BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1859
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WVA3|BUB3_MOUSE Mitotic checkpoint protein BUB3 OS=Mus musculus GN=Bub3 PE=2 SV=2
Length = 326
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 108/130 (83%), Gaps = 1/130 (0%)
Query: 1 MGYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRI 60
MGY+ QRRESSLK+QTRCI+ FPNKQGYVLSSIEGR AVEYLD PE+QK KYAFKCHR+
Sbjct: 167 MGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRL 226
Query: 61 KEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ 119
KE+ IE+IYPVNAISFH +NTFATGGSDG+VNIWD FNKKRLCQFHRY T I SL F
Sbjct: 227 KENNIEQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSN 286
Query: 120 EYNTFATGGS 129
+ T A S
Sbjct: 287 DGTTLAIASS 296
>sp|Q1JQB2|BUB3_BOVIN Mitotic checkpoint protein BUB3 OS=Bos taurus GN=BUB3 PE=2 SV=1
Length = 326
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 108/130 (83%), Gaps = 1/130 (0%)
Query: 1 MGYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRI 60
MGY+ QRRESSLK+QTRCI+ FPNKQGYVLSSIEGR AVEYLD PE+QK KYAFKCHR+
Sbjct: 167 MGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRL 226
Query: 61 KEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ 119
KE+ IE+IYPVNAISFH +NTFATGGSDG+VNIWD FNKKRLCQFHRY T I SL F
Sbjct: 227 KENNIEQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSN 286
Query: 120 EYNTFATGGS 129
+ T A S
Sbjct: 287 DGTTLAIASS 296
>sp|O43684|BUB3_HUMAN Mitotic checkpoint protein BUB3 OS=Homo sapiens GN=BUB3 PE=1 SV=1
Length = 328
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 108/130 (83%), Gaps = 1/130 (0%)
Query: 1 MGYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRI 60
MGY+ QRRESSLK+QTRCI+ FPNKQGYVLSSIEGR AVEYLD PE+QK KYAFKCHR+
Sbjct: 167 MGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRL 226
Query: 61 KEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ 119
KE+ IE+IYPVNAISFH +NTFATGGSDG+VNIWD FNKKRLCQFHRY T I SL F
Sbjct: 227 KENNIEQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSN 286
Query: 120 EYNTFATGGS 129
+ T A S
Sbjct: 287 DGTTLAIASS 296
>sp|Q9YGY3|BUB3_XENLA Mitotic checkpoint protein BUB3 OS=Xenopus laevis GN=bub3 PE=1 SV=1
Length = 330
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 108/130 (83%), Gaps = 1/130 (0%)
Query: 1 MGYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRI 60
MGY+ QRRESSLK+QTRCI+ FPNKQGYVLSSIEGR AVEYLD E+QK KYAFKCHR+
Sbjct: 173 MGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSLEVQKKKYAFKCHRL 232
Query: 61 KEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ 119
KE+ IE+IYPVNA+SFH +NTFATGGSDG+VNIWD FNKKRLCQFHRY T I SL F
Sbjct: 233 KENNIEQIYPVNAVSFHNLHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSN 292
Query: 120 EYNTFATGGS 129
+ +T A S
Sbjct: 293 DGSTLAIAAS 302
>sp|Q5RB58|BUB3_PONAB Mitotic checkpoint protein BUB3 OS=Pongo abelii GN=BUB3 PE=2 SV=1
Length = 328
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 107/130 (82%), Gaps = 1/130 (0%)
Query: 1 MGYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRI 60
MGY+ QRRESSLK+QTRCI+ F NKQGYVLSSIEGR AVEYLD PE+QK KYAFKCHR+
Sbjct: 167 MGYVQQRRESSLKYQTRCIRAFLNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRL 226
Query: 61 KEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ 119
KE+ IE+IYPVNAISFH +NTFATGGSDG+VNIWD FNKKRLCQFHRY T I SL F
Sbjct: 227 KENNIEQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSN 286
Query: 120 EYNTFATGGS 129
+ T A S
Sbjct: 287 DGTTLAIASS 296
>sp|Q54DM1|BUB3_DICDI Mitotic checkpoint protein bub3 OS=Dictyostelium discoideum GN=bub3
PE=3 SV=1
Length = 331
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
Query: 5 MQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDG 64
+Q+RESS+K+QTRCI+ F + +GY L+S+EGR A+EY D P +Q KYAFKCHR+ E G
Sbjct: 176 LQKRESSIKYQTRCIRTFTDGKGYALASVEGRIAMEYFDPSPAVQSKKYAFKCHRLTESG 235
Query: 65 IEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNT 123
++ +YPVN I+F+ Y TFATGG D V WDG N+KRL Y T I+S+ F+ + N
Sbjct: 236 VDVVYPVNCIAFNPHYGTFATGGCDKNVFFWDGANRKRLHALKTYPTSISSMSFNTDGNI 295
Query: 124 FATGGS 129
A S
Sbjct: 296 LAVASS 301
>sp|Q38942|RAE1L_ARATH Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670
PE=2 SV=2
Length = 349
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 7/121 (5%)
Query: 6 QRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGI 65
+R +S LK+QTRC+ FP++QG+++ SIEGR V +LD Q + FKCHR D
Sbjct: 190 KRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDD--SQQSKNFTFKCHRDGND-- 245
Query: 66 EKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGIT-SLFHQEYNTF 124
IY VN+++FH + TFAT GSDG N WD +K+RL R + I S F+ + + +
Sbjct: 246 --IYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIY 303
Query: 125 A 125
A
Sbjct: 304 A 304
>sp|O42860|BUB3_SCHPO Mitotic checkpoint protein bub3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bub3 PE=1 SV=1
Length = 320
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 65/111 (58%)
Query: 6 QRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGI 65
QRR SS K+ TR + C N +G+V SSIEGR +VEY++ E Q + FKCHR +
Sbjct: 171 QRRPSSFKYMTRSVCCNQNFEGFVSSSIEGRTSVEYINPSQEAQSKNFTFKCHRQIQKDY 230
Query: 66 EKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL 116
+ +YPVN + FH + T AT G DG V WD +KRL + I+S+
Sbjct: 231 DIVYPVNDLKFHPIHQTLATAGGDGVVAFWDIQVRKRLRVLNPSKINISSI 281
>sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GLE2 PE=1 SV=1
Length = 365
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
Query: 4 IMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMK-YAFKCHR--- 59
I + S LK+QTRC+ C+ GY + S+EGR ++ Y+D G MQK ++FKCHR
Sbjct: 199 IFKATTSPLKWQTRCVACYNEADGYAIGSVEGRCSIRYIDDG--MQKKSGFSFKCHRQTN 256
Query: 60 ----IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103
+G +YPVN+I+FH Y TF T G DG N WD + RL
Sbjct: 257 PNRAPGSNGQSLVYPVNSIAFHPLYGTFVTAGGDGTFNFWDKNQRHRL 304
>sp|P41838|RAE1_SCHPO Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rae1 PE=1 SV=1
Length = 352
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 4 IMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKED 63
I + S LKFQTR + CF GY + S+EGR A++ +D Q ++F+CHR +
Sbjct: 192 IFKLAMSPLKFQTRSLACFIKGDGYAIGSVEGRCAIQNIDEKNASQN--FSFRCHRNQAG 249
Query: 64 GIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGIT-SLFHQEYN 122
+Y VN+I+FH +Y TF+T GSDG + WD + +RL + I+ S F++ +
Sbjct: 250 NSADVYSVNSIAFHPQYGTFSTAGSDGTFSFWDKDSHQRLKSYPNVGGTISCSTFNRTGD 309
Query: 123 TFA 125
FA
Sbjct: 310 IFA 312
>sp|Q7ZWF0|RAE1L_DANRE mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=2
Length = 368
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 6 QRRESSLKFQTRCIKCFPNKQ----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-- 59
+R ES LK Q RC+ F +KQ G+ L SIEGR A+ Y++ P K + FKCHR
Sbjct: 205 RRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHYINP-PNPAKDNFTFKCHRSN 263
Query: 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LF 117
+ IY VNAISFH + T AT GSDG + WD + +L + D IT+ F
Sbjct: 264 GTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACCF 323
Query: 118 HQEYNTFATGGS 129
+ N FA S
Sbjct: 324 NHNGNIFAYASS 335
>sp|Q5E9A4|RAE1L_BOVIN mRNA export factor OS=Bos taurus GN=RAE1 PE=2 SV=1
Length = 368
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 6 QRRESSLKFQTRCIKCFPNKQ----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-- 59
+R ES LK Q RC+ F +KQ G+ L SIEGR A+ Y++ P K + FKCHR
Sbjct: 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP-PNPAKDNFTFKCHRSN 263
Query: 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LF 117
+ IY VN I+FH + T AT GSDG + WD + +L + D I++ F
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCF 323
Query: 118 HQEYNTFATGGS 129
+ N FA S
Sbjct: 324 NHNGNIFAYASS 335
>sp|Q5RF99|RAEL1_PONAB mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV=1
Length = 368
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 6 QRRESSLKFQTRCIKCFPNKQ----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-- 59
+R ES LK Q RC+ F +KQ G+ L SIEGR A+ Y++ P K + FKCHR
Sbjct: 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP-PNPAKDNFTFKCHRSN 263
Query: 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LF 117
+ IY VN I+FH + T AT GSDG + WD + +L + D I++ F
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCF 323
Query: 118 HQEYNTFATGGS 129
+ N FA S
Sbjct: 324 NHNGNIFAYASS 335
>sp|Q4R6D2|RAE1L_MACFA mRNA export factor OS=Macaca fascicularis GN=RAE1 PE=2 SV=1
Length = 368
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 6 QRRESSLKFQTRCIKCFPNKQ----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-- 59
+R ES LK Q RC+ F +KQ G+ L SIEGR A+ Y++ P K + FKCHR
Sbjct: 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP-PNPAKDNFTFKCHRSN 263
Query: 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LF 117
+ IY VN I+FH + T AT GSDG + WD + +L + D I++ F
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCF 323
Query: 118 HQEYNTFATGGS 129
+ N FA S
Sbjct: 324 NHNGNIFAYASS 335
>sp|P78406|RAE1L_HUMAN mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV=1
Length = 368
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 6 QRRESSLKFQTRCIKCFPNKQ----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-- 59
+R ES LK Q RC+ F +KQ G+ L SIEGR A+ Y++ P K + FKCHR
Sbjct: 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP-PNPAKDNFTFKCHRSN 263
Query: 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LF 117
+ IY VN I+FH + T AT GSDG + WD + +L + D I++ F
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCF 323
Query: 118 HQEYNTFATGGS 129
+ N FA S
Sbjct: 324 NHNGNIFAYASS 335
>sp|A5GFN6|RAEL1_PIG mRNA export factor OS=Sus scrofa GN=RAE1 PE=3 SV=1
Length = 368
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 6 QRRESSLKFQTRCIKCFPNKQ----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-- 59
+R ES LK Q RC+ F +KQ G+ L SIEGR A+ Y++ P K + FKCHR
Sbjct: 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP-PNPAKDNFTFKCHRSN 263
Query: 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LF 117
+ IY VN I+FH + T AT GSDG + WD + +L + D I++ F
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCF 323
Query: 118 HQEYNTFATGGS 129
+ N FA S
Sbjct: 324 NHNGNIFAYASS 335
>sp|Q8C570|RAE1L_MOUSE mRNA export factor OS=Mus musculus GN=Rae1 PE=1 SV=1
Length = 368
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 6 QRRESSLKFQTRCIKCFPNKQ----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-- 59
+R ES LK Q RC+ F +KQ G+ L SIEGR A+ Y++ P K + FKCHR
Sbjct: 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP-PNPAKDNFTFKCHRSN 263
Query: 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LF 117
+ IY VN I+FH + T AT GSDG + WD + +L + D I + F
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIAACCF 323
Query: 118 HQEYNTFATGGS 129
+ N FA S
Sbjct: 324 NHNGNIFAYASS 335
>sp|Q3SWS8|RAE1L_RAT mRNA export factor OS=Rattus norvegicus GN=Rae1 PE=2 SV=1
Length = 368
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 6 QRRESSLKFQTRCIKCFPNKQ----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-- 59
+R ES LK Q RC+ F +KQ G+ L SIEGR A+ Y++ P K + FKCHR
Sbjct: 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP-PNPAKDNFTFKCHRSN 263
Query: 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-F 117
+ IY VN I+FH + T AT GSDG + WD + +L + D + + F
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPVAACGF 323
Query: 118 HQEYNTFATGGS 129
+ N FA S
Sbjct: 324 NHNGNIFAYASS 335
>sp|Q93454|NPP17_CAEEL Nucleoporin-17 OS=Caenorhabditis elegans GN=npp-17 PE=1 SV=1
Length = 373
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 9 ESSLKFQTRCIKCFPNKQ-----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE- 62
ES LKFQ RCI F +K G+ L SIEGR AV+Y+D K + FKCHR E
Sbjct: 214 ESQLKFQIRCISIFKDKSNQNPAGFALGSIEGRVAVQYVDVA--NPKDNFTFKCHRSAEL 271
Query: 63 -DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103
+G ++IY VN I FH ++ T T GSDG ++WD + +L
Sbjct: 272 VNGFQEIYAVNDICFHPQHGTLVTIGSDGRYSMWDKDARTKL 313
>sp|Q5FVA9|RAE1L_XENTR mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1
Length = 368
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 6 QRRESSLKFQTRCIKCFPNKQ----GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-- 59
+R +S LK Q RC+ F +KQ G+ L SIEGR A+ Y++ P K + FKCHR
Sbjct: 205 RRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP-PNPAKDNFTFKCHRSN 263
Query: 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-F 117
+ IY VN I+FH + T AT GSDG + WD + +L + D I++ F
Sbjct: 264 GTNTTAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACSF 323
Query: 118 HQEYNTFATGGS 129
+ N FA S
Sbjct: 324 NHNGNIFAYSSS 335
>sp|P26449|BUB3_YEAST Cell cycle arrest protein BUB3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BUB3 PE=1 SV=1
Length = 341
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 8 RESSLKFQTRCIKCFPNKQ-GYVLSSIEGRAAVEYLDT-GPEMQKMK-YAFKCHRIKEDG 64
ES LK+Q R + P +Q GY SSI+GR AVE+ D G + K +AF+CHR+
Sbjct: 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD 247
Query: 65 IEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD 110
YPVN+I F + T GSDG ++ W+ +K++ F +++
Sbjct: 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN 293
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LFHQEYNTFATGGS 129
VN++ F+ + +T A+G SD V +W+ + K LC F + + + S +F+ + + A+G S
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSS 1262
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +WD + K L F + + S+ F+ D
Sbjct: 1263 DKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPD 1295
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LFHQEYNTFATGGS 129
VNA++F + T A+G D V +WD + K L + + + S +F+ + +T A+G S
Sbjct: 1161 VNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSS 1220
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +W+ + K LC F + + + S+ F+ D
Sbjct: 1221 DQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPD 1253
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VN++ F+ + + A+G SD V +WD + K L F + + S+ F+ + + A+G
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSG 1304
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +W+ + K L F + + ++S+ FS D
Sbjct: 1305 DQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPD 1337
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V ++F + FATG S G V W+ K L +++ + S+ F Q+ A+G
Sbjct: 867 VLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSD 926
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
D V +WD + + L F + + + S+ FS
Sbjct: 927 DQTVRLWDISSGQCLKTFKGHTSRVRSVVFS 957
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LFHQEYNTFATGGS 129
VN++ F Q+ A+G D V +WD + + L F + + + S +F A+G S
Sbjct: 909 VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSS 968
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +WD + + L F + + S+ F+ D
Sbjct: 969 DQTVRLWDISSGECLYIFQGHTGWVYSVAFNLD 1001
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V ++ F + A+GG D V +WD + L Y + + L F T A G S
Sbjct: 1077 VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS 1136
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +WD +KK L + + ++ FS D
Sbjct: 1137 DQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPD 1169
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VN+++F+ + + A+G D V +W+ + K L F + + ++S+ F + A+G
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSD 1346
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +W + + L F + + S+ FS D
Sbjct: 1347 DQTVRLWSISSGECLYTFLGHTNWVGSVIFSPD 1379
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LFHQEYNTFATGGS 129
V +++F+ + + ATG D V +WD + + F + + + S +F + A+G
Sbjct: 993 VYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSD 1052
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +WD + L + + + S+ FS D
Sbjct: 1053 DQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPD 1085
Score = 34.3 bits (77), Expect = 0.39, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LFHQEYNTFATGGS 129
V ++ F + A+G D V +WD + L + + + S +F + A+GG
Sbjct: 1035 VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGD 1094
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
D V +WD + L Y + + L FS
Sbjct: 1095 DQIVRLWDISSGNCLYTLQGYTSWVRFLVFS 1125
Score = 33.1 bits (74), Expect = 0.79, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V ++ F + A+G D V +W + K L ++ + S+ F + A+G
Sbjct: 1371 VGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSD 1430
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +W+ + + L H + + S+ FS D
Sbjct: 1431 DQTVRLWNISSGECLYTLHGHINSVRSVAFSSD 1463
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-LFHQEYNTFATGGS 129
V++++F + A+G D V +W + + L F + + S +F + A+G
Sbjct: 1329 VSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSG 1388
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +W + K L ++ + S+ FS D
Sbjct: 1389 DQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPD 1421
Score = 31.2 bits (69), Expect = 3.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 113 ITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
+T F + FATG S G V W+ K L +++ + S+ FS D
Sbjct: 868 LTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQD 917
Score = 30.0 bits (66), Expect = 7.2, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V +I F + A+G D V +W+ + + L H + + S+ F + A+G
Sbjct: 1413 VGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSD 1472
Query: 130 DGYVNIWD 137
D + +WD
Sbjct: 1473 DETIKLWD 1480
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 72 NAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD 130
N + F+Q A+ G+D V +WD K L + ++ G++SL FH N T SD
Sbjct: 190 NYVDFNQMGTCVASAGADSTVKVWDIRMNKLLQHYQVHNAGVSSLSFHPSGNYLLTASSD 249
Query: 131 GYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
G + I D + + H + + S+ FS
Sbjct: 250 GTLKILDLLEGRLIYTLHGHQGPVLSVTFS 279
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF 83
N+ G ++S + V+ D M K+ ++ H V+++SFH N
Sbjct: 195 NQMGTCVASAGADSTVKVWDI--RMNKLLQHYQVHNAG---------VSSLSFHPSGNYL 243
Query: 84 ATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIW----DG 138
T SDG + I D + + H + + S+ F + + FA+G +D V +W D
Sbjct: 244 LTASSDGTLKILDLLEGRLIYTLHGHQGPVLSVTFSKSGDQFASGATDAQVLVWKTNFDK 303
Query: 139 FNKKRLCQFHRYDT 152
++ K + + + T
Sbjct: 304 YSVKEIVKLQQKRT 317
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V++I FH + F TG +D V IWD N+ F + + S+ F + ATG
Sbjct: 341 VHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSE 400
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTG-ITSLCF 159
DG V +WD K L F + I SL F
Sbjct: 401 DGEVKLWDLRKLKNLKTFANEEKQPINSLSF 431
Score = 36.6 bits (83), Expect = 0.077, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH---RYDTGITSL-FHQEYNTFA 125
PV IS + + + D Y D + K LC+ + S+ FH + F
Sbjct: 295 PVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFG 354
Query: 126 TGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
TG +D V IWD N+ F + + S+ FS
Sbjct: 355 TGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFS 389
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 72 NAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD 130
N + F+ A+ G D V +WD K L + ++ G+ SL FH N T +D
Sbjct: 190 NYVDFNPMGTCVASAGVDSTVKVWDIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTASND 249
Query: 131 GYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
G V I D + + H + + S+ FS
Sbjct: 250 GTVKILDLLEGRLIYTLHGHQGPVLSVAFS 279
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VN++SFH N T +DG V I D + + H + + S+ F + + FA+G +
Sbjct: 231 VNSLSFHPSGNYLLTASNDGTVKILDLLEGRLIYTLHGHQGPVLSVAFSKSGDQFASGAT 290
Query: 130 DGYVNIW----DGFNKKRLCQFHRYDT 152
D V +W D +N K + + + T
Sbjct: 291 DAQVLVWKTNFDKYNIKEIVKLQQKRT 317
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V+ + FH N ATG SD V +WD + + + ++SL F A+G
Sbjct: 537 VDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSV 596
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D + IWD N + R+ + +T++ FS D
Sbjct: 597 DHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRD 629
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH---RYDTGITSLFHQEYNTFAT 126
PV I FH++ F +GG D + +W+ K R C F D T+ FH EY +
Sbjct: 53 PVRGIDFHKQQPLFVSGGDDYKIKVWN--YKLRRCLFTLLGHLDYIRTTFFHHEYPWILS 110
Query: 127 GGSDGYVNIWD-----------GFNKKRLC-QFH 148
D + +W+ G N +C QFH
Sbjct: 111 ASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFH 144
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC----QFHRYDTGITSL-FHQEYNTFA 125
V +SFH + T +G + +WD R+C +F +D + + FH++ F
Sbjct: 12 VKGLSFHPKRPWILTSLHNGVIQLWD----YRMCTLIDKFDEHDGPVRGIDFHKQQPLFV 67
Query: 126 TGGSDGYVNIWDGFNKKRLCQF 147
+GG D + +W+ K R C F
Sbjct: 68 SGGDDYKIKVWN--YKLRRCLF 87
Score = 30.4 bits (67), Expect = 5.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKR----LCQFHRYDTGITSLFHQEYNTFAT 126
VN +FH +G D V IW K C+ H Y+ ++FH +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGH-YNNVSCAVFHPRQELILS 266
Query: 127 GGSDGYVNIWDGFNKKRLCQFHR 149
D + +WD + + F R
Sbjct: 267 NSEDKSIRVWDMSKRTGVQTFRR 289
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH---RYDTGITSLFHQEYNTFAT 126
PV I FH++ F +GG D + +W+ K R C F D T+ FH EY +
Sbjct: 53 PVRGIDFHKQQPLFVSGGDDYKIKVWN--YKLRRCLFTLLGHLDYIRTTFFHHEYPWILS 110
Query: 127 GGSDGYVNIWD-----------GFNKKRLC-QFH 148
D + +W+ G N +C QFH
Sbjct: 111 ASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFH 144
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC----QFHRYDTGITSL-FHQEYNTFA 125
V +SFH + T +G + +WD R+C +F +D + + FH++ F
Sbjct: 12 VKGLSFHPKRPWILTSLHNGVIQLWD----YRMCTLIDKFDEHDGPVRGIDFHKQQPLFV 67
Query: 126 TGGSDGYVNIWDGFNKKRLCQF 147
+GG D + +W+ K R C F
Sbjct: 68 SGGDDYKIKVWN--YKLRRCLF 87
Score = 30.4 bits (67), Expect = 5.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKR----LCQFHRYDTGITSLFHQEYNTFAT 126
VN +FH +G D V IW K C+ H Y+ ++FH +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGH-YNNVSCAVFHPRQELILS 266
Query: 127 GGSDGYVNIWDGFNKKRLCQFHR 149
D + +WD + + F R
Sbjct: 267 NSEDKSIRVWDMSKRTGVQTFRR 289
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH---RYDTGITSLFHQEYNTFAT 126
PV I FH++ F +GG D + +W+ K R C F D T+ FH EY +
Sbjct: 53 PVRGIDFHKQQPLFVSGGDDYKIKVWN--YKLRRCLFTLLGHLDYIRTTFFHHEYPWILS 110
Query: 127 GGSDGYVNIWD-----------GFNKKRLC-QFH 148
D + +W+ G N +C QFH
Sbjct: 111 ASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFH 144
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC----QFHRYDTGITSL-FHQEYNTFA 125
V +SFH + T +G + +WD R+C +F +D + + FH++ F
Sbjct: 12 VKGLSFHPKRPWILTSLHNGVIQLWD----YRMCTLIDKFDEHDGPVRGIDFHKQQPLFV 67
Query: 126 TGGSDGYVNIWDGFNKKRLCQF 147
+GG D + +W+ K R C F
Sbjct: 68 SGGDDYKIKVWN--YKLRRCLF 87
Score = 30.4 bits (67), Expect = 5.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKR----LCQFHRYDTGITSLFHQEYNTFAT 126
VN +FH +G D V IW K C+ H Y+ ++FH +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGH-YNNVSCAVFHPRQELILS 266
Query: 127 GGSDGYVNIWDGFNKKRLCQFHR 149
D + +WD + + F R
Sbjct: 267 NSEDKSIRVWDMSKRTGVQTFRR 289
>sp|P0CS44|MDV1_CRYNJ Mitochondrial division protein 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MDV1 PE=3 SV=1
Length = 757
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGS 129
P+ A+ F + Y T G D V +WD + + + Q R G E TGG+
Sbjct: 357 PITALDFDEPYGMLVTAGQDDVVKVWDLCDGEEIGQL-RGHRGTVKALQVEDTLCLTGGA 415
Query: 130 DGYVNIWD 137
DG V +WD
Sbjct: 416 DGNVRLWD 423
Score = 37.7 bits (86), Expect = 0.029, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 83 FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-----LFHQEYNTFATGGSDGYVNIWD 137
A+G DG V +WD R Q HR G T+ F ++Y TG D V IWD
Sbjct: 623 LASGSGDGGVRMWD----MRTGQAHRTLIGHTAPVTCLQFDEQY--IVTGSLDRTVRIWD 676
Query: 138 GFNKKRLCQFHRYDTGITSLCF 159
+ + H+Y+ +T+L F
Sbjct: 677 -LRMGSVSEVHKYEYPVTALQF 697
>sp|P0CS45|MDV1_CRYNB Mitochondrial division protein 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=MDV1 PE=3 SV=1
Length = 757
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGS 129
P+ A+ F + Y T G D V +WD + + + Q R G E TGG+
Sbjct: 357 PITALDFDEPYGMLVTAGQDDVVKVWDLCDGEEIGQL-RGHRGTVKALQVEDTLCLTGGA 415
Query: 130 DGYVNIWD 137
DG V +WD
Sbjct: 416 DGNVRLWD 423
Score = 37.7 bits (86), Expect = 0.029, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 83 FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-----LFHQEYNTFATGGSDGYVNIWD 137
A+G DG V +WD R Q HR G T+ F ++Y TG D V IWD
Sbjct: 623 LASGSGDGGVRMWD----MRTGQAHRTLIGHTAPVTCLQFDEQY--IVTGSLDRTVRIWD 676
Query: 138 GFNKKRLCQFHRYDTGITSLCF 159
+ + H+Y+ +T+L F
Sbjct: 677 -LRMGSVSEVHKYEYPVTALQF 697
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V + FH A G D V +WD + L + + + +L FH N T S
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASS 249
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
D + I D + L H + T++ FS
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VNA+SFH N T SD + I D + L H + T++ F + FA+GGS
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGS 291
Query: 130 DGYVNIW 136
D V +W
Sbjct: 292 DEQVMVW 298
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VN FH N ATG +D V +WD N + F + I SL F ATG +
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGAT 689
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
DG V +WD + + + + + SL FS D
Sbjct: 690 DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 722
Score = 37.0 bits (84), Expect = 0.054, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG 128
P+++++F ATG +DG V +WD + + + + + SL F ++ A+G
Sbjct: 671 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 730
Query: 129 SDGYVNIWDG 138
D V +WD
Sbjct: 731 MDNTVRLWDA 740
>sp|Q6CJ50|MDV1_KLULA Mitochondrial division protein 1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=MDV1 PE=3 SV=1
Length = 705
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 71 VNAISFHQEYNTFATGGS-DGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGS 129
+ + F + T + GS D V +WD KK++ H + I+ + +Y+T TGG
Sbjct: 400 ITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGR 459
Query: 130 DGYVNIWD 137
D + +WD
Sbjct: 460 DAVLKLWD 467
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 83 FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKK 142
ATG DG V +WD + K + + ITSL N TG D + IWD
Sbjct: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN-LVTGAMDRSIRIWD-LRTG 627
Query: 143 RLCQFHRYDTGITSLCFSYD 162
L Y+ ITSL F D
Sbjct: 628 ILSDVFAYEQPITSLHFDLD 647
>sp|Q229Z6|POC1_TETTS POC1 centriolar protein homolog OS=Tetrahymena thermophila (strain
SB210) GN=TTHERM_01308010 PE=3 SV=1
Length = 634
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VN+IS H A+ GSD + IWD +++ + D IT++ F+Q + FATGGS
Sbjct: 275 VNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGS 334
Query: 130 DGYVNIW 136
+W
Sbjct: 335 QNLCMVW 341
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V+ + FH + + D + I D + K + ++ +D + S+ H A+ GS
Sbjct: 233 VSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGS 292
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
D + IWD +++ + D IT++ F+
Sbjct: 293 DSKIKIWDLRQGRQIYTLYSNDKDITTVQFN 323
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG 128
PV A++ + +T A+ S+G +++WD +R+ + I SL F +E +GG
Sbjct: 507 PVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGG 566
Query: 129 SDGYVNIWDGF 139
SD V WD F
Sbjct: 567 SDCTVRAWDVF 577
Score = 38.5 bits (88), Expect = 0.019, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V+ ++FH TG SD +WD + F+ + +T++ + +T A+ S
Sbjct: 466 VDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADS 525
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
+G +++WD +R+ + I SL FS
Sbjct: 526 EGLIHLWDIGTGRRIKTMRGHRGNIYSLSFS 556
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY-DTGITSL-FHQEYNTFATG 127
PV +I+ + +TG DG +N+WD KRL Q + I SL + +E N +G
Sbjct: 653 PVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISG 712
Query: 128 GSDGYVNIWD 137
G+D V +WD
Sbjct: 713 GADHTVRVWD 722
Score = 36.6 bits (83), Expect = 0.065, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V+ +SFH TG SD +WD + F + + S+ + +TG
Sbjct: 612 VDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSE 671
Query: 130 DGYVNIWDGFNKKRLCQFHRY-DTGITSLCFS 160
DG +N+WD KRL Q + I SL +S
Sbjct: 672 DGIINVWDIGTGKRLKQMRGHGKNAIYSLSYS 703
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V + FH A G D V +WD + L + + + +L FH N T S
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 249
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
D + I D + L H + T++ FS
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 53 YAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTG 112
+ + HR+ + VNA+SFH N T SD + I D + L H +
Sbjct: 214 WDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP 273
Query: 113 ITSL-FHQEYNTFATGGSDGYVNIW 136
T++ F + FA+GGSD V +W
Sbjct: 274 ATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V ++F + A+G D V IW K F + + S+ F + +F T
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +W +K L ++ + FS D
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPD 156
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VN++SFH N T +D + + D + L H + +TS+ F +E FA+GGS
Sbjct: 231 VNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFSREGEFFASGGS 290
Query: 130 DGYVNIW----DGFNKKRLCQFHRYD 151
D V +W D + L ++ ++D
Sbjct: 291 DEQVMVWKTNFDSASYADLLKYRQHD 316
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS--LFHQEYNTFATGG 128
VN + FH A +D V +WD +L Q ++ +G+ + FH N T
Sbjct: 189 VNFVDFHPSGTCIAAAATDNTVKVWD-IRMNKLIQHYQVHSGVVNSLSFHPSGNYLITAS 247
Query: 129 SDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
+D + + D + L H + +TS+ FS
Sbjct: 248 NDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFS 279
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 10/118 (8%)
Query: 46 PEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQ 105
PE ++ FK HR V + F+ A+G D + IW+ + R +
Sbjct: 5 PEDPSLERHFKGHRDT---------VTTVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYR 55
Query: 106 FHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
F + I S+ F + A+ D V +W K F + + S+ FS D
Sbjct: 56 FVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGD 113
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIW----DGFNKKRLCQFHRYD 110
PV ++ F +E FA+GGSD V +W D + L ++ ++D
Sbjct: 272 PVTSVKFSREGEFFASGGSDEQVMVWKTNFDSASYADLLKYRQHD 316
>sp|Q6NLV4|FY_ARATH Flowering time control protein FY OS=Arabidopsis thaliana GN=FY
PE=1 SV=1
Length = 647
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 69 YPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATG 127
+ V ++ +H + +GG D V +WD + + LC H + + S+ ++Q N T
Sbjct: 250 WDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTA 309
Query: 128 GSDGYVNIWDGFNKKRLCQFHRYDTGITSLCF 159
D + ++D K L F + +TSL +
Sbjct: 310 SKDQIIKLYDIRTMKELQSFRGHTKDVTSLAW 341
>sp|O74319|TAF73_SCHPO Transcription initiation factor TFIID subunit taf73
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf73 PE=1 SV=1
Length = 642
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V+ +SFH ATG SD +WD + F+ + + +++L + + A+
Sbjct: 490 VDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADE 549
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
G + +WD + + F ++ + + SL FSYD
Sbjct: 550 SGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYD 582
Score = 37.0 bits (84), Expect = 0.052, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG 128
PV+A+ + + A+ G + +WD + + F ++ + + SL F + +GG
Sbjct: 531 PVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGG 590
Query: 129 SDGYVNIW---------DGFNKKRLCQFHRYDTGITSLCFS 160
+D VN W DG L F +T I +L F+
Sbjct: 591 ADTDVNFWDLTYRNNLSDGEQSPLLFNFKTKNTIIQNLSFT 631
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VN +H N ATG +D V +WD N + F + I SL F ATG +
Sbjct: 631 VNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGAT 690
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
DG V +WD + + + + + SL FS D
Sbjct: 691 DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 723
Score = 37.0 bits (84), Expect = 0.054, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG 128
P+++++F ATG +DG V +WD + + + + + SL F ++ A+G
Sbjct: 672 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 731
Query: 129 SDGYVNIWDG 138
D V +WD
Sbjct: 732 MDNTVRLWDA 741
>sp|B3M1G0|WDR55_DROAN WD repeat-containing protein 55 homolog OS=Drosophila ananassae
GN=GF18399 PE=3 SV=1
Length = 481
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 44 TGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103
T E +K+K ++ +D I ++ +N N FATG G V +WD K+ +
Sbjct: 217 TDMETEKLKKLYET--AHDDAINTLHVLNE-------NLFATGDDAGTVKLWDLRTKQHV 267
Query: 104 CQFHRYDTGITSLFHQEYNTFATGGS-DGYVNIWDGFNKKRLCQFHRYD 151
+ + D +T L E NT S DGY+ ++ +K Q Y+
Sbjct: 268 FELKQIDDQVTQLLSNEQNTLLLATSADGYLTTFNIPGRKLYVQSEPYE 316
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 74 ISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR--YDTGITSLFHQEYNTFATGGSDG 131
+ F ++ T D V + D ++L + + +D I +L N FATG G
Sbjct: 196 VEFTEDGRNLLTCSKDKCVMVTD-METEKLKKLYETAHDDAINTLHVLNENLFATGDDAG 254
Query: 132 YVNIWDGFNKKRLCQFHRYDTGITSL 157
V +WD K+ + + + D +T L
Sbjct: 255 TVKLWDLRTKQHVFELKQIDDQVTQL 280
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
N + F A+ GSD V IWD + L + + G+ L FH N+ T S
Sbjct: 189 ANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASS 248
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
DG V I D + + + + ++ FS D
Sbjct: 249 DGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKD 281
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTG--ITSLFHQEYNTFATGG 128
VN +SFH N+ T SDG V I D + RL + TG T F ++ F +GG
Sbjct: 231 VNCLSFHPSGNSLVTASSDGTVKILD-LVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGG 289
Query: 129 SDGYVNIW-DGFNK 141
+D V +W FN+
Sbjct: 290 ADAQVLVWRTSFNQ 303
Score = 30.0 bits (66), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGIT-SLFHQEYNTFATGG 128
PV ++ F + T D + +W + ++ L +R+ + + F + +
Sbjct: 104 PVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163
Query: 129 SDGYVNIWDGFNKKRLCQF 147
D + IWD +K+ + F
Sbjct: 164 EDKTIKIWDTTSKQCVNNF 182
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VN + F + +GG D V +WD K L +F ++ I SL FH ATG +
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSA 205
Query: 130 DGYVNIWD 137
D V WD
Sbjct: 206 DRTVKFWD 213
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 73 AISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG 131
++ FH FA+G D + IWD K + + + G+ L F + +GG D
Sbjct: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDN 165
Query: 132 YVNIWDGFNKKRLCQFHRYDTGITSLCF 159
V +WD K L +F ++ I SL F
Sbjct: 166 IVKVWDLTAGKLLTEFKSHEGQIQSLDF 193
Score = 36.2 bits (82), Expect = 0.081, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Query: 35 GRAAVEYLDTGPEMQKMK-YAFKCHRIKEDGIEKIYP----VNAISFHQEYNTFATGGSD 89
GR + L TG E K+ +A K + I +Y +++++F A G +
Sbjct: 25 GRKSSRVLVTGGEDHKVNLWAIG----KPNAILSLYGHSSGIDSVTFDASEVLVAAGAAS 80
Query: 90 GYVNIWDGFNKK--RLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147
G + +WD K R HR + I+ FH FA+G D + IWD K + +
Sbjct: 81 GTIKLWDLEEAKIVRTLTGHRSNC-ISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
Query: 148 HRYDTGITSLCFSYD 162
+ G+ L F+ D
Sbjct: 140 KGHTRGVNVLRFTPD 154
>sp|Q9VU65|POC1_DROME POC1 centriolar protein homolog OS=Drosophila melanogaster GN=Poc1
PE=2 SV=1
Length = 391
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 18/130 (13%)
Query: 34 EGRAAVEYLDTGPEMQKMKYAFKCHRIK-----EDGIEKIY-----PVNAISFHQEYNTF 83
E RAA L P + A C+RIK + ++Y PVN ++FH +
Sbjct: 184 EERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFL 243
Query: 84 ATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142
+G D + I D + + + + ++ F ++ + FATGGSD + +W
Sbjct: 244 LSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQ----- 298
Query: 143 RLCQFHRYDT 152
H YD
Sbjct: 299 --SNLHTYDA 306
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 5/124 (4%)
Query: 38 AVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDG 97
A D+ + + A +C R PVN +++ + N A+ G D V IW+
Sbjct: 34 ATSSTDSTVILWNLNQAARCIRFASHSA----PVNGVAWSPKGNLVASAGHDRTVKIWEP 89
Query: 98 FNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS 156
+ +F + + S+ F + T D IW ++ + F + + + S
Sbjct: 90 KLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRS 149
Query: 157 LCFS 160
FS
Sbjct: 150 AKFS 153
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
N + F+ A+ GSD V IWD K L + + G+ L FH N+ T S
Sbjct: 189 ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASS 248
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
DG V + D + + + + ++ FS D
Sbjct: 249 DGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKD 281
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Query: 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF 83
N G ++S AV+ D M K+ ++ H VN +SFH N+
Sbjct: 195 NPNGTCIASAGSDHAVKIWDI--RMNKLLQHYQVHSCG---------VNCLSFHPLGNSL 243
Query: 84 ATGGSDGYVNIWDGFNKKRLCQFHRYDTGI-TSLFHQEYNTFATGGSDGYVNIW 136
T SDG V + D + + + + T F ++ +GG+D V IW
Sbjct: 244 VTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGIT-SLFHQEYNTFATGG 128
PV ++ F + T D + +W F ++ L +R+ + + F + +
Sbjct: 104 PVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163
Query: 129 SDGYVNIWDGFNKK 142
D + IWD NK+
Sbjct: 164 EDKTIKIWDTTNKQ 177
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V + FH A G D V +WD + L + + + L FH N T S
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
D + I D + L H + T++ FS
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 53 YAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTG 112
+ + HR+ + VN +SFH N T SD + I D + L H +
Sbjct: 214 WDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGP 273
Query: 113 ITSL-FHQEYNTFATGGSDGYVNIW 136
T++ F + FA+GGSD V +W
Sbjct: 274 ATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V ++F + A+G D V IW K F + + S+ F + +F T
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +W +K L ++ + FS D
Sbjct: 124 DKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 156
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
VN++SFH N T +D + + D + L H + +T + F +E + FA+GGS
Sbjct: 231 VNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFFASGGS 290
Query: 130 DGYVNIW----DGFNKKRLCQFHRYDT 152
D V +W D + L ++ + DT
Sbjct: 291 DEQVMVWKTNFDAGSYPDLLKYRQNDT 317
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS--LFHQEYNTFATGG 128
VN + FH A +D V +WD +L Q ++ +G+ + FH N T
Sbjct: 189 VNFVDFHPSGTCIAAAATDNTVKVWD-IRMNKLIQHYQVHSGVVNSLSFHPSGNYLITAS 247
Query: 129 SDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160
+D + + D + L H + +T + FS
Sbjct: 248 NDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFS 279
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129
V A+ F+ A+G D + +W+ + R +F + I S+ F + A+
Sbjct: 21 VTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFVGHKDAILSVDFSPSGHLIASASR 80
Query: 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
D V +W K F + + S+ FS D
Sbjct: 81 DKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGD 113
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 70 PVNAISFHQEYNTFATGGSDGYVNIW----DGFNKKRLCQFHRYDT 111
PV + F +E + FA+GGSD V +W D + L ++ + DT
Sbjct: 272 PVTCVKFSREGDFFASGGSDEQVMVWKTNFDAGSYPDLLKYRQNDT 317
>sp|Q9HCU5|PREB_HUMAN Prolactin regulatory element-binding protein OS=Homo sapiens
GN=PREB PE=1 SV=2
Length = 417
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 63 DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYN 122
D ++K+ + F+ + ATGG+DGYV +W + +++ +F ++ I L
Sbjct: 154 DPLQKV-----VCFNHDNTLLATGGTDGYVRVWKVPSLEKVLEFKAHEGEIEDLALGPDG 208
Query: 123 TFATGGSDGYVNIWDGFNKKRLCQFHRYDTGIT 155
T G D ++W + + Q H + G T
Sbjct: 209 KLVTVGRDLKASVWQ--KDQLVTQLHWQENGPT 239
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 117 FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162
F+ + ATGG+DGYV +W + +++ +F ++ I L D
Sbjct: 162 FNHDNTLLATGGTDGYVRVWKVPSLEKVLEFKAHEGEIEDLALGPD 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,748,433
Number of Sequences: 539616
Number of extensions: 2607977
Number of successful extensions: 8560
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 553
Number of HSP's that attempted gapping in prelim test: 6367
Number of HSP's gapped (non-prelim): 2285
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)