKEAGGSYEHVV------KTTILLNDINDFATVNNVYGQFFKPP 99 (127)
Q Consensus 52 ~~~~~ni~~~L~~~G~~~~~vv------~~~vyl~d~~~~~~~~~v~~~~f~~~ 99 (127)
.-+..++-..|.++|....=|. ++++.+.+-+--..++.++.+||.+.
T Consensus 14 ~Giaarif~aL~~~~InV~mIsqg~se~~Is~vV~~~d~~~Av~~Lh~~f~~~~ 67 (75)
T d2cdqa3 14 SLILERAFHVLYTKGVNVQMISQGASKVNISFIVNEAEAEGCVQALHKSFFESG 67 (75)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEECTTCSEEEEEEEHHHHHHHHHHHHHHHHSSC
T ss_pred hhHHHHHHHHHHHcCCceEEEEcCccceEEEEEEeHHHHHHHHHHHHHHHhcCC
Confidence 3477888889999887666555 45555544444567788888888754
No 42
>d1pjra2 c.37.1.19 (A:319-651) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=23.53 E-value=83 Score=20.49 Aligned_cols=47 Identities=6% Similarity=0.112 Sum_probs=34.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHHHHHHh
Q psy1836 45 EGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVNNVYGQ 94 (127)
Q Consensus 45 ~d~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~~v~~~ 94 (127)
.+-.+|++.+-+.|..++++.+..++||+ |.++.-++...+.+.+.+
T Consensus 9 ~~~~~Ea~~Ia~~I~~li~~g~~~~~DIA---ILvRt~~~~~~i~~~L~~ 55 (333)
T d1pjra2 9 MNEADEAQFVAGRIREAVERGERRYRDFA---VLYRTNAQSRVMEEMLLK 55 (333)
T ss_dssp EEHHHHHHHHHHHHHHHHTTTSCCGGGEE---EEESSGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCcCCEE---EEEECcHhHHHHHHHHHH
Confidence 46778999999999999988778899975 335555556666555554
No 43
>d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]}
Probab=23.19 E-value=22 Score=20.33 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHH
Q psy1836 49 NQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVN 89 (127)
Q Consensus 49 ~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~ 89 (127)
...+..+..|+.+|++++.+++|| +.-++-.....|..++
T Consensus 32 ~hs~~l~~~i~~~l~~~~~~~~di-~~i~v~~GPGsfTglR 71 (103)
T d2a6aa1 32 KHAEILPVVVKKLLDELDLKVKDL-DVVGVGIGPGGLTGLR 71 (103)
T ss_dssp GGGGHHHHHHHHHHHHHTCCGGGC-SEEEEECCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHh-HHHhhcCCCCcchhHH
Confidence 456678888999999999999997 5556666777776544
No 44
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.44 E-value=56 Score=20.25 Aligned_cols=28 Identities=29% Similarity=0.530 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhcCCCCCccEEEE-cCCCC
Q psy1836 85 FATVNNVYGQFFKPPYPARSTFQ-VGKLP 112 (127)
Q Consensus 85 ~~~~~~v~~~~f~~~~Pa~t~v~-V~~L~ 112 (127)
.+.++++.++||.+..++-+.+| +..||
T Consensus 171 ~edv~~va~ky~~~~~~~v~~vG~~~~lp 199 (209)
T d1ppja2 171 ARVVREVCSKYFYDQCPAVAGFGPIEQLP 199 (209)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEESCTTSC
T ss_pred HHHHHHHHHHHcCCCCCEEEEEcChhhCC
Confidence 47899999999998888888887 34454
No 45
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.11 E-value=53 Score=17.00 Aligned_cols=43 Identities=19% Similarity=0.275 Sum_probs=31.7
Q ss_pred HHHHHHHHHHcCCCc-----cceEEEEEEeCCCCCHHHHHHHHHhhcCC
Q psy1836 55 LTNMGHILKEAGGSY-----EHVVKTTILLNDINDFATVNNVYGQFFKP 98 (127)
Q Consensus 55 ~~ni~~~L~~~G~~~-----~~vv~~~vyl~d~~~~~~~~~v~~~~f~~ 98 (127)
+..++..|++.|... .+-|.+++++ ..+..+.+.+-..+...+
T Consensus 14 ~~~v~~~L~~~~~~i~~~~y~~~V~l~v~v-p~~~~~~f~~~l~d~t~G 61 (71)
T d1vi7a2 14 LTGIEALLGQCDGKIINSDYQAFVLLRVAL-PAAKVAEFSAKLADFSRG 61 (71)
T ss_dssp HHHHHHHHHHTTCEEEEEEESSSEEEEEEE-CSSTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCEEEeeeeccEEEEEEEE-CHHHHHHHHHHHHHhCCC
Confidence 567889999998754 4567888887 556778887777776654
No 46
>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}
Probab=21.78 E-value=23 Score=20.40 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHcCCCccceEEEEEEeCCCCCHHHHH
Q psy1836 50 QAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVN 89 (127)
Q Consensus 50 Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~d~~~~~~~~ 89 (127)
+.+..+..++.+|+++|.+++||-. -++-+....|..++
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~di~~-i~v~~GPGsfTglR 71 (106)
T d1okja1 33 HTQRILPMVQDILTTSGTSLTDINA-LAYGRGPGSFTGVR 71 (106)
T ss_dssp TTTTHHHHHHHHHHHTTCCGGGCCE-EEEEEESSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcceeeeE-EEEeeccCccccch
Confidence 4566778899999999999999744 44455666665443
No 47
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}
Probab=21.77 E-value=30 Score=21.10 Aligned_cols=26 Identities=8% Similarity=-0.027 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHcCCCccceEEEE
Q psy1836 51 AKQALTNMGHILKEAGGSYEHVVKTT 76 (127)
Q Consensus 51 ~~~~~~ni~~~L~~~G~~~~~vv~~~ 76 (127)
++.+...++.+|+++|.+++||-..-
T Consensus 42 i~~~~~~i~~~l~~~g~~~~did~~~ 67 (148)
T d1u0ma2 42 MEPLAPALKELAGEHGWDASDLDFYI 67 (148)
T ss_dssp HHHHHHHHHHHHHTTSCCSSCCSCCE
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEE
Confidence 45677888999999999999986543
No 48
>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]}
Probab=21.29 E-value=62 Score=17.42 Aligned_cols=40 Identities=13% Similarity=0.101 Sum_probs=28.7
Q ss_pred EEEECCEEEEccccccCCCCCcccccHHHHHHHHHHHHHHHHHHcC
Q psy1836 21 AVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAG 66 (127)
Q Consensus 21 av~~g~~v~iSG~~~~d~~~g~~~~d~~~Q~~~~~~ni~~~L~~~G 66 (127)
+.++|+.+|+.=.+-.++ +- ++ .|+..+-+.++..|++.=
T Consensus 30 ~r~~G~~~~vd~hi~v~~-~~----sv-~~aH~i~~~ve~~i~~~~ 69 (82)
T d3bypa1 30 TRRAGPRSFLEFHLVVRG-DT----PV-EEAHRLCDELERALAQAF 69 (82)
T ss_dssp EEEETTEEEEEEEEEECT-TC----BH-HHHHHHHHHHHHHHHHHS
T ss_pred eeEECCEEEEEEEEEECC-CC----CH-HHHHHHHHHHHHHHHhhC
Confidence 445599999999999987 32 23 577777777777776653
No 49
>d1dbfa_ d.79.1.2 (A:) Chorismate mutase {Bacillus subtilis [TaxId: 1423]}
Probab=21.12 E-value=85 Score=18.96 Aligned_cols=59 Identities=15% Similarity=0.124 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccceEEEEEEeC-CC-CCHHHHHHHHHhhcCC-CCCccEEEE
Q psy1836 47 VENQAKQALTNMGHILKEAGGSYEHVVKTTILLN-DI-NDFATVNNVYGQFFKP-PYPARSTFQ 107 (127)
Q Consensus 47 ~~~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vyl~-d~-~~~~~~~~v~~~~f~~-~~Pa~t~v~ 107 (127)
-++=.+.+-+=++.++++.+.+.+||+++..-+| |+ +.||+.. .++..|= .-|...+.+
T Consensus 17 ~e~I~~at~eLl~~ii~~N~l~~ediiSv~FT~T~DL~a~FPA~a--aR~~~G~~~Vplmc~~E 78 (127)
T d1dbfa_ 17 EEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKA--VRELSGWQYVPVTCMQE 78 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEECTTCCSSCTHHH--HHTSTTCTTSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecccccccCcHHH--HHhcCCCCccchhcccC
Confidence 3333444455667889999999999999988888 44 3576542 3344332 245444443
No 50
>d2d0oa2 c.55.1.6 (A:1-92,A:255-403) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]}
Probab=21.07 E-value=66 Score=21.51 Aligned_cols=30 Identities=10% Similarity=0.052 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEEE
Q psy1836 49 NQAKQALTNMGHILKEAGGSYEHVVKTTIL 78 (127)
Q Consensus 49 ~Q~~~~~~ni~~~L~~~G~~~~~vv~~~vy 78 (127)
+-+.-+++.|...|+.+|.+++||-.+++-
T Consensus 45 ~Ni~Gv~~aL~~al~k~g~~~~d~~lIriN 74 (241)
T d2d0oa2 45 RNVFGIQEALALVARGAGIAVSDISLIRIN 74 (241)
T ss_dssp THHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhheeeec
Confidence 456678889999999999999998777664
No 51
>d2hgka1 a.29.17.1 (A:1-109) Hypothetical protein YqcC {Escherichia coli [TaxId: 562]}
Probab=21.05 E-value=49 Score=19.48 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCC------CccceEEEEEEeCCCCC
Q psy1836 47 VENQAKQALTNMGHILKEAGG------SYEHVVKTTILLNDIND 84 (127)
Q Consensus 47 ~~~Q~~~~~~ni~~~L~~~G~------~~~~vv~~~vyl~d~~~ 84 (127)
...|+++-+..|+..|+..|. +.+...+..=|..|.=.
T Consensus 3 ~~~~v~~~L~~LE~~Lr~~~lW~~~~Ps~eAl~S~~PF~~DTl~ 46 (109)
T d2hgka1 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTME 46 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCCGGGTTTCCSSCTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCHHHhcCCCCcccccCC
Confidence 568999999999999999996 33444444445555433
No 52
>d1gkab_ b.60.1.1 (B:) Alpha-crustacyanin {European lobster (Homarus gammarus) [TaxId: 6707]}
Probab=20.42 E-value=34 Score=20.58 Aligned_cols=22 Identities=14% Similarity=0.351 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHcCCCccceEEE
Q psy1836 54 ALTNMGHILKEAGGSYEHVVKT 75 (127)
Q Consensus 54 ~~~ni~~~L~~~G~~~~~vv~~ 75 (127)
.++.+.+.|++.|.++++++.+
T Consensus 143 ~~~~~~~~~~~~g~~~~~l~~~ 164 (174)
T d1gkab_ 143 AVEKTAAVFNKNGVEFSKFVPV 164 (174)
T ss_dssp HHHHHHHHHHHHTCCGGGCEEC
T ss_pred HHHHHHHHHHHcCCCHHHeEEC
Confidence 3567778889999999998764
No 53
>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}
Probab=20.01 E-value=42 Score=20.57 Aligned_cols=44 Identities=14% Similarity=0.031 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCCCccceEEEEEEeCCCC--CHHHHHHHHHhhcCCC
Q psy1836 55 LTNMGHILKEAGGSYEHVVKTTILLNDIN--DFATVNNVYGQFFKPP 99 (127)
Q Consensus 55 ~~ni~~~L~~~G~~~~~vv~~~vyl~d~~--~~~~~~~v~~~~f~~~ 99 (127)
.+.++.+|+.+|.+.+||-.+...=+... |-.+++.+ ++.|++.
T Consensus 29 ~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai-~~~fg~~ 74 (158)
T d1ox0a2 29 IKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAI-VAVLGKE 74 (158)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHH-HHHHCSS
T ss_pred HHHHHHhhccccccceeeeEEeeeccccccchhHHHHHH-HHhcCCc
Confidence 34688899999999999987777666543 33333333 3445544
Done!