Your job contains 1 sequence.
>psy1836
MCLMLHASLVSLVGSASAFQAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGH
ILKEAGGSYEHVVKTTILLNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPLIDFCLVV
LGGHETL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1836
(127 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040718-315 - symbol:hrsp12 "heat-responsive... 284 5.9e-25 1
UNIPROTKB|H0YB34 - symbol:HRSP12 "Ribonuclease UK114" spe... 272 1.1e-23 1
UNIPROTKB|P52758 - symbol:HRSP12 "Ribonuclease UK114" spe... 272 1.1e-23 1
UNIPROTKB|F1S0M2 - symbol:HRSP12 "Uncharacterized protein... 272 1.1e-23 1
UNIPROTKB|Q3T114 - symbol:HRSP12 "Ribonuclease UK114" spe... 269 2.3e-23 1
MGI|MGI:1095401 - symbol:Hrsp12 "heat-responsive protein ... 260 2.1e-22 1
TAIR|locus:2092374 - symbol:AT3G20390 "AT3G20390" species... 258 3.4e-22 1
RGD|70940 - symbol:Hrsp12 "heat-responsive protein 12" sp... 254 9.0e-22 1
UNIPROTKB|E1C7E1 - symbol:HRSP12 "Uncharacterized protein... 245 8.0e-21 1
FB|FBgn0086691 - symbol:UK114 "UK114" species:7227 "Droso... 228 5.1e-19 1
TIGR_CMR|CJE_1579 - symbol:CJE_1579 "endoribonuclease L-P... 224 1.4e-18 1
TIGR_CMR|CHY_2460 - symbol:CHY_2460 "endoribonuclease L-P... 212 2.5e-17 1
DICTYBASE|DDB_G0277761 - symbol:DDB_G0277761 "endoribonuc... 204 1.8e-16 1
TIGR_CMR|DET_1052 - symbol:DET_1052 "endoribonuclease L-P... 202 2.9e-16 1
TIGR_CMR|BA_0046 - symbol:BA_0046 "putative endoribonucle... 194 2.0e-15 1
UNIPROTKB|Q8U308 - symbol:yjgF "Enamine/imine deaminase" ... 192 3.3e-15 1
TIGR_CMR|CPS_4974 - symbol:CPS_4974 "putative endoribonuc... 191 4.2e-15 1
TIGR_CMR|GSU_2235 - symbol:GSU_2235 "endoribonuclease L-P... 191 4.2e-15 1
UNIPROTKB|H0YBX3 - symbol:HRSP12 "Ribonuclease UK114" spe... 190 5.4e-15 1
UNIPROTKB|P37552 - symbol:yabJ "Enamine/imine deaminase" ... 186 1.4e-14 1
UNIPROTKB|G4N2M8 - symbol:MGG_07621 "Endoribonuclease L-P... 184 2.3e-14 1
TIGR_CMR|SO_1404 - symbol:SO_1404 "endoribonuclease L-PSP... 178 1.0e-13 1
UNIPROTKB|Q7CP78 - symbol:ridA "Enamine/imine deaminase" ... 177 1.3e-13 1
POMBASE|SPBC2G2.04c - symbol:mmf1 "YjgF family protein Mm... 177 1.3e-13 1
ASPGD|ASPL0000065252 - symbol:AN7040 species:162425 "Emer... 172 4.4e-13 1
UNIPROTKB|P0AGL2 - symbol:tdcF "predicted enamine/imine d... 171 5.6e-13 1
UNIPROTKB|P0AGL3 - symbol:tdcF "Putative reactive interme... 171 5.6e-13 1
UNIPROTKB|P0AGL4 - symbol:tdcF "Putative reactive interme... 171 5.6e-13 1
POMBASE|SPAC1039.10 - symbol:mmf2 "homologous Pmf1 factor... 170 7.1e-13 1
UNIPROTKB|P0AF93 - symbol:ridA "predicted enamine/imine d... 168 1.2e-12 1
UNIPROTKB|P0AF94 - symbol:yjgF "Enamine/imine deaminase" ... 168 1.2e-12 1
UNIPROTKB|P0AF95 - symbol:yjgF "Enamine/imine deaminase" ... 168 1.2e-12 1
UNIPROTKB|Q9KP64 - symbol:VC_2512 "Putative uncharacteriz... 168 1.2e-12 1
TIGR_CMR|VC_2512 - symbol:VC_2512 "conserved hypothetical... 168 1.2e-12 1
TIGR_CMR|CBU_0304 - symbol:CBU_0304 "endoribonuclease L-P... 162 5.0e-12 1
TIGR_CMR|SO_0358 - symbol:SO_0358 "endoribonuclease L-PSP... 162 5.0e-12 1
SGD|S000000859 - symbol:HMF1 "Member of the p14.5 protein... 160 8.2e-12 1
UNIPROTKB|G4MY05 - symbol:MGG_10440 "Endoribonuclease L-P... 156 2.2e-11 1
SGD|S000001313 - symbol:MMF1 "Mitochondrial protein requi... 152 5.8e-11 1
ASPGD|ASPL0000015000 - symbol:AN11062 species:162425 "Eme... 147 2.0e-10 1
TIGR_CMR|CPS_2046 - symbol:CPS_2046 "endoribonuclease, L-... 142 6.6e-10 1
ASPGD|ASPL0000035043 - symbol:AN9080 species:162425 "Emer... 129 1.6e-08 1
ASPGD|ASPL0000028527 - symbol:AN5543 species:162425 "Emer... 127 2.6e-08 1
UNIPROTKB|P0AFQ5 - symbol:rutC "predicted aminoacrylate p... 125 4.2e-08 1
TIGR_CMR|CPS_3858 - symbol:CPS_3858 "endoribonuclease, L-... 112 1.0e-06 1
UNIPROTKB|G4N4Y7 - symbol:MGG_16750 "Uncharacterized prot... 111 1.3e-06 1
UNIPROTKB|Q0BZ17 - symbol:HNE_2586 "Amidohydrolase family... 122 1.5e-06 1
TIGR_CMR|SPO_2000 - symbol:SPO_2000 "endoribonuclease L-P... 107 3.4e-06 1
UNIPROTKB|Q8EJW9 - symbol:SO_0337 "YER057c/Yigf/Uk114 fam... 101 1.5e-05 1
TIGR_CMR|CPS_4240 - symbol:CPS_4240 "endoribonuclease, L-... 101 1.5e-05 1
TIGR_CMR|SO_0337 - symbol:SO_0337 "conserved hypothetical... 101 1.5e-05 1
UNIPROTKB|P0AEB7 - symbol:yoaB "conserved protein" specie... 98 3.0e-05 1
TIGR_CMR|BA_2691 - symbol:BA_2691 "endoribonuclease L-PSP... 95 6.3e-05 1
UNIPROTKB|G4N4I7 - symbol:MGG_05968 "Endoribonuclease L-P... 91 0.00017 1
ASPGD|ASPL0000036888 - symbol:AN9123 species:162425 "Emer... 88 0.00035 1
TIGR_CMR|SPO_2709 - symbol:SPO_2709 "endoribonuclease L-P... 88 0.00035 1
CGD|CAL0002720 - symbol:orf19.839 species:5476 "Candida a... 99 0.00037 1
UNIPROTKB|Q5AHF8 - symbol:CaO19.839 "Putative uncharacter... 99 0.00037 1
TIGR_CMR|SPO_2949 - symbol:SPO_2949 "endoribonuclease L-P... 87 0.00045 1
ZFIN|ZDB-GENE-050227-15 - symbol:atpbd4 "ATP binding doma... 94 0.00079 1
TIGR_CMR|SPO_3680 - symbol:SPO_3680 "endoribonuclease L-P... 84 0.00093 1
>ZFIN|ZDB-GENE-040718-315 [details] [associations]
symbol:hrsp12 "heat-responsive protein 12"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006056 Pfam:PF01042 ZFIN:ZDB-GENE-040718-315
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
OMA:AGNTIYL CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ
EMBL:BX293540 EMBL:CR749175 EMBL:BC079492 IPI:IPI00501400
RefSeq:NP_001012315.1 UniGene:Dr.75381 SMR:Q6AXL2 STRING:Q6AXL2
Ensembl:ENSDART00000052097 GeneID:436849 KEGG:dre:436849
InParanoid:Q6AXL2 NextBio:20831280 Uniprot:Q6AXL2
Length = 135
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 60/107 (56%), Positives = 78/107 (72%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
QAV D T+YISG LG+D +SG++A GV+ Q KQAL N+G ILK AG YE+VVK T+L+
Sbjct: 23 QAVLVDRTMYISGQLGMDPASGQLAAGVQAQTKQALINIGEILKAAGCGYENVVKATVLM 82
Query: 80 NDINDFATVNNVYGQFFKPPYPARSTFQVGKLP---LIDF-CLVVLG 122
DIN+F TVN+VY QFFK +PAR+ +QV LP L++ + VLG
Sbjct: 83 TDINEFNTVNDVYKQFFKSNFPARAAYQVVALPRGGLVEIEAVAVLG 129
>UNIPROTKB|H0YB34 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005634 GO:GO:0005737
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 HGNC:HGNC:16897 EMBL:AP003439
Ensembl:ENST00000520507 Uniprot:H0YB34
Length = 148
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 55/94 (58%), Positives = 69/94 (73%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+YISG +G+D SSG++ G V +AKQAL NMG ILK AG + +VVKTT+L
Sbjct: 34 QAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVL 93
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DINDF TVN +Y Q+FK +PAR+ +QV LP
Sbjct: 94 LADINDFNTVNEIYKQYFKSNFPARAAYQVAALP 127
>UNIPROTKB|P52758 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006449 "regulation
of translational termination" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 EMBL:CH471060
GO:GO:0090305 GO:GO:0004519 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GO:GO:0006449 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 CTD:10247 HOVERGEN:HBG003597
OrthoDB:EOG41JZDQ EMBL:X95384 EMBL:AY026764 EMBL:CR456844
EMBL:CR541652 EMBL:BC010280 EMBL:BC012592 EMBL:BC093059
IPI:IPI00005038 RefSeq:NP_005827.1 UniGene:Hs.18426 PDB:1ONI
PDBsum:1ONI ProteinModelPortal:P52758 SMR:P52758 IntAct:P52758
STRING:P52758 PhosphoSite:P52758 DMDM:1717975 UCD-2DPAGE:P52758
PaxDb:P52758 PeptideAtlas:P52758 PRIDE:P52758 DNASU:10247
Ensembl:ENST00000254878 GeneID:10247 KEGG:hsa:10247 UCSC:uc003yii.1
GeneCards:GC08M099183 HGNC:HGNC:16897 HPA:HPA022856 HPA:HPA023489
MIM:602487 neXtProt:NX_P52758 PharmGKB:PA134890258
InParanoid:P52758 PhylomeDB:P52758 EvolutionaryTrace:P52758
GenomeRNAi:10247 NextBio:38824 ArrayExpress:P52758 Bgee:P52758
CleanEx:HS_HRSP12 Genevestigator:P52758 GermOnline:ENSG00000132541
Uniprot:P52758
Length = 137
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 55/94 (58%), Positives = 69/94 (73%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+YISG +G+D SSG++ G V +AKQAL NMG ILK AG + +VVKTT+L
Sbjct: 23 QAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DINDF TVN +Y Q+FK +PAR+ +QV LP
Sbjct: 83 LADINDFNTVNEIYKQYFKSNFPARAAYQVAALP 116
>UNIPROTKB|F1S0M2 [details] [associations]
symbol:HRSP12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:CU234130 RefSeq:XP_001928988.1
UniGene:Ssc.8236 Ensembl:ENSSSCT00000006670 GeneID:100158002
KEGG:ssc:100158002 Uniprot:F1S0M2
Length = 137
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 54/94 (57%), Positives = 72/94 (76%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+YISG +G+D +SG++ G V +AKQALTNMG ILK AG + +VVKTT+L
Sbjct: 23 QAVLVDRTIYISGQIGMDPASGQLVPGGVVEEAKQALTNMGEILKAAGCDFTNVVKTTVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DINDF+TVN++Y Q+F+ +PAR+ +QV LP
Sbjct: 83 LADINDFSTVNDIYKQYFQGNFPARAAYQVAALP 116
>UNIPROTKB|Q3T114 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005739
GO:GO:0005634 GO:GO:0090305 GO:GO:0004519 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:BC102164 IPI:IPI00686803
RefSeq:NP_001029380.1 UniGene:Bt.1556 ProteinModelPortal:Q3T114
SMR:Q3T114 STRING:Q3T114 PRIDE:Q3T114 Ensembl:ENSBTAT00000016718
GeneID:504390 KEGG:bta:504390 CTD:10247 HOVERGEN:HBG003597
InParanoid:Q3T114 OrthoDB:EOG41JZDQ NextBio:20866637 Uniprot:Q3T114
Length = 137
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 54/94 (57%), Positives = 71/94 (75%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+YISG LG+D +SG++ G V +AKQALTN+G ILK AG + +VVK T+L
Sbjct: 23 QAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKAAGCDFTNVVKATVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DINDF+TVN+VY Q+F+ +PAR+ +QV LP
Sbjct: 83 LADINDFSTVNDVYKQYFQSSFPARAAYQVAALP 116
>MGI|MGI:1095401 [details] [associations]
symbol:Hrsp12 "heat-responsive protein 12" species:10090
"Mus musculus" [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR006056 Pfam:PF01042 MGI:MGI:1095401
GO:GO:0005739 GO:GO:0005634 GO:GO:0090305 GO:GO:0004519
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ EMBL:U50631
EMBL:BC092375 EMBL:BC125590 EMBL:BC125592 IPI:IPI00130640
RefSeq:NP_032313.2 UniGene:Mm.143977 ProteinModelPortal:P52760
SMR:P52760 IntAct:P52760 STRING:P52760 PhosphoSite:P52760
SWISS-2DPAGE:P52760 PaxDb:P52760 PRIDE:P52760
Ensembl:ENSMUST00000022946 GeneID:15473 KEGG:mmu:15473
UCSC:uc007vlt.2 InParanoid:Q569N4 NextBio:288314 Bgee:P52760
CleanEx:MM_HRSP12 Genevestigator:P52760
GermOnline:ENSMUSG00000022323 Uniprot:P52760
Length = 135
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 52/94 (55%), Positives = 68/94 (72%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAVQ D T+YISG +G+D SSG++ G V +AKQAL N+G ILK AG + +VVKTT+L
Sbjct: 23 QAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGEILKAAGCDFNNVVKTTVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D+NDF TVN +Y +F+ PAR+ +QV LP
Sbjct: 83 LADMNDFGTVNEIYKTYFQGSLPARAAYQVAALP 116
>TAIR|locus:2092374 [details] [associations]
symbol:AT3G20390 "AT3G20390" species:3702 "Arabidopsis
thaliana" [GO:0004521 "endoribonuclease activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005739 GO:GO:0005773
GO:GO:0046686 GO:GO:0009570 EMBL:CP002686 GO:GO:0009941
GO:GO:0009579 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
UniGene:At.71273 UniGene:At.8179 EMBL:AF375446 EMBL:AY060547
EMBL:AY086036 EMBL:AK227774 IPI:IPI00529853 RefSeq:NP_188674.1
HSSP:P52758 ProteinModelPortal:Q94JQ4 SMR:Q94JQ4 IntAct:Q94JQ4
STRING:Q94JQ4 PRIDE:Q94JQ4 ProMEX:Q94JQ4 EnsemblPlants:AT3G20390.1
GeneID:821584 KEGG:ath:AT3G20390 TAIR:At3g20390 InParanoid:Q94JQ4
PhylomeDB:Q94JQ4 ProtClustDB:CLSN2684749 Genevestigator:Q94JQ4
Uniprot:Q94JQ4
Length = 187
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 50/95 (52%), Positives = 69/95 (72%)
Query: 20 QAVQHDNTLYISGVLGIDASSGK-MAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ +N +++SGVLG+ +GK ++E VE+Q +Q L NMG ILK +G Y VVKTTI+
Sbjct: 81 QAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIM 140
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
L D+ DF TVN +Y ++F P PARST+QV LPL
Sbjct: 141 LADLADFKTVNEIYAKYFPAPSPARSTYQVAALPL 175
>RGD|70940 [details] [associations]
symbol:Hrsp12 "heat-responsive protein 12" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR006056 Pfam:PF01042 RGD:70940
GO:GO:0005739 GO:GO:0005634 GO:GO:0005777 GO:GO:0090305
GO:GO:0004519 Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ
EMBL:D49363 EMBL:X70825 EMBL:AF015949 EMBL:BC078779 IPI:IPI00231292
PIR:S30349 RefSeq:NP_113902.1 UniGene:Rn.6987 PDB:1QAH PDBsum:1QAH
ProteinModelPortal:P52759 SMR:P52759 STRING:P52759
PhosphoSite:P52759 PRIDE:P52759 GeneID:65151 KEGG:rno:65151
UCSC:RGD:70940 InParanoid:P52759 EvolutionaryTrace:P52759
NextBio:613985 Genevestigator:P52759 GermOnline:ENSRNOG00000005437
Uniprot:P52759
Length = 137
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 51/94 (54%), Positives = 67/94 (71%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+Y+SG +G+D SSG++ G V +AKQAL N+G ILK AG + +VVKTT+L
Sbjct: 23 QAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVL 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DINDF TVN +Y +F+ PAR+ +QV LP
Sbjct: 83 LADINDFGTVNEIYKTYFQGNLPARAAYQVAALP 116
>UNIPROTKB|E1C7E1 [details] [associations]
symbol:HRSP12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:AADN02024998 EMBL:AADN02024997
IPI:IPI00814279 ProteinModelPortal:E1C7E1
Ensembl:ENSGALT00000029404 Uniprot:E1C7E1
Length = 132
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 48/94 (51%), Positives = 65/94 (69%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+YI+G +GI+ S+G++ G ++ + KQA N+G ILK AG Y +VVKTT+
Sbjct: 23 QAVLVDRTMYIAGQIGIEPSNGQLVSGGIKEETKQAFKNLGEILKAAGCDYSNVVKTTVF 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L DI DF +N +YGQFFK P+R +FQV LP
Sbjct: 83 LADIKDFNDMNEIYGQFFKSNCPSRVSFQVAALP 116
>FB|FBgn0086691 [details] [associations]
symbol:UK114 "UK114" species:7227 "Drosophila melanogaster"
[GO:0017148 "negative regulation of translation" evidence=ISS]
[GO:0006457 "protein folding" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0006457 EMBL:AE014134 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 GeneTree:ENSGT00420000029792
OMA:PYNQAVV InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
EMBL:AY119558 RefSeq:NP_609747.1 UniGene:Dm.12046 HSSP:P80601
SMR:Q9V3W0 MINT:MINT-1007857 STRING:Q9V3W0
EnsemblMetazoa:FBtr0080746 EnsemblMetazoa:FBtr0332376 GeneID:34897
KEGG:dme:Dmel_CG15261 UCSC:CG15261-RA CTD:34897 FlyBase:FBgn0086691
InParanoid:Q9V3W0 OrthoDB:EOG4KSN27 GenomeRNAi:34897 NextBio:790777
Uniprot:Q9V3W0
Length = 138
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 49/112 (43%), Positives = 68/112 (60%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV D T+Y+SG LG+D + K+ G QA++AL N+ +LK A + V+K T+
Sbjct: 23 QAVVADRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLEAVLKAADSGVDKVIKNTVF 82
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP---LIDF-CLVVLGGHET 126
L D+NDF VN VY + F +PARS FQV KLP L++ C+ + G ET
Sbjct: 83 LKDLNDFGAVNEVYKRVFNKDFPARSCFQVAKLPMDALVEIECIALTGSVET 134
>TIGR_CMR|CJE_1579 [details] [associations]
symbol:CJE_1579 "endoribonuclease L-PSP, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:CP000025 GenomeReviews:CP000025_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215 OMA:PYNQAVV
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567
RefSeq:YP_179562.1 ProteinModelPortal:Q5HT23 STRING:Q5HT23
GeneID:3232207 KEGG:cjr:CJE1579 PATRIC:20044950
ProtClustDB:CLSK879234 BioCyc:CJEJ195099:GJC0-1609-MONOMER
Uniprot:Q5HT23
Length = 120
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 46/86 (53%), Positives = 59/86 (68%)
Query: 28 LYISGVLGIDASSGKM-AEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFA 86
L+ISG L I+ SG++ + ++ Q KQ+L N+G IL+E G SY+ VVKTT L DINDF
Sbjct: 21 LFISGQLPINPDSGEIESHDIKEQTKQSLKNIGAILEENGISYDKVVKTTCFLADINDFV 80
Query: 87 TVNNVYGQFFKPPYPARSTFQVGKLP 112
N +Y +FFK PYPARS F V LP
Sbjct: 81 AFNEIYAEFFKAPYPARSAFAVKDLP 106
>TIGR_CMR|CHY_2460 [details] [associations]
symbol:CHY_2460 "endoribonuclease L-PSP family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004521 "endoribonuclease activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:VEMDGIM
RefSeq:YP_361254.1 ProteinModelPortal:Q3A9D0 SMR:Q3A9D0
STRING:Q3A9D0 GeneID:3726216 KEGG:chy:CHY_2460 PATRIC:21277985
BioCyc:CHYD246194:GJCN-2459-MONOMER Uniprot:Q3A9D0
Length = 125
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ + L++SG +GI+ +G++ G VE Q KQA+ N+ IL AG + HVVKTTI
Sbjct: 19 QAIKVNGFLFVSGQIGINPQTGELVPGGVEAQIKQAMENIRQILSAAGMEFSHVVKTTIF 78
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
+ +++DF TVN +Y ++F +PARS V LP
Sbjct: 79 ITNMDDFTTVNKIYSEYFGEVFPARSCIAVASLP 112
>DICTYBASE|DDB_G0277761 [details] [associations]
symbol:DDB_G0277761 "endoribonuclease L-PSP"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR006056
dictyBase:DDB_G0277761 Pfam:PF01042 EMBL:AAFI02000022
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
RefSeq:XP_642502.1 ProteinModelPortal:Q86KR5 STRING:Q86KR5
EnsemblProtists:DDB0169400 GeneID:8621213 KEGG:ddi:DDB_G0277761
InParanoid:Q86KR5 OMA:VEMDGIM ProtClustDB:CLSZ2452457
Uniprot:Q86KR5
Length = 129
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 47/95 (49%), Positives = 59/95 (62%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAE--GVENQAKQALTNMGHILKEAGGSYEHVVKTTI 77
QA+ +N +++SG LGID + + V Q K ALTNM +I++ AG S E VVKTTI
Sbjct: 21 QAIIANNQVFVSGCLGIDKDTMQFTSETDVSIQTKLALTNMKNIVEAAGSSMEKVVKTTI 80
Query: 78 LLNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
LL ++DF VN VY FF PARSTF V LP
Sbjct: 81 LLKSMDDFQAVNTVYSTFFPVDPPARSTFAVACLP 115
>TIGR_CMR|DET_1052 [details] [associations]
symbol:DET_1052 "endoribonuclease L-PSP, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:QAIKCNG
RefSeq:YP_181767.1 ProteinModelPortal:Q3Z7N2 STRING:Q3Z7N2
GeneID:3229647 KEGG:det:DET1052 PATRIC:21609149
ProtClustDB:CLSK837122 BioCyc:DETH243164:GJNF-1053-MONOMER
Uniprot:Q3Z7N2
Length = 125
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 44/89 (49%), Positives = 54/89 (60%)
Query: 21 AVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLN 80
AV+ + LYISG +G GK GVE Q K+ L M +LKEAG S++ VVKTT+ L
Sbjct: 18 AVRAGDYLYISGQIGHTDIEGKPLAGVEAQTKRCLEKMAELLKEAGASFDDVVKTTVFLK 77
Query: 81 DINDFATVNNVYGQFFKPPYPARSTFQVG 109
DFA +N+VY FF P PARST G
Sbjct: 78 SQEDFAKMNSVYTTFFSAPKPARSTVIAG 106
>TIGR_CMR|BA_0046 [details] [associations]
symbol:BA_0046 "putative endoribonuclease L-PSP"
species:198094 "Bacillus anthracis str. Ames" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567
OMA:AGNTIYL ProtClustDB:CLSK872604 HSSP:P37552 RefSeq:NP_842615.1
RefSeq:YP_016649.1 RefSeq:YP_026333.1 ProteinModelPortal:Q81VZ3
SMR:Q81VZ3 DNASU:1086283 EnsemblBacteria:EBBACT00000011279
EnsemblBacteria:EBBACT00000017967 EnsemblBacteria:EBBACT00000019901
GeneID:1086283 GeneID:2819036 GeneID:2848704 KEGG:ban:BA_0046
KEGG:bar:GBAA_0046 KEGG:bat:BAS0046
BioCyc:BANT260799:GJAJ-53-MONOMER BioCyc:BANT261594:GJ7F-55-MONOMER
Uniprot:Q81VZ3
Length = 124
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 41/93 (44%), Positives = 56/93 (60%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q + +N Y SG + + AS +A V Q +Q N+ +L+EAG S++ VVKTT+ L
Sbjct: 18 QGIIVNNMFYSSGQIPLTASGELVAGDVTVQTEQVFQNLQAVLEEAGASFDTVVKTTVFL 77
Query: 80 NDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
D++DF VN VYG +F PARS QV KLP
Sbjct: 78 KDMDDFNAVNEVYGSYFSAHKPARSCVQVAKLP 110
>UNIPROTKB|Q8U308 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:186497
"Pyrococcus furiosus DSM 3638" [GO:0019239 "deaminase activity"
evidence=IDA] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737
GO:GO:0009636 GO:GO:0016787 GO:GO:0019239 EMBL:AE009950
GenomeReviews:AE009950_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175
PROSITE:PS01094 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:AGNTIYL
RefSeq:NP_578397.1 HSSP:P39330 ProteinModelPortal:Q8U308 SMR:Q8U308
PRIDE:Q8U308 EnsemblBacteria:EBPYRT00000005430 GeneID:1468513
KEGG:pfu:PF0668 ProtClustDB:CLSK689587 Uniprot:Q8U308
Length = 126
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 39/94 (41%), Positives = 61/94 (64%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ N L+I+G + ID +G++ +G ++ Q +Q L N+ IL+ AG S VVK T+
Sbjct: 19 QAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKAILEAAGYSLTDVVKVTVY 78
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D+NDFA +N VY ++F PAR+ +V +LP
Sbjct: 79 LKDMNDFAKMNEVYAEYFGESKPARAAVEVSRLP 112
>TIGR_CMR|CPS_4974 [details] [associations]
symbol:CPS_4974 "putative endoribonuclease L-PSP"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 KO:K07567 RefSeq:YP_271613.1
ProteinModelPortal:Q47UB0 STRING:Q47UB0 GeneID:3521216
KEGG:cps:CPS_4974 PATRIC:21472741 OMA:ENHIYIS
BioCyc:CPSY167879:GI48-4975-MONOMER Uniprot:Q47UB0
Length = 129
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 38/94 (40%), Positives = 59/94 (62%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV+ +NT+Y+SG + + A + + EG QA+Q N+ + + AGG +VK I
Sbjct: 19 QAVKVNNTVYLSGQIPLVAETMTVIEGGFAEQAEQVFKNLVAVCEAAGGDINDMVKVNIF 78
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D+++F TVN++ ++F PYPAR+ QV KLP
Sbjct: 79 LTDLSNFVTVNDIMSRYFSQPYPARAAIQVSKLP 112
>TIGR_CMR|GSU_2235 [details] [associations]
symbol:GSU_2235 "endoribonuclease L-PSP, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 InterPro:IPR006175
PROSITE:PS01094 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:AGNTIYL
RefSeq:NP_953284.1 ProteinModelPortal:Q74AW4 GeneID:2687529
KEGG:gsu:GSU2235 PATRIC:22027325 ProtClustDB:CLSK924586
BioCyc:GSUL243231:GH27-2207-MONOMER Uniprot:Q74AW4
Length = 126
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV+ L++SG + +D ++G+M +G + Q + + NM +L EAG ++ +VKTTI
Sbjct: 19 QAVRAGGFLFLSGQIPLDPATGEMVDGDITVQTMRVMDNMAAVLAEAGLGFDAIVKTTIF 78
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D+ DFA VN VYG F PARST +V LP
Sbjct: 79 LADLADFAAVNGVYGSRFAAAPPARSTVEVKGLP 112
>UNIPROTKB|H0YBX3 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005634 GO:GO:0005737
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 HGNC:HGNC:16897 EMBL:AP003439
Ensembl:ENST00000521560 Uniprot:H0YBX3
Length = 127
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 53 QALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
QAL NMG ILK AG + +VVKTT+LL DINDF TVN +Y Q+FK +PAR+ +QV LP
Sbjct: 47 QALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALP 106
>UNIPROTKB|P37552 [details] [associations]
symbol:yabJ "Enamine/imine deaminase" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0019239 "deaminase
activity" evidence=IDA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005737 GO:GO:0009636 GO:GO:0016787 GO:GO:0019239
EMBL:AL009126 GenomeReviews:AL009126_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 GO:GO:0009097 EMBL:D26185
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 PIR:S66077 RefSeq:NP_387929.1 PDB:1QD9
PDBsum:1QD9 ProteinModelPortal:P37552 SMR:P37552
EnsemblBacteria:EBBACT00000003065 GeneID:936988 KEGG:bsu:BSU00480
PATRIC:18971567 GenoList:BSU00480 KO:K07567 OMA:AGNTIYL
ProtClustDB:CLSK872604 BioCyc:BSUB:BSU00480-MONOMER
EvolutionaryTrace:P37552 Uniprot:P37552
Length = 125
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 39/94 (41%), Positives = 57/94 (60%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
Q + +N Y SG + + SG+M G ++ Q Q +N+ +L+EAG S+E VVK T+
Sbjct: 19 QGIIVNNMFYSSGQIPL-TPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVF 77
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
+ D+ FA VN VYGQ+F PARS +V +LP
Sbjct: 78 IADMEQFAEVNEVYGQYFDTHKPARSCVEVARLP 111
>UNIPROTKB|G4N2M8 [details] [associations]
symbol:MGG_07621 "Endoribonuclease L-PSP" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0044271 "cellular nitrogen compound biosynthetic process"
evidence=IEP] Pfam:PF01042 EMBL:CM001233 GO:GO:0044271
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 RefSeq:XP_003711544.1
ProteinModelPortal:G4N2M8 EnsemblFungi:MGG_07621T0 GeneID:2683541
KEGG:mgr:MGG_07621 Uniprot:G4N2M8
Length = 147
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 28 LYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFAT 87
+Y SG + +G + EG+ Q + N+ +LKEAG S+E+ +KTT+ L +++D+A
Sbjct: 49 VYTSGTT--PSINGTIPEGISAQTANVINNIAAVLKEAGTSWEYALKTTVFLANMDDYAA 106
Query: 88 VNNVYGQFFKPPYPARSTFQVGKLP---LIDFCLVVLGGH 124
+N VYG+ P PAR+T Q GKLP L++ VV H
Sbjct: 107 MNAVYGELLPNPKPARTTIQAGKLPGNFLVEIEAVVARPH 146
>TIGR_CMR|SO_1404 [details] [associations]
symbol:SO_1404 "endoribonuclease L-PSP, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
GO:GO:0016787 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:SIIHAER
KO:K07567 RefSeq:NP_717024.2 HSSP:P40037 ProteinModelPortal:Q8EH27
GeneID:1169223 KEGG:son:SO_1404 PATRIC:23522460
ProtClustDB:CLSK906245 Uniprot:Q8EH27
Length = 127
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 37/92 (40%), Positives = 56/92 (60%)
Query: 23 QHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILLND 81
++ N ++ SG L + G + +G + Q+ Q L N+ ++L+ GGS + V+KTT L++
Sbjct: 22 RYGNLIFTSGQLPVCKDKGGVVDGGISEQSVQCLENLKYVLEAGGGSLDTVLKTTCYLSE 81
Query: 82 INDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
I+DFA N VY +FK PARS F V LPL
Sbjct: 82 ISDFAAFNEVYKTYFKTDCPARSCFAVKDLPL 113
>UNIPROTKB|Q7CP78 [details] [associations]
symbol:ridA "Enamine/imine deaminase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0009097 "isoleucine biosynthetic process" evidence=IMP]
[GO:0019239 "deaminase activity" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0005737 GO:GO:0009636 EMBL:AE006468
GenomeReviews:AE006468_GR GO:GO:0016787 GO:GO:0019239
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GO:GO:0009097 InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K09022 EMBL:AF095578
RefSeq:NP_463318.1 ProteinModelPortal:Q7CP78 SMR:Q7CP78
PRIDE:Q7CP78 GeneID:1255984 KEGG:stm:STM4458 PATRIC:32387855
OMA:SQAVKIC ProtClustDB:CLSK894630 Uniprot:Q7CP78
Length = 128
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V + + SG + +D +G +AE V QA+Q+L N+ I++ AG +VKTT+ +
Sbjct: 19 QGVDLGSMVITSGQIPVDPKTGAVAEDVSAQARQSLENVKAIVEAAGLKVGDIVKTTVFV 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFATVN Y FF +PARS +V +LP
Sbjct: 79 KDLNDFATVNATYEAFFTEHNATFPARSCVEVARLP 114
>POMBASE|SPBC2G2.04c [details] [associations]
symbol:mmf1 "YjgF family protein Mmf1" species:4896
"Schizosaccharomyces pombe" [GO:0000002 "mitochondrial genome
maintenance" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005759 "mitochondrial matrix"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR006056 PomBase:SPBC2G2.04c Pfam:PF01042 GO:GO:0005829
GO:GO:0005634 GO:GO:0005759 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0000002 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 PIR:T40143 RefSeq:NP_596433.1
ProteinModelPortal:O43003 STRING:O43003 PRIDE:O43003
EnsemblFungi:SPBC2G2.04c.1 GeneID:2540461 KEGG:spo:SPBC2G2.04c
OMA:DQTRQCL OrthoDB:EOG43FM6K NextBio:20801588 Uniprot:O43003
Length = 162
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/95 (41%), Positives = 57/95 (60%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ + +Y SG + + ++GK+ EG V +Q +Q L N+ +L EAG S +VK I
Sbjct: 55 QAIKANGVIYCSGQIPV--ANGKVIEGTVGDQTRQCLLNLQEVLTEAGSSLNKIVKVNIF 112
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
L D++DFA VN VY + P PARS V +PL
Sbjct: 113 LADMDDFAAVNKVYTEVLPDPKPARSCVAVKTVPL 147
>ASPGD|ASPL0000065252 [details] [associations]
symbol:AN7040 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR006056 Pfam:PF01042 EMBL:BN001304
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:AACD01000117 eggNOG:COG0251 InterPro:IPR006175
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
OrthoDB:EOG43FM6K OMA:SIIHAER RefSeq:XP_664644.1
ProteinModelPortal:Q5AXE0 STRING:Q5AXE0
EnsemblFungi:CADANIAT00000432 GeneID:2870121 KEGG:ani:AN7040.2
Uniprot:Q5AXE0
Length = 134
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 37/95 (38%), Positives = 55/95 (57%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA N ++ SG LGID +GKM EG V+++ +Q + N+ +L+ +G S V K +
Sbjct: 20 QATVVGNIVFCSGQLGIDPKTGKMVEGTVKDRTRQIIKNLSAVLEASGSSLADVAKVNVF 79
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
L D+ DF +N VY + F P PAR+ V LP+
Sbjct: 80 LADMKDFQDMNEVYMEGFPEPRPARTCVCVKTLPM 114
>UNIPROTKB|P0AGL2 [details] [associations]
symbol:tdcF "predicted enamine/imine deaminase"
species:83333 "Escherichia coli K-12" [GO:0042802 "identical
protein binding" evidence=IDA] [GO:0070689 "L-threonine catabolic
process to propionate" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006566 "threonine metabolic process"
evidence=IDA] InterPro:IPR006056 UniPathway:UPA00052 Pfam:PF01042
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0016787
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 GO:GO:0006566 GO:GO:0070689
KO:K07567 ProtClustDB:PRK11401 PIR:F65100 RefSeq:NP_417583.4
RefSeq:YP_491302.1 PDB:2UYJ PDB:2UYK PDB:2UYN PDB:2UYP PDBsum:2UYJ
PDBsum:2UYK PDBsum:2UYN PDBsum:2UYP ProteinModelPortal:P0AGL2
SMR:P0AGL2 DIP:DIP-48213N EnsemblBacteria:EBESCT00000001141
EnsemblBacteria:EBESCT00000014312 GeneID:12930270 GeneID:947624
KEGG:ecj:Y75_p3036 KEGG:eco:b3113 PATRIC:32121642 EchoBASE:EB2611
EcoGene:EG12757 BioCyc:EcoCyc:G7626-MONOMER
BioCyc:ECOL316407:JW5521-MONOMER EvolutionaryTrace:P0AGL2
Genevestigator:P0AGL2 Uniprot:P0AGL2
Length = 129
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 36/96 (37%), Positives = 58/96 (60%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V + ++ SG + + +G++ V++QA+ +L N+ I+ AG S ++K T+ +
Sbjct: 19 QGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFI 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFAT+N VY QFF + YP RS QV +LP
Sbjct: 79 TDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLP 114
>UNIPROTKB|P0AGL3 [details] [associations]
symbol:tdcF "Putative reactive intermediate deaminase TdcF"
species:199310 "Escherichia coli CFT073" [GO:0006566 "threonine
metabolic process" evidence=ISS] InterPro:IPR006056
UniPathway:UPA00052 Pfam:PF01042 GO:GO:0016787 EMBL:AE014075
GenomeReviews:AE014075_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 GO:GO:0006566 GO:GO:0070689
KO:K07567 RefSeq:NP_755738.1 ProteinModelPortal:P0AGL3 SMR:P0AGL3
EnsemblBacteria:EBESCT00000041583 GeneID:1040096 KEGG:ecc:c3871
PATRIC:18285526 ProtClustDB:PRK11401 Uniprot:P0AGL3
Length = 129
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 36/96 (37%), Positives = 58/96 (60%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V + ++ SG + + +G++ V++QA+ +L N+ I+ AG S ++K T+ +
Sbjct: 19 QGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFI 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFAT+N VY QFF + YP RS QV +LP
Sbjct: 79 TDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLP 114
>UNIPROTKB|P0AGL4 [details] [associations]
symbol:tdcF "Putative reactive intermediate deaminase TdcF"
species:623 "Shigella flexneri" [GO:0006566 "threonine metabolic
process" evidence=ISS] InterPro:IPR006056 UniPathway:UPA00052
Pfam:PF01042 EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0016787 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
GO:GO:0006566 GO:GO:0070689 KO:K07567 ProtClustDB:PRK11401
RefSeq:NP_708917.2 RefSeq:NP_838627.1 ProteinModelPortal:P0AGL4
SMR:P0AGL4 EnsemblBacteria:EBESCT00000085096
EnsemblBacteria:EBESCT00000092667 GeneID:1027187 GeneID:1079601
KEGG:sfl:SF3153 KEGG:sfx:S3365 PATRIC:18708466 Uniprot:P0AGL4
Length = 129
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 36/96 (37%), Positives = 58/96 (60%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V + ++ SG + + +G++ V++QA+ +L N+ I+ AG S ++K T+ +
Sbjct: 19 QGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFI 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFAT+N VY QFF + YP RS QV +LP
Sbjct: 79 TDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLP 114
>POMBASE|SPAC1039.10 [details] [associations]
symbol:mmf2 "homologous Pmf1 factor 1, implicated in
isoleucine biosynthesis (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0009097 "isoleucine biosynthetic process" evidence=ISO]
InterPro:IPR006056 Pfam:PF01042 PomBase:SPAC1039.10 GO:GO:0005739
GO:GO:0005634 GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
PIR:T50060 RefSeq:NP_595001.1 ProteinModelPortal:Q9UR06
STRING:Q9UR06 EnsemblFungi:SPAC1039.10.1 GeneID:2543017
KEGG:spo:SPAC1039.10 OMA:SIIHAER OrthoDB:EOG4FJCKC NextBio:20804048
Uniprot:Q9UR06
Length = 126
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 35/95 (36%), Positives = 52/95 (54%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV+ ++ SG + G G ++ Q + + N+ +L+ AG S E +VK I
Sbjct: 19 QAVKSGGLIFCSGQAAV--KDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLEKLVKVNIF 76
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
L DI+DFA +N VY + P PAR+T GK+PL
Sbjct: 77 LTDIDDFAAMNEVYKEMLPDPMPARTTVAAGKIPL 111
>UNIPROTKB|P0AF93 [details] [associations]
symbol:ridA "predicted enamine/imine deaminase"
species:83333 "Escherichia coli K-12" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0009097 "isoleucine biosynthetic process"
evidence=IEA] [GO:0009082 "branched-chain amino acid biosynthetic
process" evidence=IEA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019239 "deaminase activity" evidence=ISO;ISS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0005737 GO:GO:0016020 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0009636
GO:GO:0016787 GO:GO:0019239 EMBL:U14003 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 GO:GO:0009097 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
KO:K09022 RefSeq:NP_418664.2 RefSeq:YP_492383.1 PDB:1QU9
PDBsum:1QU9 ProteinModelPortal:P0AF93 SMR:P0AF93 DIP:DIP-36232N
SWISS-2DPAGE:P0AF93 PaxDb:P0AF93 PRIDE:P0AF93
EnsemblBacteria:EBESCT00000002907 EnsemblBacteria:EBESCT00000016129
GeneID:12933726 GeneID:948771 KEGG:ecj:Y75_p4128 KEGG:eco:b4243
PATRIC:32124063 EchoBASE:EB2415 EcoGene:EG12524
ProtClustDB:CLSK950280 BioCyc:EcoCyc:G7877-MONOMER
BioCyc:ECOL316407:JW5755-MONOMER EvolutionaryTrace:P0AF93
Genevestigator:P0AF93 Uniprot:P0AF93
Length = 128
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V N + SG + ++ +G++ V QA+Q+L N+ I++ AG +VKTT+ +
Sbjct: 19 QGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFV 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFATVN Y FF +PARS +V +LP
Sbjct: 79 KDLNDFATVNATYEAFFTEHNATFPARSCVEVARLP 114
>UNIPROTKB|P0AF94 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:199310
"Escherichia coli CFT073" [GO:0019239 "deaminase activity"
evidence=ISS] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737
GO:GO:0009636 GO:GO:0016787 GO:GO:0019239 EMBL:AE014075
GenomeReviews:AE014075_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 GO:GO:0009097 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL RefSeq:NP_757189.1
ProteinModelPortal:P0AF94 SMR:P0AF94
EnsemblBacteria:EBESCT00000042525 GeneID:1037367 KEGG:ecc:c5342
PATRIC:18288330 KO:K09022 ProtClustDB:CLSK556760 Uniprot:P0AF94
Length = 128
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V N + SG + ++ +G++ V QA+Q+L N+ I++ AG +VKTT+ +
Sbjct: 19 QGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFV 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFATVN Y FF +PARS +V +LP
Sbjct: 79 KDLNDFATVNATYEAFFTEHNATFPARSCVEVARLP 114
>UNIPROTKB|P0AF95 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:623 "Shigella
flexneri" [GO:0019239 "deaminase activity" evidence=ISS]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737 GO:GO:0009636
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0016787 GO:GO:0019239
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 KO:K09022 ProtClustDB:CLSK556760
RefSeq:NP_709958.2 RefSeq:NP_839641.1 ProteinModelPortal:P0AF95
SMR:P0AF95 EnsemblBacteria:EBESCT00000085520
EnsemblBacteria:EBESCT00000090787 GeneID:1026589 GeneID:1080714
KEGG:sfl:SF4247 KEGG:sfx:S4509 PATRIC:18711038 Uniprot:P0AF95
Length = 128
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V N + SG + ++ +G++ V QA+Q+L N+ I++ AG +VKTT+ +
Sbjct: 19 QGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFV 78
Query: 80 NDINDFATVNNVYGQFF---KPPYPARSTFQVGKLP 112
D+NDFATVN Y FF +PARS +V +LP
Sbjct: 79 KDLNDFATVNATYEAFFTEHNATFPARSCVEVARLP 114
>UNIPROTKB|Q9KP64 [details] [associations]
symbol:VC_2512 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006056 Pfam:PF01042 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K09022
HSSP:P39330 PIR:B82067 RefSeq:NP_232141.1 ProteinModelPortal:Q9KP64
SMR:Q9KP64 DNASU:2615176 GeneID:2615176 KEGG:vch:VC2512
PATRIC:20084053 OMA:DEHNVAH ProtClustDB:CLSK874822 Uniprot:Q9KP64
Length = 129
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/97 (36%), Positives = 58/97 (59%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V N + SG + ++ ++G++ + QA+Q+L N+ +++ +G + +VK T+ +
Sbjct: 19 QGVDLGNMVLTSGQIPVNPATGEIPADIAAQARQSLDNVKAVVEASGLTVGDIVKMTVFV 78
Query: 80 NDINDFATVNNVYGQFFKPP----YPARSTFQVGKLP 112
D+NDF TVN VYG FF YPARS +V +LP
Sbjct: 79 KDLNDFGTVNQVYGAFFDEHKVAHYPARSCVEVARLP 115
>TIGR_CMR|VC_2512 [details] [associations]
symbol:VC_2512 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR006056
Pfam:PF01042 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K09022 HSSP:P39330
PIR:B82067 RefSeq:NP_232141.1 ProteinModelPortal:Q9KP64 SMR:Q9KP64
DNASU:2615176 GeneID:2615176 KEGG:vch:VC2512 PATRIC:20084053
OMA:DEHNVAH ProtClustDB:CLSK874822 Uniprot:Q9KP64
Length = 129
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/97 (36%), Positives = 58/97 (59%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V N + SG + ++ ++G++ + QA+Q+L N+ +++ +G + +VK T+ +
Sbjct: 19 QGVDLGNMVLTSGQIPVNPATGEIPADIAAQARQSLDNVKAVVEASGLTVGDIVKMTVFV 78
Query: 80 NDINDFATVNNVYGQFFKPP----YPARSTFQVGKLP 112
D+NDF TVN VYG FF YPARS +V +LP
Sbjct: 79 KDLNDFGTVNQVYGAFFDEHKVAHYPARSCVEVARLP 115
>TIGR_CMR|CBU_0304 [details] [associations]
symbol:CBU_0304 "endoribonuclease L-PSP, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004521
"endoribonuclease activity" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
RefSeq:NP_819347.2 ProteinModelPortal:Q83EL5 PRIDE:Q83EL5
GeneID:1208186 KEGG:cbu:CBU_0304 PATRIC:17929303 OMA:MDGVMEI
ProtClustDB:CLSK913971 BioCyc:CBUR227377:GJ7S-311-MONOMER
Uniprot:Q83EL5
Length = 148
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 38/108 (35%), Positives = 62/108 (57%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV+ NT+Y SG + ++ + ++ G ++ + N+ I + AGGS +VK TI
Sbjct: 40 QAVKAGNTVYFSGQIPLEPETMEIISGDFKDHVHRVFKNIAAIAEAAGGSLAQIVKLTIY 99
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP---LIDF-CLVVLG 122
L D+ +F VN V +++ PYPAR+ V +LP LI+ ++VLG
Sbjct: 100 LTDMENFHLVNEVMKHYYEEPYPARAVIAVKQLPKNALIEIDAVMVLG 147
>TIGR_CMR|SO_0358 [details] [associations]
symbol:SO_0358 "endoribonuclease L-PSP, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
GO:GO:0016787 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567
OMA:VEMDGIM HSSP:P44839 RefSeq:NP_715998.1
ProteinModelPortal:Q8EJU9 GeneID:1168235 KEGG:son:SO_0358
PATRIC:23520421 ProtClustDB:CLSK905712 Uniprot:Q8EJU9
Length = 127
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKM-AEGVENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV+ NT+Y+SG + + S+ ++ ++ E Q Q N+ + AGG+ +VK I
Sbjct: 21 QAVKVGNTVYLSGQIPLVPSTMQIVSDDFEAQVVQVFENLTAVCTAAGGTINDIVKLNIF 80
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L D++ FA VN + ++F PYPAR+ V +LP
Sbjct: 81 LTDLSHFAKVNEIMSRYFSQPYPARAAIGVKQLP 114
>SGD|S000000859 [details] [associations]
symbol:HMF1 "Member of the p14.5 protein family with
similarity to Mmf1p" species:4932 "Saccharomyces cerevisiae"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005758
"mitochondrial intermembrane space" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] InterPro:IPR006056 SGD:S000000859
Pfam:PF01042 GO:GO:0005829 GO:GO:0005634 GO:GO:0005758
EMBL:BK006939 EMBL:U18813 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
RefSeq:NP_010981.3 GeneID:856788 KEGG:sce:YER060W
RefSeq:NP_010978.3 GeneID:856785 KEGG:sce:YER057C EMBL:AB050475
EMBL:AY558456 PIR:S50560 PDB:1JD1 PDBsum:1JD1
ProteinModelPortal:P40037 SMR:P40037 DIP:DIP-4314N IntAct:P40037
MINT:MINT-555220 STRING:P40037 PaxDb:P40037 PeptideAtlas:P40037
EnsemblFungi:YER057C CYGD:YER057c GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 OMA:PYNQAVV OrthoDB:EOG483HF3
EvolutionaryTrace:P40037 NextBio:983003 Genevestigator:P40037
GermOnline:YER057C InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 Uniprot:P40037
Length = 129
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 21 AVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
A++ +N +++SG + + + K+ EG + ++A+Q + N+ ++L+ + S + VVK I L
Sbjct: 23 AMKVNNLIFLSGQIPVTPDN-KLVEGSIADKAEQVIQNIKNVLEASNSSLDRVVKVNIFL 81
Query: 80 NDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
DIN FA N+VY ++F PARS V LPL
Sbjct: 82 ADINHFAEFNSVYAKYFNTHKPARSCVAVAALPL 115
>UNIPROTKB|G4MY05 [details] [associations]
symbol:MGG_10440 "Endoribonuclease L-PSP" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0044271 "cellular nitrogen compound biosynthetic process"
evidence=IEP] InterPro:IPR006056 Pfam:PF01042 GO:GO:0044271
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:CM001232 InterPro:IPR006175 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 RefSeq:XP_003713340.1 ProteinModelPortal:G4MY05
EnsemblFungi:MGG_10440T0 GeneID:2682073 KEGG:mgr:MGG_10440
Uniprot:G4MY05
Length = 128
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 32/95 (33%), Positives = 58/95 (61%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ + +++SG + +D S ++ +G ++ Q + N+ IL+EAG S E VVK +
Sbjct: 22 QAIKANGFVFVSGAVPMDPVSMQIIDGDIQAHTHQCIKNLTAILEEAGSSIEKVVKVNVF 81
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
L++++DFA +N +Y Q++ P R+ V LPL
Sbjct: 82 LSNMDDFAAMNEIYMQYWGEVKPCRTCVAVKTLPL 116
>SGD|S000001313 [details] [associations]
symbol:MMF1 "Mitochondrial protein required for
transamination of isoleucine" species:4932 "Saccharomyces
cerevisiae" [GO:0032543 "mitochondrial translation" evidence=IGI]
[GO:0009097 "isoleucine biosynthetic process" evidence=IMP]
[GO:0005759 "mitochondrial matrix" evidence=IEA;IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] InterPro:IPR006056 SGD:S000001313 Pfam:PF01042
GO:GO:0005759 EMBL:BK006942 GO:GO:0032543 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 EMBL:Z38060 GO:GO:0009097
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:DQTRQCL
OrthoDB:EOG43FM6K EMBL:AB050474 EMBL:AY558301 PIR:S48428
RefSeq:NP_012213.3 RefSeq:NP_012219.3 PDB:3QUW PDBsum:3QUW
ProteinModelPortal:P40185 SMR:P40185 DIP:DIP-4714N IntAct:P40185
MINT:MINT-487056 STRING:P40185 SWISS-2DPAGE:P40185 PaxDb:P40185
PeptideAtlas:P40185 EnsemblFungi:YIL051C GeneID:854760
GeneID:854766 KEGG:sce:YIL045W KEGG:sce:YIL051C CYGD:YIL051c
NextBio:977502 Genevestigator:P40185 GermOnline:YIL051C
Uniprot:P40185
Length = 145
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 33/103 (32%), Positives = 58/103 (56%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
QA++ +N +Y+SG + + + + +A+Q N+ +IL E+ S +++VK + L
Sbjct: 38 QAMKANNFVYVSGQIPYTPDNKPVQGSISEKAEQVFQNVKNILAESNSSLDNIVKVNVFL 97
Query: 80 NDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL-IDFCLVVL 121
D+ +FA N+VY + F PARS V LPL +D + V+
Sbjct: 98 ADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVI 140
>ASPGD|ASPL0000015000 [details] [associations]
symbol:AN11062 species:162425 "Emericella nidulans"
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR006056
Pfam:PF01042 EMBL:BN001302 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 ProteinModelPortal:C8V7G7
EnsemblFungi:CADANIAT00004297 OMA:QAIKCNG Uniprot:C8V7G7
Length = 128
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QA++ + +Y SG + +DA +GK+ +G V+ Q + N+ IL+EAG VVK +
Sbjct: 22 QAIKCNGMVYCSGAVAMDAETGKIIDGDVKAHTAQCIKNLSAILEEAGSDITKVVKVNVF 81
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
L +++DF +N Y + + P R+ V LPL
Sbjct: 82 LANMDDFTAMNEEYMKHWGDVKPVRTCVAVKTLPL 116
>TIGR_CMR|CPS_2046 [details] [associations]
symbol:CPS_2046 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] Pfam:PF01042
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:YP_268774.1 ProteinModelPortal:Q483J2 STRING:Q483J2
GeneID:3518721 KEGG:cps:CPS_2046 PATRIC:21467215 OMA:EWLVEID
ProtClustDB:CLSK869315 BioCyc:CPSY167879:GI48-2116-MONOMER
Uniprot:Q483J2
Length = 136
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVEN-QAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV+ NT+Y+ G +G D + + G QAKQA+ N+ +L+EAG HVVKTT
Sbjct: 27 QAVKAGNTIYVRGQIGTDFNGNLVGLGDPGEQAKQAMKNVKQLLEEAGSELSHVVKTTTY 86
Query: 79 LNDINDFATVNNVYGQFFKPPYP 101
+ D V G++FK YP
Sbjct: 87 ITDPRYREPVYQEVGKWFKGVYP 109
>ASPGD|ASPL0000035043 [details] [associations]
symbol:AN9080 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006056 Pfam:PF01042
EMBL:BN001306 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:SQAVKIC ProteinModelPortal:C8VH67
EnsemblFungi:CADANIAT00009535 Uniprot:C8VH67
Length = 161
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
QAV+ + +++SG + D +G + EG + + + N+ IL AG S + +++ +
Sbjct: 57 QAVKANGQIFLSGQIPAD-KNGNLVEGDIRTKTQACCDNIKAILDAAGSSVDKIIRVNVF 115
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVGKLP 112
L+D+++FA +N Y +FF PARS +LP
Sbjct: 116 LDDMSNFAEMNAQYEKFFTHK-PARSCIAAKQLP 148
>ASPGD|ASPL0000028527 [details] [associations]
symbol:AN5543 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01042 EMBL:BN001305 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 EMBL:AACD01000095 HOGENOM:HOG000267215
PANTHER:PTHR11803 OrthoDB:EOG4FJCKC RefSeq:XP_663147.1
ProteinModelPortal:Q5B1N7 EnsemblFungi:CADANIAT00003539
GeneID:2871833 KEGG:ani:AN5543.2 OMA:EIECIAQ Uniprot:Q5B1N7
Length = 116
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 33 VLGIDASSGKMAEGVENQA-KQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVNNV 91
V G+ +G+ A G QA + L N+ +L+ +G S E VVK + L D+ DFA +N V
Sbjct: 23 VPGLVFLAGQTATGEIKQATRTVLQNIKEVLELSGSSLEQVVKYNVYLADMKDFAAMNEV 82
Query: 92 YGQFFKPPYPARSTFQ 107
Y +F P P+RS Q
Sbjct: 83 YIEFLPKPMPSRSCLQ 98
>UNIPROTKB|P0AFQ5 [details] [associations]
symbol:rutC "predicted aminoacrylate peracid reductase"
species:83333 "Escherichia coli K-12" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006212 "uracil
catabolic process" evidence=IMP] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=IMP] [GO:0019740 "nitrogen utilization"
evidence=IMP] HAMAP:MF_00831 Pfam:PF01042 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016491
GO:GO:0019740 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GO:GO:0006212 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 PIR:H64842 RefSeq:NP_415530.1 RefSeq:YP_489283.1
ProteinModelPortal:P0AFQ5 SMR:P0AFQ5 IntAct:P0AFQ5
EnsemblBacteria:EBESCT00000002580 EnsemblBacteria:EBESCT00000015649
GeneID:12931042 GeneID:945599 KEGG:ecj:Y75_p0983 KEGG:eco:b1010
PATRIC:32117249 EchoBASE:EB3617 EcoGene:EG13857 KO:K09021
OMA:TIITPPG ProtClustDB:CLSK879923 BioCyc:EcoCyc:G6521-MONOMER
BioCyc:ECOL316407:JW0995-MONOMER Genevestigator:P0AFQ5
InterPro:IPR019898 TIGRFAMs:TIGR03610 Uniprot:P0AFQ5
Length = 128
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 25 DNTLYISGVLGIDASSGKM-AEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIN 83
D +Y+SG L D + + A+ + Q + L + +++ AGG+ V +I + D
Sbjct: 25 DGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWK 84
Query: 84 DFATVNNVYGQFFKPPYPARSTFQVG 109
++A +N +Y +FF PAR Q G
Sbjct: 85 NYAAINEIYAEFFPGDKPARFCIQCG 110
>TIGR_CMR|CPS_3858 [details] [associations]
symbol:CPS_3858 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] Pfam:PF01042
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:YP_270520.1 ProteinModelPortal:Q47XF0 STRING:Q47XF0
GeneID:3522803 KEGG:cps:CPS_3858 PATRIC:21470621 OMA:PYPNRAA
ProtClustDB:CLSK909028 BioCyc:CPSY167879:GI48-3875-MONOMER
Uniprot:Q47XF0
Length = 125
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 21 AVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
A+ +NTL + + I+A G++ EG +E QA+Q + N H ++ A + + V + I +
Sbjct: 19 AIIANNTLSTAQI-PINAE-GQVVEGGIEAQARQTMENFKHTIEAANLTMDDVTQVLIYV 76
Query: 80 NDINDFATVNNVYGQFFKPPYPARSTFQVGKLPLIDF-CLVV 120
+ N VY ++F+ PYP R+ V L + C VV
Sbjct: 77 TARDQLPVFNKVYAEYFQAPYPNRAAMIVAGLAREEMLCEVV 118
>UNIPROTKB|G4N4Y7 [details] [associations]
symbol:MGG_16750 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01042 EMBL:CM001233 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
RefSeq:XP_003711906.1 ProteinModelPortal:G4N4Y7
EnsemblFungi:MGG_16750T0 GeneID:12984246 KEGG:mgr:MGG_16750
Uniprot:G4N4Y7
Length = 137
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEG-VENQAKQALTNMGHILKEAGGSYEHVVKTTIL 78
+AV + +++SG G D S+G++A G V QA+Q N+ L EAG VV+ +
Sbjct: 21 RAVVSGDWVFVSGCTGYDYSTGEIAAGDVAAQAEQTFRNIASALGEAGAGMRDVVRVRYI 80
Query: 79 LNDINDFATVNNVYGQFFKPPYPARSTFQVG 109
L + DF + +V ++ PA + Q G
Sbjct: 81 LPNRTDFPKIWDVTKRWLGDVRPAATMVQAG 111
>UNIPROTKB|Q0BZ17 [details] [associations]
symbol:HNE_2586 "Amidohydrolase family/endoribonuclease
L-PSP" species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011059 Pfam:PF01042 SUPFAM:SSF51338
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:CP000158 GenomeReviews:CP000158_GR GO:GO:0016810
eggNOG:COG0251 InterPro:IPR006175 PANTHER:PTHR11803
RefSeq:YP_761276.1 ProteinModelPortal:Q0BZ17 STRING:Q0BZ17
GeneID:4288554 KEGG:hne:HNE_2586 PATRIC:32218029
HOGENOM:HOG000288353 OMA:VEVECMA ProtClustDB:CLSK839674
BioCyc:HNEP228405:GI69-2604-MONOMER Uniprot:Q0BZ17
Length = 755
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 21 AVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLN 80
AV+ N +Y+SG +G A G+ ++ + A + + ++ + AG + + K T++L
Sbjct: 649 AVRVGNIIYLSGQIG-GAEGGRSSD-FRDHAVEVMDSVRQVAASAGADMDQIFKCTVMLE 706
Query: 81 DINDFATVNNVY-GQFFKPPYPARSTFQVGKLPL 113
D++++ N VY G F K PARS F L L
Sbjct: 707 DMSNWPAFNEVYAGYFTKGRMPARSAFGADGLAL 740
>TIGR_CMR|SPO_2000 [details] [associations]
symbol:SPO_2000 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
HOGENOM:HOG000267214 RefSeq:YP_167234.1 ProteinModelPortal:Q5LRX1
GeneID:3193577 KEGG:sil:SPO2000 PATRIC:23377331 OMA:KILMANI
ProtClustDB:CLSK751568 Uniprot:Q5LRX1
Length = 117
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
Q V H +T+Y++G +G +S V Q + L + +L EAG +++TTI L
Sbjct: 15 QIVIHGDTVYLAGQVGTAGAS------VAQQTQDCLNQIDALLSEAGSDRTRILQTTIWL 68
Query: 80 NDINDFATVNNVYGQFFKPPY-PARS 104
D+ DFA +N V+ + + PAR+
Sbjct: 69 ADMADFAEMNAVWDSWVPAGHAPARA 94
>UNIPROTKB|Q8EJW9 [details] [associations]
symbol:SO_0337 "YER057c/Yigf/Uk114 family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01042 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 HOGENOM:HOG000267214
OMA:CGQVCKD HSSP:P37552 RefSeq:NP_715977.1
ProteinModelPortal:Q8EJW9 GeneID:1168214 KEGG:son:SO_0337
PATRIC:23520377 ProtClustDB:CLSK905703 Uniprot:Q8EJW9
Length = 118
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 22 VQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLND 81
V H T+Y+ G + D + + Q L + +L +AG S EH++ T+ L D
Sbjct: 16 VIHQGTVYLCGQVAKDKY-----QNITEQTTTMLEEVDALLAQAGSSREHLLSATLYLKD 70
Query: 82 INDFATVNNVYGQFF-KPPYPARSTFQ 107
+ND+ +N V+ + K PAR+ Q
Sbjct: 71 MNDYDAMNAVWDAWVPKGHAPARACVQ 97
>TIGR_CMR|CPS_4240 [details] [associations]
symbol:CPS_4240 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] Pfam:PF01042
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 HOGENOM:HOG000267214 RefSeq:YP_270890.1
ProteinModelPortal:Q47WD2 STRING:Q47WD2 GeneID:3522251
KEGG:cps:CPS_4240 PATRIC:21471345 OMA:CGQVCKD
BioCyc:CPSY167879:GI48-4250-MONOMER Uniprot:Q47WD2
Length = 115
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 22 VQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLND 81
V+H T+Y+ G + DA+ + + Q + L + +L +AG +H++ TI + D
Sbjct: 15 VKHHGTIYLCGQVAADAT-----KDITEQTQTMLDKVDALLIQAGSDRKHILSATIYVKD 69
Query: 82 INDFATVNNVYGQFFKPPY-PARS 104
++ FA +N V+ + Y PAR+
Sbjct: 70 MSYFADMNAVWDAWVPEGYAPARA 93
>TIGR_CMR|SO_0337 [details] [associations]
symbol:SO_0337 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF01042 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 HOGENOM:HOG000267214
OMA:CGQVCKD HSSP:P37552 RefSeq:NP_715977.1
ProteinModelPortal:Q8EJW9 GeneID:1168214 KEGG:son:SO_0337
PATRIC:23520377 ProtClustDB:CLSK905703 Uniprot:Q8EJW9
Length = 118
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 22 VQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLND 81
V H T+Y+ G + D + + Q L + +L +AG S EH++ T+ L D
Sbjct: 16 VIHQGTVYLCGQVAKDKY-----QNITEQTTTMLEEVDALLAQAGSSREHLLSATLYLKD 70
Query: 82 INDFATVNNVYGQFF-KPPYPARSTFQ 107
+ND+ +N V+ + K PAR+ Q
Sbjct: 71 MNDYDAMNAVWDAWVPKGHAPARACVQ 97
>UNIPROTKB|P0AEB7 [details] [associations]
symbol:yoaB "conserved protein" species:83333 "Escherichia
coli K-12" [GO:0042710 "biofilm formation" evidence=IMP]
Pfam:PF01042 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 PIR:A64942 RefSeq:NP_416323.4
RefSeq:YP_490070.1 ProteinModelPortal:P0AEB7 SMR:P0AEB7
DIP:DIP-47897N EnsemblBacteria:EBESCT00000002696
EnsemblBacteria:EBESCT00000018006 GeneID:12931348 GeneID:946357
KEGG:ecj:Y75_p1784 KEGG:eco:b1809 PATRIC:32118935 EchoBASE:EB3287
EcoGene:EG13514 HOGENOM:HOG000267214 OMA:DVTIFLA
ProtClustDB:CLSK880215 BioCyc:EcoCyc:G6993-MONOMER
BioCyc:ECOL316407:JW5295-MONOMER Genevestigator:P0AEB7
Uniprot:P0AEB7
Length = 114
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 28/90 (31%), Positives = 44/90 (48%)
Query: 22 VQHDNTLYISGVL-GIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLN 80
V H+NTLY +GV +DA + + Q L + +L++ G + ++ TI L
Sbjct: 16 VIHNNTLYYTGVPENLDADAFE-------QTANTLAQIDAVLEKQGSNKSSILDATIFLA 68
Query: 81 DINDFATVNNVYGQFFKPPY-PARSTFQVG 109
D NDFA +N + + + P R T Q G
Sbjct: 69 DKNDFAAMNKAWDAWVVAGHAPVRCTVQAG 98
>TIGR_CMR|BA_2691 [details] [associations]
symbol:BA_2691 "endoribonuclease L-PSP, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:NP_845048.1 RefSeq:YP_019332.1 RefSeq:YP_028766.1
HSSP:P37552 ProteinModelPortal:Q81PV3 DNASU:1087345
EnsemblBacteria:EBBACT00000009055 EnsemblBacteria:EBBACT00000016755
EnsemblBacteria:EBBACT00000019538 GeneID:1087345 GeneID:2816679
GeneID:2850597 KEGG:ban:BA_2691 KEGG:bar:GBAA_2691 KEGG:bat:BAS2506
OMA:INIDGQI ProtClustDB:CLSK903098
BioCyc:BANT260799:GJAJ-2571-MONOMER
BioCyc:BANT261594:GJ7F-2665-MONOMER Uniprot:Q81PV3
Length = 131
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVEN---QAKQALTNMGHILKEAGGSYEHVVKTT 76
+A T+YISG + I+ + G++ G+ + Q +Q N+ L+ + ++ VVK T
Sbjct: 22 EASNAKRTIYISGQVAIN-TDGQIV-GINDLATQTRQVFENIKIALETSDLNFNDVVKLT 79
Query: 77 ILLNDINDFATVNNVYGQFFKPPYP-ARSTFQVGKL 111
L DI+ A V ++ Q+ P A S +V KL
Sbjct: 80 FFLTDISQMAIVRDIRDQYIDTNNPPASSAVEVRKL 115
>UNIPROTKB|G4N4I7 [details] [associations]
symbol:MGG_05968 "Endoribonuclease L-PSP" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF01042
EMBL:CM001233 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
RefSeq:XP_003711809.1 ProteinModelPortal:G4N4I7
EnsemblFungi:MGG_05968T0 GeneID:2684007 KEGG:mgr:MGG_05968
Uniprot:G4N4I7
Length = 136
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 26/76 (34%), Positives = 37/76 (48%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGS-YEHVVKTTIL 78
Q+V+ N + SG G D +GK++E E + QA N+ LK+AGG E V K +
Sbjct: 24 QSVRLGNEIKTSGQGGWDTQTGKISEKYEEELDQAFDNLDVALKDAGGKGLEQVYKVNMY 83
Query: 79 LNDINDFATVNNVYGQ 94
L V+GQ
Sbjct: 84 LT----IEMTEEVFGQ 95
>ASPGD|ASPL0000036888 [details] [associations]
symbol:AN9123 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01042 EMBL:BN001306 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 InterPro:IPR006175
PANTHER:PTHR11803 ProteinModelPortal:C8VK78
EnsemblFungi:CADANIAT00009487 OMA:TIPRDIN Uniprot:C8VK78
Length = 143
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGG---SYEHVVKTT 76
QAV+ NT+++SG G D + ++ V Q QA N+ IL AGG S + V++
Sbjct: 25 QAVRVGNTIHLSGQGGWDTQTQAISSSVPRQTDQAFANIDAILHAAGGKGWSQVYKVRSY 84
Query: 77 ILLNDINDFATVNNVYGQFFKPPYPARSTFQVGKL 111
L D ++ + ++ P + QVG+L
Sbjct: 85 HLALDAEAQDSMARNFDKWIPEHKPLWTCVQVGRL 119
>TIGR_CMR|SPO_2709 [details] [associations]
symbol:SPO_2709 "endoribonuclease L-PSP, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 RefSeq:YP_167919.1 ProteinModelPortal:Q5LPY7
GeneID:3194321 KEGG:sil:SPO2709 PATRIC:23378833 OMA:IMVEIEA
Uniprot:Q5LPY7
Length = 134
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 20 QAVQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
+A++ + ++++G + + VE Q + L ++ L AG + + VVK + L
Sbjct: 24 RAIRAGDFVFLTGQIPMRDGVPITTGSVEEQTRAVLDDITATLALAGCTRDDVVKAMVWL 83
Query: 80 NDINDFATVNNVYGQFFKPPYPARSTFQVGKLPLID 115
+DF N VYG++F P RS V L L+D
Sbjct: 84 RARSDFPGFNAVYGEYFPHDPPTRSAV-VSDL-LVD 117
>CGD|CAL0002720 [details] [associations]
symbol:orf19.839 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] CGD:CAL0002720 Pfam:PF01042 GO:GO:0035690
Gene3D:3.40.50.620 InterPro:IPR014729 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 EMBL:AACQ01000019
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290 eggNOG:COG0251
InterPro:IPR006175 RefSeq:XP_720963.1 ProteinModelPortal:Q5AHF8
GeneID:3637399 KEGG:cal:CaO19.839 Uniprot:Q5AHF8
Length = 646
Score = 99 (39.9 bits), Expect = 0.00037, P = 0.00037
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 25 DNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIND 84
+ TLYIS + + ++ +E+Q K + +L + + + T+LL+D+++
Sbjct: 314 ETTLYISNLTSMKST-------IEDQTKDIFQQLDKLLGDHKLTVNDIQHITLLLSDMSN 366
Query: 85 FATVNNVYGQFFKPPY--PARSTFQVGKLPLIDFCLVVL 121
FA VN YG FFK Y P+R + ++ I +VL
Sbjct: 367 FAKVNKFYGTFFKDIYLPPSRICIET-EVESIQLSCIVL 404
>UNIPROTKB|Q5AHF8 [details] [associations]
symbol:CaO19.839 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] CGD:CAL0002720 Pfam:PF01042 GO:GO:0035690
Gene3D:3.40.50.620 InterPro:IPR014729 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 EMBL:AACQ01000019
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290 eggNOG:COG0251
InterPro:IPR006175 RefSeq:XP_720963.1 ProteinModelPortal:Q5AHF8
GeneID:3637399 KEGG:cal:CaO19.839 Uniprot:Q5AHF8
Length = 646
Score = 99 (39.9 bits), Expect = 0.00037, P = 0.00037
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 25 DNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLNDIND 84
+ TLYIS + + ++ +E+Q K + +L + + + T+LL+D+++
Sbjct: 314 ETTLYISNLTSMKST-------IEDQTKDIFQQLDKLLGDHKLTVNDIQHITLLLSDMSN 366
Query: 85 FATVNNVYGQFFKPPY--PARSTFQVGKLPLIDFCLVVL 121
FA VN YG FFK Y P+R + ++ I +VL
Sbjct: 367 FAKVNKFYGTFFKDIYLPPSRICIET-EVESIQLSCIVL 404
>TIGR_CMR|SPO_2949 [details] [associations]
symbol:SPO_2949 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
HOGENOM:HOG000267214 OMA:CGQVCKD RefSeq:YP_168157.1
ProteinModelPortal:Q5LP99 GeneID:3195985 KEGG:sil:SPO2949
PATRIC:23379331 Uniprot:Q5LP99
Length = 114
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 22 VQHDNTLYISGVLGIDASSGKMAEGVENQAKQALTNMGHILKEAGGSYEHVVKTTILLND 81
V+H+ Y+ G +G SG + V Q + L + +L EAG +++ + L D
Sbjct: 16 VKHNGVAYLCGQVG----SG---DSVAEQTRDCLARVDALLAEAGSDNTRILQAIVWLAD 68
Query: 82 INDFATVNNVYGQFFKPPY-PARS 104
+ DFA +N V+ + + PAR+
Sbjct: 69 MADFAEMNAVWDAWVPAGHAPARA 92
>ZFIN|ZDB-GENE-050227-15 [details] [associations]
symbol:atpbd4 "ATP binding domain 4" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0017178
"diphthine-ammonia ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] Pfam:PF01042
ZFIN:ZDB-GENE-050227-15 Gene3D:3.40.50.620 InterPro:IPR014729
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GeneTree:ENSGT00420000029820 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 InterPro:IPR006175 EMBL:CU915812 EMBL:CU927916
IPI:IPI00554409 Ensembl:ENSDART00000126277 Bgee:E7F9Q1
Uniprot:E7F9Q1
Length = 456
Score = 94 (38.1 bits), Expect = 0.00079, P = 0.00079
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 22 VQHDNTLYISGVLGIDASSGKMAE--GVENQAKQALTNMGHILKEAGGSYEHVVKTTILL 79
V H ++ SG I S +E +++QA+ T + L+E G + HV+ + +
Sbjct: 306 VSHSSSS--SGFQWISGLSALPSEHPDIQSQAQHVFTLLQSRLQEMGSALRHVLLVHLYV 363
Query: 80 NDINDFATVNNVYGQFFKPPYPARSTFQVGKLPL 113
+ + DF +N++Y + F PAR Q LP+
Sbjct: 364 SSMQDFGLINSIYSRLFTHNPPARVCVQAS-LPV 396
>TIGR_CMR|SPO_3680 [details] [associations]
symbol:SPO_3680 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 OMA:EWLVEID ProtClustDB:CLSK869315
RefSeq:YP_168875.1 ProteinModelPortal:Q5LM83 GeneID:3195750
KEGG:sil:SPO3680 PATRIC:23380847 Uniprot:Q5LM83
Length = 138
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 50 QAKQALTNMGHILKEAGGSYEHVVKTTILLNDINDFATVNNVYGQFFKPPYPARSTFQVG 109
Q + + N+ +++EAGG H+VK + + D+ V G++ K +P + V
Sbjct: 60 QTHKVMQNIKQLIEEAGGEMAHLVKVVVYITDVRHREAVYRTMGEYIKGVHPVSTGLVVQ 119
Query: 110 KL 111
L
Sbjct: 120 AL 121
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 127 115 0.00091 102 3 11 22 0.46 30
29 0.45 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 534 (57 KB)
Total size of DFA: 112 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.90u 0.14s 13.04t Elapsed: 00:00:00
Total cpu time: 12.91u 0.14s 13.05t Elapsed: 00:00:00
Start: Thu Aug 15 12:23:48 2013 End: Thu Aug 15 12:23:48 2013