Query psy1844
Match_columns 120
No_of_seqs 109 out of 1181
Neff 8.0
Searched_HMMs 46136
Date Fri Aug 16 17:46:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1844.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1844hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2450|consensus 100.0 5.2E-33 1.1E-37 218.0 10.7 119 2-120 129-248 (501)
2 COG1012 PutA NAD-dependent ald 100.0 1.9E-31 4E-36 212.0 12.1 120 1-120 103-223 (472)
3 KOG2451|consensus 100.0 7.4E-31 1.6E-35 200.6 11.9 120 1-120 128-252 (503)
4 PRK11241 gabD succinate-semial 100.0 1.4E-29 3E-34 201.7 12.2 119 2-120 116-236 (482)
5 PLN02766 coniferyl-aldehyde de 100.0 2.2E-29 4.8E-34 201.4 12.6 118 2-119 129-247 (501)
6 cd07126 ALDH_F12_P5CDH Delta(1 100.0 3.4E-29 7.4E-34 199.8 11.9 117 2-119 110-230 (489)
7 PLN02466 aldehyde dehydrogenas 100.0 3.9E-29 8.6E-34 201.3 12.2 118 2-119 166-284 (538)
8 cd07142 ALDH_F2BC Arabidosis a 100.0 4.1E-29 8.9E-34 198.6 12.1 118 2-119 112-230 (476)
9 PRK10090 aldehyde dehydrogenas 100.0 7.1E-29 1.5E-33 194.3 12.4 119 1-119 40-160 (409)
10 PLN02419 methylmalonate-semial 100.0 5.3E-29 1.1E-33 202.3 11.9 118 2-120 219-338 (604)
11 PLN02278 succinic semialdehyde 100.0 1.5E-28 3.2E-33 196.5 12.3 118 2-119 130-249 (498)
12 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 1.7E-28 3.6E-33 196.6 12.5 119 2-120 137-256 (512)
13 cd07143 ALDH_AldA_AN0554 Asper 100.0 1.6E-28 3.4E-33 195.6 12.1 118 2-119 115-233 (481)
14 cd07109 ALDH_AAS00426 Uncharac 100.0 2.5E-28 5.5E-33 192.9 12.8 118 2-119 88-206 (454)
15 PLN02467 betaine aldehyde dehy 100.0 2E-28 4.4E-33 195.9 12.3 118 2-119 118-240 (503)
16 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 2.1E-28 4.6E-33 194.6 12.1 117 2-119 107-224 (479)
17 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 2.6E-28 5.7E-33 194.3 12.5 118 2-119 115-233 (484)
18 cd07119 ALDH_BADH-GbsA Bacillu 100.0 2.7E-28 5.9E-33 194.0 12.5 118 2-119 105-223 (482)
19 TIGR01804 BADH glycine betaine 100.0 2.4E-28 5.3E-33 193.7 12.2 118 2-119 104-222 (467)
20 TIGR01236 D1pyr5carbox1 delta- 100.0 2.3E-28 5.1E-33 196.7 12.2 118 2-119 139-258 (533)
21 PRK13968 putative succinate se 100.0 2.5E-28 5.4E-33 193.6 12.1 117 2-119 97-214 (462)
22 cd07091 ALDH_F1-2_Ald2-like AL 100.0 2.7E-28 5.9E-33 193.7 12.2 118 2-119 112-230 (476)
23 TIGR01780 SSADH succinate-semi 100.0 2.7E-28 5.8E-33 192.6 12.1 118 2-119 87-207 (448)
24 cd07123 ALDH_F4-17_P5CDH Delta 100.0 2.5E-28 5.5E-33 196.1 12.0 118 2-119 139-258 (522)
25 cd07140 ALDH_F1L_FTFDH 10-form 100.0 2.6E-28 5.5E-33 194.7 12.0 118 2-119 114-236 (486)
26 TIGR03250 PhnAcAld_DH putative 100.0 3.3E-28 7.1E-33 193.4 12.4 118 2-119 104-228 (472)
27 cd07113 ALDH_PADH_NahF Escheri 100.0 3.1E-28 6.7E-33 193.6 12.0 117 2-119 107-230 (477)
28 cd07110 ALDH_F10_BADH Arabidop 100.0 3.6E-28 7.8E-33 192.1 12.2 118 2-119 87-209 (456)
29 PRK13252 betaine aldehyde dehy 100.0 3E-28 6.6E-33 194.1 11.8 117 2-119 113-230 (488)
30 cd07083 ALDH_P5CDH ALDH subfam 100.0 3.7E-28 7.9E-33 194.2 12.3 118 2-119 123-243 (500)
31 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 4.3E-28 9.3E-33 192.0 12.5 118 2-119 88-207 (455)
32 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 4.1E-28 8.8E-33 193.1 12.2 118 2-119 116-234 (481)
33 PRK03137 1-pyrroline-5-carboxy 100.0 4.8E-28 1E-32 194.1 12.6 119 2-120 141-261 (514)
34 PRK09847 gamma-glutamyl-gamma- 100.0 5.2E-28 1.1E-32 193.2 12.7 118 2-119 128-246 (494)
35 TIGR01237 D1pyr5carbox2 delta- 100.0 4E-28 8.8E-33 194.4 11.9 118 2-119 137-256 (511)
36 PLN02315 aldehyde dehydrogenas 100.0 4.8E-28 1E-32 194.0 12.2 117 2-119 124-246 (508)
37 cd07118 ALDH_SNDH Gluconobacte 100.0 5E-28 1.1E-32 191.4 12.1 118 2-119 89-208 (454)
38 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 4.9E-28 1.1E-32 192.2 12.0 118 2-119 105-224 (473)
39 cd07112 ALDH_GABALDH-PuuC Esch 100.0 4.3E-28 9.4E-33 192.1 11.5 118 2-119 95-213 (462)
40 PRK09406 gabD1 succinic semial 100.0 5.4E-28 1.2E-32 191.5 11.8 117 2-119 91-211 (457)
41 cd07115 ALDH_HMSADH_HapE Pseud 100.0 5.8E-28 1.3E-32 190.8 11.9 118 2-119 88-206 (453)
42 PRK09457 astD succinylglutamic 100.0 8.2E-28 1.8E-32 191.7 12.5 116 3-119 106-222 (487)
43 TIGR03374 ABALDH 1-pyrroline d 100.0 6.9E-28 1.5E-32 191.6 12.0 117 2-119 107-225 (472)
44 cd07150 ALDH_VaniDH_like Pseud 100.0 7.9E-28 1.7E-32 189.8 12.1 118 2-119 89-208 (451)
45 cd07559 ALDH_ACDHII_AcoD-like 100.0 6.8E-28 1.5E-32 191.9 11.8 117 2-119 107-224 (480)
46 cd07145 ALDH_LactADH_F420-Bios 100.0 7.9E-28 1.7E-32 190.2 12.1 118 2-119 89-212 (456)
47 cd07148 ALDH_RL0313 Uncharacte 100.0 9.4E-28 2E-32 189.9 12.1 117 2-119 90-212 (455)
48 cd07095 ALDH_SGSD_AstD N-succi 100.0 1.1E-27 2.3E-32 188.6 11.8 117 2-119 68-185 (431)
49 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 1.2E-27 2.6E-32 188.8 12.1 98 22-119 86-188 (439)
50 cd07089 ALDH_CddD-AldA-like Rh 99.9 1.4E-27 3E-32 189.1 12.1 118 2-119 89-212 (459)
51 cd07117 ALDH_StaphAldA1 Unchar 99.9 1.3E-27 2.9E-32 190.1 11.9 117 2-119 107-224 (475)
52 cd07151 ALDH_HBenzADH NADP+-de 99.9 1.5E-27 3.4E-32 189.0 12.0 118 2-119 100-220 (465)
53 cd07131 ALDH_AldH-CAJ73105 Unc 99.9 1.9E-27 4.2E-32 188.9 12.5 118 2-119 105-224 (478)
54 TIGR02299 HpaE 5-carboxymethyl 99.9 1.7E-27 3.7E-32 189.7 11.9 117 2-119 106-224 (488)
55 cd07121 ALDH_EutE Ethanolamine 99.9 1.4E-27 3E-32 188.0 11.1 96 24-119 90-190 (429)
56 TIGR03240 arg_catab_astD succi 99.9 2.2E-27 4.7E-32 189.1 12.4 116 3-119 104-220 (484)
57 cd07100 ALDH_SSADH1_GabD1 Myco 99.9 2.2E-27 4.7E-32 186.6 12.1 117 2-119 67-184 (429)
58 cd07138 ALDH_CddD_SSP0762 Rhod 99.9 2E-27 4.3E-32 188.4 11.8 114 2-119 105-219 (466)
59 TIGR03216 OH_muco_semi_DH 2-hy 99.9 3E-27 6.6E-32 188.1 12.7 118 2-119 106-229 (481)
60 cd07088 ALDH_LactADH-AldA Esch 99.9 2.5E-27 5.4E-32 187.7 12.1 118 2-119 103-222 (468)
61 cd07146 ALDH_PhpJ Streptomyces 99.9 2.7E-27 6E-32 187.1 12.2 118 2-119 86-209 (451)
62 PRK11904 bifunctional proline 99.9 2.1E-27 4.5E-32 202.1 12.3 119 1-119 652-773 (1038)
63 cd07105 ALDH_SaliADH Salicylal 99.9 3.2E-27 6.9E-32 185.7 12.3 118 2-119 68-190 (432)
64 cd07107 ALDH_PhdK-like Nocardi 99.9 3.5E-27 7.5E-32 186.6 12.3 117 2-119 87-204 (456)
65 cd07086 ALDH_F7_AASADH-like NA 99.9 4.2E-27 9.1E-32 187.2 12.7 117 2-119 103-225 (478)
66 cd07114 ALDH_DhaS Uncharacteri 99.9 3.6E-27 7.8E-32 186.5 12.2 118 2-119 89-208 (457)
67 PLN02174 aldehyde dehydrogenas 99.9 3.9E-27 8.4E-32 187.8 12.4 116 2-120 79-199 (484)
68 cd07090 ALDH_F9_TMBADH NAD+-de 99.9 2.9E-27 6.3E-32 187.0 11.5 117 2-119 87-204 (457)
69 PRK15398 aldehyde dehydrogenas 99.9 3.9E-27 8.4E-32 187.1 12.2 98 23-120 121-223 (465)
70 cd07152 ALDH_BenzADH NAD-depen 99.9 3.9E-27 8.4E-32 185.7 11.8 117 2-119 81-199 (443)
71 PRK11809 putA trifunctional tr 99.9 1.9E-27 4.2E-32 204.9 10.7 109 1-120 749-858 (1318)
72 cd07094 ALDH_F21_LactADH-like 99.9 5.3E-27 1.1E-31 185.3 12.2 118 2-119 89-212 (453)
73 TIGR02288 PaaN_2 phenylacetic 99.9 3.4E-27 7.5E-32 190.3 11.0 118 2-119 157-287 (551)
74 cd07104 ALDH_BenzADH-like ALDH 99.9 8E-27 1.7E-31 183.0 12.6 118 2-119 68-188 (431)
75 cd07139 ALDH_AldA-Rv0768 Mycob 99.9 6.3E-27 1.4E-31 185.7 12.1 117 2-119 107-225 (471)
76 cd07130 ALDH_F7_AASADH NAD+-de 99.9 1E-26 2.2E-31 184.9 12.9 117 2-119 102-224 (474)
77 cd07122 ALDH_F20_ACDH Coenzyme 99.9 4E-27 8.7E-32 185.7 10.4 99 21-119 85-188 (436)
78 PRK13473 gamma-aminobutyraldeh 99.9 1.1E-26 2.3E-31 184.6 12.9 117 2-119 108-226 (475)
79 cd07093 ALDH_F8_HMSADH Human a 99.9 8.8E-27 1.9E-31 184.0 12.3 118 2-119 88-206 (455)
80 cd07085 ALDH_F6_MMSDH Methylma 99.9 9.8E-27 2.1E-31 185.0 12.6 117 2-119 106-224 (478)
81 cd07102 ALDH_EDX86601 Uncharac 99.9 8.6E-27 1.9E-31 183.9 12.0 117 2-119 86-204 (452)
82 TIGR01722 MMSDH methylmalonic 99.9 1.2E-26 2.6E-31 184.5 12.2 117 2-119 106-224 (477)
83 cd07103 ALDH_F5_SSADH_GabD Mit 99.9 1.2E-26 2.6E-31 183.0 12.1 118 2-119 87-206 (451)
84 PF00171 Aldedh: Aldehyde dehy 99.9 4E-27 8.8E-32 186.4 9.2 119 1-119 96-215 (462)
85 cd07125 ALDH_PutA-P5CDH Delta( 99.9 1.7E-26 3.6E-31 185.4 12.6 118 2-119 137-256 (518)
86 cd07147 ALDH_F21_RNP123 Aldehy 99.9 1.7E-26 3.7E-31 182.3 11.5 117 2-119 89-211 (452)
87 cd07092 ALDH_ABALDH-YdcW Esche 99.9 2.8E-26 6.2E-31 180.9 12.2 117 2-119 88-206 (450)
88 cd07082 ALDH_F11_NP-GAPDH NADP 99.9 3.5E-26 7.5E-31 181.5 12.3 118 2-119 107-230 (473)
89 cd07108 ALDH_MGR_2402 Magnetos 99.9 5.4E-26 1.2E-30 179.8 12.5 117 2-119 88-205 (457)
90 cd07149 ALDH_y4uC Uncharacteri 99.9 5.3E-26 1.1E-30 179.3 12.3 119 2-120 89-213 (453)
91 PRK11905 bifunctional proline 99.9 2.6E-26 5.5E-31 197.5 10.8 109 1-120 657-766 (1208)
92 cd07101 ALDH_SSADH2_GabD2 Myco 99.9 8.2E-26 1.8E-30 178.7 12.4 116 2-119 86-205 (454)
93 PLN00412 NADP-dependent glycer 99.9 9.9E-26 2.1E-30 180.2 12.6 95 24-118 151-246 (496)
94 cd07136 ALDH_YwdH-P39616 Bacil 99.9 9E-26 1.9E-30 178.6 12.2 117 1-120 66-187 (449)
95 TIGR02518 EutH_ACDH acetaldehy 99.9 9.8E-26 2.1E-30 180.0 12.3 100 20-119 93-197 (488)
96 PRK09407 gabD2 succinic semial 99.9 9.2E-26 2E-30 181.4 12.0 116 2-119 122-241 (524)
97 PLN02203 aldehyde dehydrogenas 99.9 1.2E-25 2.5E-30 179.4 12.3 116 2-120 75-195 (484)
98 cd07135 ALDH_F14-YMR110C Sacch 99.9 1.3E-25 2.9E-30 177.0 12.1 116 2-120 74-195 (436)
99 TIGR01238 D1pyr5carbox3 delta- 99.9 8E-26 1.7E-30 180.9 10.8 92 28-119 157-249 (500)
100 cd07137 ALDH_F3FHI Plant aldeh 99.9 1.7E-25 3.7E-30 176.3 12.2 116 2-120 68-188 (432)
101 cd07099 ALDH_DDALDH Methylomon 99.9 1.7E-25 3.7E-30 176.6 12.2 116 2-119 86-206 (453)
102 TIGR00407 proA gamma-glutamyl 99.9 7.7E-26 1.7E-30 176.7 9.7 116 2-119 72-195 (398)
103 COG4230 Delta 1-pyrroline-5-ca 99.9 1.3E-26 2.8E-31 183.9 5.3 109 1-120 217-326 (769)
104 cd07084 ALDH_KGSADH-like ALDH 99.9 2.2E-25 4.7E-30 176.1 12.2 117 2-119 66-189 (442)
105 cd07129 ALDH_KGSADH Alpha-Keto 99.9 1.8E-25 3.9E-30 177.0 11.7 98 23-120 97-201 (454)
106 cd07098 ALDH_F15-22 Aldehyde d 99.9 2.3E-25 5E-30 176.5 12.4 97 22-119 111-212 (465)
107 cd07128 ALDH_MaoC-N N-terminal 99.9 1.3E-25 2.8E-30 180.1 10.5 116 2-120 104-232 (513)
108 PTZ00381 aldehyde dehydrogenas 99.9 3.5E-25 7.7E-30 176.9 12.5 94 23-119 101-195 (493)
109 cd07133 ALDH_CALDH_CalB Conife 99.9 3.5E-25 7.7E-30 174.5 12.3 116 2-120 68-188 (434)
110 cd07111 ALDH_F16 Aldehyde dehy 99.9 1.6E-25 3.5E-30 178.4 10.2 93 26-119 142-235 (480)
111 cd07106 ALDH_AldA-AAD23400 Str 99.9 3.5E-25 7.5E-30 174.7 11.7 114 2-119 87-201 (446)
112 cd07077 ALDH-like NAD(P)+-depe 99.9 3.2E-25 6.8E-30 172.9 11.0 115 2-119 73-191 (397)
113 cd07127 ALDH_PAD-PaaZ Phenylac 99.9 4.1E-25 8.8E-30 178.3 11.5 93 27-119 189-287 (549)
114 PRK11903 aldehyde dehydrogenas 99.9 4.6E-25 9.9E-30 177.3 11.1 117 1-120 108-236 (521)
115 PLN02418 delta-1-pyrroline-5-c 99.9 4.2E-25 9E-30 182.8 11.2 113 2-119 374-494 (718)
116 TIGR02278 PaaN-DH phenylacetic 99.9 8E-25 1.7E-29 179.9 11.8 116 2-120 104-232 (663)
117 PRK13805 bifunctional acetalde 99.9 1.5E-24 3.2E-29 182.5 12.0 99 21-119 98-201 (862)
118 cd07087 ALDH_F3-13-14_CALDH-li 99.9 2.2E-24 4.8E-29 169.5 12.0 115 2-119 67-186 (426)
119 PRK11563 bifunctional aldehyde 99.9 1.8E-24 3.9E-29 178.2 11.4 93 25-120 141-236 (675)
120 cd07079 ALDH_F18-19_ProA-GPR G 99.9 1.7E-24 3.7E-29 169.4 10.0 97 22-120 100-202 (406)
121 cd07134 ALDH_AlkH-like Pseudom 99.9 5.1E-24 1.1E-28 167.9 12.1 95 22-119 91-186 (433)
122 PRK00197 proA gamma-glutamyl p 99.9 4.2E-24 9.1E-29 167.7 10.4 97 22-120 106-208 (417)
123 cd07132 ALDH_F3AB Aldehyde deh 99.9 1.1E-23 2.3E-28 166.5 12.6 116 2-120 67-187 (443)
124 cd06534 ALDH-SF NAD(P)+-depend 99.9 2E-23 4.4E-28 160.6 12.9 118 2-119 62-181 (367)
125 cd07078 ALDH NAD(P)+ dependent 99.9 3.5E-23 7.5E-28 162.2 12.8 118 2-119 66-185 (432)
126 TIGR01092 P5CS delta l-pyrroli 99.9 3.6E-23 7.8E-28 171.3 10.4 94 22-119 388-486 (715)
127 KOG2456|consensus 99.9 5.8E-23 1.3E-27 158.1 9.7 98 20-120 93-191 (477)
128 KOG2455|consensus 99.8 3.5E-20 7.6E-25 144.0 7.1 117 2-119 169-285 (561)
129 KOG2454|consensus 99.8 1.4E-19 3E-24 139.4 7.0 94 25-119 182-280 (583)
130 cd07080 ALDH_Acyl-CoA-Red_LuxC 99.8 2E-18 4.4E-23 135.8 8.5 94 22-119 103-203 (422)
131 KOG2452|consensus 99.6 1E-15 2.3E-20 120.8 5.8 99 2-120 530-632 (881)
132 KOG2453|consensus 99.6 3.8E-15 8.3E-20 113.4 5.1 118 2-120 123-246 (507)
133 COG0014 ProA Gamma-glutamyl ph 99.1 2.6E-10 5.5E-15 88.6 6.8 98 20-119 103-206 (417)
134 PRK11905 bifunctional proline 98.5 1E-07 2.2E-12 83.5 4.7 86 16-119 1064-1150(1208)
135 KOG4165|consensus 98.4 7E-07 1.5E-11 68.5 6.5 97 20-119 100-201 (433)
136 PF05893 LuxC: Acyl-CoA reduct 98.4 2.4E-06 5.2E-11 67.3 8.7 92 25-119 81-178 (399)
137 PRK11809 putA trifunctional tr 95.1 0.033 7.1E-07 50.1 4.5 49 16-68 1173-1222(1318)
138 COG0521 MoaB Molybdopterin bio 80.0 6.5 0.00014 27.7 5.4 49 70-119 26-77 (169)
139 TIGR02667 moaB_proteo molybden 76.3 6.9 0.00015 27.1 4.6 48 72-119 23-73 (163)
140 PF14097 SpoVAE: Stage V sporu 74.9 10 0.00022 26.9 5.1 47 69-115 36-88 (180)
141 PF00994 MoCF_biosynth: Probab 65.2 9.8 0.00021 25.4 3.3 54 66-119 12-66 (144)
142 cd00886 MogA_MoaB MogA_MoaB fa 62.6 16 0.00034 24.8 4.0 47 73-119 22-71 (152)
143 PRK05066 arginine repressor; P 62.2 17 0.00037 25.2 4.1 46 48-96 81-128 (156)
144 smart00852 MoCF_biosynth Proba 60.9 20 0.00043 23.6 4.2 48 72-119 19-67 (135)
145 COG0278 Glutaredoxin-related p 59.2 13 0.00028 24.2 2.8 63 51-115 7-77 (105)
146 TIGR00177 molyb_syn molybdenum 58.3 22 0.00048 23.8 4.1 49 71-119 27-76 (144)
147 cd00758 MoCF_BD MoCF_BD: molyb 58.0 21 0.00046 23.5 4.0 50 70-119 18-68 (133)
148 cd00885 cinA Competence-damage 54.8 32 0.00068 23.9 4.5 50 70-119 18-68 (170)
149 cd00532 MGS-like MGS-like doma 54.5 33 0.00071 21.9 4.3 42 77-118 35-77 (112)
150 PF11009 DUF2847: Protein of u 54.4 12 0.00026 24.3 2.2 58 58-117 20-87 (105)
151 PRK03604 moaC bifunctional mol 54.2 30 0.00064 26.7 4.6 51 69-119 173-225 (312)
152 COG1438 ArgR Arginine represso 50.7 34 0.00074 23.7 4.0 36 57-96 91-126 (150)
153 PTZ00129 40S ribosomal protein 49.1 60 0.0013 22.4 5.0 85 30-115 26-129 (149)
154 PRK09417 mogA molybdenum cofac 47.8 60 0.0013 23.2 5.1 49 71-119 23-76 (193)
155 PF13344 Hydrolase_6: Haloacid 45.3 26 0.00057 22.0 2.7 60 58-119 30-89 (101)
156 PRK10680 molybdopterin biosynt 43.3 66 0.0014 25.7 5.2 47 73-119 206-253 (411)
157 PF08002 DUF1697: Protein of u 42.5 75 0.0016 21.3 4.7 51 54-108 38-90 (137)
158 PRK03670 competence damage-ind 41.8 63 0.0014 24.1 4.6 48 72-119 21-70 (252)
159 PRK00441 argR arginine repress 40.8 87 0.0019 21.4 4.9 48 45-96 75-124 (149)
160 TIGR01529 argR_whole arginine 40.4 90 0.002 21.2 4.9 48 45-96 73-122 (146)
161 PRK13769 histidinol dehydrogen 38.2 1.2E+02 0.0027 24.0 5.9 44 20-64 82-126 (368)
162 PF02142 MGS: MGS-like domain 37.7 41 0.0009 20.7 2.7 43 76-118 22-69 (95)
163 PF04398 DUF538: Protein of un 37.2 18 0.0004 23.5 1.0 15 76-90 2-16 (110)
164 PF12617 LdpA_C: Iron-Sulfur b 35.6 1.2E+02 0.0027 21.7 5.0 85 32-117 37-142 (183)
165 PRK01215 competence damage-ind 35.2 81 0.0018 23.6 4.3 48 72-119 24-72 (264)
166 PF01596 Methyltransf_3: O-met 35.1 1.3E+02 0.0028 21.6 5.2 51 67-118 77-130 (205)
167 PRK09607 rps11p 30S ribosomal 34.2 1.5E+02 0.0032 20.1 6.8 63 30-92 7-78 (132)
168 COG4230 Delta 1-pyrroline-5-ca 33.6 81 0.0017 26.9 4.3 49 17-69 630-679 (769)
169 PRK03341 arginine repressor; P 33.4 1.3E+02 0.0028 21.1 4.9 48 45-96 92-141 (168)
170 PLN02589 caffeoyl-CoA O-methyl 33.3 1.8E+02 0.0039 21.6 5.9 49 69-118 113-165 (247)
171 PRK04280 arginine repressor; P 32.1 1E+02 0.0022 21.0 4.1 49 44-96 74-124 (148)
172 COG1058 CinA Predicted nucleot 31.9 1E+02 0.0022 23.2 4.3 46 73-118 23-69 (255)
173 cd03522 MoeA_like MoeA_like. T 31.7 99 0.0021 23.9 4.4 50 70-119 178-229 (312)
174 cd00887 MoeA MoeA family. Memb 31.5 54 0.0012 25.9 3.0 49 71-119 195-244 (394)
175 COG2082 CobH Precorrin isomera 30.7 2.2E+02 0.0047 20.9 5.9 53 58-118 128-188 (210)
176 COG2006 Uncharacterized conser 29.7 88 0.0019 24.0 3.7 31 58-88 37-78 (293)
177 PF06463 Mob_synth_C: Molybden 29.6 74 0.0016 21.0 3.0 64 20-83 46-118 (128)
178 PF14974 DUF4511: Domain of un 29.4 15 0.00033 23.9 -0.3 32 57-88 34-65 (105)
179 PLN02699 Bifunctional molybdop 29.3 91 0.002 26.6 4.1 47 73-119 211-259 (659)
180 COG0100 RpsK Ribosomal protein 28.8 81 0.0018 21.3 3.1 72 30-101 16-96 (129)
181 PRK14690 molybdopterin biosynt 28.8 92 0.002 25.0 3.9 48 72-119 221-269 (419)
182 COG1736 DPH2 Diphthamide synth 28.8 1.7E+02 0.0037 23.1 5.2 65 52-120 231-299 (347)
183 PF02375 JmjN: jmjN domain; I 28.5 42 0.0009 17.2 1.3 19 76-94 16-34 (34)
184 cd01424 MGS_CPS_II Methylglyox 28.2 1.1E+02 0.0025 19.1 3.7 39 77-116 36-74 (110)
185 PRK00549 competence damage-ind 26.9 1.5E+02 0.0032 23.8 4.7 60 58-119 9-69 (414)
186 PF00815 Histidinol_dh: Histid 26.9 1.1E+02 0.0024 24.7 4.0 65 20-85 95-165 (412)
187 cd01422 MGS Methylglyoxal synt 26.6 1.4E+02 0.003 19.2 3.9 40 77-118 37-79 (115)
188 TIGR00069 hisD histidinol dehy 26.4 2E+02 0.0044 23.1 5.3 44 20-63 77-123 (393)
189 PRK14497 putative molybdopteri 26.2 1.2E+02 0.0025 25.5 4.2 47 73-119 208-255 (546)
190 PLN02476 O-methyltransferase 25.8 2.8E+02 0.0061 21.0 5.9 51 67-118 150-203 (278)
191 TIGR03628 arch_S11P archaeal r 25.2 2.1E+02 0.0045 18.8 6.9 84 32-115 2-103 (114)
192 TIGR00322 diphth2_R diphthamid 25.0 2.3E+02 0.0049 22.0 5.4 53 64-120 242-294 (332)
193 TIGR03427 ABC_peri_uca ABC tra 24.9 2.2E+02 0.0048 21.9 5.3 44 71-115 116-159 (328)
194 PRK14540 nucleoside diphosphat 24.8 1.1E+02 0.0023 20.4 3.1 44 61-104 7-50 (134)
195 smart00851 MGS MGS-like domain 24.4 1.2E+02 0.0026 18.3 3.1 40 77-117 23-63 (90)
196 PTZ00093 nucleoside diphosphat 23.7 1.1E+02 0.0024 20.8 3.1 38 61-98 7-44 (149)
197 COG3914 Spy Predicted O-linked 23.5 4.7E+02 0.01 22.4 9.9 59 54-114 455-513 (620)
198 KOG0911|consensus 23.4 1.1E+02 0.0024 22.6 3.2 53 63-115 145-200 (227)
199 TIGR02990 ectoine_eutA ectoine 23.0 3.1E+02 0.0068 20.1 5.8 76 42-117 101-189 (239)
200 PF15643 Tox-PL-2: Papain fold 22.7 1.7E+02 0.0037 18.9 3.6 30 66-95 18-47 (100)
201 smart00562 NDK These are enzym 22.7 1.1E+02 0.0025 20.0 3.0 36 61-96 5-40 (135)
202 cd01741 GATase1_1 Subgroup of 22.5 2.2E+02 0.0048 19.4 4.5 44 73-119 13-56 (188)
203 PRK05234 mgsA methylglyoxal sy 21.8 1.8E+02 0.0039 19.6 3.8 39 77-117 42-83 (142)
204 cd06572 Histidinol_dh Histidin 21.7 3.1E+02 0.0066 22.1 5.5 47 20-66 81-132 (390)
205 PRK03673 hypothetical protein; 21.7 1.9E+02 0.0041 23.1 4.4 49 71-119 21-70 (396)
206 PRK14545 nucleoside diphosphat 21.4 1.2E+02 0.0027 20.3 2.9 37 60-96 7-43 (139)
207 PLN02926 histidinol dehydrogen 21.3 2.7E+02 0.0058 22.7 5.2 47 20-66 109-160 (431)
208 smart00540 LEM in nuclear memb 21.3 84 0.0018 17.1 1.7 22 70-91 5-26 (44)
209 smart00115 CASc Caspase, inter 21.2 3.3E+02 0.0072 19.8 5.9 44 29-89 5-48 (241)
210 cd00595 NDPk Nucleoside diphos 21.2 1.1E+02 0.0023 20.2 2.6 37 61-97 5-41 (133)
211 PF14265 DUF4355: Domain of un 21.0 39 0.00084 22.0 0.4 27 75-101 73-99 (125)
212 PF09084 NMT1: NMT1/THI5 like; 21.0 2.6E+02 0.0057 19.1 4.7 55 56-114 91-145 (216)
213 COG4996 Predicted phosphatase 20.8 2.6E+02 0.0056 19.3 4.3 37 33-71 57-97 (164)
214 cd04416 NDPk_TX NDP kinase dom 20.8 1.4E+02 0.003 19.7 3.1 35 61-96 5-39 (132)
215 PF06871 TraH_2: TraH_2; Inte 20.5 1.3E+02 0.0028 21.8 2.9 22 57-78 39-60 (206)
216 TIGR00365 monothiol glutaredox 20.4 2.3E+02 0.0049 17.5 4.6 57 56-115 9-73 (97)
217 COG1556 Uncharacterized conser 20.4 3.5E+02 0.0076 19.9 5.2 42 58-99 152-193 (218)
218 PRK12447 histidinol dehydrogen 20.3 2.6E+02 0.0057 22.7 5.0 45 20-64 104-151 (426)
219 COG1021 EntE Peptide arylation 20.3 1.3E+02 0.0027 24.8 3.1 33 39-73 239-272 (542)
220 COG0141 HisD Histidinol dehydr 20.1 4.9E+02 0.011 21.2 6.4 46 19-64 104-152 (425)
No 1
>KOG2450|consensus
Probab=100.00 E-value=5.2e-33 Score=217.96 Aligned_cols=119 Identities=29% Similarity=0.492 Sum_probs=112.6
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
+||||+++++..+...+.+.....|++++|+|||+.|.|||||+.+..|+++||| +||+||+||++++|++++.+++++
T Consensus 129 ~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~ 208 (501)
T KOG2450|consen 129 FRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLC 208 (501)
T ss_pred HHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHh
Confidence 5899999999966555567888999999999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+++|+|+|++|+|.|.+.++++.|.+|++|+.|.||||+.
T Consensus 209 ~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~ 248 (501)
T KOG2450|consen 209 KEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTP 248 (501)
T ss_pred HHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCc
Confidence 9999999999999999999999999999999999999974
No 2
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=99.97 E-value=1.9e-31 Score=211.98 Aligned_cols=120 Identities=32% Similarity=0.522 Sum_probs=108.6
Q ss_pred ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
+++||++.+++..+...+...+...+++++|+|||++|+|||||+++.++++++|| +||+||+|||+.+|+++..++++
T Consensus 103 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~ 182 (472)
T COG1012 103 FIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAEL 182 (472)
T ss_pred HHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHH
Confidence 36899999987765432223378899999999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+.++|+|+|++|++++++.+.++.|..||+|++|.||||++
T Consensus 183 ~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~ 223 (472)
T COG1012 183 AAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTA 223 (472)
T ss_pred HHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChH
Confidence 99999999999999997777999999999999999999973
No 3
>KOG2451|consensus
Probab=99.97 E-value=7.4e-31 Score=200.63 Aligned_cols=120 Identities=30% Similarity=0.428 Sum_probs=111.0
Q ss_pred ChHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844 1 LNAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK 78 (120)
Q Consensus 1 ~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~ 78 (120)
|.+|||+++++..+.. +...+.+..+++++|+||+++|+|||||..+..++..+|| +||+||+||++++|++++.+++
T Consensus 128 f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~ 207 (503)
T KOG2451|consen 128 FFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAK 207 (503)
T ss_pred HHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHH
Confidence 6899999999997644 5567888899999999999999999999999999999999 5999999999999999999999
Q ss_pred HHHHhCCCCCcEEEEeCC---ChHHHHHHHhCCCcceEEEecCCC
Q psy1844 79 IMIEAGVPPGVVNFVPAD---GPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 79 ~l~~ag~p~g~~~~i~~~---~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+.+++|+|+|++|+|+++ ..+.++.|+.+|.++.|.||||+.
T Consensus 208 lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~ 252 (503)
T KOG2451|consen 208 LAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTN 252 (503)
T ss_pred HHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccch
Confidence 999999999999999963 447899999999999999999974
No 4
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=99.96 E-value=1.4e-29 Score=201.74 Aligned_cols=119 Identities=27% Similarity=0.435 Sum_probs=104.2
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||+..+++..+.. +...++...+++++|+|||++|+|||||+...++++++|| |||+||+|||+.+|+++..+.++
T Consensus 116 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~ 195 (482)
T PRK11241 116 IEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAEL 195 (482)
T ss_pred HHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHH
Confidence 578888877654321 2112345578899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
++++|+|+|++|++++++.+.++.|++|+++|.|+||||++
T Consensus 196 ~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~ 236 (482)
T PRK11241 196 AIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTE 236 (482)
T ss_pred HHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHH
Confidence 99999999999999997777899999999999999999963
No 5
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=99.96 E-value=2.2e-29 Score=201.37 Aligned_cols=118 Identities=27% Similarity=0.393 Sum_probs=103.9
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+.+..+...........+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 129 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~ 208 (501)
T PLN02766 129 LRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLA 208 (501)
T ss_pred HHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHH
Confidence 5788887776544221122345578899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|++|++++++.+.++.|++|+++|+|.||||+
T Consensus 209 ~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~ 247 (501)
T PLN02766 209 KLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGST 247 (501)
T ss_pred HhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 999999999999999777889999999999999999996
No 6
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=99.96 E-value=3.4e-29 Score=199.75 Aligned_cols=117 Identities=26% Similarity=0.310 Sum_probs=100.5
Q ss_pred hHHHHHHhhhcCCCC---CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS---EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY 77 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~ 77 (120)
++||++...+..+.. +....+.+.+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.
T Consensus 110 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~ 189 (489)
T cd07126 110 LENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFL 189 (489)
T ss_pred HHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHH
Confidence 678888776653311 1112345678999999999999999999999999999999 699999999999999999999
Q ss_pred HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++.++|+|+|++|+++|++.+ +..++.|+++|+|.||||+
T Consensus 190 ~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~ 230 (489)
T cd07126 190 RLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSS 230 (489)
T ss_pred HHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCH
Confidence 9999999999999999996554 5568889999999999996
No 7
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=99.96 E-value=3.9e-29 Score=201.35 Aligned_cols=118 Identities=25% Similarity=0.399 Sum_probs=104.2
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||+++.++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 166 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll 245 (538)
T PLN02466 166 FRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLL 245 (538)
T ss_pred HHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHH
Confidence 5788888777654322122334568999999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|++|++++++.+.++.|.+|+++|.|.||||+
T Consensus 246 ~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~ 284 (538)
T PLN02466 246 HEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGST 284 (538)
T ss_pred HhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence 999999999999999777788999999999999999996
No 8
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=99.96 E-value=4.1e-29 Score=198.58 Aligned_cols=118 Identities=27% Similarity=0.409 Sum_probs=103.6
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||+++.++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 112 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~ 191 (476)
T cd07142 112 FRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLA 191 (476)
T ss_pred HHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHH
Confidence 5778877766543222122335678899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|+++++++++.+.++.|.+|+++|.|+||||+
T Consensus 192 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~ 230 (476)
T cd07142 192 AEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGST 230 (476)
T ss_pred HHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcH
Confidence 999999999999999777789999999999999999996
No 9
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=99.96 E-value=7.1e-29 Score=194.30 Aligned_cols=119 Identities=27% Similarity=0.423 Sum_probs=104.6
Q ss_pred ChHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844 1 LNAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK 78 (120)
Q Consensus 1 ~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~ 78 (120)
+++||++++++..+.. ....++...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.+
T Consensus 40 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~ 119 (409)
T PRK10090 40 YIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK 119 (409)
T ss_pred HHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHH
Confidence 3678888877664322 1112344678899999999999999999999999999999 6999999999999999999999
Q ss_pred HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++++|+|+|+++++++++.+.++.|.+|+++|+|.||||+
T Consensus 120 ~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 160 (409)
T PRK10090 120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 160 (409)
T ss_pred HHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999777789999999999999999996
No 10
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=99.96 E-value=5.3e-29 Score=202.31 Aligned_cols=118 Identities=22% Similarity=0.301 Sum_probs=102.6
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++.+++..+.. .....+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus 219 ~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l 298 (604)
T PLN02419 219 VEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAEL 298 (604)
T ss_pred HHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHH
Confidence 578888887664321 1112344568899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+.++|+|+|++|+++|+ .+.++.|+.|++||+|.||||++
T Consensus 299 ~~eAGlP~GvvnvV~G~-~~~~~~L~~~~~Vd~V~FTGSt~ 338 (604)
T PLN02419 299 AMEAGLPDGVLNIVHGT-NDTVNAICDDEDIRAVSFVGSNT 338 (604)
T ss_pred HHHhCcCcceEEEEeCC-hHHHHHHHhCCCCCEEEEeCChH
Confidence 99999999999999996 46789999999999999999963
No 11
>PLN02278 succinic semialdehyde dehydrogenase
Probab=99.96 E-value=1.5e-28 Score=196.48 Aligned_cols=118 Identities=34% Similarity=0.517 Sum_probs=104.3
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++.+++..+.. +...++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++
T Consensus 130 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~ 209 (498)
T PLN02278 130 LEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAEL 209 (498)
T ss_pred HHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH
Confidence 578888887764322 2223345678889999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++.+.++.|+.|+++|+|.||||+
T Consensus 210 l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~ 249 (498)
T PLN02278 210 ALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGST 249 (498)
T ss_pred HHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcH
Confidence 9999999999999999777788999999999999999996
No 12
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=99.96 E-value=1.7e-28 Score=196.65 Aligned_cols=119 Identities=30% Similarity=0.443 Sum_probs=105.6
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+++..+.......+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~ 216 (512)
T cd07124 137 LEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEIL 216 (512)
T ss_pred HHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHH
Confidence 5788888887744222223345678999999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+++|+|+|+++++++++.+.++.|.+|+++|.|.||||++
T Consensus 217 ~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~ 256 (512)
T cd07124 217 EEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSRE 256 (512)
T ss_pred HHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchH
Confidence 9999999999999997778899999999999999999963
No 13
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=99.96 E-value=1.6e-28 Score=195.60 Aligned_cols=118 Identities=26% Similarity=0.413 Sum_probs=103.4
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
+++|++++++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+++|.++..+.+++
T Consensus 115 ~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l 194 (481)
T cd07143 115 FRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLI 194 (481)
T ss_pred HHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHH
Confidence 5778887776533221122344577899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|+++++++++.+.++.|..|+++|+|.||||+
T Consensus 195 ~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~ 233 (481)
T cd07143 195 PEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGST 233 (481)
T ss_pred HhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECch
Confidence 999999999999999777789999999999999999996
No 14
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=99.96 E-value=2.5e-28 Score=192.88 Aligned_cols=118 Identities=26% Similarity=0.394 Sum_probs=103.9
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++..++..+......++...+.+++|+||+++|+|||||+..+++.+++|| +||+||+|||+.+|+++..+.+++
T Consensus 88 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~ 167 (454)
T cd07109 88 FEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELA 167 (454)
T ss_pred HHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 4677777766644222122445678999999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|+++++++++.+.++.|++|+++|.|+||||+
T Consensus 168 ~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~ 206 (454)
T cd07109 168 EEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSV 206 (454)
T ss_pred HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCH
Confidence 999999999999999777889999999999999999996
No 15
>PLN02467 betaine aldehyde dehydrogenase
Probab=99.96 E-value=2e-28 Score=195.91 Aligned_cols=118 Identities=27% Similarity=0.463 Sum_probs=103.7
Q ss_pred hHHHHHHhhhcCCCC---CC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS---ED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~---~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++||++.+++..+.. .. +......+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+
T Consensus 118 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l 197 (503)
T PLN02467 118 FEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLEL 197 (503)
T ss_pred HHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHH
Confidence 578888887764321 11 11234578899999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++++++|+|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus 198 ~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~ 240 (503)
T PLN02467 198 ADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGST 240 (503)
T ss_pred HHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCH
Confidence 9999999999999999999777889999999999999999996
No 16
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=99.96 E-value=2.1e-28 Score=194.63 Aligned_cols=117 Identities=25% Similarity=0.413 Sum_probs=103.1
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+++..+.......+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 107 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~ 186 (479)
T cd07116 107 FRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELI 186 (479)
T ss_pred HHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 5688887776543222223445678899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++ +|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus 187 ~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~ 224 (479)
T cd07116 187 GDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGET 224 (479)
T ss_pred HHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence 998 99999999999777889999999999999999996
No 17
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=99.96 E-value=2.6e-28 Score=194.25 Aligned_cols=118 Identities=29% Similarity=0.451 Sum_probs=103.8
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++++++..+.......+...+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 115 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~ 194 (484)
T cd07144 115 IRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLV 194 (484)
T ss_pred HHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHH
Confidence 5678887777643221122344568899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|++|++++++.+.++.|..|+++|+|.||||+
T Consensus 195 ~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~ 233 (484)
T cd07144 195 KEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGST 233 (484)
T ss_pred HHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcH
Confidence 999999999999999777889999999999999999996
No 18
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=99.96 E-value=2.7e-28 Score=194.02 Aligned_cols=118 Identities=29% Similarity=0.490 Sum_probs=103.9
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++|+++.+++..+.......+...+.+++|+|||++|+|||||+...++.+++|| +||+||+|||+.+|.++..+.+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~ 184 (482)
T cd07119 105 FRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELI 184 (482)
T ss_pred HHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHH
Confidence 5678887776543222223455678999999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.++|+|+|+++++++++.+.++.|++|+++|+|+||||+
T Consensus 185 ~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~ 223 (482)
T cd07119 185 EEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGT 223 (482)
T ss_pred HHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence 999999999999999777789999999999999999996
No 19
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=99.96 E-value=2.4e-28 Score=193.65 Aligned_cols=118 Identities=27% Similarity=0.384 Sum_probs=103.7
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++|+++.+++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.+++
T Consensus 104 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~ 183 (467)
T TIGR01804 104 FEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELM 183 (467)
T ss_pred HHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHH
Confidence 5788888777644321112225578899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus 184 ~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~ 222 (467)
T TIGR01804 184 EEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGV 222 (467)
T ss_pred HHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcH
Confidence 999999999999998767889999999999999999996
No 20
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=99.96 E-value=2.3e-28 Score=196.70 Aligned_cols=118 Identities=49% Similarity=0.720 Sum_probs=103.8
Q ss_pred hHHHHHHhhhcCCCCC-CCCCCcceEEEeccC-eEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISE-DPKSTLNSLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++.+++..+... ....+...+++++|+ |||++|+|||||+....+++++||+||+||+|||+++|+++..+.++
T Consensus 139 ~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaGN~VVlKPs~~tp~~~~~l~~~ 218 (533)
T TIGR01236 139 FRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPALMGNTVIWKPSITATLSNYLTMRI 218 (533)
T ss_pred HHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHHhCCeEEEECCCcCCHHHHHHHHH
Confidence 5788887776643211 123345678889999 99999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|++|++++++.+.++.|+.|+++++|.||||+
T Consensus 219 ~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~ 258 (533)
T TIGR01236 219 LEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGST 258 (533)
T ss_pred HHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCH
Confidence 9999999999999999777889999999999999999996
No 21
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=99.96 E-value=2.5e-28 Score=193.63 Aligned_cols=117 Identities=21% Similarity=0.258 Sum_probs=99.8
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+++..............+++++|+|||++|+|||||++.+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~ 176 (462)
T PRK13968 97 CDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVF 176 (462)
T ss_pred HHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHH
Confidence 5788887776532111112345678889999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|++|++++++. ....++.|+++|.|.||||+
T Consensus 177 ~~aGlP~gv~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~ 214 (462)
T PRK13968 177 KDAGIPQGVYGWLNADND-GVSQMINDSRIAAVTVTGSV 214 (462)
T ss_pred HHcCcCcCcEEEEecCch-hhHHHhcCCCCCEEEEECCH
Confidence 999999999999998654 34568899999999999995
No 22
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=99.96 E-value=2.7e-28 Score=193.75 Aligned_cols=118 Identities=31% Similarity=0.465 Sum_probs=103.3
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++|++++.++..+.......+...+.+++|+|||++|+|||||+..+++.+++|| +||+||+|||+.+|.++..+.+++
T Consensus 112 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~ 191 (476)
T cd07091 112 LRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELI 191 (476)
T ss_pred HHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHH
Confidence 5677777666543221122445568899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus 192 ~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~ 230 (476)
T cd07091 192 KEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGST 230 (476)
T ss_pred HHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcH
Confidence 999999999999999777788999999999999999996
No 23
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=99.96 E-value=2.7e-28 Score=192.62 Aligned_cols=118 Identities=30% Similarity=0.459 Sum_probs=103.1
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|++...++..+.. +....+...+.+++|+|||++|+|||||+...++.+++|| +||+||+|||+++|+++..+.++
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~ 166 (448)
T TIGR01780 87 LEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARL 166 (448)
T ss_pred HHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHH
Confidence 567777766654422 2223455677889999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCC-ChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~-~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|++|+++++ +.+.++.|++|+++|.|.||||+
T Consensus 167 ~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~ 207 (448)
T TIGR01780 167 AEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGST 207 (448)
T ss_pred HHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999996 57788999999999999999996
No 24
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=99.96 E-value=2.5e-28 Score=196.07 Aligned_cols=118 Identities=58% Similarity=0.873 Sum_probs=103.4
Q ss_pred hHHHHHHhhhcCCC-CCCCCCCcceEEEeccC-eEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPI-SEDPKSTLNSLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++.+++.... ......+...+++++|+ ||+++|+|||||+....+++++||+||+||+|||+++|+++..+.++
T Consensus 139 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~palaGN~VVlKPs~~tp~~~~~l~~~ 218 (522)
T cd07123 139 LRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKI 218 (522)
T ss_pred HHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHH
Confidence 57788877765331 11112245678899998 99999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|++|++++++.+.++.|+.|++++.|.||||+
T Consensus 219 l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~ 258 (522)
T cd07123 219 LEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGST 258 (522)
T ss_pred HHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCH
Confidence 9999999999999999777789999999999999999996
No 25
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=99.96 E-value=2.6e-28 Score=194.65 Aligned_cols=118 Identities=25% Similarity=0.424 Sum_probs=102.9
Q ss_pred hHHHHHHhhhcCCCCCC-C---CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISED-P---KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~-~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++||++++++..+.... . ......+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.++..+
T Consensus 114 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l 193 (486)
T cd07140 114 FRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKF 193 (486)
T ss_pred HHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHH
Confidence 57888877766432211 1 1223467899999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.++++++|+|+|++|++++++.+.++.|..|++|++|.||||+
T Consensus 194 ~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~ 236 (486)
T cd07140 194 AELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGST 236 (486)
T ss_pred HHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 9999999999999999999777889999999999999999996
No 26
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=99.95 E-value=3.3e-28 Score=193.35 Aligned_cols=118 Identities=25% Similarity=0.363 Sum_probs=103.6
Q ss_pred hHHHHHHhhhcCCCCC-----CCCCCcceEEEeccC-eEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHH
Q psy1844 2 NAFFAKELTKYQPISE-----DPKSTLNSLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNY 74 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~-----~~~~~~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~ 74 (120)
++||++.+++..+... ........+++++|+ |||++|+|||||+..+++++++|| +||+||+|||+++|+++.
T Consensus 104 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~ 183 (472)
T TIGR03250 104 LTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSAL 183 (472)
T ss_pred HHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 5788888876643111 112244678999998 999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 75 TIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 75 ~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.+.++++++|+|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus 184 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~ 228 (472)
T TIGR03250 184 YLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGV 228 (472)
T ss_pred HHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 999999999999999999999777789999999999999999996
No 27
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=99.95 E-value=3.1e-28 Score=193.60 Aligned_cols=117 Identities=31% Similarity=0.489 Sum_probs=100.8
Q ss_pred hHHHHHHhhhcCCCC--CC-C---CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHH
Q psy1844 2 NAFFAKELTKYQPIS--ED-P---KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNY 74 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~--~~-~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~ 74 (120)
++||+++..+..+.. .. + ......+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++.
T Consensus 107 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~ 186 (477)
T cd07113 107 LRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLL 186 (477)
T ss_pred HHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 567777766543311 10 1 1224567899999999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 75 TIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 75 ~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.+.++++++|+|+|++|++++++. .++.|++|+++|+|.||||+
T Consensus 187 ~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~ 230 (477)
T cd07113 187 RVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSV 230 (477)
T ss_pred HHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcH
Confidence 999999999999999999999765 88999999999999999996
No 28
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=99.95 E-value=3.6e-28 Score=192.13 Aligned_cols=118 Identities=31% Similarity=0.512 Sum_probs=103.2
Q ss_pred hHHHHHHhhhcCC---CC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQP---IS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~---~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++||++.+++... .. +.+.++...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l 166 (456)
T cd07110 87 FEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELEL 166 (456)
T ss_pred HHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHH
Confidence 4677777776532 11 1122355678899999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.++++++|+|+|+++++++++.+.++.|++|+++|+|+||||+
T Consensus 167 ~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~ 209 (456)
T cd07110 167 AEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGST 209 (456)
T ss_pred HHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCH
Confidence 9999999999999999999777789999999999999999995
No 29
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=99.95 E-value=3e-28 Score=194.10 Aligned_cols=117 Identities=27% Similarity=0.420 Sum_probs=102.1
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++..++..+.......+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 113 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~ 192 (488)
T PRK13252 113 LEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIY 192 (488)
T ss_pred HHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHH
Confidence 5778877776543221112345678899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|++|++++++. .++.|..|+++|.|+||||+
T Consensus 193 ~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~ 230 (488)
T PRK13252 193 TEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGV 230 (488)
T ss_pred HHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcH
Confidence 999999999999998665 88999999999999999986
No 30
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=99.95 E-value=3.7e-28 Score=194.22 Aligned_cols=118 Identities=29% Similarity=0.485 Sum_probs=103.9
Q ss_pred hHHHHHHhhhcCCCC--CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS--EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK 78 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~ 78 (120)
++||++++.+..+.. .....+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 202 (500)
T cd07083 123 IRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFE 202 (500)
T ss_pred HHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHH
Confidence 578888887664321 1122445677889999999999999999999999999999 6999999999999999999999
Q ss_pred HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus 203 ~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~ 243 (500)
T cd07083 203 IFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSL 243 (500)
T ss_pred HHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcH
Confidence 99999999999999999777889999999999999999996
No 31
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=99.95 E-value=4.3e-28 Score=191.99 Aligned_cols=118 Identities=28% Similarity=0.361 Sum_probs=104.2
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+++..+......++...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 88 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~ 167 (455)
T cd07120 88 LRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRIL 167 (455)
T ss_pred HHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHH
Confidence 5788888877644222122345678899999999999999999999999999999 699999999999999999999999
Q ss_pred HH-hCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IE-AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~-ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++ +|+|+|+++++++++.+.++.|++|++++.|.||||+
T Consensus 168 ~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~ 207 (455)
T cd07120 168 AEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGST 207 (455)
T ss_pred HHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCH
Confidence 99 6999999999999777789999999999999999996
No 32
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=99.95 E-value=4.1e-28 Score=193.09 Aligned_cols=118 Identities=29% Similarity=0.490 Sum_probs=103.4
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++..++..+...........+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 116 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l 195 (481)
T cd07141 116 LRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLI 195 (481)
T ss_pred HHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHH
Confidence 4677777776644221112334578899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus 196 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~ 234 (481)
T cd07141 196 KEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGST 234 (481)
T ss_pred HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 999999999999999777788999999999999999996
No 33
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=99.95 E-value=4.8e-28 Score=194.14 Aligned_cols=119 Identities=28% Similarity=0.406 Sum_probs=103.8
Q ss_pred hHHHHHHhhhcC-CCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQ-PISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++.+++.. +.......+...+.+++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus 141 ~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~ 220 (514)
T PRK03137 141 LEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEV 220 (514)
T ss_pred HHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH
Confidence 578888877653 2111122344568899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
++++|+|+|++|++++++.+.++.|++|++++.|.||||++
T Consensus 221 l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~ 261 (514)
T PRK03137 221 LEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSRE 261 (514)
T ss_pred HHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcH
Confidence 99999999999999997778899999999999999999973
No 34
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.95 E-value=5.2e-28 Score=193.18 Aligned_cols=118 Identities=31% Similarity=0.429 Sum_probs=104.0
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+++..+.......+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..+.+++
T Consensus 128 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~ 207 (494)
T PRK09847 128 IRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLA 207 (494)
T ss_pred HHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHH
Confidence 5788888877644221112334568899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|++|++++++.+.++.|..|+++|.|.||||+
T Consensus 208 ~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~ 246 (494)
T PRK09847 208 KEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGST 246 (494)
T ss_pred HHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCH
Confidence 999999999999999777889999999999999999995
No 35
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=99.95 E-value=4e-28 Score=194.44 Aligned_cols=118 Identities=28% Similarity=0.460 Sum_probs=103.8
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++.+++..+.. .....+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus 137 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~ 216 (511)
T TIGR01237 137 CEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEI 216 (511)
T ss_pred HHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH
Confidence 578888887764321 1112344567889999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|++|++++++.+.++.|..|++++.|.||||+
T Consensus 217 ~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~ 256 (511)
T TIGR01237 217 LIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSR 256 (511)
T ss_pred HHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECch
Confidence 9999999999999999777889999999999999999996
No 36
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=99.95 E-value=4.8e-28 Score=193.98 Aligned_cols=117 Identities=19% Similarity=0.276 Sum_probs=100.3
Q ss_pred hHHHHHHhhhcCCC-CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH----
Q psy1844 2 NAFFAKELTKYQPI-SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT---- 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~---- 75 (120)
++||++.+++..+- .+...+....+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..
T Consensus 124 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l 203 (508)
T PLN02315 124 CDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKL 203 (508)
T ss_pred HHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHH
Confidence 57888877765432 12122334557789999999999999999999999999999 6999999999999999887
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++++++|+|+|++|++++ +.+.++.|..|+++|+|.||||+
T Consensus 204 ~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~ 246 (508)
T PLN02315 204 VAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSS 246 (508)
T ss_pred HHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCH
Confidence 67888999999999999998 67789999999999999999996
No 37
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=99.95 E-value=5e-28 Score=191.43 Aligned_cols=118 Identities=29% Similarity=0.403 Sum_probs=102.2
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|+++..++..+.. .....+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..+.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~ 168 (454)
T cd07118 89 WRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAEL 168 (454)
T ss_pred HHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHH
Confidence 567777665554322 1112334567899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus 169 ~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~ 208 (454)
T cd07118 169 LIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGST 208 (454)
T ss_pred HHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcH
Confidence 9999999999999999777789999999999999999996
No 38
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=99.95 E-value=4.9e-28 Score=192.24 Aligned_cols=118 Identities=27% Similarity=0.490 Sum_probs=103.9
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++..++..+.. ....++...+..++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus 105 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~ 184 (473)
T cd07097 105 FRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEI 184 (473)
T ss_pred HHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHH
Confidence 578887777664321 1122345678999999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++|+|+|++|++++++.+.++.|.+|+++|.|.||||+
T Consensus 185 ~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~ 224 (473)
T cd07097 185 LEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGST 224 (473)
T ss_pred HHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcH
Confidence 9999999999999999777789999999999999999996
No 39
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=99.95 E-value=4.3e-28 Score=192.13 Aligned_cols=118 Identities=30% Similarity=0.460 Sum_probs=103.7
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+++|+++..+.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~ 174 (462)
T cd07112 95 FRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELA 174 (462)
T ss_pred HHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHH
Confidence 5678887776643221122345677899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus 175 ~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~ 213 (462)
T cd07112 175 LEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGST 213 (462)
T ss_pred HhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCH
Confidence 999999999999999777889999999999999999996
No 40
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.95 E-value=5.4e-28 Score=191.50 Aligned_cols=117 Identities=21% Similarity=0.226 Sum_probs=100.4
Q ss_pred hHHHHHHhhhcCCCC-C--CCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-E--DPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY 77 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~--~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~ 77 (120)
++||++.+++..... . ...+....+++++|+|||++|+|||||++..++++++|| +||+||+|||+.+|+++..+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~ 170 (457)
T PRK09406 91 FRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLA 170 (457)
T ss_pred HHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHH
Confidence 578888877653211 1 111334678899999999999999999999999999999 699999999999999999999
Q ss_pred HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++.++|+|+|+++++++ +.+.+..|+.|+++++|.||||+
T Consensus 171 ~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~ 211 (457)
T PRK09406 171 DLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSE 211 (457)
T ss_pred HHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcH
Confidence 999999999999999986 34567889999999999999996
No 41
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=99.95 E-value=5.8e-28 Score=190.81 Aligned_cols=118 Identities=31% Similarity=0.459 Sum_probs=103.4
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++++++..+.......+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.+++
T Consensus 88 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~ 167 (453)
T cd07115 88 FRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELM 167 (453)
T ss_pred HHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHH
Confidence 4677777766543221123445678999999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|+++++++++.+.++.|..|+++|+|+||||+
T Consensus 168 ~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~ 206 (453)
T cd07115 168 AEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGST 206 (453)
T ss_pred HhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcH
Confidence 999999999999999777788999999999999999996
No 42
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=99.95 E-value=8.2e-28 Score=191.71 Aligned_cols=116 Identities=28% Similarity=0.412 Sum_probs=98.6
Q ss_pred HHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH
Q psy1844 3 AFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI 81 (120)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~ 81 (120)
+|+++...+..+......++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~ 185 (487)
T PRK09457 106 AISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQ 185 (487)
T ss_pred HHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH
Confidence 455555544322111112344568889999999999999999999999999999 6999999999999999999999999
Q ss_pred HhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 82 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 82 ~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++|+|+|+++++++ +.+.++.|++|+++|.|.||||+
T Consensus 186 ~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~ 222 (487)
T PRK09457 186 QAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSA 222 (487)
T ss_pred HhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCH
Confidence 99999999999998 56789999999999999999996
No 43
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=99.95 E-value=6.9e-28 Score=191.58 Aligned_cols=117 Identities=26% Similarity=0.428 Sum_probs=101.2
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++..++..+.. .....+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++
T Consensus 107 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l 186 (472)
T TIGR03374 107 FRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAEL 186 (472)
T ss_pred HHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHH
Confidence 567777766554321 1112344578899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++. +|+|++|++++++.+.++.|+.|+++|+|.||||+
T Consensus 187 ~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~ 225 (472)
T TIGR03374 187 AKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSI 225 (472)
T ss_pred HHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence 9985 99999999999777889999999999999999996
No 44
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=99.95 E-value=7.9e-28 Score=189.77 Aligned_cols=118 Identities=31% Similarity=0.430 Sum_probs=103.2
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++++++.+++..+.. +....+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++
T Consensus 89 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~ 168 (451)
T cd07150 89 LRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEI 168 (451)
T ss_pred HHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHH
Confidence 567777776654322 2122445678899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus 169 ~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 208 (451)
T cd07150 169 MEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGST 208 (451)
T ss_pred HHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcH
Confidence 9999999999999999777889999999999999999996
No 45
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=99.95 E-value=6.8e-28 Score=191.89 Aligned_cols=117 Identities=26% Similarity=0.434 Sum_probs=102.8
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+++..+.....+.+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 107 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~ 186 (480)
T cd07559 107 FRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELI 186 (480)
T ss_pred HHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHH
Confidence 5678887776543221123455678899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++ +|+|++|++++++.+.++.|++|+++|.|.||||+
T Consensus 187 ~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~ 224 (480)
T cd07559 187 GDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGST 224 (480)
T ss_pred HHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 996 99999999999777889999999999999999996
No 46
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=99.95 E-value=7.9e-28 Score=190.17 Aligned_cols=118 Identities=35% Similarity=0.473 Sum_probs=102.1
Q ss_pred hHHHHHHhhhcCCCCCCCC-----CCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPK-----STLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++||++.+++..+.....+ .....+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..
T Consensus 89 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~ 168 (456)
T cd07145 89 FKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIE 168 (456)
T ss_pred HHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 5677777665543211111 234567889999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++++++|+|+|+++++++++.+.++.|++|++++.|.||||+
T Consensus 169 l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~ 212 (456)
T cd07145 169 LAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGST 212 (456)
T ss_pred HHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999777889999999999999999996
No 47
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.95 E-value=9.4e-28 Score=189.92 Aligned_cols=117 Identities=26% Similarity=0.325 Sum_probs=101.4
Q ss_pred hHHHHHHhhhcCCCC-C-C---CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-E-D---PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~-~---~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++||++.+.+..+.. . . ..++...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|+++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 169 (455)
T cd07148 90 VELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLA 169 (455)
T ss_pred HHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHH
Confidence 467777777653311 1 1 12345678999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++++++|+|+|++++++++ .+.++.|+.|+++|.|.||||+
T Consensus 170 l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~ 212 (455)
T cd07148 170 FVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSA 212 (455)
T ss_pred HHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCH
Confidence 999999999999999999985 4678999999999999999996
No 48
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=99.95 E-value=1.1e-27 Score=188.64 Aligned_cols=117 Identities=28% Similarity=0.406 Sum_probs=101.2
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++|+++...+..+....+.++...+.+++|+|||++|+|||||++.+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~ 147 (431)
T cd07095 68 IDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELW 147 (431)
T ss_pred HHHHHHHHHHhcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHH
Confidence 4566666655533221123455678899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.++|+|+|++++++++ .+.++.|.+|+++|.|.||||+
T Consensus 148 ~~ag~P~g~~~~v~g~-~~~~~~l~~~~~v~~v~ftGs~ 185 (431)
T cd07095 148 EEAGLPPGVLNLVQGG-RETGEALAAHEGIDGLLFTGSA 185 (431)
T ss_pred HHhCcChhHheEEeCc-HHHHHHHhcCCCCCEEEEECcH
Confidence 9999999999999984 5688999999999999999996
No 49
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=99.95 E-value=1.2e-27 Score=188.81 Aligned_cols=98 Identities=15% Similarity=0.192 Sum_probs=91.1
Q ss_pred CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeCC
Q psy1844 22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPAD 96 (120)
Q Consensus 22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~~ 96 (120)
....+++++|+|||++|+|||||+..+++++++|| +||+||+|||+++|+++..+.++++ ++|+|+|++|++++.
T Consensus 86 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~ 165 (439)
T cd07081 86 NGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNP 165 (439)
T ss_pred CCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCC
Confidence 34578999999999999999999999999999999 6999999999999999988888875 679999999999987
Q ss_pred ChHHHHHHHhCCCcceEEEecCC
Q psy1844 97 GPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 97 ~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.+.++.|++|++|++|.||||+
T Consensus 166 ~~~~g~~L~~~~~V~~V~FTGs~ 188 (439)
T cd07081 166 SIELAQRLMKFPGIGLLLATGGP 188 (439)
T ss_pred CHHHHHHHHcCCCCCEEEEECCH
Confidence 77789999999999999999996
No 50
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=99.95 E-value=1.4e-27 Score=189.10 Aligned_cols=118 Identities=30% Similarity=0.437 Sum_probs=103.6
Q ss_pred hHHHHHHhhhcCCCC--CCC---CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS--EDP---KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~--~~~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++||++.+++..... ... ..+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~ 168 (459)
T cd07089 89 LRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALL 168 (459)
T ss_pred HHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 578888877653211 111 1345678999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++++++|+|+|+++++++++.+.++.|.+|++++.|.||||+
T Consensus 169 l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~ 212 (459)
T cd07089 169 LGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGST 212 (459)
T ss_pred HHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999777789999999999999999996
No 51
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=99.95 E-value=1.3e-27 Score=190.07 Aligned_cols=117 Identities=31% Similarity=0.439 Sum_probs=101.9
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+++..+.......+...+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..+.+++
T Consensus 107 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~ 186 (475)
T cd07117 107 FRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKII 186 (475)
T ss_pred HHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHH
Confidence 5678877776544221112344578899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++ +|+|++|++++++.+.++.|..|+++|.|.||||+
T Consensus 187 ~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~ 224 (475)
T cd07117 187 QDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGST 224 (475)
T ss_pred HHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence 986 99999999999777889999999999999999996
No 52
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=99.95 E-value=1.5e-27 Score=189.04 Aligned_cols=118 Identities=30% Similarity=0.404 Sum_probs=101.7
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHH-HHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSN-YTIYK 78 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~-~~~~~ 78 (120)
++||++..++..+.. ....++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++ ..+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~ 179 (465)
T cd07151 100 TREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAK 179 (465)
T ss_pred HHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHH
Confidence 467777666554322 1112355578889999999999999999999999999999 69999999999999996 68999
Q ss_pred HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++++|+|+|++|++++++.+.++.|++|+.++.|.||||+
T Consensus 180 ~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~ 220 (465)
T cd07151 180 IFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGST 220 (465)
T ss_pred HHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCH
Confidence 99999999999999998777788999999999999999996
No 53
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=99.95 E-value=1.9e-27 Score=188.90 Aligned_cols=118 Identities=28% Similarity=0.471 Sum_probs=103.4
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|+++.+++..+.. .....+...+.+++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~ 184 (478)
T cd07131 105 AQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVEL 184 (478)
T ss_pred HHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHH
Confidence 467777777654322 1122344678999999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus 185 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~ 224 (478)
T cd07131 185 FAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGST 224 (478)
T ss_pred HHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 9999999999999999777789999999999999999996
No 54
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=99.95 E-value=1.7e-27 Score=189.73 Aligned_cols=117 Identities=28% Similarity=0.404 Sum_probs=100.9
Q ss_pred hHHHHHHhhh-cCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTK-YQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++.+.+ ..+.... .+....+.+++|+|||++|+|||||+...++.+++|| +||+||+|||+.+|.++..+.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~ 184 (488)
T TIGR02299 106 FRFFADKCEEAMDGRTYP-VDTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEI 184 (488)
T ss_pred HHHHHHhHHHhcCCcccc-CCCceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHH
Confidence 4677777662 2222111 2234568889999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++.+.++.|..|+.+|.|.||||+
T Consensus 185 ~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~ 224 (488)
T TIGR02299 185 AKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGET 224 (488)
T ss_pred HHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcH
Confidence 9999999999999999777788999999999999999986
No 55
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=99.95 E-value=1.4e-27 Score=188.05 Aligned_cols=96 Identities=20% Similarity=0.155 Sum_probs=89.8
Q ss_pred ceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeCCCh
Q psy1844 24 NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPADGP 98 (120)
Q Consensus 24 ~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~~~~ 98 (120)
..+++++|+|||++|+|||||+..+++++++|| +||+||+|||+++|+++..++++++ ++|+|+|++|++++++.
T Consensus 90 ~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~ 169 (429)
T cd07121 90 LTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTI 169 (429)
T ss_pred ceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCCh
Confidence 457888999999999999999999999999999 6999999999999999999998885 78999999999998767
Q ss_pred HHHHHHHhCCCcceEEEecCC
Q psy1844 99 VFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 99 ~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++.|++|++||.|.||||+
T Consensus 170 ~~~~~L~~~~~v~~I~fTGs~ 190 (429)
T cd07121 170 ETTNELMAHPDINLLVVTGGP 190 (429)
T ss_pred HHHHHHHcCCCccEEEeeCCH
Confidence 789999999999999999996
No 56
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=99.95 E-value=2.2e-27 Score=189.09 Aligned_cols=116 Identities=31% Similarity=0.429 Sum_probs=98.4
Q ss_pred HHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH
Q psy1844 3 AFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI 81 (120)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~ 81 (120)
+|+++...+..+......+....+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++++
T Consensus 104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~ 183 (484)
T TIGR03240 104 AISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWE 183 (484)
T ss_pred HHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHH
Confidence 445555544432111112334567888999999999999999999999999999 6999999999999999999999999
Q ss_pred HhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 82 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 82 ~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++|+|+|++|++++ +.+.++.|++|+++|.|.||||+
T Consensus 184 ~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~ 220 (484)
T TIGR03240 184 KAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSS 220 (484)
T ss_pred HhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCH
Confidence 99999999999998 56789999999999999999996
No 57
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=99.95 E-value=2.2e-27 Score=186.61 Aligned_cols=117 Identities=23% Similarity=0.278 Sum_probs=100.8
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++.+++.......+.+....+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l 146 (429)
T cd07100 67 CRYYAENAEAFLADEPIETDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELF 146 (429)
T ss_pred HHHHHHHHHHhcCCeeccCCCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH
Confidence 4678877776532111112245578899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|+++++++++ +.+..|++|++++.|.||||+
T Consensus 147 ~~aglP~gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs~ 184 (429)
T cd07100 147 REAGFPEGVFQNLLIDS-DQVEAIIADPRVRGVTLTGSE 184 (429)
T ss_pred HHcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcH
Confidence 99999999999999965 567899999999999999996
No 58
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=99.95 E-value=2e-27 Score=188.40 Aligned_cols=114 Identities=36% Similarity=0.520 Sum_probs=99.9
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++|+++.+++.... ......+.+++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 105 ~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~ 180 (466)
T cd07138 105 LRAAADALKDFEFE----ERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEIL 180 (466)
T ss_pred HHHHHHhhhhcccc----ccCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHH
Confidence 45666666554321 1123467789999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|+++++++++.+.++.|++|++++.|.||||+
T Consensus 181 ~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~ 219 (466)
T cd07138 181 DEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGST 219 (466)
T ss_pred HHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcH
Confidence 999999999999999777789999999999999999996
No 59
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=99.95 E-value=3e-27 Score=188.10 Aligned_cols=118 Identities=29% Similarity=0.379 Sum_probs=100.4
Q ss_pred hHHHHHHhhhcCCCCC--C-C-CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISE--D-P-KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~--~-~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++||++.+++..+... . + ..+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l 185 (481)
T TIGR03216 106 FRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLL 185 (481)
T ss_pred HHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 4677777765533211 1 1 1134567889999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCCh-HHHHHHHhCCCcceEEEecCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGP-VFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~-~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.+++.++|+|+|+++++++++. +.++.|..|+++|.|+||||+
T Consensus 186 ~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~ 229 (481)
T TIGR03216 186 GEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGET 229 (481)
T ss_pred HHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCH
Confidence 9999999999999999998654 478889999999999999996
No 60
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=99.95 E-value=2.5e-27 Score=187.75 Aligned_cols=118 Identities=29% Similarity=0.452 Sum_probs=102.8
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|+++.+++..+.. .....+...+.+++|+||+++|+|||||+..+++.+++|| +||+||+|||+.+|.++..+.++
T Consensus 103 l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~ 182 (468)
T cd07088 103 IDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAEL 182 (468)
T ss_pred HHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHH
Confidence 467777776654322 2122345678889999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus 183 ~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 222 (468)
T cd07088 183 VDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGST 222 (468)
T ss_pred HHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 9999999999999999777788999999999999999995
No 61
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=99.95 E-value=2.7e-27 Score=187.14 Aligned_cols=118 Identities=26% Similarity=0.382 Sum_probs=102.9
Q ss_pred hHHHHHHhhhcCCCC-CC----CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-ED----PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~----~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++||++...+..+.. .. ...+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|+++..
T Consensus 86 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~ 165 (451)
T cd07146 86 LRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIY 165 (451)
T ss_pred HHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHH
Confidence 577887776553211 11 11345678899999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus 166 l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~ 209 (451)
T cd07146 166 LADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGV 209 (451)
T ss_pred HHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999777789999999999999999986
No 62
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.95 E-value=2.1e-27 Score=202.08 Aligned_cols=119 Identities=27% Similarity=0.400 Sum_probs=105.9
Q ss_pred ChHHHHHHhhhcCC--CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844 1 LNAFFAKELTKYQP--ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY 77 (120)
Q Consensus 1 ~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~ 77 (120)
|++||++.+++..+ ...+...+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.
T Consensus 652 ~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~ 731 (1038)
T PRK11904 652 FCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAV 731 (1038)
T ss_pred HHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHH
Confidence 68999999987642 121222345567788999999999999999999999999999 699999999999999999999
Q ss_pred HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++++|+|+|++|++++++.+.++.|+.|+++++|.||||+
T Consensus 732 ~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~ 773 (1038)
T PRK11904 732 KLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGST 773 (1038)
T ss_pred HHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCH
Confidence 999999999999999999888899999999999999999996
No 63
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=99.95 E-value=3.2e-27 Score=185.72 Aligned_cols=118 Identities=27% Similarity=0.355 Sum_probs=101.4
Q ss_pred hHHHHHHhhhcCC-CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQP-ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++..++... ..+....+...+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus 68 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~ 147 (432)
T cd07105 68 LREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRV 147 (432)
T ss_pred HHHHHHHHHHhcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHH
Confidence 5778887776422 112112345678899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCC---hHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADG---PVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~---~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|++|+++++. .+.++.|++|+++|.|.||||+
T Consensus 148 ~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~ 190 (432)
T cd07105 148 FHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGST 190 (432)
T ss_pred HHHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCH
Confidence 999999999999999842 3578999999999999999996
No 64
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=99.95 E-value=3.5e-27 Score=186.59 Aligned_cols=117 Identities=27% Similarity=0.401 Sum_probs=101.1
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++|+++...+..+...........+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus 87 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~ 166 (456)
T cd07107 87 LDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELA 166 (456)
T ss_pred HHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHH
Confidence 4677766655544222122345678899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++ +|+|++|++++++.+.++.|++|+++++|.||||+
T Consensus 167 ~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~ 204 (456)
T cd07107 167 REV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSV 204 (456)
T ss_pred HHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcH
Confidence 996 99999999999777788999999999999999986
No 65
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=99.95 E-value=4.2e-27 Score=187.16 Aligned_cols=117 Identities=28% Similarity=0.464 Sum_probs=101.8
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++.+++..+-. ....++...+++++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|.++..+.++
T Consensus 103 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~ 182 (478)
T cd07086 103 CDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKI 182 (478)
T ss_pred HHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHH
Confidence 467888777764321 1122344678899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHh----CCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~a----g~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++ |+|+|+++++++++. .++.|..|+++|.|.||||+
T Consensus 183 ~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~ 225 (478)
T cd07086 183 LAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGST 225 (478)
T ss_pred HHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcH
Confidence 9999 999999999998654 88999999999999999996
No 66
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=99.95 E-value=3.6e-27 Score=186.48 Aligned_cols=118 Identities=33% Similarity=0.473 Sum_probs=102.3
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
+++|+...++..+.. +....+...+.+++|+||+++|+|||||+..+++.+++|| +||+||+|||+++|+++..+.++
T Consensus 89 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~ 168 (457)
T cd07114 89 YRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKL 168 (457)
T ss_pred HHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHH
Confidence 567776666553322 1111345578899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++.+.++.|.+|+++++|.||||+
T Consensus 169 l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~ 208 (457)
T cd07114 169 AEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGT 208 (457)
T ss_pred HHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCH
Confidence 9999999999999999777788999999999999999986
No 67
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=99.95 E-value=3.9e-27 Score=187.77 Aligned_cols=116 Identities=18% Similarity=0.155 Sum_probs=97.2
Q ss_pred hHHHHHHhhhcCC----CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQP----ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~----~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++|+++.+++... ...........++.++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l 158 (484)
T PLN02174 79 IKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALL 158 (484)
T ss_pred HHHHHHHHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH
Confidence 5678887775432 111112234578999999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
++++++ ++|+|++|+++|. .+.+..+.+ +.+|+|+||||++
T Consensus 159 ~~l~~~-~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~ 199 (484)
T PLN02174 159 AKLLEQ-YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSK 199 (484)
T ss_pred HHHHHH-hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChH
Confidence 999999 6999999999984 445677775 8899999999973
No 68
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=99.95 E-value=2.9e-27 Score=187.01 Aligned_cols=117 Identities=26% Similarity=0.390 Sum_probs=102.2
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++||++..++..+.......+...+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+++|.++..+.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~ 166 (457)
T cd07090 87 LEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEIL 166 (457)
T ss_pred HHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHH
Confidence 5678877776543221112356678899999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.++|+|+|+++++++++ +.++.|+.|+++|+|.||||+
T Consensus 167 ~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~ 204 (457)
T cd07090 167 TEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSV 204 (457)
T ss_pred HHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcH
Confidence 99999999999999854 588999999999999999996
No 69
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=99.95 E-value=3.9e-27 Score=187.08 Aligned_cols=98 Identities=20% Similarity=0.141 Sum_probs=90.6
Q ss_pred cceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeCCC
Q psy1844 23 LNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPADG 97 (120)
Q Consensus 23 ~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~~~ 97 (120)
...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..++++++ ++|+|+|+++++++.+
T Consensus 121 ~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~ 200 (465)
T PRK15398 121 GLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPT 200 (465)
T ss_pred ceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCC
Confidence 4567888999999999999999999999999999 6999999999999999999999877 5899999999999866
Q ss_pred hHHHHHHHhCCCcceEEEecCCC
Q psy1844 98 PVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 98 ~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
.+.++.|++|+++|+|+||||++
T Consensus 201 ~~~~~~L~~~~~vd~I~fTGS~~ 223 (465)
T PRK15398 201 IETAQRLMKHPGIALLVVTGGPA 223 (465)
T ss_pred HHHHHHHHcCCCccEEEeeCCHH
Confidence 77889999999999999999963
No 70
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=99.95 E-value=3.9e-27 Score=185.66 Aligned_cols=117 Identities=33% Similarity=0.423 Sum_probs=98.9
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHH-HHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSN-YTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~-~~~~~~ 79 (120)
++|+++..++..+.......+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+++|.++ ..+.++
T Consensus 81 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~ 160 (443)
T cd07152 81 LHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARL 160 (443)
T ss_pred HHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHH
Confidence 4566665544332221122345568899999999999999999999999999999 69999999999999996 789999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|++|++++ +.+.++.|..|+++|.|.||||+
T Consensus 161 ~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~ 199 (443)
T cd07152 161 FEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGST 199 (443)
T ss_pred HHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCH
Confidence 9999999999999998 45688999999999999999996
No 71
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.95 E-value=1.9e-27 Score=204.92 Aligned_cols=109 Identities=31% Similarity=0.458 Sum_probs=99.8
Q ss_pred ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
|++||++++++... ...++|+|||++|+|||||+...++++++|| +||+||+|||+++|+++..+.++
T Consensus 749 flryyA~~a~~~~~-----------~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~l 817 (1318)
T PRK11809 749 FLRYYAGQVRDDFD-----------NDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRI 817 (1318)
T ss_pred HHHHHHHHHHHhcC-----------CceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHH
Confidence 68999988875311 2357899999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
++++|+|+|++|+++|++.+.++.|+.|++|++|.||||++
T Consensus 818 l~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~ 858 (1318)
T PRK11809 818 LLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTE 858 (1318)
T ss_pred HHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHH
Confidence 99999999999999998888899999999999999999963
No 72
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=99.94 E-value=5.3e-27 Score=185.26 Aligned_cols=118 Identities=32% Similarity=0.455 Sum_probs=103.3
Q ss_pred hHHHHHHhhhcCCCC--CC---CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS--ED---PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~--~~---~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++||++.+++..+.. .. ...+...+++++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|+++..
T Consensus 89 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~ 168 (453)
T cd07094 89 LRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALE 168 (453)
T ss_pred HHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 567788777664321 11 11355678889999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus 169 l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~ 212 (453)
T cd07094 169 LAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSA 212 (453)
T ss_pred HHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999777789999999999999999996
No 73
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=99.94 E-value=3.4e-27 Score=190.27 Aligned_cols=118 Identities=22% Similarity=0.273 Sum_probs=96.8
Q ss_pred hHHHHHHhhhcCCCC----CCCCCCc---ceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHH
Q psy1844 2 NAFFAKELTKYQPIS----EDPKSTL---NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSN 73 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~----~~~~~~~---~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~ 73 (120)
++||++++.+..+.. +...... ..+..++|+||+++|+|||||++..++++++|| +||+||+|||+.+|+++
T Consensus 157 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~ 236 (551)
T TIGR02288 157 VAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPL 236 (551)
T ss_pred HHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhH
Confidence 467777776653311 1111111 123478999999999999999999999999999 69999999999999976
Q ss_pred H----HHHHHHHHhCCCCCcEEEEeCC-ChHHHHHHHhCCCcceEEEecCC
Q psy1844 74 Y----TIYKIMIEAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 74 ~----~~~~~l~~ag~p~g~~~~i~~~-~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
. .+.+++.++|+|+|++|+++++ +.+.++.|+.|++++.|.||||+
T Consensus 237 ~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt 287 (551)
T TIGR02288 237 ALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSN 287 (551)
T ss_pred HHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCH
Confidence 5 5779999999999999999985 67789999999999999999997
No 74
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=99.94 E-value=8e-27 Score=182.97 Aligned_cols=118 Identities=32% Similarity=0.436 Sum_probs=101.5
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHH-HHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLS-NYTIYK 78 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~-~~~~~~ 78 (120)
++++++..++..+.. .....+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.+ +..+.+
T Consensus 68 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~ 147 (431)
T cd07104 68 LREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAE 147 (431)
T ss_pred HHHHHHHHHHhcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHH
Confidence 456777666553322 2122455678899999999999999999999999999999 6999999999999998 568999
Q ss_pred HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus 148 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~ 188 (431)
T cd07104 148 IFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGST 188 (431)
T ss_pred HHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999777788999999999999999996
No 75
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=99.94 E-value=6.3e-27 Score=185.69 Aligned_cols=117 Identities=32% Similarity=0.465 Sum_probs=101.3
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++..++..... .....+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~ 186 (471)
T cd07139 107 LRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEA 186 (471)
T ss_pred HHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHH
Confidence 577887776653211 1112345578899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++ +.+.++.|..|++++.|.||||+
T Consensus 187 ~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~ 225 (471)
T cd07139 187 AEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGST 225 (471)
T ss_pred HHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcH
Confidence 9999999999999998 45688999999999999999996
No 76
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=99.94 E-value=1e-26 Score=184.89 Aligned_cols=117 Identities=23% Similarity=0.366 Sum_probs=97.0
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|+++..++..+.. +...++...+..++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l 181 (474)
T cd07130 102 CDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKI 181 (474)
T ss_pred HHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHH
Confidence 456666655543321 2122344567888999999999999999999999999999 69999999999999999887766
Q ss_pred H----HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 M----IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l----~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+ +++|+|+|++++++++ .+.++.|++|+++|+|.||||+
T Consensus 182 ~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~ 224 (474)
T cd07130 182 VARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGST 224 (474)
T ss_pred HHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECch
Confidence 4 6889999999999985 4578999999999999999996
No 77
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=99.94 E-value=4e-27 Score=185.73 Aligned_cols=99 Identities=19% Similarity=0.231 Sum_probs=91.6
Q ss_pred CCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeC
Q psy1844 21 STLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPA 95 (120)
Q Consensus 21 ~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~ 95 (120)
.+.+.+++++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.++++ ++|+|+|+++++++
T Consensus 85 ~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g 164 (436)
T cd07122 85 EEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEE 164 (436)
T ss_pred CCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecC
Confidence 345678999999999999999999999999999999 6999999999999999999888865 78999999999998
Q ss_pred CChHHHHHHHhCCCcceEEEecCC
Q psy1844 96 DGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 96 ~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.+.+.++.|++|+++|.|.||||+
T Consensus 165 ~~~~~~~~l~~~~~v~~v~ftGs~ 188 (436)
T cd07122 165 PSIELTQELMKHPDVDLILATGGP 188 (436)
T ss_pred CChHHHHHHHcCCCcCEEEEcCCH
Confidence 777789999999999999999996
No 78
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.94 E-value=1.1e-26 Score=184.64 Aligned_cols=117 Identities=27% Similarity=0.485 Sum_probs=101.2
Q ss_pred hHHHHHHhhhcCCCCC-CCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISE-DPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
+++|++.+++..+... ....+...+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++
T Consensus 108 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~ 187 (475)
T PRK13473 108 FRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAEL 187 (475)
T ss_pred HHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHH
Confidence 4567766665543211 112344568899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++ +|+|++|++++++.+.++.|.+|+++|.|.||||+
T Consensus 188 ~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~ 226 (475)
T PRK13473 188 AADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSI 226 (475)
T ss_pred HHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 9999 99999999999777889999999999999999996
No 79
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=99.94 E-value=8.8e-27 Score=183.99 Aligned_cols=118 Identities=31% Similarity=0.454 Sum_probs=102.5
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
+++|++.+.+..+.......+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l 167 (455)
T cd07093 88 FRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELA 167 (455)
T ss_pred HHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHH
Confidence 4567776665433222122355678889999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus 168 ~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~ 206 (455)
T cd07093 168 NEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGET 206 (455)
T ss_pred HhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCH
Confidence 999999999999999777888999999999999999996
No 80
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=99.94 E-value=9.8e-27 Score=185.00 Aligned_cols=117 Identities=25% Similarity=0.393 Sum_probs=99.3
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|+++..++..+-. ....++...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++
T Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~ 185 (478)
T cd07085 106 VEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAEL 185 (478)
T ss_pred HHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHH
Confidence 356665554443311 1112345578999999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|++++++++ .+.++.|++|+++|.|.||||+
T Consensus 186 l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~ 224 (478)
T cd07085 186 LQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGST 224 (478)
T ss_pred HHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999984 5678999999999999999996
No 81
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=99.94 E-value=8.6e-27 Score=183.94 Aligned_cols=117 Identities=25% Similarity=0.345 Sum_probs=101.1
Q ss_pred hHHHHHHhhhcCC-CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQP-ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|+++.+++... .......+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|+++..+.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~ 165 (452)
T cd07102 86 ARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAA 165 (452)
T ss_pred HHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH
Confidence 4567776665422 122223444567899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++ +.++.|++|+++|.|.||||+
T Consensus 166 l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~ 204 (452)
T cd07102 166 FAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSV 204 (452)
T ss_pred HHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcH
Confidence 999999999999999976 789999999999999999996
No 82
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=99.94 E-value=1.2e-26 Score=184.48 Aligned_cols=117 Identities=23% Similarity=0.347 Sum_probs=99.5
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|++....+..+-. ....++...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.++
T Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~ 185 (477)
T TIGR01722 106 VEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAEL 185 (477)
T ss_pred HHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHH
Confidence 356666555543321 1122344568899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|++++++++ .+.++.|+.|++++.|.||||+
T Consensus 186 l~~aglP~g~~~~v~g~-~~~~~~L~~~~~v~~V~ftGS~ 224 (477)
T TIGR01722 186 FSEAGAPDGVLNVVHGD-KEAVDRLLEHPDVKAVSFVGST 224 (477)
T ss_pred HHHhCcCCCeEEEEeCC-HHHHHHHHcCCCcCEEEEECCH
Confidence 99999999999999984 5678899999999999999996
No 83
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=99.94 E-value=1.2e-26 Score=182.98 Aligned_cols=118 Identities=33% Similarity=0.502 Sum_probs=102.4
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|++...++..+.. +...++...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..+.++
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~ 166 (451)
T cd07103 87 LEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAEL 166 (451)
T ss_pred HHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHH
Confidence 466766666543322 2223456678899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++.+.++.|.+|+++|.|+||||+
T Consensus 167 l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~ 206 (451)
T cd07103 167 AEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGST 206 (451)
T ss_pred HHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCH
Confidence 9999999999999999777788999999999999999985
No 84
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=99.94 E-value=4e-27 Score=186.40 Aligned_cols=119 Identities=31% Similarity=0.511 Sum_probs=105.3
Q ss_pred ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
+++||++.+++..+-..+.+.+...+++++|+||+++|+|||||+..+++.+++|| +||+||+|||+.++.++..+.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~ 175 (462)
T PF00171_consen 96 FLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAEL 175 (462)
T ss_dssp HHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHH
T ss_pred hhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccccchhh
Confidence 36889998888655221124778899999999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|++|++++++++.++.|..|++++.|.||||+
T Consensus 176 ~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~ 215 (462)
T PF00171_consen 176 LEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGST 215 (462)
T ss_dssp HHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEH
T ss_pred ccccccccccccccccccccccceeeeccccceeeecchh
Confidence 9999999999999999888999999999999999999985
No 85
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=99.94 E-value=1.7e-26 Score=185.37 Aligned_cols=118 Identities=26% Similarity=0.368 Sum_probs=102.5
Q ss_pred hHHHHHHhhhcCCC-CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPI-SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++||++.+++.... ......+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++
T Consensus 137 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~l 216 (518)
T cd07125 137 CRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVEL 216 (518)
T ss_pred HHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHH
Confidence 46788777764321 11112244568889999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus 217 l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~ 256 (518)
T cd07125 217 LHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGST 256 (518)
T ss_pred HHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCH
Confidence 9999999999999999776788999999999999999996
No 86
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=99.94 E-value=1.7e-26 Score=182.33 Aligned_cols=117 Identities=26% Similarity=0.320 Sum_probs=99.6
Q ss_pred hHHHHHHhhhcCCCC-C-C---CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-E-D---PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~-~---~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++||++.+.+..+.. . . ...+...+++++|+|||++|+|||||+...++.+++|| +||+||+|||+.+|.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~ 168 (452)
T cd07147 89 FRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALI 168 (452)
T ss_pred HHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 467777766543211 1 1 01344567888999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++++++|+|+|++++++++ .+.++.|..|+++|.|.||||+
T Consensus 169 l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~ 211 (452)
T cd07147 169 LGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSP 211 (452)
T ss_pred HHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCH
Confidence 999999999999999999985 4678899999999999999986
No 87
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=99.94 E-value=2.8e-26 Score=180.90 Aligned_cols=117 Identities=32% Similarity=0.476 Sum_probs=100.0
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++++++..+...+.. ....++...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..+.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~ 167 (450)
T cd07092 88 FRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAEL 167 (450)
T ss_pred HHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHH
Confidence 456666555543321 1112334578899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++ |+|+|+++++++++.+.++.|++|+++|.|+||||+
T Consensus 168 ~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~ 206 (450)
T cd07092 168 AAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSV 206 (450)
T ss_pred HHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcH
Confidence 999 999999999999777788999999999999999986
No 88
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=99.94 E-value=3.5e-26 Score=181.53 Aligned_cols=118 Identities=30% Similarity=0.394 Sum_probs=102.4
Q ss_pred hHHHHHHhhhcCCCC-CCC----CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDP----KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~----~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++||++.+++..+-. ... ..+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..
T Consensus 107 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~ 186 (473)
T cd07082 107 IRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIP 186 (473)
T ss_pred HHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 567777776653321 111 1345678899999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++++++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus 187 l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~ 230 (473)
T cd07082 187 LAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGST 230 (473)
T ss_pred HHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999777788999999999999999986
No 89
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=99.94 E-value=5.4e-26 Score=179.77 Aligned_cols=117 Identities=24% Similarity=0.372 Sum_probs=100.2
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++|+++...+..+...+...+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|.++..+.+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~ 167 (457)
T cd07108 88 FRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEIL 167 (457)
T ss_pred HHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHH
Confidence 4566666554433221122345567889999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++ +|+|+++++++++.+.++.|.+|+++|.|+||||+
T Consensus 168 ~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~ 205 (457)
T cd07108 168 AQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGST 205 (457)
T ss_pred HHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcH
Confidence 997 99999999999777788999999999999999996
No 90
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.94 E-value=5.3e-26 Score=179.31 Aligned_cols=119 Identities=31% Similarity=0.469 Sum_probs=100.6
Q ss_pred hHHHHHHhhhcCCC--CCC--C-CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQPI--SED--P-KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~~--~~~--~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++|+++.+++..+- ... + ..+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..
T Consensus 89 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~ 168 (453)
T cd07149 89 LRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALK 168 (453)
T ss_pred HHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 45677766554321 110 1 1233457889999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+.++++++|+|+|+++++++++.+.++.|.+|+++|.|.||||++
T Consensus 169 l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~ 213 (453)
T cd07149 169 LAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPA 213 (453)
T ss_pred HHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHH
Confidence 999999999999999999997677789999999999999999963
No 91
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.93 E-value=2.6e-26 Score=197.52 Aligned_cols=109 Identities=29% Similarity=0.447 Sum_probs=99.4
Q ss_pred ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
|++||++.+++... ...++|+||+++|+|||||+...++.+++|| +||+||+|||+++|+++..+.++
T Consensus 657 ~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~l 725 (1208)
T PRK11905 657 FLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRL 725 (1208)
T ss_pred HHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHH
Confidence 57899988776532 1346799999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
++++|+|+|++|++++++.+.++.|+.|++|++|.||||++
T Consensus 726 l~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~ 766 (1208)
T PRK11905 726 LHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTE 766 (1208)
T ss_pred HHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHH
Confidence 99999999999999998888999999999999999999963
No 92
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=99.93 E-value=8.2e-26 Score=178.69 Aligned_cols=116 Identities=24% Similarity=0.385 Sum_probs=98.8
Q ss_pred hHHHHHHhhhcCCCC--CCC-CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS--EDP-KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY 77 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~--~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~ 77 (120)
++||++.+.+...-. ... ......+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~ 165 (454)
T cd07101 86 ARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAV 165 (454)
T ss_pred HHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHH
Confidence 467777776553211 111 1234678999999999999999999999999999999 699999999999999999999
Q ss_pred HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++++|+|+|++|++++++.+.++.|.+| +|.|.||||+
T Consensus 166 ~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~ 205 (454)
T cd07101 166 ELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGST 205 (454)
T ss_pred HHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCH
Confidence 999999999999999999877888999987 6889999996
No 93
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=99.93 E-value=9.9e-26 Score=180.17 Aligned_cols=95 Identities=29% Similarity=0.466 Sum_probs=91.0
Q ss_pred ceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHH
Q psy1844 24 NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGD 102 (120)
Q Consensus 24 ~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~ 102 (120)
..+.+++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|.++..++++++++|+|+|++|++++++.+.++
T Consensus 151 ~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~ 230 (496)
T PLN00412 151 YCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGD 230 (496)
T ss_pred eeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHH
Confidence 467889999999999999999999999999999 6999999999999999999999999999999999999997777899
Q ss_pred HHHhCCCcceEEEecC
Q psy1844 103 TITASPYLAGINFTGS 118 (120)
Q Consensus 103 ~l~~~~~i~~v~ftGs 118 (120)
.|..|+++|.|.||||
T Consensus 231 ~l~~~~~v~~V~ftGs 246 (496)
T PLN00412 231 FLTMHPGVNCISFTGG 246 (496)
T ss_pred HHhcCCCcCEEEEeCh
Confidence 9999999999999998
No 94
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=99.93 E-value=9e-26 Score=178.63 Aligned_cols=117 Identities=24% Similarity=0.262 Sum_probs=98.6
Q ss_pred ChHHHHHHhhhcCCC--CCCC--CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 1 LNAFFAKELTKYQPI--SEDP--KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 1 ~~~~~a~~~~~~~~~--~~~~--~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
+++||++.+++..+- .... ..+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~ 145 (449)
T cd07136 66 EINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKV 145 (449)
T ss_pred HHHHHHHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHH
Confidence 367888877765321 1111 1244578899999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+.++++++ +|+|++|++++ +.+.+..|++|+ +|.|.||||++
T Consensus 146 l~~~~~~a-lP~gv~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~ 187 (449)
T cd07136 146 IAKIIEET-FDEEYVAVVEG-GVEENQELLDQK-FDYIFFTGSVR 187 (449)
T ss_pred HHHHHHHh-CCCCEEEEEeC-ChHHHHHHhcCC-CCEEEEECCHH
Confidence 99999998 99999999998 456788888776 99999999963
No 95
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=99.93 E-value=9.8e-26 Score=179.97 Aligned_cols=100 Identities=15% Similarity=0.104 Sum_probs=91.5
Q ss_pred CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH----HHHHHHhCCCCCcEEEEe
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI----YKIMIEAGVPPGVVNFVP 94 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~----~~~l~~ag~p~g~~~~i~ 94 (120)
+.+...+++++|+||+++|+|||||+.+..+++++|| +||+||+|||+++|.++..+ .++++++|+|+|++|+++
T Consensus 93 ~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~ 172 (488)
T TIGR02518 93 DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCIT 172 (488)
T ss_pred CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEc
Confidence 3456678899999999999999999999999999999 79999999999999999984 555578899999999999
Q ss_pred CCChHHHHHHHhCCCcceEEEecCC
Q psy1844 95 ADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 95 ~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++.+.++.|++|++||+|.||||+
T Consensus 173 g~~~e~~~~L~~~~~vd~V~fTGs~ 197 (488)
T TIGR02518 173 VPTIEGTNELMKNKDTSLILATGGE 197 (488)
T ss_pred CCCHHHHHHHHhCCCcCEEEEeCCH
Confidence 8778899999999999999999996
No 96
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.93 E-value=9.2e-26 Score=181.37 Aligned_cols=116 Identities=25% Similarity=0.419 Sum_probs=98.9
Q ss_pred hHHHHHHhhhcCCC---CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPI---SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY 77 (120)
Q Consensus 2 ~~~~a~~~~~~~~~---~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~ 77 (120)
++||++.+.+...- ..........+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.
T Consensus 122 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~ 201 (524)
T PRK09407 122 ARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAV 201 (524)
T ss_pred HHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Confidence 46777776654221 11111235678899999999999999999999999999999 699999999999999999999
Q ss_pred HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++++|+|+|+++++++++.+.++.|..| +|.|.||||+
T Consensus 202 ~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~ 241 (524)
T PRK09407 202 ELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGST 241 (524)
T ss_pred HHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCH
Confidence 999999999999999999777788999876 7899999996
No 97
>PLN02203 aldehyde dehydrogenase
Probab=99.93 E-value=1.2e-25 Score=179.39 Aligned_cols=116 Identities=20% Similarity=0.182 Sum_probs=98.8
Q ss_pred hHHHHHHhhhcCC----CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQP----ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~----~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++|+++.+++... ..+........+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l 154 (484)
T PLN02203 75 ANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFL 154 (484)
T ss_pred HHHHHHHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHH
Confidence 4677776665522 111112345678999999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
.+++++. +|+|++|++++ +.+.++.|..|+ +|.|.||||++
T Consensus 155 ~~~~~~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~ 195 (484)
T PLN02203 155 AANIPKY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPR 195 (484)
T ss_pred HHHHHHh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHH
Confidence 9999996 99999999998 678899999995 99999999963
No 98
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=99.93 E-value=1.3e-25 Score=177.02 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=97.7
Q ss_pred hHHHHHHhhhcCC-CCCCC----CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQP-ISEDP----KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~-~~~~~----~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++||++.+.+... ..... ......+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.++..
T Consensus 74 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~ 153 (436)
T cd07135 74 ILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAAL 153 (436)
T ss_pred HHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHH
Confidence 5788888776422 11111 1234578899999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+.+++++ |+|+|+++++++++++. ..|+.|+ +|.|.||||++
T Consensus 154 l~~l~~~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~ 195 (436)
T cd07135 154 LAELVPK-YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGR 195 (436)
T ss_pred HHHHHHH-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcH
Confidence 9999999 69999999999866554 5688999 99999999963
No 99
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=99.93 E-value=8e-26 Score=180.89 Aligned_cols=92 Identities=33% Similarity=0.568 Sum_probs=88.4
Q ss_pred EeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh
Q psy1844 28 YRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA 106 (120)
Q Consensus 28 ~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~ 106 (120)
.++|+|||++|+|||||+...++++++|| +||+||+|||+++|+++..+.++++++|+|+|++|++++++.+.++.|..
T Consensus 157 ~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~ 236 (500)
T TIGR01238 157 SVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTS 236 (500)
T ss_pred eccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhc
Confidence 68999999999999999999999999999 69999999999999999999999999999999999999876678999999
Q ss_pred CCCcceEEEecCC
Q psy1844 107 SPYLAGINFTGSV 119 (120)
Q Consensus 107 ~~~i~~v~ftGs~ 119 (120)
|+++|.|+||||+
T Consensus 237 ~~~v~~V~ftGs~ 249 (500)
T TIGR01238 237 DPRIAGVAFTGST 249 (500)
T ss_pred CCCcCeEEEECCH
Confidence 9999999999996
No 100
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=99.93 E-value=1.7e-25 Score=176.27 Aligned_cols=116 Identities=21% Similarity=0.202 Sum_probs=97.1
Q ss_pred hHHHHHHhhhcCC-CC--CC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQP-IS--ED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~-~~--~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++||++.+.+... .. .. .......+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l 147 (432)
T cd07137 68 CKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALL 147 (432)
T ss_pred HHHHHHHHHHHhCCcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHH
Confidence 5788887765321 11 11 12233567899999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
.++++++ +|+|++|++++ +.+.++.|++| .+|.|.||||++
T Consensus 148 ~~~~~~~-~P~gvv~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~ 188 (432)
T cd07137 148 AKLIPEY-LDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPR 188 (432)
T ss_pred HHHHHHh-CCcCeEEEEeC-CHHHHHHHHhC-CCCEEEEECChH
Confidence 9999995 99999999999 55678889887 599999999963
No 101
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=99.93 E-value=1.7e-25 Score=176.63 Aligned_cols=116 Identities=25% Similarity=0.350 Sum_probs=99.2
Q ss_pred hHHHHHHhhhcCCC---CCCC-CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQPI---SEDP-KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~~---~~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++|+++.+.+.... .... ..+...+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l 165 (453)
T cd07099 86 IDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELL 165 (453)
T ss_pred HHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 46777777665321 1111 2345678899999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.++++++|+|+|+++++++++ +.++.|.+| .+|.|.||||+
T Consensus 166 ~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~ 206 (453)
T cd07099 166 AEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSV 206 (453)
T ss_pred HHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCH
Confidence 999999999999999999965 678888887 49999999996
No 102
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=99.93 E-value=7.7e-26 Score=176.71 Aligned_cols=116 Identities=15% Similarity=0.165 Sum_probs=96.0
Q ss_pred hHHHHHHhhhcCCCCCC--CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISED--PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK 78 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~ 78 (120)
++||++..+......+. ..++.+.+++++|+|||++|+||| | ..+++.+++|| +||+||+|||+++|+++..+++
T Consensus 72 ~~~~a~~a~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~ 149 (398)
T TIGR00407 72 VKDVIELADPVGKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVE 149 (398)
T ss_pred HHHHhcCCCCCcccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHH
Confidence 56777777654211111 124557889999999999999997 6 66888999999 6999999999999999999999
Q ss_pred H----HHHhCCCCCcEEEEeCCC-hHHHHHHHhCCCcceEEEecCC
Q psy1844 79 I----MIEAGVPPGVVNFVPADG-PVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 79 ~----l~~ag~p~g~~~~i~~~~-~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+ +.++|+|+|++|++++++ ++.++.|..|+++|+|.||||+
T Consensus 150 ~~~~al~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~ 195 (398)
T TIGR00407 150 VIQDALAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGN 195 (398)
T ss_pred HHHHHHHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCH
Confidence 9 559999999999999844 4578889999999999999996
No 103
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=99.93 E-value=1.3e-26 Score=183.87 Aligned_cols=109 Identities=32% Similarity=0.471 Sum_probs=101.0
Q ss_pred ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
||||||++.++..+ + ..++|+|.+.+|+|||||+......+++|| +||+|+.||.|++|+.+..-.++
T Consensus 217 FlrYYA~~ar~~~g-----~------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~l 285 (769)
T COG4230 217 FLRYYAGQARDTFG-----N------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRL 285 (769)
T ss_pred HHHHHHHHHhcccC-----c------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHH
Confidence 89999999987422 0 346778999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
++|+|+|++++++++|+++.++..|..++++++|.||||++
T Consensus 286 l~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTe 326 (769)
T COG4230 286 LHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTE 326 (769)
T ss_pred HHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHH
Confidence 99999999999999999988999999999999999999974
No 104
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=99.93 E-value=2.2e-25 Score=176.07 Aligned_cols=117 Identities=26% Similarity=0.270 Sum_probs=100.2
Q ss_pred hHHHHHHhhhcC--C--C-CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844 2 NAFFAKELTKYQ--P--I-SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT 75 (120)
Q Consensus 2 ~~~~a~~~~~~~--~--~-~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~ 75 (120)
++||++.+.+.. . . ..........+.+++|+|||++|+|||||++.+++++++|| +||+||+|||+++|.++..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~ 145 (442)
T cd07084 66 LRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQI 145 (442)
T ss_pred HHHHHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHH
Confidence 467777766431 1 1 11111234678899999999999999999999999999999 7999999999999999999
Q ss_pred HHHHHHHhCC-CCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 76 IYKIMIEAGV-PPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 76 ~~~~l~~ag~-p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+.++++++|+ |+|++++++++++ .++.|++|+++|.|+||||+
T Consensus 146 l~~~l~~ag~~P~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~ 189 (442)
T cd07084 146 MVRLLHYAGLLPPEDVTLINGDGK-TMQALLLHPNPKMVLFTGSS 189 (442)
T ss_pred HHHHHHHhCCCCccceEEeeCCcH-HHHHHHcCCCCCEEEEECCH
Confidence 9999999998 9999999999765 88999999999999999996
No 105
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=99.93 E-value=1.8e-25 Score=177.01 Aligned_cols=98 Identities=22% Similarity=0.260 Sum_probs=88.5
Q ss_pred cceEEEeccCeEEEEEcCCChhhhh--HHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeC
Q psy1844 23 LNSLRYRGLDGFVAAVSPFNFTAIG--GNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPA 95 (120)
Q Consensus 23 ~~~~~~~~p~Gvv~~i~p~n~P~~~--~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~ 95 (120)
...+.+++|+|||++|+|||||+.. .++++++|| +||+||+|||+.+|.++..+.+++. ++|+|+|+++++++
T Consensus 97 ~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g 176 (454)
T cd07129 97 PDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQG 176 (454)
T ss_pred ccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeC
Confidence 3457889999999999999999987 458899999 6999999999999999999888775 88999999999999
Q ss_pred CChHHHHHHHhCCCcceEEEecCCC
Q psy1844 96 DGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 96 ~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
++.+.++.|++|++++.|.||||++
T Consensus 177 ~~~~~~~~L~~~~~v~~V~fTGs~~ 201 (454)
T cd07129 177 GGREVGVALVKHPAIKAVGFTGSRR 201 (454)
T ss_pred CcHHHHHHHhcCCCccEEEEeCChH
Confidence 7767899999999999999999963
No 106
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=99.93 E-value=2.3e-25 Score=176.50 Aligned_cols=97 Identities=22% Similarity=0.234 Sum_probs=88.0
Q ss_pred CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH----HHhCCCCCcEEEEeCC
Q psy1844 22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVVNFVPAD 96 (120)
Q Consensus 22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l----~~ag~p~g~~~~i~~~ 96 (120)
....+++++|+||+++|+|||||+..++..+++|| +||+||+|||+++|+++..+.+++ +++|+|+|++++++++
T Consensus 111 ~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~ 190 (465)
T cd07098 111 YKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCL 190 (465)
T ss_pred CceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECC
Confidence 34567889999999999999999999999999999 799999999999999998765554 6889999999999996
Q ss_pred ChHHHHHHHhCCCcceEEEecCC
Q psy1844 97 GPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 97 ~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+ +.++.|..|++++.|.||||+
T Consensus 191 ~-~~~~~L~~~~~v~~V~ftGs~ 212 (465)
T cd07098 191 P-ETAEALTSHPVIDHITFIGSP 212 (465)
T ss_pred H-HHHHHHhcCCCCCEEEEECCH
Confidence 5 789999999999999999996
No 107
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=99.93 E-value=1.3e-25 Score=180.12 Aligned_cols=116 Identities=22% Similarity=0.294 Sum_probs=93.5
Q ss_pred hHHHHHHhhhcCC---------CCCCCCCC-cceEEEecc-CeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCc
Q psy1844 2 NAFFAKELTKYQP---------ISEDPKST-LNSLRYRGL-DGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTA 69 (120)
Q Consensus 2 ~~~~a~~~~~~~~---------~~~~~~~~-~~~~~~~~p-~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~ 69 (120)
++||++.+++... ..+...+. ...+++++| +|||++|+|||||+..+++++++|| +||+||+|||+.+
T Consensus 104 ~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~t 183 (513)
T cd07128 104 LFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATAT 183 (513)
T ss_pred HHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 6789988876531 01101112 235677899 5999999999999999999999999 6999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 70 LLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 70 ~~~~~~~~~~l~~ag-~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
|+++..+.+++.++| +|+|++|++++++.+.++.+ +.+|+|.||||++
T Consensus 184 p~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 184 AYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred CHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 999999999999999 89999999998644333332 5799999999963
No 108
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=99.93 E-value=3.5e-25 Score=176.94 Aligned_cols=94 Identities=21% Similarity=0.291 Sum_probs=88.4
Q ss_pred cceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHH
Q psy1844 23 LNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFG 101 (120)
Q Consensus 23 ~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~ 101 (120)
.+.+++++|+|||++|+|||||+..+++++++|| |||+||+|||+.+|.++..+.++++++ +|+|+++++++ +.+.+
T Consensus 101 ~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-lp~~~v~vv~g-~~~~~ 178 (493)
T PTZ00381 101 GKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEG-GVEVT 178 (493)
T ss_pred CceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEecC-CHHHH
Confidence 4578899999999999999999999999999999 699999999999999999999999996 99999999998 56788
Q ss_pred HHHHhCCCcceEEEecCC
Q psy1844 102 DTITASPYLAGINFTGSV 119 (120)
Q Consensus 102 ~~l~~~~~i~~v~ftGs~ 119 (120)
+.|.+|+ +|+|+||||+
T Consensus 179 ~~l~~~~-~d~i~FTGS~ 195 (493)
T PTZ00381 179 TELLKEP-FDHIFFTGSP 195 (493)
T ss_pred HHHHhCC-CCEEEEECCH
Confidence 8899887 9999999996
No 109
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=99.93 E-value=3.5e-25 Score=174.48 Aligned_cols=116 Identities=19% Similarity=0.183 Sum_probs=97.5
Q ss_pred hHHHHHHhhhcCC-CC--CC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQP-IS--ED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~-~~--~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++||++.+.+... .. .. ...+...+.+++|+|||++|+|||||+..+++.+++|| +||+||+|||+.+|.++..+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l 147 (434)
T cd07133 68 IKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALL 147 (434)
T ss_pred HHHHHHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHH
Confidence 5788877765321 11 10 11244578899999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
.++++++ +|+|++++++++ .+.++.|..|+ +|.|.||||++
T Consensus 148 ~~l~~~a-lP~g~~~~v~g~-~~~~~~l~~~~-v~~V~ftGs~~ 188 (434)
T cd07133 148 AELLAEY-FDEDEVAVVTGG-ADVAAAFSSLP-FDHLLFTGSTA 188 (434)
T ss_pred HHHHHHh-CCcCeEEEEeCC-hHHHHHHHhCC-CCEEEEeCchH
Confidence 9999997 999999999984 56788888776 99999999963
No 110
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=99.93 E-value=1.6e-25 Score=178.41 Aligned_cols=93 Identities=35% Similarity=0.599 Sum_probs=87.9
Q ss_pred EEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHH
Q psy1844 26 LRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTI 104 (120)
Q Consensus 26 ~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l 104 (120)
+..++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++++++|+|+|+++++++++ +.+..|
T Consensus 142 ~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l 220 (480)
T cd07111 142 LAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSAL 220 (480)
T ss_pred cccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHH
Confidence 3467899999999999999999999999999 69999999999999999999999999999999999999864 678999
Q ss_pred HhCCCcceEEEecCC
Q psy1844 105 TASPYLAGINFTGSV 119 (120)
Q Consensus 105 ~~~~~i~~v~ftGs~ 119 (120)
.+|+++|.|.||||+
T Consensus 221 ~~~~~v~~v~ftGs~ 235 (480)
T cd07111 221 ANHPGVDKVAFTGST 235 (480)
T ss_pred hcCCCcCEEEEECCH
Confidence 999999999999996
No 111
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=99.93 E-value=3.5e-25 Score=174.74 Aligned_cols=114 Identities=31% Similarity=0.417 Sum_probs=96.9
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++++++.....+... ...+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|.++..+.+++
T Consensus 87 l~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~ 164 (446)
T cd07106 87 LRYTASLDLPDEVIE--DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELA 164 (446)
T ss_pred HHHHHhhhhcCcccc--CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHH
Confidence 356665553221111 12345678999999999999999999999999999999 699999999999999999999999
Q ss_pred HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++ +|+|++++++++ .+.++.|.+|+++|.|.||||+
T Consensus 165 ~~~-lP~g~~~~v~g~-~~~~~~l~~~~~vd~V~fTGs~ 201 (446)
T cd07106 165 QEV-LPPGVLNVVSGG-DELGPALTSHPDIRKISFTGST 201 (446)
T ss_pred HHh-CCcCeEEEeeCC-hhHHHHHhcCCCCCEEEEECCH
Confidence 996 999999999984 5688999999999999999996
No 112
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=99.92 E-value=3.2e-25 Score=172.90 Aligned_cols=115 Identities=15% Similarity=0.156 Sum_probs=98.0
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM 80 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l 80 (120)
++++++...+..+... +. ....+++++|+||+++|+|||||+. .++.+++|| +||+||+|||+++|.++..+.+++
T Consensus 73 ~~~~a~~~~~~~~~~~-~~-~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~ 149 (397)
T cd07077 73 ERGITASVGHIQDVLL-PD-NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLF 149 (397)
T ss_pred HHHHHHhcCcccceEe-cC-CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHH
Confidence 3556655444322111 12 3467899999999999999999999 999999999 699999999999999999999999
Q ss_pred HHh---CCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 81 IEA---GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 81 ~~a---g~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++ |+|+++++++++.+.+.++.|..|+++|.|+||||+
T Consensus 150 ~~~~~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~ 191 (397)
T cd07077 150 QAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGR 191 (397)
T ss_pred HHHhhcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCH
Confidence 987 999999999998667788999999999999999996
No 113
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=99.92 E-value=4.1e-25 Score=178.33 Aligned_cols=93 Identities=24% Similarity=0.326 Sum_probs=85.5
Q ss_pred EEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHH----HHHHHHHHhCCCCCcEEEEeCC-ChHH
Q psy1844 27 RYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNY----TIYKIMIEAGVPPGVVNFVPAD-GPVF 100 (120)
Q Consensus 27 ~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~----~~~~~l~~ag~p~g~~~~i~~~-~~~~ 100 (120)
.+++|+||+++|+|||||++..+..+++|| +||+||+|||+.+++++. .+.++|+++|+|+|++|+++++ +.+.
T Consensus 189 ~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~ 268 (549)
T cd07127 189 FTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPI 268 (549)
T ss_pred eEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHH
Confidence 467999999999999999999999999999 699999999999998864 4668999999999999999985 3678
Q ss_pred HHHHHhCCCcceEEEecCC
Q psy1844 101 GDTITASPYLAGINFTGSV 119 (120)
Q Consensus 101 ~~~l~~~~~i~~v~ftGs~ 119 (120)
++.|+.|+++++|.||||+
T Consensus 269 ~~~L~~~p~v~~I~FTGS~ 287 (549)
T cd07127 269 AQTLATRPEVRIIDFTGSN 287 (549)
T ss_pred HHHHHhCCCCCEEEEECCH
Confidence 9999999999999999996
No 114
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=99.92 E-value=4.6e-25 Score=177.30 Aligned_cols=117 Identities=22% Similarity=0.277 Sum_probs=94.5
Q ss_pred ChHHHHHHhhhcCCCC-CC-C-------CCCcceEEEecc-CeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCc
Q psy1844 1 LNAFFAKELTKYQPIS-ED-P-------KSTLNSLRYRGL-DGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTA 69 (120)
Q Consensus 1 ~~~~~a~~~~~~~~~~-~~-~-------~~~~~~~~~~~p-~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~ 69 (120)
+++||++.+++..+.. .. . +.....+..++| +||+++|+|||||+..+++++++|| +||+||+|||+.+
T Consensus 108 ~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~t 187 (521)
T PRK11903 108 TLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATAT 187 (521)
T ss_pred HHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcC
Confidence 3688888877653211 00 0 012224566778 6999999999999999999999999 6999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 70 LLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 70 ~~~~~~~~~~l~~ag-~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
|+++..+.+++.++| +|+|+++++++++.+..+.| +++|.|.||||++
T Consensus 188 p~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~ 236 (521)
T PRK11903 188 AWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAE 236 (521)
T ss_pred hHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHH
Confidence 999999999999999 99999999998665554444 7899999999963
No 115
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=99.92 E-value=4.2e-25 Score=182.82 Aligned_cols=113 Identities=16% Similarity=0.083 Sum_probs=95.5
Q ss_pred hHHHHHHhhhcCC-CCC-C-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844 2 NAFFAKELTKYQP-ISE-D-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY 77 (120)
Q Consensus 2 ~~~~a~~~~~~~~-~~~-~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~ 77 (120)
++|||+. .+..+ ... . ...+...+++++|+|||++|+||| |+... +++++|| +||+||+|||+.+|+++..++
T Consensus 374 ~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 374 IRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 5677776 33322 211 0 123444788999999999999999 99998 8999999 699999999999999999999
Q ss_pred HHHHHhCCCCCc----EEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 78 KIMIEAGVPPGV----VNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 78 ~~l~~ag~p~g~----~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++++ +|+|+ +|++++ +.+.++.|..|+.+|+|.||||+
T Consensus 451 ~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt 494 (718)
T PLN02418 451 KVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSN 494 (718)
T ss_pred HHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCH
Confidence 999999 99996 999997 56789999999999999999996
No 116
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=99.92 E-value=8e-25 Score=179.92 Aligned_cols=116 Identities=20% Similarity=0.310 Sum_probs=94.2
Q ss_pred hHHHHHHhhhcC--------C-CCCCCC-CCcceEEEeccC-eEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCc
Q psy1844 2 NAFFAKELTKYQ--------P-ISEDPK-STLNSLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTA 69 (120)
Q Consensus 2 ~~~~a~~~~~~~--------~-~~~~~~-~~~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~ 69 (120)
++||++.+++.. + ..+... .....+++++|+ |||++|+|||||+..+++++++|| +||+||+|||+.+
T Consensus 104 ~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~t 183 (663)
T TIGR02278 104 LFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPT 183 (663)
T ss_pred HHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 688888887631 1 111111 123467899997 999999999999999999999999 6999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 70 LLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 70 ~~~~~~~~~~l~~ag-~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
|+++..+.+++.++| +|+|++|+++++. .+.+..++.+|.|.||||++
T Consensus 184 p~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 184 AYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence 999999999999999 9999999999852 23333347789999999963
No 117
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=99.92 E-value=1.5e-24 Score=182.55 Aligned_cols=99 Identities=17% Similarity=0.239 Sum_probs=92.0
Q ss_pred CCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeC
Q psy1844 21 STLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPA 95 (120)
Q Consensus 21 ~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~ 95 (120)
+....+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..++++++ ++|+|+|+++++++
T Consensus 98 ~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g 177 (862)
T PRK13805 98 DEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEE 177 (862)
T ss_pred CCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecC
Confidence 455678999999999999999999999999999999 6999999999999999999888875 57999999999998
Q ss_pred CChHHHHHHHhCCCcceEEEecCC
Q psy1844 96 DGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 96 ~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++.+.++.|++|+++|+|+||||+
T Consensus 178 ~~~~~~~~L~~~~~vd~I~fTGs~ 201 (862)
T PRK13805 178 PSVELTNALMNHPGIALILATGGP 201 (862)
T ss_pred CCHHHHHHHHcCCCccEEEecCCH
Confidence 777889999999999999999996
No 118
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=99.92 E-value=2.2e-24 Score=169.52 Aligned_cols=115 Identities=23% Similarity=0.256 Sum_probs=96.9
Q ss_pred hHHHHHHhhhcCC---CCCC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQP---ISED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~---~~~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++|+++.+++... .... ...+.+.+.+++|+|||++|+|||||+...++.+++|| +||+||+|||+.+|+++..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l 146 (426)
T cd07087 67 IDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALL 146 (426)
T ss_pred HHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHH
Confidence 4667776664421 1111 12344678899999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
.+++++ |+|+|++++++++ .+.++.|++|+ +|.|.||||+
T Consensus 147 ~~~~~~-~~P~gv~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~ 186 (426)
T cd07087 147 AKLIPK-YFDPEAVAVVEGG-VEVATALLAEP-FDHIFFTGSP 186 (426)
T ss_pred HHHHHH-hCCCCEEEEEeCC-chHHHHHHhCC-CCEEEEeCCh
Confidence 999999 6999999999985 45688999998 9999999996
No 119
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=99.91 E-value=1.8e-24 Score=178.18 Aligned_cols=93 Identities=20% Similarity=0.354 Sum_probs=82.6
Q ss_pred eEEEeccC-eEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhC-CCCCcEEEEeCCChHHH
Q psy1844 25 SLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFG 101 (120)
Q Consensus 25 ~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag-~p~g~~~~i~~~~~~~~ 101 (120)
.+..++|+ |||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++.++| +|+|++|+++++..
T Consensus 141 ~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--- 217 (675)
T PRK11563 141 GRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG--- 217 (675)
T ss_pred ceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---
Confidence 46777886 999999999999999999999999 6999999999999999999999999999 99999999998532
Q ss_pred HHHHhCCCcceEEEecCCC
Q psy1844 102 DTITASPYLAGINFTGSVP 120 (120)
Q Consensus 102 ~~l~~~~~i~~v~ftGs~~ 120 (120)
+.+..++++++|.||||++
T Consensus 218 ~~~~~~~~i~~v~FTGS~~ 236 (675)
T PRK11563 218 DLLDHLDGQDVVTFTGSAA 236 (675)
T ss_pred HHhhcCCCCCEEEEECcHH
Confidence 3333346799999999963
No 120
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=99.91 E-value=1.7e-24 Score=169.43 Aligned_cols=97 Identities=22% Similarity=0.239 Sum_probs=86.4
Q ss_pred CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeCC
Q psy1844 22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPAD 96 (120)
Q Consensus 22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~~ 96 (120)
+...+++++|+|||++|+|| +| ..+++++++|| +||+||+|||+++|+++..+.++++ ++|+|+|++|+++++
T Consensus 100 ~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~ 177 (406)
T cd07079 100 GLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQLIPDT 177 (406)
T ss_pred ccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEEecCC
Confidence 34678899999999999997 56 67889999999 6999999999999999999999987 789999999999985
Q ss_pred Ch-HHHHHHHhCCCcceEEEecCCC
Q psy1844 97 GP-VFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 97 ~~-~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+. +.++.|.+||++|+|.||||++
T Consensus 178 ~~~~~~~~l~~~~~v~~i~fTGS~~ 202 (406)
T cd07079 178 DREAVQELLKLDDYIDLIIPRGGAG 202 (406)
T ss_pred ChHHHHHHHcCCCCccEEEeCCCHH
Confidence 44 5688899999999999999963
No 121
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=99.91 E-value=5.1e-24 Score=167.88 Aligned_cols=95 Identities=23% Similarity=0.254 Sum_probs=89.2
Q ss_pred CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHH
Q psy1844 22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVF 100 (120)
Q Consensus 22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~ 100 (120)
+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++++++ +|+|+++++++ +.+.
T Consensus 91 ~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g-~~~~ 168 (433)
T cd07134 91 GTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEG-DAEV 168 (433)
T ss_pred CCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeC-ChhH
Confidence 44678999999999999999999999999999999 699999999999999999999999999 99999999998 4568
Q ss_pred HHHHHhCCCcceEEEecCC
Q psy1844 101 GDTITASPYLAGINFTGSV 119 (120)
Q Consensus 101 ~~~l~~~~~i~~v~ftGs~ 119 (120)
++.|++|+ ++.|.||||+
T Consensus 169 ~~~l~~~~-v~~v~ftGs~ 186 (433)
T cd07134 169 AQALLELP-FDHIFFTGSP 186 (433)
T ss_pred HHHHHhCC-CCEEEEECCh
Confidence 88999998 9999999996
No 122
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=99.91 E-value=4.2e-24 Score=167.73 Aligned_cols=97 Identities=22% Similarity=0.245 Sum_probs=85.1
Q ss_pred CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH----HHhCCCCCcEEEEeCC
Q psy1844 22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVVNFVPAD 96 (120)
Q Consensus 22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l----~~ag~p~g~~~~i~~~ 96 (120)
+...+++++|+|||++|+||| | ..+++.+++|| +||+||+|||+.+|.++..+++++ +++|+|+|++|++++.
T Consensus 106 ~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~ 183 (417)
T PRK00197 106 GLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQLVETT 183 (417)
T ss_pred CceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEEecCC
Confidence 346789999999999999986 4 67888999999 699999999999999999988885 6889999999999964
Q ss_pred C-hHHHHHHHhCCCcceEEEecCCC
Q psy1844 97 G-PVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 97 ~-~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+ ++.++.|.+|+++|+|.||||++
T Consensus 184 ~~~~~~~~l~~~~~v~~V~fTGS~~ 208 (417)
T PRK00197 184 DRAAVGELLKLDGYVDVIIPRGGAG 208 (417)
T ss_pred ChHHHHHHhccCCCccEEEecCCHH
Confidence 4 44778888899999999999963
No 123
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=99.91 E-value=1.1e-23 Score=166.48 Aligned_cols=116 Identities=14% Similarity=0.139 Sum_probs=94.3
Q ss_pred hHHHHHHhhhcCC-CCCC---CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844 2 NAFFAKELTKYQP-ISED---PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI 76 (120)
Q Consensus 2 ~~~~a~~~~~~~~-~~~~---~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~ 76 (120)
++|+++.+++... .... .......+..++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l 146 (443)
T cd07132 67 IKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLL 146 (443)
T ss_pred HHHHHHHHHHHhCCccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHH
Confidence 3566666665421 1111 11234578899999999999999999999999999999 69999999999999999999
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
.++++++ +|+|+++++++++. ....+.. +++|.|.||||++
T Consensus 147 ~~~~~~~-lp~gv~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~ 187 (443)
T cd07132 147 AELIPKY-LDKECYPVVLGGVE-ETTELLK-QRFDYIFYTGSTS 187 (443)
T ss_pred HHHHHHh-CCcCeEEEEeCCHH-HHHHHHh-CCCCEEEEECChH
Confidence 9999986 99999999999544 4566775 4899999999963
No 124
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=99.91 E-value=2e-23 Score=160.61 Aligned_cols=118 Identities=31% Similarity=0.509 Sum_probs=103.2
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++|+++.+++..... .....+...+.+++|+||+++|.|||||+...++.+++|| +||+||+|||+.++.++..+.++
T Consensus 62 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~ 141 (367)
T cd06534 62 FRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAEL 141 (367)
T ss_pred HHHHHHHHHHhcCCcccccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHH
Confidence 466777776654321 2234556678899999999999999999999999999999 69999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
++++|+|+|+++++++++++.++.|..|+++|.|.||||+
T Consensus 142 l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~ 181 (367)
T cd06534 142 LQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGST 181 (367)
T ss_pred HHhcCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCH
Confidence 9999999999999999777788999999999999999985
No 125
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=99.90 E-value=3.5e-23 Score=162.17 Aligned_cols=118 Identities=31% Similarity=0.528 Sum_probs=100.8
Q ss_pred hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~ 79 (120)
++++++.+++..... .....+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||++++.++..+.++
T Consensus 66 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~ 145 (432)
T cd07078 66 FRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAEL 145 (432)
T ss_pred HHHHHHHHHHhcCccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH
Confidence 345555555542211 2223456678889999999999999999999999999999 79999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
|+++|+|+|+++++++++++.++.|..|+++|.|.||||.
T Consensus 146 l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~ 185 (432)
T cd07078 146 LAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGST 185 (432)
T ss_pred HHHcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 9999999999999999766688999999999999999985
No 126
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=99.89 E-value=3.6e-23 Score=171.35 Aligned_cols=94 Identities=19% Similarity=0.125 Sum_probs=85.1
Q ss_pred CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCC----cEEEEeCC
Q psy1844 22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG----VVNFVPAD 96 (120)
Q Consensus 22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g----~~~~i~~~ 96 (120)
+...+++++|+|||++|+||| |+.. ++++++|| |||+||+|||+.+|.++..+.++++++ +|+| +++++++
T Consensus 388 ~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~~~~~~~~v~~- 463 (715)
T TIGR01092 388 NLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHVGKKLIGLVTS- 463 (715)
T ss_pred CceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCCCCcEEEEeCC-
Confidence 334678999999999999999 9988 58999999 699999999999999999999999999 9987 6899985
Q ss_pred ChHHHHHHHhCCCcceEEEecCC
Q psy1844 97 GPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 97 ~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+++.++.|..|+.+|+|+||||+
T Consensus 464 ~~~~~~~l~~~~~vd~I~fTGS~ 486 (715)
T TIGR01092 464 REEIPDLLKLDDVIDLVIPRGSN 486 (715)
T ss_pred hHHHHHHHhcCCCccEEEEcCCH
Confidence 56678889999999999999996
No 127
>KOG2456|consensus
Probab=99.89 E-value=5.8e-23 Score=158.14 Aligned_cols=98 Identities=17% Similarity=0.208 Sum_probs=88.8
Q ss_pred CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCCh
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGP 98 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~ 98 (120)
+-..+.++..+|.|||++|+|||||+..++.+++.|| |||+||+||||-++.++..+++++-++ ++++.++++.|.-.
T Consensus 93 t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Ggv~ 171 (477)
T KOG2456|consen 93 TFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGGVP 171 (477)
T ss_pred cccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCCCc
Confidence 3457789999999999999999999999999999999 699999999999999999999999999 99999999999544
Q ss_pred HHHHHHHhCCCcceEEEecCCC
Q psy1844 99 VFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 99 ~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
| +..|.++ ++|+|+||||++
T Consensus 172 E-Tt~LL~~-rfD~IfyTGsp~ 191 (477)
T KOG2456|consen 172 E-TTELLKQ-RFDHIFYTGSPR 191 (477)
T ss_pred h-HHHHHHh-hccEEEecCCch
Confidence 4 5555556 799999999974
No 128
>KOG2455|consensus
Probab=99.81 E-value=3.5e-20 Score=144.02 Aligned_cols=117 Identities=74% Similarity=1.170 Sum_probs=102.7
Q ss_pred hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMI 81 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~l~ 81 (120)
+.+|+.++.+.+.+.. ..+--+...+|+-.|-|.+|+||||-....--..+|||+||.|+||||..+.+++..+.++|+
T Consensus 169 na~ya~eL~~~qpi~~-~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLMGN~VLwkPS~ta~lssYii~~il~ 247 (561)
T KOG2455|consen 169 NAKYASELYAQQPISQ-TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAALSSYIIYRILR 247 (561)
T ss_pred hHHHHHHhhhcCCccc-cCCCCcceeeccccceeEEecccceeeeccccccChhhhcceeeecccchhHHHHHHHHHHHH
Confidence 3445555555555443 345567788888889999999999998888888899999999999999999999999999999
Q ss_pred HhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 82 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 82 ~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
|||+|+|++|++++++...++.+.+++++.++.||||+
T Consensus 248 EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~ 285 (561)
T KOG2455|consen 248 EAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSV 285 (561)
T ss_pred HcCCCccceeeccCCCCeecceeccCcccceeeeeccc
Confidence 99999999999999999999999999999999999996
No 129
>KOG2454|consensus
Probab=99.79 E-value=1.4e-19 Score=139.40 Aligned_cols=94 Identities=24% Similarity=0.307 Sum_probs=87.2
Q ss_pred eEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHh----CCCCCcEEEEeCCChH
Q psy1844 25 SLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPADGPV 99 (120)
Q Consensus 25 ~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~a----g~p~g~~~~i~~~~~~ 99 (120)
.++.++|+||++.|.|||||++..+.++++|| +||++|+|.||++.++.....++++.+ |-|+++++++++- .|
T Consensus 182 ~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd 260 (583)
T KOG2454|consen 182 SRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PD 260 (583)
T ss_pred ceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cc
Confidence 57889999999999999999999999999999 899999999999999999877776654 9999999999994 57
Q ss_pred HHHHHHhCCCcceEEEecCC
Q psy1844 100 FGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 100 ~~~~l~~~~~i~~v~ftGs~ 119 (120)
.+++|.+|+.++++.|.||.
T Consensus 261 ~a~~ltSh~g~khitFiGSq 280 (583)
T KOG2454|consen 261 TAEALTSHSGVKHITFIGSQ 280 (583)
T ss_pred hHhHhhcCCCcceEEEecCc
Confidence 89999999999999999996
No 130
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.76 E-value=2e-18 Score=135.84 Aligned_cols=94 Identities=15% Similarity=0.105 Sum_probs=83.7
Q ss_pred CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCC----CcEEEEe--
Q psy1844 22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPP----GVVNFVP-- 94 (120)
Q Consensus 22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~----g~~~~i~-- 94 (120)
....+++++|+||+++|+|||||+ ..++.++.|| +||++|+|||+.+|.++..+.+++.++ +|+ +.++++.
T Consensus 103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~ 180 (422)
T cd07080 103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWP 180 (422)
T ss_pred CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEec
Confidence 456688899999999999999999 6888899999 699999999999999999999999999 787 8888884
Q ss_pred CCChHHHHHHHhCCCcceEEEecCC
Q psy1844 95 ADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 95 ~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
|.+++.++.|.+++ |.|+||||+
T Consensus 181 g~~~~~~~~l~~~~--D~i~~~Gs~ 203 (422)
T cd07080 181 GGDAELEERILASA--DAVVAWGGE 203 (422)
T ss_pred CCchHHHHHHHHhC--CEEEEeCCH
Confidence 54556888898887 999999996
No 131
>KOG2452|consensus
Probab=99.60 E-value=1e-15 Score=120.78 Aligned_cols=99 Identities=23% Similarity=0.335 Sum_probs=80.3
Q ss_pred hHHHHHHhhhcCCCCCC----CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHH
Q psy1844 2 NAFFAKELTKYQPISED----PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIY 77 (120)
Q Consensus 2 ~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~ 77 (120)
.||||++++|+++...+ -++....+++++|+|||++|+|||||+.++.|+.+++||-- ..
T Consensus 530 ~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~----------------~~ 593 (881)
T KOG2452|consen 530 FRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ----------------VL 593 (881)
T ss_pred HHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH----------------Hh
Confidence 48999999999874422 23445689999999999999999999999999888777311 11
Q ss_pred HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
++. --.|++|+++|.+.-+++.|.+||+++.|.||||++
T Consensus 594 k~~----e~sgvini~~gsgslvg~rls~hpdvrkigftgste 632 (881)
T KOG2452|consen 594 KFA----ELTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTE 632 (881)
T ss_pred hhh----hhcceEEEecCCcchhccccccCCccceeccccchH
Confidence 222 236899999999988999999999999999999974
No 132
>KOG2453|consensus
Probab=99.56 E-value=3.8e-15 Score=113.35 Aligned_cols=118 Identities=19% Similarity=0.300 Sum_probs=99.8
Q ss_pred hHHHHHHhhhcCC-CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH----
Q psy1844 2 NAFFAKELTKYQP-ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT---- 75 (120)
Q Consensus 2 ~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~---- 75 (120)
|+|.....+..++ +.+.+.+++..+..+.|+|++++|+.+|||-..--|.-..+| +||+|+|||++++|+++..
T Consensus 123 cdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtkl 202 (507)
T KOG2453|consen 123 CDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKL 202 (507)
T ss_pred HHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHH
Confidence 4444455555555 346678889999999999999999999999998889888888 8999999999999988775
Q ss_pred HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+.+.|.+-..|++.+...+| +.|.++++..+.++..+.||||++
T Consensus 203 IaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQ 246 (507)
T KOG2453|consen 203 IAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQ 246 (507)
T ss_pred HHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchh
Confidence 55666666899999999999 567999999999999999999975
No 133
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=99.09 E-value=2.6e-10 Score=88.65 Aligned_cols=98 Identities=19% Similarity=0.247 Sum_probs=82.0
Q ss_pred CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHH----hCCCCCcEEEEe
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIE----AGVPPGVVNFVP 94 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~----ag~p~g~~~~i~ 94 (120)
+.+.+.+.++.|+||+++| +..-...+....+-+| .||+||+|.+..+..++..+.+++++ +|+|++.+|.++
T Consensus 103 ~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~aVqli~ 180 (417)
T COG0014 103 PNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADAVQLIE 180 (417)
T ss_pred CCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHHhhhcc
Confidence 5778899999999999999 5555666777777788 79999999999999999988877664 599999999999
Q ss_pred CCChH-HHHHHHhCCCcceEEEecCC
Q psy1844 95 ADGPV-FGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 95 ~~~~~-~~~~l~~~~~i~~v~ftGs~ 119 (120)
..+++ +.+.|..+..+|.|.-.||.
T Consensus 181 ~~~R~~v~~ll~l~~yiD~iIPRGg~ 206 (417)
T COG0014 181 DTDREEVLELLRLDGYIDLVIPRGGA 206 (417)
T ss_pred CCCHHHHHHHHhhcCceeEEEcCCcH
Confidence 85444 56667777779999999985
No 134
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=98.52 E-value=1e-07 Score=83.54 Aligned_cols=86 Identities=19% Similarity=0.142 Sum_probs=63.6
Q ss_pred CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEe
Q psy1844 16 SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVP 94 (120)
Q Consensus 16 ~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~ 94 (120)
.++|+++.+.+...+. |++++|+||| ...+.++.+|| +||.|++||+++++. .+ +.+|..+.+.+
T Consensus 1064 LPGPTGEsN~L~l~~R-G~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~- 1129 (1208)
T PRK11905 1064 LPGPTGESNLLSLHPR-GRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI- 1129 (1208)
T ss_pred CCCCCCcceeEEecCC-ceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc-
Confidence 3567888888888775 9999999999 44677899999 699999999998762 11 12344444333
Q ss_pred CCChHHHHHHHhCCCcceEEEecCC
Q psy1844 95 ADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 95 ~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
..++.+.++++|++|.|+|++
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~ 1150 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDA 1150 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCH
Confidence 233467777889999999985
No 135
>KOG4165|consensus
Probab=98.43 E-value=7e-07 Score=68.46 Aligned_cols=97 Identities=22% Similarity=0.194 Sum_probs=81.5
Q ss_pred CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhccccC-CCeEEeecCCCcHHHHHHHHHHHHHh----CCCCCcEEEEe
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVP 94 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~ala-GN~vv~k~~~~~~~~~~~~~~~l~~a----g~p~g~~~~i~ 94 (120)
..+...+....|+||.++| |..-.-.+....+-|++ ||.+++|....+..+...+.++..++ |+|.+.++++.
T Consensus 100 adgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~ 177 (433)
T KOG4165|consen 100 ADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVT 177 (433)
T ss_pred cCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhhee
Confidence 4556678888999999999 55555555566666774 99999999999999999999998887 78999999999
Q ss_pred CCChHHHHHHHhCCCcceEEEecCC
Q psy1844 95 ADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 95 ~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
. ++|+.+.|..+.-||.|.-.||+
T Consensus 178 s-REev~dLl~ld~~IDLvIPRGSs 201 (433)
T KOG4165|consen 178 S-REEVSDLLKLDDYIDLVIPRGSS 201 (433)
T ss_pred c-HHHHHHHhhhhhheeEEecCCcH
Confidence 7 67788888888889999999986
No 136
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=98.38 E-value=2.4e-06 Score=67.34 Aligned_cols=92 Identities=14% Similarity=0.115 Sum_probs=74.7
Q ss_pred eEEEeccCeEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHHHHHhCCCC----CcEEEE--eCCCh
Q psy1844 25 SLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPP----GVVNFV--PADGP 98 (120)
Q Consensus 25 ~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~----g~~~~i--~~~~~ 98 (120)
.+.++.|.|++++|.|.|-|.......+...|+||..|+|.|+..+..+..+.+.|.+. .|. ..+.++ .+.+.
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCch
Confidence 67788999999999999999998888888888999999999999999999999999887 333 345555 34344
Q ss_pred HHHHHHHhCCCcceEEEecCC
Q psy1844 99 VFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 99 ~~~~~l~~~~~i~~v~ftGs~ 119 (120)
+..+.+. ...|.+...||.
T Consensus 160 ~~~~~~~--~~~D~vv~wGgd 178 (399)
T PF05893_consen 160 ELEEALS--QQADAVVAWGGD 178 (399)
T ss_pred HHHHHHH--HHCCEEEEeCCH
Confidence 5566665 358999999984
No 137
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=95.07 E-value=0.033 Score=50.11 Aligned_cols=49 Identities=16% Similarity=0.186 Sum_probs=37.6
Q ss_pred CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCC
Q psy1844 16 SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDT 68 (120)
Q Consensus 16 ~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~ 68 (120)
.++|++++|.|...+. |+++++.+-.- ..+..+.+++ +||.+|+..++.
T Consensus 1173 LPGPTGE~N~l~l~pR-g~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~ 1222 (1318)
T PRK11809 1173 LPGPTGERNTYTLLPR-ERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDAL 1222 (1318)
T ss_pred CCCCCCCcceeeccCC-CcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCch
Confidence 3667888998888876 99999987332 5677888888 599998875543
No 138
>COG0521 MoaB Molybdopterin biosynthesis enzymes [Coenzyme metabolism]
Probab=80.03 E-value=6.5 Score=27.74 Aligned_cols=49 Identities=20% Similarity=0.194 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHH---HhCCCcceEEEecCC
Q psy1844 70 LLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTI---TASPYLAGINFTGSV 119 (120)
Q Consensus 70 ~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l---~~~~~i~~v~ftGs~ 119 (120)
-.+...+.+.|+++|.......++..+....-..+ +... +|.|..||++
T Consensus 26 D~sG~~l~~~L~~ag~~~~~~~iV~D~~~~I~~~l~~~~~~~-~DvvlttGGT 77 (169)
T COG0521 26 DKSGPLLVELLEEAGHNVAAYTIVPDDKEQIRATLIALIDED-VDVVLTTGGT 77 (169)
T ss_pred ccchhHHHHHHHHcCCccceEEEeCCCHHHHHHHHHHHhcCC-CCEEEEcCCc
Confidence 45778899999999999988888887544444443 3344 9999999986
No 139
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=76.34 E-value=6.9 Score=27.08 Aligned_cols=48 Identities=23% Similarity=0.178 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh---CCCcceEEEecCC
Q psy1844 72 SNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA---SPYLAGINFTGSV 119 (120)
Q Consensus 72 ~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~---~~~i~~v~ftGs~ 119 (120)
....+.+.+++.|+......++..+.++..+.+.+ ..+.|.|..||++
T Consensus 23 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVIttGGt 73 (163)
T TIGR02667 23 SGQYLVERLTEAGHRLADRAIVKDDIYQIRAQVSAWIADPDVQVILITGGT 73 (163)
T ss_pred cHHHHHHHHHHCCCeEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 34578888999999877777776654444555543 3469999999986
No 140
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=74.90 E-value=10 Score=26.88 Aligned_cols=47 Identities=17% Similarity=0.183 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEe------CCChHHHHHHHhCCCcceEEE
Q psy1844 69 ALLSNYTIYKIMIEAGVPPGVVNFVP------ADGPVFGDTITASPYLAGINF 115 (120)
Q Consensus 69 ~~~~~~~~~~~l~~ag~p~g~~~~i~------~~~~~~~~~l~~~~~i~~v~f 115 (120)
++++...+.++++++-..|-++.+=. |.++.+...+..||+|+.+..
T Consensus 36 T~lsG~elV~lIk~a~~DPV~VMfDD~G~~g~G~GE~Al~~v~~h~~IeVLG~ 88 (180)
T PF14097_consen 36 TPLSGEELVELIKQAPHDPVLVMFDDKGFIGEGPGEQALEYVANHPDIEVLGA 88 (180)
T ss_pred CcCCHHHHHHHHHhCCCCCEEEEEeCCCCCCCCccHHHHHHHHcCCCceEEEE
Confidence 78999999999999955555444432 356778899999999987653
No 141
>PF00994 MoCF_biosynth: Probable molybdopterin binding domain; InterPro: IPR001453 Eukaryotic and prokaryotic molybdoenzymes require a molybdopterin cofactor (MoCF) for their activity. The biosynthesis of this cofactor involves a complex multistep enzymatic pathway. One of the eukaryotic proteins involved in this pathway is the Drosophila protein cinnamon [] which is highly similar to gephyrin, a rat microtubule-associated protein which was thought to anchor the glycine receptor to subsynaptic microtubules. Cinnamon and gephyrin are evolutionary related, in their N-terminal half, to the Escherichia coli MoCF biosynthesis proteins mog/chlG and moaB/chlA2 and, in their C-terminal half, to E. coli moeA/chlE.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 3TCR_B 1O8O_B 1O8Q_G 1EAV_D 1O8N_C 1UUX_A 1UUY_A 2G2C_A 2G4R_C 3K6A_F ....
Probab=65.24 E-value=9.8 Score=25.36 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=37.5
Q ss_pred CCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC-CCcceEEEecCC
Q psy1844 66 SDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS-PYLAGINFTGSV 119 (120)
Q Consensus 66 ~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~-~~i~~v~ftGs~ 119 (120)
....-..+..+.+.+++.|+.-....++..+.++..+.+.+. .+.|.|..||++
T Consensus 12 g~~~d~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~D~VittGG~ 66 (144)
T PF00994_consen 12 GQIRDSNGPFLAALLEELGIEVIRYGIVPDDPDAIKEALRRALDRADLVITTGGT 66 (144)
T ss_dssp TSSEBHHHHHHHHHHHHTTEEEEEEEEEESSHHHHHHHHHHHHHTTSEEEEESSS
T ss_pred CceEEhHHHHHHHHHHHcCCeeeEEEEECCCHHHHHHHHHhhhccCCEEEEcCCc
Confidence 334455667899999999997776777776555555555432 345999999975
No 142
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=62.57 E-value=16 Score=24.79 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh---CCCcceEEEecCC
Q psy1844 73 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA---SPYLAGINFTGSV 119 (120)
Q Consensus 73 ~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~---~~~i~~v~ftGs~ 119 (120)
...+.+.+++.|+......++..+.++..+.+.+ ..+-|.|..||++
T Consensus 22 ~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~~~DlVittGG~ 71 (152)
T cd00886 22 GPALVELLEEAGHEVVAYEIVPDDKDEIREALIEWADEDGVDLILTTGGT 71 (152)
T ss_pred HHHHHHHHHHcCCeeeeEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 4468888999998777677766654444444432 2258999999975
No 143
>PRK05066 arginine repressor; Provisional
Probab=62.21 E-value=17 Score=25.18 Aligned_cols=46 Identities=11% Similarity=0.150 Sum_probs=34.1
Q ss_pred HHhhhcccc--CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCC
Q psy1844 48 GNLAYTPAL--MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96 (120)
Q Consensus 48 ~~~~~~~al--aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~ 96 (120)
.+.-..-.+ .+|-+|+|..|. .+..++.++.+.+++++++..+.|+
T Consensus 81 ~l~~~v~~v~~~~~~ivIkT~pG---~A~~va~~iD~~~~~~~IlGTIAGd 128 (156)
T PRK05066 81 PLKNLVLDIDHNDALIVIHTSPG---AAQLIARLLDSLGKAEGILGTIAGD 128 (156)
T ss_pred HHHHHeeeeeecCCEEEEEcCCC---hHHHHHHHHHcCCCCCCeEEEEecC
Confidence 333444444 499999996654 4678899999988999888888774
No 144
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=60.85 E-value=20 Score=23.58 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh-CCCcceEEEecCC
Q psy1844 72 SNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA-SPYLAGINFTGSV 119 (120)
Q Consensus 72 ~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~-~~~i~~v~ftGs~ 119 (120)
....+.+.+++.|+......++..+.++..+.+.+ ..+.|.|..||++
T Consensus 19 ~~~~l~~~l~~~G~~~~~~~~v~Dd~~~I~~~l~~~~~~~dliittGG~ 67 (135)
T smart00852 19 NGPALAELLTELGIEVTRYVIVPDDKEAIKEALREALERADLVITTGGT 67 (135)
T ss_pred cHHHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 44578888999988766666665433333344322 1247899999975
No 145
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=59.24 E-value=13 Score=24.16 Aligned_cols=63 Identities=13% Similarity=0.184 Sum_probs=43.5
Q ss_pred hhccccCCCeEE--eecCCCcHHHHH--HHHHHHHHhC-CCCCcEEEEeCCChHHH---HHHHhCCCcceEEE
Q psy1844 51 AYTPALMGSSVL--WKPSDTALLSNY--TIYKIMIEAG-VPPGVVNFVPADGPVFG---DTITASPYLAGINF 115 (120)
Q Consensus 51 ~~~~alaGN~vv--~k~~~~~~~~~~--~~~~~l~~ag-~p~g~~~~i~~~~~~~~---~~l~~~~~i~~v~f 115 (120)
.+-.++..|.|| +|.++..|.|.. .+.++|...| .+-..++++.. +|.- ....++|-+--++.
T Consensus 7 ~I~~~i~~n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d--~eiR~~lk~~s~WPT~PQLyi 77 (105)
T COG0278 7 RIQKQIKENPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYVDVLQD--PEIRQGLKEYSNWPTFPQLYV 77 (105)
T ss_pred HHHHHhhcCceEEEecCCCCCCCCCccHHHHHHHHHcCCcceeEEeeccC--HHHHhccHhhcCCCCCceeeE
Confidence 344445677777 689999888754 6899999999 68888898875 3333 44556666655553
No 146
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=58.31 E-value=22 Score=23.80 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC-CCcceEEEecCC
Q psy1844 71 LSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS-PYLAGINFTGSV 119 (120)
Q Consensus 71 ~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~-~~i~~v~ftGs~ 119 (120)
.....+.+.+++.|+.-....++..+.++..+.+.+. .+.|.|..||++
T Consensus 27 ~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~DliIttGG~ 76 (144)
T TIGR00177 27 SNGPLLAALLEEAGFNVSRLGIVPDDPEEIREILRKAVDEADVVLTTGGT 76 (144)
T ss_pred CcHHHHHHHHHHCCCeEEEEeecCCCHHHHHHHHHHHHhCCCEEEECCCC
Confidence 3445677788888766554445444333334444332 358888888875
No 147
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=58.01 E-value=21 Score=23.47 Aligned_cols=50 Identities=12% Similarity=0.086 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC-CCcceEEEecCC
Q psy1844 70 LLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS-PYLAGINFTGSV 119 (120)
Q Consensus 70 ~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~-~~i~~v~ftGs~ 119 (120)
-.....+.+++++.|+.-....++..+.++..+.+.+. .+.|.|..||++
T Consensus 18 d~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~i~~~~~~~DlvittGG~ 68 (133)
T cd00758 18 DTNGPALEALLEDLGCEVIYAGVVPDDADSIRAALIEASREADLVLTTGGT 68 (133)
T ss_pred EchHHHHHHHHHHCCCEEEEeeecCCCHHHHHHHHHHHHhcCCEEEECCCC
Confidence 33455788888888876544445544333334443221 237899999875
No 148
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=54.78 E-value=32 Score=23.94 Aligned_cols=50 Identities=18% Similarity=0.100 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh-CCCcceEEEecCC
Q psy1844 70 LLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA-SPYLAGINFTGSV 119 (120)
Q Consensus 70 ~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~-~~~i~~v~ftGs~ 119 (120)
-.....+++.+.+.|+.-....++..+..+..+.+.+ ..+.|.|..||+.
T Consensus 18 d~n~~~l~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~~~~~~dlVIttGG~ 68 (170)
T cd00885 18 DTNAAFLAKELAELGIEVYRVTVVGDDEDRIAEALRRASERADLVITTGGL 68 (170)
T ss_pred EhHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCEEEECCCC
Confidence 3445588899999998876666665443333444432 2358999999985
No 149
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=54.47 E-value=33 Score=21.90 Aligned_cols=42 Identities=19% Similarity=0.189 Sum_probs=26.6
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhC-CCcceEEEecC
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITAS-PYLAGINFTGS 118 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~-~~i~~v~ftGs 118 (120)
++.|++.|++-..+.-++..+......++.+ .+||.|.++-+
T Consensus 35 a~~L~~~Gi~~~~v~~~~~~g~~~i~~~i~~~g~idlVIn~~~ 77 (112)
T cd00532 35 SRVLADAGIPVRAVSKRHEDGEPTVDAAIAEKGKFDVVINLRD 77 (112)
T ss_pred HHHHHHcCCceEEEEecCCCCCcHHHHHHhCCCCEEEEEEcCC
Confidence 3445668888777776654222333444556 78999998643
No 150
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=54.37 E-value=12 Score=24.26 Aligned_cols=58 Identities=12% Similarity=0.141 Sum_probs=33.0
Q ss_pred CCeEEeecCCCcHHHHHHHHHHHH---Hh--CCCCCcEEEEeCCChHHHHHHH-----hCCCcceEEEec
Q psy1844 58 GSSVLWKPSDTALLSNYTIYKIMI---EA--GVPPGVVNFVPADGPVFGDTIT-----ASPYLAGINFTG 117 (120)
Q Consensus 58 GN~vv~k~~~~~~~~~~~~~~~l~---~a--g~p~g~~~~i~~~~~~~~~~l~-----~~~~i~~v~ftG 117 (120)
+..+|+|.|..++.++.++.+.=+ +. .++-..+.++.. +++.+++. .|.....+.+..
T Consensus 20 ~~~~iFKHSt~C~IS~~a~~~~e~~~~~~~~~~~~y~l~v~~~--R~vSn~IAe~~~V~HeSPQ~ili~~ 87 (105)
T PF11009_consen 20 KPVLIFKHSTRCPISAMALREFEKFWEESPDEIPVYYLDVIEY--RPVSNAIAEDFGVKHESPQVILIKN 87 (105)
T ss_dssp SEEEEEEE-TT-HHHHHHHHHHHHHHHHHT----EEEEEGGGG--HHHHHHHHHHHT----SSEEEEEET
T ss_pred CcEEEEEeCCCChhhHHHHHHHHHHhhcCCccceEEEEEEEeC--chhHHHHHHHhCCCcCCCcEEEEEC
Confidence 678899999999999998766533 32 266677777654 55555553 344444555443
No 151
>PRK03604 moaC bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; Provisional
Probab=54.18 E-value=30 Score=26.74 Aligned_cols=51 Identities=22% Similarity=0.122 Sum_probs=36.2
Q ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC--CCcceEEEecCC
Q psy1844 69 ALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS--PYLAGINFTGSV 119 (120)
Q Consensus 69 ~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~--~~i~~v~ftGs~ 119 (120)
.-.....+.+++++.|+......++..+.+...+.+.+. .+.|.|..||++
T Consensus 173 ~Dsn~~~L~~~L~~~G~~v~~~~iVpDD~~~I~~al~~a~~~~~DlIITTGGt 225 (312)
T PRK03604 173 EDRSGKLIVEGLEEAGFEVSHYTIIPDEPAEIAAAVAAWIAEGYALIITTGGT 225 (312)
T ss_pred EEhHHHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHhhhCCCCEEEECCCC
Confidence 355566889999999987766777766544455555443 468999999986
No 152
>COG1438 ArgR Arginine repressor [Transcription]
Probab=50.72 E-value=34 Score=23.66 Aligned_cols=36 Identities=14% Similarity=0.217 Sum_probs=28.6
Q ss_pred CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCC
Q psy1844 57 MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96 (120)
Q Consensus 57 aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~ 96 (120)
.||-+|+|..|. .|..+++++...+.| +.+..+.|+
T Consensus 91 ~~~~ivlkT~PG---~A~~ia~~lD~~~~~-eIlGTIaGd 126 (150)
T COG1438 91 NGNLIVLKTSPG---AAQLIARLLDSLAKD-EILGTIAGD 126 (150)
T ss_pred CCcEEEEEeCCc---hHHHHHHHHHhcCch-hhheeeeCC
Confidence 599999996654 678889999888666 777777764
No 153
>PTZ00129 40S ribosomal protein S14; Provisional
Probab=49.06 E-value=60 Score=22.44 Aligned_cols=85 Identities=15% Similarity=0.029 Sum_probs=47.2
Q ss_pred ccCeEEEEEcCCChhhhhHHhhhcccc----CCCeEEeecCC--CcHHHHH----HHHHHHHHhCCCCCcEEEE------
Q psy1844 30 GLDGFVAAVSPFNFTAIGGNLAYTPAL----MGSSVLWKPSD--TALLSNY----TIYKIMIEAGVPPGVVNFV------ 93 (120)
Q Consensus 30 ~p~Gvv~~i~p~n~P~~~~~~~~~~al----aGN~vv~k~~~--~~~~~~~----~~~~~l~~ag~p~g~~~~i------ 93 (120)
.+.|++-+.+++|..+..+...-..-+ +| .+-+|.+. .+|..++ .+++.+.+.|+..=.+.+-
T Consensus 26 ~~~Gi~hI~as~NNTiItiTD~~G~~~~w~SsG-~~gfKg~r~KsTpyAAq~aa~~~a~k~~~~Gi~~v~V~vr~~gg~~ 104 (149)
T PTZ00129 26 LVFGVAHIFASFNDTFIHVTDLSGRETLVRVTG-GMKVKADRDESSPYAAMMAAQDVAARCKELGINALHIKLRATGGVR 104 (149)
T ss_pred eeEEEEEEEcccCCeEEEEEcccCCEEEEEecC-cceecccccCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEecCCCC
Confidence 356999999999999876555322211 12 24455443 3455554 4555555667766555541
Q ss_pred ---eCCChHHHHHHHhCCCcceEEE
Q psy1844 94 ---PADGPVFGDTITASPYLAGINF 115 (120)
Q Consensus 94 ---~~~~~~~~~~l~~~~~i~~v~f 115 (120)
+|++.+..-.-+....+.....
T Consensus 105 ~kg~GpGr~~airaL~~~glkI~~I 129 (149)
T PTZ00129 105 TKTPGPGAQAALRALARAGLKIGRI 129 (149)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 3566665544444444554443
No 154
>PRK09417 mogA molybdenum cofactor biosynthesis protein MogA; Provisional
Probab=47.81 E-value=60 Score=23.22 Aligned_cols=49 Identities=12% Similarity=0.070 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhCCCCC--cEEEEeCCChHHHHHHHh---CCCcceEEEecCC
Q psy1844 71 LSNYTIYKIMIEAGVPPG--VVNFVPADGPVFGDTITA---SPYLAGINFTGSV 119 (120)
Q Consensus 71 ~~~~~~~~~l~~ag~p~g--~~~~i~~~~~~~~~~l~~---~~~i~~v~ftGs~ 119 (120)
.....+.+.+++.|+... ...++..+.++..+.|.+ ..+.|.|..||++
T Consensus 23 ~ng~~L~~~L~~~G~~g~~v~~~iVpDd~~~I~~aL~~a~~~~~~DlIITTGGt 76 (193)
T PRK09417 23 KGIPALEEWLASALTSPFEIETRLIPDEQDLIEQTLIELVDEMGCDLVLTTGGT 76 (193)
T ss_pred chHHHHHHHHHHcCCCCceEEEEECCCCHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 355678888999876322 124444433333444433 2468999999986
No 155
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=45.25 E-value=26 Score=22.02 Aligned_cols=60 Identities=15% Similarity=0.166 Sum_probs=39.7
Q ss_pred CCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 58 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 58 GN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
|=.+++-.. .+..+...+.+-|++.|++-..=++++. +..+...|.++...+.|++.|+.
T Consensus 30 g~~~~~lTN-ns~~s~~~~~~~L~~~Gi~~~~~~i~ts-~~~~~~~l~~~~~~~~v~vlG~~ 89 (101)
T PF13344_consen 30 GKPVVFLTN-NSSRSREEYAKKLKKLGIPVDEDEIITS-GMAAAEYLKEHKGGKKVYVLGSD 89 (101)
T ss_dssp TSEEEEEES--SSS-HHHHHHHHHHTTTT--GGGEEEH-HHHHHHHHHHHTTSSEEEEES-H
T ss_pred CCCEEEEeC-CCCCCHHHHHHHHHhcCcCCCcCEEECh-HHHHHHHHHhcCCCCEEEEEcCH
Confidence 666665543 3445556677777999999877777776 45677888886778999988863
No 156
>PRK10680 molybdopterin biosynthesis protein MoeA; Provisional
Probab=43.27 E-value=66 Score=25.73 Aligned_cols=47 Identities=9% Similarity=0.095 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh-CCCcceEEEecCC
Q psy1844 73 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA-SPYLAGINFTGSV 119 (120)
Q Consensus 73 ~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~-~~~i~~v~ftGs~ 119 (120)
...+..++++.|+......++..+.++..+.+.+ ..+.|.|..||++
T Consensus 206 ~~~l~a~l~~~G~~~~~~~~v~Dd~~~i~~~l~~a~~~~DlvIttGG~ 253 (411)
T PRK10680 206 RLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGV 253 (411)
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHhccCCCEEEEcCCC
Confidence 3367778899888766666665443333444433 2458999999985
No 157
>PF08002 DUF1697: Protein of unknown function (DUF1697); InterPro: IPR012545 This family contains many hypothetical bacterial proteins.; PDB: 2HIY_B.
Probab=42.53 E-value=75 Score=21.27 Aligned_cols=51 Identities=22% Similarity=0.193 Sum_probs=28.3
Q ss_pred ccc-CCCeEEeecCCCcHHHHHHHHHHHHHh-CCCCCcEEEEeCCChHHHHHHHhCC
Q psy1844 54 PAL-MGSSVLWKPSDTALLSNYTIYKIMIEA-GVPPGVVNFVPADGPVFGDTITASP 108 (120)
Q Consensus 54 ~al-aGN~vv~k~~~~~~~~~~~~~~~l~~a-g~p~g~~~~i~~~~~~~~~~l~~~~ 108 (120)
.-| .||.|.- +..........+.+.+++. |++..++ +.+. ++..+.+.++|
T Consensus 38 Tyi~SGNvvf~-~~~~~~~l~~~ie~~l~~~fG~~v~v~-vrs~--~el~~i~~~nP 90 (137)
T PF08002_consen 38 TYIQSGNVVFE-SDRDPAELAAKIEKALEERFGFDVPVI-VRSA--EELRAIIAANP 90 (137)
T ss_dssp EETTTTEEEEE-ESS-HHHHHHHHHHHHHHH-TT---EE-EEEH--HHHHHHHTT--
T ss_pred EEEeeCCEEEe-cCCChHHHHHHHHHHHHHhcCCCeEEE-EeeH--HHHHHHHHHCC
Confidence 345 4998777 6667777777888887765 8887766 3332 34444444433
No 158
>PRK03670 competence damage-inducible protein A; Provisional
Probab=41.78 E-value=63 Score=24.10 Aligned_cols=48 Identities=15% Similarity=0.067 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh--CCCcceEEEecCC
Q psy1844 72 SNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA--SPYLAGINFTGSV 119 (120)
Q Consensus 72 ~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~--~~~i~~v~ftGs~ 119 (120)
.+..+++.+.+.|+.-....++..+..+..+.+.. ....|.|+.||+.
T Consensus 21 N~~~la~~L~~~G~~v~~~~iV~Dd~~~I~~~l~~a~~~~~DlVIttGGl 70 (252)
T PRK03670 21 NSAFIAQKLTEKGYWVRRITTVGDDVEEIKSVVLEILSRKPEVLVISGGL 70 (252)
T ss_pred hHHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHHhhCCCCEEEECCCc
Confidence 34478888999999876666665544444555533 2246999999984
No 159
>PRK00441 argR arginine repressor; Provisional
Probab=40.79 E-value=87 Score=21.41 Aligned_cols=48 Identities=4% Similarity=-0.035 Sum_probs=33.8
Q ss_pred hhhHHhhhcccc-C-CCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCC
Q psy1844 45 AIGGNLAYTPAL-M-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96 (120)
Q Consensus 45 ~~~~~~~~~~al-a-GN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~ 96 (120)
+...+.-..-.+ . +|-+|+|..|.. +..++.++.+.++|. ++..+.|+
T Consensus 75 l~~~~~~~v~~v~~~~~lvvIkT~pG~---A~~va~~iD~~~~~e-I~GTiAGd 124 (149)
T PRK00441 75 LVNIFSNTVISVENVDNMIVIKTISGS---ASAAAEAIDTLNFDG-IAGTIAGD 124 (149)
T ss_pred HHHHHHHHeeeEeecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 444445455555 4 999999966554 677888899887766 77777664
No 160
>TIGR01529 argR_whole arginine repressor. This model includes most members of the arginine-responsive transcriptional regulator family ArgR. This hexameric protein binds DNA at its amino end to repress arginine biosyntheis or activate arginine catabolism. Some species have several ArgR paralogs. In a neighbor-joining tree, some of these paralogous sequences show long branches and differ significantly in an otherwise well-conserved C-terminal region motif GT[VIL][AC]GDDT. These paralogs are excluded from the seed and score in the gray zone of this model, between trusted and noise cutoffs.
Probab=40.40 E-value=90 Score=21.18 Aligned_cols=48 Identities=6% Similarity=0.042 Sum_probs=33.8
Q ss_pred hhhHHhhhcccc-C-CCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCC
Q psy1844 45 AIGGNLAYTPAL-M-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96 (120)
Q Consensus 45 ~~~~~~~~~~al-a-GN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~ 96 (120)
+...+.-..-.+ . +|-+|+|..|.. +..++.++.+.++|. ++..+.|+
T Consensus 73 l~~~~~~~v~~v~~~~~~vvikT~pG~---A~~va~~iD~~~~~~-i~GtiAGd 122 (146)
T TIGR01529 73 LKRLLKNLVLSIDRAGNLIVIRTKPGE---ASVIANLLDRLDKDE-ILGTIAGD 122 (146)
T ss_pred HHHHHHHHeeEeeccCCEEEEEeCCCc---HHHHHHHHHhCCCCc-eEEEEecC
Confidence 444444455555 3 999999976555 677888999887744 88877774
No 161
>PRK13769 histidinol dehydrogenase; Provisional
Probab=38.21 E-value=1.2e+02 Score=24.04 Aligned_cols=44 Identities=11% Similarity=-0.013 Sum_probs=30.5
Q ss_pred CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEee
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWK 64 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k 64 (120)
.++...-.+..|+--++++.|.-||...+| ...||- ||..=|+-
T Consensus 82 ~~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM-~~iPAkvAGV~~Iv~ 126 (368)
T PRK13769 82 YGGVLRSVFWKPVRRAALYVPARYVSTLVM-LAVPARAAGVEEIYV 126 (368)
T ss_pred CCCeEEEEEEeeeeeeEEEeccchHHHHHH-hhccHhhcCCCeEEE
Confidence 355667778889999999999766655444 455555 86655444
No 162
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=37.74 E-value=41 Score=20.70 Aligned_cols=43 Identities=19% Similarity=0.084 Sum_probs=24.1
Q ss_pred HHHHHHHhCCC-CCcEEEEeCC-ChH---HHHHHHhCCCcceEEEecC
Q psy1844 76 IYKIMIEAGVP-PGVVNFVPAD-GPV---FGDTITASPYLAGINFTGS 118 (120)
Q Consensus 76 ~~~~l~~ag~p-~g~~~~i~~~-~~~---~~~~l~~~~~i~~v~ftGs 118 (120)
-++.|++.|++ ..+.+.+..+ ..+ ....++...+||+|.++-+
T Consensus 22 Ta~~L~~~Gi~~~~v~~~~~~~~~~~g~~~i~~~i~~~~IdlVIn~~~ 69 (95)
T PF02142_consen 22 TAKFLKEHGIEVTEVVNKIGEGESPDGRVQIMDLIKNGKIDLVINTPY 69 (95)
T ss_dssp HHHHHHHTT--EEECCEEHSTG-GGTHCHHHHHHHHTTSEEEEEEE--
T ss_pred HHHHHHHcCCCceeeeeecccCccCCchhHHHHHHHcCCeEEEEEeCC
Confidence 34667788999 6666665543 122 1344455667999998754
No 163
>PF04398 DUF538: Protein of unknown function, DUF538; InterPro: IPR007493 This family consists of several plant proteins of unknown function.; PDB: 1YDU_A.
Probab=37.24 E-value=18 Score=23.52 Aligned_cols=15 Identities=33% Similarity=0.840 Sum_probs=10.4
Q ss_pred HHHHHHHhCCCCCcE
Q psy1844 76 IYKIMIEAGVPPGVV 90 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~ 90 (120)
..++|++.|+|.|++
T Consensus 2 ayelL~~~glP~GLL 16 (110)
T PF04398_consen 2 AYELLEEYGLPRGLL 16 (110)
T ss_dssp -HHHHHHHS-TT-TT
T ss_pred HHHhHHHcCCCCCcC
Confidence 468899999999975
No 164
>PF12617 LdpA_C: Iron-Sulfur binding protein C terminal; InterPro: IPR021039 This entry represents the C-terminal region of the iron-sulphur protein LdpA (Light dependent period), which is found in phototropic organisms. LdpA was originally identified in cyanobacteria where it is involved in light-dependent modulation of the circadian clock. The presence of iron-sulphur clusters on LdpA suggests that it may modulate the circadian clock as an indirect function of light intensity by sensing changes in cellular physiology [].
Probab=35.65 E-value=1.2e+02 Score=21.65 Aligned_cols=85 Identities=16% Similarity=0.256 Sum_probs=57.3
Q ss_pred CeEEEEEcCCChhhhhHHhhhcccc-C-CCeEEeecC---------CCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHH
Q psy1844 32 DGFVAAVSPFNFTAIGGNLAYTPAL-M-GSSVLWKPS---------DTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVF 100 (120)
Q Consensus 32 ~Gvv~~i~p~n~P~~~~~~~~~~al-a-GN~vv~k~~---------~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~ 100 (120)
+..+.+=.|-.--+..-++.+-..| . ++..++-.. ..|...+..+.+.+..+ -|+|.+|+--|.+..+
T Consensus 37 Lk~lAiSc~~~~~li~~L~~~~~~l~~l~~~~iWQ~DGRPMSGDIG~GTt~aaV~l~~~v~~~-~~PG~vQLAGGTN~~T 115 (183)
T PF12617_consen 37 LKLLAISCPDGEGLIDYLWQLYEILRPLPCPLIWQLDGRPMSGDIGDGTTRAAVKLAQKVLSA-KPPGPVQLAGGTNAHT 115 (183)
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHhccCCCeeEeeCCcccCCCCCCcHHHHHHHHHHHHhhc-CCCCceEecCccchhH
Confidence 4555555555444666666666666 3 777777633 33455566666666666 4999999988866667
Q ss_pred HHHHHh----------CCCcceEEEec
Q psy1844 101 GDTITA----------SPYLAGINFTG 117 (120)
Q Consensus 101 ~~~l~~----------~~~i~~v~ftG 117 (120)
.+.|.. +..+.+|.|-|
T Consensus 116 v~~Lk~~gl~~~~~~~~~~iaGVAyGs 142 (183)
T PF12617_consen 116 VEKLKQMGLLQPPPSSSAFIAGVAYGS 142 (183)
T ss_pred HHHHHHccCcCCCccccCCCceeeehH
Confidence 788777 66788888865
No 165
>PRK01215 competence damage-inducible protein A; Provisional
Probab=35.15 E-value=81 Score=23.61 Aligned_cols=48 Identities=13% Similarity=0.012 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC-CCcceEEEecCC
Q psy1844 72 SNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS-PYLAGINFTGSV 119 (120)
Q Consensus 72 ~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~-~~i~~v~ftGs~ 119 (120)
.+.++++.+.+.|+.-....++..+.++..+.+..- .+.|.|..||+.
T Consensus 24 n~~~l~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~a~~~~DlVIttGG~ 72 (264)
T PRK01215 24 NASWIARRLTYLGYTVRRITVVMDDIEEIVSAFREAIDRADVVVSTGGL 72 (264)
T ss_pred hHHHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 455788889999988766665554333333443221 235999999975
No 166
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=35.14 E-value=1.3e+02 Score=21.60 Aligned_cols=51 Identities=6% Similarity=-0.003 Sum_probs=37.5
Q ss_pred CCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCC---CcceEEEecC
Q psy1844 67 DTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASP---YLAGINFTGS 118 (120)
Q Consensus 67 ~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~---~i~~v~ftGs 118 (120)
+..+.-.....+.++++|+. +-++++.|+..+....|..+. .+|.|+.-+.
T Consensus 77 E~~~~~~~~A~~~~~~ag~~-~~I~~~~gda~~~l~~l~~~~~~~~fD~VFiDa~ 130 (205)
T PF01596_consen 77 EIDPERAEIARENFRKAGLD-DRIEVIEGDALEVLPELANDGEEGQFDFVFIDAD 130 (205)
T ss_dssp ESSHHHHHHHHHHHHHTTGG-GGEEEEES-HHHHHHHHHHTTTTTSEEEEEEEST
T ss_pred cCcHHHHHHHHHHHHhcCCC-CcEEEEEeccHhhHHHHHhccCCCceeEEEEccc
Confidence 34566677888889999985 679999997766667777654 5999987553
No 167
>PRK09607 rps11p 30S ribosomal protein S11P; Reviewed
Probab=34.20 E-value=1.5e+02 Score=20.05 Aligned_cols=63 Identities=16% Similarity=0.051 Sum_probs=40.9
Q ss_pred ccCeEEEEEcCCChhhhhHHhhhcc---cc-CCCeEEeecC-CCcHHHHH----HHHHHHHHhCCCCCcEEE
Q psy1844 30 GLDGFVAAVSPFNFTAIGGNLAYTP---AL-MGSSVLWKPS-DTALLSNY----TIYKIMIEAGVPPGVVNF 92 (120)
Q Consensus 30 ~p~Gvv~~i~p~n~P~~~~~~~~~~---al-aGN~vv~k~~-~~~~~~~~----~~~~~l~~ag~p~g~~~~ 92 (120)
.+.|++-+.+++|..+..+...-.. +. .|-.+..|.+ ..+|..++ .+.+.+.+.|+..=.+.+
T Consensus 7 ~~~gi~hI~as~NNTivtvTD~~G~~~~~~~S~G~~g~kg~kK~TpyAAq~aae~~~~~~~~~Gi~~v~v~v 78 (132)
T PRK09607 7 EKWGIAHIYASFNNTIITITDLTGAETIAKSSGGMVVKADRDESSPYAAMQAAEKAAEDAKEKGITGVHIKV 78 (132)
T ss_pred ceeeEEEEEcccCCeEEEEEcCCCCEEEEEecCcceeeCCCccCCHHHHHHHHHHHHHHHHHcCCcEEEEEE
Confidence 3579999999999998877775442 22 3556677766 44555555 455555566776655544
No 168
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=33.57 E-value=81 Score=26.89 Aligned_cols=49 Identities=16% Similarity=0.129 Sum_probs=36.9
Q ss_pred CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhccccC-CCeEEeecCCCc
Q psy1844 17 EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTA 69 (120)
Q Consensus 17 ~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~ala-GN~vv~k~~~~~ 69 (120)
+++.++++.|...++ |-++++.. +....+..++..++ ||.+++-+....
T Consensus 630 pGptGErN~~~l~pr-~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~ 679 (769)
T COG4230 630 PGPTGERNTYTLHPR-GRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL 679 (769)
T ss_pred CCCcccceeecccCC-ccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH
Confidence 556788888888876 88888855 45566777888885 999998765443
No 169
>PRK03341 arginine repressor; Provisional
Probab=33.36 E-value=1.3e+02 Score=21.07 Aligned_cols=48 Identities=13% Similarity=0.029 Sum_probs=32.4
Q ss_pred hhhHHhhhcccc--CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCC
Q psy1844 45 AIGGNLAYTPAL--MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96 (120)
Q Consensus 45 ~~~~~~~~~~al--aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~ 96 (120)
+...+.-..-.+ .+|-+|+|..|.. +..++.++.+.++|. ++..|.|+
T Consensus 92 l~~~~~~~v~sv~~~~~lvVIkT~pG~---A~~va~~iD~~~~~e-IlGTIAGD 141 (168)
T PRK03341 92 LRRLLGELLVSADASANLAVLRTPPGA---AQYLASAIDRAALPE-VVGTIAGD 141 (168)
T ss_pred HHHHHHHHeEEEeeeCCEEEEEcCCCh---HHHHHHHHHhCCCCC-eEEEeecC
Confidence 333444444455 4999999966544 677888888887765 77766663
No 170
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=33.28 E-value=1.8e+02 Score=21.57 Aligned_cols=49 Identities=12% Similarity=0.026 Sum_probs=35.4
Q ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC----CCcceEEEecC
Q psy1844 69 ALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS----PYLAGINFTGS 118 (120)
Q Consensus 69 ~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~----~~i~~v~ftGs 118 (120)
.+.......+.++++|+. +-+.++.|+..+....|..+ ..+|.|++-+.
T Consensus 113 ~~~~~~~Ar~~~~~ag~~-~~I~~~~G~a~e~L~~l~~~~~~~~~fD~iFiDad 165 (247)
T PLN02589 113 NRENYELGLPVIQKAGVA-HKIDFREGPALPVLDQMIEDGKYHGTFDFIFVDAD 165 (247)
T ss_pred CHHHHHHHHHHHHHCCCC-CceEEEeccHHHHHHHHHhccccCCcccEEEecCC
Confidence 355556677788899986 56899999766666666542 46999988654
No 171
>PRK04280 arginine repressor; Provisional
Probab=32.06 E-value=1e+02 Score=21.04 Aligned_cols=49 Identities=8% Similarity=0.020 Sum_probs=33.9
Q ss_pred hhhhHHhhhcccc-C-CCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCC
Q psy1844 44 TAIGGNLAYTPAL-M-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96 (120)
Q Consensus 44 P~~~~~~~~~~al-a-GN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~ 96 (120)
.+...+.-..-.+ . +|-+|+|..|. .+..++.++.+.++|. ++..+.|+
T Consensus 74 ~l~~~~~~~v~sv~~~~~~vvikT~pG---~A~~va~~iD~~~~~e-I~GTIAGd 124 (148)
T PRK04280 74 KLKRALMDSFVKIDGAGNLLVLKTLPG---NANSIGALIDNLDWDE-ILGTICGD 124 (148)
T ss_pred HHHHHHHHHEEEEeeeCCEEEEEcCCC---hHHHHHHHHHhCCCCC-eEEEEecC
Confidence 3444455555555 4 99999996654 4677888888887766 77777664
No 172
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=31.86 E-value=1e+02 Score=23.24 Aligned_cols=46 Identities=17% Similarity=0.099 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCCChHHHHHH-HhCCCcceEEEecC
Q psy1844 73 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTI-TASPYLAGINFTGS 118 (120)
Q Consensus 73 ~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l-~~~~~i~~v~ftGs 118 (120)
+.++++.|.+.|++=....++..+-.+..+.+ ....+.|.|++||+
T Consensus 23 a~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r~D~vI~tGG 69 (255)
T COG1058 23 AAFLADELTELGVDLARITTVGDNPDRIVEALREASERADVVITTGG 69 (255)
T ss_pred HHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhCCCEEEECCC
Confidence 45789999999999888877765433333332 12233899999997
No 173
>cd03522 MoeA_like MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.
Probab=31.70 E-value=99 Score=23.85 Aligned_cols=50 Identities=16% Similarity=0.076 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC--CCcceEEEecCC
Q psy1844 70 LLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS--PYLAGINFTGSV 119 (120)
Q Consensus 70 ~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~--~~i~~v~ftGs~ 119 (120)
-.....+.+.+++.|+.--...++..+.++..+.+.+. ...|.|..|||+
T Consensus 178 D~~~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~ai~~~~~~g~DlIItTGGt 229 (312)
T cd03522 178 DKFGPVLRARLAALGVELVEQVIVPHDEAAIAAAIAEALEAGAELLILTGGA 229 (312)
T ss_pred EhHHHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence 33455778888888876555556554433344444332 237999999985
No 174
>cd00887 MoeA MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.
Probab=31.46 E-value=54 Score=25.86 Aligned_cols=49 Identities=16% Similarity=0.257 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC-CCcceEEEecCC
Q psy1844 71 LSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS-PYLAGINFTGSV 119 (120)
Q Consensus 71 ~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~-~~i~~v~ftGs~ 119 (120)
.....+..++++.|+......++..+..+..+.|.+- .+.|.|..||++
T Consensus 195 sn~~~l~~~l~~~G~~~~~~~~v~Dd~~~i~~~l~~a~~~~DliittGG~ 244 (394)
T cd00887 195 SNSYMLAALLRELGAEVVDLGIVPDDPEALREALEEALEEADVVITSGGV 244 (394)
T ss_pred ChHHHHHHHHHHCCCEEEEeceeCCCHHHHHHHHHHHhhCCCEEEEeCCC
Confidence 3445678888888877666666654433344444332 238999999975
No 175
>COG2082 CobH Precorrin isomerase [Coenzyme metabolism]
Probab=30.71 E-value=2.2e+02 Score=20.86 Aligned_cols=53 Identities=23% Similarity=0.421 Sum_probs=36.6
Q ss_pred CCeEEeecCCCcHHHHHHHHHHHHHh--------CCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecC
Q psy1844 58 GSSVLWKPSDTALLSNYTIYKIMIEA--------GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118 (120)
Q Consensus 58 GN~vv~k~~~~~~~~~~~~~~~l~~a--------g~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs 118 (120)
|+++++-. .+|-....+++++++. |+|-|.++ -.+.-+.|.+.+ |..|+..|.
T Consensus 128 ~~~ivvIG--NAPTAL~~l~elie~~~~~palvIg~PVGFv~-----AaesKe~L~~~~-iP~itv~G~ 188 (210)
T COG2082 128 GGAIVVIG--NAPTALFELLELIEEGGIKPALVIGVPVGFVG-----AAESKEALRESP-IPYITVRGR 188 (210)
T ss_pred CceEEEEe--CCHHHHHHHHHHHHccCCCCcEEEEcCCcccc-----hHHHHHHHHhCC-CCeEEEecC
Confidence 45677764 3566677899999884 45555443 356667777766 999998875
No 176
>COG2006 Uncharacterized conserved protein [Function unknown]
Probab=29.69 E-value=88 Score=24.02 Aligned_cols=31 Identities=32% Similarity=0.334 Sum_probs=24.0
Q ss_pred CCeEEeecCC-----------CcHHHHHHHHHHHHHhCCCCC
Q psy1844 58 GSSVLWKPSD-----------TALLSNYTIYKIMIEAGVPPG 88 (120)
Q Consensus 58 GN~vv~k~~~-----------~~~~~~~~~~~~l~~ag~p~g 88 (120)
||.|++||.- ..|.+-..++++++++|.-+=
T Consensus 37 G~~VlLKPN~lta~ppe~~~tThPevv~Av~~~v~e~g~ep~ 78 (293)
T COG2006 37 GDRVLLKPNLLTADPPEAPCTTHPEVVAAVAEVVKEAGGEPV 78 (293)
T ss_pred CCEEEecCccccCCCCCCCCccCHHHHHHHHHHHHHhCCcce
Confidence 9999999872 236777889999999965443
No 177
>PF06463 Mob_synth_C: Molybdenum Cofactor Synthesis C; InterPro: IPR010505 The majority of molybdenum-containing enzymes utilise a molybdenum cofactor (MoCF or Moco) consisting of a Mo atom coordinated via a cis-dithiolene moiety to molybdopterin (MPT). MoCF is ubiquitous in nature, and the pathway for MoCF biosynthesis is conserved in all three domains of life. MoCF-containing enzymes function as oxidoreductases in carbon, nitrogen, and sulphur metabolism [, ]. In Escherichia coli, biosynthesis of MoCF is a three stage process. It begins with the MoaA and MoaC conversion of GTP to the meta-stable pterin intermediate precursor Z. The second stage involves MPT synthase (MoaD and MoaE), which converts precursor Z to MPT; MoeB is involved in the recycling of MPT synthase. The final step in MoCF synthesis is the attachment of mononuclear Mo to MPT, a process that requires MoeA and which is enhanced by MogA in an Mg2 ATP-dependent manner []. MoCF is the active co-factor in eukaryotic and some prokaryotic molybdo-enzymes, but the majority of bacterial enzymes requiring MoCF, need a modification of MTP for it to be active; MobA is involved in the attachment of a nucleotide monophosphate to MPT resulting in the MGD co-factor, the active co-factor for most prokaryotic molybdo-enzymes. Bacterial two-hybrid studies have revealed the close interactions between MoeA, MogA, and MobA in the synthesis of MoCF []. Moreover the close functional association of MoeA and MogA in the synthesis of MoCF is supported by fact that the known eukaryotic homologues to MoeA and MogA exist as fusion proteins: CNX1 (Q39054 from SWISSPROT) of Arabidopsis thaliana (Mouse-ear cress), mammalian Gephryin (e.g. Q9NQX3 from SWISSPROT) and Drosophila melanogaster (Fruit fly) Cinnamon (P39205 from SWISSPROT) []. This entry represents MoaA, which belongs to a family of enzymes involved in the synthesis of metallo-cofactors (IPR000385 from INTERPRO). Each subunit of the MoaA dimer is comprised of an N-terminal SAM domain (IPR007197 from INTERPRO) that contains the [4Fe-4S] cluster typical for this family of enzymes, as well as an additional [4Fe-4S] cluster in the C-terminal domain that is unique to MoaA proteins []. The unique Fe site of the C-terminal [4Fe-4S] cluster is thought to be involved in the binding and activation of 5'-GTP. Mutations in the human MoCF biosynthesis proteins MOCS1, MOCS2 or GEPH cause MoCF Deficiency type A (MOCOD), causing the loss of activity of MoCF-containing enzymes, resulting in neurological abnormalities and death [].; GO: 0051539 4 iron, 4 sulfur cluster binding, 0006777 Mo-molybdopterin cofactor biosynthetic process, 0019008 molybdopterin synthase complex; PDB: 2FB2_A 2FB3_A 1TV8_B 1TV7_A.
Probab=29.57 E-value=74 Score=21.01 Aligned_cols=64 Identities=19% Similarity=0.163 Sum_probs=33.3
Q ss_pred CCCcceEEEeccCeEEEEEcCCChhhhhHHhh--------hcccc-CCCeEEeecCCCcHHHHHHHHHHHHHh
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLA--------YTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA 83 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~--------~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~a 83 (120)
......|....-.|.|++|+|.+.||-...+. +-++| ..+.+=+|+.-....+-..+.++++++
T Consensus 46 ~~pa~~y~~~g~~g~vG~I~~~s~~FC~~CNRiRlTsdG~l~~CL~~~~~idl~~~lr~~~~~~~l~~~i~~a 118 (128)
T PF06463_consen 46 NGPARYYRIPGGKGRVGFISPVSNPFCSSCNRIRLTSDGKLKPCLFSNDGIDLRPLLRSGASDEELKEAIREA 118 (128)
T ss_dssp T-SSEEEEETTT--EEEEE-TTTS--GGG--EEEE-TTSEEESSSS-SS-EEHHHHHHTT--HHHHHHHHHHH
T ss_pred CCcceEEEECCCCcEEEEEeCCCCCCCCcCCEEEEccCccEEEcccCCCCcChhHHhhCCCCHHHHHHHHHHH
Confidence 45566677766667899999999998665543 56666 455555564444443444566666554
No 178
>PF14974 DUF4511: Domain of unknown function (DUF4511)
Probab=29.39 E-value=15 Score=23.86 Aligned_cols=32 Identities=13% Similarity=0.144 Sum_probs=27.4
Q ss_pred CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCC
Q psy1844 57 MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 88 (120)
Q Consensus 57 aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g 88 (120)
+||-++.+...--|.....-.+++++.|||++
T Consensus 34 agndm~k~mq~v~Pva~qiq~~VIk~yGF~~~ 65 (105)
T PF14974_consen 34 AGNDMLKMMQFVFPVATQIQMEVIKKYGFPES 65 (105)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 48888777777779999999999999999975
No 179
>PLN02699 Bifunctional molybdopterin adenylyltransferase/molybdopterin molybdenumtransferase
Probab=29.31 E-value=91 Score=26.62 Aligned_cols=47 Identities=9% Similarity=0.038 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC--CCcceEEEecCC
Q psy1844 73 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS--PYLAGINFTGSV 119 (120)
Q Consensus 73 ~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~--~~i~~v~ftGs~ 119 (120)
...+.+.+++.|+....+.++..+.++..+.|.+. .+.|.|..||++
T Consensus 211 ~~~L~a~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~DlvItTGGt 259 (659)
T PLN02699 211 RAMLLAAAIQQQCKVVDLGIARDDEEELERILDEAISSGVDILLTSGGV 259 (659)
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 44788889999877666666654433344544432 358999999985
No 180
>COG0100 RpsK Ribosomal protein S11 [Translation, ribosomal structure and biogenesis]
Probab=28.85 E-value=81 Score=21.29 Aligned_cols=72 Identities=14% Similarity=0.022 Sum_probs=45.4
Q ss_pred ccCeEEEEEcCCChhhhhHHhhhcccc----CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEe-CCChHH
Q psy1844 30 GLDGFVAAVSPFNFTAIGGNLAYTPAL----MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVP-ADGPVF 100 (120)
Q Consensus 30 ~p~Gvv~~i~p~n~P~~~~~~~~~~al----aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~-~~~~~~ 100 (120)
...|++-+-..+|..+......-...+ +|...+-+.-..+|..++..++.+. |.|+-.--+.+-- |+++++
T Consensus 16 i~~GvahI~asfNNTivtitD~~Gn~i~wassG~~gfk~~rk~tpyAA~~aa~~aa~~a~e~Gi~~v~v~vkgpG~Grea 95 (129)
T COG0100 16 IADGVAHIHASFNNTIVTITDLTGNVIIWASSGGMGFKGSRKSTPYAAQLAAEDAAKKAKEHGIKSVEVKVKGPGPGREA 95 (129)
T ss_pred cccceEEEEcccCCcEEEecCCCCCEEEEEecCCceEcCCCCCCHHHHHHHHHHHHHHHHHhCccEEEEEEECCCCcHHH
Confidence 567999999999999877766544443 2555555555777888877666555 4455544444322 455554
Q ss_pred H
Q psy1844 101 G 101 (120)
Q Consensus 101 ~ 101 (120)
.
T Consensus 96 A 96 (129)
T COG0100 96 A 96 (129)
T ss_pred H
Confidence 4
No 181
>PRK14690 molybdopterin biosynthesis protein MoeA; Provisional
Probab=28.80 E-value=92 Score=24.98 Aligned_cols=48 Identities=13% Similarity=0.091 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC-CCcceEEEecCC
Q psy1844 72 SNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS-PYLAGINFTGSV 119 (120)
Q Consensus 72 ~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~-~~i~~v~ftGs~ 119 (120)
....+...+++.|+......++..+.++..+.+.+. .+.|.|..||++
T Consensus 221 N~~~L~a~l~~~G~~v~~~~~v~Dd~~~i~~~l~~a~~~~DlIItTGG~ 269 (419)
T PRK14690 221 NRPMLLALARRWGHAPVDLGRVGDDRAALAARLDRAAAEADVILTSGGA 269 (419)
T ss_pred HHHHHHHHHHHCCCEEEEEeeeCCCHHHHHHHHHHhCccCCEEEEcCCc
Confidence 344788889999877655555554333333444322 357899999975
No 182
>COG1736 DPH2 Diphthamide synthase subunit DPH2 [Translation, ribosomal structure and biogenesis]
Probab=28.77 E-value=1.7e+02 Score=23.09 Aligned_cols=65 Identities=17% Similarity=0.078 Sum_probs=45.7
Q ss_pred hcccc-CCCeEE---eecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 52 YTPAL-MGSSVL---WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 52 ~~~al-aGN~vv---~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
+.-|+ ++.-.| .|+....+..+..+.+.++++|.+.=++-+ + .-.-+.|.+-..+|..++||.++
T Consensus 231 i~~a~~a~~~giiv~tk~gQ~r~~~~~~l~k~~~~~g~~~~li~~--~--~i~p~~L~~f~~iD~~v~taCPR 299 (347)
T COG1736 231 ISKALDAKSFGIIVSTKGGQRRLEVARELVKLLKEAGKEVYLIVV--D--EISPDKLANFDDIDAFVNTACPR 299 (347)
T ss_pred HHHHhcCCeEEEEEecccccCcHHHHHHHHHHHHHcCCceEEEEe--c--CCCHHHHhcccceeEEEEecCCC
Confidence 44555 544444 467788899999999999999877665433 2 22346666666899999999875
No 183
>PF02375 JmjN: jmjN domain; InterPro: IPR003349 Jumonji protein is required for neural tube formation in mice [].There is evidence of domain swapping within the jumonji family of transcription factors []. This domain is often associated with JmjC (see IPR003347 from INTERPRO).; PDB: 2XML_A 2W2I_C 3DXT_A 3DXU_A 2OX0_B 2OQ6_B 2WWJ_A 2Q8D_A 3PDQ_A 2YBK_A ....
Probab=28.47 E-value=42 Score=17.18 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=11.6
Q ss_pred HHHHHHHhCCCCCcEEEEe
Q psy1844 76 IYKIMIEAGVPPGVVNFVP 94 (120)
Q Consensus 76 ~~~~l~~ag~p~g~~~~i~ 94 (120)
..+-+++.|...|++.+++
T Consensus 16 yi~~i~~~g~~~Gi~KIvP 34 (34)
T PF02375_consen 16 YISSIEPEGEKYGICKIVP 34 (34)
T ss_dssp HHHHHHHTTGGGSEEEE--
T ss_pred HHHHHHHHHHHCCEEEecC
Confidence 4444666777888887763
No 184
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=28.15 E-value=1.1e+02 Score=19.08 Aligned_cols=39 Identities=31% Similarity=0.276 Sum_probs=25.3
Q ss_pred HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEe
Q psy1844 77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFT 116 (120)
Q Consensus 77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ft 116 (120)
++.|++.|++-..++.+.+...+..+. +.+.++|.|..+
T Consensus 36 ~~~l~~~gi~~~~v~~~~~~~~~i~~~-i~~~~id~vIn~ 74 (110)
T cd01424 36 AKYLQEAGIPVEVVNKVSEGRPNIVDL-IKNGEIQLVINT 74 (110)
T ss_pred HHHHHHcCCeEEEEeecCCCchhHHHH-HHcCCeEEEEEC
Confidence 344666788877777775433444444 456689999875
No 185
>PRK00549 competence damage-inducible protein A; Provisional
Probab=26.87 E-value=1.5e+02 Score=23.76 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=37.5
Q ss_pred CCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh-CCCcceEEEecCC
Q psy1844 58 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA-SPYLAGINFTGSV 119 (120)
Q Consensus 58 GN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~-~~~i~~v~ftGs~ 119 (120)
||-++ .....-..+.++++.+.+.|+.-....++..+.++..+.+.. ..+.|.|..||+.
T Consensus 9 G~Ell--~G~i~DtN~~~L~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~a~~~~DlVItTGGl 69 (414)
T PRK00549 9 GTELL--LGQIVNTNAQFLSEKLAELGIDVYHQTVVGDNPERLLSALEIAEERSDLIITTGGL 69 (414)
T ss_pred ccccc--CCceeEhhHHHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHhccCCCEEEECCCC
Confidence 66544 122223345578899999998877666665544434444432 3468999999974
No 186
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=26.86 E-value=1.1e+02 Score=24.69 Aligned_cols=65 Identities=15% Similarity=-0.012 Sum_probs=31.7
Q ss_pred CCCcceEEEeccCeEEEEEcC---CChhhhhHHhhhcccc-CCCeE--EeecCCCcHHHHHHHHHHHHHhCC
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSP---FNFTAIGGNLAYTPAL-MGSSV--LWKPSDTALLSNYTIYKIMIEAGV 85 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p---~n~P~~~~~~~~~~al-aGN~v--v~k~~~~~~~~~~~~~~~l~~ag~ 85 (120)
.++...-.+..|+.-++++.| .-||...+|. +.||- ||..= +.-|....-...-.+.-..+.+|.
T Consensus 95 ~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~-aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv 165 (412)
T PF00815_consen 95 EPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMT-AIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGV 165 (412)
T ss_dssp ETTEEEEEEEEE-SEEEEE---SSS--THHHHHH-HHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-
T ss_pred cCCcEEEEEEEEhhheEEEccCCCCCccHHHHHc-ccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCC
Confidence 456677788889999999999 4566555555 55555 75544 444443322233344445556665
No 187
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=26.58 E-value=1.4e+02 Score=19.24 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=24.1
Q ss_pred HHHHHH-hCCCCCcEEEE--eCCChHHHHHHHhCCCcceEEEecC
Q psy1844 77 YKIMIE-AGVPPGVVNFV--PADGPVFGDTITASPYLAGINFTGS 118 (120)
Q Consensus 77 ~~~l~~-ag~p~g~~~~i--~~~~~~~~~~l~~~~~i~~v~ftGs 118 (120)
++.|++ .|++-..+ -+ .+...+..+.+ .+.+++.|.+|-+
T Consensus 37 a~~L~~~~Gi~v~~v-k~~~~~g~~~i~~~i-~~g~i~~VInt~~ 79 (115)
T cd01422 37 GLLIQEATGLTVNRM-KSGPLGGDQQIGALI-AEGEIDAVIFFRD 79 (115)
T ss_pred HHHHHHhhCCcEEEE-ecCCCCchhHHHHHH-HcCceeEEEEcCC
Confidence 344556 67776666 34 33233344444 5668999999854
No 188
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=26.35 E-value=2e+02 Score=23.09 Aligned_cols=44 Identities=9% Similarity=-0.127 Sum_probs=30.1
Q ss_pred CCCcceEEEeccCeEEEEEcCC---ChhhhhHHhhhccccCCCeEEe
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPF---NFTAIGGNLAYTPALMGSSVLW 63 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~---n~P~~~~~~~~~~alaGN~vv~ 63 (120)
.++...-.+..|+.-++++.|. -||...+|..+.+-+||..=|+
T Consensus 77 ~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv 123 (393)
T TIGR00069 77 EPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIV 123 (393)
T ss_pred CCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEE
Confidence 4566677888899999999997 4666555555544458655443
No 189
>PRK14497 putative molybdopterin biosynthesis protein MoeA/unknown domain fusion protein; Provisional
Probab=26.23 E-value=1.2e+02 Score=25.46 Aligned_cols=47 Identities=13% Similarity=0.140 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhC-CCcceEEEecCC
Q psy1844 73 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS-PYLAGINFTGSV 119 (120)
Q Consensus 73 ~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~-~~i~~v~ftGs~ 119 (120)
...+...+++.|+......++..+.++..+.|.+. .+.|.|..||++
T Consensus 208 s~~L~a~l~~~G~~v~~~~iv~Dd~e~i~~~l~~al~~~DlVIttGGt 255 (546)
T PRK14497 208 LHYLYSKLKSEGYKIVGLSLLSDDKESIKNEIKRAISVADVLILTGGT 255 (546)
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHhhhcCCEEEEcCCc
Confidence 34677779999987666666654433333443221 358999999975
No 190
>PLN02476 O-methyltransferase
Probab=25.80 E-value=2.8e+02 Score=21.02 Aligned_cols=51 Identities=12% Similarity=-0.104 Sum_probs=36.8
Q ss_pred CCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh---CCCcceEEEecC
Q psy1844 67 DTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA---SPYLAGINFTGS 118 (120)
Q Consensus 67 ~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~---~~~i~~v~ftGs 118 (120)
+..+.......+.++++|+. +-++++.|+..+..+.+.. ...+|.|++.+.
T Consensus 150 E~d~e~~~~Ar~n~~~aGl~-~~I~li~GdA~e~L~~l~~~~~~~~FD~VFIDa~ 203 (278)
T PLN02476 150 ERDSNSLEVAKRYYELAGVS-HKVNVKHGLAAESLKSMIQNGEGSSYDFAFVDAD 203 (278)
T ss_pred ECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHHHHHhcccCCCCCEEEECCC
Confidence 55566677788889999997 5689999876555555542 246999988664
No 191
>TIGR03628 arch_S11P archaeal ribosomal protein S11P. This model describes exclusively the archaeal ribosomal protein S11P. It excludes homologous ribosomal proteins S14 from eukaryotes and S11 from bacteria.
Probab=25.22 E-value=2.1e+02 Score=18.82 Aligned_cols=84 Identities=18% Similarity=0.041 Sum_probs=48.7
Q ss_pred CeEEEEEcCCChhhhhHHhhhc-c--cc-CCCeEEeecC-CCcHHHHH----HHHHHHHHhCCCCCcEEEE---------
Q psy1844 32 DGFVAAVSPFNFTAIGGNLAYT-P--AL-MGSSVLWKPS-DTALLSNY----TIYKIMIEAGVPPGVVNFV--------- 93 (120)
Q Consensus 32 ~Gvv~~i~p~n~P~~~~~~~~~-~--al-aGN~vv~k~~-~~~~~~~~----~~~~~l~~ag~p~g~~~~i--------- 93 (120)
.|++-+.+++|..+..+...-. - +. .|-.+..|.+ ..+|..++ .+.+.+.+.|+..=.+.+-
T Consensus 2 ~gi~hI~as~NNTiitvTD~~G~~~~~~~S~G~~g~kg~kk~TpyAAq~aa~~~~~~~~~~Gi~~v~v~ikG~gg~~~~~ 81 (114)
T TIGR03628 2 WGIAHIYSSFNNTIITITDITGAETIARSSGGMVVKADRDESSPYAAMQAAGRAAEKAKERGITGLHIKVRAPGGNGQKS 81 (114)
T ss_pred cEEEEEEccCCCeEEEEEcCCCCEEEEEecCcceEeCCCccCCHHHHHHHHHHHHHHHHHcCCcEEEEEEEecCCCCCCC
Confidence 5899999999999887766544 1 22 2666666666 44555554 4555555667765544442
Q ss_pred eCCChHHHHHHHhCCCcceEEE
Q psy1844 94 PADGPVFGDTITASPYLAGINF 115 (120)
Q Consensus 94 ~~~~~~~~~~l~~~~~i~~v~f 115 (120)
+|++++..-.-+....+.....
T Consensus 82 ~G~Gr~~air~l~~~glkI~~I 103 (114)
T TIGR03628 82 PGPGAQAAIRALARAGLRIGRI 103 (114)
T ss_pred CCCcHHHHHHHHHHCCCEEEEE
Confidence 2455554433333344554443
No 192
>TIGR00322 diphth2_R diphthamide biosynthesis protein 2-related domain. Because archaeal species are known to have the diphthamide modification to the conserved His of archaeal and eukaryotic EF-2, it may be that the lone homolog of YKL191W in M. jannaschii, A. fulgidus, and M. thermoautotrophicum is orthologous. However, each of these is considerably shorter than YKL191W and seems more closely related to the uncharacterized protein YIL103W than to YKL191W.
Probab=24.97 E-value=2.3e+02 Score=22.01 Aligned_cols=53 Identities=13% Similarity=-0.009 Sum_probs=36.3
Q ss_pred ecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844 64 KPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120 (120)
Q Consensus 64 k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~ 120 (120)
|.....+.....+.++++++|...=++.+ + +-.-+.|..-+++|..+.+|.++
T Consensus 242 l~~q~~~~~~~~l~~ll~~~gkk~y~i~~--~--~in~~kL~nf~eiD~fV~~aCPr 294 (332)
T TIGR00322 242 KGGQGRLRLAKNLKKNLEEAGKTVLIILL--S--NVSPAKLLMFDQIDVFVQVACPR 294 (332)
T ss_pred CccCCCHHHHHHHHHHHHHcCCcEEEEEe--C--CCCHHHHhCCCCcCEEEEecCCC
Confidence 34556677888888889988875544332 2 22336777777899999888764
No 193
>TIGR03427 ABC_peri_uca ABC transporter periplasmic binding protein, urea carboxylase region. Members of this family are ABC transporter periplasmic binding proteins associated with the urea carboxylase/allophanate hydrolase pathway, an alternative to urease for urea degradation. The protein is restricted to bacteria with the pathway, with its gene close to the urea carboxylase and allophanate hydrolase genes. The substrate for this transporter therefore is likely to be urea or a compound from which urea is easily derived.
Probab=24.91 E-value=2.2e+02 Score=21.88 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEE
Q psy1844 71 LSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINF 115 (120)
Q Consensus 71 ~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~f 115 (120)
.....+.+.|+++|+.++-+++++-+..+...+|. ..+||+.+.
T Consensus 116 ~~~~ll~~aL~~aGL~~~DV~~v~~~~~d~~aAl~-~G~VDAa~~ 159 (328)
T TIGR03427 116 VSHYLLARALESVGLSEKDVKVVNTSDADIVAAFI-TKDVTAVVT 159 (328)
T ss_pred hHHHHHHHHHHHcCCCHHHeEEEeCChHHHHHHHh-cCCCcEEEE
Confidence 34456889999999999999999886555555554 567998764
No 194
>PRK14540 nucleoside diphosphate kinase; Provisional
Probab=24.85 E-value=1.1e+02 Score=20.45 Aligned_cols=44 Identities=11% Similarity=0.008 Sum_probs=26.0
Q ss_pred EEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHH
Q psy1844 61 VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTI 104 (120)
Q Consensus 61 vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l 104 (120)
+++||+-........+.+.+++.||-=.-...+.-+..++.+.+
T Consensus 7 ~lIKPda~~~~~~g~Il~~i~~~Gf~I~~~k~~~lt~~~a~~~Y 50 (134)
T PRK14540 7 VALKPDAVERKLIGKIIQRFENKGFEIVEMKMLKLTREMAEEYY 50 (134)
T ss_pred EEECcchhhcCchHHHHHHHHHcCCEEEEeeeecCCHHHHHHHH
Confidence 56787765433334566677777887776766665433333333
No 195
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=24.41 E-value=1.2e+02 Score=18.30 Aligned_cols=40 Identities=18% Similarity=0.004 Sum_probs=23.2
Q ss_pred HHHHHHhCCCCC-cEEEEeCCChHHHHHHHhCCCcceEEEec
Q psy1844 77 YKIMIEAGVPPG-VVNFVPADGPVFGDTITASPYLAGINFTG 117 (120)
Q Consensus 77 ~~~l~~ag~p~g-~~~~i~~~~~~~~~~l~~~~~i~~v~ftG 117 (120)
++.|++.|++-. .+.-+.+. ......++.+.++|.|..+-
T Consensus 23 a~~L~~~Gi~~~~~~~ki~~~-~~~i~~~i~~g~id~VIn~~ 63 (90)
T smart00851 23 AKFLREAGLPVKTLHPKVHGG-ILAILDLIKNGEIDLVINTL 63 (90)
T ss_pred HHHHHHCCCcceeccCCCCCC-CHHHHHHhcCCCeEEEEECC
Confidence 455667887753 34434332 22234455667899998864
No 196
>PTZ00093 nucleoside diphosphate kinase, cytosolic; Provisional
Probab=23.71 E-value=1.1e+02 Score=20.81 Aligned_cols=38 Identities=13% Similarity=0.061 Sum_probs=24.4
Q ss_pred EEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCCh
Q psy1844 61 VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGP 98 (120)
Q Consensus 61 vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~ 98 (120)
+++||+-........+.+.+++.||--.....+.-+..
T Consensus 7 ~lIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~~ 44 (149)
T PTZ00093 7 IMVKPDGVQRGLVGEIIKRFEKKGYKLVALKMLQPTPE 44 (149)
T ss_pred EEECcchhhcCchHHHHHHHHHCCCEEEEeEeecCCHH
Confidence 56787754333345677777788887777776665433
No 197
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=23.53 E-value=4.7e+02 Score=22.38 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=46.0
Q ss_pred cccCCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEE
Q psy1844 54 PALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 114 (120)
Q Consensus 54 ~alaGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ 114 (120)
.+.-|...++|+.+..+.....+.+++++.|+...-+.+.+-...+ ..+..+.-.|.|.
T Consensus 455 ~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~--~h~a~~~iADlvL 513 (620)
T COG3914 455 SAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNE--DHRARYGIADLVL 513 (620)
T ss_pred HhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCH--HHHHhhchhheee
Confidence 3334888889999999999999999999999999999998875443 5555555555554
No 198
>KOG0911|consensus
Probab=23.43 E-value=1.1e+02 Score=22.63 Aligned_cols=53 Identities=8% Similarity=0.071 Sum_probs=38.8
Q ss_pred eecCCCcHHHHH--HHHHHHHHhCCCCCcEEEEeCCC-hHHHHHHHhCCCcceEEE
Q psy1844 63 WKPSDTALLSNY--TIYKIMIEAGVPPGVVNFVPADG-PVFGDTITASPYLAGINF 115 (120)
Q Consensus 63 ~k~~~~~~~~~~--~~~~~l~~ag~p~g~~~~i~~~~-~~~~~~l~~~~~i~~v~f 115 (120)
+|+++..|.+.. .+..+|++.|.+-+.++++.... ++....+.++|-+--++.
T Consensus 145 mKG~p~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSdWPTfPQlyI 200 (227)
T KOG0911|consen 145 MKGTPEEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSDWPTFPQLYV 200 (227)
T ss_pred ecCCCCcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcCCCCccceeE
Confidence 789999998865 69999999999999999987521 112345666666666554
No 199
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=23.03 E-value=3.1e+02 Score=20.14 Aligned_cols=76 Identities=7% Similarity=-0.015 Sum_probs=51.6
Q ss_pred ChhhhhHHhhhcccc-C-CCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcE---EE-----Ee-CCChHHHHHHH--hCC
Q psy1844 42 NFTAIGGNLAYTPAL-M-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV---NF-----VP-ADGPVFGDTIT--ASP 108 (120)
Q Consensus 42 n~P~~~~~~~~~~al-a-GN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~---~~-----i~-~~~~~~~~~l~--~~~ 108 (120)
.-|..++...+..|| + |-.=|.--+|-.+..+..+.+.+++.|+.=-.+ ++ +. -+.+...+.+. .++
T Consensus 101 g~p~tt~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~ 180 (239)
T TIGR02990 101 GTPVVTPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDP 180 (239)
T ss_pred CCCeeCHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCC
Confidence 457777888888888 6 888888889999999999999999987642111 11 11 11222222222 378
Q ss_pred CcceEEEec
Q psy1844 109 YLAGINFTG 117 (120)
Q Consensus 109 ~i~~v~ftG 117 (120)
+.|+|+..+
T Consensus 181 ~aDAifisC 189 (239)
T TIGR02990 181 DADALFLSC 189 (239)
T ss_pred CCCEEEEeC
Confidence 899998764
No 200
>PF15643 Tox-PL-2: Papain fold toxin 2
Probab=22.70 E-value=1.7e+02 Score=18.86 Aligned_cols=30 Identities=10% Similarity=0.249 Sum_probs=26.7
Q ss_pred CCCcHHHHHHHHHHHHHhCCCCCcEEEEeC
Q psy1844 66 SDTALLSNYTIYKIMIEAGVPPGVVNFVPA 95 (120)
Q Consensus 66 ~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~ 95 (120)
--++-.+|.++.+-|.++|+|-.++++-++
T Consensus 18 ~~qC~~cA~Al~~~L~~~gI~Gk~i~l~T~ 47 (100)
T PF15643_consen 18 IFQCVECASALKQFLKQAGIPGKIIRLYTG 47 (100)
T ss_pred ceehHHHHHHHHHHHHHCCCCceEEEEEec
Confidence 346788999999999999999999999886
No 201
>smart00562 NDK These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.
Probab=22.68 E-value=1.1e+02 Score=20.03 Aligned_cols=36 Identities=11% Similarity=0.011 Sum_probs=22.4
Q ss_pred EEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCC
Q psy1844 61 VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96 (120)
Q Consensus 61 vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~ 96 (120)
+++||+-..-.....+.+.+.+.||---..+.+.-+
T Consensus 5 ~iIKPda~~~~~~g~Il~~i~~~gf~I~~~k~~~lt 40 (135)
T smart00562 5 AIIKPDAVQRGLIGEIISRFERKGFKIVAMKMLQLT 40 (135)
T ss_pred EEECchhhhcccHHHHHHHHHHCCCEEEEEeeecCC
Confidence 567876544333345666677777777666666553
No 202
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine
Probab=22.49 E-value=2.2e+02 Score=19.43 Aligned_cols=44 Identities=14% Similarity=0.115 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844 73 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119 (120)
Q Consensus 73 ~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~ 119 (120)
...+.+.++++|...--+.++.....+. ......+|+++++||.
T Consensus 13 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~---~~~~~~~dgvil~Gg~ 56 (188)
T cd01741 13 PGLFEDLLREAGAETIEIDVVDVYAGEL---LPDLDDYDGLVILGGP 56 (188)
T ss_pred cchHHHHHHhcCCCCceEEEEecCCCCC---CCCcccCCEEEECCCC
Confidence 5667888888874222223333221111 2234579999999985
No 203
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=21.77 E-value=1.8e+02 Score=19.60 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=23.0
Q ss_pred HHHHHHh-CCCCCcEEEEeCC--ChHHHHHHHhCCCcceEEEec
Q psy1844 77 YKIMIEA-GVPPGVVNFVPAD--GPVFGDTITASPYLAGINFTG 117 (120)
Q Consensus 77 ~~~l~~a-g~p~g~~~~i~~~--~~~~~~~l~~~~~i~~v~ftG 117 (120)
++.|++. |++-..+ +.++ ++.....++.+.+|+.|.+|-
T Consensus 42 a~~L~~~~Gi~v~~v--i~~~~gg~~~i~~~I~~g~i~lVInt~ 83 (142)
T PRK05234 42 GGLIQEATGLDVTRL--LSGPLGGDQQIGALIAEGKIDMLIFFR 83 (142)
T ss_pred HHHHHhccCCeeEEE--EcCCCCCchhHHHHHHcCceeEEEEec
Confidence 3445666 8875544 4431 223334445577899999975
No 204
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=21.69 E-value=3.1e+02 Score=22.05 Aligned_cols=47 Identities=13% Similarity=-0.017 Sum_probs=30.9
Q ss_pred CCCcceEEEeccCeEEEEEcCC---ChhhhhHHhhhccccCCCeEE--eecC
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPF---NFTAIGGNLAYTPALMGSSVL--WKPS 66 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~---n~P~~~~~~~~~~alaGN~vv--~k~~ 66 (120)
.++...-.+..|+--++++.|- -||...+|..+.+-+||..=| +-|.
T Consensus 81 ~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 81 EPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred CCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 3566777888889999999995 366655555544445865544 4444
No 205
>PRK03673 hypothetical protein; Provisional
Probab=21.69 E-value=1.9e+02 Score=23.12 Aligned_cols=49 Identities=12% Similarity=0.091 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHH-hCCCcceEEEecCC
Q psy1844 71 LSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTIT-ASPYLAGINFTGSV 119 (120)
Q Consensus 71 ~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~-~~~~i~~v~ftGs~ 119 (120)
-.+.++++.+.+.|+.-....++..+.++..+.+. ...+.|.|..||+.
T Consensus 21 tN~~~la~~L~~~G~~v~~~~~v~D~~~~i~~~l~~a~~~~DlVI~tGGl 70 (396)
T PRK03673 21 TNAAWLADFFFHQGLPLSRRNTVGDNLDALVAILRERSQHADVLIVNGGL 70 (396)
T ss_pred hHHHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHHhccCCEEEEcCCC
Confidence 34557888899999886555555544333444443 23357999999974
No 206
>PRK14545 nucleoside diphosphate kinase; Provisional
Probab=21.43 E-value=1.2e+02 Score=20.32 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=22.7
Q ss_pred eEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCC
Q psy1844 60 SVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96 (120)
Q Consensus 60 ~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~ 96 (120)
-+++||+-........+.+.+++.||-=...+.+.-+
T Consensus 7 l~iIKPdav~~~~~g~Il~~i~~~Gf~I~~~k~~~lt 43 (139)
T PRK14545 7 FTMIKPDAVENGHIGGILDMITAAGFRIVAMKLTQLT 43 (139)
T ss_pred EEEECchhhhcCcHHHHHHHHHHCCCEEEEeeeecCC
Confidence 3567877544334455666777777766666665553
No 207
>PLN02926 histidinol dehydrogenase
Probab=21.28 E-value=2.7e+02 Score=22.71 Aligned_cols=47 Identities=21% Similarity=0.156 Sum_probs=31.0
Q ss_pred CCCcceEEEeccCeEEEEEcCC---ChhhhhHHhhhccccCCCe--EEeecC
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPF---NFTAIGGNLAYTPALMGSS--VLWKPS 66 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~---n~P~~~~~~~~~~alaGN~--vv~k~~ 66 (120)
.++...-.+..|+.-++++.|. -||...+|..+.+-+||.. +++-|.
T Consensus 109 ~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (431)
T PLN02926 109 MPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPP 160 (431)
T ss_pred CCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECC
Confidence 3556667888899999999997 4666555554444457654 444454
No 208
>smart00540 LEM in nuclear membrane-associated proteins. LEM, domain in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin.
Probab=21.26 E-value=84 Score=17.05 Aligned_cols=22 Identities=27% Similarity=0.516 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEE
Q psy1844 70 LLSNYTIYKIMIEAGVPPGVVN 91 (120)
Q Consensus 70 ~~~~~~~~~~l~~ag~p~g~~~ 91 (120)
.++...+.+.|.+.|+|+|=+.
T Consensus 5 ~LSd~eL~~~L~~~G~~~gPIt 26 (44)
T smart00540 5 RLSDAELRAELKQYGLPPGPIT 26 (44)
T ss_pred HcCHHHHHHHHHHcCCCCCCcC
Confidence 4566788889999999999553
No 209
>smart00115 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues. Cysteine aspartases that mediate programmed cell death (apoptosis). Caspases are synthesised as zymogens and activated by proteolysis of the peptide backbone adjacent to an aspartate. The resulting two subunits associate to form an (alpha)2(beta)2-tetramer which is the active enzyme. Activation of caspases can be mediated by other caspase homologues.
Probab=21.22 E-value=3.3e+02 Score=19.77 Aligned_cols=44 Identities=11% Similarity=0.135 Sum_probs=29.9
Q ss_pred eccCeEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCc
Q psy1844 29 RGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89 (120)
Q Consensus 29 ~~p~Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~ 89 (120)
+.|.|++++|.-.+|.- +++-+.+..=+..+.++|++.||.-.+
T Consensus 5 ~~p~g~alII~n~~f~~-----------------~~~r~g~~~D~~~l~~~f~~lgF~V~~ 48 (241)
T smart00115 5 SKPRGLALIINNENFHS-----------------LPRRNGTDVDAENLTELFQSLGYEVHV 48 (241)
T ss_pred CCCCcEEEEEECccCCC-----------------CcCCCCcHHHHHHHHHHHHHCCCEEEE
Confidence 56789999998877752 123334455677788888888884433
No 210
>cd00595 NDPk Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of nucleoside triphosphates (NTPs), are involved in numerous regulatory processes associated with proliferation, development, and differentiation. They are vital for DNA/RNA synthesis, cell division, macromolecular metabolism and growth. The enzymes generate NTPs or their deoxy derivatives by terminal (gamma) phosphotransfer from an NTP such as ATP or GTP to any nucleoside diphosphate (NDP) or its deoxy derivative. The sequence of NDPk has been highly conserved through evolution. There is a single histidine residue conserved in all known NDK isozymes, which is involved in the catalytic mechanism. The first confirmed metastasis suppressor gene was the NDP kinase protein encoded by the nm23 gene. Unicellular organisms generally possess only one gene encoding NDP kinase, while most multicellular organisms possess not only an ortholog that provides most of the NDP kinase enzymatic a
Probab=21.20 E-value=1.1e+02 Score=20.20 Aligned_cols=37 Identities=19% Similarity=0.014 Sum_probs=23.8
Q ss_pred EEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCC
Q psy1844 61 VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADG 97 (120)
Q Consensus 61 vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~ 97 (120)
+++||+-..-.....+.+.+++.||--...+.+.-+.
T Consensus 5 ~iIKPd~~~~~~~g~Il~~i~~~Gf~I~~~k~~~lt~ 41 (133)
T cd00595 5 ALIKPDAVAEGLLGEIIMRIEDAGFEIVAMKELHLTE 41 (133)
T ss_pred EEECchHHhcCcHHHHHHHHHHcCCEEEEeeeecCCH
Confidence 5678765433244567777778888777776666543
No 211
>PF14265 DUF4355: Domain of unknown function (DUF4355)
Probab=21.02 E-value=39 Score=21.98 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=20.6
Q ss_pred HHHHHHHHhCCCCCcEEEEeCCChHHH
Q psy1844 75 TIYKIMIEAGVPPGVVNFVPADGPVFG 101 (120)
Q Consensus 75 ~~~~~l~~ag~p~g~~~~i~~~~~~~~ 101 (120)
...+++.+.|+|..++..|.|++.+..
T Consensus 73 ~~~~~l~e~GLp~~l~~~l~g~d~e~~ 99 (125)
T PF14265_consen 73 EAKKVLAEKGLPAELADFLVGDDEEET 99 (125)
T ss_pred HHHHHHHHcCCCHHHHHHHhCCCHHHH
Confidence 466778888999999888888655543
No 212
>PF09084 NMT1: NMT1/THI5 like; InterPro: IPR015168 This entry is found in the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine [, , ]. They are regulated by thiamine []. ; PDB: 2X26_A 3E4R_A 3KSJ_A 3KSX_A 3UIF_A 4DDD_A 1US4_A 1US5_A 3IX1_B 2X7P_A ....
Probab=20.99 E-value=2.6e+02 Score=19.11 Aligned_cols=55 Identities=16% Similarity=0.250 Sum_probs=37.9
Q ss_pred cCCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEE
Q psy1844 56 LMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 114 (120)
Q Consensus 56 laGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ 114 (120)
|.|-.+-+-. .......+.+++++.|++..-++.+..+..+....|.+ .++|.+.
T Consensus 91 LkGK~i~v~~---~s~~~~~~~~~l~~~g~~~~~v~~v~~~~~~~~~al~~-g~vDa~~ 145 (216)
T PF09084_consen 91 LKGKKIGVSR---GSSSEYFLRALLKKNGIDPDDVKIVNLGPPELAQALLS-GQVDAAI 145 (216)
T ss_dssp GTTSEEEEST---TSHHHHHHHHHHHHTTT-GGGSEEEES-HHHHHHHHHT-TSSSEEE
T ss_pred hCCCEEEEec---CcchhHHHHHHHHHhccccccceeeeeehhhhhhhhhc-CCCCEEE
Confidence 4577766554 23355677889999999999999988865555566664 5689877
No 213
>COG4996 Predicted phosphatase [General function prediction only]
Probab=20.82 E-value=2.6e+02 Score=19.31 Aligned_cols=37 Identities=19% Similarity=0.367 Sum_probs=23.7
Q ss_pred eEEEEEcCCChhhhhHHhhhcccc---C-CCeEEeecCCCcHH
Q psy1844 33 GFVAAVSPFNFTAIGGNLAYTPAL---M-GSSVLWKPSDTALL 71 (120)
Q Consensus 33 Gvv~~i~p~n~P~~~~~~~~~~al---a-GN~vv~k~~~~~~~ 71 (120)
|-++-..+||+|.-- ..+..|| . =.-.|.+|+|.--+
T Consensus 57 G~i~~~~sWN~~~kA--~~aLral~~~~yFhy~ViePhP~K~~ 97 (164)
T COG4996 57 GYILGLASWNFEDKA--IKALRALDLLQYFHYIVIEPHPYKFL 97 (164)
T ss_pred CcEEEEeecCchHHH--HHHHHHhchhhhEEEEEecCCChhHH
Confidence 778888999999531 1222222 2 56788999875543
No 214
>cd04416 NDPk_TX NDP kinase domain of thioredoxin domain-containing proteins (TXNDC3 and TXNDC6): Txl-2 (TXNDC6) and Sptrx-2 (TXNDC3) are fusion proteins of Group II N-terminal thioredoxin domains followed by one or three NDP kinase domains, respectively. Sptrx-2, which has a tissue specific distribution in human testis, has been considered as a member of the nm23 family (nm23-H8) and exhibits a high homology with sea urchin IC1 (intermediate chain-1) protein, a component of the sperm axonemal outer dynein arm complex. Txl-2 is mainly represented in close association with microtubules within tissues with cilia and flagella such as seminiferous epithelium (spermatids) and lung airway epithelium, suggesting possible role in control of microtubule stability and maintenance.
Probab=20.81 E-value=1.4e+02 Score=19.67 Aligned_cols=35 Identities=23% Similarity=0.133 Sum_probs=22.3
Q ss_pred EEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCC
Q psy1844 61 VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96 (120)
Q Consensus 61 vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~ 96 (120)
+++||+-..- ....+.+.+.+.||--.....+.-+
T Consensus 5 ~iIKPdav~~-~~g~Il~~i~~~Gf~I~~~k~~~lt 39 (132)
T cd04416 5 ALIKPDAVAE-KKDEILEKIKEAGFEILAQKEMVLT 39 (132)
T ss_pred EEEChHHHHH-HHHHHHHHHHHCCCEEEEeeeecCC
Confidence 5678775433 4456677777778766666665554
No 215
>PF06871 TraH_2: TraH_2; InterPro: IPR010680 This family consists of several TraH proteins, which seem to be specific to Agrobacterium and Rhizobium species. This protein is thought to be involved in conjugal transfer but its function is unknown. This family does not appear to be related to IPR010927 from INTERPRO.
Probab=20.51 E-value=1.3e+02 Score=21.78 Aligned_cols=22 Identities=9% Similarity=0.200 Sum_probs=18.4
Q ss_pred CCCeEEeecCCCcHHHHHHHHH
Q psy1844 57 MGSSVLWKPSDTALLSNYTIYK 78 (120)
Q Consensus 57 aGN~vv~k~~~~~~~~~~~~~~ 78 (120)
+||.+|+.|-+.+|--++.+.+
T Consensus 39 sG~R~vLVPkp~tpdeAm~liR 60 (206)
T PF06871_consen 39 SGGRLVLVPKPKTPDEAMALIR 60 (206)
T ss_pred ECCEEEEecCCCCHHHHHHHHH
Confidence 6999999999999977776554
No 216
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=20.38 E-value=2.3e+02 Score=17.51 Aligned_cols=57 Identities=19% Similarity=0.264 Sum_probs=33.9
Q ss_pred cCCCeEEee--cC---CCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHH---hCCCcceEEE
Q psy1844 56 LMGSSVLWK--PS---DTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTIT---ASPYLAGINF 115 (120)
Q Consensus 56 laGN~vv~k--~~---~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~---~~~~i~~v~f 115 (120)
+..|.||+- .. +.+|.+. .+.++|.+.|++-..+.+... .+..+.|. ..+-+-.|++
T Consensus 9 i~~~~Vvvf~kg~~~~~~Cp~C~-~ak~lL~~~~i~~~~~di~~~--~~~~~~l~~~tg~~tvP~vfi 73 (97)
T TIGR00365 9 IKENPVVLYMKGTPQFPQCGFSA-RAVQILKACGVPFAYVNVLED--PEIRQGIKEYSNWPTIPQLYV 73 (97)
T ss_pred hccCCEEEEEccCCCCCCCchHH-HHHHHHHHcCCCEEEEECCCC--HHHHHHHHHHhCCCCCCEEEE
Confidence 356666655 32 5566665 578888999999887776432 34444443 3334444543
No 217
>COG1556 Uncharacterized conserved protein [Function unknown]
Probab=20.35 E-value=3.5e+02 Score=19.92 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=31.1
Q ss_pred CCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChH
Q psy1844 58 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPV 99 (120)
Q Consensus 58 GN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~ 99 (120)
=+-+|+|-|...|...+.+..+-++..-.++.++++.|+++.
T Consensus 152 ~~I~vl~ks~ivp~~~~~~~~l~~~~~~gPs~i~~IsGPS~T 193 (218)
T COG1556 152 HHIAVLKKSTIVPRLSQAAEALRQKAKNGPSNINFISGPSRT 193 (218)
T ss_pred eEEEEEecccccccHHHHHHHHHHHhccCCcceEEeecCCcc
Confidence 466778878888888877777766664448889999997653
No 218
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=20.34 E-value=2.6e+02 Score=22.72 Aligned_cols=45 Identities=11% Similarity=-0.110 Sum_probs=29.4
Q ss_pred CCCcceEEEeccCeEEEEEcCC---ChhhhhHHhhhccccCCCeEEee
Q psy1844 20 KSTLNSLRYRGLDGFVAAVSPF---NFTAIGGNLAYTPALMGSSVLWK 64 (120)
Q Consensus 20 ~~~~~~~~~~~p~Gvv~~i~p~---n~P~~~~~~~~~~alaGN~vv~k 64 (120)
.++...-.+..|+.-++++.|- -||...+|..+.+-+||..=|+-
T Consensus 104 ~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~ 151 (426)
T PRK12447 104 LPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIA 151 (426)
T ss_pred CCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEE
Confidence 3555667788899999999995 46665555544444586654443
No 219
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.33 E-value=1.3e+02 Score=24.83 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=23.2
Q ss_pred cCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHH
Q psy1844 39 SPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSN 73 (120)
Q Consensus 39 ~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~ 73 (120)
..-|||+... .+...+ +|-+||+.++++...+-
T Consensus 239 ~AHNfplssP--G~LGv~~agG~VVla~~psp~~~F 272 (542)
T COG1021 239 AAHNFPLSSP--GALGVFLAGGTVVLAPDPSPELCF 272 (542)
T ss_pred cccCCCCCCc--chhheeeeccEEEECCCCCHHHHH
Confidence 4579998753 345556 89999999888764443
No 220
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=20.13 E-value=4.9e+02 Score=21.24 Aligned_cols=46 Identities=9% Similarity=-0.114 Sum_probs=33.8
Q ss_pred CCCCcceEEEeccCeEEEEEcC---CChhhhhHHhhhccccCCCeEEee
Q psy1844 19 PKSTLNSLRYRGLDGFVAAVSP---FNFTAIGGNLAYTPALMGSSVLWK 64 (120)
Q Consensus 19 ~~~~~~~~~~~~p~Gvv~~i~p---~n~P~~~~~~~~~~alaGN~vv~k 64 (120)
..++...-.+..|+--|+++.| .-||...+|..+.+-+||+.=|+-
T Consensus 104 ~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~ 152 (425)
T COG0141 104 TEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVV 152 (425)
T ss_pred ccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEE
Confidence 4567777888889999999999 678877766666555687654433
Done!