BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1839
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48760|FOLC_MOUSE Folylpolyglutamate synthase, mitochondrial OS=Mus musculus GN=Fpgs
PE=1 SV=3
Length = 587
Score = 167 bits (423), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 114/170 (67%), Gaps = 2/170 (1%)
Query: 2 TRFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAE-DMPAYFKFLTVM 60
T FFSSPH+++VRERI++NG+PIS + FTK+FW +YN L + + MP+YF+FLT+M
Sbjct: 125 TGFFSSPHMVQVRERIRINGKPISPELFTKHFWCLYNQLEEFKDDSHVSMPSYFRFLTLM 184
Query: 61 SFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKA 120
+F+VF++EK D ++EVGIGG +D TNII V G++SLG DHT++LG+T+E+I QK
Sbjct: 185 AFHVFLQEKVDLAVVEVGIGGAFDCTNIIRKPVVCGVSSLGIDHTSLLGDTVEKIAWQKG 244
Query: 121 GIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAPSILNYRWRGQPL 170
GI KP A T GP +L + ++ + C L P + G PL
Sbjct: 245 GIFKPGVPAFTVVQPEGPLA-VLRDRAQQIGCPLYLCPPLEALEEVGLPL 293
>sp|Q924L9|FOLC_CRIGR Folylpolyglutamate synthase, mitochondrial OS=Cricetulus griseus
GN=FPGS PE=2 SV=1
Length = 587
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 114/170 (67%), Gaps = 2/170 (1%)
Query: 2 TRFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAE-DMPAYFKFLTVM 60
T FFSSPHL++VRERI++NG+PIS + FTK+FW +Y+ L + + MPAYF+FLT+M
Sbjct: 125 TGFFSSPHLVQVRERIRINGKPISPELFTKHFWRLYHQLEEFKDDSHVAMPAYFRFLTLM 184
Query: 61 SFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKA 120
+F+VF++EK D ++EVGIGG YD TNII V G++SLG DHT++LG+T+E+I QK
Sbjct: 185 AFHVFLQEKVDLAVVEVGIGGAYDCTNIIRKPVVCGVSSLGMDHTSLLGDTVEKIAWQKG 244
Query: 121 GIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAPSILNYRWRGQPL 170
GI KP A T GP +L + ++ +C L P + G PL
Sbjct: 245 GIFKPGVPAFTVLQPEGPLA-VLRDRAQQTSCPLYLCPPLEALEDGGLPL 293
>sp|Q05932|FOLC_HUMAN Folylpolyglutamate synthase, mitochondrial OS=Homo sapiens GN=FPGS
PE=1 SV=3
Length = 587
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 112/170 (65%), Gaps = 2/170 (1%)
Query: 2 TRFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALH-AKRKHAEDMPAYFKFLTVM 60
T FFSSPHL++VRERI++NG+PIS + FTKYFW +Y+ L K MP YF+FLT+M
Sbjct: 125 TGFFSSPHLVQVRERIRINGQPISPELFTKYFWRLYHRLEETKDGSCVSMPPYFRFLTLM 184
Query: 61 SFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKA 120
+F+VF++EK D ++EVGIGG YD TNII V G++SLG DHT++LG+T+E+I QK
Sbjct: 185 AFHVFLQEKVDLAVVEVGIGGAYDCTNIIRKPVVCGVSSLGIDHTSLLGDTVEKIAWQKG 244
Query: 121 GIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAPSILNYRWRGQPL 170
GI K A T GP +L + ++ ++C L P + G PL
Sbjct: 245 GIFKQGVPAFTVLQPEGPLA-VLRDRAQQISCPLYLCPMLEALEEGGPPL 293
>sp|A6H751|FOLC_BOVIN Folylpolyglutamate synthase, mitochondrial OS=Bos taurus GN=FPGS
PE=2 SV=1
Length = 585
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 111/171 (64%), Gaps = 3/171 (1%)
Query: 2 TRFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAE--DMPAYFKFLTV 59
T FFSSPHL++VRERI++NG+PIS + FTK+FW +Y+ L + + MP YF+FLT+
Sbjct: 122 TGFFSSPHLVQVRERIRINGQPISSELFTKHFWRLYHRLEETKDDSSCVSMPGYFRFLTL 181
Query: 60 MSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQK 119
M+F+VF++EK D ++EVGIGG YD TNII V GITSLG DHT +LG+T+E+I QK
Sbjct: 182 MAFHVFLQEKVDLAVLEVGIGGAYDCTNIIRKPVVCGITSLGIDHTGLLGDTMEKIAWQK 241
Query: 120 AGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAPSILNYRWRGQPL 170
GI K A T P +L + ++ ++C L P + G PL
Sbjct: 242 GGIFKSGVPAFTVLQPDEPLA-VLRDRAQQISCPLYLCPPLQALEEGGPPL 291
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 270 LDPSKEYHILVTGSLHLVGAFLNVL 294
L + + H+LVTGSLHLVG L +L
Sbjct: 555 LQEAADIHVLVTGSLHLVGGVLKLL 579
>sp|Q8W035|FPGS3_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS3 PE=1
SV=1
Length = 492
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 87/133 (65%)
Query: 2 TRFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMS 61
T F+SPHLI+VRER +LNG IS +KF YFW ++ L K + MP YF FL +++
Sbjct: 87 TGLFTSPHLIDVRERFRLNGIEISQEKFVNYFWCCFHKLKEKTSNEVPMPTYFCFLALLA 146
Query: 62 FYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAG 121
F +F E+ D VI+EVG+GGR+D TN+I V GI+SLGYDH +LG T+ EI +KAG
Sbjct: 147 FKIFTTEQVDVVILEVGLGGRFDATNVIQKPVVCGISSLGYDHMEILGYTLAEIAAEKAG 206
Query: 122 IMKPNCIAVTSAN 134
I K A T A
Sbjct: 207 IFKSGVPAFTVAQ 219
>sp|Q09509|FOLC_CAEEL Putative folylpolyglutamate synthase OS=Caenorhabditis elegans
GN=F25B5.6 PE=2 SV=1
Length = 510
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
Query: 2 TRFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMS 61
T F+SSPHL+ VRERI+++G+P+S F + F+ VY+ + KR+H+++MPAYFKFLT+++
Sbjct: 117 TGFYSSPHLVHVRERIQVDGQPVSEQMFAEEFFHVYDII--KREHSDNMPAYFKFLTLLA 174
Query: 62 FYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAG 121
F +FVK +I+EVGIGG YD TN++ V G+T+L YDH ++LGN + EI KAG
Sbjct: 175 FRIFVKLNVQVMILEVGIGGEYDCTNVVEKPKVCGVTTLDYDHMSILGNKLSEIAWHKAG 234
Query: 122 IMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAPSILNYRW 165
I K + A S +++L+ + + + L + P + Y++
Sbjct: 235 IFKESVPAFYSPTTT-EAEEVLIARAISKHVPLFQTPPVSAYQF 277
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 257 FSSVLDTYNFKYGLDPSKEYHILVTGSLHLVGAFLNV 293
F + Y F S+E +LVTGSLHLVG LN+
Sbjct: 469 FDCISSAYKFIESQAASQEILVLVTGSLHLVGGVLNL 505
>sp|O74742|FOLE_SCHPO Probable folylpolyglutamate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=met7 PE=2 SV=1
Length = 505
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 90/128 (70%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSFY 63
++SPHL V ERI+LNG+PIS + FTKYF+ V+ L + P YF+FLT+M+++
Sbjct: 118 MYTSPHLRSVCERIQLNGKPISQELFTKYFFDVWERLENAVGSDSEKPMYFRFLTLMAWH 177
Query: 64 VFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIM 123
VF+ E DA I+EVGIGG YD+TN+I +TSLG DHT++LGNTI EI QKAGI
Sbjct: 178 VFISENVDAAIIEVGIGGEYDSTNLIEKPYATAVTSLGLDHTSLLGNTIAEIAWQKAGIY 237
Query: 124 KPNCIAVT 131
K + IA+T
Sbjct: 238 KESAIALT 245
>sp|Q54CY5|FOLC_DICDI Putative folylpolyglutamate synthase OS=Dictyostelium discoideum
GN=folC PE=3 SV=1
Length = 626
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 2 TRFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMS 61
T F+SPHLI RERI++NGE IS + F++YFW ++ L + + +P +F++LT+M+
Sbjct: 163 TGLFTSPHLISPRERIRINGEMISKEMFSQYFWNCWDLL--IKDYQTQLPNFFRYLTLMA 220
Query: 62 FYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAG 121
+F E I+EVGIGGR D+TN+ P V GI++LGYDH +LGNT+ EI ++KAG
Sbjct: 221 LKIFQDEAIQCTILEVGIGGRMDSTNVFPKPMVTGISALGYDHQNLLGNTLAEIALEKAG 280
Query: 122 IMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAPSILNY 163
IMK T ++Q +L++ S + L PSI Y
Sbjct: 281 IMKVGIPIFTVSSQLPEAINVLIDHSNKVKSPLSIVPSIDQY 322
>sp|F4J2K2|FPGS2_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS2 PE=1
SV=1
Length = 625
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 85/130 (65%)
Query: 2 TRFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMS 61
T F+SPHLI+VRER +++G IS +KF +YFW + L K MP F+FLTV++
Sbjct: 160 TGMFTSPHLIDVRERFRIDGLDISEEKFLQYFWECWKLLKEKAVDGLTMPPLFQFLTVLA 219
Query: 62 FYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAG 121
F +FV EK D ++EVG+GG+ D+TN+I V GI SLG DH +LGNT+ +I KAG
Sbjct: 220 FKIFVCEKVDVAVIEVGLGGKLDSTNVIQKPVVCGIASLGMDHMDILGNTLADIAFHKAG 279
Query: 122 IMKPNCIAVT 131
I KP A T
Sbjct: 280 IFKPQIPAFT 289
>sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS1 PE=1
SV=1
Length = 571
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 86/130 (66%)
Query: 2 TRFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMS 61
T F+SPHLI+VRER +L+G IS +KF YFW YN L + MP YF+FL +++
Sbjct: 141 TGLFTSPHLIDVRERFRLDGVDISEEKFLGYFWWCYNRLKERTNEEIPMPTYFRFLALLA 200
Query: 62 FYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAG 121
F +F E+ DA I+EVG+GG++D TN + V GI+SLGYDH +LG+T+ +I +KAG
Sbjct: 201 FKIFAAEEVDAAILEVGLGGKFDATNAVQKPVVCGISSLGYDHMEILGDTLGKIAGEKAG 260
Query: 122 IMKPNCIAVT 131
I K A T
Sbjct: 261 IFKLGVPAFT 270
>sp|E7Q9C7|FOLE_YEASB Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
FostersB) GN=MET7 PE=3 SV=2
Length = 548
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 95/164 (57%), Gaps = 8/164 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAPS 159
K GI K A T Q IL E + L E PS
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVPS 317
>sp|E7NMM0|FOLE_YEASO Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
FostersO) GN=MET7 PE=3 SV=2
Length = 548
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 95/164 (57%), Gaps = 8/164 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAPS 159
K GI K A T Q IL E + L E PS
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVPS 317
>sp|B5VSC3|FOLE_YEAS6 Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=MET7 PE=3 SV=2
Length = 548
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAP 158
K GI K A T Q IL E + L E P
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVP 316
>sp|E7QKX4|FOLE_YEASZ Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
Zymaflore VL3) GN=MET7 PE=3 SV=2
Length = 548
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAP 158
K GI K A T Q IL E + L E P
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVP 316
>sp|Q08645|FOLE_YEAST Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MET7 PE=1 SV=1
Length = 548
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAP 158
K GI K A T Q IL E + L E P
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVP 316
>sp|E7KUJ4|FOLE_YEASL Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
Lalvin QA23) GN=MET7 PE=3 SV=2
Length = 548
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAP 158
K GI K A T Q IL E + L E P
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVP 316
>sp|E7KIA3|FOLE_YEASA Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
AWRI796) GN=MET7 PE=3 SV=2
Length = 548
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAP 158
K GI K A T Q IL E + L E P
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVP 316
>sp|C8ZGZ3|FOLE_YEAS8 Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=MET7 PE=3 SV=1
Length = 548
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAP 158
K GI K A T Q IL E + L E P
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVP 316
>sp|A6ZP80|FOLE_YEAS7 Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
YJM789) GN=MET7 PE=3 SV=1
Length = 548
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAP 158
K GI K A T Q IL E + L E P
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVP 316
>sp|B3LJR0|FOLE_YEAS1 Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=MET7 PE=3 SV=1
Length = 548
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMP--------AYFK 55
++SPHL VRERI++NGEPIS +KF KYF+ V++ L + + P YFK
Sbjct: 154 LYTSPHLKSVRERIRINGEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPGYFK 213
Query: 56 FLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEI 115
FLT++SF+ F++E + + EVG+GG D+TNII V G+T LG DHT +LG+TIEEI
Sbjct: 214 FLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCGVTLLGIDHTFMLGDTIEEI 273
Query: 116 TMQKAGIMKPNCIAVTSANQRGPCKQILLETSRALNCVLLEAP 158
K GI K A T Q IL E + L E P
Sbjct: 274 AWNKGGIFKSGAPAFTVEKQPPQGLTILKERAEERKTTLTEVP 316
>sp|Q9Y893|FOLE_CANAX Folylpolyglutamate synthase OS=Candida albicans GN=MET7 PE=3 SV=1
Length = 514
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 91/152 (59%), Gaps = 10/152 (6%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPA----------Y 53
++SPHL VRERI++NG+PI+ +KF KYF+ V++ + ++ P Y
Sbjct: 104 LYTSPHLKSVRERIRINGQPINQEKFAKYFFEVWDKFTTTKSDPQECPTLQPCDQVKPMY 163
Query: 54 FKFLTVMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIE 113
FK+LT++SF+VF++E D I EVG+GG YD+TNII V GI++LG DHT +LGN I
Sbjct: 164 FKYLTILSFHVFLQEGVDTAIYEVGVGGTYDSTNIIDKPTVTGISALGIDHTFMLGNNIA 223
Query: 114 EITMQKAGIMKPNCIAVTSANQRGPCKQILLE 145
IT K GI K A S P L+E
Sbjct: 224 SITENKTGIFKKGVPAFVSRQLEYPETHELIE 255
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 274 KEYHILVTGSLHLVGAFLNVLSN 296
K+ + V GSLHLVG FL VL N
Sbjct: 489 KDLQVFVCGSLHLVGGFLVVLDN 511
>sp|O13492|FOLE_NEUCR Folylpolyglutamate synthase OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=met-6 PE=1 SV=2
Length = 528
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDM-----PAYFKFLT 58
F+SPHLI VRERI+++ +PIS + F +YF+ V++ L + +++ P Y ++LT
Sbjct: 131 LFTSPHLIAVRERIRIDSKPISEELFARYFFEVWDRLETSQLAKDEVELGSKPIYARYLT 190
Query: 59 VMSFYVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQ 118
+MS++V++ E D I E GIGG YD TN++ V GI++LG DH VLG+T+++I
Sbjct: 191 LMSYHVYLSEGVDVAIYETGIGGEYDATNVVDRPVVSGISTLGIDHVFVLGDTVDKIAWH 250
Query: 119 KAGIMKPNCIAVT 131
KAGIMK A T
Sbjct: 251 KAGIMKTGSPAFT 263
>sp|Q05865|FOLC_BACSU Folylpolyglutamate synthase OS=Bacillus subtilis (strain 168)
GN=folC PE=3 SV=2
Length = 430
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 5 FSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSFYV 64
F+SP++I ERI +NG PIS +++T + + A + P F+ +T +F
Sbjct: 73 FTSPYIITFNERISVNGIPISDEEWTALVNQMKPHVEALDQTEYGQPTEFEIMTACAFLY 132
Query: 65 FVK-EKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIM 123
F + K D VI E G+GGR+D+TN++ V ITS+G+DH +LGNTIEEI +KAGI+
Sbjct: 133 FAEFHKVDFVIFETGLGGRFDSTNVVEPLLTV-ITSIGHDHMNILGNTIEEIAGEKAGII 191
Query: 124 KPNCIAVTSANQRGPCKQILLETSR 148
K VT+ Q + I E R
Sbjct: 192 KEGIPIVTAVTQPEALQVIRHEAER 216
>sp|P43775|FOLC_HAEIN Folylpolyglutamate synthase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=folC PE=3 SV=1
Length = 437
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 13/173 (7%)
Query: 5 FSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSFYV 64
+SSPHL+ ER+++ + + + T F + ++ + YF+F T+ + ++
Sbjct: 80 YSSPHLLRYNERVRIQNQDLPDEAHTASFAFI-------DENKTESLTYFEFSTLSALHL 132
Query: 65 FVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIMK 124
F + K D VI+EVG+GGR D TNI+ + V ITS+ DHT LG+T E I +KAGI +
Sbjct: 133 FKQAKLDVVILEVGLGGRLDATNIVDSHLAV-ITSIDIDHTDFLGDTREAIAFEKAGIFR 191
Query: 125 PNCIAVTSANQRGPCKQILLETSRALNCVLLEAPSILNYRWRGQPLDEDWKNR 177
NC V Q +L+ + L+C + A +++ + + W+N+
Sbjct: 192 ENCPVVIGEPN---VPQTMLDQAEKLHCQV--ARRDVDWLFEQNAENWQWQNK 239
>sp|Q12676|FOLD_YEAST Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FOL3 PE=1 SV=1
Length = 427
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 5 FSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSFYV 64
F++PHL+ V + I +N +PI +++ + L A K F+ LT +F
Sbjct: 56 FTTPHLVHVTDSITINNKPIPLERYQN----IRLQLEALNKSHSLKCTEFELLTCTAFKY 111
Query: 65 FVKEKPDAVIMEVGIGGRYDNTNIIP--NTAVVGITSLGYDHTAVLGNTIEEITMQKAGI 122
F + ++EVG+GGR D TN+IP N A GIT + DH + LGNT+ EI+ +KAGI
Sbjct: 112 FYDVQCQWCVIEVGLGGRLDATNVIPGANKACCGITKISLDHESFLGNTLSEISKEKAGI 171
Query: 123 M 123
+
Sbjct: 172 I 172
>sp|Q8K9X3|FOLC_BUCAP Bifunctional protein FolC OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=folC PE=3 SV=1
Length = 418
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSFY 63
++SPHLI ERIK+NG +S +++ L + YF+F+T+ + +
Sbjct: 74 LYTSPHLINYSERIKVNGLYLSEKD------HIFSFLIIDAEKGNVSLTYFEFITLSALF 127
Query: 64 VFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIM 123
+F + D +I+EVG+GGR D TNII + V IT++G DHT+ LG I +K+GI
Sbjct: 128 LFSQYSLDIIILEVGLGGRLDATNIIDSDLSV-ITNIGIDHTSCLGTDRISIGREKSGIF 186
Query: 124 KPNCIAV 130
+ IAV
Sbjct: 187 RKGKIAV 193
>sp|Q89AT2|FOLC_BUCBP Bifunctional protein FolC OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=folC PE=3 SV=1
Length = 426
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 14/171 (8%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSFY 63
++SPHL+ ER+++NG + + Y + +N K + + F+F+T+ +
Sbjct: 79 LYTSPHLMRYTERVRINGFELEH----LYHISAFN--DVKYFQNDVLLTRFEFITLSALI 132
Query: 64 VFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIM 123
+F D +I+EVG+GGR D TNI+ V IT++ DH+ +LG I+++K+GI
Sbjct: 133 LFKSYNLDIIILEVGLGGRLDATNILSADVSV-ITNIDIDHSKILGVNRSSISVEKSGIF 191
Query: 124 KPNCIAVTSANQRGPCKQILLETSRALNCVLLEAPSILNYRWRGQPLDEDW 174
+ N IA+ + N Q L + + I+N W + ++ +W
Sbjct: 192 RKNKIAIVADNNFPKVAQYLAKKKKV-------RLRIVNIDWIYKKIEFEW 235
>sp|P08192|FOLC_ECOLI Bifunctional protein FolC OS=Escherichia coli (strain K12) GN=folC
PE=1 SV=2
Length = 422
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 5 FSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSFYV 64
+SSPHL+ ER+++ G+ + T F + +A + YF++ T+ + ++
Sbjct: 81 YSSPHLVRYTERVRVQGQELPESAHTASFAEIESA------RGDISLTYFEYGTLSALWL 134
Query: 65 FVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIMK 124
F + + D VI+EVG+GGR D TNI+ + V +TS+ DHT LG E I +KAGI +
Sbjct: 135 FKQAQLDVVILEVGLGGRLDATNIV-DADVAVVTSIALDHTDWLGPDRESIGREKAGIFR 193
Query: 125 PNCIAVTSANQRGPCKQILLETSRALNCVLLEAPSILNYR---WRGQPLDEDW 174
A+ E + V E ++L R W D DW
Sbjct: 194 SEKPAIVGEP----------EMPSTIADVAQEKGALLQRRGVEWNYSVTDHDW 236
>sp|Q9UTD0|FOLD_SCHPO Probable folylpolyglutamate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fol3 PE=3 SV=1
Length = 417
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 5 FSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSFYV 64
++SPH +E R+ I +NG+ S + F + V R A + F+ LT +F
Sbjct: 56 YTSPHFLEPRDTISINGQIASEEIFNTCWKQVIEVDRRFRTKATE----FELLTATAFQC 111
Query: 65 FVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIMK 124
F ++E G+GGR D TN+ + I+ + DH A LGNT+E I +KAGI K
Sbjct: 112 FHHSGVRVAVIETGMGGRLDATNVFEEPVLSIISRICLDHQAFLGNTLEAIAKEKAGIFK 171
Query: 125 PN--CIAVTSANQRGPCKQILL--ETSRA 149
N C+ V N+ Q+ L E +RA
Sbjct: 172 KNVPCV-VDGLNEVNVLNQLKLSAEETRA 199
>sp|P15925|FOLC_LACCA Folylpolyglutamate synthase OS=Lactobacillus casei GN=fgs PE=1 SV=1
Length = 428
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDM-PAYFKFLTVMSF 62
++SP ++ ERI ++ EPI V AL ++ D F+F+T + +
Sbjct: 70 LYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALGY 129
Query: 63 YVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGI-TSLGYDHTAVLGNTIEEITMQKAG 121
+ F + + D ++EVGIGG D+TN+I T VV + T + DH +LG+TI I KAG
Sbjct: 130 WYFRQRQVDVAVIEVGIGGDTDSTNVI--TPVVSVLTEVALDHQKLLGHTITAIAKHKAG 187
Query: 122 IMKPNCIAVT 131
I+K VT
Sbjct: 188 IIKRGIPVVT 197
>sp|P57265|FOLC_BUCAI Bifunctional protein FolC OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=folC PE=3 SV=1
Length = 411
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 8/136 (5%)
Query: 4 FFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSFY 63
++SPHLI ER+++NG + ++ F V + + YF+F+T+ +
Sbjct: 74 LYTSPHLINFVERVRINGFVLHEEEHIDSFQNVELVRNGV------LLTYFEFITLAALI 127
Query: 64 VFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIM 123
+F + D +I++VG+GGR D TN I ++ + IT++G DHT++LG I +K G+
Sbjct: 128 LFKRYSLDCIILKVGLGGRLDATN-IIDSDISIITNIGIDHTSILGRDRISIAREKCGVF 186
Query: 124 KPNCIAVTSANQRGPC 139
+ N I+V PC
Sbjct: 187 RKNKISVIGETDI-PC 201
>sp|P36001|FOLC_YEAST Probable folylpolyglutamate synthase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RMA1 PE=1 SV=1
Length = 430
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 3 RFFSSPHLIEVRERIKLNGEPISYDKFTKYFWTVYNALHAKRKHAEDMPAYFKFLTVMSF 62
R+ +S L E I +N E IS ++++ + A + + ++ + LT ++
Sbjct: 63 RYTTSSLLNAKEEDISINNEAISLIEYSRIEKELIEADSSLKLQCNNL----ELLTSVAL 118
Query: 63 YVFVKEKPDAVIMEVGIGGRYDNTNIIPNTAVV--GITSLGYDHTAVLGNTIEEIT 116
F K+ I+E G+ G+ D +II + V IT++G A L + +IT
Sbjct: 119 VYFAKKNCQWCIIETGLAGKQDPGSIIAGQSRVCCAITNVGISDEAFLCKFLSQIT 174
>sp|Q8LGE3|ARP6_ARATH Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1
Length = 421
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 74 IMEVGIGGRYDNTNIIPNTAVVGITSLGYDHTAVLGNTIEEITMQKAGIMKP 125
+++ G GG D T +IPN ++S + H + L +EI + A + +P
Sbjct: 13 LIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTTLSDEIDLTSAAVRRP 64
>sp|Q0VM28|HEM3_ALCBS Porphobilinogen deaminase OS=Alcanivorax borkumensis (strain SK2 /
ATCC 700651 / DSM 11573) GN=hemC PE=3 SV=1
Length = 310
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 198 PNVGQGGGGFQSRSGDNSIRSNANPLSSVD 227
P VGQG G + R GD S +PLS VD
Sbjct: 194 PAVGQGAVGIECREGDESTIELLSPLSDVD 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,456,317
Number of Sequences: 539616
Number of extensions: 4942175
Number of successful extensions: 13395
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 13294
Number of HSP's gapped (non-prelim): 87
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)