BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1840
(423 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 22/187 (11%)
Query: 9 EAITPNPLSPFNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADF 68
E + P PL + ++V + + GM++L + H +L + NCL+ V++I DF
Sbjct: 148 EDVAPGPLGLGQL----LAVASQVAAGMVYLAGLHFV-HRDLATRNCLVGQGLVVKIGDF 202
Query: 69 GLH--AFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI--G 124
G+ + G L R + L R + T + DV+SFG+VL+E+ G
Sbjct: 203 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR-----KFTTESDVWSFGVVLWEIFTYG 257
Query: 125 RQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFV 183
+Q PW ++++ E I +TQG L RP C P + A MR CW+ +P+ R ++ V
Sbjct: 258 KQ-PW--YQLSNTEAIDCITQGRELERPRA----CPPEVYAIMRGCWQREPQQRHSIKDV 310
Query: 184 HHKLKEM 190
H +L+ +
Sbjct: 311 HARLQAL 317
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 22/187 (11%)
Query: 9 EAITPNPLSPFNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADF 68
E + P PL + ++V + + GM++L + H +L + NCL+ V++I DF
Sbjct: 125 EDVAPGPLGLGQL----LAVASQVAAGMVYLAGLHFV-HRDLATRNCLVGQGLVVKIGDF 179
Query: 69 GLH--AFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI--G 124
G+ + G L R + L R + T + DV+SFG+VL+E+ G
Sbjct: 180 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR-----KFTTESDVWSFGVVLWEIFTYG 234
Query: 125 RQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFV 183
+Q PW ++++ E I +TQG L RP C P + A MR CW+ +P+ R ++ V
Sbjct: 235 KQ-PW--YQLSNTEAIDCITQGRELERPRA----CPPEVYAIMRGCWQREPQQRHSIKDV 287
Query: 184 HHKLKEM 190
H +L+ +
Sbjct: 288 HARLQAL 294
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 22/187 (11%)
Query: 9 EAITPNPLSPFNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADF 68
E + P PL + ++V + + GM++L + H +L + NCL+ V++I DF
Sbjct: 119 EDVAPGPLGLGQL----LAVASQVAAGMVYLAGLHFV-HRDLATRNCLVGQGLVVKIGDF 173
Query: 69 GLH--AFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI--G 124
G+ + G L R + L R + T + DV+SFG+VL+E+ G
Sbjct: 174 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR-----KFTTESDVWSFGVVLWEIFTYG 228
Query: 125 RQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFV 183
+Q PW ++++ E I +TQG L RP C P + A MR CW+ +P+ R ++ V
Sbjct: 229 KQ-PW--YQLSNTEAIDCITQGRELERPRA----CPPEVYAIMRGCWQREPQQRHSIKDV 281
Query: 184 HHKLKEM 190
H +L+ +
Sbjct: 282 HARLQAL 288
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 26 ISVNTTASVGMIHLHD-SEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQER 84
+S+ + GM +LH+ + I H NL+S N L+D ++ +++ DFGL KA + +
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA 199
Query: 85 KLRRRKLYKAPELLR-QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSV 143
+ APE+LR +P +K DVYSFG++L+E+ Q PWG+L +++ +V
Sbjct: 200 AGTPE--WMAPEVLRDEP----SNEKSDVYSFGVILWELATLQQPWGNL--NPAQVVAAV 251
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G + + P + A + CW +P RP + L+ +
Sbjct: 252 --GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 5/167 (2%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q +
Sbjct: 111 IDIARQTARGMDYLHAKSII-HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ 169
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II V +
Sbjct: 170 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGR 228
Query: 146 GSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
GS L PD S + +C + M C ++ + RP + +++E+
Sbjct: 229 GS-LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 26 ISVNTTASVGMIHLHD-SEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQER 84
+S+ + GM +LH+ + I H +L+S N L+D ++ +++ DFGL KA +
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASX--FLXSK 197
Query: 85 KLRRRKLYKAPELLR-QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSV 143
+ APE+LR +P +K DVYSFG++L+E+ Q PWG+L +++ +V
Sbjct: 198 XAAGTPEWMAPEVLRDEP----SNEKSDVYSFGVILWELATLQQPWGNL--NPAQVVAAV 251
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G + + P + A + CW +P RP + L+ +
Sbjct: 252 --GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 5/167 (2%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q +
Sbjct: 123 IDIARQTARGMDYLHAKSII-HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II V +
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGR 240
Query: 146 GSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
GS L PD S + +C + M C ++ + RP + +++E+
Sbjct: 241 GS-LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 104 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 221
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 222 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 109 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 226
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 227 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 132 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 190
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 249
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 250 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 131 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 189
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 190 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 248
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 249 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 285
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 104 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 221
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 222 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 5/167 (2%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q +
Sbjct: 123 IDIARQTARGMDYLHAKSII-HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II V +
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGR 240
Query: 146 GSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
GS L PD S + +C + M C ++ + RP + +++E+
Sbjct: 241 GS-LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 106 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 164
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 165 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 223
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 224 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 260
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 109 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 226
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 227 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 124 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 182
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 183 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 241
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 242 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 278
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 104 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 162
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 221
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 222 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I I + + GM +LH II H +L+S+N + ++I DFGL K+ + Q
Sbjct: 132 IKLIDIARQTAQGMDYLHAKSII-HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 190
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITS 142
+L L+ APE++R + + DVY+FG+VLYE++ Q P+ ++ D +II
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFM 249
Query: 143 VTQGSGLRPDTSSL--DCAPSIIACMRTCWEEDPELRP 178
V +G L PD S + +C ++ M C ++ + RP
Sbjct: 250 VGRGY-LSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 12/175 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM +LH II H +++S+N + ++I DFGL K+ + Q +
Sbjct: 135 IDIARQTAQGMDYLHAKNII-HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
L+ APE++R + + DVYS+G+VLYE++ + P+ H+ D +II V +
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGR 252
Query: 146 GSGLRPDTSSL--DCAPS----IIACMRTCWEED---PELRPDLRFVHHKLKEMN 191
G PD S L +C + + C++ EE P++ + + H L ++N
Sbjct: 253 GYA-SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKIN 306
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H NLR++N L+ +IADFGL + T +E K + A
Sbjct: 117 GMAFIEERNYI-HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 175 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 229
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 230 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 263
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 123 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 180
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 181 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 235
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 236 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 269
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 121 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 178
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 179 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 233
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 234 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 122 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 179
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 180 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 234
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 235 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 268
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
IS + GM +L + + + H +L + NC++D + +++ADFGL A E ++
Sbjct: 127 ISFGLQVARGMEYLAEQKFV-HRDLAARNCMLDESFTVKVADFGL-ARDILDREYYSVQQ 184
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGP-WGHLRMTDEEIITSVT 144
R +L L R T K DV+SFG++L+E++ R P + H+ D + +
Sbjct: 185 HRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD--LTHFLA 242
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKANIF 199
QG L +P+ C S+ M+ CWE DP +RP R + +++++ + L + +
Sbjct: 243 QGRRLPQPEY----CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 130 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 187
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 188 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 242
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 243 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 276
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 121 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 178
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 179 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 233
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 234 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 129 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 186
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 187 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 241
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 242 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 121 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTA 178
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 179 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 233
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 234 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 127 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 184
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 185 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 239
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 240 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 126 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTA 183
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 184 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 238
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 239 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 127 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTA 184
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 185 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 239
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 240 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 116 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTA 173
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 174 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 228
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 229 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 121 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTA 178
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 179 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 233
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 234 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM + + I H +LR++N L+ +IADFGL + T +E K + A
Sbjct: 131 GMAFIEERNYI-HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTA 188
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE + T K DV+SFG++L E++ G + MT+ E+I ++ +G + RPD
Sbjct: 189 PEAINYGTF---TIKSDVWSFGILLTEIV-THGRIPYPGMTNPEVIQNLERGYRMVRPD- 243
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+C + MR CW+E PE RP ++ L++
Sbjct: 244 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 277
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLH--AFKAGQDETGQE 83
+ + + GM++L + H +L + NCL+ +++I DFG+ + G
Sbjct: 131 LHIAQQIAAGMVYLASQHFV-HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI--GRQGPWGHLRMTDEEIIT 141
L R + + R + T + DV+S G+VL+E+ G+Q PW ++++ E+I
Sbjct: 190 TMLPIRWMPPESIMYR-----KFTTESDVWSLGVVLWEIFTYGKQ-PW--YQLSNNEVIE 241
Query: 142 SVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+TQG L RP T C + M CW+ +P +R +++ +H L+ +
Sbjct: 242 CITQGRVLQRPRT----CPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
S GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 134 SAGMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIP 190
Query: 92 --YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE + + T DV+S+G+V++EV+ G + MT++++I +V +G L
Sbjct: 191 IRWTAPEAI---AFRKFTSASDVWSYGIVMWEVVS-YGERPYWEMTNQDVIKAVEEGYRL 246
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
S +DC ++ M CW+++ RP + + L ++
Sbjct: 247 ---PSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ I H +LRS+N L+ + + +IADFGL + T ++
Sbjct: 108 VDMAAQVAAGMAYIERMNYI-HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGA 166
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E++ + G + M + E++ V +
Sbjct: 167 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELVTK-GRVPYPGMNNREVLEQVER 221
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + DC S+ M CW++DPE RP ++ L++
Sbjct: 222 GYRM---PCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLED 262
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM ++ I H +LR++N L+ + +IADFGL + T +E
Sbjct: 113 IDFSAQIAEGMAYIERKNYI-HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA 171
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE + + T K DV+SFG++LYE++ G + T+ +++T+++Q
Sbjct: 172 KFPIK-WTAPEAI---NFGCFTIKSDVWSFGILLYEIV-TYGKIPYPGRTNADVMTALSQ 226
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G + P +C + M+ CW+E E RP ++ L +
Sbjct: 227 GYRM-PRVE--NCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDF 268
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM + I H +LR++N L+ + V +IADFGL + T +E
Sbjct: 114 IDFSAQIAEGMAFIEQRNYI-HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 172
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE + + T K DV+SFG++L E++ G + M++ E+I ++ +
Sbjct: 173 KFPIK-WTAPEAI---NFGSFTIKSDVWSFGILLMEIV-TYGRIPYPGMSNPEVIRALER 227
Query: 146 GSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G + RP+ +C + M CW+ PE RP ++ L +
Sbjct: 228 GYRMPRPE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 19/171 (11%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L+ ++ + H +L + NC++ + ++I DFG+ ET RK + L
Sbjct: 135 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGM---TRDIXETDXXRKGGKGLLPVR 190
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL- 149
+ +PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L
Sbjct: 191 WMSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLD 245
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
+PD +C ++ MR CW+ +P++RP L + +EM G + F
Sbjct: 246 KPD----NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 292
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM L + I H +L + NCL+D ++++DFG+ + D+ + + A
Sbjct: 116 GMAFLESHQFI-HRDLAARNCLVDRDLCVKVSDFGMTRY-VLDDQYVSSVGTKFPVKWSA 173
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE+ H + + K DV++FG++++EV G + T+ E++ V+QG L RP
Sbjct: 174 PEVF---HYFKYSSKSDVWAFGILMWEVFSL-GKMPYDLYTNSEVVLKVSQGHRLYRPHL 229
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLR 181
+S +I M +CW E PE RP +
Sbjct: 230 AS----DTIYQIMYSCWHELPEKRPTFQ 253
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 130 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 186
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 187 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 242
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+DC ++ M CW++D RP + L ++
Sbjct: 243 ---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 130 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 186
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 187 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 242
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+DC ++ M CW++D RP + L ++
Sbjct: 243 ---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 159 GMKYLSDMGFV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 215
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 216 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 272 ---PMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 147 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 203
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 204 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 259
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+DC ++ M CW++D RP + L ++
Sbjct: 260 ---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 19/171 (11%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L+ ++ + H +L + NC++ + ++I DFG+ ET RK + L
Sbjct: 144 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGM---TRDIXETDXXRKGGKGLLPVR 199
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL- 149
+ +PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L
Sbjct: 200 WMSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLD 254
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
+PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 255 KPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 301
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 23/167 (13%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDET---------GQE 83
+ GM +L D + H +L + N L++S V +++DFGL F +D+T G +
Sbjct: 145 AAGMKYLADMNYV-HRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGK 201
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSV 143
+R + APE ++ T DV+S+G+V++EV+ G + MT++++I ++
Sbjct: 202 IPIR----WTAPEAIQYRKF---TSASDVWSYGIVMWEVMS-YGERPYWDMTNQDVINAI 253
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
Q L P +DC ++ M CW++D RP + + L +M
Sbjct: 254 EQDYRLPP---PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 157 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 213
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 214 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 269
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 270 ---PMDCPAALYQLMLDCWQKDRNNRP 293
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 159 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 215
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 216 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 272 ---PMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM +L + + + H +L + NCL+ V++IADFGL D +
Sbjct: 177 LCIARQVAAGMAYLSERKFV-HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 235
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI--GRQGPWGHLRMTDEEIITSV 143
+ PE + R T + DV+++G+VL+E+ G Q +G M EE+I V
Sbjct: 236 DAIPIRWMPPESI---FYNRYTTESDVWAYGVVLWEIFSYGLQPYYG---MAHEEVIYYV 289
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G+ L +C + MR CW + P RP +H L+ M
Sbjct: 290 RDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 159 GMKYLSDMGAV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 215
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 216 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 272 ---PMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 159 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 215
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 216 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 272 ---PMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 159 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 215
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 216 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 272 ---PMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 159 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 215
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 216 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 272 ---PMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM + I H +LR++N L+ + V +IADFGL + T +E
Sbjct: 287 IDFSAQIAEGMAFIEQRNYI-HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 345
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE + + T K DV+SFG++L E++ G + M++ E+I ++ +
Sbjct: 346 KFPIK-WTAPEAI---NFGSFTIKSDVWSFGILLMEIV-TYGRIPYPGMSNPEVIRALER 400
Query: 146 GSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G + RP+ +C + M CW+ PE RP ++ L +
Sbjct: 401 GYRMPRPE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 159 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLS--RVLEDDPEAAYTTRGGKIPIR 215
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 216 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 272 ---PMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 159 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLA--RVLEDDPEAAYTTRGGKIPIR 215
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 216 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 272 ---PMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC++ + ++I DFG+ ++ G + L R +
Sbjct: 141 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 197
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 198 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 252
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 253 PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 298
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC++ + ++I DFG+ ++ G + L R +
Sbjct: 143 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 199
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 200 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 254
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 255 PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 300
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC++ + ++I DFG+ ++ G + L R +
Sbjct: 172 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 228
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 229 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 283
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 284 PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 329
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N LI+S V +++DFGL + +D+ R K+
Sbjct: 159 GMKYLSDMGYV-HRDLAARNILINSNLVCKVSDFGLG--RVLEDDPEAAYTTRGGKIPIR 215
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ +PE + T DV+S+G+VL+EV+ G + M+++++I +V +G L P
Sbjct: 216 WTSPEAIAYRKF---TSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
+DC ++ M CW++D RP
Sbjct: 272 ---PMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC++ + ++I DFG+ ++ G + L R +
Sbjct: 144 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 200
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 201 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 255
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 256 PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 301
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC++ + ++I DFG+ ++ G + L R +
Sbjct: 150 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 206
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 207 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 261
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 262 PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 307
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC++ + ++I DFG+ ++ G + L R +
Sbjct: 143 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 199
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 200 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 254
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 255 PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 300
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 20 NIPIGSIS-VNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQD 78
IP+ +++ + S+GM +L + + H NL + N L+ +R +I+DFGL D
Sbjct: 432 EIPVSNVAELLHQVSMGMKYLEEKNFV-HRNLAARNVLLVNRHYAKISDFGLSKALGADD 490
Query: 79 ETGQERKLRRRKL-YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTD 136
R + L + APE + + + + + DV+S+G+ ++E + Q P+ +M
Sbjct: 491 SYYTARSAGKWPLKWYAPECI---NFRKFSSRSDVWSYGVTMWEALSYGQKPYK--KMKG 545
Query: 137 EEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKA 196
E++ + QG + +C P + A M CW E RPD V +++ L +
Sbjct: 546 PEVMAFIEQGKRME---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602
Query: 197 NI 198
+
Sbjct: 603 KV 604
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC++ + ++I DFG+ ++ G + L R +
Sbjct: 150 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 206
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 207 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 261
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 262 PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 307
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC++ + ++I DFG+ ++ G + L R +
Sbjct: 140 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 196
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 197 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 251
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 252 PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 297
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC++ + ++I DFG+ ++ G + L R +
Sbjct: 137 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 193
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 194 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 248
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C + MR CW+ +P++RP L + +EM G + F
Sbjct: 249 PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 294
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLH--AFKAGQDETGQE 83
+ + + + GM++L + H +L + NCL+ + +++I DFG+ + G
Sbjct: 136 LHIASQIASGMVYLASQHFV-HRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI--GRQGPWGHLRMTDEEIIT 141
L R + + R + T + DV+SFG++L+E+ G+Q PW ++++ E+I
Sbjct: 195 TMLPIRWMPPESIMYR-----KFTTESDVWSFGVILWEIFTYGKQ-PW--FQLSNTEVIE 246
Query: 142 SVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMN 191
+TQG L RP C + M CW+ +P+ R +++ ++ L +
Sbjct: 247 CITQGRVLERPRV----CPKEVYDVMLGCWQREPQQRLNIKEIYKILHALG 293
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 23/167 (13%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDET---------GQE 83
+ GM +L D + H L + N L++S V +++DFGL F +D+T G +
Sbjct: 119 AAGMKYLADMNYV-HRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGK 175
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSV 143
+R + APE ++ T DV+S+G+V++EV+ G + MT++++I ++
Sbjct: 176 IPIR----WTAPEAIQYRKF---TSASDVWSYGIVMWEVMS-YGERPYWDMTNQDVINAI 227
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
Q L P +DC ++ M CW++D RP + + L +M
Sbjct: 228 EQDYRLPP---PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQERKLRRRKLY 92
GM +L+ ++ + H +L + NC + + ++I DFG+ ++ G + L R +
Sbjct: 137 GMAYLNANKFV-HRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--W 193
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITSVTQGSGL-R 150
+PE L+ T DV+SFG+VL+E+ + P+ L ++E+++ V +G L +
Sbjct: 194 MSPESLKDGVF---TTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDK 248
Query: 151 PDTSSLDCAPSIIACMRTCWEEDPELRPD-LRFVHHKLKEMNAGLKANIF 199
PD +C ++ MR CW+ +P++RP L + +EM G + F
Sbjct: 249 PD----NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 294
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 45 ISHGNLRSSNCLIDSR-----WVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLR 99
I H +LRS N + S ++ADFGL Q L + APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGL-----SQQSVHSVSGLLGNFQWMAPETIG 199
Query: 100 QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCA 159
T+K D YSF ++LY ++ +GP+ + I + + GLRP T DC
Sbjct: 200 AEE-ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-EGLRP-TIPEDCP 256
Query: 160 PSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
P + + CW DP+ RP ++ +L E+
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQE 83
I + + GM +L+ + + H NL + NC++ + ++I DFG+ ++ G +
Sbjct: 134 IQMAAEIADGMAYLNAKKFV-HRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITS 142
L R + APE L+ T D++SFG+VL+E+ + P+ L ++E+++
Sbjct: 193 GLLPVR--WMAPESLKDGVF---TTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQVLKF 245
Query: 143 VTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
V G L +PD +C + MR CW+ +P +RP + + LK+
Sbjct: 246 VMDGGYLDQPD----NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQE 83
I + + GM +L+ + + H NL + NC++ + ++I DFG+ ++ G +
Sbjct: 133 IQMAAEIADGMAYLNAKKFV-HRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITS 142
L R + APE L+ T D++SFG+VL+E+ + P+ L ++E+++
Sbjct: 192 GLLPVR--WMAPESLKDGVF---TTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQVLKF 244
Query: 143 VTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
V G L +PD +C + MR CW+ +P +RP + + LK+
Sbjct: 245 VMDGGYLDQPD----NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 21 IPIGSIS-VNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDE 79
IP+ +++ + S+GM +L + + H +L + N L+ +R +I+DFGL D
Sbjct: 107 IPVSNVAELLHQVSMGMKYLEEKNFV-HRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165
Query: 80 TGQERKLRRRKL-YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDE 137
R + L + APE + + + + + DV+S+G+ ++E + Q P+ +M
Sbjct: 166 YYTARSAGKWPLKWYAPECI---NFRKFSSRSDVWSYGVTMWEALSYGQKPYK--KMKGP 220
Query: 138 EIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKAN 197
E++ + QG + +C P + A M CW E RPD V +++ L +
Sbjct: 221 EVMAFIEQGKRME---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277
Query: 198 I 198
+
Sbjct: 278 V 278
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 82/190 (43%), Gaps = 29/190 (15%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +LH II H +L S NCL+ + +ADFGL DE Q
Sbjct: 111 VSFAKDIASGMAYLHSMNII-HRDLNSHNCLVRENKNVVVADFGLARLMV--DEKTQPEG 167
Query: 86 LR------RRKLYK--------APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGH 131
LR R+K Y APE++ +K DV+SFG+VL E+IGR
Sbjct: 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY---DEKVDVFSFGIVLCEIIGR------ 218
Query: 132 LRMTDEEIITSVTQGSGLRPDTSSL---DCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+ + + ++ G +R +C PS C + DPE RP + H L+
Sbjct: 219 VNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
Query: 189 EMNAGLKANI 198
+ L ++
Sbjct: 279 TLRMHLAGHL 288
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQE 83
I + + GM +L+ + + H +L + NC++ + ++I DFG+ ++ G +
Sbjct: 133 IQMAAEIADGMAYLNAKKFV-HRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGK 191
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITS 142
L R + APE L+ T D++SFG+VL+E+ + P+ L ++E+++
Sbjct: 192 GLLPVR--WMAPESLKDGVF---TTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQVLKF 244
Query: 143 VTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
V G L +PD +C + MR CW+ +P++RP + + LK+
Sbjct: 245 VMDGGYLDQPD----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L ++ +I H +L + NCL+ V++++DFG+ F D+ + + +
Sbjct: 115 GMAYLEEASVI-HRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWAS 172
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE+ R + K DV+SFG++++EV +G + ++ E++ ++ G L +P
Sbjct: 173 PEVFS---FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVEDISTGFRLYKPRL 228
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNA 192
+S + M CW+E PE RP + +L + A
Sbjct: 229 AS----THVYQIMNHCWKERPEDRPAFSRLLRQLAAIAA 263
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM +L+ + + H +L + NC++ + ++I DFG+ ET RK
Sbjct: 133 IQMAAEIADGMAYLNAKKFV-HRDLAARNCMVAHDFTVKIGDFGM---TRDIXETDXXRK 188
Query: 86 LRRRKL---YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIIT 141
+ L + APE L+ T D++SFG+VL+E+ + P+ L ++E+++
Sbjct: 189 GGKGLLPVRWMAPESLKDGVF---TTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQVLK 243
Query: 142 SVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
V G L +PD +C + MR CW+ +P++RP + + LK+
Sbjct: 244 FVMDGGYLDQPD----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM +L+ + + H +L + NC++ + ++I DFG+ ET RK
Sbjct: 130 IQMAAEIADGMAYLNAKKFV-HRDLAARNCMVAHDFTVKIGDFGM---TRDIXETDXXRK 185
Query: 86 LRRRKL---YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIIT 141
+ L + APE L+ T D++SFG+VL+E+ + P+ L ++E+++
Sbjct: 186 GGKGLLPVRWMAPESLKDGVF---TTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQVLK 240
Query: 142 SVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
V G L +PD +C + MR CW+ +P++RP + + LK+
Sbjct: 241 FVMDGGYLDQPD----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM ++ I H +LR++N L+ + +IADFGL + T +E
Sbjct: 112 IDFSAQIAEGMAYIERKNYI-HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA 170
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE + + T K +V+SFG++LYE++ G + T+ +++++++Q
Sbjct: 171 KFPIK-WTAPEAI---NFGCFTIKSNVWSFGILLYEIV-TYGKIPYPGRTNADVMSALSQ 225
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + P +C + M+ CW+E E RP ++ L +
Sbjct: 226 GYRM-PRME--NCPDELYDIMKMCWKEKAEERPTFDYLQSVLDD 266
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L ++ +I H +L + NCL+ V++++DFG+ F D+ + + +
Sbjct: 113 GMAYLEEACVI-HRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWAS 170
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE+ R + K DV+SFG++++EV +G + ++ E++ ++ G L +P
Sbjct: 171 PEVFS---FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVEDISTGFRLYKPRL 226
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+S + M CW+E PE RP + +L E+
Sbjct: 227 AS----THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L ++ +I H +L + NCL+ V++++DFG+ F D+ + + +
Sbjct: 115 GMAYLEEACVI-HRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWAS 172
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE+ R + K DV+SFG++++EV +G + ++ E++ ++ G L +P
Sbjct: 173 PEVFS---FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVEDISTGFRLYKPRL 228
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+S + M CW+E PE RP + +L E+
Sbjct: 229 AS----THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM +L+ + + H +L + NC++ + ++I DFG+ ET RK
Sbjct: 133 IQMAAEIADGMAYLNAKKFV-HRDLAARNCMVAHDFTVKIGDFGM---TRDIXETDXXRK 188
Query: 86 LRRRKL---YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIIT 141
+ L + APE L+ T D++SFG+VL+E+ + P+ L ++E+++
Sbjct: 189 GGKGLLPVRWMAPESLKDGVF---TTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQVLK 243
Query: 142 SVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
V G L +PD +C + MR CW+ +P +RP + + LK+
Sbjct: 244 FVMDGGYLDQPD----NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQE 83
I + + GM +L+ + + H +L + NC++ + ++I DFG+ ++ G +
Sbjct: 133 IQMAAEIADGMAYLNAKKFV-HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITS 142
L R + APE L+ T D++SFG+VL+E+ + P+ L ++E+++
Sbjct: 192 GLLPVR--WMAPESLKDGVF---TTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQVLKF 244
Query: 143 VTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
V G L +PD +C + MR CW+ +P++RP + + LK+
Sbjct: 245 VMDGGYLDQPD----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L ++ +I H +L + NCL+ V++++DFG+ F D+ + + +
Sbjct: 135 GMAYLEEACVI-HRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWAS 192
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE+ R + K DV+SFG++++EV +G + ++ E++ ++ G L +P
Sbjct: 193 PEVFS---FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVEDISTGFRLYKPRL 248
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+S + M CW+E PE RP + +L E+
Sbjct: 249 AS----THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L ++ +I H +L + NCL+ V++++DFG+ F D+ + + +
Sbjct: 118 GMAYLEEACVI-HRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWAS 175
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE+ R + K DV+SFG++++EV +G + ++ E++ ++ G L +P
Sbjct: 176 PEVFS---FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVEDISTGFRLYKPRL 231
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+S + M CW E PE RP + +L E+
Sbjct: 232 AS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 45 ISHGNLRSSNCLIDSR-----WVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLR 99
I H +LRS N + S ++ADFG Q L + APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 100 QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCA 159
T+K D YSF ++LY ++ +GP+ + I + + GLRP T DC
Sbjct: 200 AEE-ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-EGLRP-TIPEDCP 256
Query: 160 PSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
P + + CW DP+ RP ++ +L E+
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L ++ +I H +L + NCL+ V++++DFG+ F D+ + + +
Sbjct: 116 GMAYLEEACVI-HRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWAS 173
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDT 153
PE+ R + K DV+SFG++++EV +G + ++ E++ ++ G L +P
Sbjct: 174 PEVFS---FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVEDISTGFRLYKPRL 229
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+S + M CW E PE RP + +L E+
Sbjct: 230 AS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDETGQE 83
I + + GM +L+ + + H +L + NC++ + ++I DFG+ ++ G +
Sbjct: 132 IQMAAEIADGMAYLNAKKFV-HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG-RQGPWGHLRMTDEEIITS 142
L R + APE L+ T D++SFG+VL+E+ + P+ L ++E+++
Sbjct: 191 GLLPVR--WMAPESLKDGVF---TTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQVLKF 243
Query: 143 VTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
V G L +PD +C + MR CW+ +P++RP + + LK+
Sbjct: 244 VMDGGYLDQPD----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 21/166 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM + I H +LR++N L+ + V +IADFGL G +
Sbjct: 281 IDFSAQIAEGMAFIEQRNYI-HRDLRAANILVSASLVCKIADFGLA-------RVGAKFP 332
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
++ + APE + + T K DV+SFG++L E++ G + M++ E+I ++ +
Sbjct: 333 IK----WTAPEAI---NFGSFTIKSDVWSFGILLMEIV-TYGRIPYPGMSNPEVIRALER 384
Query: 146 GSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G + RP+ +C + M CW+ PE RP ++ L +
Sbjct: 385 GYRMPRPE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L + I H NL + N L+ +V +IADFGL GQ+ ++ R + A
Sbjct: 151 GMDYLSQKQFI-HRNLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMA 206
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
E L + T DV+S+G++L+E++ G + MT E+ + QG L
Sbjct: 207 IESL---NYSVYTTNSDVWSYGVLLWEIVSLGGT-PYCGMTCAELYEKLPQGYRLE---K 259
Query: 155 SLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
L+C + MR CW E P RP + L M
Sbjct: 260 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 45 ISHGNLRSSNCLIDSR-----WVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLR 99
I H +LRS N + S ++ADF L Q L + APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSL-----SQQSVHSVSGLLGNFQWMAPETIG 199
Query: 100 QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCA 159
T+K D YSF ++LY ++ +GP+ + I + + GLRP T DC
Sbjct: 200 AEE-ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-EGLRP-TIPEDCP 256
Query: 160 PSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
P + + CW DP+ RP ++ +L E+
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L + + H +L + N L++S V +++DFGL F E K+
Sbjct: 130 GMRYLAEMSYV-HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR 188
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI--GRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE + + T D +S+G+V++EV+ G + W M+++++I ++ Q L
Sbjct: 189 WTAPEAI---AFRKFTSASDAWSYGIVMWEVMSFGERPYWD---MSNQDVINAIEQDYRL 242
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
P DC S+ M CW++D RP V L +M
Sbjct: 243 PPPP---DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAF-----KAGQDETGQERKLRR 88
GM +L D + H +L + N L+DS V +++DFGL A TG + +R
Sbjct: 162 AGMRYLSDLGYV-HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR- 219
Query: 89 RKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSG 148
+ APE + + DV+SFG+V++EV+ G + MT+ ++I+SV +G
Sbjct: 220 ---WTAPEAI---AFRTFSSASDVWSFGVVMWEVLA-YGERPYWNMTNRDVISSVEEGYR 272
Query: 149 LRPDTSSLDCAPSIIACMRTCWEEDPELRP 178
L + + C ++ M CW +D RP
Sbjct: 273 L---PAPMGCPHALHQLMLDCWHKDRAQRP 299
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 18/147 (12%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRG 106
H +L + N L+ V +++DFGL + +TG KL + + APE LR+
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG---KLPVK--WTAPEALREKKF--- 176
Query: 107 TQKGDVYSFGLVLYEV--IGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSII 163
+ K DV+SFG++L+E+ GR P+ + + D ++ V +G + PD C P++
Sbjct: 177 STKSDVWSFGILLWEIYSFGRV-PYPRIPLKD--VVPRVEKGYKMDAPD----GCPPAVY 229
Query: 164 ACMRTCWEEDPELRPDLRFVHHKLKEM 190
M+ CW D +RP + +L+ +
Sbjct: 230 EVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAF-----KAGQDETGQERKLRR 88
GM +L D + H +L + N L+DS V +++DFGL A TG + +R
Sbjct: 162 AGMRYLSDLGYV-HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR- 219
Query: 89 RKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSG 148
+ APE + + DV+SFG+V++EV+ G + MT+ ++I+SV +G
Sbjct: 220 ---WTAPEAI---AFRTFSSASDVWSFGVVMWEVLA-YGERPYWNMTNRDVISSVEEGYR 272
Query: 149 LRPDTSSLDCAPSIIACMRTCWEEDPELRP 178
L + + C ++ M CW +D RP
Sbjct: 273 L---PAPMGCPHALHQLMLDCWHKDRAQRP 299
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N L++S V +++DFG+ + +D+ R K+
Sbjct: 143 GMKYLSDMSAV-HRDLAARNILVNSNLVCKVSDFGMS--RVLEDDPEAAYTTRGGKIPIR 199
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ APE + T DV+S+G+V++EV+ G + M+++++I ++ +G L P
Sbjct: 200 WTAPEAIAYRKF---TSASDVWSYGIVMWEVMS-YGERPYWDMSNQDVIKAIEEGYRLPP 255
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+DC ++ M CW+++ RP + + L ++
Sbjct: 256 ---PMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 18/148 (12%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRG 106
H +L + N L+ V +++DFGL + +TG KL + + APE LR+
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG---KLPVK--WTAPEALREKKF--- 191
Query: 107 TQKGDVYSFGLVLYEV--IGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSII 163
+ K DV+SFG++L+E+ GR P+ + + D ++ V +G + PD C P++
Sbjct: 192 STKSDVWSFGILLWEIYSFGRV-PYPRIPLKD--VVPRVEKGYKMDAPD----GCPPAVY 244
Query: 164 ACMRTCWEEDPELRPDLRFVHHKLKEMN 191
M+ CW D +RP + +L+ +
Sbjct: 245 EVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 117 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGA 175
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 176 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 230
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 231 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 18/147 (12%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRG 106
H +L + N L+ V +++DFGL + +TG KL + + APE LR+
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG---KLPVK--WTAPEALREAAF--- 182
Query: 107 TQKGDVYSFGLVLYEV--IGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSII 163
+ K DV+SFG++L+E+ GR P+ + + D ++ V +G + PD C P++
Sbjct: 183 STKSDVWSFGILLWEIYSFGRV-PYPRIPLKD--VVPRVEKGYKMDAPD----GCPPAVY 235
Query: 164 ACMRTCWEEDPELRPDLRFVHHKLKEM 190
M+ CW D +RP + +L+ +
Sbjct: 236 EVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 106 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 164
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 165 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 219
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 220 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 108 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 166
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 167 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 221
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 222 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 41 DSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDET---GQERKLRRRKLYKAPEL 97
+S+ H +L + NCL++ + V++++DFGL + +ET G + +R + PE+
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR----WSPPEV 192
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSL 156
L + K D+++FG++++E+ G + R T+ E + QG L RP +S
Sbjct: 193 LMYSKF---SSKSDIWAFGVLMWEIYSL-GKMPYERFTNSETAEHIAQGLRLYRPHLAS- 247
Query: 157 DCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKANIFDNM 202
+ M +CW E + RP + L +NI D M
Sbjct: 248 ---EKVYTIMYSCWHEKADERPTFKI-----------LLSNILDVM 279
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N L++S V +++DFG+ + +D+ R K+
Sbjct: 128 GMKYLSDMSYV-HRDLAARNILVNSNLVCKVSDFGMS--RVLEDDPEAAYTTRGGKIPIR 184
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ APE + T DV+S+G+V++EV+ G + M+++++I ++ +G L P
Sbjct: 185 WTAPEAIAYRKF---TSASDVWSYGIVMWEVMS-YGERPYWDMSNQDVIKAIEEGYRLPP 240
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+DC ++ M CW+++ RP + + L ++
Sbjct: 241 ---PMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL--- 91
GM +L D + H +L + N L++S V +++DFG+ + +D+ R K+
Sbjct: 122 GMKYLSDMSYV-HRDLAARNILVNSNLVCKVSDFGMS--RVLEDDPEAAYTTRGGKIPIR 178
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ APE + T DV+S+G+V++EV+ G + M+++++I ++ +G L P
Sbjct: 179 WTAPEAIAYRKF---TSASDVWSYGIVMWEVMS-YGERPYWDMSNQDVIKAIEEGYRLPP 234
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+DC ++ M CW+++ RP + + L ++
Sbjct: 235 ---PMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 41 DSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQ 100
+S+ H +L + NCL++ + V++++DFGL + DE R + + PE+L
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSRGSKFPVRWSPPEVLM- 179
Query: 101 PHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCA 159
+ + K D+++FG++++E+ G + R T+ E + QG L RP +S
Sbjct: 180 --YSKFSSKSDIWAFGVLMWEIYSL-GKMPYERFTNSETAEHIAQGLRLYRPHLAS---- 232
Query: 160 PSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKANIFDNM 202
+ M +CW E + RP + L +NI D M
Sbjct: 233 EKVYTIMYSCWHEKADERPTFKI-----------LLSNILDVM 264
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 117 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 176 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 230
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 231 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 117 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 176 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 230
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 231 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 117 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 176 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 230
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 231 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 117 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 176 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 230
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 231 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 117 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 176 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 230
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 231 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 117 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 176 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 230
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 231 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L + I H +L + N L+ +V +IADFGL GQ+ ++ R + A
Sbjct: 144 GMDYLSQKQFI-HRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMA 199
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
E L + T DV+S+G++L+E++ G + MT E+ + QG L
Sbjct: 200 IESL---NYSVYTTNSDVWSYGVLLWEIVSLGGT-PYCGMTCAELYEKLPQGYRLE---K 252
Query: 155 SLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
L+C + MR CW E P RP + L M
Sbjct: 253 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAF--KAGQDET-----GQERKLR 87
GM +L + + H +L + N L++S V +++DFGL F + D T G + +R
Sbjct: 128 GMRYLAEMSYV-HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR 186
Query: 88 RRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI--GRQGPWGHLRMTDEEIITSVTQ 145
+ APE + + T D +S+G+V++EV+ G + W M+++++I ++ Q
Sbjct: 187 ----WTAPEAI---AFRKFTSASDAWSYGIVMWEVMSFGERPYWD---MSNQDVINAIEQ 236
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
L P DC S+ M CW++D RP V L +M
Sbjct: 237 DYRLPPPP---DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 284 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGA 342
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 343 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 397
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 398 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L + I H +L + N L+ +V +IADFGL GQ+ ++ R + A
Sbjct: 154 GMDYLSQKQFI-HRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMA 209
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
E L + T DV+S+G++L+E++ G + MT E+ + QG L
Sbjct: 210 IESL---NYSVYTTNSDVWSYGVLLWEIVSLGGT-PYCGMTCAELYEKLPQGYRLE---K 262
Query: 155 SLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
L+C + MR CW E P RP + L M
Sbjct: 263 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ ++ + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 114 VDMSAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 172
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 173 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 227
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW ++PE RP ++ L++
Sbjct: 228 GYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 26 ISVNTTASV------GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDE 79
+ VN T + GM +LH I+ H +L+S N D+ V+ I DFGL +
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHAKGIL-HKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQA 184
Query: 80 TGQERKLRRRK---LYKAPELLRQ-------PHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
+E KLR + + APE++RQ LP ++ DV++ G + YE+ R+ P+
Sbjct: 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPF-SKHSDVFALGTIWYELHAREWPF 243
Query: 130 GHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRP 178
E II + G+G++P+ S + I + CW + E RP
Sbjct: 244 K--TQPAEAIIWQM--GTGMKPNLSQIGMGKEISDILLFCWAFEQEERP 288
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAF-----KAGQDETGQERKLR 87
+ GM +L + + H +L + N L++S V +++DFGL +A +G + +R
Sbjct: 157 AAGMKYLANMNYV-HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Query: 88 RRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGS 147
+ APE + T DV+SFG+V++EV+ G + +++ E++ ++ G
Sbjct: 216 ----WTAPEAISYRKF---TSASDVWSFGIVMWEVM-TYGERPYWELSNHEVMKAINDGF 267
Query: 148 GLRPDTSSLDCAPSIIACMRTCWEEDPELRP 178
L + +DC +I M CW+++ RP
Sbjct: 268 RL---PTPMDCPSAIYQLMMQCWQQERARRP 295
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAF-----KAGQDETGQERKLR 87
+ GM +L D + H +L + N L++S V +++DFGL +A TG + +R
Sbjct: 155 AAGMRYLADMGYV-HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 88 RRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGS 147
+ APE ++ T DV+S+G+V++EV+ G + M+++++I ++ +G
Sbjct: 214 ----WTAPEAIQYRKF---TSASDVWSYGIVMWEVMS-YGERPYWDMSNQDVIKAIEEGY 265
Query: 148 GLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
L + +DC + M CW+++ RP + L +M
Sbjct: 266 RL---PAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 107 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGA 165
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 166 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 220
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW ++PE RP ++ L++
Sbjct: 221 GYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ V+++ADFGL G T
Sbjct: 133 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGA 191
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 192 KFPIK-WTAPESLAYNTF---SIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYDLLE 245
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+G + +P+ C P + MR CW+ P RP H + M
Sbjct: 246 KGYRMEQPE----GCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ ++ + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 114 VDMSAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGA 172
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 173 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 227
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW ++PE RP ++ L++
Sbjct: 228 GYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 14/162 (8%)
Query: 32 ASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG--QDETGQERKLRRR 89
A+ GM +L +S+ H +L + NCL+ + VL+I+DFG+ +A +G R++ +
Sbjct: 222 AAAGMEYL-ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 90 KLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE L + R + + DV+SFG++L+E G + +++++ V +G L
Sbjct: 281 --WTAPEAL---NYGRYSSESDVWSFGILLWETFSL-GASPYPNLSNQQTREFVEKGGRL 334
Query: 150 R-PDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
P+ C ++ M CW +P RP ++ +L+ +
Sbjct: 335 PCPEL----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 32 ASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL 91
A+ G+ LH++ I H +++S+N L+D + +I+DFGL +T ++
Sbjct: 142 AANGINFLHENHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTA 200
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI-GRQGPWGH----LRMTDEEIITSVTQG 146
Y APE LR P K D+YSFG+VL E+I G H L + +E I +
Sbjct: 201 YMAPEALRGEITP----KSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT 256
Query: 147 SGLRPDTSSLDCAPSIIACMRT----CWEEDPELRPDLRFVHHKLKEMNA 192
D D + + M + C E RPD++ V L+EM A
Sbjct: 257 IEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 14/162 (8%)
Query: 32 ASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG--QDETGQERKLRRR 89
A+ GM +L +S+ H +L + NCL+ + VL+I+DFG+ +A +G R++ +
Sbjct: 222 AAAGMEYL-ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK 280
Query: 90 KLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE L + R + + DV+SFG++L+E G + +++++ V +G L
Sbjct: 281 --WTAPEAL---NYGRYSSESDVWSFGILLWETFSL-GASPYPNLSNQQTREFVEKGGRL 334
Query: 150 R-PDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
P+ C ++ M CW +P RP ++ +L+ +
Sbjct: 335 PCPEL----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 32 ASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL 91
A+ G+ LH++ I H +++S+N L+D + +I+DFGL +T ++
Sbjct: 142 AANGINFLHENHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA 200
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI-GRQGPWGH----LRMTDEEIITSVTQG 146
Y APE LR P K D+YSFG+VL E+I G H L + +E I +
Sbjct: 201 YMAPEALRGEITP----KSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT 256
Query: 147 SGLRPDTSSLDCAPSIIACMRT----CWEEDPELRPDLRFVHHKLKEMNA 192
D D + + M + C E RPD++ V L+EM A
Sbjct: 257 IEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 18/147 (12%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRG 106
H +L + N L+ V +++DFGL + +TG KL + + APE LR+
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG---KLPVK--WTAPEALREKKF--- 363
Query: 107 TQKGDVYSFGLVLYEV--IGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSII 163
+ K DV+SFG++L+E+ GR P+ + + D ++ V +G + PD C P++
Sbjct: 364 STKSDVWSFGILLWEIYSFGRV-PYPRIPLKD--VVPRVEKGYKMDAPD----GCPPAVY 416
Query: 164 ACMRTCWEEDPELRPDLRFVHHKLKEM 190
M+ CW D RP + +L+ +
Sbjct: 417 DVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 110 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 168
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 169 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 223
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW ++PE RP ++ L++
Sbjct: 224 GYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 283 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 342 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 396
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW ++PE RP ++ L++
Sbjct: 397 GYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 283 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 342 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 396
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW ++PE RP ++ L++
Sbjct: 397 GYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 283 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 342 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 396
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW ++PE RP ++ L++
Sbjct: 397 GYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 39/181 (21%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
IS + + GM L + I H +L + N L+ V++I DFGL
Sbjct: 202 ISYSFQVARGMEFLSSRKCI-HRDLAARNILLSENNVVKICDFGLA-------------- 246
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGRQG-PWG 130
R +YK P+ +R+ LP + K DV+S+G++L+E+ G P+
Sbjct: 247 ---RDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYP 303
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
++M DE+ + + +G +R P+ S+ P I M CW DP+ RP + KL +
Sbjct: 304 GVQM-DEDFCSRLREGMRMRAPEYST----PEIYQIMLDCWHRDPKERPRFAELVEKLGD 358
Query: 190 M 190
+
Sbjct: 359 L 359
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 41 DSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDET---GQERKLRRRKLYKAPEL 97
+S+ H +L + NCL++ + V++++DFGL + + T G + +R + PE+
Sbjct: 121 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEV 176
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSL 156
L + + K D+++FG++++E+ G + R T+ E + QG L RP +S
Sbjct: 177 LM---YSKFSSKSDIWAFGVLMWEIYSL-GKMPYERFTNSETAEHIAQGLRLYRPHLAS- 231
Query: 157 DCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKANIFDNM 202
+ M +CW E + RP + L +NI D M
Sbjct: 232 ---EKVYTIMYSCWHEKADERPTFKI-----------LLSNILDVM 263
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 41 DSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDET---GQERKLRRRKLYKAPEL 97
+S+ H +L + NCL++ + V++++DFGL + + T G + +R + PE+
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEV 177
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSL 156
L + + K D+++FG++++E+ G + R T+ E + QG L RP +S
Sbjct: 178 LM---YSKFSSKSDIWAFGVLMWEIYSL-GKMPYERFTNSETAEHIAQGLRLYRPHLAS- 232
Query: 157 DCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKANIFDNM 202
+ M +CW E + RP + L +NI D M
Sbjct: 233 ---EKVYTIMYSCWHEKADERPTFKI-----------LLSNILDVM 264
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 41 DSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDET---GQERKLRRRKLYKAPEL 97
+S+ H +L + NCL++ + V++++DFGL + + T G + +R + PE+
Sbjct: 117 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEV 172
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSL 156
L + + K D+++FG++++E+ G + R T+ E + QG L RP +S
Sbjct: 173 LM---YSKFSSKSDIWAFGVLMWEIYSL-GKMPYERFTNSETAEHIAQGLRLYRPHLAS- 227
Query: 157 DCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKANIFDNM 202
+ M +CW E + RP + L +NI D M
Sbjct: 228 ---EKVYTIMYSCWHEKADERPTFKI-----------LLSNILDVM 259
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM +L + + H +L + NC++D ++ +++ADFGL + + ++
Sbjct: 128 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 187 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 238
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 239 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 276
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM L + + H +L + NC++D ++ +++ADFGL F + ++
Sbjct: 134 IGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 192
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 193 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 244
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 245 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 282
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM L + + H +L + NC++D ++ +++ADFGL F + ++
Sbjct: 136 IGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 195 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 246
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 247 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 284
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H NL + NCL+ ++++ADFGL G T
Sbjct: 321 LYMATQISSAMEYLEKKNFI-HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 380 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 433
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 434 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 27/166 (16%)
Query: 41 DSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDET---GQERKLRRRKLYKAPEL 97
+S+ H +L + NCL++ + V++++DFGL + + T G + +R + PE+
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEV 192
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSL 156
L + K D+++FG++++E+ G + R T+ E + QG L RP +S
Sbjct: 193 LMYSKF---SSKSDIWAFGVLMWEIYSL-GKMPYERFTNSETAEHIAQGLRLYRPHLAS- 247
Query: 157 DCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKANIFDNM 202
+ M +CW E + RP + L +NI D M
Sbjct: 248 ---EKVYTIMYSCWHEKADERPTFKI-----------LLSNILDVM 279
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM +L + + H +L + NC++D ++ +++ADFGL + + ++
Sbjct: 155 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 214 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 265
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 266 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 303
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM +L + + H +L + NC++D ++ +++ADFGL + + ++
Sbjct: 136 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 195 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 246
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 247 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 284
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM +L + + H +L + NC++D ++ +++ADFGL + + ++
Sbjct: 131 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 189
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 190 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 241
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 242 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 279
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM +L + + H +L + NC++D ++ +++ADFGL + + ++
Sbjct: 133 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 191
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 192 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 243
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 244 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 281
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 41 DSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDET---GQERKLRRRKLYKAPEL 97
+S+ H +L + NCL++ + V++++DFGL + + T G + +R + PE+
Sbjct: 128 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEV 183
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSL 156
L + + K D+++FG++++E+ G + R T+ E + QG L RP +S
Sbjct: 184 LM---YSKFSSKSDIWAFGVLMWEIYSL-GKMPYERFTNSETAEHIAQGLRLYRPHLAS- 238
Query: 157 DCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGLKANIFDNM 202
+ M +CW E + RP + L +NI D M
Sbjct: 239 ---EKVYTIMYSCWHEKADERPTFKI-----------LLSNILDVM 270
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM L + + H +L + NC++D ++ +++ADFGL F + ++
Sbjct: 136 IGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 195 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 246
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 247 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM +L + + H +L + NC++D ++ +++ADFGL + + ++
Sbjct: 136 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 195 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 246
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 247 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 284
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +LR++N L+ V ++ADFGL + T ++
Sbjct: 366 VDMAAQIASGMAYVERMNYV-HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 425 KFPIK-WTAPEAAL---YGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 479
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW ++PE RP ++ L++
Sbjct: 480 GYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM L + + H +L + NC++D ++ +++ADFGL F + ++
Sbjct: 141 IGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 200 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 251
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 252 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM +L + + H +L + NC++D ++ +++ADFGL + + ++
Sbjct: 135 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 193
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 194 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 245
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 246 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 283
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM L + + H +L + NC++D ++ +++ADFGL F + ++
Sbjct: 137 IGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 196 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 247
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 248 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 285
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM +L + + H +L + NC++D ++ +++ADFGL + + ++
Sbjct: 134 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 192
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 193 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 244
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 245 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 282
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM L + + H +L + NC++D ++ +++ADFGL F + ++
Sbjct: 137 IGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 196 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 247
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 248 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 285
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H NL + NCL+ ++++ADFGL G T
Sbjct: 318 LYMATQISSAMEYLEKKNFI-HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 376
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 377 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 430
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 431 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H NL + NCL+ ++++ADFGL G T
Sbjct: 360 LYMATQISSAMEYLEKKNFI-HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 418
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 419 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 472
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 473 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + + GM ++ + H +L ++N L+ V ++ADFGL + T ++
Sbjct: 117 VDMAAQIASGMAYVERMNYV-HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE R T K DV+SFG++L E+ + G + M + E++ V +
Sbjct: 176 KFPIK-WTAPE---AALYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVER 230
Query: 146 GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + +C S+ M CW +DPE RP ++ L++
Sbjct: 231 GYRM---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM +L + + H +L + NC++D ++ +++ADFGL + + ++
Sbjct: 154 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 212
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 213 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 264
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 265 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 302
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL------HAFKAGQDE 79
I + GM L + + H +L + NC++D ++ +++ADFGL F + ++
Sbjct: 195 IGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
TG + ++ + A E L+ + T K DV+SFG++L+E++ R P + + +I
Sbjct: 254 TGAKLPVK----WMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDI 305
Query: 140 ITSVTQGSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ QG L+P+ C + M CW E+RP
Sbjct: 306 TVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 343
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 20/134 (14%)
Query: 19 FNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSR---WVLQIADFGLHAFKA 75
FN ++ + S G+ +LH I+ H +L+ N L++S+ +++I DFGL A
Sbjct: 133 FNEVDAAVIIKQVLS-GVTYLHKHNIV-HRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190
Query: 76 GQDETGQERKLRRR---KLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHL 132
Q +K++ R Y APE+LR+ + +K DV+S G++L+ ++ P+G
Sbjct: 191 NQ------KKMKERLGTAYYIAPEVLRKKY----DEKCDVWSIGVILFILLAGYPPFGG- 239
Query: 133 RMTDEEIITSVTQG 146
TD+EI+ V +G
Sbjct: 240 -QTDQEILRKVEKG 252
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
H+H ++ H +++ +N I + V+++ D GL F + + T L Y +PE
Sbjct: 151 HMHSRRVM-HRDIKPANVFITATGVVKLGDLGLGRFFSSK--TTAAHSLVGTPYYMSPER 207
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLD 157
+ H K D++S G +LYE+ Q P+ +M + + Q P S
Sbjct: 208 I---HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSDH 262
Query: 158 CAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNA 192
+ + + C DPE RPD+ +V+ K M+A
Sbjct: 263 YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 17 SPFNIPIGS-ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAF 73
+PFN+P+ + + + GM +L I H +L + NC++ + +ADFGL +
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSRNFI-HRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 74 KAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHL 132
G KL + L A E L T DV++FG+ ++E++ R Q P+ +
Sbjct: 189 SGDYYRQGCASKLPVKWL--ALESLADNLY---TVHSDVWAFGVTMWEIMTRGQTPYAGI 243
Query: 133 RMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ EI + G+ L+ +C + M CW DP+ RP + +L+ +
Sbjct: 244 E--NAEIYNYLIGGNRLKQPP---ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 119 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 178 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 231
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 232 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 119 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 178 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 231
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 232 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 14/170 (8%)
Query: 32 ASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL 91
A+ G+ LH++ I H +++S+N L+D + +I+DFGL + ++
Sbjct: 136 AANGINFLHENHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA 194
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI-GRQGPWGH----LRMTDEEIITSVTQG 146
Y APE LR P K D+YSFG+VL E+I G H L + +E I +
Sbjct: 195 YMAPEALRGEITP----KSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT 250
Query: 147 SGLRPDTSSLDCAPSIIACMRT----CWEEDPELRPDLRFVHHKLKEMNA 192
D D + + M + C E RPD++ V L+EM A
Sbjct: 251 IEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 300
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 119 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 178 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 231
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 232 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 114 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 173 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 226
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 227 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 114 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 173 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 226
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 227 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 112 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE L + + K DV++FG++L+E I G + + ++ + +
Sbjct: 171 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDPSQVYELLEK 225
Query: 146 GSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ RP+ C + MR CW+ +P RP +H + M
Sbjct: 226 DYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 112 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE L + + K DV++FG++L+E I G + + ++ + +
Sbjct: 171 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDPSQVYELLEK 225
Query: 146 GSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ RP+ C + MR CW+ +P RP +H + M
Sbjct: 226 DYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 115 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 174 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 227
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 228 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + GM +L + + H +L + NC++D ++ +++ADFGL A E
Sbjct: 135 IGFGLQVAKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEXXSVHN 192
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
KL L + T K DV+SFG++L+E++ R P + + +I + Q
Sbjct: 193 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITVYLLQ 251
Query: 146 GSG-LRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
G L+P+ C + M CW E+RP
Sbjct: 252 GRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF 283
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 118 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 176
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 177 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 230
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 231 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 18/141 (12%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSR---WVLQIADFGLHA-FKAGQDETGQERKLRRRK 90
G +LH I+ H +L+ N L++S+ +++I DFGL A F+ G G+ ++
Sbjct: 133 GTTYLHKHNIV-HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG----GKMKERLGTA 187
Query: 91 LYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQG--SG 148
Y APE+LR+ + +K DV+S G++LY ++ P+G TD+EI+ V +G S
Sbjct: 188 YYIAPEVLRKKY----DEKCDVWSCGVILYILLCGYPPFGG--QTDQEILKRVEKGKFSF 241
Query: 149 LRPD-TSSLDCAPSIIACMRT 168
PD T D A ++ M T
Sbjct: 242 DPPDWTQVSDEAKQLVKLMLT 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 119 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 178 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 231
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 232 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 127 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 185
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 186 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 239
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 240 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 116 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 175 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 228
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 229 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 18/141 (12%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSR---WVLQIADFGLHA-FKAGQDETGQERKLRRRK 90
G +LH I+ H +L+ N L++S+ +++I DFGL A F+ G G+ ++
Sbjct: 116 GTTYLHKHNIV-HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG----GKMKERLGTA 170
Query: 91 LYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQG--SG 148
Y APE+LR+ + +K DV+S G++LY ++ P+G TD+EI+ V +G S
Sbjct: 171 YYIAPEVLRKKY----DEKCDVWSCGVILYILLCGYPPFGG--QTDQEILKRVEKGKFSF 224
Query: 149 LRPD-TSSLDCAPSIIACMRT 168
PD T D A ++ M T
Sbjct: 225 DPPDWTQVSDEAKQLVKLMLT 245
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 114 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 173 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 226
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 227 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 119 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 178 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 231
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 232 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 116 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 175 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 228
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 229 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + A+ G+ +LH II H +++S N L+D +V +I DFG+ D+T
Sbjct: 142 LEICIGAARGLHYLHTRAII-HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
++ Y PE + L T+K DVYSFG+VL+EV+
Sbjct: 201 VKGTLGYIDPEYFIKGRL---TEKSDVYSFGVVLFEVL 235
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 114 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 173 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 226
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 227 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 114 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 173 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 226
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 227 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 114 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 173 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 226
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 227 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 35 GMIHLHDSEI--ISHGNLRSSNCLID--------SRWVLQIADFGLHAFKAGQDETGQER 84
GM +LHD I I H +L+SSN LI S +L+I DFGL E +
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL------AREWHRTT 170
Query: 85 KLRRRKLYK--APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDE-EIIT 141
K+ Y APE++R +G+ DV+S+G++L+E++ + P+ R D +
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGS---DVWSYGVLLWELLTGEVPF---RGIDGLAVAY 224
Query: 142 SVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKL 187
V P S+ C M CW DP RP + +L
Sbjct: 225 GVAMNKLALPIPST--CPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 115 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 173
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 174 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 227
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 228 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 112 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGA 170
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
K + APE L + + K DV++FG++L+E I G + + ++ + +
Sbjct: 171 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDPSQVYELLEK 225
Query: 146 GSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ RP+ C + MR CW+ +P RP +H + M
Sbjct: 226 DYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + T S M +L I H +L + NCL+ ++++ADFGL G T
Sbjct: 116 LYMATQISSAMEYLEKKNFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 174
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
K + APE L + + K DV++FG++L+E+ P+ + ++ ++ +
Sbjct: 175 KFPIK-WTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE 228
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+ + RP+ C + MR CW+ +P RP +H + M
Sbjct: 229 KDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 30/176 (17%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
GM +LH I H NL + N L+D+ +++I DFGL A G + +
Sbjct: 129 GMAYLHSQHYI-HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGP---------WGHLRMTDEEII 140
APE L++ + DV+SFG+ LYE++ Q P +MT +
Sbjct: 188 APECLKEYKFYYAS---DVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 244
Query: 141 TSVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPD-------LRFVHHKLK 188
+ +G L RPD C + M+ CWE + RP L+ VH K +
Sbjct: 245 ELLERGERLPRPDK----CPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 30/176 (17%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
GM +LH I H NL + N L+D+ +++I DFGL A G + +
Sbjct: 129 GMAYLHAQHYI-HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGP---------WGHLRMTDEEII 140
APE L++ + DV+SFG+ LYE++ Q P +MT +
Sbjct: 188 APECLKEYKFYYAS---DVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 244
Query: 141 TSVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPD-------LRFVHHKLK 188
+ +G L RPD C + M+ CWE + RP L+ VH K +
Sbjct: 245 ELLERGERLPRPDK----CPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 161 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 216
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++AG G L + + PE + T K D +S
Sbjct: 217 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 271
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 272 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 327
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 328 EDRPNFAIILERIE 341
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 138 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 193
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++AG G L + + PE + T K D +S
Sbjct: 194 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 248
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 249 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 304
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 305 EDRPNFAIILERIE 318
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 32 ASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL 91
A+ G+ LH++ I H +++S+N L+D + +I+DFGL + ++
Sbjct: 133 AANGINFLHENHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTA 191
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
Y APE LR P K D+YSFG+VL E+I
Sbjct: 192 YXAPEALRGEITP----KSDIYSFGVVLLEII 219
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 23/162 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
GM +LH I H L + N L+D+ +++I DFGL A G + +
Sbjct: 124 GMAYLHAQHYI-HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 182
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGPW-------GHL--RMTDEEII 140
APE L++ + DV+SFG+ LYE++ Q P GH +MT +
Sbjct: 183 APECLKECKFYYAS---DVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLT 239
Query: 141 TSVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ +G L RPD C I M+ CWE + RP +
Sbjct: 240 ELLERGERLPRPDR----CPCEIYHLMKNCWETEASFRPTFQ 277
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 30/176 (17%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
GM +LH I H +L + N L+D+ +++I DFGL A G + +
Sbjct: 146 GMAYLHAQHYI-HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY 204
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGP---------WGHLRMTDEEII 140
APE L++ + DV+SFG+ LYE++ Q P +MT +
Sbjct: 205 APECLKEYKFYYAS---DVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 261
Query: 141 TSVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPD-------LRFVHHKLK 188
+ +G L RPD C + M+ CWE + RP L+ VH K +
Sbjct: 262 ELLERGERLPRPDK----CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 160 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 219 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 274 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 307
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 23/162 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
GM +LH I H L + N L+D+ +++I DFGL A G + +
Sbjct: 123 GMAYLHAQHYI-HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 181
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGPW-------GHL--RMTDEEII 140
APE L++ + DV+SFG+ LYE++ Q P GH +MT +
Sbjct: 182 APECLKECKFYYAS---DVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLT 238
Query: 141 TSVTQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ +G L RPD C I M+ CWE + RP +
Sbjct: 239 ELLERGERLPRPDR----CPCEIYHLMKNCWETEASFRPTFQ 276
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 160 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 219 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 274 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 307
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 153 VSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++L+E+ G P+ + + EE+ +
Sbjct: 212 GRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLK 266
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D S +C + MR CW P RP +
Sbjct: 267 EGH--RMDKPS-NCTNELYMMMRDCWHAVPSQRPTFK 300
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ + A+ G+ +LH II H +++S N L+D +V +I DFG+ +T
Sbjct: 142 LEICIGAARGLHYLHTRAII-HRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
++ Y PE + L T+K DVYSFG+VL+EV+
Sbjct: 201 VKGTLGYIDPEYFIKGRL---TEKSDVYSFGVVLFEVL 235
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 18 PFNIPIGSISVNTTASVGMIHLHDSE--IISHGNLRSSNCL-IDSRWVLQIADFGLHAFK 74
P+ ++S S G+ +LH + + H +L+ N L + VL+I DFG
Sbjct: 97 PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG----- 151
Query: 75 AGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRM 134
D + + APE+ + ++K DV+S+G++L+EVI R+ P+ +
Sbjct: 152 TACDIQTHMTNNKGSAAWMAPEVFEGSNY---SEKCDVFSWGIILWEVITRRKPFDEIGG 208
Query: 135 TDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
I+ +V G+ RP + I + M CW +DP RP +
Sbjct: 209 PAFRIMWAVHNGT--RPPLIK-NLPKPIESLMTRCWSKDPSQRPSM 251
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 194 VSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++L+E+ G P+ + + EE+ +
Sbjct: 253 GRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLK 307
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D S +C + MR CW P RP +
Sbjct: 308 EGH--RMDKPS-NCTNELYMMMRDCWHAVPSQRPTFK 341
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 149 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 208 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 262
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 263 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 296
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 18 PFNIPIGSISVNTTASVGMIHLHDSE--IISHGNLRSSNCL-IDSRWVLQIADFGLHAFK 74
P+ ++S S G+ +LH + + H +L+ N L + VL+I DFG
Sbjct: 98 PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG----- 152
Query: 75 AGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRM 134
D + + APE+ + ++K DV+S+G++L+EVI R+ P+ +
Sbjct: 153 TACDIQTHMTNNKGSAAWMAPEVFEGSNY---SEKCDVFSWGIILWEVITRRKPFDEIGG 209
Query: 135 TDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
I+ +V G+ RP + I + M CW +DP RP +
Sbjct: 210 PAFRIMWAVHNGT--RPPLIK-NLPKPIESLMTRCWSKDPSQRPSME 253
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 147 VSCTYQLARGMEYLASQKCI-HRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 206 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 260
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 261 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 294
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 160 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 219 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 274 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 307
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 114 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSV 143
+ + APE + + + + K DV+SFG++++E Q P + M E+ +
Sbjct: 173 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 227
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 228 EKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 18 PFNIPIGSI-SVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG 76
P +IP+ ++ ++GM +L + + H +L + NC++ + +ADFGL
Sbjct: 141 PKHIPLQTLLKFMVDIALGMEYLSNRNFL-HRDLAARNCMLRDDMTVCVADFGLSKKIYS 199
Query: 77 QDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTD 136
D Q R + + A E L T K DV++FG+ ++E+ R G + + +
Sbjct: 200 GDYYRQGRIAKMPVKWIAIESLADRVY---TSKSDVWAFGVTMWEIATR-GMTPYPGVQN 255
Query: 137 EEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
E+ + G L+ P+ DC + M +CW DP RP + +L+++
Sbjct: 256 HEMYDYLLHGHRLKQPE----DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 160 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 219 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 274 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 307
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 160 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 219 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 274 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 307
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 19/118 (16%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVL---QIADFGLHAFKAGQDETGQERKLRRR-- 89
G+ +LH I+ H +++ N L++++ L +I DFGL +F ++ KLR R
Sbjct: 158 GICYLHKHNIV-HRDIKPENILLENKNSLLNIKIVDFGLSSF------FSKDYKLRDRLG 210
Query: 90 -KLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQG 146
Y APE+L++ + +K DV+S G+++Y ++ P+G D++II V +G
Sbjct: 211 TAYYIAPEVLKKKY----NEKCDVWSCGVIMYILLCGYPPFGG--QNDQDIIKKVEKG 262
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 152 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 211 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 265
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 266 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 299
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 160 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 219 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 274 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 307
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 160 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 219 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 274 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 307
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 206 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 265 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 319
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 320 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 353
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 130 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSV 143
+ + APE + + + + K DV+SFG++++E Q P+ ++ + E+ +
Sbjct: 189 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAML 243
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 244 EKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 130 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSV 143
+ + APE + + + + K DV+SFG++++E Q P+ ++ + E+ +
Sbjct: 189 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAML 243
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 244 EKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 114 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 172
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSV 143
+ + APE + + + + K DV+SFG++++E Q P + M E+ +
Sbjct: 173 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 227
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 228 EKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 146 VSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++L+E+ G P+ + + EE+ +
Sbjct: 205 GRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLK 259
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D S +C + MR CW P RP +
Sbjct: 260 EGH--RMDKPS-NCTNELYMMMRDCWHAVPSQRPTFK 293
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 108 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 166
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSV 143
+ + APE + + + + K DV+SFG++++E Q P + M E+ +
Sbjct: 167 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 221
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 222 EKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 263
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 120 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSV 143
+ + APE + + + + K DV+SFG++++E Q P + M E+ +
Sbjct: 179 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 233
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 234 EKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 196 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 239
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 240 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 297
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 298 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 341
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 128 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 186
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVT 144
+ + APE + + + + K DV+SFG++++E G + M E+ +
Sbjct: 187 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFS-YGQKPYRGMKGSEVTAMLE 242
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 243 KGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 283
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 110 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSV 143
+ + APE + + + + K DV+SFG++++E Q P + M E+ +
Sbjct: 169 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 223
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 224 EKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 160 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 219 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 274 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 307
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 145 VSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++L+E+ G P+ + + EE+ +
Sbjct: 204 GRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLK 258
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D S +C + MR CW P RP +
Sbjct: 259 EGH--RMDKPS-NCTNELYMMMRDCWHAVPSQRPTFK 292
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 153 VSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++L+E+ G P+ + + EE+ +
Sbjct: 212 GRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLK 266
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D S +C + MR CW P RP +
Sbjct: 267 EGH--RMDKPS-NCTNELYMMMRDCWHAVPSQRPTFK 300
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 142 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 185
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 186 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 243
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 244 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 287
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 142 VSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++L+E+ G P+ + + EE+ +
Sbjct: 201 GRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLK 255
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D S +C + MR CW P RP +
Sbjct: 256 EGH--RMDKPS-NCTNELYMMMRDCWHAVPSQRPTFK 289
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 153 VSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++L+E+ G P+ + + EE+ +
Sbjct: 212 GRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLK 266
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D S +C + MR CW P RP +
Sbjct: 267 EGH--RMDKPS-NCTNELYMMMRDCWHAVPSQRPTFK 300
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 142 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 185
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 186 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 243
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 244 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 287
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 201 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 244
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 245 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 302
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 303 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 346
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 203 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 246
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 247 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 304
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 305 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 348
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 138 VSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++L+E+ G P+ + + EE+ +
Sbjct: 197 GRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLK 251
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D S +C + MR CW P RP +
Sbjct: 252 EGH--RMDKPS-NCTNELYMMMRDCWHAVPSQRPTFK 285
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 472 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVT 144
+ + APE + + + + K DV+SFG++++E G + M E+ +
Sbjct: 531 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAMLE 586
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 587 KGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D +
Sbjct: 153 VSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++L+E+ G P+ + + EE+ +
Sbjct: 212 GRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLK 266
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D S +C + MR CW P RP +
Sbjct: 267 EGH--RMDKPS-NCTNELYMMMRDCWHAVPSQRPTFK 300
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 194 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 237
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 238 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 295
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 296 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 339
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+S + GM +L + I H +L + N L+ V++IADFGL D
Sbjct: 160 VSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + APE L T + DV+SFG++++E+ G P+ + + EE+ +
Sbjct: 219 GRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+G R D + +C + MR CW P RP +
Sbjct: 274 EGH--RMDKPA-NCTNELYMMMRDCWHAVPSQRPTFK 307
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQER 84
I + S+GM +L +S + H +L + N L+ ++ +I+DFGL A +A ++ +
Sbjct: 473 IELVHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 531
Query: 85 KLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSV 143
+ + APE + + + + K DV+SFG++++E Q P+ M E+ +
Sbjct: 532 HGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSEVTAML 586
Query: 144 TQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+G + C + M CW D E RP V +L+
Sbjct: 587 EKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 628
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 151 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 194
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 195 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 253 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 153 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 196
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 197 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 254
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 255 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 298
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 188 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 231
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 232 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 290 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 333
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 151 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGL--------------- 194
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 195 --ARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 253 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 296
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 135 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 190
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 245
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 246 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 301
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 302 EDRPNFAIILERIE 315
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
IS S GM +L + +++ H +L + N L+ ++I+DFGL +D + +
Sbjct: 153 ISFAWQISQGMQYLAEMKLV-HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + A E L H+ T + DV+SFG++L+E++ G P+ + E + +
Sbjct: 212 GRIPVKWMAIESLFD-HI--YTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPERLFNLLK 266
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G + RPD +C+ + M CW+++P+ RP + L++M
Sbjct: 267 TGHRMERPD----NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 135 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 190
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 245
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 246 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 301
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 302 EDRPNFAIILERIE 315
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 135 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 190
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 245
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 246 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 301
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 302 EDRPNFAIILERIE 315
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 121 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 176
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 177 PGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 231
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 232 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 287
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 288 EDRPNFAIILERIE 301
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 127 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 182
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 183 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 237
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 238 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 293
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 294 EDRPNFAIILERIE 307
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 147 ICYSFQVAKGMEFLASRKXI-HRDLAARNILLSEKNVVKICDFGL--------------- 190
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 191 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 248
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 249 GVKI-DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 292
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 121 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 176
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 231
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 232 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 287
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 288 EDRPNFAIILERIE 301
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 137 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 192
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 193 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 247
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 248 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 303
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 304 EDRPNFAIILERIE 317
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 147 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 202
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 203 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 257
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 258 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 313
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 314 EDRPNFAIILERIE 327
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
IS S GM +L + +++ H +L + N L+ ++I+DFGL +D + +
Sbjct: 153 ISFAWQISQGMQYLAEMKLV-HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQ 211
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + A E L H+ T + DV+SFG++L+E++ G P+ + E + +
Sbjct: 212 GRIPVKWMAIESLFD-HI--YTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPERLFNLLK 266
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G + RPD +C+ + M CW+++P+ RP + L++M
Sbjct: 267 TGHRMERPD----NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 117 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 176 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 232
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 233 KIDSAP--LALLHKILVENPSARITIPDIK 260
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 120 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 175
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 176 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 230
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 231 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 286
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 287 EDRPNFAIILERIE 300
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 120 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 175
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 176 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 230
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 231 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 286
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 287 EDRPNFAIILERIE 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 112 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 167
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 168 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 222
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 223 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 278
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 279 EDRPNFAIILERIE 292
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRRSVRETEAITPNPLSPFNIP-IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDS 59
++ +RET P P P ++ + + V + G +L ++ I H ++ + NCL+
Sbjct: 121 LKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTC 176
Query: 60 RW---VLQIADFGL--HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYS 114
V +I DFG+ ++A G L + + PE + T K D +S
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEAFMEGIF---TSKTDTWS 231
Query: 115 FGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDP 174
FG++L+E+ G + +++E++ VT G + P +C + M CW+ P
Sbjct: 232 FGVLLWEIFSL-GYMPYPSKSNQEVLEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQP 287
Query: 175 ELRPDLRFVHHKLK 188
E RP+ + +++
Sbjct: 288 EDRPNFAIILERIE 301
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
IS S GM +L + ++ H +L + N L+ ++I+DFGL +D + +
Sbjct: 153 ISFAWQISQGMQYLAEMSLV-HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVT 144
R + A E L H+ T + DV+SFG++L+E++ G P+ + E + +
Sbjct: 212 GRIPVKWMAIESLFD-HI--YTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPERLFNLLK 266
Query: 145 QGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
G + RPD +C+ + M CW+++P+ RP + L++M
Sbjct: 267 TGHRMERPD----NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL
Sbjct: 147 IXYSFQVAKGMEFLASRKXI-HRDLAARNILLSEKNVVKIXDFGL--------------- 190
Query: 86 LRRRKLYKAPELLRQ--PHLPRG------------TQKGDVYSFGLVLYEVIGR-QGPWG 130
R +YK P+ +R+ LP T + DV+SFG++L+E+ P+
Sbjct: 191 --ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 248
Query: 131 HLRMTDEEIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+++ DEE + +G+ +R PD ++ P + M CW +P RP
Sbjct: 249 GVKI-DEEFXRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 292
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL + ++
Sbjct: 142 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
R + APE + T + DV+SFG++L+E+ P+ +++ DEE +
Sbjct: 201 ARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLK 256
Query: 145 QGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+G+ +R PD ++ P + M CW +P RP
Sbjct: 257 EGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 287
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL + ++
Sbjct: 142 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
R + APE + T + DV+SFG++L+E+ P+ +++ DEE +
Sbjct: 201 ARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLK 256
Query: 145 QGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+G+ +R PD ++ P + M CW +P RP
Sbjct: 257 EGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 287
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL + ++
Sbjct: 151 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
R + APE + T + DV+SFG++L+E+ P+ +++ DEE +
Sbjct: 210 ARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLK 265
Query: 145 QGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+G+ +R PD ++ P + M CW +P RP
Sbjct: 266 EGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 296
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL + ++
Sbjct: 151 ICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
R + APE + T + DV+SFG++L+E+ P+ +++ DEE +
Sbjct: 210 ARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLK 265
Query: 145 QGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+G+ +R PD ++ P + M CW +P RP
Sbjct: 266 EGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 296
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 19 FNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQD 78
F++ + S+ + + +S+ H ++ + N L+ S +++ DFGL +
Sbjct: 106 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---- 161
Query: 79 ETGQERKLRRRKL---YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMT 135
E K + KL + APE + + R T DV+ FG+ ++E++ G +
Sbjct: 162 EDSTXXKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVK 217
Query: 136 DEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+ ++I + G L +C P++ + M CW DP RP RF K
Sbjct: 218 NNDVIGRIENGERL---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 263
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
I + + GM L + I H +L + N L+ + V++I DFGL + ++
Sbjct: 151 IXYSFQVAKGMEFLASRKXI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVT 144
R + APE + T + DV+SFG++L+E+ P+ +++ DEE +
Sbjct: 210 ARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLK 265
Query: 145 QGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRP 178
+G+ +R PD ++ P + M CW +P RP
Sbjct: 266 EGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRP 296
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 23 IGSIS-VNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDET 80
+G++S + GM +L I H +L + N L+ +R +++I DFGL A D
Sbjct: 120 LGTLSRYAVQVAEGMGYLESKRFI-HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 178
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEI 139
+ + + APE L+ + D + FG+ L+E+ Q PW + + +I
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPW--IGLNGSQI 233
Query: 140 ITSV-TQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRP 178
+ + +G L RP+ DC I M CW PE RP
Sbjct: 234 LHKIDKEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRP 270
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYK 93
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y
Sbjct: 115 AGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDT 153
APELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 174 APELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-W 230
Query: 154 SSLDCAPSIIACMRTCWEEDPELR---PDLRFVHHKLKEMNAGLK 195
+D AP +A + E+P R PD++ K + G K
Sbjct: 231 KKIDSAP--LALLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 23 IGSIS-VNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDET 80
+G++S + GM +L I H +L + N L+ +R +++I DFGL A D
Sbjct: 110 LGTLSRYAVQVAEGMGYLESKRFI-HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 168
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEI 139
+ + + APE L+ + D + FG+ L+E+ Q PW + + +I
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPW--IGLNGSQI 223
Query: 140 ITSV-TQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRP 178
+ + +G L RP+ DC I M CW PE RP
Sbjct: 224 LHKIDKEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 115 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 174 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 230
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 231 KIDSAP--LALLHKILVENPSARITIPDIK 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 117 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 176 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 232
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 233 KIDSAP--LALLHKILVENPSARITIPDIK 260
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 117 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 176 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 232
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 233 KIDSAP--LALLHKILVENPSARITIPDIK 260
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 117 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 176 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 232
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 233 KIDSAP--LALLHKILVENPSARITIPDIK 260
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 19 FNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQD 78
F++ + S+ + + +S+ H ++ + N L+ S +++ DFGL +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---- 541
Query: 79 ETGQERKLRRRKL---YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMT 135
E K + KL + APE + + R T DV+ FG+ ++E++ G +
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVK 597
Query: 136 DEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+ ++I + G L +C P++ + M CW DP RP RF K
Sbjct: 598 NNDVIGRIENGERL---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 643
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYK 93
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y
Sbjct: 116 AGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDT 153
APELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 APELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-W 231
Query: 154 SSLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KKIDSAP--LALLHKILVENPSARITIPDIK 260
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 23 IGSIS-VNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDET 80
+G++S + GM +L I H +L + N L+ +R +++I DFGL A D
Sbjct: 110 LGTLSRYAVQVAEGMGYLESKRFI-HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEI 139
+ + + APE L+ + D + FG+ L+E+ Q PW + + +I
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPW--IGLNGSQI 223
Query: 140 ITSV-TQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRP 178
+ + +G L RP+ DC I M CW PE RP
Sbjct: 224 LHKIDKEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 23 IGSIS-VNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDET 80
+G++S + GM +L I H +L + N L+ +R +++I DFGL A D
Sbjct: 114 LGTLSRYAVQVAEGMGYLESKRFI-HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEI 139
+ + + APE L+ + D + FG+ L+E+ Q PW + + +I
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPW--IGLNGSQI 227
Query: 140 ITSV-TQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRP 178
+ + +G L RP+ DC I M CW PE RP
Sbjct: 228 LHKIDKEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRP 264
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 23 IGSIS-VNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDET 80
+G++S + GM +L I H +L + N L+ +R +++I DFGL A D
Sbjct: 114 LGTLSRYAVQVAEGMGYLESKRFI-HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEI 139
+ + + APE L+ + D + FG+ L+E+ Q PW + + +I
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPW--IGLNGSQI 227
Query: 140 ITSV-TQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRP 178
+ + +G L RP+ DC I M CW PE RP
Sbjct: 228 LHKIDKEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRP 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 116 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 175 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 231
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 232 KIDSAP--LALLHKILVENPSARITIPDIK 259
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 23 IGSIS-VNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDET 80
+G++S + GM +L I H +L + N L+ +R +++I DFGL A D
Sbjct: 120 LGTLSRYAVQVAEGMGYLESKRFI-HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 178
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEI 139
+ + + APE L+ + D + FG+ L+E+ Q PW + + +I
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPW--IGLNGSQI 233
Query: 140 ITSV-TQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRP 178
+ + +G L RP+ DC I M CW PE RP
Sbjct: 234 LHKIDKEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRP 270
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 23 IGSIS-VNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDET 80
+G++S + GM +L I H +L + N L+ +R +++I DFGL A D
Sbjct: 110 LGTLSRYAVQVAEGMGYLESKRFI-HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEI 139
+ + + APE L+ + D + FG+ L+E+ Q PW + + +I
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPW--IGLNGSQI 223
Query: 140 ITSV-TQGSGL-RPDTSSLDCAPSIIACMRTCWEEDPELRP 178
+ + +G L RP+ DC I M CW PE RP
Sbjct: 224 LHKIDKEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
S + +L + H ++ + N L+ S +++ DFGL + E K + KL
Sbjct: 149 STALAYLESKRFV-HRDIAARNVLVSSNDCVKLGDFGLSRYM----EDSTYYKASKGKLP 203
Query: 92 --YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE + + R T DV+ FG+ ++E++ G + + ++I + G L
Sbjct: 204 IKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENGERL 259
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+C P++ + M CW DP RP RF K
Sbjct: 260 ---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 291
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 117 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 176 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 232
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 233 KIDSAP--LALLHKILVENPSARITIPDIK 260
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 117 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 176 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 232
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 233 KIDSAP--LALLHKILVENPSARITIPDIK 260
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+++LH I +H +++ N L+D R L+I+DFGL + K+ Y A
Sbjct: 117 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTS 154
PELL++ + DV+S G+VL ++ + PW + +E + + L P
Sbjct: 176 PELLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WK 232
Query: 155 SLDCAPSIIACMRTCWEEDPELR---PDLR 181
+D AP +A + E+P R PD++
Sbjct: 233 KIDSAP--LALLHKILVENPSARITIPDIK 260
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
S + +L + H ++ + N L+ S +++ DFGL + E K + KL
Sbjct: 126 STALAYLESKRFV-HRDIAARNVLVSSNDCVKLGDFGLSRYM----EDSTYYKASKGKLP 180
Query: 92 --YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE + + R T DV+ FG+ ++E++ G + + ++I + G L
Sbjct: 181 IKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENGERL 236
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+C P++ + M CW DP RP RF K
Sbjct: 237 ---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 268
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 27 SVNTTASV--GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHA-FKAGQDETGQE 83
++ TA + G+ HLH II + +L+ N L+D ++I+D GL KAGQ +T
Sbjct: 291 AIFYTAQIVSGLEHLHQRNII-YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--- 346
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW---GHLRMTDEEII 140
+ + APELL D ++ G+ LYE+I +GP+ G ++ ++E+
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSV---DYFALGVTLYEMIAARGPFRARGE-KVENKELK 402
Query: 141 TSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
V + + PD S P+ ++DPE R R
Sbjct: 403 QRVLEQAVTYPDKFS----PASKDFCEALLQKDPEKRLGFR 439
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 27 SVNTTASV--GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHA-FKAGQDETGQE 83
++ TA + G+ HLH II + +L+ N L+D ++I+D GL KAGQ +T
Sbjct: 291 AIFYTAQIVSGLEHLHQRNII-YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--- 346
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW---GHLRMTDEEII 140
+ + APELL D ++ G+ LYE+I +GP+ G ++ ++E+
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSV---DYFALGVTLYEMIAARGPFRARGE-KVENKELK 402
Query: 141 TSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
V + + PD S P+ ++DPE R R
Sbjct: 403 QRVLEQAVTYPDKFS----PASKDFCEALLQKDPEKRLGFR 439
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
S + +L + H ++ + N L+ S +++ DFGL + E K + KL
Sbjct: 121 STALAYLESKRFV-HRDIAARNVLVSSNDCVKLGDFGLSRYM----EDSTYYKASKGKLP 175
Query: 92 --YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE + + R T DV+ FG+ ++E++ G + + ++I + G L
Sbjct: 176 IKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENGERL 231
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+C P++ + M CW DP RP RF K
Sbjct: 232 ---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 263
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 27 SVNTTASV--GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHA-FKAGQDETGQE 83
++ TA + G+ HLH II + +L+ N L+D ++I+D GL KAGQ +T
Sbjct: 291 AIFYTAQIVSGLEHLHQRNII-YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--- 346
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW---GHLRMTDEEII 140
+ + APELL D ++ G+ LYE+I +GP+ G ++ ++E+
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSV---DYFALGVTLYEMIAARGPFRARGE-KVENKELK 402
Query: 141 TSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
V + + PD S P+ ++DPE R R
Sbjct: 403 QRVLEQAVTYPDKFS----PASKDFCEALLQKDPEKRLGFR 439
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
S + +L + H ++ + N L+ S +++ DFGL + E K + KL
Sbjct: 121 STALAYLESKRFV-HRDIAARNVLVSSNDCVKLGDFGLSRYM----EDSTYYKASKGKLP 175
Query: 92 --YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE + + R T DV+ FG+ ++E++ G + + ++I + G L
Sbjct: 176 IKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENGERL 231
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+C P++ + M CW DP RP RF K
Sbjct: 232 ---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 263
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
S + +L + H ++ + N L+ S +++ DFGL + E K + KL
Sbjct: 123 STALAYLESKRFV-HRDIAARNVLVSSNDCVKLGDFGLSRYM----EDSTYYKASKGKLP 177
Query: 92 --YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE + + R T DV+ FG+ ++E++ G + + ++I + G L
Sbjct: 178 IKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENGERL 233
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+C P++ + M CW DP RP RF K
Sbjct: 234 ---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 265
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
S + +L + H ++ + N L+ S +++ DFGL + E K + KL
Sbjct: 118 STALAYLESKRFV-HRDIAARNVLVSSNDCVKLGDFGLSRYM----EDSTYYKASKGKLP 172
Query: 92 --YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE + + R T DV+ FG+ ++E++ G + + ++I + G L
Sbjct: 173 IKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENGERL 228
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+C P++ + M CW DP RP RF K
Sbjct: 229 ---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 260
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
S + +L + H ++ + N L+ S +++ DFGL + E K + KL
Sbjct: 124 STALAYLESKRFV-HRDIAARNVLVSSNDCVKLGDFGLSRYM----EDSTYYKASKGKLP 178
Query: 92 --YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL 149
+ APE + + R T DV+ FG+ ++E++ G + + ++I + G L
Sbjct: 179 IKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENGERL 234
Query: 150 RPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+C P++ + M CW DP RP RF K
Sbjct: 235 ---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 266
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 24 GSISVNTTASV------GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ 77
G +SV+T + G+ H HD I+ H +++ N LIDS L+I DFG+ A +
Sbjct: 106 GPLSVDTAINFTNQILDGIKHAHDMRIV-HRDIKPQNILIDSNKTLKIFDFGI-AKALSE 163
Query: 78 DETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWG 130
Q + Y +PE + T D+YS G+VLYE++ + P+
Sbjct: 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECT---DIYSIGIVLYEMLVGEPPFN 213
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 22 PIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDE 79
P + + + GM +L ++ H +L + N L+ + ++I+D GL + A +
Sbjct: 144 PPDFVHLVAQIAAGMEYLSSHHVV-HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 202
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI--GRQGPWGHLRMTDE 137
L R + APE + + + D++S+G+VL+EV G Q G+ +++
Sbjct: 203 LLGNSLLPIR--WMAPEAIM---YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY---SNQ 254
Query: 138 EIITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+++ + L PD DC + A M CW E P RP + +H +L+
Sbjct: 255 DVVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 27 SVNTTASV--GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHA-FKAGQDETGQE 83
++ TA + G+ HLH II + +L+ N L+D ++I+D GL KAGQ +T
Sbjct: 291 AIFYTAQIVSGLEHLHQRNII-YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--- 346
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW---GHLRMTDEEII 140
+ + APELL D ++ G+ LYE+I +GP+ G ++ ++E+
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSV---DYFALGVTLYEMIAARGPFRARGE-KVENKELK 402
Query: 141 TSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
V + + PD S P+ ++DPE R R
Sbjct: 403 QRVLEQAVTYPDKFS----PASKDFCEALLQKDPEKRLGFR 439
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ--DET 80
+G I++ T ++ HL ++ I H +++ SN L+D +++ DFG+ +GQ D
Sbjct: 127 LGKITLATVKALN--HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI----SGQLVDSI 180
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQ-KGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
+ R R Y APE + +G + DV+S G+ LYE+ + P+ +++
Sbjct: 181 AKTRDAGCRP-YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL 239
Query: 140 ITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
V ++ + +PS I + C +D RP +
Sbjct: 240 TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYK 281
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L + ++ H NL + N L+ S +Q+ADFG+ D+ + + + A
Sbjct: 145 GMYYLEEHGMV-HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVTQGSGL-RPD 152
L H + T + DV+S+G+ ++E++ P+ LR+ E+ + +G L +P
Sbjct: 204 ---LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGERLAQPQ 258
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
++D + M CW D +RP + + ++ M
Sbjct: 259 ICTID----VYMVMVKCWMIDENIRPTFKELANEFTRM 292
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 22 PIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL--HAFKAGQDE 79
P + + + GM +L ++ H +L + N L+ + ++I+D GL + A +
Sbjct: 127 PPDFVHLVAQIAAGMEYLSSHHVV-HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 185
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
L R + APE + + + D++S+G+VL+EV G + +++++
Sbjct: 186 LLGNSLLPIR--WMAPEAIM---YGKFSIDSDIWSYGVVLWEVFS-YGLQPYCGYSNQDV 239
Query: 140 ITSVTQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
+ + L PD DC + A M CW E P RP + +H +L+
Sbjct: 240 VEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L + ++ H NL + N L+ S +Q+ADFG+ D+ + + + A
Sbjct: 127 GMYYLEEHGMV-HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVTQGSGL-RPD 152
L H + T + DV+S+G+ ++E++ P+ LR+ E+ + +G L +P
Sbjct: 186 ---LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGERLAQPQ 240
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
++D + M CW D +RP + + ++ M
Sbjct: 241 ICTID----VYMVMVKCWMIDENIRPTFKELANEFTRM 274
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 19 FNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQD 78
F++ + S+ + + +S+ H ++ + N L+ + +++ DFGL +
Sbjct: 106 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---- 161
Query: 79 ETGQERKLRRRKL---YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMT 135
E K + KL + APE + + R T DV+ FG+ ++E++ G +
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVK 217
Query: 136 DEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+ ++I + G L +C P++ + M CW DP RP RF K
Sbjct: 218 NNDVIGRIENGERL---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 263
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 30/186 (16%)
Query: 35 GMIHLHDSEI--------ISHGNLRSSNCLIDSRWVLQIADFGLHA-FKAGQDETGQERK 85
G+ HLH +EI I+H +L+S N L+ IAD GL F + +E
Sbjct: 146 GLCHLH-TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 86 LRR-RKLYKAPELLRQPHLPRGTQK---GDVYSFGLVLYEVIGR----------QGPWGH 131
R K Y PE+L + Q D+YSFGL+L+EV R Q P+
Sbjct: 205 TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264
Query: 132 LRMTD--EEIITSVTQGSGLRPDT----SSLDCAPSIIACMRTCWEEDPELRPDLRFVHH 185
L +D E + + LRP SS +C + M CW +P R V
Sbjct: 265 LVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324
Query: 186 KLKEMN 191
L +M+
Sbjct: 325 TLAKMS 330
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 19 FNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQD 78
F++ + S+ + + +S+ H ++ + N L+ + +++ DFGL +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---- 541
Query: 79 ETGQERKLRRRKL---YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMT 135
E K + KL + APE + + R T DV+ FG+ ++E++ G +
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEIL-MHGVKPFQGVK 597
Query: 136 DEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHK 186
+ ++I + G L +C P++ + M CW DP RP RF K
Sbjct: 598 NNDVIGRIENGERL---PMPPNCPPTLYSLMTKCWAYDPSRRP--RFTELK 643
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 35 GMIHLHDSE-IISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYK 93
GM LH E +I L S + +ID +I+ A + Q +
Sbjct: 123 GMAFLHTLEPLIPRHALNSRSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWV 175
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDT 153
APE L++ + D++SF ++L+E++ R+ P+ L ++ EI V GLRP T
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL--SNMEIGMKVAL-EGLRP-T 231
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
+P + M+ C EDP RP + L++M
Sbjct: 232 IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 22 PIGSISVNTTASVGMIHLH-------DSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFK 74
P ++ + +A+ G+ HLH I+H + +S N L+ S IAD GL
Sbjct: 104 PHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMH 163
Query: 75 A-GQD--ETGQERKLRRRKLYKAPELLRQ---PHLPRGTQKGDVYSFGLVLYEVIGRQGP 128
+ G D + G ++ ++ Y APE+L + + D+++FGLVL+E+ R
Sbjct: 164 SQGSDYLDIGNNPRVGTKR-YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIV 222
Query: 129 WGHLR---------------MTDEEIITSVTQGSGLRPDTSSLDCAPSIIA-CMRTCWEE 172
G + D + + V Q + P+ + D S +A MR CW
Sbjct: 223 NGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYP 282
Query: 173 DPELR 177
+P R
Sbjct: 283 NPSAR 287
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G ++V + + +L + + H +++ SN L+D R +++ DFG+ D+ +
Sbjct: 126 LGKMTVAIVKA--LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV--DDKAK 181
Query: 83 ERKLRRRKLYKAPELLR--QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEII 140
+R Y APE + P P + DV+S G+ L E+ Q P+ + + TD E++
Sbjct: 182 DRSA-GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-TDFEVL 239
Query: 141 TSVTQ 145
T V Q
Sbjct: 240 TKVLQ 244
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL-YKAPELLRQPHLPR 105
H ++ N L+ S +++ DFGL + +DE + + R + + +PE + + R
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIKWMSPESI---NFRR 186
Query: 106 GTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSIIA 164
T DV+ F + ++E++ G + ++++I + +G L +PD C P +
Sbjct: 187 FTTASDVWMFAVCMWEILSF-GKQPFFWLENKDVIGVLEKGDRLPKPDL----CPPVLYT 241
Query: 165 CMRTCWEEDPELRP 178
M CW+ DP RP
Sbjct: 242 LMTRCWDYDPSDRP 255
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL-YKAPELLRQPHLPR 105
H ++ N L+ S +++ DFGL + +DE + + R + + +PE + + R
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIKWMSPESI---NFRR 202
Query: 106 GTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSIIA 164
T DV+ F + ++E++ G + ++++I + +G L +PD C P +
Sbjct: 203 FTTASDVWMFAVCMWEILSF-GKQPFFWLENKDVIGVLEKGDRLPKPDL----CPPVLYT 257
Query: 165 CMRTCWEEDPELRP 178
M CW+ DP RP
Sbjct: 258 LMTRCWDYDPSDRP 271
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL-YKAPELLRQPHLPR 105
H ++ N L+ S +++ DFGL + +DE + + R + + +PE + + R
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIKWMSPESI---NFRR 190
Query: 106 GTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPDTSSLDCAPSIIA 164
T DV+ F + ++E++ G + ++++I + +G L +PD C P +
Sbjct: 191 FTTASDVWMFAVCMWEILSF-GKQPFFWLENKDVIGVLEKGDRLPKPDL----CPPVLYT 245
Query: 165 CMRTCWEEDPELRP 178
M CW+ DP RP
Sbjct: 246 LMTRCWDYDPSDRP 259
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L + + H +L + N L++S ++I DFGL E + R ++
Sbjct: 126 GMDYLGSRQYV-HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 184
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ--------------GPWGHLRMTDEEI 139
APE L Q + DV+SFG+ L+E++ GP H +MT +
Sbjct: 185 APECLMQSKFYIAS---DVWSFGVTLHELLTYCDSDSSPMALFLKMIGP-THGQMTVTRL 240
Query: 140 ITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELR 177
+ ++ +G L +C + MR CWE P R
Sbjct: 241 VNTLKEGKRL---PCPPNCPDEVYQLMRKCWEFQPSNR 275
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L + + H +L + N L++S ++I DFGL E + R ++
Sbjct: 138 GMDYLGSRQYV-HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 196
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGPWG---------HLRMTDEEII 140
APE L Q + DV+SFG+ L+E++ P H +MT ++
Sbjct: 197 APECLMQSKFYIAS---DVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253
Query: 141 TSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELR 177
++ +G L +C + MR CWE P R
Sbjct: 254 NTLKEGKRL---PCPPNCPDEVYQLMRKCWEFQPSNR 287
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 30/184 (16%)
Query: 23 IGSISVNTTASVGMIHLH-------DSEIISHGNLRSSNCLIDSRWVLQIADFGL---HA 72
+ + + + + G+ HLH I+H +L+S N L+ IAD GL H+
Sbjct: 105 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 164
Query: 73 FKAGQDETGQERKLRRRKLYKAPELLR---QPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
Q + G ++ ++ Y APE+L Q ++ D+++FGLVL+EV R
Sbjct: 165 QSTNQLDVGNNPRVGTKR-YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223
Query: 130 GHLR---------------MTDEEIITSVTQGSGLRPDTSSLD-CAPSIIACMRTCWEED 173
G + D + V Q P+ D S+ M+ CW ++
Sbjct: 224 GIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQN 283
Query: 174 PELR 177
P R
Sbjct: 284 PSAR 287
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 30/184 (16%)
Query: 23 IGSISVNTTASVGMIHLH-------DSEIISHGNLRSSNCLIDSRWVLQIADFGL---HA 72
+ + + + + G+ HLH I+H +L+S N L+ IAD GL H+
Sbjct: 105 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 164
Query: 73 FKAGQDETGQERKLRRRKLYKAPELLR---QPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
Q + G ++ ++ Y APE+L Q ++ D+++FGLVL+EV R
Sbjct: 165 QSTNQLDVGNNPRVGTKR-YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223
Query: 130 GHLR---------------MTDEEIITSVTQGSGLRPDTSSLD-CAPSIIACMRTCWEED 173
G + D + V Q P+ D S+ M+ CW ++
Sbjct: 224 GIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQN 283
Query: 174 PELR 177
P R
Sbjct: 284 PSAR 287
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 23 IGSISVNTTASVGMIHLH-------DSEIISHGNLRSSNCLIDSRWVLQIADFGL---HA 72
+ + + + + G+ HLH I+H +L+S N L+ IAD GL H+
Sbjct: 134 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 193
Query: 73 FKAGQDETGQERKLRRRKLYKAPELLR---QPHLPRGTQKGDVYSFGLVLYEVIGR 125
Q + G ++ ++ Y APE+L Q ++ D+++FGLVL+EV R
Sbjct: 194 QSTNQLDVGNNPRVGTKR-YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H NL + N L+++ ++I DFGL E + ++ ++
Sbjct: 127 GMEYLGTKRYI-HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 186 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 242
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 243 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 281
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 28 VNTTASVGMIHLHDS---------EIISHGNLRSSNCLIDSRWVLQIADFGLH-AFKAGQ 77
+ T + G+ +LH+ ISH +++S N L+ + IADFGL F+AG+
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 78 DETGQERKLRRRKLYKAPELLRQP-HLPRGT-QKGDVYSFGLVLYEVIGR----QGPWG- 130
++ R+ Y APE+L + R + D+Y+ GLVL+E+ R GP
Sbjct: 186 SAGDTHGQVGTRR-YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244
Query: 131 -----------HLRMTD-EEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRP 178
H + D +E++ + LR + + CW+ D E R
Sbjct: 245 YMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARL 304
Query: 179 DLRFVHHKLKEMN 191
V ++ +M
Sbjct: 305 SAGCVGERITQMQ 317
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKA-GQDETGQERKLRRRKL-- 91
G+ +LH + I H ++++ N L+ +QIADFG+ AF A G D T K+R+ +
Sbjct: 133 GLEYLHKNGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT--RNKVRKTFVGT 189
Query: 92 --YKAPELLRQPHLPRGTQ-KGDVYSFGLVLYEVIGRQGPWGH------LRMTDEEIITS 142
+ APE++ Q RG K D++SFG+ E+ P+ L +T + S
Sbjct: 190 PCWMAPEVMEQ---VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 143 VTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRP 178
+ +G++ S + C ++DPE RP
Sbjct: 247 LE--TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 280
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 31/192 (16%)
Query: 16 LSPFNIPI-GSISVNTTASVGMIHLHDSEI-------ISHGNLRSSNCLIDSRWVLQIAD 67
L+ + + + G I + + + G+ HLH + I+H +L+S N L+ IAD
Sbjct: 93 LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 152
Query: 68 FGLHAFKAGQDETGQERKLRR--RKLYKAPELL----RQPHLPRGTQKGDVYSFGLVLYE 121
GL +T R K Y APE+L H ++ D+Y+ GLV +E
Sbjct: 153 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWE 211
Query: 122 VIGR----------QGPWGHLRMTDEEI--ITSVTQGSGLRPDT----SSLDCAPSIIAC 165
+ R Q P+ L +D + + V LRP+ S + +
Sbjct: 212 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI 271
Query: 166 MRTCWEEDPELR 177
MR CW + R
Sbjct: 272 MRECWYANGAAR 283
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 30/183 (16%)
Query: 24 GSISVNTTASVGMIHLHDSEI-------ISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG 76
G I + + + G+ HLH + I+H +L+S N L+ IAD GL
Sbjct: 140 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 199
Query: 77 QDETGQERKLRR--RKLYKAPELL----RQPHLPRGTQKGDVYSFGLVLYEVIGR----- 125
+T R K Y APE+L H ++ D+Y+ GLV +E+ R
Sbjct: 200 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEIARRCSIGG 258
Query: 126 -----QGPWGHLRMTDEEI--ITSVTQGSGLRPDT----SSLDCAPSIIACMRTCWEEDP 174
Q P+ L +D + + V LRP+ S + + MR CW +
Sbjct: 259 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 318
Query: 175 ELR 177
R
Sbjct: 319 AAR 321
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 31/192 (16%)
Query: 16 LSPFNIPI-GSISVNTTASVGMIHLHDSEI-------ISHGNLRSSNCLIDSRWVLQIAD 67
L+ + + + G I + + + G+ HLH + I+H +L+S N L+ IAD
Sbjct: 92 LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151
Query: 68 FGLHAFKAGQDETGQERKLRR--RKLYKAPELL----RQPHLPRGTQKGDVYSFGLVLYE 121
GL +T R K Y APE+L H ++ D+Y+ GLV +E
Sbjct: 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWE 210
Query: 122 VIGR----------QGPWGHLRMTDEEI--ITSVTQGSGLRPDT----SSLDCAPSIIAC 165
+ R Q P+ L +D + + V LRP+ S + +
Sbjct: 211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI 270
Query: 166 MRTCWEEDPELR 177
MR CW + R
Sbjct: 271 MRECWYANGAAR 282
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 31/192 (16%)
Query: 16 LSPFNIPI-GSISVNTTASVGMIHLHDSEI-------ISHGNLRSSNCLIDSRWVLQIAD 67
L+ + + + G I + + + G+ HLH + I+H +L+S N L+ IAD
Sbjct: 118 LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 177
Query: 68 FGLHAFKAGQDETGQERKLRR--RKLYKAPELL----RQPHLPRGTQKGDVYSFGLVLYE 121
GL +T R K Y APE+L H ++ D+Y+ GLV +E
Sbjct: 178 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWE 236
Query: 122 VIGR----------QGPWGHLRMTDEEI--ITSVTQGSGLRPDT----SSLDCAPSIIAC 165
+ R Q P+ L +D + + V LRP+ S + +
Sbjct: 237 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI 296
Query: 166 MRTCWEEDPELR 177
MR CW + R
Sbjct: 297 MRECWYANGAAR 308
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 31/192 (16%)
Query: 16 LSPFNIPI-GSISVNTTASVGMIHLHDSEI-------ISHGNLRSSNCLIDSRWVLQIAD 67
L+ + + + G I + + + G+ HLH + I+H +L+S N L+ IAD
Sbjct: 98 LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 157
Query: 68 FGLHAFKAGQDETGQERKLRR--RKLYKAPELL----RQPHLPRGTQKGDVYSFGLVLYE 121
GL +T R K Y APE+L H ++ D+Y+ GLV +E
Sbjct: 158 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWE 216
Query: 122 VIGR----------QGPWGHLRMTDEEI--ITSVTQGSGLRPDT----SSLDCAPSIIAC 165
+ R Q P+ L +D + + V LRP+ S + +
Sbjct: 217 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI 276
Query: 166 MRTCWEEDPELR 177
MR CW + R
Sbjct: 277 MRECWYANGAAR 288
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKA-GQDETGQERKLRRRKL-- 91
G+ +LH + I H ++++ N L+ +QIADFG+ AF A G D T K+R+ +
Sbjct: 128 GLEYLHKNGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT--RNKVRKTFVGT 184
Query: 92 --YKAPELLRQPHLPRGTQ-KGDVYSFGLVLYEVIGRQGPWGH------LRMTDEEIITS 142
+ APE++ Q RG K D++SFG+ E+ P+ L +T + S
Sbjct: 185 PCWMAPEVMEQ---VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 241
Query: 143 VTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRP 178
+ +G++ S + C ++DPE RP
Sbjct: 242 LE--TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 275
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 31/192 (16%)
Query: 16 LSPFNIPI-GSISVNTTASVGMIHLHDSEI-------ISHGNLRSSNCLIDSRWVLQIAD 67
L+ + + + G I + + + G+ HLH + I+H +L+S N L+ IAD
Sbjct: 95 LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 154
Query: 68 FGLHAFKAGQDETGQERKLRR--RKLYKAPELL----RQPHLPRGTQKGDVYSFGLVLYE 121
GL +T R K Y APE+L H ++ D+Y+ GLV +E
Sbjct: 155 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWE 213
Query: 122 VIGR----------QGPWGHLRMTDEEI--ITSVTQGSGLRPDT----SSLDCAPSIIAC 165
+ R Q P+ L +D + + V LRP+ S + +
Sbjct: 214 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI 273
Query: 166 MRTCWEEDPELR 177
MR CW + R
Sbjct: 274 MRECWYANGAAR 285
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 12 TPNPLSPFNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL- 70
T P++P +I V A + H + II H +++ +N LI + +++ DFG+
Sbjct: 109 TEGPMTPKR----AIEVIADACQALNFSHQNGII-HRDVKPANILISATNAVKVVDFGIA 163
Query: 71 HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGP-- 128
A + Q + Y +PE R + + DVYS G VLYEV+ + P
Sbjct: 164 RAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV---DARSDVYSLGCVLYEVLTGEPPFT 220
Query: 129 --------WGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ H+R E+ I + GL D ++ ++ ++ E+R DL
Sbjct: 221 GDSPVSVAYQHVR---EDPIPPSARHEGLSADLDAV-VLKALAKNPENRYQTAAEMRADL 276
Query: 181 RFVHH 185
VH+
Sbjct: 277 VRVHN 281
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 157 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 216 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 273 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 311
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 24/175 (13%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I + + GM +L I H +L + N L+++ ++I DFGL E +
Sbjct: 117 IKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 83 ERKLRRRKLY-KAPELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTD 136
++ ++ APE L + + DV+SFG+VLYE+ + P +RM
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 232
Query: 137 EE-----IITSVTQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ I+ + + G RPD C I M CW + RP R
Sbjct: 233 NDKQGQMIVFHLIELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 283
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 132 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 191 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 247
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 248 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 286
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 131 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 190 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 246
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 247 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 285
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 24/175 (13%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I + + GM +L I H +L + N L+++ ++I DFGL E +
Sbjct: 118 IKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 176
Query: 83 ERKLRRRKLY-KAPELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTD 136
++ ++ APE L + + DV+SFG+VLYE+ + P +RM
Sbjct: 177 VKEPGESPIFWYAPESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 233
Query: 137 EE-----IITSVTQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ I+ + + G RPD C I M CW + RP R
Sbjct: 234 NDKQGQMIVFHLIELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 284
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 129 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 188 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 245 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 283
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 126 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 185 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 242 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 280
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 125 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 184 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 240
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 241 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 279
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ
Sbjct: 116 LGKVSIAVLR--GLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSM 169
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEV-IGR 125
+ Y APE L+ H + + D++S GL L E+ +GR
Sbjct: 170 ANSFVGTRSYMAPERLQGTHY---SVQSDIWSMGLSLVELAVGR 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 126 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 185 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 242 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 280
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 133 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 192 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 248
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 249 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 287
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 129 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 188 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 245 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 283
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 144 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 203 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 260 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 298
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 144 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 203 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 260 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 298
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 24/175 (13%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
I + + GM +L I H +L + N L+++ ++I DFGL E +
Sbjct: 112 IKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 170
Query: 83 ERKLRRRKLY-KAPELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTD 136
++ ++ APE L + + DV+SFG+VLYE+ + P +RM
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 227
Query: 137 EE-----IITSVTQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ I+ + + G RPD C I M CW + RP R
Sbjct: 228 NDKQGQMIVFHLIELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 278
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ--DET 80
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ DE
Sbjct: 109 LGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDEM 162
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEV-IGR 125
E R Y +PE L+ H + + D++S GL L E+ +GR
Sbjct: 163 ANEFVGTRS--YMSPERLQGTHY---SVQSDIWSMGLSLVEMAVGR 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ
Sbjct: 168 LGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSM 221
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEV-IGR 125
+ Y +PE L+ H + + D++S GL L E+ +GR
Sbjct: 222 ANSFVGTRSYMSPERLQGTHY---SVQSDIWSMGLSLVEMAVGR 262
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM++L + ++ H +L + N L+ S ++I DFGL G ++ + + A
Sbjct: 129 GMMYLEERRLV-HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 187
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVTQGSGL-RPD 152
E + H + T + DV+S+G+ ++E++ G P+ + EI + +G L +P
Sbjct: 188 LECI---HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI--PTREIPDLLEKGERLPQPP 242
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP +
Sbjct: 243 ICTID----VYMVMVKCWMIDADSRPKFK 267
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
S+G+ LH II + +L+ N ++DS ++IADFG+ K + R+ Y
Sbjct: 130 SIGLFFLHKRGII-YRDLKLDNVMLDSEGHIKIADFGM--CKEHMMDGVTTREFCGTPDY 186
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
APE++ + P G + D +++G++LYE++ Q P+
Sbjct: 187 IAPEIIA--YQPYG-KSVDWWAYGVLLYEMLAGQPPF 220
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ
Sbjct: 106 LGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSM 159
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEV-IGR 125
+ Y +PE L+ H + + D++S GL L E+ +GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHY---SVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ
Sbjct: 106 LGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSM 159
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEV-IGR 125
+ Y +PE L+ H + + D++S GL L E+ +GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHY---SVQSDIWSMGLSLVEMAVGR 200
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 12 TPNPLSPFNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL- 70
T P++P +I V A + H + II H +++ +N +I + +++ DFG+
Sbjct: 109 TEGPMTPKR----AIEVIADACQALNFSHQNGII-HRDVKPANIMISATNAVKVMDFGIA 163
Query: 71 HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGP-- 128
A + Q + Y +PE R + + DVYS G VLYEV+ + P
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV---DARSDVYSLGCVLYEVLTGEPPFT 220
Query: 129 --------WGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ H+R E+ I + GL D ++ ++ ++ E+R DL
Sbjct: 221 GDSPVSVAYQHVR---EDPIPPSARHEGLSADLDAV-VLKALAKNPENRYQTAAEMRADL 276
Query: 181 RFVHH 185
VH+
Sbjct: 277 VRVHN 281
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ
Sbjct: 106 LGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSM 159
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEV-IGR 125
+ Y +PE L+ H + + D++S GL L E+ +GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHY---SVQSDIWSMGLSLVEMAVGR 200
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 22 PIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDET 80
P +I V A + H + II H +++ +N +I + +++ DFG+ A +
Sbjct: 115 PKRAIEVIADACQALNFSHQNGII-HRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 81 GQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGP----------WG 130
Q + Y +PE R + + DVYS G VLYEV+ + P +
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSV---DARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQ 230
Query: 131 HLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHH 185
H+R E+ I + GL D ++ ++ ++ E+R DL VH+
Sbjct: 231 HVR---EDPIPPSARHEGLSADLDAV-VLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 12 TPNPLSPFNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL- 70
T P++P +I V A + H + II H +++ +N +I + +++ DFG+
Sbjct: 126 TEGPMTPKR----AIEVIADACQALNFSHQNGII-HRDVKPANIMISATNAVKVMDFGIA 180
Query: 71 HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGP-- 128
A + Q + Y +PE R + + DVYS G VLYEV+ + P
Sbjct: 181 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV---DARSDVYSLGCVLYEVLTGEPPFT 237
Query: 129 --------WGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ H+R E+ I + GL D ++ ++ ++ E+R DL
Sbjct: 238 GDSPVSVAYQHVR---EDPIPPSARHEGLSADLDAV-VLKALAKNPENRYQTAAEMRADL 293
Query: 181 RFVHH 185
VH+
Sbjct: 294 VRVHN 298
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 12 TPNPLSPFNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL- 70
T P++P +I V A + H + II H +++ +N +I + +++ DFG+
Sbjct: 109 TEGPMTPKR----AIEVIADACQALNFSHQNGII-HRDVKPANIMISATNAVKVMDFGIA 163
Query: 71 HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGP-- 128
A + Q + Y +PE R + + DVYS G VLYEV+ + P
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV---DARSDVYSLGCVLYEVLTGEPPFT 220
Query: 129 --------WGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ H+R E+ I + GL D ++ ++ ++ E+R DL
Sbjct: 221 GDSPVSVAYQHVR---EDPIPPSARHEGLSADLDAV-VLKALAKNPENRYQTAAEMRADL 276
Query: 181 RFVHH 185
VH+
Sbjct: 277 VRVHN 281
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Query: 13 PNPLSPFNIPIGS-ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLH 71
P P + P I++ + + +H H I H +++++N L+D + + DFGL
Sbjct: 122 PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181
Query: 72 AFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGH 131
+D +R + APE L + ++K DV+ +G++L E+I Q +
Sbjct: 182 KLMDYKD-XHVXXAVRGXIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITGQRAFDL 237
Query: 132 LRMTDEEIITSVTQGSGL 149
R+ +++ + + GL
Sbjct: 238 ARLANDDDVMLLDWVKGL 255
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ
Sbjct: 133 LGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSM 186
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEV-IGR 125
+ Y +PE L+ H + + D++S GL L E+ +GR
Sbjct: 187 ANSFVGTRSYMSPERLQGTHY---SVQSDIWSMGLSLVEMAVGR 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM++L + ++ H +L + N L+ S ++I DFGL G ++ + + A
Sbjct: 152 GMMYLEERRLV-HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 210
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEEIITSVTQGSGL-RPD 152
E + H + T + DV+S+G+ ++E++ G P+ + EI + +G L +P
Sbjct: 211 LECI---HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI--PTREIPDLLEKGERLPQPP 265
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP +
Sbjct: 266 ICTID----VYMVMVKCWMIDADSRPKFK 290
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L I H +L + N L+++ ++I DFGL E + ++ ++
Sbjct: 126 GMEYLGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI-----GRQGPWGHLRMTDEE-----IITSV 143
APE L + + DV+SFG+VLYE+ + P +RM + I+ +
Sbjct: 185 APESLTESKFSVAS---DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 144 TQ-----GSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
+ G RPD C I M CW + RP R
Sbjct: 242 IELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFR 280
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 12 TPNPLSPFNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL- 70
T P++P +I V A + H + II H +++ +N +I + +++ DFG+
Sbjct: 109 TEGPMTPKR----AIEVIADACQALNFSHQNGII-HRDVKPANIMISATNAVKVMDFGIA 163
Query: 71 HAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGP-- 128
A + Q + Y +PE R + + DVYS G VLYEV+ + P
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV---DARSDVYSLGCVLYEVLTGEPPFT 220
Query: 129 --------WGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDL 180
+ H+R E+ I + GL D ++ ++ ++ E+R DL
Sbjct: 221 GDSPVSVAYQHVR---EDPIPPSARHEGLSADLDAV-VLKALAKNPENRYQTAAEMRADL 276
Query: 181 RFVHH 185
VH+
Sbjct: 277 VRVHN 281
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ
Sbjct: 106 LGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSM 159
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEV-IGR 125
+ Y +PE L+ H + + D++S GL L E+ +GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHY---SVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ
Sbjct: 106 LGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSM 159
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEV-IGR 125
+ Y +PE L+ H + + D++S GL L E+ +GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHY---SVQSDIWSMGLSLVEMAVGR 200
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Query: 13 PNPLSPFNIPIGS-ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLH 71
P P + P I++ + + +H H I H +++++N L+D + + DFGL
Sbjct: 130 PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 189
Query: 72 AFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGH 131
+D +R + APE L + ++K DV+ +G++L E+I Q +
Sbjct: 190 KLMDYKD-XHVXXAVRGTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITGQRAFDL 245
Query: 132 LRMTDEEIITSVTQGSGL 149
R+ +++ + + GL
Sbjct: 246 ARLANDDDVMLLDWVKGL 263
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G +S+ G+ +L + I H +++ SN L++SR +++ DFG+ +GQ
Sbjct: 125 LGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSM 178
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWG 130
+ Y +PE L+ H + + D++S GL L E+ + P G
Sbjct: 179 ANSFVGTRSYMSPERLQGTHY---SVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ--DETGQERKLRRRKLY 92
G+ +LH + I H +++++N L+ + +++ADFG+ AGQ D + +
Sbjct: 132 GLDYLHSEKKI-HRDIKAANVLLSEQGDVKLADFGV----AGQLTDTQIKRNTFVGTPFW 186
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APE+++Q K D++S G+ E+ + P + M ++ + + + P
Sbjct: 187 MAPEVIQQSAY---DSKADIWSLGITAIELAKGEPP--NSDMHPMRVLFLIPKNN---PP 238
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR-FVHHKLKEMNA 192
T D S + C +DP RP + + HK N+
Sbjct: 239 TLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNS 279
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDE---TGQ 82
I T +V +H II H +L+ N L+ ++ +++ DFG + + + Q
Sbjct: 141 IFYQTCRAVQHMHRQKPPII-HRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ 199
Query: 83 ERKLRRRK-------LYKAPELLR-QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRM 134
R L + +Y+ PE++ + P G +K D+++ G +LY + RQ P+
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIG-EKQDIWALGCILYLLCFRQHPF----- 253
Query: 135 TDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEMNAGL 194
D + V + P + S+I R + +PE R + V H+L+E+ A
Sbjct: 254 EDGAKLRIVNGKYSIPPHDTQYTVFHSLI---RAMLQVNPEERLSIAEVVHQLQEIAAAR 310
Query: 195 KANIFDNMLAIMEK 208
N + ++E+
Sbjct: 311 NVNPKSPITELLEQ 324
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 31/180 (17%)
Query: 28 VNTTASVGMIHLHD----------SEIISHGNLRSSNCLIDSRWVLQIADFGLHA-FKAG 76
V T S G+ +LH+ I+H + +S N L+ S +ADFGL F+ G
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 77 QDETGQERKLRRRKLYKAPELLRQP-HLPRGT-QKGDVYSFGLVLYEVIGR----QGPWG 130
+ ++ R+ Y APE+L + R + D+Y+ GLVL+E++ R GP
Sbjct: 177 KPPGDTHGQVGTRR-YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
Query: 131 HLRMTDEEIITSVTQGSGLRPDTSSLDCAPSI-------------IACMRTCWEEDPELR 177
+ EE I L+ P+I + CW+ D E R
Sbjct: 236 EYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEAR 295
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 139 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 198 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 252
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + MR CW D + RP R
Sbjct: 253 ICTID----VYMIMRKCWMIDADSRPKFR 277
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 132 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 191 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 245
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + MR CW D + RP R
Sbjct: 246 ICTID----VYMIMRKCWMIDADSRPKFR 270
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 129 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 188 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 242
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + MR CW D + RP R
Sbjct: 243 ICTID----VYMIMRKCWMIDADSRPKFR 267
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
+ APE L++ + D +SF ++L+E++ R+ P+ L ++ EI V GLRP
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADL--SNXEIGXKVAL-EGLRP 230
Query: 152 DTSSLDCAPSIIACMRTCWEEDPELRP 178
T +P + + C EDP RP
Sbjct: 231 -TIPPGISPHVSKLXKICXNEDPAKRP 256
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ--DETGQERKLRRRKLY 92
G+ +LH + I H +++++N L+ +++ADFG+ AGQ D + +
Sbjct: 131 GLDYLHSEKKI-HRDIKAANVLLSEHGEVKLADFGV----AGQLTDTQIKRNXFVGTPFW 185
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APE+++Q K D++S G+ E+ + P H + +++ + + + P
Sbjct: 186 MAPEVIKQSAY---DSKADIWSLGITAIELARGEPP--HSELHPMKVLFLIPKNN---PP 237
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR-FVHHKLKEMNA 192
T + + + + C ++P RP + + HK NA
Sbjct: 238 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 278
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ--DETGQERKLRRRKLY 92
G+ +LH + I H +++++N L+ +++ADFG+ AGQ D + +
Sbjct: 116 GLDYLHSEKKI-HRDIKAANVLLSEHGEVKLADFGV----AGQLTDTQIKRNXFVGTPFW 170
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APE+++Q K D++S G+ E+ + P H + +++ + + + P
Sbjct: 171 MAPEVIKQSAY---DSKADIWSLGITAIELARGEPP--HSELHPMKVLFLIPKNN---PP 222
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR-FVHHKLKEMNA 192
T + + + + C ++P RP + + HK NA
Sbjct: 223 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 11/165 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLID-----SRWVLQIADFGL-HAFKAGQDE 79
I++ + G+ HLH I+ H +L+ N LI + I+DFGL G+
Sbjct: 121 ITLLQQTTSGLAHLHSLNIV-HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEE 138
+ + + + APE+L + T D++S G V Y VI P+G
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
Query: 139 IITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFV 183
I+ L P+ A +I M DP+ RP + V
Sbjct: 240 ILLGACSLDCLHPEKHEDVIARELIEKMIAM---DPQKRPSAKHV 281
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ--DETGQERKLRRRKLY 92
G+ +LH + I H +++++N L+ +++ADFG+ AGQ D + +
Sbjct: 116 GLDYLHSEKKI-HRDIKAANVLLSEHGEVKLADFGV----AGQLTDTQIKRNTFVGTPFW 170
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APE+++Q K D++S G+ E+ + P H + +++ + + + P
Sbjct: 171 MAPEVIKQSAY---DSKADIWSLGITAIELARGEPP--HSELHPMKVLFLIPKNN---PP 222
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR-FVHHKLKEMNA 192
T + + + + C ++P RP + + HK NA
Sbjct: 223 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ--DETGQERKLRRRKLY 92
G+ +LH + I H +++++N L+ +++ADFG+ AGQ D + +
Sbjct: 136 GLDYLHSEKKI-HRDIKAANVLLSEHGEVKLADFGV----AGQLTDTQIKRNTFVGTPFW 190
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APE+++Q K D++S G+ E+ + P H + +++ + + + P
Sbjct: 191 MAPEVIKQSAY---DSKADIWSLGITAIELARGEPP--HSELHPMKVLFLIPKNN---PP 242
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR-FVHHKLKEMNA 192
T + + + + C ++P RP + + HK NA
Sbjct: 243 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 283
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L + H +L + N L++S ++IADFGL + R+ + ++
Sbjct: 123 GMEYLGSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGPWGH-LRMTD-EEIITSVTQGS 147
APE L R + DV+SFG+VLYE+ P LRM E + ++ +
Sbjct: 182 APESLSDNIFSR---QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLL 238
Query: 148 GLRPDTSSLDCAPSIIA----CMRTCWEEDPELRPDLRFVHHKLKEMNAG 193
L + L P+ A M+ CW P+ RP + +L + +G
Sbjct: 239 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 288
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L + H +L + N L++S ++IADFGL + R+ + ++
Sbjct: 126 GMEYLGSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGPWGHL--RMTDEEIITSVTQGS 147
APE L R + DV+SFG+VLYE+ P M E + ++++
Sbjct: 185 APESLSDNIFSR---QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLL 241
Query: 148 GLRPDTSSLDCAPSIIA----CMRTCWEEDPELRPDLRFVHHKLKEMNAG 193
L + L P+ A M+ CW P+ RP + +L + +G
Sbjct: 242 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 291
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLID--SRWV-----------LQIADFGLHA 72
IS+ + G+ HLH +II H +L+ N L+ SR+ + I+DFGL
Sbjct: 136 ISLLRQIASGVAHLHSLKII-HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-- 192
Query: 73 FKAGQDETGQERKLRRRKL--------YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG 124
+ ++GQ R L ++APELL + R T+ D++S G V Y ++
Sbjct: 193 --CKKLDSGQXX--FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
Query: 125 R-QGPWGHLRMTDEEIITSVTQGSGLRP--DTSSLDCAPSIIACMRTCWEEDPELRPD-L 180
+ + P+G + II + ++ D S + A +I+ M + DP RP +
Sbjct: 249 KGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM---IDHDPLKRPTAM 305
Query: 181 RFVHHKL 187
+ + H L
Sbjct: 306 KVLRHPL 312
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLID--SRWV-----------LQIADFGLHA 72
IS+ + G+ HLH +II H +L+ N L+ SR+ + I+DFGL
Sbjct: 136 ISLLRQIASGVAHLHSLKII-HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-- 192
Query: 73 FKAGQDETGQERKLRRRKL--------YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG 124
+ ++GQ R L ++APELL + R T+ D++S G V Y ++
Sbjct: 193 --CKKLDSGQXX--FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
Query: 125 R-QGPWGHLRMTDEEIITSVTQGSGLRP--DTSSLDCAPSIIACMRTCWEEDPELRPD-L 180
+ + P+G + II + ++ D S + A +I+ M + DP RP +
Sbjct: 249 KGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM---IDHDPLKRPTAM 305
Query: 181 RFVHHKL 187
+ + H L
Sbjct: 306 KVLRHPL 312
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
++G+ L II + +L+ N ++DS ++IADFG+ K + + Y
Sbjct: 131 AIGLFFLQSKGII-YRDLKLDNVMLDSEGHIKIADFGMC--KENIWDGVTTKXFCGTPDY 187
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APE++ + P G + D ++FG++LYE++ Q P+ ++E+ S+ + + P
Sbjct: 188 IAPEII--AYQPYG-KSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVAYPK 242
Query: 153 TSS 155
+ S
Sbjct: 243 SMS 245
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
++ + HLH II + +L+ N L+D +++ DFGL K D + Y
Sbjct: 136 ALALDHLHSLGII-YRDLKPENILLDEEGHIKLTDFGLS--KESIDHEKKAYSFCGTVEY 192
Query: 93 KAPELLRQPHLPRG-TQKGDVYSFGLVLYEVIGRQGPW 129
APE++ + RG TQ D +SFG++++E++ P+
Sbjct: 193 MAPEVVNR----RGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
++G+ L II + +L+ N ++DS ++IADFG+ K + + Y
Sbjct: 452 AIGLFFLQSKGII-YRDLKLDNVMLDSEGHIKIADFGM--CKENIWDGVTTKXFCGTPDY 508
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APE++ + P G + D ++FG++LYE++ Q P+ ++E+ S+ + + P
Sbjct: 509 IAPEII--AYQPYG-KSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVAYPK 563
Query: 153 TSS 155
+ S
Sbjct: 564 SMS 566
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 19/102 (18%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSR---WVLQIADFGLH-AFKAGQDETGQERKLRRR- 89
G+ ++H I+ H +L+ N L++S+ ++I DFGL F+ Q K++ R
Sbjct: 133 GITYMHKHNIV-HRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-------QNTKMKDRI 184
Query: 90 --KLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
Y APE+LR + +K DV+S G++LY ++ P+
Sbjct: 185 GTAYYIAPEVLRGTY----DEKCDVWSAGVILYILLSGTPPF 222
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L + H +L + N L++S ++IADFGL + R+ + ++
Sbjct: 139 GMEYLGSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGPWGH-LRMTD-EEIITSVTQGS 147
APE L R + DV+SFG+VLYE+ P LRM E + ++++
Sbjct: 198 APESLSDNIFSR---QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254
Query: 148 GLRPDTSSLDCAPSIIA----CMRTCWEEDPELRPDLRFVHHKLKEMNAG 193
L + L P+ A M+ CW P+ RP + +L + +G
Sbjct: 255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYKAPELLRQPHL 103
I H +L++ N L+D+ ++IADFG + F G G+ Y APEL +
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG----GKLDAFCGAPPYAAPELFQGKKY 190
Query: 104 PRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDC 158
+ DV+S G++LY ++ P+ + +E+ V +G P S DC
Sbjct: 191 D--GPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKYRIPFYMSTDC 241
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
++G+ HLH II + +L+ N L+D +++ DFGL K D + Y
Sbjct: 140 ALGLDHLHSLGII-YRDLKPENILLDEEGHIKLTDFGLS--KEAIDHEKKAYSFCGTVEY 196
Query: 93 KAPELL-RQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
APE++ RQ H + D +S+G++++E++ P+
Sbjct: 197 MAPEVVNRQGH----SHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYKAPELLRQPHL 103
I H +L++ N L+D+ ++IADFG + F G G+ Y APEL +
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG----GKLDTFCGSPPYAAPELFQGKKY 187
Query: 104 PRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDC 158
+ DV+S G++LY ++ P+ + +E+ V +G P S DC
Sbjct: 188 D--GPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKYRIPFYMSTDC 238
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 27 SVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKL 86
S + + GM L I H +L + N L+ + +I DFGL +
Sbjct: 172 SFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 87 RRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVTQ 145
R + APE + T + DV+S+G+ L+E+ P+ + + D + + +
Sbjct: 231 RLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFYKMIKE 286
Query: 146 G-SGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
G L P+ + + + M+TCW+ DP RP +
Sbjct: 287 GFRMLSPEHAPAE----MYDIMKTCWDADPLKRPTFK 319
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 14/112 (12%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G I+V+ ++ HLH + H +++ SN LI++ +++ DFG+ + D+ +
Sbjct: 111 LGKIAVSIVKALE--HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV--DDVAK 166
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKG-----DVYSFGLVLYEVIGRQGPW 129
+ K Y APE + P QKG D++S G+ + E+ + P+
Sbjct: 167 DID-AGCKPYMAPERIN----PELNQKGYSVKSDIWSLGITMIELAILRFPY 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
++ + HLH II + +L+ N L+D +++ DFGL K D + Y
Sbjct: 136 ALALDHLHSLGII-YRDLKPENILLDEEGHIKLTDFGLS--KESIDHEKKAYSFCGTVEY 192
Query: 93 KAPELL-RQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
APE++ R+ H TQ D +SFG++++E++ P+
Sbjct: 193 MAPEVVNRRGH----TQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
++ + HLH II + +L+ N L+D +++ DFGL K D + Y
Sbjct: 137 ALALDHLHSLGII-YRDLKPENILLDEEGHIKLTDFGLS--KESIDHEKKAYSFCGTVEY 193
Query: 93 KAPELL-RQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
APE++ R+ H TQ D +SFG++++E++ P+
Sbjct: 194 MAPEVVNRRGH----TQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 147 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEII 140
L + ++ D+++ G ++Y+++ P+ R +E +I
Sbjct: 206 LTE---KSASKSSDLWALGCIIYQLVAGLPPF---RAGNEYLI 242
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY-K 93
GM +L + H +L + N L++S ++IADFGL + R+ + ++
Sbjct: 127 GMEYLGSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI----GRQGPWGH-LRMTD-EEIITSVTQGS 147
APE L R + DV+SFG+VLYE+ P LRM E + ++ +
Sbjct: 186 APESLSDNIFSR---QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLL 242
Query: 148 GLRPDTSSLDCAPSIIA----CMRTCWEEDPELRPDLRFVHHKLKEMNAG 193
L + L P+ A M+ CW P+ RP + +L + +G
Sbjct: 243 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 292
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
GM +L D ++ H +L + N L+ S ++I DFGL + E + K
Sbjct: 131 GMSYLEDVRLV-HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
+LR+ R T + DV+S+G+ ++E++ G + + EI + +G L +P
Sbjct: 190 LESILRR----RFTHQSDVWSYGVTVWELMTF-GAKPYDGIPAREIPDLLEKGERLPQPP 244
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKEM 190
++D + M CW D E RP R + + M
Sbjct: 245 ICTID----VYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 19/102 (18%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSR---WVLQIADFGLH-AFKAGQDETGQERKLRRR- 89
G+ ++H I+ H +L+ N L++S+ ++I DFGL F+ Q K++ R
Sbjct: 133 GITYMHKHNIV-HRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-------QNTKMKDRI 184
Query: 90 --KLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
Y APE+LR + +K DV+S G++LY ++ P+
Sbjct: 185 GTAYYIAPEVLRGTY----DEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 19/102 (18%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSR---WVLQIADFGLH-AFKAGQDETGQERKLRRR- 89
G+ ++H I+ H +L+ N L++S+ ++I DFGL F+ Q K++ R
Sbjct: 133 GITYMHKHNIV-HRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-------QNTKMKDRI 184
Query: 90 --KLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
Y APE+LR + +K DV+S G++LY ++ P+
Sbjct: 185 GTAYYIAPEVLRGTY----DEKCDVWSAGVILYILLSGTPPF 222
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFG-LHAFKAGQDETGQERKLRRRKLYK 93
GM +L D ++ H +L + N L+ + ++I DFG A + E E K
Sbjct: 131 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
+L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 190 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 244
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + MR CW D + RP R
Sbjct: 245 ICTID----VYMIMRKCWMIDADSRPKFR 269
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFG-LHAFKAGQDETGQERKLRRRKLYK 93
GM +L D ++ H +L + N L+ + ++I DFG A + E E K
Sbjct: 131 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
+L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 190 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 244
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + MR CW D + RP R
Sbjct: 245 ICTID----VYMIMRKCWMIDADSRPKFR 269
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYK 93
+G+ LH S+ I + +L+ N L+D ++IADFG+ K + + Y
Sbjct: 130 LGLQFLH-SKGIVYRDLKLDNILLDKDGHIKIADFGMC--KENMLGDAKTNEFCGTPDYI 186
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
APE+L + D +SFG++LYE++ Q P+ +EE+ S+ + P
Sbjct: 187 APEILLG---QKYNHSVDWWSFGVLLYEMLIGQSPFHG--QDEEELFHSIRMDNPFYP 239
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 27 SVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKL 86
S + + GM L I H +L + N L+ + +I DFGL +
Sbjct: 165 SFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 87 RRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVTQ 145
R + APE + T + DV+S+G+ L+E+ P+ + + D + + +
Sbjct: 224 RLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFYKMIKE 279
Query: 146 G-SGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
G L P+ + + + M+TCW+ DP RP +
Sbjct: 280 GFRMLSPEHAPAE----MYDIMKTCWDADPLKRPTFK 312
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 27 SVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKL 86
S + + GM L I H +L + N L+ + +I DFGL +
Sbjct: 167 SFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 87 RRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVTQ 145
R + APE + T + DV+S+G+ L+E+ P+ + + D + + +
Sbjct: 226 RLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFYKMIKE 281
Query: 146 G-SGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
G L P+ + + + M+TCW+ DP RP +
Sbjct: 282 GFRMLSPEHAPAE----MYDIMKTCWDADPLKRPTFK 314
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 148 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEII 140
L + + D+++ G ++Y+++ P+ R +E +I
Sbjct: 207 LTE---KSACKSSDLWALGCIIYQLVAGLPPF---RAGNEYLI 243
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 45/173 (26%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFG----------LHAFKAGQDETGQE 83
V + + I H +L++ N L+D+ ++IADFG L AF E
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSV 143
L + K Y PE+ DV+S G++LY ++ P+ + +E+ V
Sbjct: 183 --LFQGKKYDGPEV-------------DVWSLGVILYTLVSGSLPFDGQNL--KELRERV 225
Query: 144 TQGSGLRPDTSSLDCA----------PS----IIACMRTCW----EEDPELRP 178
+G P S DC PS + M+ W ED EL+P
Sbjct: 226 LRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 125 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 184 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 150 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEII 140
L + + D+++ G ++Y+++ P+ R +E +I
Sbjct: 209 LTE---KSACKSSDLWALGCIIYQLVAGLPPF---RAGNEYLI 245
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 27 SVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKL 86
S + + GM L I H +L + N L+ + +I DFGL +
Sbjct: 172 SFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 87 RRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVTQ 145
R + APE + T + DV+S+G+ L+E+ P+ + + D + + +
Sbjct: 231 RLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFYKMIKE 286
Query: 146 G-SGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
G L P+ + + + M+TCW+ DP RP +
Sbjct: 287 GFRMLSPEHAPAE----MYDIMKTCWDADPLKRPTFK 319
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 152 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 211 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFG----------LHAFKAGQDETGQE 83
V + + I H +L++ N L+D+ ++IADFG L AF E
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 84 RKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSV 143
L + K Y PE+ DV+S G++LY ++ P+ + +E+ V
Sbjct: 183 --LFQGKKYDGPEV-------------DVWSLGVILYTLVSGSLPFDGQNL--KELRERV 225
Query: 144 TQGSGLRPDTSSLDC 158
+G P S DC
Sbjct: 226 LRGKYRIPFYXSTDC 240
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 27 SVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKL 86
S + + GM L I H +L + N L+ + +I DFGL +
Sbjct: 149 SFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 87 RRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGR-QGPWGHLRMTDEEIITSVTQ 145
R + APE + T + DV+S+G+ L+E+ P+ + + D + + +
Sbjct: 208 RLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFYKMIKE 263
Query: 146 G-SGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
G L P+ + + + M+TCW+ DP RP +
Sbjct: 264 GFRMLSPEHAPAE----MYDIMKTCWDADPLKRPTFK 296
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 148 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 207 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 145 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 204 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 147 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 206 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 147 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 206 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 145 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 204 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 145 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 204 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 25 SISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQER 84
SI + +V +H ++ I H +L+ N L+D ++++DFG F + + R
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFG---FSCHLEPGEKLR 257
Query: 85 KLRRRKLYKAPELLR----QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLR 133
+L Y APE+L+ + H P ++ D+++ G++L+ ++ P+ H R
Sbjct: 258 ELCGTPGYLAPEILKCSMDETH-PGYGKEVDLWACGVILFTLLAGSPPFWHRR 309
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 129 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 188 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 242
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 243 ICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 122 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 181 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 147 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 206 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 145 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 204 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 147 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 206 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 129 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 188 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 242
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 243 ICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 136 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 195 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 249
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 250 ICTID----VYMIMVKCWMIDADSRPKFR 274
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 129 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 188 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 242
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 243 ICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 136 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 195 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 249
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 250 ICTID----VYMIMVKCWMIDADSRPKFR 274
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 123 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 182 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 236
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 237 ICTID----VYMIMVKCWMIDADSRPKFR 261
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 124 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 183 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 31/166 (18%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL---HAFKAGQDETGQERKLRRRK 90
V + + I H +L++ N L+D+ ++IADFG F DE
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPP----- 177
Query: 91 LYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLR 150
Y APEL + + DV+S G++LY ++ P+ + +E+ V +G
Sbjct: 178 -YAAPELFQGKKY--DGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKYRI 232
Query: 151 PDTSSLDCA----------PS----IIACMRTCW----EEDPELRP 178
P S DC PS + M+ W ED EL+P
Sbjct: 233 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYK 93
+G+ LH I+ + +L+ N L+D ++IADFG+ K + Y
Sbjct: 129 LGLQFLHSKGIV-YRDLKLDNILLDKDGHIKIADFGMC--KENMLGDAKTNXFCGTPDYI 185
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRP 151
APE+L + D +SFG++LYE++ Q P+ +EE+ S+ + P
Sbjct: 186 APEILLG---QKYNHSVDWWSFGVLLYEMLIGQSPFH--GQDEEELFHSIRMDNPFYP 238
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 130 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 189 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 243
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 244 ICTID----VYMIMVKCWMIDADSRPKFR 268
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 147 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 206 LTE---KSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 130 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 189 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 243
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 244 ICTID----VYMIMVKCWMIDADSRPKFR 268
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 132 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 191 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 245
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 246 ICTID----VYMIMVKCWMIDADSRPKFR 270
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 131 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 190 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 244
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 245 ICTID----VYMIMVKCWMIDADSRPKFR 269
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 129 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 188 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 242
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 243 ICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 129 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 188 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+ +LH I+ H +L+ +N L+D VL++ADFGL A G ++ R Y+A
Sbjct: 124 GLEYLHQHWIL-HRDLKPNNLLLDENGVLKLADFGL-AKSFGSPNRAYXHQVVTR-WYRA 180
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGR 125
PELL + G D+++ G +L E++ R
Sbjct: 181 PELLFGARM-YGVGV-DMWAVGCILAELLLR 209
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 131 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 190 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 244
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 245 ICTID----VYMIMVKCWMIDADSRPKFR 269
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 154 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 213 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 267
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 268 ICTID----VYMIMVKCWMIDADSRPKFR 292
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 163 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 222 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 276
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 277 ICTID----VYMIMVKCWMIDADSRPKFR 301
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 126 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 185 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 239
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 240 ICTID----VYMIMVKCWMIDADSRPKFR 264
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 135 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 194 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 248
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 249 ICTID----VYMIMVKCWMIDADSRPKFR 273
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 123 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 182 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 133 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 192 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 246
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 247 ICTID----VYMIMVKCWMIDADSRPKFR 271
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 132 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 191 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 245
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 246 ICTID----VYMIMVKCWMIDADSRPKFR 270
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 144 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 203 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 132 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 191 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 245
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 246 ICTID----VYMIMVKCWMIDADSRPKFR 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM +L D ++ H +L + N L+ + ++I DFGL +++ + + A
Sbjct: 136 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 95 PE-LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
E +L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 195 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 249
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 250 ICTID----VYMIMVKCWMIDADSRPKFR 274
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
G+ LH I+ + +L+ N L+D ++I+D GL A GQ K R +
Sbjct: 296 CCGLEDLHRERIV-YRDLKPENILLDDHGHIRISDLGL----AVHVPEGQTIKGRVGTVG 350
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
Y APE+++ R T D ++ G +LYE+I Q P+
Sbjct: 351 YMAPEVVKN---ERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL- 91
G+ LH I+ + +L+ N L+D ++I+D GL A GQ K R +
Sbjct: 296 CCGLEDLHRERIV-YRDLKPENILLDDHGHIRISDLGL----AVHVPEGQTIKGRVGTVG 350
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
Y APE+++ R T D ++ G +LYE+I Q P+
Sbjct: 351 YMAPEVVKN---ERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH II H +L+ N L++ +QI DFG + + + + Y +PEL
Sbjct: 144 YLHGKGII-HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L + + D+++ G ++Y+++ P+
Sbjct: 203 LTE---KSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G I+V+ ++ HLH + H +++ SN LI++ +++ DFG+ +
Sbjct: 155 LGKIAVSIVKALE--HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKG-----DVYSFGLVLYEVIGRQGPW 129
+ K Y APE + P QKG D++S G+ + E+ + P+
Sbjct: 213 DAGC---KPYMAPERIN----PELNQKGYSVKSDIWSLGITMIELAILRFPY 257
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ--- 82
I + +V +H S+ + H +L+ SN V+++ DFGL QDE Q
Sbjct: 169 IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGL-VTAMDQDEEEQTVL 224
Query: 83 --------ERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
KLY +PE Q H + K D++S GL+L+E++
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPE---QIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLY 92
V + + I H +L++ N L+D ++IADFG + F G + Y
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN----KLDTFCGSPPY 179
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APEL + + DV+S G++LY ++ P+ + +E+ V +G P
Sbjct: 180 AAPELFQGKKY--DGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKYRIPF 235
Query: 153 TSSLDC 158
S DC
Sbjct: 236 YMSTDC 241
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 27/164 (16%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLY 92
V + + I H +L++ N L+D+ ++IADFG + F G + Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN----KLDTFCGSPPY 178
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APEL + + DV+S G++LY ++ P+ + +E+ V +G P
Sbjct: 179 AAPELFQGKKY--DGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKYRIPF 234
Query: 153 TSSLDCA----------PS----IIACMRTCW----EEDPELRP 178
S DC PS + M+ W ED EL+P
Sbjct: 235 YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 27/164 (16%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLY 92
V + + I H +L++ N L+D+ ++IADFG + F G + Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN----KLDTFCGSPPY 178
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APEL + + DV+S G++LY ++ P+ + +E+ V +G P
Sbjct: 179 AAPELFQGKKY--DGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKYRIPF 234
Query: 153 TSSLDCA----------PS----IIACMRTCW----EEDPELRP 178
S DC PS + M+ W ED EL+P
Sbjct: 235 YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 27/164 (16%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLY 92
V + + I H +L++ N L+D+ ++IADFG + F G + Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN----KLDTFCGSPPY 178
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APEL + + DV+S G++LY ++ P+ + +E+ V +G P
Sbjct: 179 AAPELFQGKKY--DGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKYRIPF 234
Query: 153 TSSLDCA----------PS----IIACMRTCW----EEDPELRP 178
S DC PS + M+ W ED EL+P
Sbjct: 235 YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 27/164 (16%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLY 92
V + + I H +L++ N L+D+ ++IADFG + F G + Y
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN----KLDTFCGSPPY 171
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APEL + + DV+S G++LY ++ P+ + +E+ V +G P
Sbjct: 172 AAPELFQGKKY--DGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKYRIPF 227
Query: 153 TSSLDCA----------PS----IIACMRTCW----EEDPELRP 178
S DC PS + M+ W ED EL+P
Sbjct: 228 YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 271
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ--DETGQERKLRRRKLY 92
G+ +LH SE H +++++N L+ + +++ADFG+ AGQ D + +
Sbjct: 128 GLDYLH-SERKIHRDIKAANVLLSEQGDVKLADFGV----AGQLTDTQIKRNXFVGTPFW 182
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPD 152
APE+++Q K D++S G+ E+ + P L ++ + + S P
Sbjct: 183 MAPEVIKQSAY---DFKADIWSLGITAIELAKGEPPNSDLHPM--RVLFLIPKNS---PP 234
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR-FVHHKL 187
T + + C +DP RP + + HK
Sbjct: 235 TLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKL-Y 92
G+ ++H ++I+ H +++++N LI VL++ADFGL AF ++ R L Y
Sbjct: 137 GLYYIHRNKIL-HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 93 KAPELL 98
+ PELL
Sbjct: 196 RPPELL 201
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYK 93
+ + H+HD +I+ H +++S N + +Q+ DFG+ E R Y
Sbjct: 136 LALKHVHDRKIL-HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA--RACIGTPYYL 192
Query: 94 APELLR-QPHLPRGTQKGDVYSFGLVLYEV 122
+PE+ +P+ K D+++ G VLYE+
Sbjct: 193 SPEICENKPY----NNKSDIWALGCVLYEL 218
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDE------ 79
I + +V +H S+ + H +L+ SN V+++ DFGL QDE
Sbjct: 123 IFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGL-VTAMDQDEEEQTVL 178
Query: 80 ---------TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
TGQ KLY +PE Q H + K D++S GL+L+E++
Sbjct: 179 TPMPAYARHTGQVGT----KLYMSPE---QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKL-Y 92
G+ ++H ++I+ H +++++N LI VL++ADFGL AF ++ R L Y
Sbjct: 136 GLYYIHRNKIL-HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 93 KAPELL 98
+ PELL
Sbjct: 195 RPPELL 200
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 21 IPIGSISVNTTASVGMI-HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDE 79
IPI I + + ++H+ + I H +++ SN L+D ++++DFG + +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEI 139
G R + PE G K D++S G+ LY + P+ L+++ E+
Sbjct: 208 KGS----RGTYEFMPPEFFSNESSYNGA-KVDIWSLGICLYVMFYNVVPFS-LKISLVEL 261
Query: 140 ITSV 143
++
Sbjct: 262 FNNI 265
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKL-Y 92
G+ ++H ++I+ H +++++N LI VL++ADFGL AF ++ R L Y
Sbjct: 137 GLYYIHRNKIL-HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 93 KAPELL 98
+ PELL
Sbjct: 196 RPPELL 201
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKL-Y 92
G+ ++H ++I+ H +++++N LI VL++ADFGL AF ++ R L Y
Sbjct: 137 GLYYIHRNKIL-HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 93 KAPELL 98
+ PELL
Sbjct: 196 RPPELL 201
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 39 LHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELL 98
LH I+ H +L+ N L+D +++ DFG F D + R++ Y APE++
Sbjct: 140 LHKLNIV-HRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKLREVCGTPSYLAPEII 195
Query: 99 R---QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGH 131
+ P ++ D++S G+++Y ++ P+ H
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 39 LHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELL 98
LH I+ H +L+ N L+D +++ DFG F D + R++ Y APE++
Sbjct: 127 LHKLNIV-HRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKLREVCGTPSYLAPEII 182
Query: 99 R---QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGH 131
+ P ++ D++S G+++Y ++ P+ H
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 23 IGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQ 82
+G I+V+ + + HLH + H +++ SN LI++ ++ DFG+ + D+ +
Sbjct: 138 LGKIAVSIVKA--LEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV--DDVAK 193
Query: 83 ERKLRRRKLYKAPELLRQPHLPRGTQKG-----DVYSFGLVLYEVIGRQGPW 129
+ K Y APE + P QKG D++S G+ E+ + P+
Sbjct: 194 DID-AGCKPYXAPERIN----PELNQKGYSVKSDIWSLGITXIELAILRFPY 240
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLXGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH + + + +L+ N ++D ++I DFGL K G + + Y APE+
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMKTFCGTPEYLAPEV 320
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW---GHLRMTDEEIITSVTQGSGLRPDTS 154
L R D + G+V+YE++ + P+ H ++ + ++ + L P+
Sbjct: 321 LEDNDYGRAV---DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 377
Query: 155 SL 156
SL
Sbjct: 378 SL 379
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLAGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH + + + +L+ N ++D ++I DFGL K G + + Y APE+
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMKXFCGTPEYLAPEV 182
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW---GHLRMTDEEIITSVTQGSGLRPDTS 154
L R D + G+V+YE++ + P+ H ++ + ++ + L P+
Sbjct: 183 LEDNDYGRAV---DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 239
Query: 155 SL 156
SL
Sbjct: 240 SL 241
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH + + + +L+ N ++D ++I DFGL K G + + Y APE+
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMKXFCGTPEYLAPEV 181
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW---GHLRMTDEEIITSVTQGSGLRPDTS 154
L R D + G+V+YE++ + P+ H ++ + ++ + L P+
Sbjct: 182 LEDNDYGRAV---DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 238
Query: 155 SL 156
SL
Sbjct: 239 SL 240
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH + + + +L+ N ++D ++I DFGL K G + + Y APE+
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMKTFCGTPEYLAPEV 323
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW---GHLRMTDEEIITSVTQGSGLRPDTS 154
L R D + G+V+YE++ + P+ H ++ + ++ + L P+
Sbjct: 324 LEDNDYGRAV---DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 380
Query: 155 SL 156
SL
Sbjct: 381 SL 382
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH + + + +L+ N ++D ++I DFGL K G + + Y APE+
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMKXFCGTPEYLAPEV 180
Query: 98 LRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW---GHLRMTDEEIITSVTQGSGLRPDTS 154
L R D + G+V+YE++ + P+ H ++ + ++ + L P+
Sbjct: 181 LEDNDYGRAV---DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 237
Query: 155 SL 156
SL
Sbjct: 238 SL 239
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 13 PNPLSPFNIPIGSISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHA 72
PNP++ F + + +LH +II + +L+ N L+D ++I DFG
Sbjct: 104 PNPVAKF--------YAAEVCLALEYLHSKDII-YRDLKPENILLDKNGHIKITDFGFAK 154
Query: 73 FKAGQDETGQERKLRRRKLYKAPELLR-QPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
+ D T L Y APE++ +P+ + D +SFG+++YE++ P+
Sbjct: 155 YVP--DVT---YXLCGTPDYIAPEVVSTKPY----NKSIDWWSFGILIYEMLAGYTPF 203
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +Q+ DFGL + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLMIDQQGYIQVTDFGL-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 39 LHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELL 98
LH I+ H +L+ N L+D +++ DFG F D + R + Y APE++
Sbjct: 140 LHKLNIV-HRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKLRSVCGTPSYLAPEII 195
Query: 99 R---QPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGH 131
+ P ++ D++S G+++Y ++ P+ H
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 32/182 (17%)
Query: 40 HDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQD--ETGQERKLRRRKL----YK 93
H ISH +L S N L+ + I+DFGL G G+E ++ Y
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM 195
Query: 94 APELLRQPHLPRGTQKG----DVYSFGLVLYEVIGR-----------------QGPWG-H 131
APE+L R + D+Y+ GL+ +E+ R Q G H
Sbjct: 196 APEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNH 255
Query: 132 LRMTDEEIITSVTQGSGLRPDT---SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLK 188
D +++ S + P+ +SL S+ + CW++D E R + ++
Sbjct: 256 PTFEDMQVLVSREKQRPKFPEAWKENSL-AVRSLKETIEDCWDQDAEARLTAQXAEERMA 314
Query: 189 EM 190
E+
Sbjct: 315 EL 316
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +++ADFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIKVADFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +++ADFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIKVADFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +++ADFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIKVADFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 149 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 202
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 203 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 149 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 202
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 203 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +++ADFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLLIDQQGYIKVADFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFG-LHAFKAGQDETGQERKLRRRKLYK 93
GM +L D ++ H +L + N L+ + ++I DFG A + E E K
Sbjct: 133 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
+L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 192 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 246
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 247 ICTID----VYMIMVKCWMIDADSRPKFR 271
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFG-LHAFKAGQDETGQERKLRRRKLYK 93
GM +L D ++ H +L + N L+ + ++I DFG A + E E K
Sbjct: 129 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
+L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 188 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 242
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 243 ICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 143 YLHSLDLI-YRDLKPENLLIDEQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 196
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 197 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 17/124 (13%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPWGHLRMTDE--EIITSVTQGSGLRPDTS 154
+ L +G K D ++ G+++YE+ P+ DE +I + G P
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF----FADEPIQIYEKIVSGKVRFPSHF 261
Query: 155 SLDC 158
S D
Sbjct: 262 SSDL 265
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFG-LHAFKAGQDETGQERKLRRRKLYK 93
GM +L D ++ H +L + N L+ + ++I DFG A + E E K
Sbjct: 131 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
+L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 190 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 244
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 245 ICTID----VYMIMVKCWMIDADSRPKFR 269
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 142 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWTLCGTPEYLAPEI 195
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 196 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 177 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 230
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 231 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFG-LHAFKAGQDETGQERKLRRRKLYK 93
GM +L D ++ H +L + N L+ + ++I DFG A + E E K
Sbjct: 136 GMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGL-RPD 152
+L + + T + DV+S+G+ ++E++ G + + EI + + +G L +P
Sbjct: 195 LESILHRIY----THQSDVWSYGVTVWELMTF-GSKPYDGIPASEISSILEKGERLPQPP 249
Query: 153 TSSLDCAPSIIACMRTCWEEDPELRPDLR 181
++D + M CW D + RP R
Sbjct: 250 ICTID----VYMIMVKCWMIDADSRPKFR 274
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWTLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 177 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 230
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 231 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 151 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 204
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 205 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UVJ|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1.
pdb|3UVJ|C Chain C, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1
Length = 225
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 330 RGDFVEPESFDSVTIYFSDIVGFTQLSAESTETGRVTTRDSRRT 373
+G V+ + F +VT+ FSDIVGFT + ++ + +T ++ T
Sbjct: 3 QGQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYT 46
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 46 SHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPR 105
+H +++ N L+ + + DFG+ + + T Q Y APE + H
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLT-QLGNTVGTLYYXAPERFSESH--- 211
Query: 106 GTQKGDVYSFGLVLYEVIGRQGPW--GHLRMTDEEIITSVTQGSGLRP 151
T + D+Y+ VLYE + P+ L + I ++ + S +RP
Sbjct: 212 ATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRP 259
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 42/154 (27%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQE---------- 83
VG+ ++H + I+ H +L+ +NCL++ +++ DFGL A E G
Sbjct: 167 VGVKYVHSAGIL-HRDLKPANCLVNQDCSVKVCDFGL-ARTVDYPENGNSQLPISPREDD 224
Query: 84 ---------RKLRRR-------KLYKAPEL-LRQPHLPRGTQKGDVYSFGLVLYEVIGRQ 126
+ L+R+ + Y+APEL L Q + T+ DV+S G + E+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENY---TEAIDVWSIGCIFAEL---- 277
Query: 127 GPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAP 160
L M E + +G L P +S +P
Sbjct: 278 -----LNMIKENVAYHADRGP-LFPGSSCFPLSP 305
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 23/111 (20%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQD-----------ETG 81
+G +H+S II H +L+ +NCL++ +++ DFGL + +D E G
Sbjct: 140 LGENFIHESGII-HRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 82 QERKLRRRKL--------YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG 124
K +++L Y+APEL+ T+ D++S G + E++
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQE--NYTKSIDIWSTGCIFAELLN 247
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLP 104
+ H +L+ +N +D + +++ DFGL ++ +E Y +PE Q +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--FVGTPYYMSPE---QMNRM 191
Query: 105 RGTQKGDVYSFGLVLYEVIGRQGPW 129
+K D++S G +LYE+ P+
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM L I H ++ + N L+ + V +I DFGL + R + A
Sbjct: 176 GMAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 234
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ-GPWGHLRMTDEEIITSVTQGSGLRPDT 153
PE + T + DV+S+G++L+E+ P+ + + + + V G +
Sbjct: 235 PESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPA 290
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
+ +I + M+ CW +P RP + + L+E
Sbjct: 291 FA---PKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G L Y APE+
Sbjct: 177 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGATWTLCGTPEYLAPEI 230
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 231 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
GM L I H ++ + N L+ + V +I DFGL + R + A
Sbjct: 176 GMAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 234
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ-GPWGHLRMTDEEIITSVTQGSGLRPDT 153
PE + T + DV+S+G++L+E+ P+ + + + + V G +
Sbjct: 235 PESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPA 290
Query: 154 SSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
+ +I + M+ CW +P RP + + L+E
Sbjct: 291 FA---PKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 22/198 (11%)
Query: 6 RETEAITPNPLSPFNIPIGS-------------ISVNTTASVGMIHLHDSEIISHGNLRS 52
R+ EA+ L+P P G + ++ + GM L I H ++ +
Sbjct: 128 RKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI-HRDVAA 186
Query: 53 SNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRGTQKGDV 112
N L+ + V +I DFGL + R + APE + T + DV
Sbjct: 187 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY---TVQSDV 243
Query: 113 YSFGLVLYEVIGRQ-GPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWE 171
+S+G++L+E+ P+ + + + + V G + + +I + M+ CW
Sbjct: 244 WSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAFA---PKNIYSIMQACWA 299
Query: 172 EDPELRPDLRFVHHKLKE 189
+P RP + + L+E
Sbjct: 300 LEPTHRPTFQQICSFLQE 317
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ ++ + GM L I H ++ + N L+ + V +I DFGL +
Sbjct: 169 LHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ-GPWGHLRMTDEEIITSVT 144
R + APE + T + DV+S+G++L+E+ P+ + + + + V
Sbjct: 228 ARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVK 283
Query: 145 QGSGLRPDTSSLDCAP-SIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + + AP +I + M+ CW +P RP + + L+E
Sbjct: 284 DGYQM----AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 25/103 (24%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY----- 92
+LHD++II H +L++ N L +++ADFG+ A R ++RR +
Sbjct: 150 YLHDNKII-HRDLKAGNILFTLDGDIKLADFGVSA--------KNTRXIQRRDXFIGTPY 200
Query: 93 -KAPELLR------QPHLPRGTQKGDVYSFGLVLYEVIGRQGP 128
APE++ +P+ K DV+S G+ L E+ + P
Sbjct: 201 WMAPEVVMCETSKDRPY----DYKADVWSLGITLIEMAEIEPP 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLMIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ ++ + GM L I H ++ + N L+ + V +I DFGL +
Sbjct: 155 LHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ-GPWGHLRMTDEEIITSVT 144
R + APE + T + DV+S+G++L+E+ P+ + + + + V
Sbjct: 214 ARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVK 269
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + + +I + M+ CW +P RP + + L+E
Sbjct: 270 DGYQMAQPAFA---PKNIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+ +LH +II H +++ SN L+ ++IADFG+ G D + A
Sbjct: 149 GIEYLHYQKII-HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--VGTPAFMA 205
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRM 134
PE L + + DV++ G+ LY + Q P+ R+
Sbjct: 206 PESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 38 HLHDSEIISHGNLRSSNCL-IDSRW---VLQIADFGLHAFKAGQDETGQERKLRRRKLYK 93
+LH S+ + H +L+ SN L +D L+I DFG K + E G +
Sbjct: 136 YLH-SQGVVHRDLKPSNILYVDESGNPECLRICDFGFA--KQLRAENGLLMTPCYTANFV 192
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGH-LRMTDEEIITSVTQG 146
APE+L++ G D++S G++LY ++ P+ + T EEI+T + G
Sbjct: 193 APEVLKRQGYDEGC---DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSG 243
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H H I+ H +L+ N LI+S L++ADFGL AF E Y+
Sbjct: 131 GVAHCHQHRIL-HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL---WYR 186
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
AP++L + + D++S G + E+I
Sbjct: 187 APDVLMGSK--KYSTSVDIWSIGCIFAEMI 214
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H H I+ H +L+ N LI+S L++ADFGL AF E Y+
Sbjct: 131 GVAHCHQHRIL-HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL---WYR 186
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
AP++L + + D++S G + E+I
Sbjct: 187 APDVLMGSK--KYSTSVDIWSIGCIFAEMI 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 20/153 (13%)
Query: 32 ASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL 91
+ V H H ++ H +L+ N L+D+ +IADFGL + + R
Sbjct: 127 SGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL---RXSCGSPN 180
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIIT---SVTQGSG 148
Y APE++ L G + D++S G++LY ++ G L D+ + T + G
Sbjct: 181 YAAPEVI-SGRLYAGPEV-DIWSSGVILYALL-----CGTLPFDDDHVPTLFKKICDGIF 233
Query: 149 LRPDTSSLDCAPSIIACMRTCWEEDPELRPDLR 181
P + PS+I+ ++ + DP R ++
Sbjct: 234 YTPQYLN----PSVISLLKHMLQVDPMKRATIK 262
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 26 ISVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK 85
+ ++ + GM L I H ++ + N L+ + V +I DFGL +
Sbjct: 163 LHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 86 LRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ-GPWGHLRMTDEEIITSVT 144
R + APE + T + DV+S+G++L+E+ P+ + + + + V
Sbjct: 222 ARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVK 277
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRFVHHKLKE 189
G + + +I + M+ CW +P RP + + L+E
Sbjct: 278 DGYQMAQPAFA---PKNIYSIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRG 106
H +++ N L+D +++ADFG K +D T Q Y +PE+L+ +G
Sbjct: 198 HRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 107 TQ--KGDVYSFGLVLYEVIGRQGPW 129
+ D +S G+ +YE++ + P+
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 25/103 (24%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRK------L 91
+LHD++II H +L++ N L +++ADFG+ A R ++RR
Sbjct: 150 YLHDNKII-HRDLKAGNILFTLDGDIKLADFGVSA--------KNTRXIQRRDSFIGTPY 200
Query: 92 YKAPELLR------QPHLPRGTQKGDVYSFGLVLYEVIGRQGP 128
+ APE++ +P+ K DV+S G+ L E+ + P
Sbjct: 201 WMAPEVVMCETSKDRPY----DYKADVWSLGITLIEMAEIEPP 239
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLP 104
+ H +L+ +N +D + +++ DFGL + +T + Y +PE Q +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA--RILNHDTSFAKAFVGTPYYMSPE---QMNRM 191
Query: 105 RGTQKGDVYSFGLVLYEVIGRQGPW 129
+K D++S G +LYE+ P+
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 25/103 (24%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRK------L 91
+LHD++II H +L++ N L +++ADFG+ A R ++RR
Sbjct: 150 YLHDNKII-HRDLKAGNILFTLDGDIKLADFGVSA--------KNTRTIQRRDSFIGTPY 200
Query: 92 YKAPELLR------QPHLPRGTQKGDVYSFGLVLYEVIGRQGP 128
+ APE++ +P+ K DV+S G+ L E+ + P
Sbjct: 201 WMAPEVVMCETSKDRPY----DYKADVWSLGITLIEMAEIEPP 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +++ DFGL + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLMIDQQGYIKVTDFGL-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLP 104
+ H +L+ +N +D + +++ DFGL + +T + Y +PE Q +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA--RILNHDTSFAKTFVGTPYYMSPE---QMNRM 191
Query: 105 RGTQKGDVYSFGLVLYEVIGRQGPW 129
+K D++S G +LYE+ P+
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 38 HLHDSEIISHGNLRSSNCL-IDSRW---VLQIADFGLHAFKAGQDETGQERKLRRRKLYK 93
+LH S+ + H +L+ SN L +D L+I DFG K + E G +
Sbjct: 136 YLH-SQGVVHRDLKPSNILYVDESGNPECLRICDFGFA--KQLRAENGLLMTPCYTANFV 192
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGH-LRMTDEEIITSVTQG 146
APE+L++ G D++S G++LY ++ P+ + T EEI+T + G
Sbjct: 193 APEVLKRQGYDEGC---DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSG 243
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLR--QPHLP 104
H +++ N L+D +++ADFG K D T Q Y +PE+L+ + +
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 105 RGTQKGDVYSFGLVLYEVIGRQGPW 129
+ + D +S G+ +YE++ + P+
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 27 SVNTTASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKL 86
+ +++G +H S I + +L+ N L+DS+ + + DFGL K +
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGL--CKENIEHNSTTSTF 199
Query: 87 RRRKLYKAPELL-RQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQ 145
Y APE+L +QP+ + D + G VLYE++ P+ + R T E + +
Sbjct: 200 CGTPEYLAPEVLHKQPY----DRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEMYDNILNK 254
Query: 146 GSGLRPDTSS 155
L+P+ ++
Sbjct: 255 PLQLKPNITN 264
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++Y++ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLR--QPHLP 104
H +++ N L+D +++ADFG K D T Q Y +PE+L+ + +
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 105 RGTQKGDVYSFGLVLYEVIGRQGPW 129
+ + D +S G+ +YE++ + P+
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 39 LHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELL 98
LH +++I H N++S N L+ +++ DFG A E + + + APE++
Sbjct: 133 LHSNQVI-HRNIKSDNILLGMDGSVKLTDFGFCA--QITPEQSKRSTMVGTPYWMAPEVV 189
Query: 99 -RQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
R+ + P K D++S G++ E+I + P+
Sbjct: 190 TRKAYGP----KVDIWSLGIMAIEMIEGEPPY 217
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERK--LRRRKLY 92
GM++LH I+ H +L SN L+ ++IADFGL A Q + E+ L Y
Sbjct: 124 GMLYLHSHGIL-HRDLTLSNLLLTRNMNIKIADFGL----ATQLKMPHEKHYTLCGTPNY 178
Query: 93 KAPELL-RQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
+PE+ R H + DV+S G + Y ++ + P+
Sbjct: 179 ISPEIATRSAH----GLESDVWSLGCMFYTLLIGRPPF 212
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLY 92
+ + HLH II + +++ N L+DS + + DFGL F A DET + Y
Sbjct: 170 LALEHLHKLGII-YRDIKLENILLDSNGHVVLTDFGLSKEFVA--DETERAYDFCGTIEY 226
Query: 93 KAPELLRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
AP+++R G K D +S G+++YE++ P+
Sbjct: 227 MAPDIVRGG--DSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG----QDETGQERKLRRRKLYKAPELLRQ 100
I H +L+ N L+D ++IADFGL + G Y APE++
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-------YAAPEVI-S 175
Query: 101 PHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L G + DV+S G++LY ++ R+ P+
Sbjct: 176 GKLYAGPEV-DVWSCGVILYVMLCRRLPF 203
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG----QDETGQERKLRRRKLYKAPELLRQ 100
I H +L+ N L+D ++IADFGL + G Y APE++
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-------YAAPEVI-S 185
Query: 101 PHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L G + DV+S G++LY ++ R+ P+
Sbjct: 186 GKLYAGPEV-DVWSCGVILYVMLCRRLPF 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 21/93 (22%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG----QDETGQER----KLRRRKLYKAPE 96
I H +L+ N L+D ++IADFGL + G ++ KLY PE
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 187
Query: 97 LLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
+ DV+S G++LY ++ R+ P+
Sbjct: 188 V-------------DVWSCGVILYVMLCRRLPF 207
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +Q+ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLIIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ + +G K D ++ G+++YE+ P+
Sbjct: 210 I----ISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG----QDETGQERKLRRRKLYKAPELLRQ 100
I H +L+ N L+D ++IADFGL + G Y APE++
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-------YAAPEVI-S 184
Query: 101 PHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L G + DV+S G++LY ++ R+ P+
Sbjct: 185 GKLYAGPEV-DVWSCGVILYVMLCRRLPF 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 46 SHGNLRSSNCLIDSRWVLQIADFG------LHAFKAGQDETGQERKLRRRKL-YKAPELL 98
+H +L+ +N L+ + D G +H + Q T Q+ +R + Y+APEL
Sbjct: 156 AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELF 215
Query: 99 RQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLRPDTSSLDC 158
++ DV+S G VLY ++ +GP+ + + + +V +
Sbjct: 216 SVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSA 275
Query: 159 APSIIACMRTCWEEDPELRPDLRFVHHKLKEMN 191
++ M T DP RP + + +L+ +
Sbjct: 276 LWQLLNSMMTV---DPHQRPHIPLLLSQLEALQ 305
>pdb|2PXX|A Chain A, Human Putative Methyltransferase Mgc2408
Length = 215
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 13/98 (13%)
Query: 148 GLRPDTSSLDCAPSIIACMRTCWEEDPELR---PDLRFVHHKLKEMNAGLKANIFDNMLA 204
G P+ +S+D + ++A M+ C+ P+LR D+R + + L+ D +LA
Sbjct: 63 GGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLA 122
Query: 205 IMEKYAFNLEGEWTDWTASLRRRPKMGPCSRAASRILV 242
GE WT S + SR+LV
Sbjct: 123 ----------GERDPWTVSSEGVHTVDQVLSEVSRVLV 150
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 32 ASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG----QDETGQERKLR 87
++V H H ++ H +L+ N L+D+ +IADFGL + +D G
Sbjct: 122 SAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPN--- 175
Query: 88 RRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIIT 141
Y APE++ L G + D++S G++LY ++ G L DE + T
Sbjct: 176 ----YAAPEVI-SGRLYAGPEV-DIWSCGVILYALL-----CGTLPFDDEHVPT 218
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
+ +LHD++II H +L++ N L +++ADFG+ A K + + + A
Sbjct: 120 ALNYLHDNKII-HRDLKAGNILFTLDGDIKLADFGVSA-KNTRTXIQRRDSFIGTPYWMA 177
Query: 95 PELLR------QPHLPRGTQKGDVYSFGLVLYEVIGRQGP 128
PE++ +P+ K DV+S G+ L E+ + P
Sbjct: 178 PEVVMCETSKDRPY----DYKADVWSLGITLIEMAEIEPP 213
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +++ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLMIDQQGYIKVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +++ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLMIDQQGYIKVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +++ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLMIDQQGYIKVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +++ DFG + G+ L Y APE+
Sbjct: 157 YLHSLDLI-YRDLKPENLMIDQQGYIKVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 210
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 211 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + G+ L Y AP +
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF-----AKRVKGRTWXLCGTPEYLAPAI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +++ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLMIDQQGYIKVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N +ID + +++ DFG + G+ L Y APE+
Sbjct: 156 YLHSLDLI-YRDLKPENLMIDQQGYIKVTDFGF-----AKRVKGRTWXLCGTPEYLAPEI 209
Query: 98 LRQPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
+ L +G K D ++ G+++YE+ P+
Sbjct: 210 I----LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
++ LHD II + +L+ N L+D ++ADFG+ K G Y A
Sbjct: 136 ALMFLHDKGII-YRDLKLDNVLLDHEGHCKLADFGM--CKEGICNGVTTATFCGTPDYIA 192
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
PE+L++ D ++ G++LYE++ P+
Sbjct: 193 PEILQEMLYGPAV---DWWAMGVLLYEMLCGHAPF 224
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
S+ + +LH+ II + +L+ N L+DS +++ D+G+ K G Y
Sbjct: 131 SLALNYLHERGII-YRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSXFCGTPNY 187
Query: 93 KAPELLRQPHLPRGTQKG---DVYSFGLVLYEVIGRQGPWGHLRMTD------EEIITSV 143
APE+L RG G D ++ G++++E++ + P+ + +D E+ + V
Sbjct: 188 IAPEIL------RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 241
Query: 144 TQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELR 177
+R P + S+ A + +++ +DP+ R
Sbjct: 242 ILEKQIRIPRSMSVKAA----SVLKSFLNKDPKER 272
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 12/157 (7%)
Query: 47 HGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPELLRQPHLPRG 106
H +L + N L+ V++I DFGL R + APE L +
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY--- 251
Query: 107 TQKGDVYSFGLVLYEVIGRQ-GPWGHLRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIAC 165
T K DV+S+G++L+E+ P+ + + D + G + I
Sbjct: 252 TIKSDVWSYGILLWEIFSLGVNPYPGIPV-DANFYKLIQNGFKM---DQPFYATEEIYII 307
Query: 166 MRTCWEEDPELRPDL----RFVHHKLKEMNAGLKANI 198
M++CW D RP F+ +L + + N+
Sbjct: 308 MQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMYQNV 344
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
S+ + +LH+ II + +L+ N L+DS +++ D+G+ K G Y
Sbjct: 163 SLALNYLHERGII-YRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSTFCGTPNY 219
Query: 93 KAPELLRQPHLPRGTQKG---DVYSFGLVLYEVIGRQGPWGHLRMTD 136
APE+L RG G D ++ G++++E++ + P+ + +D
Sbjct: 220 IAPEIL------RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
S+ + +LH+ II + +L+ N L+DS +++ D+G+ K G Y
Sbjct: 116 SLALNYLHERGII-YRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSXFCGTPNY 172
Query: 93 KAPELLRQPHLPRGTQKG---DVYSFGLVLYEVIGRQGPWGHLRMTD------EEIITSV 143
APE+L RG G D ++ G++++E++ + P+ + +D E+ + V
Sbjct: 173 IAPEIL------RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 226
Query: 144 TQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELR 177
+R P + S+ A + +++ +DP+ R
Sbjct: 227 ILEKQIRIPRSLSVKAA----SVLKSFLNKDPKER 257
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 33 SVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLY 92
S+ + +LH+ II + +L+ N L+DS +++ D+G+ K G Y
Sbjct: 120 SLALNYLHERGII-YRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSXFCGTPNY 176
Query: 93 KAPELLRQPHLPRGTQKG---DVYSFGLVLYEVIGRQGPWGHLRMTD------EEIITSV 143
APE+L RG G D ++ G++++E++ + P+ + +D E+ + V
Sbjct: 177 IAPEIL------RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 230
Query: 144 TQGSGLR-PDTSSLDCAPSIIACMRTCWEEDPELR 177
+R P + S+ A + +++ +DP+ R
Sbjct: 231 ILEKQIRIPRSLSVKAA----SVLKSFLNKDPKER 261
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 25/153 (16%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYK 93
+ + +L + II H +++ N L+D + I DF + A + Q + K Y
Sbjct: 126 MALDYLQNQRII-HRDMKPDNILLDEHGHVHITDFNIAAMLPRE---TQITTMAGTKPYM 181
Query: 94 APELLRQPHLPRGTQKGDVYSF-------GLVLYEVIGRQGPWGHLR--MTDEEIITSVT 144
APE+ ++KG YSF G+ YE++ + P+ H+R + +EI+ +
Sbjct: 182 APEMF-------SSRKGAGYSFAVDWWSLGVTAYELLRGRRPY-HIRSSTSSKEIVHTFE 233
Query: 145 QGSGLRPDTSSLDCAPSIIACMRTCWEEDPELR 177
P S + +++ ++ E +P+ R
Sbjct: 234 TTVVTYPSAWSQE----MVSLLKKLLEPNPDQR 262
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+ LH + I H +L+ N L+ S +++ADFGL + Q + Y+A
Sbjct: 124 GLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA---PVVVTLWYRA 179
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ 126
PE+L Q D++S G + E+ R+
Sbjct: 180 PEVLLQSTY---ATPVDMWSVGCIFAEMFRRK 208
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL---HAFKAGQDETGQERKLRRRKL 91
G+ LH + I H +L+ N L+ S +++ADFGL ++++ D +
Sbjct: 124 GLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD------PVVVTLW 176
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ 126
Y+APE+L Q D++S G + E+ R+
Sbjct: 177 YRAPEVLLQSTY---ATPVDMWSVGCIFAEMFRRK 208
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 38 HLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKAPEL 97
+LH ++I + +L+ N LID + +Q+ DFG + K R L PE
Sbjct: 156 YLHSLDLI-YRDLKPENLLIDQQGYIQVTDFGF----------AKRVKGRTWXLCGTPEA 204
Query: 98 LR-QPHLPRGTQKG-DVYSFGLVLYEVIGRQGPW 129
L + L +G K D ++ G+++YE+ P+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 118 GLAFCHSHRVL-HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 173
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 174 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 116 GLAFCHSHRVL-HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 171
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 172 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 114 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 169
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 170 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 114 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 169
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 170 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 114 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 169
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 170 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLAFCHSHRVL-HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 114 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 169
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 170 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 114 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 169
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 170 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 117 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 172
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 173 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 118 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 173
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 174 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 118 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 173
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 174 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 117 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 172
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 173 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 114 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 169
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 170 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 116 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 171
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 172 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 117 GLAFCHSHRVL-HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 172
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 173 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 117 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 172
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 173 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLGXKY--YSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 116 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 171
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 172 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 116 GLAFCHSHRVL-HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 171
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 172 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 122 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 177
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 178 APEILLGXKY--YSTAVDIWSLGCIFAEMVTRRA 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 118 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 173
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 174 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 122 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 177
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 178 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 118 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 173
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 174 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 119 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 174
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 175 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 118 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 173
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 174 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 119 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 174
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 175 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ + HD ++ H +L+ N LI+ L+IADFGL AF + E Y+
Sbjct: 112 GIAYCHDRRVL-HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL---WYR 167
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
AP++L + + D++S G + E++
Sbjct: 168 APDVLMGSK--KYSTTIDIWSVGCIFAEMV 195
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 116 GLAFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYR 171
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 172 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL---HAFKAGQDETGQERKLRRRK 90
+G+ H+H+ ++ + +L+ +N L+D ++I+D GL + K G
Sbjct: 303 LGLEHMHNRFVV-YRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG------ 355
Query: 91 LYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLR 150
Y APE+L++ + D +S G +L++++ P+ + D+ I +T +
Sbjct: 356 -YMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 412
Query: 151 -PDTSS 155
PD+ S
Sbjct: 413 LPDSFS 418
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL---HAFKAGQDETGQERKLRRRK 90
+G+ H+H+ ++ + +L+ +N L+D ++I+D GL + K G
Sbjct: 303 LGLEHMHNRFVV-YRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG------ 355
Query: 91 LYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLR 150
Y APE+L++ + D +S G +L++++ P+ + D+ I +T +
Sbjct: 356 -YMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 412
Query: 151 -PDTSS 155
PD+ S
Sbjct: 413 LPDSFS 418
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ + HD ++ H +L+ N LI+ L+IADFGL AF + E Y+
Sbjct: 112 GIAYCHDRRVL-HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL---WYR 167
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
AP++L + + D++S G + E++
Sbjct: 168 APDVLMGSK--KYSTTIDIWSVGCIFAEMV 195
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+ LH ++ H +L+ N L+ S +++ADFGL + Q + Y+A
Sbjct: 132 GLDFLHSHRVV-HRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWYRA 187
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ 126
PE+L Q D++S G + E+ R+
Sbjct: 188 PEVLLQSSYATPV---DLWSVGCIFAEMFRRK 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+ LH + I H +L+ N L+ S +++ADFGL + Q + Y+A
Sbjct: 132 GLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL---TPVVVTLWYRA 187
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ 126
PE+L Q D++S G + E+ R+
Sbjct: 188 PEVLLQSTY---ATPVDMWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+ LH ++ H +L+ N L+ S +++ADFGL + Q + Y+A
Sbjct: 132 GLDFLHSHRVV-HRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---VVVTLWYRA 187
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ 126
PE+L Q D++S G + E+ R+
Sbjct: 188 PEVLLQSSYATPV---DLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+ LH ++ H +L+ N L+ S +++ADFGL + Q + Y+A
Sbjct: 132 GLDFLHSHRVV-HRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL---TSVVVTLWYRA 187
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ 126
PE+L Q D++S G + E+ R+
Sbjct: 188 PEVLLQSSYATPV---DLWSVGCIFAEMFRRK 216
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ + HD ++ H +L+ N LI+ L+IADFGL AF + E Y+
Sbjct: 112 GIAYCHDRRVL-HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL---WYR 167
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVI 123
AP++L + + D++S G + E++
Sbjct: 168 APDVLMGSK--KYSTTIDIWSVGCIFAEMV 195
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL---HAFKAGQDETGQERKLRRRK 90
+G+ H+H+ ++ + +L+ +N L+D ++I+D GL + K G
Sbjct: 303 LGLEHMHNRFVV-YRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG------ 355
Query: 91 LYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLR 150
Y APE+L++ + D +S G +L++++ P+ + D+ I +T +
Sbjct: 356 -YMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 412
Query: 151 -PDTSS 155
PD+ S
Sbjct: 413 LPDSFS 418
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL---HAFKAGQDETGQERKLRRRK 90
+G+ H+H+ ++ + +L+ +N L+D ++I+D GL + K G
Sbjct: 302 LGLEHMHNRFVV-YRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG------ 354
Query: 91 LYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIITSVTQGSGLR 150
Y APE+L++ + D +S G +L++++ P+ + D+ I +T +
Sbjct: 355 -YMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 411
Query: 151 -PDTSS 155
PD+ S
Sbjct: 412 LPDSFS 417
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 26/114 (22%)
Query: 34 VGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQD-------------- 78
+G +H+S II H +L+ +NCL++ ++I DFGL + +D
Sbjct: 142 LGEKFIHESGII-HRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 79 ETGQERKLRRRKL--------YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIG 124
E G K +++L Y+APEL+ T D++S G + E++
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQE--NYTNSIDIWSTGCIFAELLN 252
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGL-HAFKAGQDETGQERKLRRRKLYK 93
G+ H ++ H +L+ N LI++ +++ADFGL AF E Y+
Sbjct: 115 GLSFCHSHRVL-HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYR 170
Query: 94 APELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG 127
APE+L + D++S G + E++ R+
Sbjct: 171 APEILLG--CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 45 ISHGNLRSSNCLIDSRWVLQIADFGLHAFKAG----QDETGQERKLRRRKLYKAPELLRQ 100
I H +L+ N L+D ++IADFGL + G Y APE++
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN-------YAAPEVI-N 180
Query: 101 PHLPRGTQKGDVYSFGLVLYEVIGRQGPW 129
L G + DV+S G+VLY ++ + P+
Sbjct: 181 GKLYAGPEV-DVWSCGIVLYVMLVGRLPF 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+ + H +++ H +L+ N LI+ R L++ADFGL K+ +T + Y+
Sbjct: 112 GLAYCHRQKVL-HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL--WYRP 168
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEV 122
P++L + + D++ G + YE+
Sbjct: 169 PDILLGS--TDYSTQIDMWGVGCIFYEM 194
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKLYKA 94
G+ LH + I H +L+ N L+ S +++ADFGL + Q + Y+A
Sbjct: 124 GLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL---FPVVVTLWYRA 179
Query: 95 PELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQ 126
PE+L Q D++S G + E+ R+
Sbjct: 180 PEVLLQSTY---ATPVDMWSVGCIFAEMFRRK 208
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 32 ASVGMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQERKLRRRKL 91
++V H H ++ H +L+ N L+D+ +IADFGL + + R
Sbjct: 122 SAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL---RTSCGSPN 175
Query: 92 YKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHLRMTDEEIIT 141
Y APE++ L G + D++S G++LY ++ G L DE + T
Sbjct: 176 YAAPEVI-SGRLYAGPEV-DIWSCGVILYALL-----CGTLPFDDEHVPT 218
>pdb|2FUG|3 Chain 3, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|2FUG|C Chain C, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|2FUG|L Chain L, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|2FUG|U Chain U, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|3I9V|3 Chain 3, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 2 MolASU
pdb|3I9V|C Chain C, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 2 MolASU
pdb|3IAM|3 Chain 3, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Reduced, 2 MolASU,
WITH BOUND NADH
pdb|3IAM|C Chain C, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Reduced, 2 MolASU,
WITH BOUND NADH
pdb|3IAS|3 Chain 3, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
RE-Refined To 3.15 Angstrom Resolution
pdb|3IAS|C Chain C, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
RE-Refined To 3.15 Angstrom Resolution
pdb|3IAS|L Chain L, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
RE-Refined To 3.15 Angstrom Resolution
pdb|3IAS|U Chain U, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
RE-Refined To 3.15 Angstrom Resolution
pdb|3M9S|3 Chain 3, Crystal Structure Of Respiratory Complex I From Thermus
Thermophilus
pdb|3M9S|C Chain C, Crystal Structure Of Respiratory Complex I From Thermus
Thermophilus
pdb|2YBB|3 Chain 3, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
pdb|4HEA|3 Chain 3, Crystal Structure Of The Entire Respiratory Complex I From
Thermus Thermophilus
pdb|4HEA|D Chain D, Crystal Structure Of The Entire Respiratory Complex I From
Thermus Thermophilus
Length = 783
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 80 TGQERKLRRRKLYKAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQG-PWGHLRMTDEE 138
G+ ++ R +L+ PE R LP G Q FG V V+ R+ P GHL
Sbjct: 705 VGKAQEAARAELWAHPETARAEALPEGAQVAVETPFGRVEARVVHREDVPKGHL------ 758
Query: 139 IITSVTQGSGLR 150
++++ +GLR
Sbjct: 759 YLSALGPAAGLR 770
>pdb|1L5C|A Chain A, Solution Structure Of The Monomeric Form Of A Mutant
Unliganded Bovine Neurophysin, 20 Structures
pdb|1L5D|A Chain A, Solution Structure Of The Monomeric Form Of A Mutant
Unliganded Bovine Neurophysin, Minimized Average
Structure
pdb|2LBN|A Chain A, (Revised) Solution Structure Of The Monomeric Form Of A
Mutant Unliganded Bovine Neurophysin, 20 Structures
Length = 92
Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 132 LRMTDEEIITSVTQGSGLRPDTSSLDCAPSIIACMRTCWEEDPELRPDLRF 182
LR +E + S Q SG +P S CA + I C EEDP P+ F
Sbjct: 42 LRCQEENYLPSPCQ-SGQKPCGSGGRCAAAGICCSPDGCEEDPACDPEAAF 91
>pdb|3HLS|A Chain A, Crystal Structure Of The Signaling Helix Coiled-Coil
Doimain Of The Beta-1 Subunit Of The Soluble Guanylyl
Cyclase
pdb|3HLS|B Chain B, Crystal Structure Of The Signaling Helix Coiled-Coil
Doimain Of The Beta-1 Subunit Of The Soluble Guanylyl
Cyclase
pdb|3HLS|C Chain C, Crystal Structure Of The Signaling Helix Coiled-Coil
Doimain Of The Beta-1 Subunit Of The Soluble Guanylyl
Cyclase
pdb|3HLS|D Chain D, Crystal Structure Of The Signaling Helix Coiled-Coil
Doimain Of The Beta-1 Subunit Of The Soluble Guanylyl
Cyclase
pdb|3HLS|E Chain E, Crystal Structure Of The Signaling Helix Coiled-Coil
Doimain Of The Beta-1 Subunit Of The Soluble Guanylyl
Cyclase
pdb|3HLS|F Chain F, Crystal Structure Of The Signaling Helix Coiled-Coil
Doimain Of The Beta-1 Subunit Of The Soluble Guanylyl
Cyclase
pdb|3HLS|G Chain G, Crystal Structure Of The Signaling Helix Coiled-Coil
Doimain Of The Beta-1 Subunit Of The Soluble Guanylyl
Cyclase
pdb|3HLS|H Chain H, Crystal Structure Of The Signaling Helix Coiled-Coil
Doimain Of The Beta-1 Subunit Of The Soluble Guanylyl
Cyclase
Length = 66
Score = 30.0 bits (66), Expect = 2.5, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 305 LTQEKKKTDALLHRMLPRSVSESLK 329
L EKKKTD LL+ +LP SV+ L+
Sbjct: 40 LEDEKKKTDTLLYSVLPPSVANELR 64
>pdb|1WC0|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp
pdb|1WC0|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp
pdb|1WC3|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Strontium
pdb|1WC3|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Strontium
pdb|1WC4|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Europium
pdb|1WC4|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Europium
pdb|1WC5|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|1WC5|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|1WC5|C Chain C, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|1WC5|D Chain D, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|2BW7|A Chain A, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
pdb|2BW7|B Chain B, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
pdb|2BW7|C Chain C, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
pdb|2BW7|D Chain D, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
Length = 219
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 328 LKRGDFVEPESFDSVTIYFSDIVGFTQLS 356
+ RG + PE +TI FSDIVGFT++S
Sbjct: 15 VPRGSHMRPEP-RLITILFSDIVGFTRMS 42
>pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
Mg
pdb|1U0H|A Chain A, Structural Basis For The Inhibition Of Mammalian Adenylyl
Cyclase By Mant-gtp
pdb|2GVD|A Chain A, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With Tnp-Atp And Mn
pdb|2GVZ|A Chain A, Crystal Structure Of Complex Of Gs- With The Catalytic
Domains Of Mammalian Adenylyl Cyclase: Complex With
Mant- Atp And Mn
pdb|3C14|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Ca
pdb|3C15|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Mg
pdb|3C16|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Adenosine-5'-Triphosphate And Ca
pdb|3G82|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Mant-Itp And Mn
pdb|3MAA|A Chain A, Complex Of Gs-alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5-o-(l-thiophosphate) And Low Ca Concentration
Length = 225
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 337 ESFDSVTIYFSDIVGFTQLSAESTETGRVTT 367
+ D+V+I F+DI GFT L+++ T V T
Sbjct: 30 QKHDNVSILFADIEGFTSLASQCTAQELVMT 60
>pdb|1CJK|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn
pdb|1CJT|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mn, And Mg
pdb|1CJU|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp And Mg
pdb|1CJV|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mg, And Zn
pdb|1CUL|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg
pdb|1TL7|A Chain A, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With 2'(3')-O-(N-
Methylanthraniloyl)-Guanosine 5'-Triphosphate And Mn
Length = 217
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 337 ESFDSVTIYFSDIVGFTQLSAESTETGRVTT 367
+ D+V+I F+DI GFT L+++ T V T
Sbjct: 22 QKHDNVSILFADIEGFTSLASQCTAQELVMT 52
>pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
Length = 220
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 337 ESFDSVTIYFSDIVGFTQLSAESTETGRVTT 367
+ D+V+I F+DI GFT L+++ T V T
Sbjct: 30 QKHDNVSILFADIEGFTSLASQCTAQELVMT 60
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 35 GMIHLHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQ--DETGQERKLRRRKLY 92
G+ +LH I H ++++ N L+++ ++ADFG+ AGQ D + + +
Sbjct: 137 GLEYLHFMRKI-HRDIKAGNILLNTEGHAKLADFGV----AGQLTDXMAKRNXVIGTPFW 191
Query: 93 KAPELLRQPHLPRGTQKGDVYSFGLVLYEVIGRQGPWGHL 132
APE++++ D++S G+ E+ + P+ +
Sbjct: 192 MAPEVIQEIGY---NCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|1TE5|A Chain A, The 2.0 Angstrom Crystal Structure Of Predicted Glutamine
Amidotransferase From Pseudomonas Aeruginosa Pa01
pdb|1TE5|B Chain B, The 2.0 Angstrom Crystal Structure Of Predicted Glutamine
Amidotransferase From Pseudomonas Aeruginosa Pa01
Length = 257
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 222 ASLRRRPKMGPCSRAASRILV-FWLFGLLDKICTIFVFLSETKAENWALHQGRIQDFGFW 280
A + RR GP + + V F D + T+ T ENW L Q G W
Sbjct: 189 AYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATEPLTDNENWTLQQS-----GEW 243
Query: 281 AFWFTGQNLHHFRV 294
W+ G+ L RV
Sbjct: 244 VLWWGGEVLAKGRV 257
>pdb|2CRU|A Chain A, Solution Structure Of Programmed Cell Death 5
Length = 118
Score = 28.9 bits (63), Expect = 5.2, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 307 QEKKKTDALLHRMLPRSVSESLKRGDFVEPESFDSVTIYFSDIVGFTQLSAESTETGRV- 365
+E + +++L ++L +S L V+PE +V Y + + QLS + +E G +
Sbjct: 34 REAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIE 93
Query: 366 ----TTRDSRRTPDLKVGGSNP 383
++ + +T +K S P
Sbjct: 94 ILKKVSQQTEKTTTVKFNRSGP 115
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 39 LHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQER-KLRRRKLYKAPEL 97
LH II H +L++ N L+ +++ADFG+ A +T Q+R + APE+
Sbjct: 125 LHSKRII-HRDLKAGNVLMTLEGDIRLADFGV---SAKNLKTLQKRDSFIGTPYWMAPEV 180
Query: 98 LRQPHLPRG--TQKGDVYSFGLVLYEVIGRQGP 128
+ + K D++S G+ L E+ + P
Sbjct: 181 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 39 LHDSEIISHGNLRSSNCLIDSRWVLQIADFGLHAFKAGQDETGQER-KLRRRKLYKAPEL 97
LH II H +L++ N L+ +++ADFG+ A +T Q+R + APE+
Sbjct: 133 LHSKRII-HRDLKAGNVLMTLEGDIRLADFGV---SAKNLKTLQKRDSFIGTPYWMAPEV 188
Query: 98 LRQPHLPRG--TQKGDVYSFGLVLYEVIGRQGP 128
+ + K D++S G+ L E+ + P
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,519,040
Number of Sequences: 62578
Number of extensions: 511714
Number of successful extensions: 2022
Number of sequences better than 100.0: 654
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 446
Number of HSP's that attempted gapping in prelim test: 1242
Number of HSP's gapped (non-prelim): 658
length of query: 423
length of database: 14,973,337
effective HSP length: 101
effective length of query: 322
effective length of database: 8,652,959
effective search space: 2786252798
effective search space used: 2786252798
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)