Query psy1859
Match_columns 162
No_of_seqs 239 out of 1176
Neff 11.7
Searched_HMMs 46136
Date Fri Aug 16 18:06:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1859.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1859hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 100.0 1E-29 2.2E-34 167.3 13.4 145 4-161 103-257 (480)
2 KOG0272|consensus 100.0 1.2E-30 2.7E-35 173.0 8.2 136 14-162 262-398 (459)
3 KOG0263|consensus 100.0 2E-29 4.3E-34 177.6 13.4 152 7-162 445-630 (707)
4 KOG0272|consensus 100.0 4.4E-28 9.6E-33 161.0 11.3 139 11-162 301-441 (459)
5 KOG0271|consensus 100.0 4.1E-27 8.8E-32 155.2 13.6 98 65-162 364-462 (480)
6 KOG0284|consensus 100.0 1.9E-28 4E-33 162.3 6.6 139 10-161 177-316 (464)
7 KOG0266|consensus 100.0 2E-26 4.4E-31 162.4 17.0 141 10-162 200-345 (456)
8 KOG0279|consensus 99.9 3.2E-26 7E-31 145.3 14.5 135 15-162 65-203 (315)
9 KOG0284|consensus 99.9 3.2E-27 6.8E-32 156.5 8.3 140 10-162 135-275 (464)
10 KOG0266|consensus 99.9 1.6E-25 3.4E-30 157.9 16.9 140 12-162 158-299 (456)
11 KOG0279|consensus 99.9 2E-25 4.4E-30 141.7 15.5 139 11-162 103-244 (315)
12 PTZ00421 coronin; Provisional 99.9 6.2E-25 1.3E-29 155.2 18.5 143 10-161 72-221 (493)
13 KOG0273|consensus 99.9 7.7E-25 1.7E-29 147.5 15.7 152 9-162 272-463 (524)
14 KOG0645|consensus 99.9 2.7E-24 5.8E-29 136.2 16.3 141 11-162 59-206 (312)
15 KOG0276|consensus 99.9 4E-25 8.7E-30 153.6 12.6 140 11-162 95-238 (794)
16 KOG0285|consensus 99.9 7.4E-25 1.6E-29 143.6 13.0 141 8-161 146-287 (460)
17 KOG0286|consensus 99.9 2.8E-24 6E-29 137.5 14.9 137 16-162 100-240 (343)
18 KOG0319|consensus 99.9 1E-24 2.2E-29 153.5 12.7 139 11-162 461-600 (775)
19 KOG0286|consensus 99.9 7.4E-24 1.6E-28 135.5 15.0 141 7-161 139-283 (343)
20 KOG0315|consensus 99.9 1.4E-23 3.1E-28 131.7 15.9 144 4-162 75-269 (311)
21 KOG0273|consensus 99.9 5.3E-24 1.2E-28 143.5 14.9 144 3-161 350-503 (524)
22 KOG0263|consensus 99.9 2.5E-24 5.4E-29 152.2 12.8 118 10-140 532-650 (707)
23 KOG0275|consensus 99.9 1.1E-25 2.3E-30 146.4 4.6 148 10-162 210-359 (508)
24 KOG0645|consensus 99.9 6.2E-23 1.3E-27 130.1 16.7 146 7-161 8-160 (312)
25 KOG0295|consensus 99.9 1.6E-23 3.6E-28 137.3 14.3 134 15-161 237-386 (406)
26 PTZ00420 coronin; Provisional 99.9 9.5E-23 2.1E-27 145.3 18.7 137 10-156 71-214 (568)
27 KOG0277|consensus 99.9 2.4E-23 5.1E-28 131.1 13.1 138 11-161 102-244 (311)
28 KOG0283|consensus 99.9 3.7E-23 8E-28 147.2 13.0 154 6-162 260-462 (712)
29 KOG0265|consensus 99.9 4.6E-22 1E-26 127.7 14.9 142 9-162 43-227 (338)
30 KOG0291|consensus 99.9 2.7E-22 5.9E-27 142.1 15.0 137 13-162 350-489 (893)
31 KOG0285|consensus 99.9 2.3E-22 4.9E-27 132.1 13.3 142 8-162 185-330 (460)
32 KOG0315|consensus 99.9 6.1E-22 1.3E-26 124.5 14.7 153 8-160 119-309 (311)
33 KOG0308|consensus 99.9 2.5E-22 5.4E-27 140.1 14.0 152 9-162 113-266 (735)
34 KOG0316|consensus 99.9 6E-22 1.3E-26 123.7 13.0 120 9-141 13-133 (307)
35 KOG0292|consensus 99.9 1.1E-22 2.5E-27 146.3 11.0 135 14-161 10-145 (1202)
36 KOG0282|consensus 99.9 2.8E-23 6.2E-28 140.3 7.4 140 10-162 211-353 (503)
37 cd00200 WD40 WD40 domain, foun 99.9 1E-20 2.2E-25 125.2 18.5 139 11-162 7-146 (289)
38 KOG0302|consensus 99.9 3.7E-22 8E-27 131.7 11.2 140 12-162 210-358 (440)
39 KOG0264|consensus 99.9 6.4E-22 1.4E-26 132.6 12.2 137 17-162 181-327 (422)
40 KOG0772|consensus 99.9 1.4E-22 3E-27 138.4 9.0 144 12-162 264-420 (641)
41 KOG0289|consensus 99.9 2.8E-21 6.2E-26 129.5 14.5 144 7-161 297-442 (506)
42 KOG0641|consensus 99.9 7.4E-21 1.6E-25 118.6 15.3 157 5-162 81-284 (350)
43 KOG0319|consensus 99.9 1.9E-21 4.1E-26 137.3 13.8 154 8-161 360-557 (775)
44 KOG0973|consensus 99.9 2.5E-21 5.4E-26 141.2 14.5 143 11-162 67-230 (942)
45 KOG0306|consensus 99.9 1.7E-21 3.7E-26 138.0 13.3 141 9-162 504-645 (888)
46 KOG0647|consensus 99.9 3.8E-21 8.2E-26 123.7 12.9 130 8-149 22-155 (347)
47 KOG0295|consensus 99.9 7.1E-21 1.5E-25 125.1 14.2 137 12-161 192-344 (406)
48 KOG0318|consensus 99.9 1.2E-20 2.5E-25 129.2 15.7 146 4-159 178-371 (603)
49 KOG0292|consensus 99.9 6.6E-21 1.4E-25 137.4 13.7 138 11-161 49-216 (1202)
50 KOG0275|consensus 99.9 6.4E-22 1.4E-26 129.0 7.5 137 11-159 261-400 (508)
51 cd00200 WD40 WD40 domain, foun 99.9 6.6E-20 1.4E-24 121.3 17.3 138 12-162 134-272 (289)
52 PLN00181 protein SPA1-RELATED; 99.9 4.1E-20 8.9E-25 138.6 18.1 139 12-161 482-627 (793)
53 KOG0293|consensus 99.9 9.1E-21 2E-25 126.6 12.4 146 6-162 217-365 (519)
54 KOG0318|consensus 99.9 5.5E-20 1.2E-24 125.9 16.4 149 12-162 58-246 (603)
55 KOG0277|consensus 99.9 1.1E-20 2.4E-25 119.1 12.1 137 13-161 60-200 (311)
56 KOG0269|consensus 99.9 3.7E-21 8E-26 136.5 10.6 138 11-162 131-274 (839)
57 KOG1446|consensus 99.9 1.1E-19 2.3E-24 117.5 16.3 155 6-162 93-286 (311)
58 PTZ00421 coronin; Provisional 99.9 5.2E-20 1.1E-24 130.4 16.2 142 17-162 24-179 (493)
59 KOG1407|consensus 99.9 5.2E-21 1.1E-25 121.0 9.8 140 12-162 19-242 (313)
60 KOG1407|consensus 99.9 2.7E-20 5.8E-25 117.8 12.9 138 11-162 145-283 (313)
61 KOG0305|consensus 99.9 8.3E-21 1.8E-25 131.6 11.4 135 13-161 217-353 (484)
62 KOG0973|consensus 99.9 1.4E-20 3E-25 137.4 12.7 150 10-161 10-181 (942)
63 KOG0296|consensus 99.9 7E-20 1.5E-24 120.4 14.7 139 11-162 62-201 (399)
64 KOG0306|consensus 99.9 4.4E-20 9.5E-25 131.0 14.4 148 11-162 452-603 (888)
65 KOG0267|consensus 99.9 8.6E-22 1.9E-26 138.9 5.9 139 10-161 67-206 (825)
66 KOG0302|consensus 99.9 1.7E-20 3.6E-25 124.0 11.2 117 12-139 256-378 (440)
67 KOG0772|consensus 99.8 4.4E-20 9.5E-25 126.4 13.4 148 15-162 169-375 (641)
68 KOG0296|consensus 99.8 1.1E-19 2.3E-24 119.6 14.6 128 8-148 101-229 (399)
69 KOG0264|consensus 99.8 3.9E-20 8.5E-25 124.2 12.5 144 8-162 222-384 (422)
70 KOG0640|consensus 99.8 4.1E-20 8.8E-25 119.8 11.7 154 8-161 107-271 (430)
71 KOG0291|consensus 99.8 2.1E-19 4.6E-24 127.6 16.3 136 12-160 306-444 (893)
72 KOG0310|consensus 99.8 5.1E-20 1.1E-24 124.8 12.2 140 8-161 63-206 (487)
73 KOG1036|consensus 99.8 4.9E-20 1.1E-24 118.7 11.1 129 1-129 165-294 (323)
74 KOG1009|consensus 99.8 2.3E-19 5E-24 119.4 14.0 147 10-161 10-175 (434)
75 PLN00181 protein SPA1-RELATED; 99.8 7.4E-19 1.6E-23 131.9 18.5 137 11-162 573-719 (793)
76 KOG0276|consensus 99.8 1.7E-19 3.7E-24 126.0 13.9 141 9-162 9-151 (794)
77 KOG0313|consensus 99.8 1.5E-19 3.3E-24 119.4 12.7 134 13-161 260-399 (423)
78 KOG0281|consensus 99.8 1.2E-20 2.6E-25 124.0 6.2 146 10-161 234-410 (499)
79 KOG0640|consensus 99.8 2.2E-19 4.7E-24 116.5 11.6 126 14-149 217-345 (430)
80 PTZ00420 coronin; Provisional 99.8 1.6E-18 3.5E-23 123.9 16.4 117 32-162 51-178 (568)
81 KOG0639|consensus 99.8 2.1E-20 4.7E-25 127.8 6.4 137 14-162 466-603 (705)
82 KOG4283|consensus 99.8 1.5E-18 3.3E-23 111.9 14.2 155 6-161 36-198 (397)
83 KOG0293|consensus 99.8 9E-19 2E-23 117.2 13.6 154 9-162 308-493 (519)
84 KOG0313|consensus 99.8 4.6E-19 1E-23 117.2 12.1 141 10-161 190-355 (423)
85 KOG1273|consensus 99.8 1.3E-18 2.8E-23 113.1 13.5 131 16-160 26-205 (405)
86 KOG0643|consensus 99.8 3.4E-18 7.3E-23 108.8 14.7 139 10-162 49-201 (327)
87 KOG0289|consensus 99.8 1.2E-18 2.6E-23 117.1 13.0 144 6-162 251-400 (506)
88 KOG0310|consensus 99.8 3.3E-18 7.2E-23 116.1 15.1 142 6-162 146-290 (487)
89 KOG2394|consensus 99.8 1.1E-18 2.4E-23 120.0 12.9 148 14-161 220-384 (636)
90 KOG0305|consensus 99.8 2.9E-18 6.2E-23 119.2 14.8 137 12-162 300-442 (484)
91 KOG1274|consensus 99.8 2.4E-18 5.1E-23 124.4 14.6 149 5-162 130-281 (933)
92 KOG0282|consensus 99.8 1.7E-19 3.6E-24 122.3 8.2 120 12-145 257-378 (503)
93 KOG0300|consensus 99.8 1.8E-19 3.9E-24 117.4 8.1 153 10-162 187-368 (481)
94 KOG0283|consensus 99.8 1.3E-18 2.8E-23 124.4 13.1 131 14-161 370-511 (712)
95 KOG1446|consensus 99.8 9.2E-18 2E-22 108.6 15.6 148 12-162 13-198 (311)
96 KOG0303|consensus 99.8 8.5E-19 1.8E-23 116.7 11.1 133 10-152 78-216 (472)
97 KOG0267|consensus 99.8 1.5E-19 3.3E-24 127.8 8.0 137 13-162 112-249 (825)
98 KOG1332|consensus 99.8 4.5E-19 9.7E-24 111.4 9.1 147 4-161 2-159 (299)
99 KOG0316|consensus 99.8 2.7E-18 5.8E-23 107.6 12.4 137 9-162 55-194 (307)
100 KOG0274|consensus 99.8 7.4E-18 1.6E-22 120.1 16.1 135 10-161 246-381 (537)
101 KOG0294|consensus 99.8 4.5E-18 9.7E-23 110.3 13.0 134 12-161 42-178 (362)
102 KOG0269|consensus 99.8 4.6E-19 9.9E-24 126.1 8.4 135 18-162 92-231 (839)
103 KOG0641|consensus 99.8 2.3E-17 4.9E-22 103.2 14.7 147 9-162 179-330 (350)
104 KOG0278|consensus 99.8 6.1E-18 1.3E-22 106.9 12.1 132 10-143 140-301 (334)
105 KOG0265|consensus 99.8 7.3E-18 1.6E-22 108.6 12.6 137 13-162 174-319 (338)
106 KOG2096|consensus 99.8 4.9E-18 1.1E-22 110.6 11.5 151 11-162 84-289 (420)
107 KOG0278|consensus 99.8 1.6E-18 3.5E-23 109.5 8.9 136 14-162 101-278 (334)
108 KOG0288|consensus 99.8 1.2E-17 2.5E-22 111.7 13.0 144 14-161 220-441 (459)
109 KOG2445|consensus 99.8 2.6E-17 5.7E-22 106.5 14.1 150 3-161 3-179 (361)
110 KOG4283|consensus 99.8 1.8E-17 3.9E-22 107.0 13.3 141 8-162 96-257 (397)
111 KOG1036|consensus 99.8 2.8E-17 6.1E-22 106.2 14.1 143 1-160 1-144 (323)
112 KOG0646|consensus 99.8 1.3E-17 2.9E-22 112.8 12.9 143 10-161 120-329 (476)
113 KOG1063|consensus 99.8 6.5E-18 1.4E-22 119.1 11.6 144 7-161 519-674 (764)
114 KOG1332|consensus 99.8 2.6E-18 5.6E-23 108.1 8.6 142 10-162 53-218 (299)
115 KOG0771|consensus 99.8 1.3E-17 2.8E-22 111.5 11.9 135 14-162 145-335 (398)
116 KOG0281|consensus 99.8 1.3E-18 2.7E-23 114.6 6.7 120 24-160 329-458 (499)
117 KOG1539|consensus 99.8 4.5E-17 9.7E-22 117.0 14.3 140 12-162 447-628 (910)
118 KOG0646|consensus 99.8 3.7E-17 7.9E-22 110.7 12.6 139 9-161 77-227 (476)
119 KOG0307|consensus 99.7 2.6E-17 5.7E-22 121.3 10.7 154 8-161 111-306 (1049)
120 KOG1007|consensus 99.7 6.7E-17 1.4E-21 104.1 11.1 140 13-161 123-268 (370)
121 KOG1274|consensus 99.7 2.4E-16 5.1E-21 114.3 15.0 144 6-162 89-243 (933)
122 KOG1445|consensus 99.7 9.9E-18 2.1E-22 118.0 7.5 119 15-142 629-753 (1012)
123 KOG0647|consensus 99.7 1E-16 2.3E-21 103.5 11.2 125 2-128 187-312 (347)
124 PF08662 eIF2A: Eukaryotic tra 99.7 8.9E-16 1.9E-20 97.1 15.4 130 17-162 9-154 (194)
125 PF08662 eIF2A: Eukaryotic tra 99.7 5.6E-16 1.2E-20 98.0 14.4 120 9-147 55-186 (194)
126 KOG0299|consensus 99.7 1.3E-16 2.8E-21 107.9 11.5 136 11-160 200-336 (479)
127 KOG0299|consensus 99.7 9E-17 2E-21 108.7 10.5 147 10-158 139-293 (479)
128 KOG2055|consensus 99.7 6.7E-16 1.5E-20 104.7 14.4 153 10-162 210-446 (514)
129 KOG0270|consensus 99.7 1.6E-16 3.6E-21 107.0 11.1 131 17-161 247-383 (463)
130 KOG4328|consensus 99.7 1.6E-16 3.4E-21 107.6 11.1 147 7-162 180-380 (498)
131 KOG2919|consensus 99.7 1.2E-16 2.7E-21 104.2 10.1 138 11-161 205-350 (406)
132 KOG0274|consensus 99.7 2.3E-16 5E-21 112.6 11.7 136 8-159 283-421 (537)
133 KOG0643|consensus 99.7 2.8E-15 6E-20 95.7 15.2 137 11-161 8-157 (327)
134 KOG1273|consensus 99.7 1E-16 2.2E-21 104.4 8.8 90 71-161 26-116 (405)
135 KOG4378|consensus 99.7 6.8E-16 1.5E-20 105.9 12.5 132 16-161 167-303 (673)
136 KOG0308|consensus 99.7 6.3E-16 1.4E-20 108.7 12.0 118 11-141 169-287 (735)
137 KOG0270|consensus 99.7 1.6E-16 3.4E-21 107.1 8.3 136 25-161 192-339 (463)
138 KOG1408|consensus 99.7 9.1E-16 2E-20 109.4 12.2 93 70-162 598-694 (1080)
139 KOG0294|consensus 99.7 1.6E-15 3.6E-20 98.6 12.4 124 27-161 3-137 (362)
140 KOG0639|consensus 99.7 1.4E-15 3.1E-20 104.5 12.5 140 14-162 419-562 (705)
141 KOG2139|consensus 99.7 5.8E-15 1.2E-19 97.8 13.9 156 5-162 132-291 (445)
142 KOG0300|consensus 99.7 1.1E-15 2.4E-20 99.9 9.9 120 14-147 273-395 (481)
143 KOG1007|consensus 99.7 2E-15 4.3E-20 97.4 10.7 134 15-161 172-340 (370)
144 KOG1034|consensus 99.7 2.6E-15 5.6E-20 98.2 11.0 113 16-141 92-213 (385)
145 KOG1445|consensus 99.7 3.9E-16 8.5E-21 110.1 7.7 133 21-162 587-731 (1012)
146 KOG2096|consensus 99.7 3.1E-15 6.7E-20 97.7 11.2 136 17-162 232-384 (420)
147 KOG0301|consensus 99.7 6.4E-15 1.4E-19 104.3 13.5 125 16-160 143-268 (745)
148 KOG1523|consensus 99.7 4.3E-15 9.3E-20 96.9 11.6 142 11-162 8-157 (361)
149 KOG0649|consensus 99.6 7.9E-15 1.7E-19 92.7 12.0 134 10-148 59-195 (325)
150 KOG1524|consensus 99.6 1.6E-15 3.4E-20 105.1 9.6 135 12-162 103-238 (737)
151 KOG2394|consensus 99.6 1.5E-15 3.3E-20 104.9 8.9 93 14-119 291-384 (636)
152 KOG2106|consensus 99.6 2.9E-14 6.3E-19 98.1 14.9 130 15-162 370-502 (626)
153 KOG0288|consensus 99.6 5.9E-15 1.3E-19 99.0 11.1 121 7-136 335-458 (459)
154 KOG0268|consensus 99.6 1.7E-15 3.7E-20 100.2 8.3 135 14-162 188-326 (433)
155 KOG0290|consensus 99.6 7.7E-15 1.7E-19 94.8 11.1 126 11-140 94-228 (364)
156 TIGR03866 PQQ_ABC_repeats PQQ- 99.6 9.4E-14 2E-18 93.3 17.0 139 15-161 158-300 (300)
157 KOG0307|consensus 99.6 7.4E-16 1.6E-20 113.8 7.1 137 17-162 68-217 (1049)
158 KOG0301|consensus 99.6 1.1E-14 2.4E-19 103.1 11.2 125 14-159 102-227 (745)
159 KOG0290|consensus 99.6 3.4E-14 7.3E-19 91.9 12.2 140 11-161 148-345 (364)
160 KOG2055|consensus 99.6 2.4E-14 5.2E-19 97.3 11.8 139 12-162 343-493 (514)
161 KOG0303|consensus 99.6 1.7E-14 3.8E-19 96.5 10.7 97 65-162 78-184 (472)
162 KOG1009|consensus 99.6 6.7E-15 1.4E-19 98.5 8.7 125 9-142 61-198 (434)
163 KOG2110|consensus 99.6 1.7E-13 3.7E-18 90.9 14.9 127 25-162 97-229 (391)
164 KOG0268|consensus 99.6 5.5E-15 1.2E-19 97.8 7.7 138 9-162 62-240 (433)
165 KOG1539|consensus 99.6 3.2E-14 7E-19 102.7 11.5 128 11-139 491-648 (910)
166 KOG2048|consensus 99.6 1.9E-13 4.2E-18 96.7 14.5 141 10-162 107-256 (691)
167 KOG1188|consensus 99.6 7E-14 1.5E-18 92.0 11.4 140 12-161 69-221 (376)
168 TIGR03866 PQQ_ABC_repeats PQQ- 99.6 2.9E-13 6.3E-18 91.0 15.0 121 26-162 2-125 (300)
169 KOG0322|consensus 99.6 3.1E-14 6.7E-19 90.8 9.2 131 28-162 168-304 (323)
170 KOG2048|consensus 99.6 5.3E-13 1.1E-17 94.5 16.2 138 13-162 25-165 (691)
171 KOG1034|consensus 99.6 5.7E-13 1.2E-17 87.4 14.3 141 14-162 39-192 (385)
172 KOG0322|consensus 99.5 3.4E-14 7.4E-19 90.7 7.4 122 8-138 200-322 (323)
173 KOG0642|consensus 99.5 2.4E-13 5.2E-18 94.5 11.6 150 10-162 341-542 (577)
174 KOG2445|consensus 99.5 1.1E-12 2.4E-17 85.4 13.7 142 12-162 58-234 (361)
175 KOG0321|consensus 99.5 8.5E-14 1.8E-18 98.1 9.1 121 12-143 99-252 (720)
176 KOG1523|consensus 99.5 1.8E-13 3.9E-18 89.5 9.9 143 10-162 52-217 (361)
177 KOG4378|consensus 99.5 5.5E-13 1.2E-17 91.9 12.3 141 9-162 117-261 (673)
178 KOG1272|consensus 99.5 2.5E-14 5.4E-19 97.5 5.5 120 16-148 212-332 (545)
179 KOG1063|consensus 99.5 5.2E-13 1.1E-17 94.9 11.8 141 12-161 571-733 (764)
180 COG2319 FOG: WD40 repeat [Gene 99.5 5.6E-12 1.2E-16 87.5 17.0 139 9-161 151-294 (466)
181 KOG1538|consensus 99.5 1.3E-12 2.9E-17 93.2 12.4 133 15-162 14-187 (1081)
182 KOG0649|consensus 99.5 4.9E-12 1.1E-16 80.3 13.6 130 15-160 116-255 (325)
183 KOG1408|consensus 99.5 1.3E-12 2.8E-17 93.8 11.0 119 12-140 595-714 (1080)
184 KOG1963|consensus 99.5 4.1E-12 8.9E-17 92.3 13.6 117 14-141 206-324 (792)
185 KOG4328|consensus 99.4 2.8E-12 6.1E-17 87.4 11.6 141 12-161 321-474 (498)
186 KOG1188|consensus 99.4 1.4E-12 3E-17 85.9 9.7 124 26-162 41-176 (376)
187 PRK01742 tolB translocation pr 99.4 4.4E-12 9.5E-17 89.7 12.8 135 10-162 244-382 (429)
188 KOG0644|consensus 99.4 5.5E-14 1.2E-18 101.9 3.3 96 66-161 188-284 (1113)
189 KOG3881|consensus 99.4 2.4E-12 5.2E-17 86.1 10.6 131 17-160 206-340 (412)
190 KOG2110|consensus 99.4 1.3E-11 2.8E-16 82.2 13.8 112 16-140 132-249 (391)
191 KOG0650|consensus 99.4 2.5E-11 5.4E-16 85.6 15.4 141 6-161 393-576 (733)
192 KOG1310|consensus 99.4 1.4E-12 3E-17 91.0 8.8 118 11-141 48-180 (758)
193 KOG0642|consensus 99.4 2E-12 4.3E-17 90.0 9.4 119 16-143 297-430 (577)
194 KOG2106|consensus 99.4 8.3E-12 1.8E-16 86.3 12.0 138 13-161 447-606 (626)
195 PRK01742 tolB translocation pr 99.4 4.9E-12 1.1E-16 89.4 11.4 132 13-162 203-343 (429)
196 KOG4227|consensus 99.4 9.2E-12 2E-16 84.0 11.9 142 12-161 55-204 (609)
197 KOG0650|consensus 99.4 1.4E-12 3E-17 91.7 8.3 111 14-136 608-732 (733)
198 KOG0280|consensus 99.4 2.6E-11 5.6E-16 78.8 13.3 133 17-161 125-263 (339)
199 KOG2919|consensus 99.4 6.8E-12 1.5E-16 82.5 10.4 131 23-162 121-261 (406)
200 KOG2315|consensus 99.4 9.2E-12 2E-16 86.8 11.5 130 12-161 269-410 (566)
201 KOG2321|consensus 99.4 8.5E-12 1.9E-16 87.5 10.7 145 14-162 176-324 (703)
202 KOG4547|consensus 99.4 3.2E-11 6.9E-16 84.5 13.2 124 25-161 70-194 (541)
203 PRK02889 tolB translocation pr 99.4 3.8E-11 8.2E-16 84.9 13.7 138 10-162 236-381 (427)
204 PRK03629 tolB translocation pr 99.4 8.4E-11 1.8E-15 83.2 15.2 136 13-162 198-341 (429)
205 KOG0644|consensus 99.4 5E-13 1.1E-17 97.1 3.9 109 14-139 191-300 (1113)
206 PRK05137 tolB translocation pr 99.4 7.7E-11 1.7E-15 83.6 14.6 138 11-162 199-344 (435)
207 PRK11028 6-phosphogluconolacto 99.4 2.2E-10 4.7E-15 78.6 16.4 116 14-139 80-205 (330)
208 KOG2111|consensus 99.3 1.9E-10 4.1E-15 75.5 14.5 138 10-162 91-237 (346)
209 COG2319 FOG: WD40 repeat [Gene 99.3 3.8E-10 8.3E-15 78.4 17.3 142 10-162 62-209 (466)
210 KOG2111|consensus 99.3 1.2E-10 2.5E-15 76.5 13.1 74 67-140 180-257 (346)
211 PRK03629 tolB translocation pr 99.3 1.6E-10 3.4E-15 81.8 14.5 138 10-162 239-384 (429)
212 KOG0321|consensus 99.3 9.7E-12 2.1E-16 88.0 7.7 109 25-141 64-177 (720)
213 KOG1963|consensus 99.3 1E-10 2.2E-15 85.3 12.8 135 17-162 164-303 (792)
214 PRK02889 tolB translocation pr 99.3 1E-10 2.2E-15 82.8 12.3 137 12-162 194-338 (427)
215 KOG4497|consensus 99.3 3.4E-11 7.4E-16 79.6 9.0 129 18-162 13-144 (447)
216 PRK11028 6-phosphogluconolacto 99.3 5.1E-10 1.1E-14 76.7 15.0 140 15-159 176-327 (330)
217 KOG1587|consensus 99.3 2.8E-11 6.1E-16 86.7 9.1 119 10-140 395-517 (555)
218 KOG1272|consensus 99.3 1.4E-11 3E-16 84.4 7.0 132 14-161 252-389 (545)
219 PRK04922 tolB translocation pr 99.3 3.9E-10 8.5E-15 80.0 14.5 137 11-162 245-389 (433)
220 PRK04922 tolB translocation pr 99.3 2.2E-10 4.8E-15 81.2 13.3 136 13-162 203-346 (433)
221 KOG3914|consensus 99.3 7.9E-11 1.7E-15 79.2 10.1 83 65-148 148-232 (390)
222 KOG4227|consensus 99.3 1.3E-10 2.8E-15 78.6 11.1 129 2-141 94-227 (609)
223 KOG1240|consensus 99.3 5.6E-10 1.2E-14 84.5 15.5 138 17-161 1052-1248(1431)
224 KOG1310|consensus 99.3 1.5E-11 3.4E-16 86.0 7.0 97 65-161 47-157 (758)
225 KOG1538|consensus 99.3 4.7E-11 1E-15 85.5 9.0 89 70-161 14-103 (1081)
226 KOG0771|consensus 99.3 2E-11 4.4E-16 82.3 6.6 76 72-148 148-224 (398)
227 PRK05137 tolB translocation pr 99.3 4.9E-10 1.1E-14 79.6 13.9 138 10-162 242-387 (435)
228 KOG3881|consensus 99.3 3.3E-10 7.2E-15 76.1 12.1 143 16-162 151-301 (412)
229 KOG1587|consensus 99.2 4.2E-10 9.2E-15 80.8 13.2 157 4-161 282-451 (555)
230 PRK00178 tolB translocation pr 99.2 9.2E-10 2E-14 78.1 14.8 136 13-162 198-341 (430)
231 KOG2139|consensus 99.2 2.5E-10 5.5E-15 76.3 10.6 133 15-162 100-249 (445)
232 PRK01029 tolB translocation pr 99.2 1.2E-09 2.5E-14 77.4 14.4 145 9-162 226-381 (428)
233 KOG1524|consensus 99.2 4.7E-10 1E-14 78.6 11.4 124 11-162 143-267 (737)
234 PRK04792 tolB translocation pr 99.2 1.2E-09 2.7E-14 77.7 13.7 135 14-162 218-360 (448)
235 KOG2041|consensus 99.2 5E-10 1.1E-14 81.1 11.4 152 10-162 11-167 (1189)
236 KOG0974|consensus 99.2 8.9E-10 1.9E-14 81.9 12.6 125 21-161 141-268 (967)
237 PF02239 Cytochrom_D1: Cytochr 99.2 4.5E-09 9.8E-14 72.9 15.4 109 26-148 6-117 (369)
238 KOG1517|consensus 99.2 1.1E-09 2.4E-14 82.0 12.6 136 16-161 1211-1361(1387)
239 TIGR02800 propeller_TolB tol-p 99.2 3.6E-09 7.7E-14 74.8 14.2 136 12-162 232-375 (417)
240 TIGR02800 propeller_TolB tol-p 99.2 3.5E-09 7.6E-14 74.8 14.2 135 14-162 190-332 (417)
241 PRK01029 tolB translocation pr 99.1 5.3E-09 1.1E-13 74.1 14.5 133 17-161 284-424 (428)
242 KOG1354|consensus 99.1 2.3E-10 5E-15 76.1 6.5 140 4-150 155-313 (433)
243 PRK00178 tolB translocation pr 99.1 9.5E-09 2.1E-13 73.0 14.8 137 11-162 240-384 (430)
244 PF00400 WD40: WD domain, G-be 99.1 3.7E-10 8.1E-15 52.6 5.3 38 100-137 1-39 (39)
245 KOG4532|consensus 99.1 1.9E-08 4.1E-13 65.2 14.0 122 16-147 161-290 (344)
246 KOG0974|consensus 99.1 7.5E-09 1.6E-13 77.2 12.8 131 23-162 97-229 (967)
247 KOG2321|consensus 99.1 5.6E-09 1.2E-13 73.8 11.3 131 17-161 137-281 (703)
248 KOG2695|consensus 99.0 1E-09 2.2E-14 73.1 7.2 134 17-160 256-401 (425)
249 COG4946 Uncharacterized protei 99.0 5.1E-08 1.1E-12 67.9 15.5 134 14-162 360-499 (668)
250 PRK04792 tolB translocation pr 99.0 2.9E-08 6.4E-13 70.8 14.8 137 11-162 259-403 (448)
251 KOG1334|consensus 99.0 8.5E-10 1.8E-14 76.3 6.6 123 11-140 334-467 (559)
252 PF10282 Lactonase: Lactonase, 99.0 1.5E-07 3.2E-12 65.1 17.7 143 12-162 142-302 (345)
253 PF02239 Cytochrom_D1: Cytochr 99.0 1.3E-07 2.7E-12 65.8 17.1 130 18-162 41-182 (369)
254 KOG1517|consensus 99.0 1E-08 2.2E-13 77.1 11.9 145 15-161 1111-1266(1387)
255 PF00400 WD40: WD domain, G-be 99.0 2.9E-09 6.2E-14 49.6 5.4 30 67-96 10-39 (39)
256 KOG1334|consensus 98.9 4.2E-09 9.2E-14 72.9 7.2 152 7-161 136-346 (559)
257 KOG1064|consensus 98.9 2.2E-09 4.7E-14 84.3 5.9 121 14-148 2252-2407(2439)
258 PF10282 Lactonase: Lactonase, 98.9 1.3E-06 2.8E-11 60.5 19.0 146 11-159 189-345 (345)
259 KOG1064|consensus 98.9 4E-09 8.8E-14 82.8 7.1 122 15-148 2210-2375(2439)
260 PF11768 DUF3312: Protein of u 98.9 2.7E-07 5.8E-12 65.7 15.4 71 69-141 260-331 (545)
261 KOG2315|consensus 98.9 1.3E-07 2.9E-12 66.6 13.5 88 70-162 272-365 (566)
262 PRK04043 tolB translocation pr 98.9 3.9E-07 8.4E-12 64.5 15.2 132 15-162 189-329 (419)
263 PF15492 Nbas_N: Neuroblastoma 98.9 3E-07 6.5E-12 60.1 13.0 85 67-151 146-271 (282)
264 KOG4714|consensus 98.8 5.4E-09 1.2E-13 67.3 4.7 71 70-140 181-255 (319)
265 KOG2314|consensus 98.8 7.5E-08 1.6E-12 68.1 10.5 131 14-161 211-356 (698)
266 PRK04043 tolB translocation pr 98.8 5.1E-07 1.1E-11 63.9 14.7 135 11-162 230-378 (419)
267 KOG4532|consensus 98.8 4E-07 8.6E-12 59.2 11.9 91 71-161 161-260 (344)
268 COG5170 CDC55 Serine/threonine 98.8 1.6E-08 3.4E-13 66.9 5.6 133 10-149 169-320 (460)
269 KOG3914|consensus 98.8 5.8E-08 1.3E-12 65.8 8.3 78 16-106 154-231 (390)
270 KOG1354|consensus 98.8 8.6E-08 1.9E-12 64.2 8.8 127 14-141 85-246 (433)
271 COG2706 3-carboxymuconate cycl 98.8 2.1E-06 4.5E-11 57.9 15.2 139 15-162 41-201 (346)
272 KOG1409|consensus 98.8 1.2E-07 2.7E-12 63.4 8.9 78 9-98 193-270 (404)
273 PF11768 DUF3312: Protein of u 98.7 1.3E-07 2.9E-12 67.2 9.0 78 8-100 254-331 (545)
274 KOG4497|consensus 98.7 6.1E-07 1.3E-11 60.0 11.4 89 70-160 320-411 (447)
275 KOG4640|consensus 98.7 1.2E-07 2.6E-12 67.9 8.4 91 70-161 22-115 (665)
276 KOG4547|consensus 98.7 1.7E-06 3.6E-11 61.5 12.8 130 23-162 3-155 (541)
277 KOG1912|consensus 98.6 5.9E-07 1.3E-11 66.1 10.1 130 17-161 19-165 (1062)
278 COG4946 Uncharacterized protei 98.6 6.3E-06 1.4E-10 57.9 14.6 97 65-162 356-454 (668)
279 PF08450 SGL: SMP-30/Gluconola 98.6 4.5E-05 9.7E-10 50.4 17.7 133 14-160 86-233 (246)
280 PF04762 IKI3: IKI3 family; I 98.6 5.1E-06 1.1E-10 64.2 14.4 155 6-162 113-315 (928)
281 KOG1240|consensus 98.6 5.5E-06 1.2E-10 63.9 14.0 136 12-147 1097-1281(1431)
282 KOG0280|consensus 98.6 1.1E-05 2.5E-10 53.2 13.6 91 71-161 124-220 (339)
283 KOG2066|consensus 98.6 2.8E-06 6.1E-11 62.7 11.9 107 24-148 82-196 (846)
284 KOG1409|consensus 98.6 1.2E-06 2.6E-11 58.8 9.2 77 66-142 195-273 (404)
285 PF07433 DUF1513: Protein of u 98.5 1.5E-05 3.2E-10 53.6 14.2 140 13-162 4-173 (305)
286 KOG4714|consensus 98.5 3.9E-07 8.4E-12 59.0 6.5 72 16-99 182-255 (319)
287 KOG4190|consensus 98.5 4.5E-07 9.7E-12 64.6 7.3 136 15-161 737-886 (1034)
288 TIGR02658 TTQ_MADH_Hv methylam 98.5 4.3E-05 9.3E-10 52.8 16.5 78 70-148 249-339 (352)
289 COG2706 3-carboxymuconate cycl 98.5 3.1E-05 6.7E-10 52.4 15.3 120 17-140 92-222 (346)
290 KOG3617|consensus 98.5 3.5E-07 7.6E-12 68.0 6.6 107 18-139 20-131 (1416)
291 KOG2695|consensus 98.5 2.3E-07 4.9E-12 62.2 5.1 82 70-152 254-345 (425)
292 KOG0309|consensus 98.5 8.2E-07 1.8E-11 65.2 7.7 137 14-160 68-210 (1081)
293 PLN02919 haloacid dehalogenase 98.5 1.8E-05 3.9E-10 62.2 14.9 123 17-143 743-892 (1057)
294 KOG4640|consensus 98.5 1.5E-06 3.3E-11 62.5 8.1 93 12-118 19-114 (665)
295 PF04762 IKI3: IKI3 family; I 98.4 2.4E-05 5.3E-10 60.6 14.8 73 14-96 76-148 (928)
296 TIGR02658 TTQ_MADH_Hv methylam 98.4 3.6E-05 7.7E-10 53.2 13.8 99 35-148 27-145 (352)
297 KOG2314|consensus 98.4 7.7E-06 1.7E-10 58.3 10.2 118 11-139 443-573 (698)
298 PLN02919 haloacid dehalogenase 98.4 0.00011 2.4E-09 58.0 16.9 123 17-144 686-838 (1057)
299 COG5170 CDC55 Serine/threonine 98.2 8E-06 1.7E-10 54.5 7.2 126 14-140 86-253 (460)
300 smart00320 WD40 WD40 repeats. 98.2 8.4E-06 1.8E-10 36.6 4.9 37 101-137 3-40 (40)
301 KOG1645|consensus 98.2 8.3E-06 1.8E-10 56.0 6.3 76 66-142 191-269 (463)
302 KOG1275|consensus 98.2 4E-05 8.7E-10 57.8 10.1 125 21-161 183-322 (1118)
303 KOG3621|consensus 98.1 5.1E-05 1.1E-09 55.6 10.2 109 20-140 40-155 (726)
304 PF04053 Coatomer_WDAD: Coatom 98.1 0.00027 5.8E-09 50.6 13.4 123 14-162 33-155 (443)
305 COG0823 TolB Periplasmic compo 98.1 3.2E-05 6.9E-10 54.9 8.8 118 12-142 236-361 (425)
306 COG5354 Uncharacterized protei 98.1 9.3E-05 2E-09 52.4 10.5 112 11-140 272-396 (561)
307 KOG2066|consensus 98.1 0.0001 2.2E-09 54.9 10.9 113 25-161 49-170 (846)
308 KOG2079|consensus 98.1 2.6E-05 5.7E-10 59.7 8.0 97 24-132 98-198 (1206)
309 COG0823 TolB Periplasmic compo 98.1 6.5E-05 1.4E-09 53.4 9.7 132 17-162 196-336 (425)
310 COG5354 Uncharacterized protei 98.0 4.9E-05 1.1E-09 53.8 8.1 132 12-161 31-183 (561)
311 KOG0309|consensus 98.0 2.7E-05 5.8E-10 57.6 6.9 115 15-141 116-234 (1081)
312 KOG4649|consensus 98.0 0.00078 1.7E-08 44.3 12.7 113 20-148 17-132 (354)
313 smart00320 WD40 WD40 repeats. 98.0 1.9E-05 4.1E-10 35.4 4.1 28 69-96 13-40 (40)
314 PF12894 Apc4_WD40: Anaphase-p 97.9 5.3E-05 1.1E-09 36.4 5.1 33 70-103 13-45 (47)
315 PF15492 Nbas_N: Neuroblastoma 97.9 0.0019 4.2E-08 42.8 14.4 132 19-162 3-158 (282)
316 KOG1832|consensus 97.9 6.4E-06 1.4E-10 62.0 2.6 130 16-162 1104-1241(1516)
317 PF08450 SGL: SMP-30/Gluconola 97.9 0.0016 3.5E-08 43.0 13.8 104 17-127 137-243 (246)
318 KOG2041|consensus 97.9 6.3E-05 1.4E-09 55.7 7.1 93 70-162 16-126 (1189)
319 KOG3621|consensus 97.9 8.3E-05 1.8E-09 54.6 7.2 93 70-162 35-135 (726)
320 KOG1920|consensus 97.8 0.001 2.2E-08 52.0 12.7 152 9-162 105-300 (1265)
321 PF07433 DUF1513: Protein of u 97.8 0.0007 1.5E-08 45.8 10.3 93 70-162 6-109 (305)
322 KOG4190|consensus 97.8 8.9E-05 1.9E-09 53.4 6.4 123 12-147 783-914 (1034)
323 KOG1912|consensus 97.8 8.1E-05 1.7E-09 55.5 6.2 89 71-161 18-119 (1062)
324 PF14783 BBS2_Mid: Ciliary BBS 97.8 0.0017 3.6E-08 37.2 13.0 99 16-134 2-109 (111)
325 TIGR03300 assembly_YfgL outer 97.8 0.00074 1.6E-08 47.5 10.6 109 25-151 241-350 (377)
326 KOG0882|consensus 97.8 0.00027 5.8E-09 49.6 8.0 106 32-148 119-240 (558)
327 KOG4499|consensus 97.8 0.0022 4.8E-08 41.7 11.4 90 71-160 160-262 (310)
328 KOG2444|consensus 97.7 0.00019 4.1E-09 46.0 6.4 104 25-140 70-178 (238)
329 PF04053 Coatomer_WDAD: Coatom 97.7 0.00094 2E-08 47.9 10.6 79 80-162 117-207 (443)
330 PF13360 PQQ_2: PQQ-like domai 97.7 0.0012 2.6E-08 43.2 10.5 112 23-149 34-150 (238)
331 KOG1275|consensus 97.7 0.00023 4.9E-09 54.0 7.2 74 71-147 180-262 (1118)
332 TIGR03300 assembly_YfgL outer 97.7 0.0022 4.7E-08 45.2 11.6 108 24-148 64-172 (377)
333 KOG1920|consensus 97.7 0.0039 8.5E-08 49.0 13.4 68 14-95 69-136 (1265)
334 PF12894 Apc4_WD40: Anaphase-p 97.7 0.00028 6.1E-09 33.9 5.0 35 9-43 7-41 (47)
335 KOG1008|consensus 97.7 9.4E-06 2E-10 58.9 -0.2 139 12-161 101-253 (783)
336 PF08596 Lgl_C: Lethal giant l 97.6 0.0097 2.1E-07 42.3 14.4 124 15-139 3-173 (395)
337 KOG2114|consensus 97.6 0.0071 1.5E-07 46.0 14.0 129 13-151 125-256 (933)
338 KOG1645|consensus 97.6 0.00021 4.5E-09 49.4 5.8 74 13-100 193-268 (463)
339 PRK13616 lipoprotein LpqB; Pro 97.6 0.0054 1.2E-07 45.8 12.8 130 15-162 351-507 (591)
340 PRK02888 nitrous-oxide reducta 97.6 0.0063 1.4E-07 45.2 12.8 53 89-142 295-354 (635)
341 PRK02888 nitrous-oxide reducta 97.5 0.0034 7.5E-08 46.5 11.3 70 70-140 322-405 (635)
342 COG3386 Gluconolactonase [Carb 97.5 0.01 2.3E-07 40.6 13.0 90 70-160 164-263 (307)
343 PF08553 VID27: VID27 cytoplas 97.5 0.0039 8.4E-08 47.7 11.7 67 70-138 579-646 (794)
344 KOG2079|consensus 97.5 0.00029 6.4E-09 54.3 5.8 78 80-157 99-178 (1206)
345 KOG3617|consensus 97.5 0.00096 2.1E-08 50.7 8.0 73 13-98 59-131 (1416)
346 KOG0882|consensus 97.4 0.0041 8.9E-08 44.0 10.0 134 12-147 143-313 (558)
347 KOG2114|consensus 97.4 0.019 4.2E-07 43.9 13.9 133 26-161 78-224 (933)
348 KOG3630|consensus 97.4 0.002 4.4E-08 50.3 8.8 143 13-160 100-252 (1405)
349 PF08553 VID27: VID27 cytoplas 97.2 0.0078 1.7E-07 46.1 10.3 112 38-162 505-629 (794)
350 PF13360 PQQ_2: PQQ-like domai 97.2 0.028 6E-07 36.8 14.6 114 24-146 121-237 (238)
351 KOG1832|consensus 97.2 0.00068 1.5E-08 51.8 4.5 74 67-140 1100-1176(1516)
352 COG3391 Uncharacterized conser 97.2 0.045 9.7E-07 38.8 14.8 113 17-144 77-195 (381)
353 PF00930 DPPIV_N: Dipeptidyl p 97.1 0.0045 9.7E-08 43.3 8.1 55 89-145 22-77 (353)
354 PF14655 RAB3GAP2_N: Rab3 GTPa 97.1 0.014 2.9E-07 41.7 10.3 80 70-149 309-408 (415)
355 PF15390 DUF4613: Domain of un 97.1 0.062 1.3E-06 39.7 13.4 123 14-141 57-188 (671)
356 PF08596 Lgl_C: Lethal giant l 97.1 0.028 6.1E-07 40.0 11.6 90 70-160 3-144 (395)
357 PF06977 SdiA-regulated: SdiA- 97.0 0.048 1E-06 36.3 16.1 140 16-162 67-232 (248)
358 PF14783 BBS2_Mid: Ciliary BBS 96.9 0.026 5.7E-07 32.4 12.0 62 73-138 7-70 (111)
359 PF06433 Me-amine-dh_H: Methyl 96.9 0.062 1.3E-06 37.2 11.4 64 34-109 266-331 (342)
360 COG3490 Uncharacterized protei 96.9 0.065 1.4E-06 36.2 11.8 56 74-129 119-181 (366)
361 PF10313 DUF2415: Uncharacteri 96.9 0.0067 1.4E-07 28.4 4.8 30 70-99 2-34 (43)
362 KOG4649|consensus 96.9 0.067 1.4E-06 35.7 10.8 82 24-119 62-145 (354)
363 COG3490 Uncharacterized protei 96.8 0.035 7.5E-07 37.4 9.3 93 70-162 69-172 (366)
364 PF06433 Me-amine-dh_H: Methyl 96.8 0.092 2E-06 36.4 12.7 79 71-150 240-331 (342)
365 PRK11138 outer membrane biogen 96.8 0.053 1.1E-06 38.6 11.0 68 80-149 294-363 (394)
366 PRK13616 lipoprotein LpqB; Pro 96.8 0.011 2.4E-07 44.2 7.8 87 70-162 351-458 (591)
367 COG3391 Uncharacterized conser 96.8 0.11 2.3E-06 37.0 15.1 117 16-146 118-246 (381)
368 COG3386 Gluconolactonase [Carb 96.7 0.059 1.3E-06 37.1 10.2 101 17-127 166-273 (307)
369 PF10313 DUF2415: Uncharacteri 96.7 0.013 2.9E-07 27.4 5.0 30 112-141 2-35 (43)
370 PF00780 CNH: CNH domain; Int 96.7 0.096 2.1E-06 35.2 12.6 121 23-161 5-148 (275)
371 PF12234 Rav1p_C: RAVE protein 96.7 0.094 2E-06 39.5 11.7 106 19-138 35-155 (631)
372 PRK11138 outer membrane biogen 96.6 0.071 1.5E-06 37.9 10.9 67 80-148 120-187 (394)
373 PF10168 Nup88: Nuclear pore c 96.6 0.11 2.3E-06 40.1 11.9 91 10-100 81-181 (717)
374 KOG4499|consensus 96.5 0.12 2.6E-06 34.0 10.2 105 18-127 162-272 (310)
375 COG3204 Uncharacterized protei 96.5 0.11 2.3E-06 35.3 9.8 119 9-139 81-210 (316)
376 PF14870 PSII_BNR: Photosynthe 96.4 0.17 3.7E-06 34.7 14.2 137 8-160 139-284 (302)
377 KOG1008|consensus 96.4 0.0017 3.7E-08 47.8 1.4 108 17-139 158-275 (783)
378 KOG2395|consensus 96.3 0.06 1.3E-06 39.3 8.8 66 71-138 433-499 (644)
379 TIGR02276 beta_rpt_yvtn 40-res 96.3 0.034 7.4E-07 25.6 6.0 41 119-160 1-42 (42)
380 KOG2395|consensus 96.3 0.072 1.6E-06 38.9 8.9 112 37-161 356-481 (644)
381 KOG2377|consensus 96.2 0.26 5.7E-06 35.7 11.3 90 70-161 68-163 (657)
382 PF14583 Pectate_lyase22: Olig 96.2 0.084 1.8E-06 37.3 8.6 90 71-160 38-131 (386)
383 PF10647 Gmad1: Lipoprotein Lp 96.2 0.21 4.6E-06 33.4 13.5 134 15-162 25-176 (253)
384 KOG2377|consensus 96.2 0.11 2.3E-06 37.5 9.1 121 10-141 63-187 (657)
385 TIGR02604 Piru_Ver_Nterm putat 96.1 0.3 6.5E-06 34.6 13.7 102 14-128 14-142 (367)
386 PF07569 Hira: TUP1-like enhan 96.0 0.097 2.1E-06 34.2 7.9 65 76-141 18-97 (219)
387 PF14655 RAB3GAP2_N: Rab3 GTPa 95.9 0.23 4.9E-06 35.7 10.1 92 13-108 307-408 (415)
388 PF02897 Peptidase_S9_N: Proly 95.8 0.33 7.1E-06 34.8 10.7 92 70-162 125-237 (414)
389 PF06977 SdiA-regulated: SdiA- 95.8 0.33 7.1E-06 32.4 12.8 119 8-139 16-147 (248)
390 PF11715 Nup160: Nucleoporin N 95.7 0.12 2.7E-06 38.5 8.6 70 78-147 156-256 (547)
391 PF03178 CPSF_A: CPSF A subuni 95.7 0.44 9.5E-06 33.0 14.3 115 9-139 84-202 (321)
392 KOG2247|consensus 95.6 0.0013 2.8E-08 47.0 -1.7 128 18-161 39-169 (615)
393 cd00216 PQQ_DH Dehydrogenases 95.6 0.43 9.4E-06 35.2 10.8 62 88-149 364-434 (488)
394 KOG1916|consensus 95.4 0.03 6.5E-07 43.4 4.4 134 10-152 129-283 (1283)
395 PF02897 Peptidase_S9_N: Proly 95.3 0.73 1.6E-05 33.1 18.4 113 17-141 127-262 (414)
396 PF00930 DPPIV_N: Dipeptidyl p 95.2 0.69 1.5E-05 32.5 13.5 141 13-162 183-338 (353)
397 PF04841 Vps16_N: Vps16, N-ter 95.1 0.84 1.8E-05 33.0 10.9 32 14-45 217-248 (410)
398 PF14583 Pectate_lyase22: Olig 95.1 0.8 1.7E-05 32.6 12.7 130 20-161 42-197 (386)
399 PF05694 SBP56: 56kDa selenium 95.1 0.87 1.9E-05 33.0 12.8 89 73-161 134-254 (461)
400 PF11715 Nup160: Nucleoporin N 95.0 0.71 1.5E-05 34.5 10.6 37 70-106 216-256 (547)
401 cd00216 PQQ_DH Dehydrogenases 94.5 1.2 2.6E-05 32.9 10.5 68 81-148 111-192 (488)
402 PF10168 Nup88: Nuclear pore c 94.5 1.8 3.8E-05 33.8 14.6 72 70-141 86-181 (717)
403 PHA02713 hypothetical protein; 94.5 0.34 7.3E-06 36.4 7.8 73 79-152 463-546 (557)
404 TIGR03074 PQQ_membr_DH membran 94.5 1.9 4E-05 33.9 12.7 68 80-148 260-353 (764)
405 PF10647 Gmad1: Lipoprotein Lp 94.4 0.96 2.1E-05 30.3 9.5 90 70-162 25-122 (253)
406 PF07569 Hira: TUP1-like enhan 94.3 0.88 1.9E-05 29.8 8.6 85 18-104 15-101 (219)
407 COG5167 VID27 Protein involved 94.3 1.6 3.4E-05 32.5 10.1 98 28-139 481-591 (776)
408 KOG1916|consensus 94.3 0.13 2.8E-06 40.2 5.1 131 9-144 176-328 (1283)
409 KOG2444|consensus 94.0 0.56 1.2E-05 30.7 6.9 72 80-151 70-144 (238)
410 PF03178 CPSF_A: CPSF A subuni 93.9 1.5 3.2E-05 30.4 16.7 88 69-160 89-181 (321)
411 COG3204 Uncharacterized protei 93.7 1.5 3.2E-05 30.1 8.7 72 70-141 87-160 (316)
412 PF07995 GSDH: Glucose / Sorbo 93.7 1.7 3.6E-05 30.5 10.6 106 16-129 4-133 (331)
413 PF05096 Glu_cyclase_2: Glutam 93.6 1.5 3.2E-05 29.6 15.3 118 17-147 48-165 (264)
414 TIGR03075 PQQ_enz_alc_DH PQQ-d 93.6 1.2 2.6E-05 33.4 9.0 60 90-149 441-500 (527)
415 PF14870 PSII_BNR: Photosynthe 93.5 1.7 3.7E-05 30.0 17.2 67 70-137 146-213 (302)
416 TIGR03075 PQQ_enz_alc_DH PQQ-d 93.4 2.6 5.6E-05 31.6 11.4 67 81-148 121-198 (527)
417 PF08728 CRT10: CRT10; InterP 93.4 1 2.3E-05 34.7 8.4 123 16-138 103-245 (717)
418 PF05694 SBP56: 56kDa selenium 93.3 2.1 4.5E-05 31.1 9.3 31 111-141 312-344 (461)
419 KOG1897|consensus 93.2 3.7 8.1E-05 32.9 12.3 84 70-157 776-874 (1096)
420 smart00564 PQQ beta-propeller 92.9 0.37 7.9E-06 20.7 4.0 25 123-147 8-32 (33)
421 PF04841 Vps16_N: Vps16, N-ter 92.7 2.8 6.1E-05 30.3 13.5 82 76-161 186-269 (410)
422 PF12657 TFIIIC_delta: Transcr 92.7 1.6 3.4E-05 27.4 8.2 30 70-99 87-122 (173)
423 PF14781 BBS2_N: Ciliary BBSom 92.6 1.3 2.9E-05 26.5 9.5 83 74-159 4-100 (136)
424 PF15390 DUF4613: Domain of un 92.6 0.8 1.7E-05 34.3 6.7 69 19-99 118-187 (671)
425 PF07676 PD40: WD40-like Beta 92.5 0.51 1.1E-05 21.2 4.5 27 110-136 8-38 (39)
426 PF12234 Rav1p_C: RAVE protein 92.5 3.9 8.4E-05 31.4 13.9 90 73-162 34-139 (631)
427 PRK10115 protease 2; Provision 92.1 3.6 7.8E-05 32.0 10.0 69 70-141 128-209 (686)
428 KOG4460|consensus 92.0 4.1 8.9E-05 30.5 9.5 92 10-101 100-201 (741)
429 TIGR02276 beta_rpt_yvtn 40-res 91.8 0.66 1.4E-05 21.0 4.7 31 78-108 1-32 (42)
430 PF01011 PQQ: PQQ enzyme repea 91.5 0.7 1.5E-05 20.8 4.3 27 123-149 2-28 (38)
431 PHA02713 hypothetical protein; 91.5 3.3 7.1E-05 31.3 9.1 106 23-140 350-489 (557)
432 PHA03098 kelch-like protein; P 91.1 5.2 0.00011 30.0 10.1 63 79-142 342-417 (534)
433 PRK10115 protease 2; Provision 90.9 6.3 0.00014 30.7 16.3 110 16-138 129-254 (686)
434 PF12657 TFIIIC_delta: Transcr 90.9 2.7 5.8E-05 26.4 8.2 28 112-139 87-121 (173)
435 COG5167 VID27 Protein involved 90.6 1.4 2.9E-05 32.8 6.1 59 80-139 573-632 (776)
436 TIGR02604 Piru_Ver_Nterm putat 90.6 4.7 0.0001 28.6 9.7 67 70-138 15-98 (367)
437 PF14781 BBS2_N: Ciliary BBSom 90.4 2.5 5.5E-05 25.3 12.1 113 21-147 6-133 (136)
438 PF10214 Rrn6: RNA polymerase 89.8 8.7 0.00019 30.4 13.9 73 70-143 147-236 (765)
439 TIGR03032 conserved hypothetic 89.7 5.3 0.00011 27.9 13.2 80 79-161 212-314 (335)
440 KOG4460|consensus 89.6 5.4 0.00012 29.9 8.4 75 70-144 105-203 (741)
441 KOG3630|consensus 89.6 0.98 2.1E-05 36.5 5.0 97 17-126 159-260 (1405)
442 PF14761 HPS3_N: Hermansky-Pud 89.5 2.7 5.8E-05 27.4 6.2 50 26-87 29-78 (215)
443 KOG4441|consensus 89.0 8.5 0.00018 29.4 10.4 107 24-142 332-455 (571)
444 PF00780 CNH: CNH domain; Int 89.0 5.2 0.00011 26.9 13.8 63 24-99 103-166 (275)
445 PF01436 NHL: NHL repeat; Int 88.9 1 2.3E-05 18.7 4.0 25 71-95 4-28 (28)
446 PHA03098 kelch-like protein; P 88.5 8.7 0.00019 28.8 10.2 64 79-143 437-515 (534)
447 COG4590 ABC-type uncharacteriz 88.5 1.7 3.7E-05 31.8 5.2 119 14-142 221-349 (733)
448 KOG4441|consensus 88.0 10 0.00022 29.0 10.7 109 22-142 425-549 (571)
449 PRK13684 Ycf48-like protein; P 87.7 7.7 0.00017 27.3 11.6 115 10-137 211-329 (334)
450 PF12768 Rax2: Cortical protei 87.4 7.3 0.00016 26.7 8.0 71 88-159 14-96 (281)
451 PHA02790 Kelch-like protein; P 87.3 10 0.00022 28.2 9.2 105 23-142 317-426 (480)
452 TIGR02171 Fb_sc_TIGR02171 Fibr 87.2 9 0.00019 30.7 8.7 30 70-99 351-386 (912)
453 PF14761 HPS3_N: Hermansky-Pud 87.2 4.4 9.6E-05 26.5 6.1 48 80-129 29-79 (215)
454 COG5290 IkappaB kinase complex 87.1 1.6 3.4E-05 34.2 4.6 102 10-122 243-349 (1243)
455 COG4590 ABC-type uncharacteriz 87.0 10 0.00023 28.0 8.5 110 24-142 279-389 (733)
456 TIGR03606 non_repeat_PQQ dehyd 86.9 11 0.00023 28.0 11.8 60 15-80 31-90 (454)
457 KOG3616|consensus 86.5 3 6.5E-05 32.7 5.8 65 70-137 16-81 (1636)
458 PF14269 Arylsulfotran_2: Aryl 86.5 8.7 0.00019 26.6 12.8 76 14-97 144-219 (299)
459 PF14269 Arylsulfotran_2: Aryl 86.0 7.8 0.00017 26.8 7.3 69 70-138 145-219 (299)
460 PF10433 MMS1_N: Mono-function 85.8 10 0.00022 28.3 8.3 73 27-99 2-74 (504)
461 PRK13684 Ycf48-like protein; P 85.6 10 0.00022 26.7 14.2 112 8-134 167-283 (334)
462 PHA02790 Kelch-like protein; P 83.8 16 0.00034 27.2 9.2 60 79-142 407-473 (480)
463 TIGR03118 PEPCTERM_chp_1 conse 83.4 13 0.00028 26.0 7.7 68 71-138 25-117 (336)
464 PF08728 CRT10: CRT10; InterP 83.1 12 0.00025 29.4 7.6 73 15-97 165-245 (717)
465 PF13449 Phytase-like: Esteras 83.0 14 0.0003 25.9 16.2 114 14-128 20-165 (326)
466 PLN00033 photosystem II stabil 83.0 16 0.00034 26.6 14.9 88 70-161 282-380 (398)
467 PF13570 PQQ_3: PQQ-like domai 82.6 3.4 7.3E-05 18.6 3.4 21 120-140 20-40 (40)
468 PF14157 YmzC: YmzC-like prote 82.2 5.1 0.00011 20.4 4.0 28 24-51 28-55 (63)
469 PF07995 GSDH: Glucose / Sorbo 81.9 8 0.00017 27.1 6.1 24 70-93 307-330 (331)
470 TIGR03074 PQQ_membr_DH membran 81.8 23 0.0005 28.2 8.9 68 80-147 194-286 (764)
471 KOG3616|consensus 80.4 5.4 0.00012 31.4 5.1 32 15-46 16-47 (1636)
472 PF01731 Arylesterase: Arylest 80.2 7.8 0.00017 21.3 6.1 29 111-139 54-84 (86)
473 TIGR03606 non_repeat_PQQ dehyd 79.4 21 0.00046 26.5 7.6 52 111-162 30-89 (454)
474 TIGR03548 mutarot_permut cycli 79.0 19 0.00041 25.0 9.9 69 24-102 123-198 (323)
475 PF10214 Rrn6: RNA polymerase 76.9 36 0.00078 27.2 12.9 122 17-140 149-277 (765)
476 PF03088 Str_synth: Strictosid 74.9 12 0.00026 20.7 6.7 47 35-93 35-82 (89)
477 PF12341 DUF3639: Protein of u 74.6 5.5 0.00012 16.6 3.5 25 70-96 3-27 (27)
478 KOG2247|consensus 74.0 0.84 1.8E-05 33.5 -0.4 96 14-122 75-172 (615)
479 PF12768 Rax2: Cortical protei 72.6 28 0.00062 24.0 12.0 72 70-141 38-125 (281)
480 PLN00033 photosystem II stabil 72.6 34 0.00075 24.9 12.5 118 8-136 275-396 (398)
481 KOG1900|consensus 72.5 42 0.00091 28.4 8.1 85 14-99 179-273 (1311)
482 TIGR02171 Fb_sc_TIGR02171 Fibr 72.2 45 0.00097 27.2 8.0 53 89-141 328-387 (912)
483 PF11635 Med16: Mediator compl 71.8 28 0.00061 27.7 7.1 78 12-93 258-345 (753)
484 PF14779 BBS1: Ciliary BBSome 71.3 29 0.00063 23.6 6.2 57 26-95 196-255 (257)
485 COG1520 FOG: WD40-like repeat 71.1 35 0.00075 24.3 11.0 67 79-147 111-179 (370)
486 PF12275 DUF3616: Protein of u 71.0 27 0.00058 24.7 6.2 33 14-46 232-267 (330)
487 KOG1897|consensus 68.4 67 0.0014 26.5 13.8 122 8-138 525-658 (1096)
488 TIGR03054 photo_alph_chp1 puta 68.3 24 0.00052 21.4 5.7 64 82-145 43-119 (135)
489 COG1520 FOG: WD40-like repeat 68.0 41 0.00089 24.0 7.5 68 82-150 70-140 (370)
490 KOG4659|consensus 67.8 40 0.00086 28.9 7.1 25 66-90 659-683 (1899)
491 COG5290 IkappaB kinase complex 66.8 31 0.00066 27.8 6.1 69 72-142 250-327 (1243)
492 PF14727 PHTB1_N: PTHB1 N-term 65.2 53 0.0011 24.2 13.7 109 25-142 37-166 (418)
493 PF13964 Kelch_6: Kelch motif 65.1 14 0.0003 17.4 3.0 29 22-50 9-41 (50)
494 COG4880 Secreted protein conta 65.0 49 0.0011 24.5 6.5 72 69-140 428-504 (603)
495 PF10411 DsbC_N: Disulfide bon 64.8 11 0.00023 18.8 2.6 11 117-127 38-48 (57)
496 PF14779 BBS1: Ciliary BBSome 64.4 42 0.00092 22.8 6.7 69 66-135 174-254 (257)
497 PF03088 Str_synth: Strictosid 64.3 23 0.00049 19.7 8.4 41 86-127 33-74 (89)
498 TIGR03118 PEPCTERM_chp_1 conse 64.0 48 0.001 23.3 11.6 119 17-139 26-170 (336)
499 KOG3611|consensus 63.9 75 0.0016 25.5 10.2 74 13-94 407-489 (737)
500 PF07250 Glyoxal_oxid_N: Glyox 63.6 43 0.00093 22.6 10.2 71 77-149 126-207 (243)
No 1
>KOG0271|consensus
Probab=99.97 E-value=1e-29 Score=167.34 Aligned_cols=145 Identities=20% Similarity=0.259 Sum_probs=125.7
Q ss_pred cceeeeccccc---cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC
Q psy1859 4 IMQRRESSLKF---QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 4 ~~~~~~~~~~~---~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
|+.++.+.+.+ .+-|++|+|+++.|++|+.|.++++|+.+. ..+.++.++|.. =|.+++|+|||
T Consensus 103 pvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~T----eTp~~t~KgH~~---------WVlcvawsPDg 169 (480)
T KOG0271|consen 103 PVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDT----ETPLFTCKGHKN---------WVLCVAWSPDG 169 (480)
T ss_pred ccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCC----CCcceeecCCcc---------EEEEEEECCCc
Confidence 34445555444 567888999999999999999999976665 456777778766 69999999999
Q ss_pred CEEEEecCCCeEEEEeCCCccc-eeeeeecccceeEE-EcC-----CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCc
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKR-LCQFHRYDTGITSL-FHQ-----EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTG 153 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~-~~~~~~~~~~v~~~-~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 153 (162)
+.|++|+.||.|++||.+++++ ...+.+|..+|+++ |.| ..++|++++.||.++|||+..++++..+.+|..+
T Consensus 170 k~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~ 249 (480)
T KOG0271|consen 170 KKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTAS 249 (480)
T ss_pred chhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccc
Confidence 9999999999999999999866 46788999999999 887 6779999999999999999999999999999999
Q ss_pred eeEEEecC
Q psy1859 154 ITSLCFSY 161 (162)
Q Consensus 154 v~~v~~~p 161 (162)
|+|++|-.
T Consensus 250 VTCvrwGG 257 (480)
T KOG0271|consen 250 VTCVRWGG 257 (480)
T ss_pred eEEEEEcC
Confidence 99999963
No 2
>KOG0272|consensus
Probab=99.97 E-value=1.2e-30 Score=172.98 Aligned_cols=136 Identities=20% Similarity=0.211 Sum_probs=123.4
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+..++|+|+|++|++++.|.+-++||... ........+|.. .|.+++|+|+|.++++|+.|..-+
T Consensus 262 ~RVs~VafHPsG~~L~TasfD~tWRlWD~~t----k~ElL~QEGHs~---------~v~~iaf~~DGSL~~tGGlD~~~R 328 (459)
T KOG0272|consen 262 ARVSRVAFHPSGKFLGTASFDSTWRLWDLET----KSELLLQEGHSK---------GVFSIAFQPDGSLAATGGLDSLGR 328 (459)
T ss_pred hhheeeeecCCCceeeecccccchhhccccc----chhhHhhccccc---------ccceeEecCCCceeeccCccchhh
Confidence 5567899999999999999999999966554 334444466554 899999999999999999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|||+++++++..+.+|..+|..+ |+|+|..++||+.|++++|||++....+.++.+|.+-|+.|+|+|+
T Consensus 329 vWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~ 398 (459)
T KOG0272|consen 329 VWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQ 398 (459)
T ss_pred eeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEeccc
Confidence 99999999999999999999999 9999999999999999999999998899999999999999999984
No 3
>KOG0263|consensus
Probab=99.97 E-value=2e-29 Score=177.62 Aligned_cols=152 Identities=26% Similarity=0.271 Sum_probs=132.8
Q ss_pred eeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc------------------------
Q psy1859 7 RRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE------------------------ 62 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~------------------------ 62 (162)
+....+.++|...+|+|+.++|++++.|+++++|..+... ....+++|....
T Consensus 445 ~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s----~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLW 520 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWS----CLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLW 520 (707)
T ss_pred EEeecCCCceeeeeecccccceeeccCCcceeeeecccce----eEEEecCCCcceeeEEecCCceEEEecCCCceeeee
Confidence 3456678999999999999999999999999998877644 222223333211
Q ss_pred ---------CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCe
Q psy1859 63 ---------DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGY 132 (162)
Q Consensus 63 ---------~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~ 132 (162)
...+|...|.|++|||+..++++|+.|.++++||+.+|..++.|.+|.++|+++ |||+|++|++|+.|+.
T Consensus 521 s~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~ 600 (707)
T KOG0263|consen 521 STDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGL 600 (707)
T ss_pred ecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCc
Confidence 335677789999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred EEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 133 VNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 133 i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|++||+.+++.+..+.+|++.|+++.|+.|
T Consensus 601 I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~d 630 (707)
T KOG0263|consen 601 IKIWDLANGSLVKQLKGHTGTIYSLSFSRD 630 (707)
T ss_pred EEEEEcCCCcchhhhhcccCceeEEEEecC
Confidence 999999999999999999999999999976
No 4
>KOG0272|consensus
Probab=99.96 E-value=4.4e-28 Score=160.96 Aligned_cols=139 Identities=18% Similarity=0.177 Sum_probs=126.8
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+...+.+++|++||..+++|+.|..-+|||.. + ...+..+.+|.. +|.+++|+|+|..+++|+.|+
T Consensus 301 GHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlR--t--gr~im~L~gH~k---------~I~~V~fsPNGy~lATgs~Dn 367 (459)
T KOG0272|consen 301 GHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLR--T--GRCIMFLAGHIK---------EILSVAFSPNGYHLATGSSDN 367 (459)
T ss_pred ccccccceeEecCCCceeeccCccchhheeecc--c--CcEEEEeccccc---------ceeeEeECCCceEEeecCCCC
Confidence 344567889999999999999999999995544 4 567777777765 799999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+++|||++..+.+..+.+|..-|+.+ |+| .|.+|+|++.|++++||..++..+++.+.+|.+.|.++..+||
T Consensus 368 t~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d 441 (459)
T KOG0272|consen 368 TCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPD 441 (459)
T ss_pred cEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccC
Confidence 99999999999999999999999999 999 8889999999999999999999999999999999999999986
No 5
>KOG0271|consensus
Probab=99.95 E-value=4.1e-27 Score=155.20 Aligned_cols=98 Identities=21% Similarity=0.317 Sum_probs=95.1
Q ss_pred ccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee
Q psy1859 65 IEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR 143 (162)
Q Consensus 65 ~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~ 143 (162)
.+|..-|..+.|||+++++++++.|..|++||.++|+.+..+++|-..|+.+ |+.|.++|++|+.|.++++||+++++.
T Consensus 364 tgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl 443 (480)
T KOG0271|consen 364 TGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKL 443 (480)
T ss_pred hchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeee
Confidence 4688899999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred eeeeccCCCceeEEEecCC
Q psy1859 144 LCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 144 ~~~~~~~~~~v~~v~~~pd 162 (162)
...+.+|.+.|.++.|+||
T Consensus 444 ~~DLpGh~DEVf~vDwspD 462 (480)
T KOG0271|consen 444 KQDLPGHADEVFAVDWSPD 462 (480)
T ss_pred cccCCCCCceEEEEEecCC
Confidence 9999999999999999997
No 6
>KOG0284|consensus
Probab=99.95 E-value=1.9e-28 Score=162.27 Aligned_cols=139 Identities=19% Similarity=0.304 Sum_probs=124.7
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
......|++++|+|+...|+++++||+|+||++...+ . ...+.+|.- .|.+++|+|...++++++.|
T Consensus 177 ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k--e--e~vL~GHgw---------dVksvdWHP~kgLiasgskD 243 (464)
T KOG0284|consen 177 AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK--E--ERVLRGHGW---------DVKSVDWHPTKGLIASGSKD 243 (464)
T ss_pred HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc--h--hheeccCCC---------CcceeccCCccceeEEccCC
Confidence 3444778999999999999999999999998776543 2 223355544 69999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
..|++||.++++++.++..|+..|..+ |+|++.+|++++.|..++++|+++.+.+.++++|+..|+++.|+|
T Consensus 244 nlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP 316 (464)
T KOG0284|consen 244 NLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHP 316 (464)
T ss_pred ceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeecccc
Confidence 999999999999999999999999999 999999999999999999999998888999999999999999998
No 7
>KOG0266|consensus
Probab=99.95 E-value=2e-26 Score=162.39 Aligned_cols=141 Identities=21% Similarity=0.289 Sum_probs=123.9
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...|..++|+|+++++++++.|++++||+.. .. ......+++|.. .|++++|+|+++++++|+.|
T Consensus 200 ~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~-~~--~~~~~~l~gH~~---------~v~~~~f~p~g~~i~Sgs~D 267 (456)
T KOG0266|consen 200 SGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLK-DD--GRNLKTLKGHST---------YVTSVAFSPDGNLLVSGSDD 267 (456)
T ss_pred cccccceeeeEECCCCcEEEEecCCceEEEeecc-CC--CeEEEEecCCCC---------ceEEEEecCCCCEEEEecCC
Confidence 4455677899999999999999999999997662 22 356667777766 79999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce--eeeeeccCCCc--eeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK--RLCQFHRYDTG--ITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~--v~~v~~~pd 162 (162)
+.|++||++++++...+..|...++.+ |++++.++++++.|+.|++||+.++. ++..+..+... +++++|+|+
T Consensus 268 ~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~ 345 (456)
T KOG0266|consen 268 GTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPN 345 (456)
T ss_pred CcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCC
Confidence 999999999999999999999999999 99999999999999999999999998 56667666555 999999986
No 8
>KOG0279|consensus
Probab=99.95 E-value=3.2e-26 Score=145.29 Aligned_cols=135 Identities=14% Similarity=0.178 Sum_probs=115.4
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
.+..+..+++|+++++++.|+.+++||... .+....|.+|.. .|.+++|+|+.+++++|+.|.+|++
T Consensus 65 ~v~dv~~s~dg~~alS~swD~~lrlWDl~~----g~~t~~f~GH~~---------dVlsva~s~dn~qivSGSrDkTikl 131 (315)
T KOG0279|consen 65 FVSDVVLSSDGNFALSASWDGTLRLWDLAT----GESTRRFVGHTK---------DVLSVAFSTDNRQIVSGSRDKTIKL 131 (315)
T ss_pred EecceEEccCCceEEeccccceEEEEEecC----CcEEEEEEecCC---------ceEEEEecCCCceeecCCCcceeee
Confidence 456688999999999999999999966554 345556677766 6999999999999999999999999
Q ss_pred EeCCCccceeeeeec-ccceeEE-EcCC--CCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 95 WDGFNKKRLCQFHRY-DTGITSL-FHQE--YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 95 wd~~~~~~~~~~~~~-~~~v~~~-~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+............. ...|.++ |+|+ ..+++.++.|+++++||+++.+....+.+|.+.++.+++|||
T Consensus 132 wnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpD 203 (315)
T KOG0279|consen 132 WNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPD 203 (315)
T ss_pred eeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCC
Confidence 999755443333333 7889999 9997 679999999999999999999999999999999999999998
No 9
>KOG0284|consensus
Probab=99.94 E-value=3.2e-27 Score=156.50 Aligned_cols=140 Identities=18% Similarity=0.245 Sum_probs=123.5
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...|+++.|++++.++++|+.+|.|+.|+-+.+. +..+..| |...|++++|+|....|++++.|
T Consensus 135 QaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn-----Vk~~~ah--------h~eaIRdlafSpnDskF~t~SdD 201 (464)
T KOG0284|consen 135 QAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN-----VKIIQAH--------HAEAIRDLAFSPNDSKFLTCSDD 201 (464)
T ss_pred hhhcccceeEEEccCCCEEEEcCCCceEEecccchhh-----hHHhhHh--------hhhhhheeccCCCCceeEEecCC
Confidence 3456778999999999999999999999996544332 2233334 22479999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|.|+|||....+.-..+.+|.-.+.++ |+|...++++++.|+.|++||.+++.++.++..|+..|..+.|+|+
T Consensus 202 g~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n 275 (464)
T KOG0284|consen 202 GTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPN 275 (464)
T ss_pred CeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCC
Confidence 999999999998888899999999999 9999999999999999999999999999999999999999999985
No 10
>KOG0266|consensus
Probab=99.94 E-value=1.6e-25 Score=157.93 Aligned_cols=140 Identities=22% Similarity=0.339 Sum_probs=121.9
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
....+.++.|+++|+.+++++.++.+++|...... ......+.+ |...|.+++|+|+++++++++.|++
T Consensus 158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~--~~~~~~l~~---------h~~~v~~~~fs~d~~~l~s~s~D~t 226 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIK--SNLLRELSG---------HTRGVSDVAFSPDGSYLLSGSDDKT 226 (456)
T ss_pred ccCceEEEEEcCCCCeEEEccCCCcEEEeeccccc--chhhccccc---------cccceeeeEECCCCcEEEEecCCce
Confidence 35667889999999999999999999997764322 122333333 4448999999999999999999999
Q ss_pred EEEEeC-CCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 92 VNIWDG-FNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~-~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+++||+ ..+..++++.+|...++++ |+|+++++++|+.|++|+|||+++++++..+.+|.+.|++++|++|
T Consensus 227 iriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d 299 (456)
T KOG0266|consen 227 LRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPD 299 (456)
T ss_pred EEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCC
Confidence 999999 4458889999999999999 9999999999999999999999999999999999999999999986
No 11
>KOG0279|consensus
Probab=99.94 E-value=2e-25 Score=141.67 Aligned_cols=139 Identities=18% Similarity=0.195 Sum_probs=117.8
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEEecC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFATGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~ 88 (162)
.+..-+.++++++|.+.+++|+.|.++++|+.- ....++..... +.+=|.++.|+|. ...|++++.
T Consensus 103 GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-----g~ck~t~~~~~-------~~~WVscvrfsP~~~~p~Ivs~s~ 170 (315)
T KOG0279|consen 103 GHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-----GVCKYTIHEDS-------HREWVSCVRFSPNESNPIIVSASW 170 (315)
T ss_pred ecCCceEEEEecCCCceeecCCCcceeeeeeec-----ccEEEEEecCC-------CcCcEEEEEEcCCCCCcEEEEccC
Confidence 344557889999999999999999999996543 23333333222 1226999999998 589999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+.|++||+++.+....+.+|.+.++.+ +||||.++++|+.||.+.+||++.++.+..+. |...|.+++|+|+
T Consensus 171 DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspn 244 (315)
T KOG0279|consen 171 DKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPN 244 (315)
T ss_pred CceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCC
Confidence 9999999999998888999999999999 99999999999999999999999999987775 7789999999995
No 12
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=6.2e-25 Score=155.17 Aligned_cols=143 Identities=19% Similarity=0.164 Sum_probs=117.4
Q ss_pred ccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcc---cceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEE
Q psy1859 10 SSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPE---MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFA 84 (162)
Q Consensus 10 ~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~ 84 (162)
..+.+.|.+++|+| ++++|++|+.|++|++|++..... ....+..+.+| ...|.+++|+|++ ++|+
T Consensus 72 ~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH---------~~~V~~l~f~P~~~~iLa 142 (493)
T PTZ00421 72 LGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGH---------TKKVGIVSFHPSAMNVLA 142 (493)
T ss_pred eCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCC---------CCcEEEEEeCcCCCCEEE
Confidence 34567789999999 788999999999999987754320 01223344444 4479999999986 7999
Q ss_pred EecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCce-eEEEecC
Q psy1859 85 TGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGI-TSLCFSY 161 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-~~v~~~p 161 (162)
+++.|+.|++||+++++.+..+..|...+.++ |+|+|.+|++++.|+.|++||+++++.+..+..|.+.+ ..+.|.|
T Consensus 143 Sgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~ 221 (493)
T PTZ00421 143 SAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAK 221 (493)
T ss_pred EEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcC
Confidence 99999999999999998888888899999999 99999999999999999999999999888888887643 3556655
No 13
>KOG0273|consensus
Probab=99.94 E-value=7.7e-25 Score=147.52 Aligned_cols=152 Identities=15% Similarity=0.166 Sum_probs=126.7
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeee-----------------------------
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR----------------------------- 59 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~----------------------------- 59 (162)
...++++|.++.|+..|.++++++.|+++.+|+. .++.....+.+....
T Consensus 272 l~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~--~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~ 349 (524)
T KOG0273|consen 272 LGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDA--HTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGED 349 (524)
T ss_pred hhccCCceEEEEEcCCCCEEEeccCCccEEEEec--cCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCC
Confidence 4567899999999999999999999999999654 222122222211111
Q ss_pred -eccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCC---------CEEEEec
Q psy1859 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEY---------NTFATGG 128 (162)
Q Consensus 60 -~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~---------~~l~~~~ 128 (162)
......+|...|.++.|+|.+.+|++++.|++++||..........+..|...|..+ |+|.| ..+++++
T Consensus 350 ~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 350 RPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred CcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEee
Confidence 001345699999999999999999999999999999999988899999999999999 99853 4889999
Q ss_pred CCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 129 SDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 129 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++|++||+..+.+++++..|+.+|++++|+||
T Consensus 430 ~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~ 463 (524)
T KOG0273|consen 430 FDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPN 463 (524)
T ss_pred cCCeEEEEEccCCceeEeeccCCCceEEEEecCC
Confidence 9999999999999999999999999999999996
No 14
>KOG0645|consensus
Probab=99.93 E-value=2.7e-24 Score=136.22 Aligned_cols=141 Identities=13% Similarity=0.156 Sum_probs=122.7
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.++..+++++|+|.|++|++|+.|.++.||.-. ....+.+..+.+|.. .|.+++|+++|++||++++|.
T Consensus 59 ~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~--~~efecv~~lEGHEn---------EVK~Vaws~sG~~LATCSRDK 127 (312)
T KOG0645|consen 59 GHKRSVRSVAWSPHGRYLASASFDATVVIWKKE--DGEFECVATLEGHEN---------EVKCVAWSASGNYLATCSRDK 127 (312)
T ss_pred cchheeeeeeecCCCcEEEEeeccceEEEeecC--CCceeEEeeeecccc---------ceeEEEEcCCCCEEEEeeCCC
Confidence 356678899999999999999999999996443 333677888888876 599999999999999999999
Q ss_pred eEEEEeCCCc---cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC---ceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNK---KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN---KKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~---~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|.+|.+..+ .+...+..|...|..+ |+|...+|++++.|++|++|+-.. -.+++++.+|.+.|.+++|+|.
T Consensus 128 SVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~ 206 (312)
T KOG0645|consen 128 SVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI 206 (312)
T ss_pred eEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC
Confidence 9999999854 4567888999999999 999999999999999999998762 2579999999999999999873
No 15
>KOG0276|consensus
Probab=99.93 E-value=4e-25 Score=153.57 Aligned_cols=140 Identities=16% Similarity=0.219 Sum_probs=127.8
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSD 89 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d 89 (162)
.+...++||+.+|...+++++++|.+|++|+|+.. .....++.+|.. .|.+++|+|.. +.|++++-|
T Consensus 95 AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~---wa~~qtfeGH~H---------yVMqv~fnPkD~ntFaS~sLD 162 (794)
T KOG0276|consen 95 AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE---WACEQTFEGHEH---------YVMQVAFNPKDPNTFASASLD 162 (794)
T ss_pred ccccceeeeeecCCCCeEEecCCccEEEEeeccCc---eeeeeEEcCcce---------EEEEEEecCCCccceeeeecc
Confidence 35678899999999999999999999999999853 667777888776 79999999976 899999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcC--CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ--EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++|++|.+.+..+..++.+|...|.++ +-+ |..+|++|++|.+++|||..++.|++++.+|...|..+.|+|.
T Consensus 163 rTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~ 238 (794)
T KOG0276|consen 163 RTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPE 238 (794)
T ss_pred ccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCC
Confidence 999999999999999999999999999 555 5679999999999999999999999999999999999999983
No 16
>KOG0285|consensus
Probab=99.93 E-value=7.4e-25 Score=143.64 Aligned_cols=141 Identities=18% Similarity=0.260 Sum_probs=126.7
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
..+.+-+=++|+++.|...+|++|+.|++++|||+. + .+...++.+|.. .|..+++|+-..++.+++
T Consensus 146 Vi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDla--t--g~LkltltGhi~---------~vr~vavS~rHpYlFs~g 212 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLA--T--GQLKLTLTGHIE---------TVRGVAVSKRHPYLFSAG 212 (460)
T ss_pred hhhhccceEEEEeeCCCceeEEecCCCceeEEEEcc--c--CeEEEeecchhh---------eeeeeeecccCceEEEec
Confidence 344455667999999999999999999999995554 4 566677777765 699999999999999999
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.|++|+.||+...+.++.+.+|-+.|.++ .+|.-+.+++|+.|..+++||+|+...+.++.+|..+|.++.+.|
T Consensus 213 edk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~ 287 (460)
T KOG0285|consen 213 EDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQP 287 (460)
T ss_pred CCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeec
Confidence 99999999999999999999999999999 999999999999999999999999999999999999999998864
No 17
>KOG0286|consensus
Probab=99.93 E-value=2.8e-24 Score=137.46 Aligned_cols=137 Identities=20% Similarity=0.268 Sum_probs=120.1
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCC--cccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTG--PEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
|-..+|+|.++++++|+.|....||.+... ++.......+.+|.. .+.++.|-+ ...|++++.|.+..
T Consensus 100 VMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtg---------ylScC~f~d-D~~ilT~SGD~TCa 169 (343)
T KOG0286|consen 100 VMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTG---------YLSCCRFLD-DNHILTGSGDMTCA 169 (343)
T ss_pred EEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccc---------eeEEEEEcC-CCceEecCCCceEE
Confidence 345789999999999999999999776643 222344445566554 799999987 56788999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+||+++++.+..+.+|.+.|.++ ++| +++.+++|+-|+..++||+|.+.+++.|.+|.+.|++|+|.|+
T Consensus 170 lWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~ 240 (343)
T KOG0286|consen 170 LWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPS 240 (343)
T ss_pred EEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccC
Confidence 99999999999999999999999 999 9999999999999999999999999999999999999999996
No 18
>KOG0319|consensus
Probab=99.93 E-value=1e-24 Score=153.46 Aligned_cols=139 Identities=18% Similarity=0.236 Sum_probs=128.4
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+...|.|++++|+.+.+++|+.|.+.+||+++ + ......+.+|+. .|.++.|+|..+.++++|.|.
T Consensus 461 aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le--~--~~l~~vLsGH~R---------Gvw~V~Fs~~dq~laT~SgD~ 527 (775)
T KOG0319|consen 461 AHDKDINCVAIAPNDKLIATGSQDKTAKIWDLE--Q--LRLLGVLSGHTR---------GVWCVSFSKNDQLLATCSGDK 527 (775)
T ss_pred hhcccccceEecCCCceEEecccccceeeeccc--C--ceEEEEeeCCcc---------ceEEEEeccccceeEeccCCc
Confidence 355678999999999999999999999997776 3 667777888876 899999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+|+||.+.+..+++++.+|...|..+ |-.+++.|++++.||.+++|+++++.|+.++..|.+.|++++-+|+
T Consensus 528 TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~ 600 (775)
T KOG0319|consen 528 TVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPL 600 (775)
T ss_pred eEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCc
Confidence 99999999999999999999999999 9999999999999999999999999999999999999999988764
No 19
>KOG0286|consensus
Probab=99.92 E-value=7.4e-24 Score=135.53 Aligned_cols=141 Identities=24% Similarity=0.341 Sum_probs=118.8
Q ss_pred eeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEE
Q psy1859 7 RRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFAT 85 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~ 85 (162)
+....+.+.+.|+.|-+ ...+++++.|.+..+|+++. .+....|.+|.. .|.+++++| +++.|++
T Consensus 139 r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~----g~~~~~f~GH~g---------DV~slsl~p~~~ntFvS 204 (343)
T KOG0286|consen 139 RELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIET----GQQTQVFHGHTG---------DVMSLSLSPSDGNTFVS 204 (343)
T ss_pred eeecCccceeEEEEEcC-CCceEecCCCceEEEEEccc----ceEEEEecCCcc---------cEEEEecCCCCCCeEEe
Confidence 33455556667777777 55689999999999965543 445556666654 799999999 7899999
Q ss_pred ecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC--CCceeEEEecC
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY--DTGITSLCFSY 161 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~v~~v~~~p 161 (162)
|+.|+..++||++.+..++.|.+|.+.|..+ |.|+|.-+++|++|++.++||+|..+.+..+... ..+|++++||.
T Consensus 205 g~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~ 283 (343)
T KOG0286|consen 205 GGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSK 283 (343)
T ss_pred cccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcc
Confidence 9999999999999999999999999999999 9999999999999999999999999888888632 34899999974
No 20
>KOG0315|consensus
Probab=99.92 E-value=1.4e-23 Score=131.72 Aligned_cols=144 Identities=18% Similarity=0.216 Sum_probs=107.2
Q ss_pred cceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE
Q psy1859 4 IMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF 83 (162)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l 83 (162)
|...++.+ ...+.++.|..+|+.+++|+.||+++||+..... ....+. |..+|+++..+|++..|
T Consensus 75 Pv~t~e~h-~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~--~qR~~~------------~~spVn~vvlhpnQteL 139 (311)
T KOG0315|consen 75 PVATFEGH-TKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLS--CQRNYQ------------HNSPVNTVVLHPNQTEL 139 (311)
T ss_pred ceeEEecc-CCceEEEEEeecCeEEEecCCCceEEEEeccCcc--cchhcc------------CCCCcceEEecCCcceE
Confidence 33343332 3557899999999999999999999997765422 333332 22256666666666666
Q ss_pred EEecCCCeEEEEeCCCc-------------------------------------------------cceeeeeeccccee
Q psy1859 84 ATGGSDGYVNIWDGFNK-------------------------------------------------KRLCQFHRYDTGIT 114 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~~-------------------------------------------------~~~~~~~~~~~~v~ 114 (162)
++|..+|.|++||+... +++.+++.|.+.+.
T Consensus 140 is~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il 219 (311)
T KOG0315|consen 140 ISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHIL 219 (311)
T ss_pred EeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEE
Confidence 66666666666666522 13445667888888
Q ss_pred EE-EcCCCCEEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEEEecCC
Q psy1859 115 SL-FHQEYNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 115 ~~-~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+ +|||+++|++++.|.+++||+..+. +...++++|+..+++++||.|
T Consensus 220 ~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~d 269 (311)
T KOG0315|consen 220 RCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSAD 269 (311)
T ss_pred EEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccC
Confidence 88 9999999999999999999999887 667778899999999999975
No 21
>KOG0273|consensus
Probab=99.92 E-value=5.3e-24 Score=143.51 Aligned_cols=144 Identities=17% Similarity=0.244 Sum_probs=121.9
Q ss_pred ccceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC--
Q psy1859 3 YIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-- 80 (162)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-- 80 (162)
.|..++.- +.+.|.++.|+|.+..|+++++|++++||.... ......+..|.. .|..+.|+|.+
T Consensus 350 ~P~~t~~G-H~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~----~~~~~~l~~Hsk---------ei~t~~wsp~g~v 415 (524)
T KOG0273|consen 350 RPVKTFIG-HHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQ----SNSVHDLQAHSK---------EIYTIKWSPTGPV 415 (524)
T ss_pred Ccceeeec-ccCceEEEEECCCCceEEEecCCCeeEeeecCC----Ccchhhhhhhcc---------ceeeEeecCCCCc
Confidence 34555544 789999999999999999999999999965432 233334444544 69999999964
Q ss_pred -------CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCC
Q psy1859 81 -------NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT 152 (162)
Q Consensus 81 -------~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 152 (162)
..+++++.|+.|++||+..+.++..+..|..+|+++ |+|+|+++++|+.||.|.+|+.++++.++.+.+ .+
T Consensus 416 ~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~ 494 (524)
T KOG0273|consen 416 TSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG-TG 494 (524)
T ss_pred cCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecC-CC
Confidence 368999999999999999999999999999999999 999999999999999999999999999998875 45
Q ss_pred ceeEEEecC
Q psy1859 153 GITSLCFSY 161 (162)
Q Consensus 153 ~v~~v~~~p 161 (162)
.|..++|+-
T Consensus 495 ~Ifel~Wn~ 503 (524)
T KOG0273|consen 495 GIFELCWNA 503 (524)
T ss_pred eEEEEEEcC
Confidence 689999975
No 22
>KOG0263|consensus
Probab=99.92 E-value=2.5e-24 Score=152.21 Aligned_cols=118 Identities=26% Similarity=0.393 Sum_probs=104.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+-..+.|+.|+|+..++++|+.|.++++|+. .+ ...+..|.+|.. +|.+++|||.|++|++|+.|
T Consensus 532 aghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv--~~--G~~VRiF~GH~~---------~V~al~~Sp~Gr~LaSg~ed 598 (707)
T KOG0263|consen 532 AGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDV--ST--GNSVRIFTGHKG---------PVTALAFSPCGRYLASGDED 598 (707)
T ss_pred cccccccceEEECCcccccccCCCCceEEEEEc--CC--CcEEEEecCCCC---------ceEEEEEcCCCceEeecccC
Confidence 334456789999999999999999999999554 44 334555566654 89999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
+.|.+||+.+++++..+.+|.+.+.++ |+.+|..|++|+.|++|++||+..
T Consensus 599 ~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 599 GLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred CcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 999999999999999999999999999 999999999999999999999864
No 23
>KOG0275|consensus
Probab=99.92 E-value=1.1e-25 Score=146.44 Aligned_cols=148 Identities=22% Similarity=0.306 Sum_probs=126.4
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
-.-+.|+.|..|+|||++|++|+.||-|.+|++-..+ .+....+.... +..-+.++|.|+.|+.+...+++|+.|
T Consensus 210 Fg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GK--lrKDLkYQAqd---~fMMmd~aVlci~FSRDsEMlAsGsqD 284 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGK--LRKDLKYQAQD---NFMMMDDAVLCISFSRDSEMLASGSQD 284 (508)
T ss_pred cccccchhheeeCCCCceEeeccccceeeeehhccch--hhhhhhhhhhc---ceeecccceEEEeecccHHHhhccCcC
Confidence 3456788899999999999999999999998776533 32222222111 122355689999999999999999999
Q ss_pred CeEEEEeCCCccceeeee-ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFH-RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~-~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|.|++|.+++|.+++++. .|...++++ |+.|+..+.+++.|.++++.-+++|+++..+.+|.+.|+...|++|
T Consensus 285 GkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~d 359 (508)
T KOG0275|consen 285 GKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDD 359 (508)
T ss_pred CcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCC
Confidence 999999999999999997 899999999 9999999999999999999999999999999999999999999876
No 24
>KOG0645|consensus
Probab=99.92 E-value=6.2e-23 Score=130.07 Aligned_cols=146 Identities=12% Similarity=0.135 Sum_probs=120.4
Q ss_pred eeeccccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEE
Q psy1859 7 RRESSLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT 85 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 85 (162)
+..+..++.+..++|+|. |..|++++.|+.|++|.... .........+.. +|...|++++|+|.|++|++
T Consensus 8 ~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~-~~s~~ck~vld~--------~hkrsVRsvAwsp~g~~La~ 78 (312)
T KOG0645|consen 8 QKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSS-GDSWTCKTVLDD--------GHKRSVRSVAWSPHGRYLAS 78 (312)
T ss_pred EeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCC-CCcEEEEEeccc--------cchheeeeeeecCCCcEEEE
Confidence 344556778899999997 88999999999999966542 111222221111 25558999999999999999
Q ss_pred ecCCCeEEEEeCCCc--cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc---eeeeeeccCCCceeEEEe
Q psy1859 86 GGSDGYVNIWDGFNK--KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK---KRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~--~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~v~~ 159 (162)
++.|.++.||.-..+ +++..+.+|...|.++ |+++|.+|+|++.|..+.||.+..+ .++..++.|...|..+.|
T Consensus 79 aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~W 158 (312)
T KOG0645|consen 79 ASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIW 158 (312)
T ss_pred eeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEE
Confidence 999999999987654 6788999999999999 9999999999999999999999744 578889999999999999
Q ss_pred cC
Q psy1859 160 SY 161 (162)
Q Consensus 160 ~p 161 (162)
+|
T Consensus 159 HP 160 (312)
T KOG0645|consen 159 HP 160 (312)
T ss_pred cC
Confidence 99
No 25
>KOG0295|consensus
Probab=99.92 E-value=1.6e-23 Score=137.26 Aligned_cols=134 Identities=19% Similarity=0.224 Sum_probs=117.7
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC---------------
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--------------- 79 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--------------- 79 (162)
=++.+..+-||..+++++.|.++++|.....+ ....++.|.. +|.+++|.|.
T Consensus 237 wvr~v~v~~DGti~As~s~dqtl~vW~~~t~~----~k~~lR~hEh---------~vEci~wap~~~~~~i~~at~~~~~ 303 (406)
T KOG0295|consen 237 WVRMVRVNQDGTIIASCSNDQTLRVWVVATKQ----CKAELREHEH---------PVECIAWAPESSYPSISEATGSTNG 303 (406)
T ss_pred hEEEEEecCCeeEEEecCCCceEEEEEeccch----hhhhhhcccc---------ceEEEEecccccCcchhhccCCCCC
Confidence 35667888899999999999999998776543 3334455554 7999999874
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEE
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLC 158 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~ 158 (162)
++.+.+++.|+.|++||+.++.++.++.+|..+|..+ |+|.|+|++++.+|+++++||+++++++.++..|+.-|+++.
T Consensus 304 ~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lD 383 (406)
T KOG0295|consen 304 GQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLD 383 (406)
T ss_pred ccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEe
Confidence 2488999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred ecC
Q psy1859 159 FSY 161 (162)
Q Consensus 159 ~~p 161 (162)
|..
T Consensus 384 fh~ 386 (406)
T KOG0295|consen 384 FHK 386 (406)
T ss_pred cCC
Confidence 874
No 26
>PTZ00420 coronin; Provisional
Probab=99.92 E-value=9.5e-23 Score=145.33 Aligned_cols=137 Identities=19% Similarity=0.187 Sum_probs=109.3
Q ss_pred ccccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccc----eeeeeeeeeeeccCcccceeceEEEEecCCCC-EE
Q psy1859 10 SSLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQ----KMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN-TF 83 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l 83 (162)
..+...|.+++|+|+ +.+|++|+.|+.|+||++....... .....+.+ |...|.+++|+|++. ++
T Consensus 71 ~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~g---------H~~~V~sVaf~P~g~~iL 141 (568)
T PTZ00420 71 KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKG---------HKKKISIIDWNPMNYYIM 141 (568)
T ss_pred cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeec---------CCCcEEEEEECCCCCeEE
Confidence 445677899999996 7899999999999998765322000 11222333 445799999999985 46
Q ss_pred EEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeE
Q psy1859 84 ATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS 156 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 156 (162)
++++.|+.|++||+++++.+..+. +...+.++ |+|+|.+|++++.|+.|+|||+++++.+..+.+|.+.+.+
T Consensus 142 aSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s 214 (568)
T PTZ00420 142 CSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNT 214 (568)
T ss_pred EEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCcee
Confidence 789999999999999988776665 55779999 9999999999999999999999999999889889876543
No 27
>KOG0277|consensus
Probab=99.91 E-value=2.4e-23 Score=131.07 Aligned_cols=138 Identities=20% Similarity=0.302 Sum_probs=116.2
Q ss_pred cccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecC
Q psy1859 11 SLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~ 88 (162)
.++..+.++.|++ .++.+++++.|++|++|+-+ . +..+.++++|+. .|...+|+|.- +++++++.
T Consensus 102 EH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~--r--~~Sv~Tf~gh~~---------~Iy~a~~sp~~~nlfas~Sg 168 (311)
T KOG0277|consen 102 EHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPN--R--PNSVQTFNGHNS---------CIYQAAFSPHIPNLFASASG 168 (311)
T ss_pred hhhhheEEeccccccceeEEeeccCCceEeecCC--C--CcceEeecCCcc---------EEEEEecCCCCCCeEEEccC
Confidence 3566788899998 46678889999999995444 3 455667777765 79999999975 89999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCce-eeeeeccCCCceeEEEecC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~p 161 (162)
|+.+++||++.......+..|...+.++ |+. +...++||+.|+.|++||+++-+ ++..+.+|.-.|+.|.|||
T Consensus 169 d~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sp 244 (311)
T KOG0277|consen 169 DGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSP 244 (311)
T ss_pred CceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCc
Confidence 9999999999854444588999999999 988 77899999999999999998754 5777889999999999998
No 28
>KOG0283|consensus
Probab=99.91 E-value=3.7e-23 Score=147.15 Aligned_cols=154 Identities=19% Similarity=0.207 Sum_probs=119.3
Q ss_pred eeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcc------c--------------------c-----eee--
Q psy1859 6 QRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPE------M--------------------Q-----KMK-- 52 (162)
Q Consensus 6 ~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~------~--------------------~-----~~~-- 52 (162)
|+....+++.|.++.|++||+|||+|+.|+.|+||..-.... . . ...
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 444447889999999999999999999999999988754100 0 0 000
Q ss_pred ---eeeee-------e----eeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-E
Q psy1859 53 ---YAFKC-------H----RIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-F 117 (162)
Q Consensus 53 ---~~~~~-------~----~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~ 117 (162)
....+ . .......+|.+.|..+.|+.+ ++|++++.|.+|+||++....++..|. |...|+|+ |
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaF 417 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAF 417 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEe
Confidence 00000 0 000034679999999999974 588899999999999999888888884 89999999 9
Q ss_pred cC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 118 HQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 118 ~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+| |.+|+++|+-|+.++||++...+.+.-.. -..-|++++|+||
T Consensus 418 nPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lITAvcy~Pd 462 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDGKVRLWSISDKKVVDWND-LRDLITAVCYSPD 462 (712)
T ss_pred cccCCCcEeecccccceEEeecCcCeeEeehh-hhhhheeEEeccC
Confidence 99 88999999999999999998766555444 4468999999997
No 29
>KOG0265|consensus
Probab=99.90 E-value=4.6e-22 Score=127.69 Aligned_cols=142 Identities=18% Similarity=0.193 Sum_probs=104.4
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
...+++.|..+.|+|+|..|++|+.|..|.+|..... .+....+++|. ++|..+.|.++++.+++++.
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gd---ceN~~~lkgHs---------gAVM~l~~~~d~s~i~S~gt 110 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGD---CENFWVLKGHS---------GAVMELHGMRDGSHILSCGT 110 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeecCCcceEEEEecccc---ccceeeecccc---------ceeEeeeeccCCCEEEEecC
Confidence 3567889999999999999999999999999874322 23344455555 48999999999999999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCC---------------------------
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGF--------------------------- 139 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~--------------------------- 139 (162)
|..++.||.++|+.+++++.|..-+..+ -+. ...++.+++.|+++++||+|
T Consensus 111 Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~ 190 (338)
T KOG0265|consen 111 DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVI 190 (338)
T ss_pred CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccccccee
Confidence 9999999999998888777666555544 222 22344445555555555555
Q ss_pred --------------CceeeeeeccCCCceeEEEecCC
Q psy1859 140 --------------NKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 140 --------------~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+....++.+|.+.|+.+..+|+
T Consensus 191 sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~ 227 (338)
T KOG0265|consen 191 SGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRY 227 (338)
T ss_pred eccccCceeeeccccCcceEEeecccCceeeEEeccC
Confidence 44455556678888888877764
No 30
>KOG0291|consensus
Probab=99.90 E-value=2.7e-22 Score=142.05 Aligned_cols=137 Identities=18% Similarity=0.249 Sum_probs=119.5
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
-..+.+++++|||.++++|+.||.|+| ||..+ .-+..++..|.. .|+++.|+..|+.+++.+-||+|
T Consensus 350 ~~~i~~l~YSpDgq~iaTG~eDgKVKv--Wn~~S--gfC~vTFteHts---------~Vt~v~f~~~g~~llssSLDGtV 416 (893)
T KOG0291|consen 350 SDRITSLAYSPDGQLIATGAEDGKVKV--WNTQS--GFCFVTFTEHTS---------GVTAVQFTARGNVLLSSSLDGTV 416 (893)
T ss_pred ccceeeEEECCCCcEEEeccCCCcEEE--EeccC--ceEEEEeccCCC---------ceEEEEEEecCCEEEEeecCCeE
Confidence 345789999999999999999999999 55544 556677776655 89999999999999999999999
Q ss_pred EEEeCCCccceeeeeeccc-ceeEE-EcCCCCEEEEecCCC-eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 93 NIWDGFNKKRLCQFHRYDT-GITSL-FHQEYNTFATGGSDG-YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~-~v~~~-~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.||+...+..+++..... ...++ ..|.|.++++|+.|. .|.+|++++|+.+..+.+|+++|.+++|+|+
T Consensus 417 RAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~ 489 (893)
T KOG0291|consen 417 RAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPD 489 (893)
T ss_pred EeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccc
Confidence 9999999998888875433 45566 899999999999886 6999999999999999999999999999985
No 31
>KOG0285|consensus
Probab=99.90 E-value=2.3e-22 Score=132.12 Aligned_cols=142 Identities=15% Similarity=0.256 Sum_probs=122.4
Q ss_pred eeccccccE---EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE
Q psy1859 8 RESSLKFQT---RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA 84 (162)
Q Consensus 8 ~~~~~~~~~---~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~ 84 (162)
+..++.+|+ +.+++++-..|+.+++.|+.|+.||+.. .+.+..+-+ |...|.+++.+|.-..|+
T Consensus 185 LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~----nkvIR~YhG---------HlS~V~~L~lhPTldvl~ 251 (460)
T KOG0285|consen 185 LKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEY----NKVIRHYHG---------HLSGVYCLDLHPTLDVLV 251 (460)
T ss_pred EEEeecchhheeeeeeecccCceEEEecCCCeeEEEechh----hhhHHHhcc---------ccceeEEEeccccceeEE
Confidence 344455554 6688999999999999999999966654 334444344 445899999999999999
Q ss_pred EecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 85 TGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+|+.|..+++||+++...+..+.+|..+|..+ +.|-...+++|+.|++|++||++.|+.+.++..|...|.+++.+|.
T Consensus 252 t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~ 330 (460)
T KOG0285|consen 252 TGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPK 330 (460)
T ss_pred ecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCc
Confidence 99999999999999999999999999999999 8887778999999999999999999999999999999999999874
No 32
>KOG0315|consensus
Probab=99.90 E-value=6.1e-22 Score=124.49 Aligned_cols=153 Identities=15% Similarity=0.135 Sum_probs=121.2
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccc-------eeeeeee-----------------------e
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQ-------KMKYAFK-----------------------C 57 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~-------~~~~~~~-----------------------~ 57 (162)
++-....++.++..+|+...|++|..+|.|++||+....... ..+..+. .
T Consensus 119 R~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~ 198 (311)
T KOG0315|consen 119 RNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLN 198 (311)
T ss_pred hhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccC
Confidence 344455788999999999999999999999998875432110 0011110 0
Q ss_pred eeec------cCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCc-cceeeeeecccceeEE-EcCCCCEEEEecC
Q psy1859 58 HRIK------EDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSL-FHQEYNTFATGGS 129 (162)
Q Consensus 58 ~~~~------~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~ 129 (162)
+... .+..+|...+..+.+||++++|++++.|.+++||+..+- +.-..+.+|..++..+ ||.||+||+|++.
T Consensus 199 ~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTass 278 (311)
T KOG0315|consen 199 HQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASS 278 (311)
T ss_pred CCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCC
Confidence 0000 034567888999999999999999999999999999886 5566778899999999 9999999999999
Q ss_pred CCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 130 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
|+.+++||+..++.+..+.+|-....|++..
T Consensus 279 d~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 279 DHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred CCceeecccccCceeeecCCcccccEEEEee
Confidence 9999999999999999999998877777654
No 33
>KOG0308|consensus
Probab=99.90 E-value=2.5e-22 Score=140.14 Aligned_cols=152 Identities=15% Similarity=0.268 Sum_probs=128.1
Q ss_pred eccccccEEEEEE-eeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 9 ESSLKFQTRCIKC-FPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 9 ~~~~~~~~~~i~~-~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
...++..+.|+++ -++...+++|+.|+.|.||+++... .+.+..+..-+......++..+|++++.++.+..|++|+
T Consensus 113 ir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~--~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGg 190 (735)
T KOG0308|consen 113 IRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGT--ATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGG 190 (735)
T ss_pred hhcccchheeeeecccCceeEEecCCCccEEEEEccCcc--hhhhhhccccccccCCCCCccceeeeecCCcceEEEecC
Confidence 3456788999998 6788889999999999998887643 223333322222222335666899999999999999999
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..+.+++||.++++.+..+++|...|..+ .++||..+++++.||+|++||+...+++.++..|...|+++.-+|+
T Consensus 191 tek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~s 266 (735)
T KOG0308|consen 191 TEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPS 266 (735)
T ss_pred cccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCC
Confidence 99999999999999999999999999999 9999999999999999999999999999999999999999887763
No 34
>KOG0316|consensus
Probab=99.89 E-value=6e-22 Score=123.73 Aligned_cols=120 Identities=17% Similarity=0.250 Sum_probs=109.1
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
....++.+.++.|+-+|++.++++.|.++++ |++.. ...+.++.+|.. .|..++.+.+...|++|+.
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrL--WNp~r--g~liktYsghG~---------EVlD~~~s~Dnskf~s~Gg 79 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRL--WNPLR--GALIKTYSGHGH---------EVLDAALSSDNSKFASCGG 79 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEe--ecccc--cceeeeecCCCc---------eeeeccccccccccccCCC
Confidence 3567788999999999999999999999999 67766 566777777765 5999999999999999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
|..+.+||+.+|+.++++.+|...|..+ |+.+...+++|+.|.++++||-++.
T Consensus 80 Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~ 133 (307)
T KOG0316|consen 80 DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSR 133 (307)
T ss_pred CceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccC
Confidence 9999999999999999999999999999 9999999999999999999998753
No 35
>KOG0292|consensus
Probab=99.89 E-value=1.1e-22 Score=146.33 Aligned_cols=135 Identities=19% Similarity=0.302 Sum_probs=124.0
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+..++|+|....++++-.+|.|.+||+... ..+..|..| .++|++++|||.+.+|++|++|..|+
T Consensus 10 sRvKglsFHP~rPwILtslHsG~IQlWDYRM~----tli~rFdeH---------dGpVRgv~FH~~qplFVSGGDDykIk 76 (1202)
T KOG0292|consen 10 SRVKGLSFHPKRPWILTSLHSGVIQLWDYRMG----TLIDRFDEH---------DGPVRGVDFHPTQPLFVSGGDDYKIK 76 (1202)
T ss_pred ccccceecCCCCCEEEEeecCceeeeehhhhh----hHHhhhhcc---------CCccceeeecCCCCeEEecCCccEEE
Confidence 45678999999999999999999999888763 344455554 45899999999999999999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+|+..+.+++.++.+|-..|..+ |++.-.+++++++|.+|+||+..+.+++..+.+|.-.|.|..|+|
T Consensus 77 VWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhp 145 (1202)
T KOG0292|consen 77 VWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHP 145 (1202)
T ss_pred EEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCC
Confidence 99999999999999999999999 999999999999999999999999999999999999999999998
No 36
>KOG0282|consensus
Probab=99.89 E-value=2.8e-23 Score=140.26 Aligned_cols=140 Identities=26% Similarity=0.414 Sum_probs=121.3
Q ss_pred ccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 10 SSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 10 ~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
+.+...++++.|.| .+.+|++++.|+.|+||++-. . ...+.++.+|.. +|.++.|+++|..|++++.
T Consensus 211 ~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~-~--~~~lrtf~gH~k---------~Vrd~~~s~~g~~fLS~sf 278 (503)
T KOG0282|consen 211 SGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD-D--RRCLRTFKGHRK---------PVRDASFNNCGTSFLSASF 278 (503)
T ss_pred cCCccccchhhhccceeeEEEecCCCceEEEEEEec-C--cceehhhhcchh---------hhhhhhccccCCeeeeeec
Confidence 44455567788999 788999999999999977643 2 567778888776 8999999999999999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCC-CEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+.+++||+++|+++..+. .+..++++ |+|++ ..+++|+.|+.|+.||+|+++.++.+..|-+.|..+.|-++
T Consensus 279 D~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~ 353 (503)
T KOG0282|consen 279 DRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDE 353 (503)
T ss_pred ceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccC
Confidence 9999999999999998885 45667888 99987 78999999999999999999999999999999999998664
No 37
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.89 E-value=1e-20 Score=125.22 Aligned_cols=139 Identities=21% Similarity=0.300 Sum_probs=119.5
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.++..+.+++|+|+++++++++.+|.+.+|+++... ....+..+. ..+..+.|+|+++.+++++.++
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~----~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~~~ 73 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE----LLRTLKGHT---------GPVRDVAASADGTYLASGSSDK 73 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC----cEEEEecCC---------cceeEEEECCCCCEEEEEcCCC
Confidence 456789999999999999999999999997776432 233333333 3688999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+++||+.+++.+..+..+...+.++ |+|+++++++++.++.+.+||+++++....+..|...+.+++|+|+
T Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 146 (289)
T cd00200 74 TIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPD 146 (289)
T ss_pred eEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCc
Confidence 99999999888888888888899999 9999899999988999999999988888888889999999999984
No 38
>KOG0302|consensus
Probab=99.89 E-value=3.7e-22 Score=131.66 Aligned_cols=140 Identities=19% Similarity=0.260 Sum_probs=109.3
Q ss_pred ccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCccccee-eeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecC
Q psy1859 12 LKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKM-KYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGS 88 (162)
Q Consensus 12 ~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~ 88 (162)
+++.-..|+|||- ...|++|..-+.|++|...... .+. ...+.+ |...|..++|||.. ..|++|+.
T Consensus 210 hk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~--W~vd~~Pf~g---------H~~SVEDLqWSptE~~vfaScS~ 278 (440)
T KOG0302|consen 210 HKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGS--WKVDQRPFTG---------HTKSVEDLQWSPTEDGVFASCSC 278 (440)
T ss_pred cCccceeeecccccccccccCccccceEeeeeccCc--eeecCccccc---------cccchhhhccCCccCceEEeeec
Confidence 3455578999994 2347777777888986544322 221 222333 55589999999976 89999999
Q ss_pred CCeEEEEeCCCcc--ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC---ceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN---KKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~v~~v~~~pd 162 (162)
||.|+|||+|.+. .....+.|.+.|..+ |+..-.+|++|+.||+++|||+|+ ++++..++.|..+|++|.|+|.
T Consensus 279 DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~ 358 (440)
T KOG0302|consen 279 DGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPH 358 (440)
T ss_pred CceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccc
Confidence 9999999999872 233347899999999 999888999999999999999985 4578899999999999999983
No 39
>KOG0264|consensus
Probab=99.88 E-value=6.4e-22 Score=132.62 Aligned_cols=137 Identities=19% Similarity=0.246 Sum_probs=112.4
Q ss_pred EEEEEeeCC-CeEEEEcCCCcEEEEEecCCcccce---eeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCe
Q psy1859 17 RCIKCFPNK-QGYVLSSIEGRAAVEYLDTGPEMQK---MKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGY 91 (162)
Q Consensus 17 ~~i~~~~~~-~~l~~~~~~g~i~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~ 91 (162)
..++|++.. -.+++++.|+.+++|++.......+ ....+.+ |...|..++|++.. .+|++++.|+.
T Consensus 181 ~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~---------h~~~VeDV~~h~~h~~lF~sv~dd~~ 251 (422)
T KOG0264|consen 181 YGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSG---------HEDVVEDVAWHPLHEDLFGSVGDDGK 251 (422)
T ss_pred cccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeec---------CCcceehhhccccchhhheeecCCCe
Confidence 458999864 4688899999999988876542111 2222333 55589999999976 89999999999
Q ss_pred EEEEeCCC--ccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCce-eeeeeccCCCceeEEEecCC
Q psy1859 92 VNIWDGFN--KKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~--~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|||+|+ .++.....+|.+.+.++ |+| ++..||||+.|++|.+||+|+.+ ++.++.+|...|.+|.|+|+
T Consensus 252 L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh 327 (422)
T KOG0264|consen 252 LMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPH 327 (422)
T ss_pred EEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCC
Confidence 99999994 56666778899999999 999 67789999999999999999764 68889999999999999995
No 40
>KOG0772|consensus
Probab=99.88 E-value=1.4e-22 Score=138.39 Aligned_cols=144 Identities=23% Similarity=0.279 Sum_probs=104.8
Q ss_pred ccccE---EEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 12 LKFQT---RCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 12 ~~~~~---~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
.++|+ +|-+|+|. ...|++++.||+++||+.+......+.+.. +... +-.-+++.++|+|++++|++|.
T Consensus 264 TKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~-k~~~------g~Rv~~tsC~~nrdg~~iAagc 336 (641)
T KOG0772|consen 264 TKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKT-KPAG------GKRVPVTSCAWNRDGKLIAAGC 336 (641)
T ss_pred cCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEee-ccCC------CcccCceeeecCCCcchhhhcc
Confidence 45555 66779996 567999999999999887754422222222 1111 0112689999999999999999
Q ss_pred CCCeEEEEeCCCcc--c-eeeeeeccc--ceeEE-EcCCCCEEEEecCCCeEEEEeCCCce-eeeeeccCC--CceeEEE
Q psy1859 88 SDGYVNIWDGFNKK--R-LCQFHRYDT--GITSL-FHQEYNTFATGGSDGYVNIWDGFNKK-RLCQFHRYD--TGITSLC 158 (162)
Q Consensus 88 ~d~~v~~wd~~~~~--~-~~~~~~~~~--~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~--~~v~~v~ 158 (162)
.||.|.+|+..+.. + +..-..|.. .|+++ ||++|++|++-+.|+++++||+++.+ ++.+..+-. -+-+.++
T Consensus 337 ~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~ 416 (641)
T KOG0772|consen 337 LDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCC 416 (641)
T ss_pred cCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccc
Confidence 99999999986532 2 223345655 89999 99999999999999999999999764 455444322 2457889
Q ss_pred ecCC
Q psy1859 159 FSYD 162 (162)
Q Consensus 159 ~~pd 162 (162)
||||
T Consensus 417 FSPd 420 (641)
T KOG0772|consen 417 FSPD 420 (641)
T ss_pred cCCC
Confidence 9986
No 41
>KOG0289|consensus
Probab=99.88 E-value=2.8e-21 Score=129.49 Aligned_cols=144 Identities=21% Similarity=0.311 Sum_probs=115.3
Q ss_pred eeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 7 RRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
.....++..++.+..+|.|.||+.+++||...+.++.... .-.+..-+.... .+++.+|||||.+|.+|
T Consensus 297 ~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~--~lt~vs~~~s~v---------~~ts~~fHpDgLifgtg 365 (506)
T KOG0289|consen 297 TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGS--QLTVVSDETSDV---------EYTSAAFHPDGLIFGTG 365 (506)
T ss_pred cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCc--EEEEEeeccccc---------eeEEeeEcCCceEEecc
Confidence 3445677788889999999999999999998884443322 222222111111 48999999999999999
Q ss_pred cCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC-CceeEEEecC
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD-TGITSLCFSY 161 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~p 161 (162)
..|+.+++||+.++..+..|.+|.++|..+ |+.+|-+|+++++|+.|++||+|..+...++.... .++.+++|.+
T Consensus 366 t~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~ 442 (506)
T KOG0289|consen 366 TPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQ 442 (506)
T ss_pred CCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcC
Confidence 999999999999999999999999999999 99999999999999999999999888777765332 2577777754
No 42
>KOG0641|consensus
Probab=99.88 E-value=7.4e-21 Score=118.61 Aligned_cols=157 Identities=15% Similarity=0.168 Sum_probs=119.7
Q ss_pred ceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccc-eeeeeeeeeeecc---------------------
Q psy1859 5 MQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQ-KMKYAFKCHRIKE--------------------- 62 (162)
Q Consensus 5 ~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~~~--------------------- 62 (162)
+.+....+++.|.|.+|+|+|+.+++|++|.+|++..|+..+... .....+..|...-
T Consensus 81 ~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~ga 160 (350)
T KOG0641|consen 81 LCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGA 160 (350)
T ss_pred EeeeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCC
Confidence 345567789999999999999999999999999997776554211 1122222222110
Q ss_pred -----------------CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeee--c-----ccceeEE-E
Q psy1859 63 -----------------DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR--Y-----DTGITSL-F 117 (162)
Q Consensus 63 -----------------~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~--~-----~~~v~~~-~ 117 (162)
...+|++.|.++ ++=++..|++|+.|.+|+.||++-..++..+.. | .+.+..+ .
T Consensus 161 gdc~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v 239 (350)
T KOG0641|consen 161 GDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV 239 (350)
T ss_pred CcceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE
Confidence 123455555554 222467899999999999999998777766542 1 2567788 9
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 118 HQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 118 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|.|++|++|-.|....+||++.++.++.+..|...|.++.|+|.
T Consensus 240 dpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~ 284 (350)
T KOG0641|consen 240 DPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPG 284 (350)
T ss_pred CCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCC
Confidence 999999999999999999999999999999999999999999983
No 43
>KOG0319|consensus
Probab=99.88 E-value=1.9e-21 Score=137.29 Aligned_cols=154 Identities=15% Similarity=0.115 Sum_probs=122.5
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc-------------------------
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE------------------------- 62 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~------------------------- 62 (162)
+...++.-+.++....+|-+|++|+.|.++++|.++........+....+|...-
T Consensus 360 ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W 439 (775)
T KOG0319|consen 360 IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLW 439 (775)
T ss_pred EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEe
Confidence 4444555566666556678899999999999987743321111111111121110
Q ss_pred ------------------CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCE
Q psy1859 63 ------------------DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNT 123 (162)
Q Consensus 63 ------------------~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~ 123 (162)
....|...|.+++.+|+.+++++|+.|...++|++.+......+.+|...+.++ |+|..+.
T Consensus 440 ~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~ 519 (775)
T KOG0319|consen 440 DLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQL 519 (775)
T ss_pred cCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccce
Confidence 124588899999999999999999999999999999988999999999999999 9999999
Q ss_pred EEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 124 FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 124 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
++|++.|.+|+||.+.+..++.++.+|...|..+.|-.
T Consensus 520 laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~ 557 (775)
T KOG0319|consen 520 LATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIR 557 (775)
T ss_pred eEeccCCceEEEEEeccceeeeeecCccceeEeeeeee
Confidence 99999999999999999999999999999999988853
No 44
>KOG0973|consensus
Probab=99.88 E-value=2.5e-21 Score=141.20 Aligned_cols=143 Identities=14% Similarity=0.119 Sum_probs=118.8
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCc--------------ccceeeeeeeeeeeccCcccceeceEEEEe
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGP--------------EMQKMKYAFKCHRIKEDGIEKIYPVNAISF 76 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 76 (162)
.+.+.+.|+.|+|||++||+|++|+.|.||..+... ...+....+.+|. ..|..+.|
T Consensus 67 ~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~---------~DV~Dv~W 137 (942)
T KOG0973|consen 67 DHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHD---------SDVLDVNW 137 (942)
T ss_pred cccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCC---------Cccceecc
Confidence 345778999999999999999999999999887310 0123444455554 47999999
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-----
Q psy1859 77 HQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY----- 150 (162)
Q Consensus 77 ~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----- 150 (162)
+|++.++++++.|+.|.+||.++.+.+..+.+|.+.|..+ |+|-|+|+++-+.|++|+||++.+-...+.+..+
T Consensus 138 sp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~ 217 (942)
T KOG0973|consen 138 SPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESP 217 (942)
T ss_pred CCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCC
Confidence 9999999999999999999999999999999999999999 9999999999999999999997665555555432
Q ss_pred -CCceeEEEecCC
Q psy1859 151 -DTGITSLCFSYD 162 (162)
Q Consensus 151 -~~~v~~v~~~pd 162 (162)
......+.||||
T Consensus 218 ~~T~f~RlSWSPD 230 (942)
T KOG0973|consen 218 LTTFFLRLSWSPD 230 (942)
T ss_pred CcceeeecccCCC
Confidence 235788999997
No 45
>KOG0306|consensus
Probab=99.88 E-value=1.7e-21 Score=137.99 Aligned_cols=141 Identities=23% Similarity=0.360 Sum_probs=128.1
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.-.+...+.|+++|||+++|+++--|.+++||..|. .+...++-+|.. ||.||+.+|+++++++|+.
T Consensus 504 tLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDt----lKFflsLYGHkL---------PV~smDIS~DSklivTgSA 570 (888)
T KOG0306|consen 504 TLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDT----LKFFLSLYGHKL---------PVLSMDISPDSKLIVTGSA 570 (888)
T ss_pred EEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecc----eeeeeeeccccc---------ceeEEeccCCcCeEEeccC
Confidence 345678889999999999999999999999987775 344455556666 8999999999999999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|..|++|-+.=|.+.+.+-+|...|.++ |-|+...+++++.|+.++-||-.....++++.+|...|++++.+|+
T Consensus 571 DKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~ 645 (888)
T KOG0306|consen 571 DKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPN 645 (888)
T ss_pred CCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCC
Confidence 9999999999999999999999999999 9999999999999999999999999999999999999999999885
No 46
>KOG0647|consensus
Probab=99.87 E-value=3.8e-21 Score=123.69 Aligned_cols=130 Identities=15% Similarity=0.201 Sum_probs=103.0
Q ss_pred eeccccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 8 RESSLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
+..+-...|.+|+|||. ..+++++++|++|++|++.... .... .. ...|.++|.+++|+.+|..+++|
T Consensus 22 v~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g-~~~~-ka---------~~~~~~PvL~v~WsddgskVf~g 90 (347)
T KOG0647|consen 22 VPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG-QLVP-KA---------QQSHDGPVLDVCWSDDGSKVFSG 90 (347)
T ss_pred cCCCcccchheeEeccccCceEEecccCCceEEEEEecCC-cccc-hh---------hhccCCCeEEEEEccCCceEEee
Confidence 34555678899999995 5556688999999998776532 0111 11 11255689999999999999999
Q ss_pred cCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCC--EEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN--TFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
+.|+.+++||+.++ ....+..|..++..+ |-+... .|+||+.|.+|+.||.|...++.++..
T Consensus 91 ~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L 155 (347)
T KOG0647|consen 91 GCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL 155 (347)
T ss_pred ccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec
Confidence 99999999999998 556667899999999 766444 899999999999999999888877753
No 47
>KOG0295|consensus
Probab=99.87 E-value=7.1e-21 Score=125.05 Aligned_cols=137 Identities=16% Similarity=0.191 Sum_probs=122.3
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
.+-.+.++++-|.|.++++++.|.+|+.|+++. .-.+.++.+|+. =|..++.+.||.++++++.|..
T Consensus 192 h~h~vS~V~f~P~gd~ilS~srD~tik~We~~t----g~cv~t~~~h~e---------wvr~v~v~~DGti~As~s~dqt 258 (406)
T KOG0295|consen 192 HEHGVSSVFFLPLGDHILSCSRDNTIKAWECDT----GYCVKTFPGHSE---------WVRMVRVNQDGTIIASCSNDQT 258 (406)
T ss_pred cccceeeEEEEecCCeeeecccccceeEEeccc----ceeEEeccCchH---------hEEEEEecCCeeEEEecCCCce
Confidence 344568899999999999999999999977765 456777788765 5999999999999999999999
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCC---------------CCEEEEecCCCeEEEEeCCCceeeeeeccCCCcee
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQE---------------YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGIT 155 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~---------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~ 155 (162)
+++|-+.++++...++.|..++.++ |.|. ++++.+++.|++|++||+.++.++-++.+|.+.|.
T Consensus 259 l~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr 338 (406)
T KOG0295|consen 259 LRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVR 338 (406)
T ss_pred EEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceee
Confidence 9999999998888888999999888 7763 35999999999999999999999999999999999
Q ss_pred EEEecC
Q psy1859 156 SLCFSY 161 (162)
Q Consensus 156 ~v~~~p 161 (162)
+++|+|
T Consensus 339 ~~af~p 344 (406)
T KOG0295|consen 339 GVAFSP 344 (406)
T ss_pred eeEEcC
Confidence 999997
No 48
>KOG0318|consensus
Probab=99.87 E-value=1.2e-20 Score=129.19 Aligned_cols=146 Identities=17% Similarity=0.231 Sum_probs=113.1
Q ss_pred cceeeeccccc---cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC
Q psy1859 4 IMQRRESSLKF---QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 4 ~~~~~~~~~~~---~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
|..++..+... -+.|+.|+|||.+|++++.||++.+ ||..+ .+.+..+.. +.+|.+.|.+++|+||+
T Consensus 178 PPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~i--yDGkt--ge~vg~l~~------~~aHkGsIfalsWsPDs 247 (603)
T KOG0318|consen 178 PPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYI--YDGKT--GEKVGELED------SDAHKGSIFALSWSPDS 247 (603)
T ss_pred CCeeeeecccccccceeeEEECCCCCeEEEecCCccEEE--EcCCC--ccEEEEecC------CCCccccEEEEEECCCC
Confidence 33344444333 4688999999999999999999999 88776 445555443 22477799999999999
Q ss_pred CEEEEecCCCeEEEEeCCCcccee-------------------------------------------eeeecccceeEE-
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKRLC-------------------------------------------QFHRYDTGITSL- 116 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~~~-------------------------------------------~~~~~~~~v~~~- 116 (162)
..+++++.|.++++||+.+.++++ .+.+|...|+++
T Consensus 248 ~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLt 327 (603)
T KOG0318|consen 248 TQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALT 327 (603)
T ss_pred ceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEE
Confidence 999999999999999998654332 335678899999
Q ss_pred EcCCCCEEEEecCCCeEEEEeCCCceeeeee-ccCCCceeEEEe
Q psy1859 117 FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF-HRYDTGITSLCF 159 (162)
Q Consensus 117 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~v~~ 159 (162)
.+|+++++++|+.||.|.-|+..++..-+.. +.|...|.+++-
T Consensus 328 v~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~ 371 (603)
T KOG0318|consen 328 VSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAA 371 (603)
T ss_pred EcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEee
Confidence 9999999999999999999999887653322 456666666654
No 49
>KOG0292|consensus
Probab=99.87 E-value=6.6e-21 Score=137.43 Aligned_cols=138 Identities=17% Similarity=0.247 Sum_probs=122.6
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+.|+++.++|+|.+.+|++|++|-.|++|.+.. .++.+++.+|-. .|+.+.||+....++++|+|-
T Consensus 49 eHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~----rrclftL~GHlD---------YVRt~~FHheyPWIlSASDDQ 115 (1202)
T KOG0292|consen 49 EHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT----RRCLFTLLGHLD---------YVRTVFFHHEYPWILSASDDQ 115 (1202)
T ss_pred ccCCccceeeecCCCCeEEecCCccEEEEEeccc----ceehhhhccccc---------eeEEeeccCCCceEEEccCCC
Confidence 4678999999999999999999999999977765 568888888765 799999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce---------------------------
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK--------------------------- 142 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~--------------------------- 142 (162)
+|+||+..+++++..+.+|...|.|. |+|....+++++-|.+|+|||+..-+
T Consensus 116 TIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~D 195 (1202)
T KOG0292|consen 116 TIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTD 195 (1202)
T ss_pred eEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcC
Confidence 99999999999999999999999999 99999999999999999999975210
Q ss_pred --eeeeeccCCCceeEEEecC
Q psy1859 143 --RLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 143 --~~~~~~~~~~~v~~v~~~p 161 (162)
.-+.+.+|..+|+-++|+|
T Consensus 196 aVVK~VLEGHDRGVNwaAfhp 216 (1202)
T KOG0292|consen 196 AVVKHVLEGHDRGVNWAAFHP 216 (1202)
T ss_pred eeeeeeecccccccceEEecC
Confidence 1223568999999999998
No 50
>KOG0275|consensus
Probab=99.87 E-value=6.4e-22 Score=129.00 Aligned_cols=137 Identities=20% Similarity=0.281 Sum_probs=116.5
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+...+.|++|+.|...+++|+.||.|++|.+.... +...+. .+|...|+++.|+.++..+++++.|.
T Consensus 261 Mmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~----ClRrFd--------rAHtkGvt~l~FSrD~SqiLS~sfD~ 328 (508)
T KOG0275|consen 261 MMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ----CLRRFD--------RAHTKGVTCLSFSRDNSQILSASFDQ 328 (508)
T ss_pred ecccceEEEeecccHHHhhccCcCCcEEEEEEecch----HHHHhh--------hhhccCeeEEEEccCcchhhcccccc
Confidence 356778999999999999999999999998776533 332222 23555899999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC--CceeEEEe
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD--TGITSLCF 159 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~v~~v~~ 159 (162)
.+++--+++|++++.+++|.+.++.. |.+||.++++++.||+|++|+.++..|+.+++... -+|.++-.
T Consensus 329 tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~ 400 (508)
T KOG0275|consen 329 TVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVIL 400 (508)
T ss_pred eEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEE
Confidence 99999999999999999999999999 99999999999999999999999999988886432 35555543
No 51
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.86 E-value=6.6e-20 Score=121.34 Aligned_cols=138 Identities=23% Similarity=0.322 Sum_probs=116.5
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
....+.+++++|++.++++++.++.+.+|+... .+....+..+. ..+.++.|+|+++.+++++.++.
T Consensus 134 ~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~----~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~~~~ 200 (289)
T cd00200 134 HTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT----GKCVATLTGHT---------GEVNSVAFSPDGEKLLSSSSDGT 200 (289)
T ss_pred CCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccc----cccceeEecCc---------cccceEEECCCcCEEEEecCCCc
Confidence 456689999999988888888899999966543 22333333333 36999999999989999999999
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+++||++.++.+..+..+...+.++ |+|++.++++++.|+.|++||+.+++....+..|...|.+++|+|+
T Consensus 201 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 272 (289)
T cd00200 201 IKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPD 272 (289)
T ss_pred EEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCC
Confidence 9999999888888887788899999 9999888988888999999999988888888889999999999985
No 52
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.86 E-value=4.1e-20 Score=138.55 Aligned_cols=139 Identities=12% Similarity=0.184 Sum_probs=112.3
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccce----eeeeeeeeeeccCcccceeceEEEEecCC-CCEEEEe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQK----MKYAFKCHRIKEDGIEKIYPVNAISFHQE-YNTFATG 86 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~ 86 (162)
+.+.+.+++|+|+++++++|+.|+.|+||+.+....... ....+.. ...+.+++|+|. +.+|+++
T Consensus 482 ~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~----------~~~v~~l~~~~~~~~~las~ 551 (793)
T PLN00181 482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELAS----------RSKLSGICWNSYIKSQVASS 551 (793)
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecc----------cCceeeEEeccCCCCEEEEE
Confidence 456688999999999999999999999987643110010 1111111 226899999885 5899999
Q ss_pred cCCCeEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+.|+.|++||+.+++.+..+..|...|+++ |+| ++.+|++|+.|+.|++||++++..+..+..+ ..|.++.|++
T Consensus 552 ~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~ 627 (793)
T PLN00181 552 NFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPS 627 (793)
T ss_pred eCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeC
Confidence 999999999999998888999999999999 997 7899999999999999999999888877654 5788898854
No 53
>KOG0293|consensus
Probab=99.86 E-value=9.1e-21 Score=126.60 Aligned_cols=146 Identities=16% Similarity=0.186 Sum_probs=115.3
Q ss_pred eeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEE
Q psy1859 6 QRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT 85 (162)
Q Consensus 6 ~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 85 (162)
.+....+...+.-+.||++|++||+++.|.+..+|....... .+...++.+|.. +|..+.||||.+++++
T Consensus 217 ~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~-~kl~~tlvgh~~---------~V~yi~wSPDdryLla 286 (519)
T KOG0293|consen 217 WQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH-FKLKKTLVGHSQ---------PVSYIMWSPDDRYLLA 286 (519)
T ss_pred hhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc-eeeeeeeecccC---------ceEEEEECCCCCeEEe
Confidence 334455678889999999999999999999999987765431 344555555544 8999999999999999
Q ss_pred ecCCCeEEEEeCCCccceeeeee-cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC-CceeEEEecCC
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQFHR-YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD-TGITSLCFSYD 162 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~~~-~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~pd 162 (162)
|+.+..+.+||+.+|.....+.. +...+.++ |.|||..+++|+.|+.+..||+. |.....+++-. ..|.+++.++|
T Consensus 287 Cg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~D 365 (519)
T KOG0293|consen 287 CGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYD 365 (519)
T ss_pred cCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCC
Confidence 99999999999999988776653 35667778 99999999999999999999995 45444444332 34777777665
No 54
>KOG0318|consensus
Probab=99.86 E-value=5.5e-20 Score=125.93 Aligned_cols=149 Identities=20% Similarity=0.258 Sum_probs=107.4
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeee-------------------------------
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRI------------------------------- 60 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~------------------------------- 60 (162)
+..+++...++|.|.++++|...|+|+||++-..+ .....+++.-..
T Consensus 58 H~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~--hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~D 135 (603)
T KOG0318|consen 58 HAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKE--HILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWD 135 (603)
T ss_pred ccceeEEEEeCCCceEEeecCCcCcEEEEeccCcc--eeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEec
Confidence 34455667799999999999999999998764422 111111111110
Q ss_pred ----ccCcccceeceEEEEecCCC-CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEE
Q psy1859 61 ----KEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVN 134 (162)
Q Consensus 61 ----~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~ 134 (162)
...-.+|...|.+++|-|.. -.+++|+.|+.|.+|+-..-+-...+..|..-|.++ |+|||.++++.+.||++.
T Consensus 136 SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~ 215 (603)
T KOG0318|consen 136 SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIY 215 (603)
T ss_pred CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEE
Confidence 00223455566666666655 456666666666666654444444556788899999 999999999999999999
Q ss_pred EEeCCCceeeeeec---cCCCceeEEEecCC
Q psy1859 135 IWDGFNKKRLCQFH---RYDTGITSLCFSYD 162 (162)
Q Consensus 135 iwd~~~~~~~~~~~---~~~~~v~~v~~~pd 162 (162)
+||-++++.+..+. +|.+.|.+++|+||
T Consensus 216 iyDGktge~vg~l~~~~aHkGsIfalsWsPD 246 (603)
T KOG0318|consen 216 IYDGKTGEKVGELEDSDAHKGSIFALSWSPD 246 (603)
T ss_pred EEcCCCccEEEEecCCCCccccEEEEEECCC
Confidence 99999999999887 89999999999998
No 55
>KOG0277|consensus
Probab=99.86 E-value=1.1e-20 Score=119.13 Aligned_cols=137 Identities=20% Similarity=0.255 Sum_probs=112.9
Q ss_pred cccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCC
Q psy1859 13 KFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDG 90 (162)
Q Consensus 13 ~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~ 90 (162)
......++|+++ .+.+++++.||.++||+.-.. ..++..++.|.. .|.++.|++.. +.+++++.|+
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~---s~Pi~~~kEH~~---------EV~Svdwn~~~r~~~ltsSWD~ 127 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLTMP---SKPIHKFKEHKR---------EVYSVDWNTVRRRIFLTSSWDG 127 (311)
T ss_pred ccceeEeeecCCCcceEEEEecCceEEEeccCCC---CcchhHHHhhhh---------heEEeccccccceeEEeeccCC
Confidence 345567999997 456888999999999763322 345666666655 69999999965 7788889999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+|++|+...++.++++.+|..-|... |+| .+..+++++.|+.+++||++.......+..|...+.++.|+.
T Consensus 128 TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~k 200 (311)
T KOG0277|consen 128 TIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSK 200 (311)
T ss_pred ceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccc
Confidence 99999999999999999999999999 999 778999999999999999986544444888999999999873
No 56
>KOG0269|consensus
Probab=99.86 E-value=3.7e-21 Score=136.52 Aligned_cols=138 Identities=18% Similarity=0.289 Sum_probs=109.9
Q ss_pred cccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecC
Q psy1859 11 SLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~ 88 (162)
.++..+.++.|++. ..+|++|+.||+|++||+..++ ...++.+... .|+.++|+|.. ..|+++..
T Consensus 131 EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~----S~~t~~~nSE---------SiRDV~fsp~~~~~F~s~~d 197 (839)
T KOG0269|consen 131 EHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK----SKSTFRSNSE---------SIRDVKFSPGYGNKFASIHD 197 (839)
T ss_pred hhccceeeeeeccCCccEEEecCCCceEEEEeeeccc----ccccccccch---------hhhceeeccCCCceEEEecC
Confidence 34555678899985 5778999999999997776543 2233344332 69999999964 89999999
Q ss_pred CCeEEEEeCCCc-cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee--eeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNK-KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR--LCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~v~~~pd 162 (162)
.|.+++||++.. ++...+.+|.+++.++ |+|++.+||||+.|++|+|||..+++. +.++. -..+|..|.|-|+
T Consensus 198 sG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~ 274 (839)
T KOG0269|consen 198 SGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPA 274 (839)
T ss_pred CceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccC
Confidence 999999999985 4567888999999999 999999999999999999999986543 44333 3457899999885
No 57
>KOG1446|consensus
Probab=99.86 E-value=1.1e-19 Score=117.45 Aligned_cols=155 Identities=12% Similarity=0.174 Sum_probs=117.3
Q ss_pred eeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeee--------------------------
Q psy1859 6 QRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-------------------------- 59 (162)
Q Consensus 6 ~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~-------------------------- 59 (162)
-+....++..|..|+.+|-+..+++++.|++|++|++...+ ......+.+.+
T Consensus 93 lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~--cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~R 170 (311)
T KOG1446|consen 93 LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKK--CQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLR 170 (311)
T ss_pred EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCC--CceEEecCCCcceeECCCCcEEEEecCCCeEEEEEec
Confidence 34456677788999999999999999999999998876443 21111100000
Q ss_pred ecc--------CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccce---eEE-EcCCCCEEEEe
Q psy1859 60 IKE--------DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGI---TSL-FHQEYNTFATG 127 (162)
Q Consensus 60 ~~~--------~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v---~~~-~~~~~~~l~~~ 127 (162)
... -..+-....+.+.|+|+|+.++.++..+.+++.|.-+|..+..+..+...- ... |+||++++++|
T Consensus 171 s~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~g 250 (311)
T KOG1446|consen 171 SFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSG 250 (311)
T ss_pred ccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEe
Confidence 000 011223357789999999999999999999999999998888777654332 234 99999999999
Q ss_pred cCCCeEEEEeCCCceeeeeecc-CCCceeEEEecCC
Q psy1859 128 GSDGYVNIWDGFNKKRLCQFHR-YDTGITSLCFSYD 162 (162)
Q Consensus 128 ~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~pd 162 (162)
+.||+|.+|+++++..+..+.+ +.+++.++.|+|.
T Consensus 251 s~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~ 286 (311)
T KOG1446|consen 251 SDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPR 286 (311)
T ss_pred cCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCc
Confidence 9999999999999999999987 6889999999983
No 58
>PTZ00421 coronin; Provisional
Probab=99.86 E-value=5.2e-20 Score=130.42 Aligned_cols=142 Identities=16% Similarity=0.145 Sum_probs=104.3
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeee--e--eeccCcccceeceEEEEecC-CCCEEEEecCCCe
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKC--H--RIKEDGIEKIYPVNAISFHQ-EYNTFATGGSDGY 91 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~ 91 (162)
+....++++..+++++.+.....| +... ...+..+.. . .......+|.+.|.+++|+| ++++|++++.|+.
T Consensus 24 ~~~~~~~d~~~~~~~n~~~~a~~w--~~~g--g~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dgt 99 (493)
T PTZ00421 24 TPSTALWDCSNTIACNDRFIAVPW--QQLG--STAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGT 99 (493)
T ss_pred ccccccCCCCCcEeECCceEEEEE--ecCC--ceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCE
Confidence 334455666666666666655554 3222 111111110 0 00001234667899999999 7789999999999
Q ss_pred EEEEeCCCc-------cceeeeeecccceeEE-EcCCC-CEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 92 VNIWDGFNK-------KRLCQFHRYDTGITSL-FHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~~-------~~~~~~~~~~~~v~~~-~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|++||+..+ +++..+.+|...|.++ |+|++ .+|++++.|+.|+|||+++++.+..+..|...|.+++|+||
T Consensus 100 IkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spd 179 (493)
T PTZ00421 100 IMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLD 179 (493)
T ss_pred EEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECC
Confidence 999999764 3466778899999999 99975 69999999999999999999998889999999999999986
No 59
>KOG1407|consensus
Probab=99.86 E-value=5.2e-21 Score=120.99 Aligned_cols=140 Identities=19% Similarity=0.262 Sum_probs=108.7
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~ 90 (162)
...++.+++|+.+|..|++|+.|+++.+|..+... ........+ |.+.|..+.|+|.. .+|++++.|.
T Consensus 19 ~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r--~~~~~~~~g---------h~~svdql~w~~~~~d~~atas~dk 87 (313)
T KOG1407|consen 19 HVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR--FRKELVYRG---------HTDSVDQLCWDPKHPDLFATASGDK 87 (313)
T ss_pred hhhcceEEEEcccCceeeecccCCceEEEEecchh--hhhhhcccC---------CCcchhhheeCCCCCcceEEecCCc
Confidence 45677899999999999999999999998777543 222223333 44467888887765 6788888888
Q ss_pred eEEEEeCCCcccee------------------------------------------------------------------
Q psy1859 91 YVNIWDGFNKKRLC------------------------------------------------------------------ 104 (162)
Q Consensus 91 ~v~~wd~~~~~~~~------------------------------------------------------------------ 104 (162)
.|++||.+.++++.
T Consensus 88 ~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~G 167 (313)
T KOG1407|consen 88 TIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNG 167 (313)
T ss_pred eEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecC
Confidence 88888887554322
Q ss_pred ----------------eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 105 ----------------QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 105 ----------------~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.++.|.....++ |+|+|+++++|+.|..+.+||+...-|++.+..+.-+|..++|+.|
T Consensus 168 lG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~d 242 (313)
T KOG1407|consen 168 LGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHD 242 (313)
T ss_pred CceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccC
Confidence 223455555677 9999999999999999999999988888888888999999999865
No 60
>KOG1407|consensus
Probab=99.86 E-value=2.7e-20 Score=117.80 Aligned_cols=138 Identities=19% Similarity=0.246 Sum_probs=120.9
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
..+..+..++|+-++.+|+..+..|.|.|..|- . .+++.+++.|+. ...||.|+|+|++|++|+.|-
T Consensus 145 ~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsyp--s--Lkpv~si~AH~s---------nCicI~f~p~GryfA~GsADA 211 (313)
T KOG1407|consen 145 QFKFEVNEISWNNSNDLFFLTNGLGCVEILSYP--S--LKPVQSIKAHPS---------NCICIEFDPDGRYFATGSADA 211 (313)
T ss_pred cccceeeeeeecCCCCEEEEecCCceEEEEecc--c--cccccccccCCc---------ceEEEEECCCCceEeeccccc
Confidence 345566778999778888888888999994443 3 677777777775 599999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+.+||+..--+.+.+..+.-+|..+ |+.+|++|+++++|..|-|=++.+|..+..++ +.++-..|+|+|.
T Consensus 212 lvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk 283 (313)
T KOG1407|consen 212 LVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPK 283 (313)
T ss_pred eeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCC
Confidence 99999999888888899999999999 99999999999999999999999999998886 7778999999984
No 61
>KOG0305|consensus
Probab=99.86 E-value=8.3e-21 Score=131.60 Aligned_cols=135 Identities=17% Similarity=0.315 Sum_probs=116.9
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
.+.++++.|+++|.+|++|..+|.+.||+.. + .+....+.++ |...|.+++|+ +..+.+|+.++.|
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~--~--~k~~~~~~~~--------h~~rvg~laW~--~~~lssGsr~~~I 282 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVK--E--QKKTRTLRGS--------HASRVGSLAWN--SSVLSSGSRDGKI 282 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehh--h--ccccccccCC--------cCceeEEEecc--CceEEEecCCCcE
Confidence 7889999999999999999999999995543 3 3344444441 33479999998 6789999999999
Q ss_pred EEEeCCCccceee-eeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 93 NIWDGFNKKRLCQ-FHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 93 ~~wd~~~~~~~~~-~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
..+|++..+.... +..|...|..+ |++|+.++++|+.|+.+.|||.....+..++..|...|.+++|+|
T Consensus 283 ~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP 353 (484)
T KOG0305|consen 283 LNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCP 353 (484)
T ss_pred EEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCC
Confidence 9999998766554 78899999999 999999999999999999999988888888999999999999998
No 62
>KOG0973|consensus
Probab=99.85 E-value=1.4e-20 Score=137.36 Aligned_cols=150 Identities=14% Similarity=0.184 Sum_probs=120.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEc--CCCcEEEEEecCCcccce-eeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSS--IEGRAAVEYLDTGPEMQK-MKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~--~~g~i~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
.+....|.+|.++|++..+++|+ .|+.+.||..+.-..... ....++.+ ...-..|.+.|.|+.|+|+|++||+|
T Consensus 10 ~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~--l~~m~~h~~sv~CVR~S~dG~~lAsG 87 (942)
T KOG0973|consen 10 NHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKH--LCTMDDHDGSVNCVRFSPDGSYLASG 87 (942)
T ss_pred ccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchh--heeeccccCceeEEEECCCCCeEeec
Confidence 34456688999999999999998 888889987654220000 00001111 01122377799999999999999999
Q ss_pred cCCCeEEEEeCCC------------------ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy1859 87 GSDGYVNIWDGFN------------------KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 87 ~~d~~v~~wd~~~------------------~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
++|..|.+|.... ++.+..+.+|.+.|.++ |+|++.+|++++.|++|.|||.++.+.+.++
T Consensus 88 SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl 167 (942)
T KOG0973|consen 88 SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVL 167 (942)
T ss_pred cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeee
Confidence 9999999998772 13566788999999999 9999999999999999999999999999999
Q ss_pred ccCCCceeEEEecC
Q psy1859 148 HRYDTGITSLCFSY 161 (162)
Q Consensus 148 ~~~~~~v~~v~~~p 161 (162)
.+|.+.|-.+.|.|
T Consensus 168 ~~H~s~VKGvs~DP 181 (942)
T KOG0973|consen 168 RGHQSLVKGVSWDP 181 (942)
T ss_pred ecccccccceEECC
Confidence 99999999999988
No 63
>KOG0296|consensus
Probab=99.85 E-value=7e-20 Score=120.42 Aligned_cols=139 Identities=17% Similarity=0.150 Sum_probs=121.0
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.++..+.+++.+|+.+++++|+.|....||+... ......+.+|.. .|+++.|+.+|.+|++|..+|
T Consensus 62 ~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~----ge~~~eltgHKD---------SVt~~~FshdgtlLATGdmsG 128 (399)
T KOG0296|consen 62 KHTDSVFAVSLHPNNNLVATGGGDDLAFLWDIST----GEFAGELTGHKD---------SVTCCSFSHDGTLLATGDMSG 128 (399)
T ss_pred hcCCceEEEEeCCCCceEEecCCCceEEEEEccC----CcceeEecCCCC---------ceEEEEEccCceEEEecCCCc
Confidence 4567789999999999999999999999965543 335556666655 799999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++|+..++.....+......+.-+ |||.+..|++|+.||.+.+|.+.++...+.+.+|..++++=.|.||
T Consensus 129 ~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pd 201 (399)
T KOG0296|consen 129 KVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPD 201 (399)
T ss_pred cEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCC
Confidence 99999999998887776556677778 9999999999999999999999988788889999999999999886
No 64
>KOG0306|consensus
Probab=99.85 E-value=4.4e-20 Score=131.00 Aligned_cols=148 Identities=18% Similarity=0.129 Sum_probs=125.5
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcc---cceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPE---MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
.+.+.+..++.+||++.+++|+.|.+|++|++..... ..+....+.-.+. ......|.|+++||++++++++-
T Consensus 452 AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rt----Lel~ddvL~v~~Spdgk~LaVsL 527 (888)
T KOG0306|consen 452 AHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRT----LELEDDVLCVSVSPDGKLLAVSL 527 (888)
T ss_pred ccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceE----EeccccEEEEEEcCCCcEEEEEe
Confidence 5678899999999999999999999999999854321 1222222221111 11334799999999999999999
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
-|.++++|-+.+-+....+.+|.-+|.++ ++||+++++||+.|..|++|-+.-|.|...+.+|.+.|.++.|.|+
T Consensus 528 LdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~ 603 (888)
T KOG0306|consen 528 LDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPK 603 (888)
T ss_pred ccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEccc
Confidence 99999999999998888999999999999 9999999999999999999999999999999999999999999984
No 65
>KOG0267|consensus
Probab=99.85 E-value=8.6e-22 Score=138.90 Aligned_cols=139 Identities=22% Similarity=0.282 Sum_probs=124.7
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...|.++.++++...+++|+.+|+|++||+.. .+.+.++.||.. .+.+++|+|.+.+++.++.|
T Consensus 67 ~~hespIeSl~f~~~E~LlaagsasgtiK~wDlee----Ak~vrtLtgh~~---------~~~sv~f~P~~~~~a~gStd 133 (825)
T KOG0267|consen 67 TGHESPIESLTFDTSERLLAAGSASGTIKVWDLEE----AKIVRTLTGHLL---------NITSVDFHPYGEFFASGSTD 133 (825)
T ss_pred eccCCcceeeecCcchhhhcccccCCceeeeehhh----hhhhhhhhcccc---------CcceeeeccceEEecccccc
Confidence 34567789999999999999999999999976653 456667778776 59999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+.+.+||.+...+...+..|...+..+ |+|+|++++.+++|..++|||+..|+.+..|..|.+.+.++.|+|
T Consensus 134 td~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp 206 (825)
T KOG0267|consen 134 TDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHP 206 (825)
T ss_pred ccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCc
Confidence 999999999888899998888888888 999999999999999999999999999999999999999999987
No 66
>KOG0302|consensus
Probab=99.85 E-value=1.7e-20 Score=123.95 Aligned_cols=117 Identities=27% Similarity=0.447 Sum_probs=95.2
Q ss_pred ccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 12 LKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
++..|..++|||. ...|++|+.||.|+||+..... .+.....+.|. ..|..|.|+....+|++|+.||
T Consensus 256 H~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~--~~~~~~~kAh~---------sDVNVISWnr~~~lLasG~DdG 324 (440)
T KOG0302|consen 256 HTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGP--KKAAVSTKAHN---------SDVNVISWNRREPLLASGGDDG 324 (440)
T ss_pred cccchhhhccCCccCceEEeeecCceEEEEEecCCC--ccceeEeeccC---------CceeeEEccCCcceeeecCCCc
Confidence 4444566889995 5678999999999997776543 22223334444 3799999999888999999999
Q ss_pred eEEEEeCCC---ccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCC
Q psy1859 91 YVNIWDGFN---KKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 91 ~v~~wd~~~---~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~ 139 (162)
.++|||+++ ++++..++-|..+|+++ |+| +...+++++.|.+|.+||+.
T Consensus 325 t~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 325 TLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred eEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 999999997 57888999999999999 999 55678888999999999985
No 67
>KOG0772|consensus
Probab=99.85 E-value=4.4e-20 Score=126.36 Aligned_cols=148 Identities=22% Similarity=0.292 Sum_probs=108.3
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccc---eeeeeeeeeeecc-----------------------------
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQ---KMKYAFKCHRIKE----------------------------- 62 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~---~~~~~~~~~~~~~----------------------------- 62 (162)
-|.++++.|.|.+|++|+.|-+|++|+|....... +.+....+|..+.
T Consensus 169 ~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~ 248 (641)
T KOG0772|consen 169 IVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEI 248 (641)
T ss_pred EEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCcee
Confidence 35668899999999999999999999985432111 1111111111111
Q ss_pred --------------CcccceeceEEEEecCCC-CEEEEecCCCeEEEEeCCCccc-eeeee-----ecccceeEE-EcCC
Q psy1859 63 --------------DGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIWDGFNKKR-LCQFH-----RYDTGITSL-FHQE 120 (162)
Q Consensus 63 --------------~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~-~~~~~-----~~~~~v~~~-~~~~ 120 (162)
+-++|.+.+++..|+|.. ..|++++.||++++||+.+.+. .+.++ +..-+++.+ |+|+
T Consensus 249 ~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrd 328 (641)
T KOG0772|consen 249 VEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRD 328 (641)
T ss_pred eeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCC
Confidence 346899999999999987 7899999999999999987543 33333 223467788 9999
Q ss_pred CCEEEEecCCCeEEEEeCCCce---eeeeeccCCC--ceeEEEecCC
Q psy1859 121 YNTFATGGSDGYVNIWDGFNKK---RLCQFHRYDT--GITSLCFSYD 162 (162)
Q Consensus 121 ~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~--~v~~v~~~pd 162 (162)
|+++++|+.||.|.+|+.+... ....-.+|.. .|+||.||+|
T Consensus 329 g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~d 375 (641)
T KOG0772|consen 329 GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYD 375 (641)
T ss_pred cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccc
Confidence 9999999999999999985432 1333356766 8999999986
No 68
>KOG0296|consensus
Probab=99.85 E-value=1.1e-19 Score=119.56 Aligned_cols=128 Identities=16% Similarity=0.236 Sum_probs=108.9
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
....++..+.++.|+.+|.+|++|.-+|.+.||..+... .+..+..... .+.=+.|||.+..|++|+
T Consensus 101 eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~--~~~~~~~e~~-----------dieWl~WHp~a~illAG~ 167 (399)
T KOG0296|consen 101 ELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGG--EQWKLDQEVE-----------DIEWLKWHPRAHILLAGS 167 (399)
T ss_pred EecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCc--eEEEeecccC-----------ceEEEEecccccEEEeec
Confidence 345678889999999999999999999999996655433 3322221111 478899999999999999
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
.||.+.+|.+.+....+.+.+|..++++= |.|+|+.++++..||+|++||.+++.++.++.
T Consensus 168 ~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 168 TDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred CCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence 99999999999988889999999999988 99999999999999999999999999888775
No 69
>KOG0264|consensus
Probab=99.85 E-value=3.9e-20 Score=124.16 Aligned_cols=144 Identities=18% Similarity=0.223 Sum_probs=111.4
Q ss_pred eeccccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEE
Q psy1859 8 RESSLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFAT 85 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~ 85 (162)
....+...+..++|++- ...|++++.|+.+.|||....+ .+....... |.+.|.+++|+|.+ .+||+
T Consensus 222 ~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~--~~~~~~~~a---------h~~~vn~~~fnp~~~~ilAT 290 (422)
T KOG0264|consen 222 IFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNT--SKPSHSVKA---------HSAEVNCVAFNPFNEFILAT 290 (422)
T ss_pred EeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCC--CCCcccccc---------cCCceeEEEeCCCCCceEEe
Confidence 44556667778899985 5678888999999996655311 333333333 55589999999976 78999
Q ss_pred ecCCCeEEEEeCCCc-cceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCc-e-------------eeeeec
Q psy1859 86 GGSDGYVNIWDGFNK-KRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNK-K-------------RLCQFH 148 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~-~-------------~~~~~~ 148 (162)
|+.|++|.+||+|+- +++..+..|...|..+ |+| ....|++++.|+.+.+||+..- + .+-.-.
T Consensus 291 ~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~Hg 370 (422)
T KOG0264|consen 291 GSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHG 370 (422)
T ss_pred ccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEec
Confidence 999999999999984 6788999999999999 999 4558899999999999998531 1 122234
Q ss_pred cCCCceeEEEecCC
Q psy1859 149 RYDTGITSLCFSYD 162 (162)
Q Consensus 149 ~~~~~v~~v~~~pd 162 (162)
+|...|..+.|+|+
T Consensus 371 GH~~kV~DfsWnp~ 384 (422)
T KOG0264|consen 371 GHTAKVSDFSWNPN 384 (422)
T ss_pred CcccccccccCCCC
Confidence 78889999999985
No 70
>KOG0640|consensus
Probab=99.85 E-value=4.1e-20 Score=119.83 Aligned_cols=154 Identities=16% Similarity=0.163 Sum_probs=118.1
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCC--cccceeee---eeeeeeeccCcccceeceEEEEecCCCCE
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTG--PEMQKMKY---AFKCHRIKEDGIEKIYPVNAISFHQEYNT 82 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 82 (162)
..+.++...++.+|+|||.++++|+.|..|+|.+.+.. +.+.+... +...|+..+....|.+.|.++.|+|....
T Consensus 107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~I 186 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETI 186 (430)
T ss_pred EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhhe
Confidence 45668888999999999999999999999999444310 00011111 11223444456678889999999999999
Q ss_pred EEEecCCCeEEEEeCCCccceeeee--ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee---ccCCCceeE
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLCQFH--RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF---HRYDTGITS 156 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~ 156 (162)
|++++.|+.|++||+.+....+.++ ....++.++ |+|.|.++++|.+...+++||+.+-++.... .+|.+.|++
T Consensus 187 LiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~ 266 (430)
T KOG0640|consen 187 LISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQ 266 (430)
T ss_pred EEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeE
Confidence 9999999999999998753332222 245679999 9999999999999999999999998875443 368899999
Q ss_pred EEecC
Q psy1859 157 LCFSY 161 (162)
Q Consensus 157 v~~~p 161 (162)
|.+++
T Consensus 267 V~Ys~ 271 (430)
T KOG0640|consen 267 VRYSS 271 (430)
T ss_pred EEecC
Confidence 99886
No 71
>KOG0291|consensus
Probab=99.85 E-value=2.1e-19 Score=127.65 Aligned_cols=136 Identities=15% Similarity=0.260 Sum_probs=113.9
Q ss_pred ccccEEEEEEeeCCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
-...+..++|+..|.+++.|+.. |.+-||.|..+. .++...+|- ..+.+++++|||+++++|+.||
T Consensus 306 s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEs----YVlKQQgH~---------~~i~~l~YSpDgq~iaTG~eDg 372 (893)
T KOG0291|consen 306 SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSES----YVLKQQGHS---------DRITSLAYSPDGQLIATGAEDG 372 (893)
T ss_pred ccceeeEEEecccCCEEEEcCCccceEEEEEeeccc----eeeeccccc---------cceeeEEECCCCcEEEeccCCC
Confidence 34567888999999999998666 899999988643 444444444 4799999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC-CceeEEEec
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD-TGITSLCFS 160 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~ 160 (162)
.|++||..++-++.++..|.+.++.+ |+..|+.+++++-||+|+.||++..+..+++.... -...+++..
T Consensus 373 KVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD 444 (893)
T KOG0291|consen 373 KVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVD 444 (893)
T ss_pred cEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEc
Confidence 99999999999999999999999999 99999999999999999999999988888886433 133444443
No 72
>KOG0310|consensus
Probab=99.84 E-value=5.1e-20 Score=124.78 Aligned_cols=140 Identities=16% Similarity=0.212 Sum_probs=115.4
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEe
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATG 86 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~ 86 (162)
..+.++..+.++.|..||+.|++|...|.|+| ||.++ ......+..|+. +|..+.|+|++ ..+++|
T Consensus 63 ~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~v--fD~k~--r~iLR~~~ah~a---------pv~~~~f~~~d~t~l~s~ 129 (487)
T KOG0310|consen 63 TFSRFKDVVYSVDFRSDGRLLAAGDESGHVKV--FDMKS--RVILRQLYAHQA---------PVHVTKFSPQDNTMLVSG 129 (487)
T ss_pred hHHhhccceeEEEeecCCeEEEccCCcCcEEE--ecccc--HHHHHHHhhccC---------ceeEEEecccCCeEEEec
Confidence 35667788899999999999999999999999 55443 344445555554 89999999987 677889
Q ss_pred cCCCeEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEEEecC
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p 161 (162)
++|+.+++||+.+...+..+.+|...|.+. |+| ++..+++|+.||.|++||++.. ..+..+ .|..+|.++.|-|
T Consensus 130 sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lp 206 (487)
T KOG0310|consen 130 SDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALP 206 (487)
T ss_pred CCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcC
Confidence 999999999999887766888999999999 999 4558999999999999999987 455555 4888898888765
No 73
>KOG1036|consensus
Probab=99.84 E-value=4.9e-20 Score=118.73 Aligned_cols=129 Identities=60% Similarity=0.942 Sum_probs=117.8
Q ss_pred CcccceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC
Q psy1859 1 MGYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
|..+.++.+++++.+++||++.|++.-+++++-||.|.+=.+|.........+.|++|+..+.+.....+|.+|+|+|-.
T Consensus 165 ~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~ 244 (323)
T KOG1036|consen 165 LDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIH 244 (323)
T ss_pred ccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecccc
Confidence 45678899999999999999999988899999999999877887765677889999999999888999999999999998
Q ss_pred CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~ 129 (162)
..|++|+.||.|.+||+.+.+.+..+......|..+ |+.+|..||+++.
T Consensus 245 ~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 245 GTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred ceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 999999999999999999999999998887889999 9999999999963
No 74
>KOG1009|consensus
Probab=99.84 E-value=2.3e-19 Score=119.41 Aligned_cols=147 Identities=14% Similarity=0.155 Sum_probs=116.9
Q ss_pred ccccccEEEEEEeeCCC-eEEEEcCCCcEEEEEecCCcccce-eeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 10 SSLKFQTRCIKCFPNKQ-GYVLSSIEGRAAVEYLDTGPEMQK-MKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~-~l~~~~~~g~i~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
-.-..++..+.|.++.. .+++|+.|..|++|..+....... ....+ +.. ...|..+|+++.|+|+|.++++|+
T Consensus 10 wH~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y--~s~---Ls~H~~aVN~vRf~p~gelLASg~ 84 (434)
T KOG1009|consen 10 WHDHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEY--LSS---LSRHTRAVNVVRFSPDGELLASGG 84 (434)
T ss_pred ecCCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEE--eec---ccCCcceeEEEEEcCCcCeeeecC
Confidence 33456778888988765 899999999999998875442221 11111 110 122666899999999999999999
Q ss_pred CCCeEEEEeCC--------C--------ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC
Q psy1859 88 SDGYVNIWDGF--------N--------KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY 150 (162)
Q Consensus 88 ~d~~v~~wd~~--------~--------~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 150 (162)
.+|.+.+|-.. + +...+.+..|...+..+ |+|++.++++++-|+.+++||+..|+....+..|
T Consensus 85 D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh 164 (434)
T KOG1009|consen 85 DGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDH 164 (434)
T ss_pred CCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccc
Confidence 99999999766 2 12234556788999999 9999999999999999999999999999999999
Q ss_pred CCceeEEEecC
Q psy1859 151 DTGITSLCFSY 161 (162)
Q Consensus 151 ~~~v~~v~~~p 161 (162)
...|..++|.|
T Consensus 165 ~~yvqgvawDp 175 (434)
T KOG1009|consen 165 EHYVQGVAWDP 175 (434)
T ss_pred ccccceeecch
Confidence 99999999987
No 75
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.84 E-value=7.4e-19 Score=131.87 Aligned_cols=137 Identities=17% Similarity=0.201 Sum_probs=111.2
Q ss_pred cccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEec-CCCCEEEEecC
Q psy1859 11 SLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFH-QEYNTFATGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~l~~~~~ 88 (162)
.+...+.+++|+| ++.+|++|+.|+.|++|++... .....+..+. .+.++.|+ +++..|++|+.
T Consensus 573 ~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~----~~~~~~~~~~----------~v~~v~~~~~~g~~latgs~ 638 (793)
T PLN00181 573 EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG----VSIGTIKTKA----------NICCVQFPSESGRSLAFGSA 638 (793)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC----cEEEEEecCC----------CeEEEEEeCCCCCEEEEEeC
Confidence 3556789999997 7889999999999999776532 2333333221 58899995 46899999999
Q ss_pred CCeEEEEeCCCcc-ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc------eeeeeeccCCCceeEEEec
Q psy1859 89 DGYVNIWDGFNKK-RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK------KRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 89 d~~v~~wd~~~~~-~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~------~~~~~~~~~~~~v~~v~~~ 160 (162)
|+.|++||+++.+ .+..+.+|...+..+ |. ++.++++++.|+.|++||++.+ +++..+.+|...+..++|+
T Consensus 639 dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s 717 (793)
T PLN00181 639 DHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLS 717 (793)
T ss_pred CCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEc
Confidence 9999999998765 566777899999999 97 7889999999999999999743 5677888999999999998
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
|+
T Consensus 718 ~~ 719 (793)
T PLN00181 718 VS 719 (793)
T ss_pred CC
Confidence 85
No 76
>KOG0276|consensus
Probab=99.84 E-value=1.7e-19 Score=125.99 Aligned_cols=141 Identities=18% Similarity=0.241 Sum_probs=124.5
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.......+.++.++|....++++-.+|.+.||+++.+. .+.++.-... +|++..|-+..+.+++|+.
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt----mVksfeV~~~---------PvRa~kfiaRknWiv~GsD 75 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT----MVKSFEVSEV---------PVRAAKFIARKNWIVTGSD 75 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEecccce----eeeeeeeccc---------chhhheeeeccceEEEecC
Confidence 33456778999999999999999999999998888754 4444444333 7999999998899999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~pd 162 (162)
|..|++|+..+++.+..+..|...+.++ .||...++.++++|-+|++||...+ .+.+++++|.-.|.+|+|+|.
T Consensus 76 D~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPk 151 (794)
T KOG0276|consen 76 DMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPK 151 (794)
T ss_pred CceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCC
Confidence 9999999999999999999999999999 9999999999999999999999766 468889999999999999984
No 77
>KOG0313|consensus
Probab=99.83 E-value=1.5e-19 Score=119.42 Aligned_cols=134 Identities=18% Similarity=0.225 Sum_probs=110.5
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
...+.++.|++ ...+++++.|.+|+.||+.... .+..+.+.. .+.+++.+|..++|++|+.|..+
T Consensus 260 t~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~----~~~~~~~~k----------sl~~i~~~~~~~Ll~~gssdr~i 324 (423)
T KOG0313|consen 260 TEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGG----LKSTLTTNK----------SLNCISYSPLSKLLASGSSDRHI 324 (423)
T ss_pred ccceeeEEEcC-CCceEeecccceEEEEEeeccc----ceeeeecCc----------ceeEeecccccceeeecCCCCce
Confidence 34456677887 6678899999999997776643 333333333 59999999999999999999999
Q ss_pred EEEeCCCcc---ceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCce-eeeeeccCCCceeEEEecC
Q psy1859 93 NIWDGFNKK---RLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 93 ~~wd~~~~~---~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~p 161 (162)
++||.+++. ..+.+.+|.+.|..+ |+| +...|++++.|+++++||+|+.+ ++..+.+|.+.|.++.|+.
T Consensus 325 rl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~ 399 (423)
T KOG0313|consen 325 RLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE 399 (423)
T ss_pred eecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccC
Confidence 999999853 355778999999999 999 45578889999999999999887 8889999999999999973
No 78
>KOG0281|consensus
Probab=99.83 E-value=1.2e-20 Score=123.98 Aligned_cols=146 Identities=16% Similarity=0.271 Sum_probs=112.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceee--------------eeeeeeeecc-------------
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMK--------------YAFKCHRIKE------------- 62 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~--------------~~~~~~~~~~------------- 62 (162)
..+.+.+.|+.+. .+.+++|+.|.+|++|+++..+...... +...+.....
T Consensus 234 ~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it 311 (499)
T KOG0281|consen 234 TGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDIT 311 (499)
T ss_pred hcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHH
Confidence 3344444555444 5688999999999998887654211100 0000100000
Q ss_pred ---CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 63 ---DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 63 ---~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
-..+|.++|..+.|+. +++++++.|.+|++|++.++..++.+.+|...|.|+ + .++++++|+.|.+|++||+
T Consensus 312 ~rrVLvGHrAaVNvVdfd~--kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi 387 (499)
T KOG0281|consen 312 LRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI 387 (499)
T ss_pred HHHHHhhhhhheeeecccc--ceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEec
Confidence 2346778999999965 599999999999999999999999999999999998 6 4889999999999999999
Q ss_pred CCceeeeeeccCCCceeEEEecC
Q psy1859 139 FNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 139 ~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
..|.+++.+++|+.-|.++.|..
T Consensus 388 ~~G~cLRvLeGHEeLvRciRFd~ 410 (499)
T KOG0281|consen 388 ECGACLRVLEGHEELVRCIRFDN 410 (499)
T ss_pred cccHHHHHHhchHHhhhheeecC
Confidence 99999999999999999999863
No 79
>KOG0640|consensus
Probab=99.83 E-value=2.2e-19 Score=116.52 Aligned_cols=126 Identities=13% Similarity=0.255 Sum_probs=105.1
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.++++|+|+|.|.++++|+....+++|+.+. .+.-.... + ...|.+.|+++.+++.+++.++++.||.|+
T Consensus 217 ~~vrsiSfHPsGefllvgTdHp~~rlYdv~T----~Qcfvsan--P----d~qht~ai~~V~Ys~t~~lYvTaSkDG~Ik 286 (430)
T KOG0640|consen 217 EPVRSISFHPSGEFLLVGTDHPTLRLYDVNT----YQCFVSAN--P----DDQHTGAITQVRYSSTGSLYVTASKDGAIK 286 (430)
T ss_pred ceeeeEeecCCCceEEEecCCCceeEEeccc----eeEeeecC--c----ccccccceeEEEecCCccEEEEeccCCcEE
Confidence 4678999999999999999999999965554 23322212 1 223778999999999999999999999999
Q ss_pred EEeCCCccceeeee-ecc-cceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 94 IWDGFNKKRLCQFH-RYD-TGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 94 ~wd~~~~~~~~~~~-~~~-~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
+||--+++++.++. .|+ ..|.+. |..+|+|+.+++.|..+++|.+.+++++.++.+
T Consensus 287 lwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtG 345 (430)
T KOG0640|consen 287 LWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTG 345 (430)
T ss_pred eeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEec
Confidence 99999999998886 343 467777 999999999999999999999999999888754
No 80
>PTZ00420 coronin; Provisional
Probab=99.82 E-value=1.6e-18 Score=123.94 Aligned_cols=117 Identities=21% Similarity=0.338 Sum_probs=91.3
Q ss_pred cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC-CCEEEEecCCCeEEEEeCCCcc--------c
Q psy1859 32 SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE-YNTFATGGSDGYVNIWDGFNKK--------R 102 (162)
Q Consensus 32 ~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~d~~v~~wd~~~~~--------~ 102 (162)
+.++.+++|+.. . ......+.+|. .+|.+++|+|+ +.+|++|+.|+.|++||+.++. +
T Consensus 51 G~~gvI~L~~~~--r--~~~v~~L~gH~---------~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p 117 (568)
T PTZ00420 51 GLIGAIRLENQM--R--KPPVIKLKGHT---------SSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDP 117 (568)
T ss_pred CceeEEEeeecC--C--CceEEEEcCCC---------CCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccc
Confidence 445677775433 2 23444455554 48999999997 6899999999999999998642 2
Q ss_pred eeeeeecccceeEE-EcCCCCE-EEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 103 LCQFHRYDTGITSL-FHQEYNT-FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 103 ~~~~~~~~~~v~~~-~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+..+.+|...|.++ |+|++.. +++++.|+.|++||+++++.+..+. |...|.+++|+||
T Consensus 118 ~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~Slswspd 178 (568)
T PTZ00420 118 QCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIK 178 (568)
T ss_pred eEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCC
Confidence 34567888999999 9998875 5788999999999999988777665 5678999999986
No 81
>KOG0639|consensus
Probab=99.82 E-value=2.1e-20 Score=127.76 Aligned_cols=137 Identities=20% Similarity=0.308 Sum_probs=115.6
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..++++...|||+.|++|+.-.++.||++...+ ......+..... ...+++.+||.++..++..||.|.
T Consensus 466 nyiRSckL~pdgrtLivGGeastlsiWDLAapT--prikaeltssap---------aCyALa~spDakvcFsccsdGnI~ 534 (705)
T KOG0639|consen 466 NYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPT--PRIKAELTSSAP---------ACYALAISPDAKVCFSCCSDGNIA 534 (705)
T ss_pred cceeeeEecCCCceEEeccccceeeeeeccCCC--cchhhhcCCcch---------hhhhhhcCCccceeeeeccCCcEE
Confidence 456778899999999999999999997776655 555445444333 588999999999999999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|||+.+...++.+.+|...+.|| +++||..|.||+-|++|+-||+++++.++... ..+.|.++-.+|+
T Consensus 535 vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg~cP~ 603 (705)
T KOG0639|consen 535 VWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGYCPT 603 (705)
T ss_pred EEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhhheecccCCC
Confidence 99999999999999999999999 99999999999999999999999988665543 4567777766663
No 82
>KOG4283|consensus
Probab=99.82 E-value=1.5e-18 Score=111.90 Aligned_cols=155 Identities=14% Similarity=0.135 Sum_probs=121.6
Q ss_pred eeeeccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccce--eeeeeeeeeeccCcccceeceEEEEecCCC-C
Q psy1859 6 QRRESSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQK--MKYAFKCHRIKEDGIEKIYPVNAISFHQEY-N 81 (162)
Q Consensus 6 ~~~~~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~ 81 (162)
..+..++.+.+.++...+ .|+++++|+.||.+.+|++...+.... .+..-.+.-.......|...|..+.|-|-. -
T Consensus 36 ~d~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtG 115 (397)
T KOG4283|consen 36 KDFVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTG 115 (397)
T ss_pred cceeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCc
Confidence 456677889999999988 699999999999999977754431111 111112211222355699999999999965 7
Q ss_pred EEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcC---CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEE
Q psy1859 82 TFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ---EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL 157 (162)
Q Consensus 82 ~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v 157 (162)
.|.+++.|..+++||..+-+....++ -.+.|+.- ++| ...++++|..|-+|+++|+.+|...+.+.+|.+.|.+|
T Consensus 116 mFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV 194 (397)
T KOG4283|consen 116 MFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAV 194 (397)
T ss_pred eeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEE
Confidence 88999999999999999887766664 34566666 777 45689999999999999999999999999999999999
Q ss_pred EecC
Q psy1859 158 CFSY 161 (162)
Q Consensus 158 ~~~p 161 (162)
.|+|
T Consensus 195 ~Wsp 198 (397)
T KOG4283|consen 195 EWSP 198 (397)
T ss_pred Eecc
Confidence 9998
No 83
>KOG0293|consensus
Probab=99.82 E-value=9e-19 Score=117.21 Aligned_cols=154 Identities=16% Similarity=0.191 Sum_probs=117.6
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCccc-ce-----eeeeee------------eeeecc--------
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEM-QK-----MKYAFK------------CHRIKE-------- 62 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~-~~-----~~~~~~------------~~~~~~-------- 62 (162)
.+.+...+.+.+|.|||..+++|+.|+.+..|+.|.+... .+ .+..+. .+....
T Consensus 308 ~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~ 387 (519)
T KOG0293|consen 308 PSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARV 387 (519)
T ss_pred ccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhh
Confidence 3445667789999999999999999999999887654210 00 011110 000000
Q ss_pred --CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE---EcC-CCCEEEEecCCCeEEEE
Q psy1859 63 --DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL---FHQ-EYNTFATGGSDGYVNIW 136 (162)
Q Consensus 63 --~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~---~~~-~~~~l~~~~~d~~i~iw 136 (162)
.-.....+++++..|.+++++++--.+..+++||++..+.++.+.+|...-.-+ |-- +..++++|++|+.|+||
T Consensus 388 dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIW 467 (519)
T KOG0293|consen 388 DRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIW 467 (519)
T ss_pred hhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEE
Confidence 122344578999999999999999999999999999888888888887654444 544 56799999999999999
Q ss_pred eCCCceeeeeeccCCCceeEEEecCC
Q psy1859 137 DGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 137 d~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.++++++.++.+|...|++|+|+|.
T Consensus 468 hr~sgkll~~LsGHs~~vNcVswNP~ 493 (519)
T KOG0293|consen 468 HRISGKLLAVLSGHSKTVNCVSWNPA 493 (519)
T ss_pred EccCCceeEeecCCcceeeEEecCCC
Confidence 99999999999999999999999983
No 84
>KOG0313|consensus
Probab=99.82 E-value=4.6e-19 Score=117.19 Aligned_cols=141 Identities=12% Similarity=0.140 Sum_probs=114.8
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcc---------------------cceeeeeeeeeeeccCcccce
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPE---------------------MQKMKYAFKCHRIKEDGIEKI 68 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 68 (162)
..++..+.+++..+++..+++|+.|..+.||....... ...++.. ..+|.
T Consensus 190 ~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vt---------l~GHt 260 (423)
T KOG0313|consen 190 RGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVT---------LEGHT 260 (423)
T ss_pred cccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEE---------ecccc
Confidence 36778889999999999999999999999987221110 0011122 23567
Q ss_pred eceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce---ee
Q psy1859 69 YPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK---RL 144 (162)
Q Consensus 69 ~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~---~~ 144 (162)
++|.++.|++ ...+.+++.|.+|+.||+..+..+..+.. .....++ .+|..++|++|+.|..|++||.|++. ..
T Consensus 261 ~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~ 338 (423)
T KOG0313|consen 261 EPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVS 338 (423)
T ss_pred cceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeE
Confidence 7999999998 66888999999999999999988877754 5678888 99999999999999999999999764 46
Q ss_pred eeeccCCCceeEEEecC
Q psy1859 145 CQFHRYDTGITSLCFSY 161 (162)
Q Consensus 145 ~~~~~~~~~v~~v~~~p 161 (162)
+++.+|.+.|.++.|+|
T Consensus 339 ~s~~gH~nwVssvkwsp 355 (423)
T KOG0313|consen 339 QSLIGHKNWVSSVKWSP 355 (423)
T ss_pred EeeecchhhhhheecCC
Confidence 67889999999999998
No 85
>KOG1273|consensus
Probab=99.82 E-value=1.3e-18 Score=113.06 Aligned_cols=131 Identities=17% Similarity=0.269 Sum_probs=102.2
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
..|+.|++.|.++++|..+|.+.||+++... ....+.+|. .+|.+++||++|+.|++++.|..+.+|
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~----iar~lsaH~---------~pi~sl~WS~dgr~LltsS~D~si~lw 92 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR----IARMLSAHV---------RPITSLCWSRDGRKLLTSSRDWSIKLW 92 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccc----hhhhhhccc---------cceeEEEecCCCCEeeeecCCceeEEE
Confidence 5789999999999999999999998888643 333344444 389999999999999999999999999
Q ss_pred eCCCccceeeeeecccc-----------------------------------------------eeEE-EcCCCCEEEEe
Q psy1859 96 DGFNKKRLCQFHRYDTG-----------------------------------------------ITSL-FHQEYNTFATG 127 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~~-----------------------------------------------v~~~-~~~~~~~l~~~ 127 (162)
|+..|.+++++.- .++ ..+. |++.|+++++|
T Consensus 93 Dl~~gs~l~rirf-~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitG 171 (405)
T KOG1273|consen 93 DLLKGSPLKRIRF-DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITG 171 (405)
T ss_pred eccCCCceeEEEc-cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEe
Confidence 9998876654420 000 1112 55669999999
Q ss_pred cCCCeEEEEeCCCceeeeeeccCC-CceeEEEec
Q psy1859 128 GSDGYVNIWDGFNKKRLCQFHRYD-TGITSLCFS 160 (162)
Q Consensus 128 ~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~ 160 (162)
...|.+.++|..+.+++..++... ..|.++.|+
T Consensus 172 tsKGkllv~~a~t~e~vas~rits~~~IK~I~~s 205 (405)
T KOG1273|consen 172 TSKGKLLVYDAETLECVASFRITSVQAIKQIIVS 205 (405)
T ss_pred cCcceEEEEecchheeeeeeeechheeeeEEEEe
Confidence 999999999999998887776444 566666664
No 86
>KOG0643|consensus
Probab=99.81 E-value=3.4e-18 Score=108.77 Aligned_cols=139 Identities=19% Similarity=0.200 Sum_probs=113.6
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC-
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS- 88 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~- 88 (162)
..+.+.|.|+...-+.+.+++|+.|.+++||+ .++ .+.+..++... +|..+.|+++|++++.+..
T Consensus 49 ~GHtGavW~~Did~~s~~liTGSAD~t~kLWD--v~t--Gk~la~~k~~~----------~Vk~~~F~~~gn~~l~~tD~ 114 (327)
T KOG0643|consen 49 DGHTGAVWCCDIDWDSKHLITGSADQTAKLWD--VET--GKQLATWKTNS----------PVKRVDFSFGGNLILASTDK 114 (327)
T ss_pred cCCCceEEEEEecCCcceeeeccccceeEEEE--cCC--CcEEEEeecCC----------eeEEEeeccCCcEEEEEehh
Confidence 34566778888888899999999999999955 444 44555544433 6999999999988887754
Q ss_pred ----CCeEEEEeCCC-------ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce-eeeeeccCCCcee
Q psy1859 89 ----DGYVNIWDGFN-------KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGIT 155 (162)
Q Consensus 89 ----d~~v~~wd~~~-------~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~ 155 (162)
.+.|.++|++. .+++..+..+.+.++.+ |.|-++++++|..||.|.+||+++++ .+..-+.|...|+
T Consensus 115 ~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~In 194 (327)
T KOG0643|consen 115 QMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKIN 194 (327)
T ss_pred hcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccc
Confidence 37899999983 35677888888889999 99999999999999999999999985 4555678999999
Q ss_pred EEEecCC
Q psy1859 156 SLCFSYD 162 (162)
Q Consensus 156 ~v~~~pd 162 (162)
+++|+||
T Consensus 195 d~q~s~d 201 (327)
T KOG0643|consen 195 DLQFSRD 201 (327)
T ss_pred cccccCC
Confidence 9999987
No 87
>KOG0289|consensus
Probab=99.81 E-value=1.2e-18 Score=117.10 Aligned_cols=144 Identities=22% Similarity=0.247 Sum_probs=116.9
Q ss_pred eeeeccccccEEE---EEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCE
Q psy1859 6 QRRESSLKFQTRC---IKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNT 82 (162)
Q Consensus 6 ~~~~~~~~~~~~~---i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 82 (162)
.+....++||... +.++|+...+++++.|..|+||..-..+ ....... |..+|+.+..+|.|.+
T Consensus 251 ~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s----~~~~~~~---------h~~~V~~ls~h~tgeY 317 (506)
T KOG0289|consen 251 NQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS----EPTSSRP---------HEEPVTGLSLHPTGEY 317 (506)
T ss_pred hhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc----Ccccccc---------ccccceeeeeccCCcE
Confidence 3444556676644 5578888889999999999997554432 2222233 4448999999999999
Q ss_pred EEEecCCCeEEEEeCCCccceeeeeec--ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEe
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLCQFHRY--DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~~~~~~--~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 159 (162)
|++++.|+.+...|++++..+...... .-.+++. |||||.+|.+|..|+.++|||++++..+..|.+|.++|..|+|
T Consensus 318 llsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~F 397 (506)
T KOG0289|consen 318 LLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISF 397 (506)
T ss_pred EEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEe
Confidence 999999999999999999887766542 2347777 9999999999999999999999999999999999999999999
Q ss_pred cCC
Q psy1859 160 SYD 162 (162)
Q Consensus 160 ~pd 162 (162)
+.+
T Consensus 398 sEN 400 (506)
T KOG0289|consen 398 SEN 400 (506)
T ss_pred ccC
Confidence 864
No 88
>KOG0310|consensus
Probab=99.81 E-value=3.3e-18 Score=116.12 Aligned_cols=142 Identities=20% Similarity=0.239 Sum_probs=116.1
Q ss_pred eeeeccccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE
Q psy1859 6 QRRESSLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA 84 (162)
Q Consensus 6 ~~~~~~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~ 84 (162)
+.-.+.++..++|.+|+|. +..+++|+.||.|++|+....+ ..+.++. |..+|..+.+-|.|.+++
T Consensus 146 ~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~---~~v~eln----------hg~pVe~vl~lpsgs~ia 212 (487)
T KOG0310|consen 146 QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT---SRVVELN----------HGCPVESVLALPSGSLIA 212 (487)
T ss_pred EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC---ceeEEec----------CCCceeeEEEcCCCCEEE
Confidence 3345677888999999995 5588999999999997665442 3333332 444899999999999998
Q ss_pred EecCCCeEEEEeCCC-ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 85 TGGSDGYVNIWDGFN-KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+++ ...+++||+-+ ++.+..+..|...|+|+ +..++..|++++-|+.+++||+.+-+.+..+. .+++|.+++.+||
T Consensus 213 sAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~d 290 (487)
T KOG0310|consen 213 SAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPD 290 (487)
T ss_pred EcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee-cccceeeEEecCC
Confidence 886 45799999996 45666666799999999 98899999999999999999998888888886 6779999999985
No 89
>KOG2394|consensus
Probab=99.81 E-value=1.1e-18 Score=120.05 Aligned_cols=148 Identities=18% Similarity=0.254 Sum_probs=112.8
Q ss_pred ccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeee-------eeeeeeecc--------CcccceeceEEEEec
Q psy1859 14 FQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKY-------AFKCHRIKE--------DGIEKIYPVNAISFH 77 (162)
Q Consensus 14 ~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~-------~~~~~~~~~--------~~~~~~~~v~~~~~~ 77 (162)
..++|+.|-|. ...|+++-.+|.+.+++.....+.....+ .+..+.... ...--...|..++|+
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS 299 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFS 299 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEc
Confidence 56789999995 45667778889999865422111000000 011111000 001112278899999
Q ss_pred CCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeE
Q psy1859 78 QEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS 156 (162)
Q Consensus 78 p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 156 (162)
|||++||+.+.||.++|||..+.+++..++.+-+...|+ |||||+|+++|++|-.|.||.+..++.+.+-++|++.|..
T Consensus 300 ~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~ 379 (636)
T KOG2394|consen 300 PDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSV 379 (636)
T ss_pred CCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceee
Confidence 999999999999999999999988888887788889999 9999999999999999999999999999999999999999
Q ss_pred EEecC
Q psy1859 157 LCFSY 161 (162)
Q Consensus 157 v~~~p 161 (162)
|+|.|
T Consensus 380 VaFDp 384 (636)
T KOG2394|consen 380 VAFDP 384 (636)
T ss_pred Eeecc
Confidence 99986
No 90
>KOG0305|consensus
Probab=99.81 E-value=2.9e-18 Score=119.17 Aligned_cols=137 Identities=17% Similarity=0.258 Sum_probs=113.9
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEec--C
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGG--S 88 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~--~ 88 (162)
+...+..+.|+++++++++|+.|+.+.||+. .. ....+.+..|.. +|.+++|+|.. .+||+|+ .
T Consensus 300 H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~--~~--~~p~~~~~~H~a---------AVKA~awcP~q~~lLAsGGGs~ 366 (484)
T KOG0305|consen 300 HRQEVCGLKWSPDGNQLASGGNDNVVFIWDG--LS--PEPKFTFTEHTA---------AVKALAWCPWQSGLLATGGGSA 366 (484)
T ss_pred ccceeeeeEECCCCCeeccCCCccceEeccC--CC--ccccEEEeccce---------eeeEeeeCCCccCceEEcCCCc
Confidence 4445566889999999999999999999665 33 445555555554 89999999976 7888864 7
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEe--cCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATG--GSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+.|++||..+++.+..+. ....|..+ |++..+.++++ ..++.|.||+..+.+.+..+.+|...|..++++||
T Consensus 367 D~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPd 442 (484)
T KOG0305|consen 367 DRCIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPD 442 (484)
T ss_pred ccEEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCC
Confidence 9999999999998888775 56889999 99988766665 35679999999999999999999999999999997
No 91
>KOG1274|consensus
Probab=99.81 E-value=2.4e-18 Score=124.37 Aligned_cols=149 Identities=11% Similarity=0.165 Sum_probs=112.1
Q ss_pred ceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE
Q psy1859 5 MQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA 84 (162)
Q Consensus 5 ~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~ 84 (162)
.++....+++++.++.++|++++|++.+.||.|.+|+++... ...++.+-.. .++......+.-++|+|++..|+
T Consensus 130 ~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~----~~~tl~~v~k-~n~~~~s~i~~~~aW~Pk~g~la 204 (933)
T KOG1274|consen 130 QEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGI----LSKTLTGVDK-DNEFILSRICTRLAWHPKGGTLA 204 (933)
T ss_pred hheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccch----hhhhcccCCc-cccccccceeeeeeecCCCCeEE
Confidence 345567789999999999999999999999999997776432 2222222110 01111233688999999998888
Q ss_pred EecCCCeEEEEeCCCccceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 85 TGGSDGYVNIWDGFNKKRLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~~~~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
....|+.|.+|+...+.....+.. +...+..+ |+|+|+|+|+++-||.|.|||+.+-. + ......|++++|-|
T Consensus 205 ~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~---~-~~~~~~Vc~~aw~p 280 (933)
T KOG1274|consen 205 VPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHE---R-HEFKRAVCCEAWKP 280 (933)
T ss_pred eeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccch---h-ccccceeEEEecCC
Confidence 888999999999999988777753 33447777 99999999999999999999998611 1 23345788888877
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
+
T Consensus 281 ~ 281 (933)
T KOG1274|consen 281 N 281 (933)
T ss_pred C
Confidence 5
No 92
>KOG0282|consensus
Probab=99.81 E-value=1.7e-19 Score=122.30 Aligned_cols=120 Identities=21% Similarity=0.302 Sum_probs=103.0
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~ 90 (162)
+...|+.++|+.+|..|++++.|+.+++ ||.++ .+....+.... .++++.|+|++ +.|++|+.|+
T Consensus 257 H~k~Vrd~~~s~~g~~fLS~sfD~~lKl--wDtET--G~~~~~f~~~~----------~~~cvkf~pd~~n~fl~G~sd~ 322 (503)
T KOG0282|consen 257 HRKPVRDASFNNCGTSFLSASFDRFLKL--WDTET--GQVLSRFHLDK----------VPTCVKFHPDNQNIFLVGGSDK 322 (503)
T ss_pred chhhhhhhhccccCCeeeeeecceeeee--ecccc--ceEEEEEecCC----------CceeeecCCCCCcEEEEecCCC
Confidence 4455677899999999999999999999 55544 44444444333 58999999998 9999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeee
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLC 145 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 145 (162)
.|+.||+++++.++++..|-+.+..+ |-++|++++++++|++++||+.+.+-.+.
T Consensus 323 ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik 378 (503)
T KOG0282|consen 323 KIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIK 378 (503)
T ss_pred cEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccch
Confidence 99999999999999999999999999 99999999999999999999998775544
No 93
>KOG0300|consensus
Probab=99.80 E-value=1.8e-19 Score=117.38 Aligned_cols=153 Identities=16% Similarity=0.128 Sum_probs=121.1
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecC----Ccccc--------eeee------------eeeeeeec---c
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDT----GPEMQ--------KMKY------------AFKCHRIK---E 62 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~----~~~~~--------~~~~------------~~~~~~~~---~ 62 (162)
..+.+.+.+|.|++.+..+++++.|++..||.+.. .++.. +... ...+|... .
T Consensus 187 ~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~ 266 (481)
T KOG0300|consen 187 TGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLM 266 (481)
T ss_pred cccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeee
Confidence 44567778999999999999999999999987321 11000 0000 00000000 0
Q ss_pred CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 63 DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 63 ~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
...+|.+.|.+..|-..|+.+++++.|.+-.+||++++.++..+.+|....+.+ -+|..+++++++.|.+.++||++..
T Consensus 267 ~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRea 346 (481)
T KOG0300|consen 267 RLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREA 346 (481)
T ss_pred eeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhh
Confidence 235577899999999999999999999999999999999999999999999999 9999999999999999999999843
Q ss_pred -eeeeeeccCCCceeEEEecCC
Q psy1859 142 -KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 142 -~~~~~~~~~~~~v~~v~~~pd 162 (162)
..+..|++|...|+++.|..|
T Consensus 347 I~sV~VFQGHtdtVTS~vF~~d 368 (481)
T KOG0300|consen 347 IQSVAVFQGHTDTVTSVVFNTD 368 (481)
T ss_pred cceeeeecccccceeEEEEecC
Confidence 357889999999999999764
No 94
>KOG0283|consensus
Probab=99.80 E-value=1.3e-18 Score=124.37 Aligned_cols=131 Identities=20% Similarity=0.193 Sum_probs=102.7
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYV 92 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v 92 (162)
+.|..|+|+.+ ++|++++-|.+|+||.....+ .-..+. |.+.|+|++|+|-. ++|++|+-|+.+
T Consensus 370 ~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~--CL~~F~------------HndfVTcVaFnPvDDryFiSGSLD~Kv 434 (712)
T KOG0283|consen 370 ADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKE--CLKVFS------------HNDFVTCVAFNPVDDRYFISGSLDGKV 434 (712)
T ss_pred hhheecccccC-CeeEeccccccEEeecCCCcc--eeeEEe------------cCCeeEEEEecccCCCcEeecccccce
Confidence 34466889985 578999999999997665433 334443 44489999999965 999999999999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec---------cCCCceeEEEecC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH---------RYDTGITSLCFSY 161 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~~~v~~v~~~p 161 (162)
+||++...+.+.-. ....-|+++ |.|||++.+.|+.+|..++|+....+.+.... .|. .|+.+.|.|
T Consensus 435 RiWsI~d~~Vv~W~-Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p 511 (712)
T KOG0283|consen 435 RLWSISDKKVVDWN-DLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFP 511 (712)
T ss_pred EEeecCcCeeEeeh-hhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecC
Confidence 99999876554433 344789999 99999999999999999999998777654432 233 799999986
No 95
>KOG1446|consensus
Probab=99.80 E-value=9.2e-18 Score=108.61 Aligned_cols=148 Identities=19% Similarity=0.106 Sum_probs=109.0
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeee----------eee----------------------
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFK----------CHR---------------------- 59 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~----------~~~---------------------- 59 (162)
..+++.++.|+++|..+++++.|..++||+. .+++.......+ -|.
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~--~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dN 90 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDS--LSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDN 90 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEc--CCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecC
Confidence 6788999999999999999999999999553 332221111100 000
Q ss_pred -eccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeC
Q psy1859 60 -IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 60 -~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
-.+-..+|...|.++..+|.+..+++++.|++|++||++..++.-.+.....++.+ |+|+|-++|++.....|++||+
T Consensus 91 kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~A-fDp~GLifA~~~~~~~IkLyD~ 169 (311)
T KOG1446|consen 91 KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAA-FDPEGLIFALANGSELIKLYDL 169 (311)
T ss_pred ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCccee-ECCCCcEEEEecCCCeEEEEEe
Confidence 00134678889999999999999999999999999999987776665544333322 8999999999998889999999
Q ss_pred CCc--eeeeeec---cCCCceeEEEecCC
Q psy1859 139 FNK--KRLCQFH---RYDTGITSLCFSYD 162 (162)
Q Consensus 139 ~~~--~~~~~~~---~~~~~v~~v~~~pd 162 (162)
|.- .+..++. ......+.+.||||
T Consensus 170 Rs~dkgPF~tf~i~~~~~~ew~~l~FS~d 198 (311)
T KOG1446|consen 170 RSFDKGPFTTFSITDNDEAEWTDLEFSPD 198 (311)
T ss_pred cccCCCCceeEccCCCCccceeeeEEcCC
Confidence 854 2333332 33557889999997
No 96
>KOG0303|consensus
Probab=99.80 E-value=8.5e-19 Score=116.67 Aligned_cols=133 Identities=17% Similarity=0.149 Sum_probs=110.1
Q ss_pred ccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcc---cceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEE
Q psy1859 10 SSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPE---MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFA 84 (162)
Q Consensus 10 ~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~ 84 (162)
..+++++..++|+| +...+++|+.|.+|.||.+-.... ....+..+.+|.. .|.-++|||.. +.|+
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~r---------rVg~V~wHPtA~NVLl 148 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQR---------RVGLVQWHPTAPNVLL 148 (472)
T ss_pred cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecce---------eEEEEeecccchhhHh
Confidence 34567778899999 566788999999999987643321 1223445566554 79999999986 8899
Q ss_pred EecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCC
Q psy1859 85 TGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT 152 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 152 (162)
+++.|..|.+||+.+++.+..+. |...|.++ |+.||.+++|.+.|..|+|||.++++.+..-.+|.+
T Consensus 149 sag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG 216 (472)
T KOG0303|consen 149 SAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEG 216 (472)
T ss_pred hccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccC
Confidence 99999999999999999888887 89999999 999999999999999999999999998887766765
No 97
>KOG0267|consensus
Probab=99.80 E-value=1.5e-19 Score=127.79 Aligned_cols=137 Identities=23% Similarity=0.312 Sum_probs=120.2
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
...+..+.|+|.+.+++.|+.|+..++| |... ..+.+.+++|.. .|..++|+|+|++++.++.|..+
T Consensus 112 ~~~~~sv~f~P~~~~~a~gStdtd~~iw--D~Rk--~Gc~~~~~s~~~---------vv~~l~lsP~Gr~v~~g~ed~tv 178 (825)
T KOG0267|consen 112 LLNITSVDFHPYGEFFASGSTDTDLKIW--DIRK--KGCSHTYKSHTR---------VVDVLRLSPDGRWVASGGEDNTV 178 (825)
T ss_pred ccCcceeeeccceEEeccccccccceeh--hhhc--cCceeeecCCcc---------eeEEEeecCCCceeeccCCccee
Confidence 3445678899999999999999999994 5443 445666666544 79999999999999999999999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++||+..|+.+..|..|...+..+ |+|..-++++|+.|+++++||+++...+.........|.+..|+||
T Consensus 179 ki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~ 249 (825)
T KOG0267|consen 179 KIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPD 249 (825)
T ss_pred eeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCC
Confidence 999999999999999999999999 9999999999999999999999988888877777889999999986
No 98
>KOG1332|consensus
Probab=99.80 E-value=4.5e-19 Score=111.43 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=116.4
Q ss_pred cceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccc-eeeeeeeeeeeccCcccceeceEEEEe-cC-CC
Q psy1859 4 IMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQ-KMKYAFKCHRIKEDGIEKIYPVNAISF-HQ-EY 80 (162)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~-~p-~~ 80 (162)
+++++...++..|..+...-.|++|++++.|++|+|+....+. . ....++.+|.. +|..++| +| .|
T Consensus 2 ~~q~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~--~s~ll~~L~Gh~G---------PVwqv~wahPk~G 70 (299)
T KOG1332|consen 2 VMQTIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNG--QSKLLAELTGHSG---------PVWKVAWAHPKFG 70 (299)
T ss_pred cceehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCC--CceeeeEecCCCC---------CeeEEeecccccC
Confidence 4566777777777777777779999999999999995444332 3 55666677665 8999999 55 57
Q ss_pred CEEEEecCCCeEEEEeCCCccc--eeeeeecccceeEE-EcC--CCCEEEEecCCCeEEEEeCCCc-e--eeeeeccCCC
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKR--LCQFHRYDTGITSL-FHQ--EYNTFATGGSDGYVNIWDGFNK-K--RLCQFHRYDT 152 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~--~~~~~~~~~~v~~~-~~~--~~~~l~~~~~d~~i~iwd~~~~-~--~~~~~~~~~~ 152 (162)
.+|++++.||.|.||.-.+++. ......|...++++ |.| -|-.|+.++.||.|.|.+.++. . .......|+-
T Consensus 71 ~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~ 150 (299)
T KOG1332|consen 71 TILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEI 150 (299)
T ss_pred cEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcccc
Confidence 9999999999999999888743 44666889999999 888 5678999999999999998754 1 2233457999
Q ss_pred ceeEEEecC
Q psy1859 153 GITSLCFSY 161 (162)
Q Consensus 153 ~v~~v~~~p 161 (162)
.|++++|+|
T Consensus 151 GvnsVswap 159 (299)
T KOG1332|consen 151 GVNSVSWAP 159 (299)
T ss_pred ccceeeecC
Confidence 999999998
No 99
>KOG0316|consensus
Probab=99.80 E-value=2.7e-18 Score=107.61 Aligned_cols=137 Identities=20% Similarity=0.290 Sum_probs=113.6
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.+.+...+..++.+.|...|++|+.|..+.+|+.+ + .+....+.+|.. .|..++|+.+...+++|+.
T Consensus 55 YsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~--T--Gkv~Rr~rgH~a---------qVNtV~fNeesSVv~Sgsf 121 (307)
T KOG0316|consen 55 YSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN--T--GKVDRRFRGHLA---------QVNTVRFNEESSVVASGSF 121 (307)
T ss_pred ecCCCceeeeccccccccccccCCCCceEEEEEcc--c--Ceeeeecccccc---------eeeEEEecCcceEEEeccc
Confidence 44555667778888899999999999999995544 4 566667777655 7999999999999999999
Q ss_pred CCeEEEEeCCCc--cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNK--KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~--~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|..+++||-++. ++++.+......|.++ .+ +..+++|+-||+++.||++.|+...-+- ..+|++++|++|
T Consensus 122 D~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy~--g~pit~vs~s~d 194 (307)
T KOG0316|consen 122 DSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDYF--GHPITSVSFSKD 194 (307)
T ss_pred cceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhhc--CCcceeEEecCC
Confidence 999999999874 6788888777888887 64 5679999999999999999998776554 447999999986
No 100
>KOG0274|consensus
Probab=99.80 E-value=7.4e-18 Score=120.12 Aligned_cols=135 Identities=16% Similarity=0.173 Sum_probs=116.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+.+.+.++++...+..+++|+.|.++++|+ ..+ ......+.+|.. .|.++...+ ..+++|+.|
T Consensus 246 ~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd--~~s--g~C~~~l~gh~s---------tv~~~~~~~--~~~~sgs~D 310 (537)
T KOG0274|consen 246 VGHFGGVWGLAFPSGGDKLVSGSTDKTERVWD--CST--GECTHSLQGHTS---------SVRCLTIDP--FLLVSGSRD 310 (537)
T ss_pred cCCCCCceeEEEecCCCEEEEEecCCcEEeEe--cCC--CcEEEEecCCCc---------eEEEEEccC--ceEeeccCC
Confidence 44556677888887788999999999999966 444 566667777765 688887644 678889999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.+|++|++.++..+..+.+|..+|.++ .+ +.++++|+.|++|++||+.+++++..+.+|...|+++.+.+
T Consensus 311 ~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~ 381 (537)
T KOG0274|consen 311 NTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDS 381 (537)
T ss_pred ceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecC
Confidence 999999999999999999999999999 76 88999999999999999999999999999999999998765
No 101
>KOG0294|consensus
Probab=99.80 E-value=4.5e-18 Score=110.30 Aligned_cols=134 Identities=14% Similarity=0.128 Sum_probs=104.8
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC--CEEEEecCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY--NTFATGGSD 89 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~l~~~~~d 89 (162)
+.+.+++++++ +.++++|+.|-+|+|| |..+ ......+.. |.+.|+++.|.+.- ..|++|+.|
T Consensus 42 H~~sitavAVs--~~~~aSGssDetI~IY--Dm~k--~~qlg~ll~---------HagsitaL~F~~~~S~shLlS~sdD 106 (362)
T KOG0294|consen 42 HAGSITALAVS--GPYVASGSSDETIHIY--DMRK--RKQLGILLS---------HAGSITALKFYPPLSKSHLLSGSDD 106 (362)
T ss_pred cccceeEEEec--ceeEeccCCCCcEEEE--eccc--hhhhcceec---------cccceEEEEecCCcchhheeeecCC
Confidence 44566677765 8999999999999995 4433 233333333 44589999998865 389999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
|.|.+|+...+.++..++.|.+.|+.+ .+|.+++-++.+.|+.++.||+-.|+.-..+.. ...-+.|.|+|
T Consensus 107 G~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-~~~at~v~w~~ 178 (362)
T KOG0294|consen 107 GHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNL-KNKATLVSWSP 178 (362)
T ss_pred CcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeecc-CCcceeeEEcC
Confidence 999999999999999999999999999 999999999999999999999988875433331 11234477776
No 102
>KOG0269|consensus
Probab=99.79 E-value=4.6e-19 Score=126.10 Aligned_cols=135 Identities=23% Similarity=0.298 Sum_probs=111.8
Q ss_pred EEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEEEE
Q psy1859 18 CIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIW 95 (162)
Q Consensus 18 ~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~w 95 (162)
.+.|+. +.++|++++..|.|.+|+++... ..+....|..|.. .+.++.|++.. ++|++|+.||.|++|
T Consensus 92 DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~-rnk~l~~f~EH~R---------s~~~ldfh~tep~iliSGSQDg~vK~~ 161 (839)
T KOG0269|consen 92 DVKWGQLYSNLIATCSTNGVISVWDLNKSI-RNKLLTVFNEHER---------SANKLDFHSTEPNILISGSQDGTVKCW 161 (839)
T ss_pred hcccccchhhhheeecCCCcEEEEecCccc-cchhhhHhhhhcc---------ceeeeeeccCCccEEEecCCCceEEEE
Confidence 366774 46789999999999997776532 1223334455544 79999999976 899999999999999
Q ss_pred eCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCce-eeeeeccCCCceeEEEecCC
Q psy1859 96 DGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~pd 162 (162)
|++..+-..++.+....|.++ |+| .+.+++++.+.|.+.+||+|... +...+.+|.++|.++.|+|+
T Consensus 162 DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPn 231 (839)
T KOG0269|consen 162 DLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPN 231 (839)
T ss_pred eeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCC
Confidence 999988888888888899999 999 77899999999999999998754 57778899999999999996
No 103
>KOG0641|consensus
Probab=99.79 E-value=2.3e-17 Score=103.19 Aligned_cols=147 Identities=12% Similarity=0.044 Sum_probs=112.8
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.+.+.+||.++- +=++-.+++|+.|.+|++|++.....-...-..+.... -....|.+++..|.|++|++|..
T Consensus 179 ~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~g------lessavaav~vdpsgrll~sg~~ 251 (350)
T KOG0641|consen 179 LSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGG------LESSAVAAVAVDPSGRLLASGHA 251 (350)
T ss_pred ecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCC------cccceeEEEEECCCcceeeeccC
Confidence 455667776643 23478899999999999988876541111111111111 12247999999999999999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc----eeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK----KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~v~~~pd 162 (162)
|....+||++.+++++.+..|...|.++ |+|...|+.+++.|..|++=|+... -++.+...|.+.+-.+.|+|.
T Consensus 252 dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~ 330 (350)
T KOG0641|consen 252 DSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQ 330 (350)
T ss_pred CCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCc
Confidence 9999999999999999999999999999 9999999999999999999998532 123344568888888899874
No 104
>KOG0278|consensus
Probab=99.79 E-value=6.1e-18 Score=106.88 Aligned_cols=132 Identities=17% Similarity=0.200 Sum_probs=102.5
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc---------------------------
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE--------------------------- 62 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 62 (162)
+...+.|+.+.|....+.+++++.|++|++|+....+ ....+.++.+....
T Consensus 140 ~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt--~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~ 217 (334)
T KOG0278|consen 140 SGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGT--EVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGL 217 (334)
T ss_pred cCCCCcceeEEEeccCceEEeeccCCceEEEEeccCc--EEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccc
Confidence 4456778889999988889999999999997754332 22222211111000
Q ss_pred -CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeee-eecccceeEE-EcCCCCEEEEecCCCeEEEEeCC
Q psy1859 63 -DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQF-HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 63 -~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~ 139 (162)
+..+.+..|.+..++|+...+++|+.|..++.||..++..+..+ ++|.++|.++ |+|+|...++|++||+|++|...
T Consensus 218 lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 218 LKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred eeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence 22334556888999999999999999999999999999888876 7899999999 99999999999999999999987
Q ss_pred Ccee
Q psy1859 140 NKKR 143 (162)
Q Consensus 140 ~~~~ 143 (162)
.++.
T Consensus 298 ~~~~ 301 (334)
T KOG0278|consen 298 PGKT 301 (334)
T ss_pred CCCc
Confidence 6553
No 105
>KOG0265|consensus
Probab=99.79 E-value=7.3e-18 Score=108.63 Aligned_cols=137 Identities=14% Similarity=0.211 Sum_probs=115.1
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
+.+++++.|.-++..+.+|+-|+.|++|+ ..+ ....+.+.+|.. +|+.+..+|+|..+++-+.|..+
T Consensus 174 kyqltAv~f~d~s~qv~sggIdn~ikvWd--~r~--~d~~~~lsGh~D---------tIt~lsls~~gs~llsnsMd~tv 240 (338)
T KOG0265|consen 174 KYQLTAVGFKDTSDQVISGGIDNDIKVWD--LRK--NDGLYTLSGHAD---------TITGLSLSRYGSFLLSNSMDNTV 240 (338)
T ss_pred ceeEEEEEecccccceeeccccCceeeec--ccc--CcceEEeecccC---------ceeeEEeccCCCccccccccceE
Confidence 67889999999999999999999999955 433 445666677765 79999999999999999999999
Q ss_pred EEEeCCCc----cceeeeeec--cccee--EE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 93 NIWDGFNK----KRLCQFHRY--DTGIT--SL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~----~~~~~~~~~--~~~v~--~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++||++.. +++..+.++ .-..+ .+ |+|+++++-+|+.|..+++||......+..+.+|.+.|.++.|+|.
T Consensus 241 rvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~ 319 (338)
T KOG0265|consen 241 RVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPT 319 (338)
T ss_pred EEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCC
Confidence 99999864 235555443 22333 44 9999999999999999999999888899999999999999999984
No 106
>KOG2096|consensus
Probab=99.78 E-value=4.9e-18 Score=110.59 Aligned_cols=151 Identities=11% Similarity=0.088 Sum_probs=111.1
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccc-------------e-------------------eeeeeeee
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQ-------------K-------------------MKYAFKCH 58 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~-------------~-------------------~~~~~~~~ 58 (162)
.+++.+++++|+.||++|++++.|+.|+||+.+.-.... + .+..++..
T Consensus 84 gH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~ 163 (420)
T KOG2096|consen 84 GHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLV 163 (420)
T ss_pred ccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEee
Confidence 345678999999999999999999999998864322100 0 00000000
Q ss_pred eec--------------cCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCE
Q psy1859 59 RIK--------------EDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNT 123 (162)
Q Consensus 59 ~~~--------------~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~ 123 (162)
... +....|...+..+-....+.+|++++.|..|.+|+++ |+.+..+......-+.. .||+|++
T Consensus 164 K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRF 242 (420)
T KOG2096|consen 164 KKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRF 242 (420)
T ss_pred ecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcE
Confidence 000 0334466677777777777899999999999999998 88888887666666666 9999999
Q ss_pred EEEecCCCeEEEEeCC---Cce-----eeeeeccCCCceeEEEecCC
Q psy1859 124 FATGGSDGYVNIWDGF---NKK-----RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 124 l~~~~~d~~i~iwd~~---~~~-----~~~~~~~~~~~v~~v~~~pd 162 (162)
+++++.-..+++|.+- .|. .+-.+.+|.+.|...+|+|+
T Consensus 243 ia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~ 289 (420)
T KOG2096|consen 243 IAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNS 289 (420)
T ss_pred EEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCC
Confidence 9999999999999864 221 34456799999999999986
No 107
>KOG0278|consensus
Probab=99.78 E-value=1.6e-18 Score=109.46 Aligned_cols=136 Identities=15% Similarity=0.190 Sum_probs=105.1
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
--+++++|+.|.++|++|+.+..++| ++.++.+.. ...+.+|+ ..|..+-|....+.|++++.|+.|+
T Consensus 101 hivk~~af~~ds~~lltgg~ekllrv--fdln~p~Ap-p~E~~ght---------g~Ir~v~wc~eD~~iLSSadd~tVR 168 (334)
T KOG0278|consen 101 HIVKAVAFSQDSNYLLTGGQEKLLRV--FDLNRPKAP-PKEISGHT---------GGIRTVLWCHEDKCILSSADDKTVR 168 (334)
T ss_pred heeeeEEecccchhhhccchHHHhhh--hhccCCCCC-chhhcCCC---------CcceeEEEeccCceEEeeccCCceE
Confidence 34588999999999999999999999 444432222 22334444 4899999999889999999999999
Q ss_pred EEeCCCccceeeeeeccc----------------------------------------ceeEE-EcCCCCEEEEecCCCe
Q psy1859 94 IWDGFNKKRLCQFHRYDT----------------------------------------GITSL-FHQEYNTFATGGSDGY 132 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~----------------------------------------~v~~~-~~~~~~~l~~~~~d~~ 132 (162)
+||.++++.++.+.- .. .|.+. .+|+...++.|+.|..
T Consensus 169 LWD~rTgt~v~sL~~-~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~ 247 (334)
T KOG0278|consen 169 LWDHRTGTEVQSLEF-NSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFK 247 (334)
T ss_pred EEEeccCcEEEEEec-CCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceE
Confidence 999999876665521 11 23344 6677778888888888
Q ss_pred EEEEeCCCceeeeee-ccCCCceeEEEecCC
Q psy1859 133 VNIWDGFNKKRLCQF-HRYDTGITSLCFSYD 162 (162)
Q Consensus 133 i~iwd~~~~~~~~~~-~~~~~~v~~v~~~pd 162 (162)
++.||..++..+..+ ++|.++|.|+.|+||
T Consensus 248 ~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPd 278 (334)
T KOG0278|consen 248 VYKFDYNTGEEIGSYNKGHFGPVHCVRFSPD 278 (334)
T ss_pred EEEEeccCCceeeecccCCCCceEEEEECCC
Confidence 888888888877765 789999999999997
No 108
>KOG0288|consensus
Probab=99.78 E-value=1.2e-17 Score=111.71 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=102.9
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc-------------------------------
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE------------------------------- 62 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 62 (162)
+.+..+.+.++++.+++++.|+.+++|+.+.. +...++.+|....
T Consensus 220 g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~----r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C 295 (459)
T KOG0288|consen 220 GNITSIDFDSDNKHVIAASNDKNLRLWNVDSL----RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYC 295 (459)
T ss_pred CCcceeeecCCCceEEeecCCCceeeeeccch----hhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhhe
Confidence 44889999999999999999999999876542 2222333332211
Q ss_pred ----------------------------------------CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccc
Q psy1859 63 ----------------------------------------DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKR 102 (162)
Q Consensus 63 ----------------------------------------~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~ 102 (162)
......+.|+++..++++..+++++.|..+.+.|+++...
T Consensus 296 ~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI 375 (459)
T KOG0288|consen 296 SKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEI 375 (459)
T ss_pred eccccccccccceEecceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccE
Confidence 0111222667777777777777777777777777776554
Q ss_pred eeeeeec----ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCC--ceeEEEecC
Q psy1859 103 LCQFHRY----DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT--GITSLCFSY 161 (162)
Q Consensus 103 ~~~~~~~----~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~v~~~p 161 (162)
...+... ....+.+ |||++.|+++|+.||.|+||++.++++...+....+ .|++++|+|
T Consensus 376 ~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~ 441 (459)
T KOG0288|consen 376 RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNP 441 (459)
T ss_pred EEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcC
Confidence 4444321 2346667 999999999999999999999999999888765443 599999987
No 109
>KOG2445|consensus
Probab=99.78 E-value=2.6e-17 Score=106.53 Aligned_cols=150 Identities=13% Similarity=0.126 Sum_probs=112.8
Q ss_pred ccceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEe-cCC-C
Q psy1859 3 YIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISF-HQE-Y 80 (162)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~p~-~ 80 (162)
..++.+.+.++.-+.++.|.+.|+++++|+.|++++||+++..++.......-+.| .+.|-.+.| +|. |
T Consensus 3 ~s~~pi~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah---------~~Si~rV~WAhPEfG 73 (361)
T KOG2445|consen 3 FSMAPIDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAH---------DGSIWRVVWAHPEFG 73 (361)
T ss_pred ccccccccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEec---------CCcEEEEEecCcccc
Confidence 34556677788889999999999999999999999998876555444444444444 447999999 443 6
Q ss_pred CEEEEecCCCeEEEEeCCC---------ccceeeeeecccceeEE-EcC--CCCEEEEecCCCeEEEEeCCCcee-----
Q psy1859 81 NTFATGGSDGYVNIWDGFN---------KKRLCQFHRYDTGITSL-FHQ--EYNTFATGGSDGYVNIWDGFNKKR----- 143 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~---------~~~~~~~~~~~~~v~~~-~~~--~~~~l~~~~~d~~i~iwd~~~~~~----- 143 (162)
+.+++++.|+.+.||.-.. .....++....+.++++ |.| -|-.|++++.||.+|||+.-....
T Consensus 74 qvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~ 153 (361)
T KOG2445|consen 74 QVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWT 153 (361)
T ss_pred ceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccch
Confidence 9999999999999997521 22344666778899999 999 677899999999999998754322
Q ss_pred -eeeec-------cCCCceeEEEecC
Q psy1859 144 -LCQFH-------RYDTGITSLCFSY 161 (162)
Q Consensus 144 -~~~~~-------~~~~~v~~v~~~p 161 (162)
.+.++ .+..+..|+.|+|
T Consensus 154 Lq~Ei~~~~~pp~~~~~~~~CvsWn~ 179 (361)
T KOG2445|consen 154 LQHEIQNVIDPPGKNKQPCFCVSWNP 179 (361)
T ss_pred hhhhhhhccCCcccccCcceEEeecc
Confidence 22222 3555778888876
No 110
>KOG4283|consensus
Probab=99.78 E-value=1.8e-17 Score=107.03 Aligned_cols=141 Identities=17% Similarity=0.208 Sum_probs=110.8
Q ss_pred eeccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC---CEE
Q psy1859 8 RESSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY---NTF 83 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~l 83 (162)
.+..+++.|..+.|-| |...|.+++.|.++++|+.+ + .+....|+... .|.+-+|+|-. .++
T Consensus 96 h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtn--T--lQ~a~~F~me~----------~VYshamSp~a~sHcLi 161 (397)
T KOG4283|consen 96 HENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTN--T--LQEAVDFKMEG----------KVYSHAMSPMAMSHCLI 161 (397)
T ss_pred CCccceeeeeeeEEeeecCceeecccccceEEEeecc--c--ceeeEEeecCc----------eeehhhcChhhhcceEE
Confidence 4556778888889998 66788899999999995544 4 44444444433 48888898853 478
Q ss_pred EEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCCc-eeeeee-------------
Q psy1859 84 ATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFNK-KRLCQF------------- 147 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~-~~~~~~------------- 147 (162)
++|..+-+|++.|+.+|..-..+.+|...|.++ |+|... .|++|+.||.|++||++.- .+...+
T Consensus 162 A~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~ 241 (397)
T KOG4283|consen 162 AAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKT 241 (397)
T ss_pred EEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccc
Confidence 889999999999999999999999999999999 999766 5788999999999999854 233333
Q ss_pred -ccCCCceeEEEecCC
Q psy1859 148 -HRYDTGITSLCFSYD 162 (162)
Q Consensus 148 -~~~~~~v~~v~~~pd 162 (162)
..|.+.|.+++|+.|
T Consensus 242 n~ah~gkvngla~tSd 257 (397)
T KOG4283|consen 242 NTAHYGKVNGLAWTSD 257 (397)
T ss_pred cccccceeeeeeeccc
Confidence 246677888888764
No 111
>KOG1036|consensus
Probab=99.78 E-value=2.8e-17 Score=106.16 Aligned_cols=143 Identities=22% Similarity=0.275 Sum_probs=110.4
Q ss_pred CcccceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC
Q psy1859 1 MGYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
|+....+++.+-+..|+.+.|+|.+..|+++++||.+++|+.+... .+..+. |..++.+++|.+ .
T Consensus 1 ~~~~~~~l~npP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~--l~~~~~------------~~~plL~c~F~d-~ 65 (323)
T KOG1036|consen 1 MSPNEFELENPPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANS--LKLKFK------------HGAPLLDCAFAD-E 65 (323)
T ss_pred CCccccccCCCChhceeeEEEcCcCCcEEEEeccCcEEEEeccchh--hhhhee------------cCCceeeeeccC-C
Confidence 4445556667778889999999999999999999999997766543 333332 444899999987 4
Q ss_pred CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEe
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 159 (162)
..+++|+.||.|+++|+..+.. ..+..|..++.++ +.+....+++|+.|++|++||.+....+..+.... .|.++..
T Consensus 66 ~~~~~G~~dg~vr~~Dln~~~~-~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~k-kVy~~~v 143 (323)
T KOG1036|consen 66 STIVTGGLDGQVRRYDLNTGNE-DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGK-KVYCMDV 143 (323)
T ss_pred ceEEEeccCceEEEEEecCCcc-eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCc-eEEEEec
Confidence 6788999999999999998754 3445689999999 98888889999999999999999755555444322 5666554
Q ss_pred c
Q psy1859 160 S 160 (162)
Q Consensus 160 ~ 160 (162)
.
T Consensus 144 ~ 144 (323)
T KOG1036|consen 144 S 144 (323)
T ss_pred c
Confidence 3
No 112
>KOG0646|consensus
Probab=99.77 E-value=1.3e-17 Score=112.76 Aligned_cols=143 Identities=19% Similarity=0.245 Sum_probs=108.1
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEec----CC-cccceeeeeeeeeeeccCcccceeceEEEEecCCC--CE
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLD----TG-PEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY--NT 82 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~ 82 (162)
+.+.-.++|+.|+-|+.+|++|+.||.|.+|..- .. +....+...+..|. -+|+++...+.| ..
T Consensus 120 ~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~Ht---------lsITDl~ig~Gg~~~r 190 (476)
T KOG0646|consen 120 SAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHT---------LSITDLQIGSGGTNAR 190 (476)
T ss_pred HhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCc---------ceeEEEEecCCCccce
Confidence 3445568999999999999999999999998752 11 11123334444444 478888887764 67
Q ss_pred EEEecCCCeEEEEeCCCcccee---------------------------------------------------------e
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLC---------------------------------------------------------Q 105 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~---------------------------------------------------------~ 105 (162)
+++++.|..+++||+..+..+. .
T Consensus 191 l~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~ 270 (476)
T KOG0646|consen 191 LYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINV 270 (476)
T ss_pred EEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeee
Confidence 8888888888888887543221 2
Q ss_pred eeeccc--ceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 106 FHRYDT--GITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 106 ~~~~~~--~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+.+|.+ .|+|+ ++-||.+|++|+.||.+.|||+.+.++++++..-.++|+.+.+.|
T Consensus 271 ~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~ 329 (476)
T KOG0646|consen 271 LVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINP 329 (476)
T ss_pred eccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeec
Confidence 234545 89999 999999999999999999999999999998876678899888743
No 113
>KOG1063|consensus
Probab=99.77 E-value=6.5e-18 Score=119.10 Aligned_cols=144 Identities=13% Similarity=0.193 Sum_probs=112.9
Q ss_pred eeeccccccEEEEEEeeCCCeEEEEcCCCc---EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE
Q psy1859 7 RRESSLKFQTRCIKCFPNKQGYVLSSIEGR---AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF 83 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~---i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l 83 (162)
+....+.+.+.+++.+|+++.++++..... ..||.|+... ...+..+..|.. .|+.++|||++++|
T Consensus 519 ~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~--W~~~~~L~~HsL---------TVT~l~FSpdg~~L 587 (764)
T KOG1063|consen 519 HKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN--WLQVQELEGHSL---------TVTRLAFSPDGRYL 587 (764)
T ss_pred HHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc--hhhhheecccce---------EEEEEEECCCCcEE
Confidence 334556788999999999999999865533 2345577665 555556677766 69999999999999
Q ss_pred EEecCCCeEEEEeCCCcc----ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc--eeeee--eccCCCce
Q psy1859 84 ATGGSDGYVNIWDGFNKK----RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK--KRLCQ--FHRYDTGI 154 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~~~----~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~--~~~~~~~v 154 (162)
++.++|..+.+|...... .....+.|...|.++ |+|++.+++|++.|.+|++|..... +.+.. ...+..+|
T Consensus 588 LsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aV 667 (764)
T KOG1063|consen 588 LSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAV 667 (764)
T ss_pred EEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCce
Confidence 999999999999886532 122356788999999 9999999999999999999998776 44433 23577889
Q ss_pred eEEEecC
Q psy1859 155 TSLCFSY 161 (162)
Q Consensus 155 ~~v~~~p 161 (162)
+.++|.|
T Consensus 668 TAv~~~~ 674 (764)
T KOG1063|consen 668 TAVAYLP 674 (764)
T ss_pred eeEEeec
Confidence 9999876
No 114
>KOG1332|consensus
Probab=99.77 E-value=2.6e-18 Score=108.06 Aligned_cols=142 Identities=13% Similarity=0.132 Sum_probs=111.7
Q ss_pred ccccccEEEEEEee--CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC--CEEEE
Q psy1859 10 SSLKFQTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY--NTFAT 85 (162)
Q Consensus 10 ~~~~~~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~l~~ 85 (162)
..+.+++..++|-. .|.+|++++.||.|.||...... ....+.... |...|++++|.|.+ -.|++
T Consensus 53 ~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~--w~k~~e~~~---------h~~SVNsV~wapheygl~Lac 121 (299)
T KOG1332|consen 53 TGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGR--WTKAYEHAA---------HSASVNSVAWAPHEYGLLLAC 121 (299)
T ss_pred cCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCc--hhhhhhhhh---------hcccceeecccccccceEEEE
Confidence 44567788899864 69999999999999997655433 445554444 44589999999975 67889
Q ss_pred ecCCCeEEEEeCCCc-c--ceeeeeecccceeEE-EcCC---C-----------CEEEEecCCCeEEEEeCCCce--eee
Q psy1859 86 GGSDGYVNIWDGFNK-K--RLCQFHRYDTGITSL-FHQE---Y-----------NTFATGGSDGYVNIWDGFNKK--RLC 145 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~-~--~~~~~~~~~~~v~~~-~~~~---~-----------~~l~~~~~d~~i~iwd~~~~~--~~~ 145 (162)
++.||.|.+.+.+.. . ..+...+|.-.++++ |.|. | +.|++|+.|+.|+||+..++. ..+
T Consensus 122 asSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~ 201 (299)
T KOG1332|consen 122 ASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLER 201 (299)
T ss_pred eeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhh
Confidence 999999999988764 2 233455788889999 9884 4 579999999999999998763 355
Q ss_pred eeccCCCceeEEEecCC
Q psy1859 146 QFHRYDTGITSLCFSYD 162 (162)
Q Consensus 146 ~~~~~~~~v~~v~~~pd 162 (162)
++.+|.+.|+.++|+|.
T Consensus 202 ~l~~H~dwVRDVAwaP~ 218 (299)
T KOG1332|consen 202 TLEGHKDWVRDVAWAPS 218 (299)
T ss_pred hhhhcchhhhhhhhccc
Confidence 58899999999999984
No 115
>KOG0771|consensus
Probab=99.77 E-value=1.3e-17 Score=111.50 Aligned_cols=135 Identities=20% Similarity=0.167 Sum_probs=105.7
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
+...+++++.+|..+++++.||.++||+|.... .+..... |...|.+++|+|+++.|++.+.| ..+
T Consensus 145 g~~k~vaf~~~gs~latgg~dg~lRv~~~Ps~~----t~l~e~~---------~~~eV~DL~FS~dgk~lasig~d-~~~ 210 (398)
T KOG0771|consen 145 GQQKVVAFNGDGSKLATGGTDGTLRVWEWPSML----TILEEIA---------HHAEVKDLDFSPDGKFLASIGAD-SAR 210 (398)
T ss_pred CcceEEEEcCCCCEeeeccccceEEEEecCcch----hhhhhHh---------hcCccccceeCCCCcEEEEecCC-ceE
Confidence 334789999999999999999999998775432 2222222 33469999999999999999999 899
Q ss_pred EEeCCCccceeeee------------------------------------------------------ecccceeEE-Ec
Q psy1859 94 IWDGFNKKRLCQFH------------------------------------------------------RYDTGITSL-FH 118 (162)
Q Consensus 94 ~wd~~~~~~~~~~~------------------------------------------------------~~~~~v~~~-~~ 118 (162)
+|+.+++..+.... .....++++ .+
T Consensus 211 VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS 290 (398)
T KOG0771|consen 211 VWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVS 290 (398)
T ss_pred EEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEc
Confidence 99998772111000 001267788 99
Q ss_pred CCCCEEEEecCCCeEEEEeCCCceeeeee-ccCCCceeEEEecCC
Q psy1859 119 QEYNTFATGGSDGYVNIWDGFNKKRLCQF-HRYDTGITSLCFSYD 162 (162)
Q Consensus 119 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~v~~~pd 162 (162)
++|++++.|+.||.|-|++..+.+.++.. +.|...|+.+.|+||
T Consensus 291 ~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pd 335 (398)
T KOG0771|consen 291 DDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPD 335 (398)
T ss_pred CCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCC
Confidence 99999999999999999999888776655 479999999999997
No 116
>KOG0281|consensus
Probab=99.77 E-value=1.3e-18 Score=114.58 Aligned_cols=120 Identities=16% Similarity=0.230 Sum_probs=100.5
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
+.+++++++.|.++++|+.+ + ...+.++.+|.. .|.|+.+. ++++++|+.|.+|++||+..|.++
T Consensus 329 d~kyIVsASgDRTikvW~~s--t--~efvRtl~gHkR---------GIAClQYr--~rlvVSGSSDntIRlwdi~~G~cL 393 (499)
T KOG0281|consen 329 DDKYIVSASGDRTIKVWSTS--T--CEFVRTLNGHKR---------GIACLQYR--DRLVVSGSSDNTIRLWDIECGACL 393 (499)
T ss_pred ccceEEEecCCceEEEEecc--c--eeeehhhhcccc---------cceehhcc--CeEEEecCCCceEEEEeccccHHH
Confidence 46799999999999996544 4 566777777765 68888764 689999999999999999999999
Q ss_pred eeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce---------eeeeeccCCCceeEEEec
Q psy1859 104 CQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK---------RLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 104 ~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~---------~~~~~~~~~~~v~~v~~~ 160 (162)
+.+.+|+.-|.++ |. .+.+++|+.||+|++||+..+. ++.++..|.+.|..+.|.
T Consensus 394 RvLeGHEeLvRciRFd--~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD 458 (499)
T KOG0281|consen 394 RVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD 458 (499)
T ss_pred HHHhchHHhhhheeec--CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec
Confidence 9999999999999 85 6789999999999999997653 345556788888888875
No 117
>KOG1539|consensus
Probab=99.76 E-value=4.5e-17 Score=117.01 Aligned_cols=140 Identities=16% Similarity=0.181 Sum_probs=112.8
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
....+++++.++.|++.+.|+..|.|.+ ++.++ ......+.. ..+|..+|++++...-++.+++++.+|.
T Consensus 447 ~~~~~~av~vs~CGNF~~IG~S~G~Id~--fNmQS--Gi~r~sf~~------~~ah~~~V~gla~D~~n~~~vsa~~~Gi 516 (910)
T KOG1539|consen 447 DDINATAVCVSFCGNFVFIGYSKGTIDR--FNMQS--GIHRKSFGD------SPAHKGEVTGLAVDGTNRLLVSAGADGI 516 (910)
T ss_pred cCcceEEEEEeccCceEEEeccCCeEEE--EEccc--Ceeeccccc------CccccCceeEEEecCCCceEEEccCcce
Confidence 4466788999999999999999999999 66655 222223211 1236668999999988899999999999
Q ss_pred EEEEeCCCcc-----------------------------------------ceeeeeecccceeEE-EcCCCCEEEEecC
Q psy1859 92 VNIWDGFNKK-----------------------------------------RLCQFHRYDTGITSL-FHQEYNTFATGGS 129 (162)
Q Consensus 92 v~~wd~~~~~-----------------------------------------~~~~~~~~~~~v~~~-~~~~~~~l~~~~~ 129 (162)
+..||..+.. .++.+.+|...++++ |||||+++++++.
T Consensus 517 lkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasm 596 (910)
T KOG1539|consen 517 LKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASM 596 (910)
T ss_pred EEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeec
Confidence 9999987543 122345688899999 9999999999999
Q ss_pred CCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 130 DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 130 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|++|++||+.++.++..+. -..+++++.|+|+
T Consensus 597 D~tIr~wDlpt~~lID~~~-vd~~~~sls~SPn 628 (910)
T KOG1539|consen 597 DSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPN 628 (910)
T ss_pred CCcEEEEeccCcceeeeEe-cCCcceeeEECCC
Confidence 9999999999999888775 4668899999985
No 118
>KOG0646|consensus
Probab=99.76 E-value=3.7e-17 Score=110.65 Aligned_cols=139 Identities=17% Similarity=0.198 Sum_probs=112.2
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.-.+++.+.|++-+|+|.+++.|+..|.+++|.+. + ......+..| -..|+++.|+-++..|++|+.
T Consensus 77 ~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWels--s--G~LL~v~~aH---------YQ~ITcL~fs~dgs~iiTgsk 143 (476)
T KOG0646|consen 77 YIVLPGPVHALASSNLGYFLLAGTISGNLYLWELS--S--GILLNVLSAH---------YQSITCLKFSDDGSHIITGSK 143 (476)
T ss_pred hcccccceeeeecCCCceEEEeecccCcEEEEEec--c--ccHHHHHHhh---------ccceeEEEEeCCCcEEEecCC
Confidence 34567889999999999999999999999996554 3 3334343444 347999999999999999999
Q ss_pred CCeEEEEeCCC---------ccceeeeeecccceeEE-EcC--CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeE
Q psy1859 89 DGYVNIWDGFN---------KKRLCQFHRYDTGITSL-FHQ--EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS 156 (162)
Q Consensus 89 d~~v~~wd~~~---------~~~~~~~~~~~~~v~~~-~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 156 (162)
||.|.+|.+-+ -++...+..|.-+|+++ ..+ ...+++|++.|.++++||+..+..+.++. ....+.+
T Consensus 144 Dg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~a 222 (476)
T KOG0646|consen 144 DGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKA 222 (476)
T ss_pred CccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCccee
Confidence 99999997642 35677888999999999 444 45689999999999999999998877765 4557888
Q ss_pred EEecC
Q psy1859 157 LCFSY 161 (162)
Q Consensus 157 v~~~p 161 (162)
++.+|
T Consensus 223 v~lDp 227 (476)
T KOG0646|consen 223 VALDP 227 (476)
T ss_pred EEEcc
Confidence 87776
No 119
>KOG0307|consensus
Probab=99.74 E-value=2.6e-17 Score=121.28 Aligned_cols=154 Identities=12% Similarity=0.124 Sum_probs=111.9
Q ss_pred eeccccccEEEEEEeeCC-CeEEEEcCCCcEEEEEecCCccc-----c---ee------------------------eee
Q psy1859 8 RESSLKFQTRCIKCFPNK-QGYVLSSIEGRAAVEYLDTGPEM-----Q---KM------------------------KYA 54 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~-~~l~~~~~~g~i~i~~~~~~~~~-----~---~~------------------------~~~ 54 (162)
....++++|..+.|++.+ +.|++|+++|.|.|||++.-+.- . .. ++.
T Consensus 111 ~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWD 190 (1049)
T KOG0307|consen 111 TKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWD 190 (1049)
T ss_pred hhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecc
Confidence 346688999999999964 58899999999999776431100 0 00 000
Q ss_pred eeeeeecc--CcccceeceEEEEecCCC-CEEEEecCC---CeEEEEeCCCc-cceeeeeecccceeEE-EcC-CCCEEE
Q psy1859 55 FKCHRIKE--DGIEKIYPVNAISFHQEY-NTFATGGSD---GYVNIWDGFNK-KRLCQFHRYDTGITSL-FHQ-EYNTFA 125 (162)
Q Consensus 55 ~~~~~~~~--~~~~~~~~v~~~~~~p~~-~~l~~~~~d---~~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~-~~~~l~ 125 (162)
++.....- ....-...+..++|||+. ..+++++.| -.|.+||+|.. .+++.+.+|...+.++ |++ |..+++
T Consensus 191 lr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lll 270 (1049)
T KOG0307|consen 191 LRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLL 270 (1049)
T ss_pred ccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhh
Confidence 00000000 001111247799999998 566666554 57899999974 6788889999999999 999 558999
Q ss_pred EecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 126 TGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 126 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+++.|+.|..|+..+++.+..+....+.+..+.|+|
T Consensus 271 SsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~p 306 (1049)
T KOG0307|consen 271 SSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCP 306 (1049)
T ss_pred cccCCCCeeEecCCCceEeeecCCCCcceeeeeecC
Confidence 999999999999999999999987778999999997
No 120
>KOG1007|consensus
Probab=99.74 E-value=6.7e-17 Score=104.06 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=106.9
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC--CCCEEEEecCCC
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ--EYNTFATGGSDG 90 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~l~~~~~d~ 90 (162)
-+.+.|+.|.|++..+++-. +..|.+|+.+.... .+..+...... +|....++-+|+| +++.+++. .|+
T Consensus 123 vg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~---~vaev~ss~s~----e~~~~ftsg~WspHHdgnqv~tt-~d~ 193 (370)
T KOG1007|consen 123 VGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSK---IVAEVLSSESA----EMRHSFTSGAWSPHHDGNQVATT-SDS 193 (370)
T ss_pred hCceeeEEEcCCCCeeEEec-cCceEEEEcccCcc---hheeecccccc----cccceecccccCCCCccceEEEe-CCC
Confidence 36789999999998888755 88899988776542 12222211111 1444688999999 45666655 588
Q ss_pred eEEEEeCCCccceeeee-ecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEEEecC
Q psy1859 91 YVNIWDGFNKKRLCQFH-RYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~-~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p 161 (162)
.++.||+++.++...+. .|...+..+ |+|+.+ +|++++.||.|++||.|.. .++..+.+|.-.|++|.|+|
T Consensus 194 tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~ 268 (370)
T KOG1007|consen 194 TLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNP 268 (370)
T ss_pred cEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecC
Confidence 99999999877766654 678889999 999766 6888999999999999854 46888999999999999987
No 121
>KOG1274|consensus
Probab=99.74 E-value=2.4e-16 Score=114.27 Aligned_cols=144 Identities=17% Similarity=0.176 Sum_probs=113.9
Q ss_pred eeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEE
Q psy1859 6 QRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT 85 (162)
Q Consensus 6 ~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 85 (162)
......+..++++++++.+|++++.|++|-.|++ .+... ......+++|.. +|.++.|+|++++|++
T Consensus 89 ~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~--~~~~D--~s~~~~lrgh~a---------pVl~l~~~p~~~fLAv 155 (933)
T KOG1274|consen 89 DTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKL--LNLDD--SSQEKVLRGHDA---------PVLQLSYDPKGNFLAV 155 (933)
T ss_pred cceeeeeeccceEEEEecCCcEEEeecCceeEEE--Eeccc--cchheeecccCC---------ceeeeeEcCCCCEEEE
Confidence 3366778888999999999999999999999999 44433 334445556554 8999999999999999
Q ss_pred ecCCCeEEEEeCCCccceeeeeec--------ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec--cCCCce
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQFHRY--------DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH--RYDTGI 154 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~~~~--------~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v 154 (162)
.+.||.|++||+.++.....+..- ...+..+ |+|+|..++..+.|+.|++|+..+......+. .+...+
T Consensus 156 ss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~ 235 (933)
T KOG1274|consen 156 SSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKF 235 (933)
T ss_pred EecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccce
Confidence 999999999999998766655421 2233444 99998888888899999999998877665554 345558
Q ss_pred eEEEecCC
Q psy1859 155 TSLCFSYD 162 (162)
Q Consensus 155 ~~v~~~pd 162 (162)
..++|+|+
T Consensus 236 ~~~~wsPn 243 (933)
T KOG1274|consen 236 SDLQWSPN 243 (933)
T ss_pred EEEEEcCC
Confidence 99999995
No 122
>KOG1445|consensus
Probab=99.73 E-value=9.9e-18 Score=117.95 Aligned_cols=119 Identities=14% Similarity=0.216 Sum_probs=100.3
Q ss_pred cEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcc---cceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCC
Q psy1859 15 QTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPE---MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSD 89 (162)
Q Consensus 15 ~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d 89 (162)
.+..+.|.| |...|+++++||.|+||.+..... ..+....+..| ...|+++.|+|-. ..|++++.|
T Consensus 629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h---------~eKI~slRfHPLAadvLa~asyd 699 (1012)
T KOG1445|consen 629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIH---------GEKITSLRFHPLAADVLAVASYD 699 (1012)
T ss_pred eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecc---------cceEEEEEecchhhhHhhhhhcc
Confidence 457788999 678899999999999998866531 12223333444 4479999999976 889999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
-+|++||+++++....+.+|...|..+ |||+|+.+++.+.||+|++|+.+++.
T Consensus 700 ~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 700 STIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred ceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence 999999999999999999999999999 99999999999999999999988653
No 123
>KOG0647|consensus
Probab=99.73 E-value=1e-16 Score=103.52 Aligned_cols=125 Identities=38% Similarity=0.661 Sum_probs=108.8
Q ss_pred cccceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCC
Q psy1859 2 GYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN 81 (162)
Q Consensus 2 ~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 81 (162)
+.+.++.+++++.+++||++..+...++.|+-+|.+.|..+|... .+..++|++|+......+-.++|.+|+|+|...
T Consensus 187 ~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~--~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hg 264 (347)
T KOG0647|consen 187 PTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPN--PKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHG 264 (347)
T ss_pred cchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCC--ccCceeEEEeccCCCCCCceEEecceEeecccc
Confidence 456778899999999999999999889999999999997777644 578889999986543333477899999999889
Q ss_pred EEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEec
Q psy1859 82 TFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG 128 (162)
Q Consensus 82 ~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~ 128 (162)
.|++.+.||.+..||-.....++..+.+..+|+++ |+.+|.+++.+.
T Consensus 265 tlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 265 TLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYAL 312 (347)
T ss_pred eEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEEe
Confidence 99999999999999998888888888899999999 999999888763
No 124
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.73 E-value=8.9e-16 Score=97.10 Aligned_cols=130 Identities=18% Similarity=0.284 Sum_probs=91.9
Q ss_pred EEEEEeeCCCeEEEEcC----------CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEE-
Q psy1859 17 RCIKCFPNKQGYVLSSI----------EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT- 85 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~----------~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~- 85 (162)
-.+.|+|+|++|++-.. -+...||.++... . ....+... ..++|.+++|+|++..|++
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~--~-~~~~i~l~--------~~~~I~~~~WsP~g~~favi 77 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKN--I-PVESIELK--------KEGPIHDVAWSPNGNEFAVI 77 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCC--C-ccceeecc--------CCCceEEEEECcCCCEEEEE
Confidence 45789999998776433 2345566565443 1 11111111 1126999999999987654
Q ss_pred -ecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC---CeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 86 -GGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD---GYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 86 -~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
|..+..+.+||++ ++.+..+. ...+..+ |+|+|+++++++.+ |.|.+||+++.+.+.... |. .++.++|+
T Consensus 78 ~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~Ws 152 (194)
T PF08662_consen 78 YGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWS 152 (194)
T ss_pred EccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEc
Confidence 4467899999997 56666653 4667788 99999999998744 679999999888887765 44 47899999
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
||
T Consensus 153 Pd 154 (194)
T PF08662_consen 153 PD 154 (194)
T ss_pred CC
Confidence 97
No 125
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.73 E-value=5.6e-16 Score=98.01 Aligned_cols=120 Identities=19% Similarity=0.323 Sum_probs=88.3
Q ss_pred eccccccEEEEEEeeCCCeEEEEc--CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSS--IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~--~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
....++.|.+++|+|+++.|++.. .++.+.+|+.+ .+.+..+... .+..+.|+|+|++++++
T Consensus 55 ~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-----~~~i~~~~~~-----------~~n~i~wsP~G~~l~~~ 118 (194)
T PF08662_consen 55 ELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-----GKKIFSFGTQ-----------PRNTISWSPDGRFLVLA 118 (194)
T ss_pred eccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-----ccEeEeecCC-----------CceEEEECCCCCEEEEE
Confidence 333456799999999999876653 45678885543 3334443321 47889999999999987
Q ss_pred cC---CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC------CCeEEEEeCCCceeeeee
Q psy1859 87 GS---DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS------DGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 87 ~~---d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~ 147 (162)
+. .|.+.+||.++.+.+..... ..++.+ |+|+|++++++.. |+.++||+. +|+.+...
T Consensus 119 g~~n~~G~l~~wd~~~~~~i~~~~~--~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~ 186 (194)
T PF08662_consen 119 GFGNLNGDLEFWDVRKKKKISTFEH--SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKK 186 (194)
T ss_pred EccCCCcEEEEEECCCCEEeecccc--CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEec
Confidence 64 47799999998877776642 346778 9999999999874 788999998 56666543
No 126
>KOG0299|consensus
Probab=99.72 E-value=1.3e-16 Score=107.89 Aligned_cols=136 Identities=15% Similarity=0.186 Sum_probs=113.0
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+..++.+++.++|+++|++|+.|..+.||+.+. ...+..+++|+. .|.+++|-.....+.+++.|.
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t----~ehv~~~~ghr~---------~V~~L~fr~gt~~lys~s~Dr 266 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDT----LEHVKVFKGHRG---------AVSSLAFRKGTSELYSASADR 266 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCceEEEecCcc----cchhhccccccc---------ceeeeeeecCccceeeeecCC
Confidence 4556788999999999999999999999965554 556666777776 799999988778999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
.+++|++.....+.++.+|...|..+ -..-++.+-+|+.|.++++|++.. .....+.++.+.+-|++|-
T Consensus 267 svkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv~~I 336 (479)
T KOG0299|consen 267 SVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFI 336 (479)
T ss_pred ceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccc-cceeeeeCCCCCeeeEEEe
Confidence 99999999988899999999999999 555667777777999999999943 3344467888889888874
No 127
>KOG0299|consensus
Probab=99.72 E-value=9e-17 Score=108.67 Aligned_cols=147 Identities=16% Similarity=0.224 Sum_probs=118.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccce-eeee----eeeeeeccCc--ccceeceEEEEecCCCCE
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQK-MKYA----FKCHRIKEDG--IEKIYPVNAISFHQEYNT 82 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~-~~~~----~~~~~~~~~~--~~~~~~v~~~~~~p~~~~ 82 (162)
-.+.-.+.+++.+|+.++.++++.+++|.-|+..... .. .+.. ++.|...... ..|...+.+++.++++++
T Consensus 139 ~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk--~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky 216 (479)
T KOG0299|consen 139 GKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGK--KDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY 216 (479)
T ss_pred ccccCcceEEEeeccccceeecCCCcceeeeehhcCc--ccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE
Confidence 3345567889999999999999999988875543322 11 1111 1112222111 368889999999999999
Q ss_pred EEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEE
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLC 158 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~ 158 (162)
|++|+.|..|.||+.++.+.++.+.+|.+.|.++ |-.....+++++.|..+++|++.....+.++.+|++.|.+|.
T Consensus 217 latgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Id 293 (479)
T KOG0299|consen 217 LATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGID 293 (479)
T ss_pred EEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeec
Confidence 9999999999999999999999999999999999 988888899999999999999998888888889999888764
No 128
>KOG2055|consensus
Probab=99.72 E-value=6.7e-16 Score=104.72 Aligned_cols=153 Identities=22% Similarity=0.269 Sum_probs=112.3
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeee------------eee-eecc--------------
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAF------------KCH-RIKE-------------- 62 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~------------~~~-~~~~-------------- 62 (162)
.+..+.|+++.|+|....+++|+.|++++||.+|.+.+.......+ .++ ....
T Consensus 210 ~ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ 289 (514)
T KOG2055|consen 210 HPSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLET 289 (514)
T ss_pred CcCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccc
Confidence 4456788999999999999999999999999888765321110000 001 0000
Q ss_pred -------------------------------------------------CcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 63 -------------------------------------------------DGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 63 -------------------------------------------------~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
...+..+.|..+.|+.+++.|++++.+|.|+
T Consensus 290 ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~ 369 (514)
T KOG2055|consen 290 AKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVY 369 (514)
T ss_pred cccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEE
Confidence 1122334788999999999999999999999
Q ss_pred EEeCCCccceeeeeecccc-eeEE-EcCCCCEEEEecCCCeEEEEeCCC------ceeeeeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTG-ITSL-FHQEYNTFATGGSDGYVNIWDGFN------KKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~-v~~~-~~~~~~~l~~~~~d~~i~iwd~~~------~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+||++...++.++...++. -+++ .+++|.||++|+..|.|.|||..+ .+++..+..-...|++++|+||
T Consensus 370 v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d 446 (514)
T KOG2055|consen 370 VWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHD 446 (514)
T ss_pred EEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcc
Confidence 9999999888888654332 2234 778999999999999999999653 3456666666678999999986
No 129
>KOG0270|consensus
Probab=99.72 E-value=1.6e-16 Score=107.02 Aligned_cols=131 Identities=20% Similarity=0.263 Sum_probs=101.9
Q ss_pred EEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEEE
Q psy1859 17 RCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVNI 94 (162)
Q Consensus 17 ~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~ 94 (162)
..++|+.. .+.|++|+.|.+|++|+.+..+ +..++..|. ..|.+++|+|.. ..|++|+.|+++.+
T Consensus 247 l~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~----p~~s~~~~~---------k~Vq~l~wh~~~p~~LLsGs~D~~V~l 313 (463)
T KOG0270|consen 247 LALSWNRNFRNVLASGSADKTVKLWDVDTGK----PKSSITHHG---------KKVQTLEWHPYEPSVLLSGSYDGTVAL 313 (463)
T ss_pred HHHHhccccceeEEecCCCceEEEEEcCCCC----cceehhhcC---------CceeEEEecCCCceEEEeccccceEEe
Confidence 45777775 4568899999999997776643 333434333 379999999986 88999999999999
Q ss_pred EeCCCccc-eeeeeecccceeEE-EcCC-CCEEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEEEecC
Q psy1859 95 WDGFNKKR-LCQFHRYDTGITSL-FHQE-YNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 95 wd~~~~~~-~~~~~~~~~~v~~~-~~~~-~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p 161 (162)
.|.+.... -..+ ...+.|-.+ |.|. ...++++..||+++-+|+|+. +++.+++.|.++|.++++++
T Consensus 314 ~D~R~~~~s~~~w-k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~ 383 (463)
T KOG0270|consen 314 KDCRDPSNSGKEW-KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNI 383 (463)
T ss_pred eeccCccccCceE-EeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecC
Confidence 99995322 2222 235678888 8884 446778889999999999976 88999999999999999875
No 130
>KOG4328|consensus
Probab=99.72 E-value=1.6e-16 Score=107.57 Aligned_cols=147 Identities=16% Similarity=0.161 Sum_probs=108.2
Q ss_pred eeeccccccEEEEEEeeCC--CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEE
Q psy1859 7 RRESSLKFQTRCIKCFPNK--QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTF 83 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~~--~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l 83 (162)
.......+.|.+++|+|.. +.+++|...|.|-+|+++.+......++.+..|. .+|.++.|+|.. ..+
T Consensus 180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs---------~~Vs~l~F~P~n~s~i 250 (498)
T KOG4328|consen 180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHS---------GPVSGLKFSPANTSQI 250 (498)
T ss_pred ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCC---------ccccceEecCCChhhe
Confidence 3445567889999999964 5678888889999999975443344455544444 489999999977 789
Q ss_pred EEecCCCeEEEEeCCCcc---------------------------------------------ceeeeeecccceeEE-E
Q psy1859 84 ATGGSDGYVNIWDGFNKK---------------------------------------------RLCQFHRYDTGITSL-F 117 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~~~---------------------------------------------~~~~~~~~~~~v~~~-~ 117 (162)
++.+.||.|++-|++... ....+..|...|..+ +
T Consensus 251 ~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~ 330 (498)
T KOG4328|consen 251 YSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVAL 330 (498)
T ss_pred eeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeec
Confidence 999999999988886431 011122355678888 9
Q ss_pred cC-CCCEEEEecCCCeEEEEeCCCce--e--eeeeccCCCceeEEEecCC
Q psy1859 118 HQ-EYNTFATGGSDGYVNIWDGFNKK--R--LCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 118 ~~-~~~~l~~~~~d~~i~iwd~~~~~--~--~~~~~~~~~~v~~v~~~pd 162 (162)
+| ...+++|++.|++++|||+|.-. . +.....|...|.+..|||+
T Consensus 331 NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs 380 (498)
T KOG4328|consen 331 NPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPS 380 (498)
T ss_pred CCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCC
Confidence 99 55689999999999999998532 1 2223368999999999995
No 131
>KOG2919|consensus
Probab=99.71 E-value=1.2e-16 Score=104.23 Aligned_cols=138 Identities=16% Similarity=0.228 Sum_probs=108.8
Q ss_pred cccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-C
Q psy1859 11 SLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-S 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~ 88 (162)
..++-+.|++++|- .+.++.++....+-|+.++.. .+...+-+|. +.|+.+.|.++|+.|.+|. .
T Consensus 205 gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~----~pl~llggh~---------gGvThL~~~edGn~lfsGaRk 271 (406)
T KOG2919|consen 205 GQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGR----RPLQLLGGHG---------GGVTHLQWCEDGNKLFSGARK 271 (406)
T ss_pred cccceeeeeeccCCCCcceeeecccceeeeEecCCC----CceeeecccC---------CCeeeEEeccCcCeecccccC
Confidence 34567788999994 568999999999999777653 3444444444 4899999999998888887 5
Q ss_pred CCeEEEEeCCCc-cceeeeeeccc-ceeEE---EcCCCCEEEEecCCCeEEEEeCCC-ceeeeeeccCCCceeEEEecC
Q psy1859 89 DGYVNIWDGFNK-KRLCQFHRYDT-GITSL---FHQEYNTFATGGSDGYVNIWDGFN-KKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 89 d~~v~~wd~~~~-~~~~~~~~~~~-~v~~~---~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~v~~~p 161 (162)
|-.|..||++.. .++..+..|.. .-..| ..|++++|++|+.||.|++||+++ +..+..+..+...++.++++|
T Consensus 272 ~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP 350 (406)
T KOG2919|consen 272 DDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNP 350 (406)
T ss_pred CCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCc
Confidence 789999999974 55666666544 33334 678999999999999999999988 666788888888888888887
No 132
>KOG0274|consensus
Probab=99.71 E-value=2.3e-16 Score=112.59 Aligned_cols=136 Identities=23% Similarity=0.316 Sum_probs=111.3
Q ss_pred eeccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 8 RESSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
....+.+|...+.... ....+++|+.|.+|++|+++. ...+..+.+|.. +|.++..+ +.++++|
T Consensus 283 C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n----~~~l~l~~~h~~---------~V~~v~~~--~~~lvsg 347 (537)
T KOG0274|consen 283 CTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTN----GACLNLLRGHTG---------PVNCVQLD--EPLLVSG 347 (537)
T ss_pred EEEEecCCCceEEEEEccCceEeeccCCceEEEEeccC----cceEEEeccccc---------cEEEEEec--CCEEEEE
Confidence 3455666766666544 455677789999999977763 344545454544 89999998 7899999
Q ss_pred cCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEEEe
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~ 159 (162)
+.|+.|.+||+..++++..+.+|...|+++ +.+. ..+++|+-|+.|++||++++ +++.++.+|.+-+.++.+
T Consensus 348 s~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~ 421 (537)
T KOG0274|consen 348 SYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL 421 (537)
T ss_pred ecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc
Confidence 999999999999999999999999999999 8765 89999999999999999999 999999999887776654
No 133
>KOG0643|consensus
Probab=99.71 E-value=2.8e-15 Score=95.71 Aligned_cols=137 Identities=15% Similarity=0.155 Sum_probs=113.6
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.++.+++.|.++.+|.+|.+++.|....||.-.. .+.+-++.+|+. +|.+++.+-+...+++|+.|.
T Consensus 8 GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~n----GerlGty~GHtG---------avW~~Did~~s~~liTGSAD~ 74 (327)
T KOG0643|consen 8 GHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLN----GERLGTYDGHTG---------AVWCCDIDWDSKHLITGSADQ 74 (327)
T ss_pred cCccccceEEecCCCcEEEEecCCCCceEEEecC----CceeeeecCCCc---------eEEEEEecCCcceeeeccccc
Confidence 3555678899999999999999999999984322 455666677665 899999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC-----CeEEEEeCC-------CceeeeeeccCCCceeEE
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD-----GYVNIWDGF-------NKKRLCQFHRYDTGITSL 157 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d-----~~i~iwd~~-------~~~~~~~~~~~~~~v~~v 157 (162)
.+++||+.+|+++..++ ...++..+ |+++|.+++...++ +.|.++|++ ...++.++..+.+.++..
T Consensus 75 t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a 153 (327)
T KOG0643|consen 75 TAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSA 153 (327)
T ss_pred eeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeee
Confidence 99999999999998886 46788899 99999988877543 579999998 344577777788888888
Q ss_pred EecC
Q psy1859 158 CFSY 161 (162)
Q Consensus 158 ~~~p 161 (162)
-|.|
T Consensus 154 ~Wg~ 157 (327)
T KOG0643|consen 154 LWGP 157 (327)
T ss_pred eecc
Confidence 8876
No 134
>KOG1273|consensus
Probab=99.71 E-value=1e-16 Score=104.36 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=84.1
Q ss_pred eEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
..++.|++.|.++++|..||.|.+||+.+...-+.+.+|..+|+++ ||+||++|+|++.|..+.+||+..|.+++++.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir- 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR- 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence 6799999999999999999999999999988888899999999999 99999999999999999999999999888876
Q ss_pred CCCceeEEEecC
Q psy1859 150 YDTGITSLCFSY 161 (162)
Q Consensus 150 ~~~~v~~v~~~p 161 (162)
..++|+...|+|
T Consensus 105 f~spv~~~q~hp 116 (405)
T KOG1273|consen 105 FDSPVWGAQWHP 116 (405)
T ss_pred ccCccceeeecc
Confidence 567888888887
No 135
>KOG4378|consensus
Probab=99.70 E-value=6.8e-16 Score=105.92 Aligned_cols=132 Identities=17% Similarity=0.236 Sum_probs=106.0
Q ss_pred EEEEEEeeCCCeE-EEEcCCCcEEEEEecCCcccceeeee-eeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeE
Q psy1859 16 TRCIKCFPNKQGY-VLSSIEGRAAVEYLDTGPEMQKMKYA-FKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYV 92 (162)
Q Consensus 16 ~~~i~~~~~~~~l-~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v 92 (162)
++-+.++|..+++ .+++++|.|.+|+..... +++. .+. |.++...|.|+|.. .+|++.+.|..|
T Consensus 167 vRll~ys~skr~lL~~asd~G~VtlwDv~g~s----p~~~~~~~---------HsAP~~gicfspsne~l~vsVG~Dkki 233 (673)
T KOG4378|consen 167 VRLLRYSPSKRFLLSIASDKGAVTLWDVQGMS----PIFHASEA---------HSAPCRGICFSPSNEALLVSVGYDKKI 233 (673)
T ss_pred EEEeecccccceeeEeeccCCeEEEEeccCCC----cccchhhh---------ccCCcCcceecCCccceEEEecccceE
Confidence 3467899977654 567899999996665433 2222 122 55689999999987 788899999999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce-eeeeeccCCCceeEEEecC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~p 161 (162)
.+||.+..+....+. ...+...+ |.++|.+|++|...|.|..||+|..+ ++.++..|...|++|+|.|
T Consensus 234 ~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~ 303 (673)
T KOG4378|consen 234 NIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQP 303 (673)
T ss_pred EEeecccccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeee
Confidence 999999766655553 56788889 99999999999999999999999654 6888889999999999975
No 136
>KOG0308|consensus
Probab=99.69 E-value=6.3e-16 Score=108.68 Aligned_cols=118 Identities=18% Similarity=0.196 Sum_probs=107.3
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
..+..+.+++.++.|..++.|+.++.+++ ||+.+ .+.+..+++|+. -|.++..+++|..+++++.||
T Consensus 169 G~k~siYSLA~N~t~t~ivsGgtek~lr~--wDprt--~~kimkLrGHTd---------NVr~ll~~dDGt~~ls~sSDg 235 (735)
T KOG0308|consen 169 GPKDSIYSLAMNQTGTIIVSGGTEKDLRL--WDPRT--CKKIMKLRGHTD---------NVRVLLVNDDGTRLLSASSDG 235 (735)
T ss_pred CCccceeeeecCCcceEEEecCcccceEE--ecccc--ccceeeeecccc---------ceEEEEEcCCCCeEeecCCCc
Confidence 55677899999999999999999999999 77766 667777788876 499999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
+|++||+...+++.++..|...+.++ .+|+-.++++|+.|+.|..=|+++.
T Consensus 236 tIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 236 TIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred eEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 99999999999999999999999999 9999999999999999999999874
No 137
>KOG0270|consensus
Probab=99.69 E-value=1.6e-16 Score=107.10 Aligned_cols=136 Identities=16% Similarity=0.250 Sum_probs=101.3
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeee--------e-eeccCcccceeceEEEEecCCC-CEEEEecCCCeEEE
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKC--------H-RIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVNI 94 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~ 94 (162)
|+++|.|+.+..|.||++|...... +...+.. . .......+|+.+|.+++|+..- +.|++|+.|.+|.+
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~-P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVL-PCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred cceEEEeccCceeEEeccccccccc-cceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 6899999999999999998754211 1111110 0 0001234688899999998875 78999999999999
Q ss_pred EeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 95 WDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 95 wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
||+.++++...+..|...|.++ |+| ...+|++|+.|+++.+.|.|........=...+.|-.++|.|
T Consensus 271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~ 339 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDP 339 (463)
T ss_pred EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecC
Confidence 9999999999999999999999 998 778999999999999999995322211112344566666654
No 138
>KOG1408|consensus
Probab=99.69 E-value=9.1e-16 Score=109.44 Aligned_cols=93 Identities=16% Similarity=0.144 Sum_probs=83.8
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeee---cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeee
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR---YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLC 145 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~---~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 145 (162)
.+..|+..|..+++++++.|..|+|||+.+++..+.|++ +.+....+ ..|.|-|+++.+.|.++.++|+-+++++.
T Consensus 598 TlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA 677 (1080)
T KOG1408|consen 598 TLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVA 677 (1080)
T ss_pred eEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhh
Confidence 466788888888999999999999999999999998875 44556666 99999999999999999999999999999
Q ss_pred eeccCCCceeEEEecCC
Q psy1859 146 QFHRYDTGITSLCFSYD 162 (162)
Q Consensus 146 ~~~~~~~~v~~v~~~pd 162 (162)
++.+|...|+.+.|.+|
T Consensus 678 ~m~GHsE~VTG~kF~nD 694 (1080)
T KOG1408|consen 678 QMTGHSEAVTGVKFLND 694 (1080)
T ss_pred hhcCcchheeeeeeccc
Confidence 99999999999999987
No 139
>KOG0294|consensus
Probab=99.68 E-value=1.6e-15 Score=98.60 Aligned_cols=124 Identities=23% Similarity=0.263 Sum_probs=100.3
Q ss_pred eEEEEcCCCcEEEEEecCCcc----cce----eeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCC
Q psy1859 27 GYVLSSIEGRAAVEYLDTGPE----MQK----MKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGF 98 (162)
Q Consensus 27 ~l~~~~~~g~i~i~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~ 98 (162)
.+++|+....|.-+..++... ..+ ..+.+ .+|..++++++.+ ++++++|+.|.+|+|||++
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~---------~aH~~sitavAVs--~~~~aSGssDetI~IYDm~ 71 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAF---------SAHAGSITALAVS--GPYVASGSSDETIHIYDMR 71 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccc---------cccccceeEEEec--ceeEeccCCCCcEEEEecc
Confidence 367777776665545554320 011 12222 2366799999985 7999999999999999999
Q ss_pred CccceeeeeecccceeEE-EcCCCC--EEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 99 NKKRLCQFHRYDTGITSL-FHQEYN--TFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 99 ~~~~~~~~~~~~~~v~~~-~~~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+.+.+..+..|.+.++++ |.++.. .|++|+.||.|.+|+...-.++..+++|...|+.++.+|
T Consensus 72 k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHP 137 (362)
T KOG0294|consen 72 KRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHP 137 (362)
T ss_pred chhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecC
Confidence 999999898999999999 888665 899999999999999999999999999999999999988
No 140
>KOG0639|consensus
Probab=99.68 E-value=1.4e-15 Score=104.54 Aligned_cols=140 Identities=15% Similarity=0.180 Sum_probs=107.2
Q ss_pred ccE-EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 14 FQT-RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 14 ~~~-~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
+.+ .+++++...+.+++| ..|.|+||++.... ....+..+.+.+.. ..++++.+.|+|+.|++|+.-.++
T Consensus 419 GEvVcAvtIS~~trhVyTg-GkgcVKVWdis~pg-~k~PvsqLdcl~rd-------nyiRSckL~pdgrtLivGGeastl 489 (705)
T KOG0639|consen 419 GEVVCAVTISNPTRHVYTG-GKGCVKVWDISQPG-NKSPVSQLDCLNRD-------NYIRSCKLLPDGRTLIVGGEASTL 489 (705)
T ss_pred CcEEEEEEecCCcceeEec-CCCeEEEeeccCCC-CCCccccccccCcc-------cceeeeEecCCCceEEecccccee
Confidence 444 446677777777775 45889998776542 23344455554221 269999999999999999999999
Q ss_pred EEEeCCCccce--eeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 93 NIWDGFNKKRL--CQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~~~~--~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|||+....+. ..+.........+ .+||.+..+++..||.|.|||+.+...++.+++|.+.+.||..++|
T Consensus 490 siWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~d 562 (705)
T KOG0639|consen 490 SIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKD 562 (705)
T ss_pred eeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCC
Confidence 99999876442 2333333445566 9999999999999999999999999999999999999999999875
No 141
>KOG2139|consensus
Probab=99.67 E-value=5.8e-15 Score=97.85 Aligned_cols=156 Identities=10% Similarity=0.168 Sum_probs=104.7
Q ss_pred ceeeeccccccEEEEEEeeCC-CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeec-cCcccceeceEEEEecCCCCE
Q psy1859 5 MQRRESSLKFQTRCIKCFPNK-QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIK-EDGIEKIYPVNAISFHQEYNT 82 (162)
Q Consensus 5 ~~~~~~~~~~~~~~i~~~~~~-~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~p~~~~ 82 (162)
...+.+.....++|++|-|.+ ..|++| -.+-|.||..+...+....+.....+... ....+| .+|++++|+++|..
T Consensus 132 pt~Lks~sQrnvtclawRPlsaselavg-Cr~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~ 209 (445)
T KOG2139|consen 132 PTKLKSVSQRNVTCLAWRPLSASELAVG-CRAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTI 209 (445)
T ss_pred CceecchhhcceeEEEeccCCcceeeee-ecceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCE
Confidence 345567777889999999975 445554 44668888766433222211111111110 112223 37999999999988
Q ss_pred EEEec-CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 83 FATGG-SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 83 l~~~~-~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
+++++ .|..|.+||..++..+.......+.++-+ |||||.+++++.-|+..++|+.....--.....-.+.|+.-+|+
T Consensus 210 l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWs 289 (445)
T KOG2139|consen 210 LVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWS 289 (445)
T ss_pred EeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeec
Confidence 88887 56899999999987666554455677778 99999999999999999999654433222233344578888888
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
|+
T Consensus 290 pc 291 (445)
T KOG2139|consen 290 PC 291 (445)
T ss_pred CC
Confidence 85
No 142
>KOG0300|consensus
Probab=99.66 E-value=1.1e-15 Score=99.91 Aligned_cols=120 Identities=19% Similarity=0.276 Sum_probs=97.3
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+.+..|-..|+.++++++|.+..+|+.+. ...+..+.+|.. ..+.+.-+|.++++++.+.|.+.+
T Consensus 273 ~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEt----ge~v~~LtGHd~---------ELtHcstHptQrLVvTsSrDtTFR 339 (481)
T KOG0300|consen 273 AVVSACDWLAGGQQMVTASWDRTANLWDVET----GEVVNILTGHDS---------ELTHCSTHPTQRLVVTSSRDTTFR 339 (481)
T ss_pred cceEehhhhcCcceeeeeeccccceeeeecc----CceeccccCcch---------hccccccCCcceEEEEeccCceeE
Confidence 3445556888899999999999999965544 556667777766 588888999999999999999999
Q ss_pred EEeCCCc-cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce-eeeee
Q psy1859 94 IWDGFNK-KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK-RLCQF 147 (162)
Q Consensus 94 ~wd~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~ 147 (162)
+||++.. ..+..|.+|...+++. |..+ ..+++|++|.+|++||+++.+ ++.++
T Consensus 340 LWDFReaI~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRsplATI 395 (481)
T KOG0300|consen 340 LWDFREAIQSVAVFQGHTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRSPLATI 395 (481)
T ss_pred eccchhhcceeeeecccccceeEEEEecC-CceeecCCCceEEEeeeccccCcceee
Confidence 9999953 3467888999999999 8865 468999999999999998764 24444
No 143
>KOG1007|consensus
Probab=99.66 E-value=2e-15 Score=97.37 Aligned_cols=134 Identities=19% Similarity=0.233 Sum_probs=100.1
Q ss_pred cEEEEEEee--CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCe
Q psy1859 15 QTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGY 91 (162)
Q Consensus 15 ~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~ 91 (162)
+.++-+|+| +++.+++ ..|+++..|+.. + ......+. .+|...|..++|+|+. ..|++|+.||.
T Consensus 172 ~ftsg~WspHHdgnqv~t-t~d~tl~~~D~R--T--~~~~~sI~--------dAHgq~vrdlDfNpnkq~~lvt~gDdgy 238 (370)
T KOG1007|consen 172 SFTSGAWSPHHDGNQVAT-TSDSTLQFWDLR--T--MKKNNSIE--------DAHGQRVRDLDFNPNKQHILVTCGDDGY 238 (370)
T ss_pred eecccccCCCCccceEEE-eCCCcEEEEEcc--c--hhhhcchh--------hhhcceeeeccCCCCceEEEEEcCCCcc
Confidence 345566888 6777776 567888885554 3 22222211 1244479999999987 67889999999
Q ss_pred EEEEeCCCc-cceeeeeecccceeEE-EcCC-CCEEEEecCCCeEEEEeCCCc---------------------------
Q psy1859 92 VNIWDGFNK-KRLCQFHRYDTGITSL-FHQE-YNTFATGGSDGYVNIWDGFNK--------------------------- 141 (162)
Q Consensus 92 v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~~-~~~l~~~~~d~~i~iwd~~~~--------------------------- 141 (162)
|++||.++- .+++.+..|..++.++ |+|. .+++.+|+.|..|.+|....-
T Consensus 239 vriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL 318 (370)
T KOG1007|consen 239 VRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPL 318 (370)
T ss_pred EEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccc
Confidence 999999984 5788999999999999 9994 457889999999999964320
Q ss_pred --eeeeeeccCCCceeEEEecC
Q psy1859 142 --KRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 142 --~~~~~~~~~~~~v~~v~~~p 161 (162)
..+.++..|.+.|++++||.
T Consensus 319 ~dg~l~tydehEDSVY~~aWSs 340 (370)
T KOG1007|consen 319 QDGQLETYDEHEDSVYALAWSS 340 (370)
T ss_pred cccccccccccccceEEEeecc
Confidence 12446778999999999974
No 144
>KOG1034|consensus
Probab=99.66 E-value=2.6e-15 Score=98.22 Aligned_cols=113 Identities=17% Similarity=0.216 Sum_probs=93.4
Q ss_pred EEEEEEeeC----CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCC
Q psy1859 16 TRCIKCFPN----KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDG 90 (162)
Q Consensus 16 ~~~i~~~~~----~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~ 90 (162)
-..++|+-+ ..++++|+.-|.|+| +|..+ .+....+.+|.. .|..+.++|.. +++++++.|.
T Consensus 92 fytcsw~yd~~~~~p~la~~G~~GvIrV--id~~~--~~~~~~~~ghG~---------sINeik~~p~~~qlvls~SkD~ 158 (385)
T KOG1034|consen 92 FYTCSWSYDSNTGNPFLAAGGYLGVIRV--IDVVS--GQCSKNYRGHGG---------SINEIKFHPDRPQLVLSASKDH 158 (385)
T ss_pred eEEEEEEecCCCCCeeEEeecceeEEEE--Eecch--hhhccceeccCc---------cchhhhcCCCCCcEEEEecCCc
Confidence 355667653 457888888899999 66655 444445556554 79999999987 8999999999
Q ss_pred eEEEEeCCCccceeeee---ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 91 YVNIWDGFNKKRLCQFH---RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~---~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
.|++|++++..++..+. +|...|.++ |+++|.++++++-|.+|++|++..+
T Consensus 159 svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 159 SVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVK 213 (385)
T ss_pred eEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChh
Confidence 99999999998887764 688999999 9999999999999999999999743
No 145
>KOG1445|consensus
Probab=99.66 E-value=3.9e-16 Score=110.07 Aligned_cols=133 Identities=19% Similarity=0.199 Sum_probs=101.7
Q ss_pred EeeCCCeEEE--EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEEEEeC
Q psy1859 21 CFPNKQGYVL--SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIWDG 97 (162)
Q Consensus 21 ~~~~~~~l~~--~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~wd~ 97 (162)
|+.+..++++ ++..|.|.|+.++... .-..-.+.+-. ....|+.+.|.|.. ..|++++.||.|++|.+
T Consensus 587 fcan~~rvAVPL~g~gG~iai~el~~PG--rLPDgv~p~l~-------Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~ 657 (1012)
T KOG1445|consen 587 FCANNKRVAVPLAGSGGVIAIYELNEPG--RLPDGVMPGLF-------NGTLVTDLHWDPFDDERLAVATDDGQINLWRL 657 (1012)
T ss_pred eeeccceEEEEecCCCceEEEEEcCCCC--CCCcccccccc-------cCceeeecccCCCChHHeeecccCceEEEEEe
Confidence 4444555544 4667899995554332 22221222211 11259999999976 89999999999999998
Q ss_pred CCc-------cceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 98 FNK-------KRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 98 ~~~-------~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..+ .+-..+..|...|+.+ |+| ....|++++.|.+|++||+++++....+.+|.+.|.+++||||
T Consensus 658 ~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpd 731 (1012)
T KOG1445|consen 658 TANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPD 731 (1012)
T ss_pred ccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCC
Confidence 764 3445677899999999 999 6678999999999999999999999999999999999999997
No 146
>KOG2096|consensus
Probab=99.66 E-value=3.1e-15 Score=97.73 Aligned_cols=136 Identities=18% Similarity=0.142 Sum_probs=101.8
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCc----ccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGP----EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
...+.+|+|+++++++.--.+++|..-..+ .....++.+++|.. +|..++|+|+...+++.+.||.+
T Consensus 232 ~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~s---------aV~~~aFsn~S~r~vtvSkDG~w 302 (420)
T KOG2096|consen 232 YDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQS---------AVLAAAFSNSSTRAVTVSKDGKW 302 (420)
T ss_pred cceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchh---------heeeeeeCCCcceeEEEecCCcE
Confidence 346799999999999999999997542211 11345566677665 89999999999999999999999
Q ss_pred EEEeCCCc-------cceeeee----ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec-cCCCceeEEEe
Q psy1859 93 NIWDGFNK-------KRLCQFH----RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSLCF 159 (162)
Q Consensus 93 ~~wd~~~~-------~~~~~~~----~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~ 159 (162)
++||..-. +.+++.. ...+....+ ++|+|+.|+.+ ....|+++..++++....++ .|...|.+|+|
T Consensus 303 riwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s-~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~ 381 (420)
T KOG2096|consen 303 RIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVS-FGSDLKVFASEDGKDYPELEDIHSTTISSISY 381 (420)
T ss_pred EEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEee-cCCceEEEEcccCccchhHHHhhcCceeeEEe
Confidence 99998631 2222221 123334467 99999988877 45589999999887665553 68899999999
Q ss_pred cCC
Q psy1859 160 SYD 162 (162)
Q Consensus 160 ~pd 162 (162)
+||
T Consensus 382 ~~~ 384 (420)
T KOG2096|consen 382 SSD 384 (420)
T ss_pred cCC
Confidence 985
No 147
>KOG0301|consensus
Probab=99.66 E-value=6.4e-15 Score=104.30 Aligned_cols=125 Identities=18% Similarity=0.246 Sum_probs=96.4
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+.+++..|++ .+++|+.|.+|++| .. .+...++.+|. +.|+++++-+++ .|++++.||.|++|
T Consensus 143 VWAv~~l~e~-~~vTgsaDKtIklW--k~----~~~l~tf~gHt---------D~VRgL~vl~~~-~flScsNDg~Ir~w 205 (745)
T KOG0301|consen 143 VWAVASLPEN-TYVTGSADKTIKLW--KG----GTLLKTFSGHT---------DCVRGLAVLDDS-HFLSCSNDGSIRLW 205 (745)
T ss_pred eeeeeecCCC-cEEeccCcceeeec--cC----Cchhhhhccch---------hheeeeEEecCC-CeEeecCCceEEEE
Confidence 3455555655 56777777777774 22 23344555554 479999998854 57899999999999
Q ss_pred eCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 96 DGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
++ ++..+.++.+|...++++ ..+++..++++++|++++||+.. .+.+.+....-.|+++++-
T Consensus 206 ~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L 268 (745)
T KOG0301|consen 206 DL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVL 268 (745)
T ss_pred ec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEe
Confidence 99 688999999999999999 88888899999999999999986 7777777555577777654
No 148
>KOG1523|consensus
Probab=99.65 E-value=4.3e-15 Score=96.86 Aligned_cols=142 Identities=13% Similarity=0.144 Sum_probs=113.1
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+..+|+|.+|++|+..++++-....+.||.....+ ..+...+++.|.. .|++++|+|..+.|++|+.|.
T Consensus 8 ~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~-~w~~~htls~Hd~---------~vtgvdWap~snrIvtcs~dr 77 (361)
T KOG1523|consen 8 RLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGAD-LWEPAHTLSEHDK---------IVTGVDWAPKSNRIVTCSHDR 77 (361)
T ss_pred eccCceeeeeecCCCceEEeccCCceEEEEEecCCC-CceeceehhhhCc---------ceeEEeecCCCCceeEccCCC
Confidence 456789999999999999999999999997665432 1445555555544 799999999999999999999
Q ss_pred eEEEEeCCC-c--cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee--e--eeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFN-K--KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR--L--CQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~-~--~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~--~--~~~~~~~~~v~~v~~~pd 162 (162)
.-++|...+ + ++...+..++..++++ |+|.+..+++|+....|.||-++...- + +.-..+.+.|+++.|+|+
T Consensus 78 nayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpn 157 (361)
T KOG1523|consen 78 NAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPN 157 (361)
T ss_pred CccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCC
Confidence 999999843 3 4555666788999999 999999999999999999998764321 1 122457788999999985
No 149
>KOG0649|consensus
Probab=99.65 E-value=7.9e-15 Score=92.70 Aligned_cols=134 Identities=14% Similarity=0.137 Sum_probs=97.5
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcc--cceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPE--MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
..+.+++..++|. ..+|++|+ ||.|+=|.|+.... ..+........... +.-....|.++-..|..+-++.++
T Consensus 59 qahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~--~~~evPeINam~ldP~enSi~~Ag 133 (325)
T KOG0649|consen 59 QAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQV--DAVEVPEINAMWLDPSENSILFAG 133 (325)
T ss_pred cccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCcccc--CcccCCccceeEeccCCCcEEEec
Confidence 4567888888888 34566654 59999999976432 12222221111100 001112588999999887777777
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
.|+.++-||+++|+..+++++|...+.++ -......+++|++||++++||.++++++..+.
T Consensus 134 GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie 195 (325)
T KOG0649|consen 134 GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIE 195 (325)
T ss_pred CCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEec
Confidence 99999999999999999999999999999 53444568899999999999999999888774
No 150
>KOG1524|consensus
Probab=99.65 E-value=1.6e-15 Score=105.09 Aligned_cols=135 Identities=17% Similarity=0.220 Sum_probs=104.2
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
+.+.+.+-.|+|+|.-|++++.||.|++|.-.. +.+.... ... .+|.|++|.|+.+.++-+. .+.
T Consensus 103 H~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG---MLRStl~--Q~~---------~~v~c~~W~p~S~~vl~c~-g~h 167 (737)
T KOG1524|consen 103 HAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG---MLRSTVV--QNE---------ESIRCARWAPNSNSIVFCQ-GGH 167 (737)
T ss_pred hhhhhhhcccCCCCceeeeecCCceEEEEeccc---hHHHHHh--hcC---------ceeEEEEECCCCCceEEec-CCe
Confidence 344455667999999999999999999964321 1221111 111 1699999999986655553 456
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.+=.+.....+-.++.|++-|.++ |++...++++|++|-..++||- .|..+..-..|.-+|++++|+||
T Consensus 168 ~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd 238 (737)
T KOG1524|consen 168 ISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFNPE 238 (737)
T ss_pred EEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhccceeeeeeccc
Confidence 7777777667777888999999999 9999999999999999999998 46666666778889999999986
No 151
>KOG2394|consensus
Probab=99.64 E-value=1.5e-15 Score=104.91 Aligned_cols=93 Identities=14% Similarity=0.130 Sum_probs=77.2
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
+.+...+|+|||++|++.+.||.++|++|+... ...+ ++..= +...|+.|||||++|++|+.|-.|.
T Consensus 291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~e--Llg~--mkSYF---------GGLLCvcWSPDGKyIvtGGEDDLVt 357 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQE--LLGV--MKSYF---------GGLLCVCWSPDGKYIVTGGEDDLVT 357 (636)
T ss_pred ccccceeEcCCCceEEEEecCceEEEeeccHHH--HHHH--HHhhc---------cceEEEEEcCCccEEEecCCcceEE
Confidence 456678899999999999999999998888644 2111 11111 1589999999999999999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQ 119 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~ 119 (162)
||.+..++.+..-.+|+++|..+ |+|
T Consensus 358 VwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 358 VWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred EEEeccceEEEeccccccceeeEeecc
Confidence 99999999999999999999999 883
No 152
>KOG2106|consensus
Probab=99.64 E-value=2.9e-14 Score=98.11 Aligned_cols=130 Identities=15% Similarity=0.209 Sum_probs=102.3
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
....++.+|+.+.+++++.|+.++||+ . .+..++.... +++.+++|+|.| .++.|+..|...+
T Consensus 370 elwgla~hps~~q~~T~gqdk~v~lW~--~----~k~~wt~~~~----------d~~~~~~fhpsg-~va~Gt~~G~w~V 432 (626)
T KOG2106|consen 370 ELWGLATHPSKNQLLTCGQDKHVRLWN--D----HKLEWTKIIE----------DPAECADFHPSG-VVAVGTATGRWFV 432 (626)
T ss_pred ceeeEEcCCChhheeeccCcceEEEcc--C----CceeEEEEec----------CceeEeeccCcc-eEEEeeccceEEE
Confidence 445688899999999999999999965 2 2333332211 268999999999 9999999999999
Q ss_pred EeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC-ceeeeee-ccCCCceeEEEecCC
Q psy1859 95 WDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN-KKRLCQF-HRYDTGITSLCFSYD 162 (162)
Q Consensus 95 wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~-~~~~~~v~~v~~~pd 162 (162)
.|.++...+..... ..+++++ |+|+|.+|+.|+.|+.|++|.+.. +...... ..+.++|+.+.||+|
T Consensus 433 ~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~D 502 (626)
T KOG2106|consen 433 LDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSD 502 (626)
T ss_pred EecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCC
Confidence 99998665555555 8889999 999999999999999999999864 3333332 234479999999987
No 153
>KOG0288|consensus
Probab=99.64 E-value=5.9e-15 Score=98.97 Aligned_cols=121 Identities=18% Similarity=0.236 Sum_probs=97.1
Q ss_pred eeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 7 RRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
...-++.+.++++..++++..+++++.|.++.+ +|.....-...+...+.. .....+.+.|||++.++++|
T Consensus 335 ~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~v--iDlRt~eI~~~~sA~g~k-------~asDwtrvvfSpd~~YvaAG 405 (459)
T KOG0288|consen 335 TRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKV--IDLRTKEIRQTFSAEGFK-------CASDWTRVVFSPDGSYVAAG 405 (459)
T ss_pred eeEeecCcceeeEeeccCCeEEeeecCCCceee--eecccccEEEEeeccccc-------cccccceeEECCCCceeeec
Confidence 344556788999999999999999999999999 555442233333333322 22248899999999999999
Q ss_pred cCCCeEEEEeCCCccceeeeeeccc--ceeEE-EcCCCCEEEEecCCCeEEEE
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDT--GITSL-FHQEYNTFATGGSDGYVNIW 136 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~--~v~~~-~~~~~~~l~~~~~d~~i~iw 136 (162)
+.||.|+||++.++++...+..... .|+++ |+|.|..+++++.++.+.+|
T Consensus 406 S~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 406 SADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred cCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 9999999999999998887775544 59999 99999999999999999998
No 154
>KOG0268|consensus
Probab=99.63 E-value=1.7e-15 Score=100.21 Aligned_cols=135 Identities=15% Similarity=0.158 Sum_probs=104.5
Q ss_pred ccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 14 FQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 14 ~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
..+.++.|+|. ...|++|..|+.|.|+|....+ ......+.. .-..|+|+|++-.|++++.|..+
T Consensus 188 Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~--Pl~KVi~~m------------RTN~IswnPeafnF~~a~ED~nl 253 (433)
T KOG0268|consen 188 DSISSVKFNPVETSILASCASDRSIVLYDLRQAS--PLKKVILTM------------RTNTICWNPEAFNFVAANEDHNL 253 (433)
T ss_pred CceeEEecCCCcchheeeeccCCceEEEecccCC--ccceeeeec------------cccceecCccccceeeccccccc
Confidence 45678899996 4567777899999996555444 322222222 24579999988889999999999
Q ss_pred EEEeCCC-ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec-cCCCceeEEEecCC
Q psy1859 93 NIWDGFN-KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~pd 162 (162)
+.+|++. ..++.....|.+.+.++ |+|.|+-+++|+.|.+|+||.++.+..-..+. -.-..|.+|.||-|
T Consensus 254 Y~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~D 326 (433)
T KOG0268|consen 254 YTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMD 326 (433)
T ss_pred eehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEecc
Confidence 9999998 46788888999999999 99999999999999999999998876544332 12246888888865
No 155
>KOG0290|consensus
Probab=99.63 E-value=7.7e-15 Score=94.76 Aligned_cols=126 Identities=16% Similarity=0.222 Sum_probs=91.8
Q ss_pred cccccEEEEEEeeCCC--e-EEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEe
Q psy1859 11 SLKFQTRCIKCFPNKQ--G-YVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATG 86 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~--~-l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~ 86 (162)
.+.++++.+.|.|+.. + =+.++.+..+++|..+..+........+..+... .+.+++++++|+.-. +++.++
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~~ee~~~~~~~~L~~~kns----~~~aPlTSFDWne~dp~~igtS 169 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIGDEESRVELQSVLNNNKNS----EFCAPLTSFDWNEVDPNLIGTS 169 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcccCeEEEEeccCcCCceehhhhhccCccc----ccCCcccccccccCCcceeEee
Confidence 5678889999999753 1 1223445678998887544223332233333222 256699999998865 889999
Q ss_pred cCCCeEEEEeCCCccc---eeeeeecccceeEE-EcCCC-CEEEEecCCCeEEEEeCCC
Q psy1859 87 GSDGYVNIWDGFNKKR---LCQFHRYDTGITSL-FHQEY-NTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~---~~~~~~~~~~v~~~-~~~~~-~~l~~~~~d~~i~iwd~~~ 140 (162)
+-|.+..+||++.+.. ...+-.|...|..+ |...+ +.+++.+.||.+|++|+|.
T Consensus 170 SiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~ 228 (364)
T KOG0290|consen 170 SIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRS 228 (364)
T ss_pred cccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecc
Confidence 9999999999998733 34555899999999 99855 4788899999999999985
No 156
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.63 E-value=9.4e-14 Score=93.34 Aligned_cols=139 Identities=14% Similarity=0.034 Sum_probs=95.6
Q ss_pred cEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCCCeE
Q psy1859 15 QTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSDGYV 92 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~~v 92 (162)
....++|+|+++.++++ ..++.+.+|+.+.. +....+..+.... ..-......++|+|+++.++ +...++.+
T Consensus 158 ~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~----~~~~~~~~~~~~~--~~~~~~~~~i~~s~dg~~~~~~~~~~~~i 231 (300)
T TIGR03866 158 RPRFAEFTADGKELWVSSEIGGTVSVIDVATR----KVIKKITFEIPGV--HPEAVQPVGIKLTKDGKTAFVALGPANRV 231 (300)
T ss_pred CccEEEECCCCCEEEEEcCCCCEEEEEEcCcc----eeeeeeeeccccc--ccccCCccceEECCCCCEEEEEcCCCCeE
Confidence 34568899999988655 45899999655432 2222211110000 00001245788999998754 44567789
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEe-cCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATG-GSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.+||+++++....+. +...+.++ |+|+|++|+++ ..++.|++||+++++.+..++.. ...++++|+|
T Consensus 232 ~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~ 300 (300)
T TIGR03866 232 AVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP 300 (300)
T ss_pred EEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence 999998877665543 34568888 99999999886 46899999999999998888754 5669999886
No 157
>KOG0307|consensus
Probab=99.63 E-value=7.4e-16 Score=113.84 Aligned_cols=137 Identities=18% Similarity=0.183 Sum_probs=102.2
Q ss_pred EEEEEeeCCCe----EEEEcCCCcEEEEEecCC--cccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCC
Q psy1859 17 RCIKCFPNKQG----YVLSSIEGRAAVEYLDTG--PEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSD 89 (162)
Q Consensus 17 ~~i~~~~~~~~----l~~~~~~g~i~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d 89 (162)
..++|.+.+.. ++.|..||.|.+|+-+.. ......+.... .|.+.|..++|++.+ ++|++|+.|
T Consensus 68 ~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~---------~h~G~V~gLDfN~~q~nlLASGa~~ 138 (1049)
T KOG0307|consen 68 NKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKS---------KHTGPVLGLDFNPFQGNLLASGADD 138 (1049)
T ss_pred eeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhc---------ccCCceeeeeccccCCceeeccCCC
Confidence 56899987766 777889999999655432 11111222222 266699999999987 699999999
Q ss_pred CeEEEEeCCCccceeeee--ecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCC--ceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFH--RYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT--GITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~--~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~v~~~pd 162 (162)
|.|.|||+.+-+.-.... .....|.++ |+. ....|++++.+|...|||+|.++.+-.+..+.+ .+..++|+||
T Consensus 139 geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~ 217 (1049)
T KOG0307|consen 139 GEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPD 217 (1049)
T ss_pred CcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCC
Confidence 999999999855444432 235678899 988 455788888999999999999887777765544 4778999996
No 158
>KOG0301|consensus
Probab=99.62 E-value=1.1e-14 Score=103.14 Aligned_cols=125 Identities=20% Similarity=0.335 Sum_probs=101.3
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+.|++...++. +++|++|.++++|... +....+.+|+. +|.+++.-|++ .+++|+.|..|+
T Consensus 102 snVC~ls~~~~~~-~iSgSWD~TakvW~~~------~l~~~l~gH~a---------sVWAv~~l~e~-~~vTgsaDKtIk 164 (745)
T KOG0301|consen 102 SNVCSLSIGEDGT-LISGSWDSTAKVWRIG------ELVYSLQGHTA---------SVWAVASLPEN-TYVTGSADKTIK 164 (745)
T ss_pred cceeeeecCCcCc-eEecccccceEEecch------hhhcccCCcch---------heeeeeecCCC-cEEeccCcceee
Confidence 3344444444555 8999999999997543 23333555554 89999999987 899999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEe
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 159 (162)
+|.- ++.++++.+|...|..+ +-+++ .+++++.||.|+.|++ ++.++.++.+|++.|++++.
T Consensus 165 lWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~ 227 (745)
T KOG0301|consen 165 LWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISM 227 (745)
T ss_pred eccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEe
Confidence 9986 68899999999999999 66654 4788889999999999 88999999999999999984
No 159
>KOG0290|consensus
Probab=99.61 E-value=3.4e-14 Score=91.85 Aligned_cols=140 Identities=16% Similarity=0.219 Sum_probs=102.3
Q ss_pred cccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecC
Q psy1859 11 SLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~ 88 (162)
....++++..|+. +-+++.+.+-|-+..||+++... .......+-. |...|..++|..++ ..|++.+.
T Consensus 148 ~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~-~~~vkTQLIA---------HDKEV~DIaf~~~s~~~FASvga 217 (364)
T KOG0290|consen 148 EFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGV-SGTVKTQLIA---------HDKEVYDIAFLKGSRDVFASVGA 217 (364)
T ss_pred ccCCcccccccccCCcceeEeecccCeEEEEEEeecc-ccceeeEEEe---------cCcceeEEEeccCccceEEEecC
Confidence 3445566777886 56788899999999998777541 0112222333 55579999999977 79999999
Q ss_pred CCeEEEEeCCCcc------------------------------------------------ceeeeeecccceeEE-EcC
Q psy1859 89 DGYVNIWDGFNKK------------------------------------------------RLCQFHRYDTGITSL-FHQ 119 (162)
Q Consensus 89 d~~v~~wd~~~~~------------------------------------------------~~~~~~~~~~~v~~~-~~~ 119 (162)
||.+++||++.-. ++.++++|.+.|..+ |.|
T Consensus 218 DGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaP 297 (364)
T KOG0290|consen 218 DGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAP 297 (364)
T ss_pred CCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecC
Confidence 9999999998321 233456788999999 999
Q ss_pred -CCCEEEEecCCCeEEEEeCCCce------eeeeeccCCCceeEEEecC
Q psy1859 120 -EYNTFATGGSDGYVNIWDGFNKK------RLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 120 -~~~~l~~~~~d~~i~iwd~~~~~------~~~~~~~~~~~v~~v~~~p 161 (162)
....+++++.|..+.+||+.+.. ++..+. -.+.|..+.|+|
T Consensus 298 hS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~ 345 (364)
T KOG0290|consen 298 HSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSS 345 (364)
T ss_pred CCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecc
Confidence 55689999999999999997532 222233 355789999985
No 160
>KOG2055|consensus
Probab=99.61 E-value=2.4e-14 Score=97.34 Aligned_cols=139 Identities=19% Similarity=0.181 Sum_probs=104.6
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
+.+.+..++|+.+++.|++++.+|.|.+|++. . ..+...+...... .-++++.++++.+||+|+..|.
T Consensus 343 ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~--~--~~~~~rf~D~G~v--------~gts~~~S~ng~ylA~GS~~Gi 410 (514)
T KOG2055|consen 343 IEGVVSDFTFSSDSKELLASGGTGEVYVWNLR--Q--NSCLHRFVDDGSV--------HGTSLCISLNGSYLATGSDSGI 410 (514)
T ss_pred eccEEeeEEEecCCcEEEEEcCCceEEEEecC--C--cceEEEEeecCcc--------ceeeeeecCCCceEEeccCcce
Confidence 55778889999999999999999988775544 4 2333333322211 2356777889999999999999
Q ss_pred EEEEeCCC------ccceeeeeecccceeEE-EcCCCCEEEEec--CCCeEEEEeCCCceeeeeecc---CCCceeEEEe
Q psy1859 92 VNIWDGFN------KKRLCQFHRYDTGITSL-FHQEYNTFATGG--SDGYVNIWDGFNKKRLCQFHR---YDTGITSLCF 159 (162)
Q Consensus 92 v~~wd~~~------~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~---~~~~v~~v~~ 159 (162)
|.|||.++ .+++..+..-...|+.+ |++++++|+.++ .+..+++-.+.+......+.. .-+.|+|++|
T Consensus 411 VNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aF 490 (514)
T KOG2055|consen 411 VNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAF 490 (514)
T ss_pred EEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEe
Confidence 99999764 36777777778899999 999999999887 456899888876655554432 2347899999
Q ss_pred cCC
Q psy1859 160 SYD 162 (162)
Q Consensus 160 ~pd 162 (162)
+|.
T Consensus 491 SP~ 493 (514)
T KOG2055|consen 491 SPN 493 (514)
T ss_pred cCC
Confidence 994
No 161
>KOG0303|consensus
Probab=99.60 E-value=1.7e-14 Score=96.46 Aligned_cols=97 Identities=21% Similarity=0.305 Sum_probs=85.3
Q ss_pred ccceeceEEEEecCCC-CEEEEecCCCeEEEEeCCCc-------cceeeeeecccceeEE-EcC-CCCEEEEecCCCeEE
Q psy1859 65 IEKIYPVNAISFHQEY-NTFATGGSDGYVNIWDGFNK-------KRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVN 134 (162)
Q Consensus 65 ~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~-------~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~ 134 (162)
.+|.++|..++|+|.. +.|++|+.|.+|.+|++..+ +++..+.+|...|..+ |+| ..+.|++++.|++|.
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~ 157 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVS 157 (472)
T ss_pred cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEE
Confidence 3577799999999976 88999999999999998764 4566788999999999 999 456889999999999
Q ss_pred EEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 135 IWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 135 iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+||+.+|+.+.++. |.+-|++++|+.|
T Consensus 158 iWnv~tgeali~l~-hpd~i~S~sfn~d 184 (472)
T KOG0303|consen 158 IWNVGTGEALITLD-HPDMVYSMSFNRD 184 (472)
T ss_pred EEeccCCceeeecC-CCCeEEEEEeccC
Confidence 99999999888887 9999999999865
No 162
>KOG1009|consensus
Probab=99.60 E-value=6.7e-15 Score=98.49 Aligned_cols=125 Identities=13% Similarity=0.117 Sum_probs=101.1
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCC------c------ccceeeeeeeeeeeccCcccceeceEEEEe
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTG------P------EMQKMKYAFKCHRIKEDGIEKIYPVNAISF 76 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 76 (162)
.+.+...+.++.|+|+|+.|++|+++|.+.+|..... + ........+.+ |...+..++|
T Consensus 61 Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~---------h~~diydL~W 131 (434)
T KOG1009|consen 61 LSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRG---------HRDDIYDLAW 131 (434)
T ss_pred ccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecc---------cccchhhhhc
Confidence 3445566788899999999999999999999876510 0 11222333334 4447999999
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 77 HQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 77 ~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
+|+++.+++++.|..+++||+..|+....+..|...+..+ |.|.++++++-+.|...+++.+...+
T Consensus 132 s~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~ 198 (434)
T KOG1009|consen 132 SPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQ 198 (434)
T ss_pred cCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeee
Confidence 9999999999999999999999999999999999999999 99999999999999877777765443
No 163
>KOG2110|consensus
Probab=99.60 E-value=1.7e-13 Score=90.94 Aligned_cols=127 Identities=20% Similarity=0.232 Sum_probs=95.2
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe--cCCCeEEEEeCCCccc
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG--GSDGYVNIWDGFNKKR 102 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~--~~d~~v~~wd~~~~~~ 102 (162)
.++|+++-.+. |.| +|.+. .+...++...+. +...+.++.+++.+.+++-- ...|.|.+||+.+-++
T Consensus 97 r~RLvV~Lee~-IyI--ydI~~--MklLhTI~t~~~------n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~ 165 (391)
T KOG2110|consen 97 RKRLVVCLEES-IYI--YDIKD--MKLLHTIETTPP------NPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQP 165 (391)
T ss_pred cceEEEEEccc-EEE--Eeccc--ceeehhhhccCC------CccceEeeccCCCCceEEecCCCCCceEEEEEccccee
Confidence 45666665554 777 55544 444444433311 22256677667666677753 3469999999999999
Q ss_pred eeeeeecccceeEE-EcCCCCEEEEecCCCe-EEEEeCCCceeeeeeccC--CCceeEEEecCC
Q psy1859 103 LCQFHRYDTGITSL-FHQEYNTFATGGSDGY-VNIWDGFNKKRLCQFHRY--DTGITSLCFSYD 162 (162)
Q Consensus 103 ~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~--~~~v~~v~~~pd 162 (162)
+..+..|++.+.++ |+++|.++||+++.|+ |||+.+.+|+.+..+..- ...|.+++|+||
T Consensus 166 v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~d 229 (391)
T KOG2110|consen 166 VNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPD 229 (391)
T ss_pred eeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCC
Confidence 99999999999999 9999999999999987 599999999988887632 346899999986
No 164
>KOG0268|consensus
Probab=99.60 E-value=5.5e-15 Score=97.84 Aligned_cols=138 Identities=21% Similarity=0.290 Sum_probs=98.8
Q ss_pred eccccccEEEEEEeeCC-CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 9 ESSLKFQTRCIKCFPNK-QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~-~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
...+...+.|++=+|.. ..+++|+.||.|+||+.. + ......+.+|.. .|.++.++. ..+++++
T Consensus 62 L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnls--q--R~~~~~f~AH~G---------~V~Gi~v~~--~~~~tvg 126 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLS--Q--RECIRTFKAHEG---------LVRGICVTQ--TSFFTVG 126 (433)
T ss_pred ccccccccchhhcCcchhhhhhccccCceEEEEehh--h--hhhhheeecccC---------ceeeEEecc--cceEEec
Confidence 35566677888888876 678999999999995544 3 456667777665 688888876 5677888
Q ss_pred CCCeEEEEeCC--------------------------------------CccceeeeeecccceeEE-EcC-CCCEEEEe
Q psy1859 88 SDGYVNIWDGF--------------------------------------NKKRLCQFHRYDTGITSL-FHQ-EYNTFATG 127 (162)
Q Consensus 88 ~d~~v~~wd~~--------------------------------------~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~ 127 (162)
.|.+|+.|.+. ...++..+.-....+.++ |+| ....|+++
T Consensus 127 dDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~ 206 (433)
T KOG0268|consen 127 DDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASC 206 (433)
T ss_pred CCcceeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeee
Confidence 88877777632 222333333334467788 999 44577777
Q ss_pred cCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 128 GSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 128 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|+.|.+||++++.+++.+. -...-+.|+|+|+
T Consensus 207 ~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPe 240 (433)
T KOG0268|consen 207 ASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPE 240 (433)
T ss_pred ccCCceEEEecccCCccceee-eeccccceecCcc
Confidence 899999999999998877664 2345577888883
No 165
>KOG1539|consensus
Probab=99.59 E-value=3.2e-14 Score=102.69 Aligned_cols=128 Identities=14% Similarity=0.121 Sum_probs=98.3
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCccccee-----eeeeeeeee-----------------------cc
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKM-----KYAFKCHRI-----------------------KE 62 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~-----~~~~~~~~~-----------------------~~ 62 (162)
.+++.++.++..--++.+++++.+|.+.+|++......... ..-...|+. -+
T Consensus 491 ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR 570 (910)
T KOG1539|consen 491 AHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVR 570 (910)
T ss_pred cccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhH
Confidence 46778888888888888999999999999887654311000 000001111 11
Q ss_pred CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC-CeEEEEeCC
Q psy1859 63 DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD-GYVNIWDGF 139 (162)
Q Consensus 63 ~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d-~~i~iwd~~ 139 (162)
...+|...+++++|||+|+.+++++.|++|++||+.++.++-.+. -..+.+.+ |+|+|++|+|...| .-|++|.=+
T Consensus 571 ~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 571 EFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK 648 (910)
T ss_pred HhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence 345688899999999999999999999999999999998887664 46778889 99999999999988 679999744
No 166
>KOG2048|consensus
Probab=99.58 E-value=1.9e-13 Score=96.68 Aligned_cols=141 Identities=23% Similarity=0.289 Sum_probs=105.2
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
....+.+.+++.+|.+..++.|++||.+.. ++... .+..+.-.-.+ ..++|.+++|+|++..+++|+.|
T Consensus 107 d~~gg~IWsiai~p~~~~l~IgcddGvl~~--~s~~p--~~I~~~r~l~r-------q~sRvLslsw~~~~~~i~~Gs~D 175 (691)
T KOG2048|consen 107 DSNGGAIWSIAINPENTILAIGCDDGVLYD--FSIGP--DKITYKRSLMR-------QKSRVLSLSWNPTGTKIAGGSID 175 (691)
T ss_pred cCCCcceeEEEeCCccceEEeecCCceEEE--EecCC--ceEEEEeeccc-------ccceEEEEEecCCccEEEecccC
Confidence 345577899999999999999999995544 55443 22222211111 12379999999999999999999
Q ss_pred CeEEEEeCCCccceeeee-----e---cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 90 GYVNIWDGFNKKRLCQFH-----R---YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~-----~---~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
|.|++||..++..+.... . ...-+.++ |-.++ .+++|+..|+|++||...+..++.+..|...|.+++.+
T Consensus 176 g~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~ 254 (691)
T KOG2048|consen 176 GVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVA 254 (691)
T ss_pred ceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEc
Confidence 999999999987665222 1 12234555 44444 68999999999999999999999888999999999877
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
++
T Consensus 255 ~~ 256 (691)
T KOG2048|consen 255 DN 256 (691)
T ss_pred CC
Confidence 64
No 167
>KOG1188|consensus
Probab=99.58 E-value=7e-14 Score=91.95 Aligned_cols=140 Identities=20% Similarity=0.329 Sum_probs=101.2
Q ss_pred ccccEEEEEEee--CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec--
Q psy1859 12 LKFQTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-- 87 (162)
Q Consensus 12 ~~~~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-- 87 (162)
.+.++..+.|.. ....+.+|+.||+|++|+..... ....+....++.. +..+++.+-.++++++|+
T Consensus 69 ~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~--e~a~~~~~~~~~~--------~f~~ld~nck~~ii~~GtE~ 138 (376)
T KOG1188|consen 69 PPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQA--ESARISWTQQSGT--------PFICLDLNCKKNIIACGTEL 138 (376)
T ss_pred CCCcccceEEecCCCCCeeEEeccCCeEEEEEeecch--hhhheeccCCCCC--------cceEeeccCcCCeEEecccc
Confidence 445556677665 46678999999999998777655 3344444444422 678888877778888875
Q ss_pred --CCCeEEEEeCCCccc-eeee-eecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCcee---eeeeccCCCceeEEE
Q psy1859 88 --SDGYVNIWDGFNKKR-LCQF-HRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKR---LCQFHRYDTGITSLC 158 (162)
Q Consensus 88 --~d~~v~~wd~~~~~~-~~~~-~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~v~ 158 (162)
.+-.|.+||+|..+. +..+ ..|...|+++ |+| +..+|++|+-||.+.++|++.... +.....|.+.|..+.
T Consensus 139 ~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~ig 218 (376)
T KOG1188|consen 139 TRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIG 218 (376)
T ss_pred ccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeee
Confidence 367899999998765 5444 4688999999 999 778999999999999999975431 222224666677777
Q ss_pred ecC
Q psy1859 159 FSY 161 (162)
Q Consensus 159 ~~p 161 (162)
|..
T Consensus 219 w~~ 221 (376)
T KOG1188|consen 219 WLS 221 (376)
T ss_pred eec
Confidence 753
No 168
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.58 E-value=2.9e-13 Score=90.96 Aligned_cols=121 Identities=12% Similarity=0.119 Sum_probs=88.1
Q ss_pred CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE-EEecCCCeEEEEeCCCcccee
Q psy1859 26 QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-ATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 26 ~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d~~v~~wd~~~~~~~~ 104 (162)
+.+++++.|+.+.+|+.+ + .+....+..+. .+.+++|+|++..+ ++++.++.|++||..+++...
T Consensus 2 ~~~~s~~~d~~v~~~d~~--t--~~~~~~~~~~~----------~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 67 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTA--T--LEVTRTFPVGQ----------RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIG 67 (300)
T ss_pred cEEEEecCCCEEEEEECC--C--CceEEEEECCC----------CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEE
Confidence 567888999999996554 3 23333333332 36789999999765 567789999999999887776
Q ss_pred eeeecccceeEE-EcCCCCEEEEe-cCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 105 QFHRYDTGITSL-FHQEYNTFATG-GSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 105 ~~~~~~~~v~~~-~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+..+. .+..+ |+|+++.++++ ..++.+++||+++++.+..+.. ...+.+++|+||
T Consensus 68 ~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~d 125 (300)
T TIGR03866 68 TLPSGP-DPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPD 125 (300)
T ss_pred eccCCC-CccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCC
Confidence 665433 34567 99999977655 5689999999998887776653 334677888876
No 169
>KOG0322|consensus
Probab=99.57 E-value=3.1e-14 Score=90.85 Aligned_cols=131 Identities=15% Similarity=0.224 Sum_probs=97.2
Q ss_pred EEEEcCCCcEEEEEecCCcccceeeeeeeeeee-ccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCc--cc-e
Q psy1859 28 YVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRI-KEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNK--KR-L 103 (162)
Q Consensus 28 l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~--~~-~ 103 (162)
+++|..+|.+.+|+....+ .+..++.... ...-..|..+|.++.+.+....=++|+.+..+..|.+... .+ +
T Consensus 168 llaGyEsghvv~wd~S~~~----~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~ 243 (323)
T KOG0322|consen 168 LLAGYESGHVVIWDLSTGD----KIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQI 243 (323)
T ss_pred EEEeccCCeEEEEEccCCc----eeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccc
Confidence 5566778999997776542 2222222111 1112236668999999987666678888888999988753 22 1
Q ss_pred -eeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 104 -CQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 104 -~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..+.-.+..+..+ +.||++.++|++.|+.||||..++.+++..++.|...|++++|+||
T Consensus 244 ~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd 304 (323)
T KOG0322|consen 244 RKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPD 304 (323)
T ss_pred cceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCC
Confidence 1223345667778 9999999999999999999999999999999999999999999997
No 170
>KOG2048|consensus
Probab=99.57 E-value=5.3e-13 Score=94.52 Aligned_cols=138 Identities=14% Similarity=0.179 Sum_probs=110.8
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
+..|.+++++.+.+.||++-.+|.|.||..... .-....+.++... .|.+++|++ +..|.+.+.+|.|
T Consensus 25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~---w~~~~vi~g~~dr--------sIE~L~W~e-~~RLFS~g~sg~i 92 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNN---WFLEPVIHGPEDR--------SIESLAWAE-GGRLFSSGLSGSI 92 (691)
T ss_pred ccceEEEEEeccCCceeeeccCCcEEEEccCCC---ceeeEEEecCCCC--------ceeeEEEcc-CCeEEeecCCceE
Confidence 456789999999999999999999999665532 3333344454433 699999996 4566688889999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee--eccCCCceeEEEecCC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ--FHRYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~v~~v~~~pd 162 (162)
.-||+.++++...+....+.+.++ .+|.+..++.|++||.+...+...++.... +...++.|.+++|+|+
T Consensus 93 ~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~ 165 (691)
T KOG2048|consen 93 TEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPT 165 (691)
T ss_pred EEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCC
Confidence 999999999999999999999999 999999999999999888888877765332 2234578999999985
No 171
>KOG1034|consensus
Probab=99.56 E-value=5.7e-13 Score=87.45 Aligned_cols=141 Identities=13% Similarity=0.112 Sum_probs=103.0
Q ss_pred ccEEEEEEee----CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC----CCEEEE
Q psy1859 14 FQTRCIKCFP----NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE----YNTFAT 85 (162)
Q Consensus 14 ~~~~~i~~~~----~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~l~~ 85 (162)
.++..++|++ +...+++......+.+|...... .... +.....+ .|......++|+-+ ..++++
T Consensus 39 ~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~--~ir~--lq~y~D~----d~~Esfytcsw~yd~~~~~p~la~ 110 (385)
T KOG1034|consen 39 KPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDG--GIRL--LQSYADE----DHDESFYTCSWSYDSNTGNPFLAA 110 (385)
T ss_pred CccceeeeehhcCCCCCceEEEeCCcEEEEEEECCcc--ceee--eeeccCC----CCCcceEEEEEEecCCCCCeeEEe
Confidence 4456677774 22233333444567775544332 1111 1111110 14446778888553 368889
Q ss_pred ecCCCeEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeee---ccCCCceeEEEec
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQF---HRYDTGITSLCFS 160 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~v~~~ 160 (162)
++.-|.|++.|+.+++....+.+|+..|..+ ++| +.+++++++.|..|++|++++..++..+ .+|.+.|.++.|+
T Consensus 111 ~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~ 190 (385)
T KOG1034|consen 111 GGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFS 190 (385)
T ss_pred ecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEc
Confidence 9999999999999999999999999999999 999 5579999999999999999999998887 5799999999999
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
+|
T Consensus 191 ~~ 192 (385)
T KOG1034|consen 191 LD 192 (385)
T ss_pred CC
Confidence 75
No 172
>KOG0322|consensus
Probab=99.54 E-value=3.4e-14 Score=90.65 Aligned_cols=122 Identities=11% Similarity=0.202 Sum_probs=98.2
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
....++.++.++.+.+....=+.|+.+..+..|.++-..+..+........+. .|..+..-||++.+++++
T Consensus 200 ~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknp---------Gv~gvrIRpD~KIlATAG 270 (323)
T KOG0322|consen 200 PNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNP---------GVSGVRIRPDGKILATAG 270 (323)
T ss_pred chhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCC---------CccceEEccCCcEEeecc
Confidence 34556777888888877666677777778888777655432332222222111 588999999999999999
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
.|+.+++|.-++..++..++-|...+.++ |+|+..+++.++.|++|.+|++
T Consensus 271 WD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 271 WDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred cCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 99999999999999999999999999999 9999999999999999999986
No 173
>KOG0642|consensus
Probab=99.53 E-value=2.4e-13 Score=94.47 Aligned_cols=150 Identities=15% Similarity=0.161 Sum_probs=109.9
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..++++|-|+++.+++..+++|+.||+|+.|..-++. ..--.+ ..........+|.+.|..+++|+....|++++.|
T Consensus 341 raH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~-dp~ds~--dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~D 417 (577)
T KOG0642|consen 341 RAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQ-DPDDSY--DPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSD 417 (577)
T ss_pred ecccCceEEEEecCCceEEEeeccCceeeeeccCCCC-Cccccc--CcchhccceeccccceeeeeecccccceeeecCC
Confidence 3467899999999999999999999999997554211 000000 0001111123466689999999998899999999
Q ss_pred CeEEEEeCCCccce--e------------------------------------------eeee-------cccceeEE-E
Q psy1859 90 GYVNIWDGFNKKRL--C------------------------------------------QFHR-------YDTGITSL-F 117 (162)
Q Consensus 90 ~~v~~wd~~~~~~~--~------------------------------------------~~~~-------~~~~v~~~-~ 117 (162)
|++++|+.....++ . .+.. ....+..+ +
T Consensus 418 gTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs 497 (577)
T KOG0642|consen 418 GTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVS 497 (577)
T ss_pred ceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEe
Confidence 99999987644320 0 0000 01133455 8
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 118 HQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 118 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+|.+.+.+++..|+.|+++|..+++.+.....|...++++++.|+
T Consensus 498 ~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~n 542 (577)
T KOG0642|consen 498 HPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPN 542 (577)
T ss_pred cCCCCeeEecccCCceecccccccccchheeeccceecceeecCC
Confidence 888999999999999999999999999999999999999999874
No 174
>KOG2445|consensus
Probab=99.53 E-value=1.1e-12 Score=85.44 Aligned_cols=142 Identities=11% Similarity=0.099 Sum_probs=98.0
Q ss_pred ccccEEEEEEee--CCCeEEEEcCCCcEEEEEecCCccc-----ceeeeeeeeeeeccCcccceeceEEEEecCC--CCE
Q psy1859 12 LKFQTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPEM-----QKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNT 82 (162)
Q Consensus 12 ~~~~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~ 82 (162)
+.+.+-.|.|-+ -|+.+++++.|+++.||.=+..+.. .....++...+ ..|+.+.|.|. |-.
T Consensus 58 h~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~Dsr---------ssV~DV~FaP~hlGLk 128 (361)
T KOG2445|consen 58 HDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSR---------SSVTDVKFAPKHLGLK 128 (361)
T ss_pred cCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCC---------cceeEEEecchhcceE
Confidence 345566678754 3899999999999999654322211 11222222222 27999999996 578
Q ss_pred EEEecCCCeEEEEeCCCc------cceeeee-------ecccceeEE-EcC---CCCEEEEecCC-----CeEEEEeCCC
Q psy1859 83 FATGGSDGYVNIWDGFNK------KRLCQFH-------RYDTGITSL-FHQ---EYNTFATGGSD-----GYVNIWDGFN 140 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~------~~~~~~~-------~~~~~v~~~-~~~---~~~~l~~~~~d-----~~i~iwd~~~ 140 (162)
+++++.||.++||+.-.. .++.++. .+.....|+ |+| ...+++.|+.+ +.++||....
T Consensus 129 lA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e 208 (361)
T KOG2445|consen 129 LAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNE 208 (361)
T ss_pred EEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecC
Confidence 999999999999977542 3333333 345567788 987 45578888655 4788887653
Q ss_pred c----eeeeeeccCCCceeEEEecCC
Q psy1859 141 K----KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 141 ~----~~~~~~~~~~~~v~~v~~~pd 162 (162)
. ..+.++..|.++|++|+|+|+
T Consensus 209 ~~rKw~kva~L~d~~dpI~di~wAPn 234 (361)
T KOG2445|consen 209 NGRKWLKVAELPDHTDPIRDISWAPN 234 (361)
T ss_pred CcceeeeehhcCCCCCcceeeeeccc
Confidence 3 246667799999999999995
No 175
>KOG0321|consensus
Probab=99.53 E-value=8.5e-14 Score=98.06 Aligned_cols=121 Identities=20% Similarity=0.213 Sum_probs=86.2
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~ 90 (162)
+.+.+..+.|-|....|++++.|.++++|+..... ......+.+ |.+.|.+++|+|.. ..|++|+.||
T Consensus 99 H~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~--l~G~~~~~G---------H~~SvkS~cf~~~n~~vF~tGgRDg 167 (720)
T KOG0321|consen 99 HKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR--LVGGRLNLG---------HTGSVKSECFMPTNPAVFCTGGRDG 167 (720)
T ss_pred ccceeEeeccCCCceeEEEccCCceeeeeeeccce--eecceeecc---------cccccchhhhccCCCcceeeccCCC
Confidence 45667789999966788999999999997665543 222222334 55589999999987 7899999999
Q ss_pred eEEEEeCCCcc--------------------c-------eeeeeecccceeE----EEcCCCCEEEEecC-CCeEEEEeC
Q psy1859 91 YVNIWDGFNKK--------------------R-------LCQFHRYDTGITS----LFHQEYNTFATGGS-DGYVNIWDG 138 (162)
Q Consensus 91 ~v~~wd~~~~~--------------------~-------~~~~~~~~~~v~~----~~~~~~~~l~~~~~-d~~i~iwd~ 138 (162)
.+.|||++-.. + +.....+...+.. ++..|...|++++. |+.|+|||+
T Consensus 168 ~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDL 247 (720)
T KOG0321|consen 168 EILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDL 247 (720)
T ss_pred cEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEee
Confidence 99999997321 0 1111222333333 35567788888886 999999999
Q ss_pred CCcee
Q psy1859 139 FNKKR 143 (162)
Q Consensus 139 ~~~~~ 143 (162)
++...
T Consensus 248 Rk~~~ 252 (720)
T KOG0321|consen 248 RKNYT 252 (720)
T ss_pred ccccc
Confidence 97643
No 176
>KOG1523|consensus
Probab=99.53 E-value=1.8e-13 Score=89.45 Aligned_cols=143 Identities=15% Similarity=0.144 Sum_probs=105.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
+.+...++.|.|+|..+.+++++.|...+||..- ..+..+....+.-++. +++++.|+|.++.|++|+.-
T Consensus 52 s~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~-~~~~WkptlvLlRiNr---------AAt~V~WsP~enkFAVgSga 121 (361)
T KOG1523|consen 52 SEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQP-SGGTWKPTLVLLRINR---------AATCVKWSPKENKFAVGSGA 121 (361)
T ss_pred hhhCcceeEEeecCCCCceeEccCCCCccccccC-CCCeeccceeEEEecc---------ceeeEeecCcCceEEeccCc
Confidence 4455677889999999999999999999997652 2223555444444433 79999999999999999999
Q ss_pred CeEEEEeCCCccce---e-eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCC-----C-------------ceeeee
Q psy1859 90 GYVNIWDGFNKKRL---C-QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF-----N-------------KKRLCQ 146 (162)
Q Consensus 90 ~~v~~wd~~~~~~~---~-~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~-----~-------------~~~~~~ 146 (162)
..|.+|-++...-- + .-+.+.+.|+++ |+|++-+|++|+.|+..+|+..- . |..+..
T Consensus 122 r~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E 201 (361)
T KOG1523|consen 122 RLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSE 201 (361)
T ss_pred cEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHh
Confidence 99999988764321 1 112457889999 99999999999999999998632 1 112333
Q ss_pred eccCCCceeEEEecCC
Q psy1859 147 FHRYDTGITSLCFSYD 162 (162)
Q Consensus 147 ~~~~~~~v~~v~~~pd 162 (162)
+..-.+.|..+.|+|+
T Consensus 202 ~~~~ggwvh~v~fs~s 217 (361)
T KOG1523|consen 202 ASSSGGWVHGVLFSPS 217 (361)
T ss_pred hccCCCceeeeEeCCC
Confidence 3334567888888864
No 177
>KOG4378|consensus
Probab=99.52 E-value=5.5e-13 Score=91.95 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=106.4
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEec
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGG 87 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~ 87 (162)
...++..|+++.++-...++++++..|.|.| ....+ .....+|..... ..|.-+.|+|.. .+|.+++
T Consensus 117 lkdh~stvt~v~YN~~DeyiAsvs~gGdiii--h~~~t--~~~tt~f~~~sg--------qsvRll~ys~skr~lL~~as 184 (673)
T KOG4378|consen 117 LKDHQSTVTYVDYNNTDEYIASVSDGGDIII--HGTKT--KQKTTTFTIDSG--------QSVRLLRYSPSKRFLLSIAS 184 (673)
T ss_pred ccCCcceeEEEEecCCcceeEEeccCCcEEE--Eeccc--CccccceecCCC--------CeEEEeecccccceeeEeec
Confidence 3445566788889998999999999999999 44443 222223332211 157899999987 5666889
Q ss_pred CCCeEEEEeCCCccceeee-eecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 88 SDGYVNIWDGFNKKRLCQF-HRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+|.|.+||+....++..+ ..|..+...+ |+| +..++++.+-|..|.+||.+..+....+. ...+...++|+++
T Consensus 185 d~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~ 261 (673)
T KOG4378|consen 185 DKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSEC 261 (673)
T ss_pred cCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeecCC
Confidence 9999999999987776655 4678888888 999 66688899999999999999877666664 3447788888875
No 178
>KOG1272|consensus
Probab=99.51 E-value=2.5e-14 Score=97.46 Aligned_cols=120 Identities=20% Similarity=0.231 Sum_probs=98.9
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+..+.|-|..-.|++++..|.++- .|... .+.+..+..... .+..+.-+|.+..+-+|..+|+|.+|
T Consensus 212 v~rLeFLPyHfLL~~~~~~G~L~Y--~DVS~--GklVa~~~t~~G---------~~~vm~qNP~NaVih~GhsnGtVSlW 278 (545)
T KOG1272|consen 212 VARLEFLPYHFLLVAASEAGFLKY--QDVST--GKLVASIRTGAG---------RTDVMKQNPYNAVIHLGHSNGTVSLW 278 (545)
T ss_pred hhhhcccchhheeeecccCCceEE--Eeech--hhhhHHHHccCC---------ccchhhcCCccceEEEcCCCceEEec
Confidence 445678888777888888898886 56655 444444333322 57888889999999999999999999
Q ss_pred eCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 96 DGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
.....+++..+.+|.++|.++ ++++|+|++|++.|..++|||++....++++.
T Consensus 279 SP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~ 332 (545)
T KOG1272|consen 279 SPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYR 332 (545)
T ss_pred CCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceee
Confidence 999999999999999999999 99999999999999999999999877655554
No 179
>KOG1063|consensus
Probab=99.51 E-value=5.2e-13 Score=94.90 Aligned_cols=141 Identities=16% Similarity=0.281 Sum_probs=99.8
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
+...|+.++||||+++|++.+.|.++.+|.... + ....+.+.. .+.|..-|-+++|+|++.+|+|+++|..
T Consensus 571 HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~-~--~~~e~~fa~------~k~HtRIIWdcsW~pde~~FaTaSRDK~ 641 (764)
T KOG1063|consen 571 HSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQE-D--IKDEFRFAC------LKAHTRIIWDCSWSPDEKYFATASRDKK 641 (764)
T ss_pred cceEEEEEEECCCCcEEEEeecCceEEeeeeec-c--cchhhhhcc------ccccceEEEEcccCcccceeEEecCCce
Confidence 445578899999999999999999999965522 1 112222211 2336668999999999999999999999
Q ss_pred EEEEeCCCc--cceeee--eecccceeEE-EcC-----CCCEEEEecCCCeEEEEeCCC-------ce--e---eeeecc
Q psy1859 92 VNIWDGFNK--KRLCQF--HRYDTGITSL-FHQ-----EYNTFATGGSDGYVNIWDGFN-------KK--R---LCQFHR 149 (162)
Q Consensus 92 v~~wd~~~~--~~~~~~--~~~~~~v~~~-~~~-----~~~~l~~~~~d~~i~iwd~~~-------~~--~---~~~~~~ 149 (162)
|.+|..... +.+..+ ..+...++.+ +.| .+..++.|-+.|.|.+|.... +. . ......
T Consensus 642 VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 721 (764)
T KOG1063|consen 642 VKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIG 721 (764)
T ss_pred EEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccC
Confidence 999998876 444432 2456778877 555 233778888999999999641 11 1 111124
Q ss_pred CCCceeEEEecC
Q psy1859 150 YDTGITSLCFSY 161 (162)
Q Consensus 150 ~~~~v~~v~~~p 161 (162)
|.+.|+.+.|.|
T Consensus 722 ~~~aV~rl~w~p 733 (764)
T KOG1063|consen 722 PDSAVNRLLWRP 733 (764)
T ss_pred hHHhhheeEecc
Confidence 667888888886
No 180
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.50 E-value=5.6e-12 Score=87.53 Aligned_cols=139 Identities=22% Similarity=0.315 Sum_probs=106.7
Q ss_pred eccccccEEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCC-EEEEe
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN-TFATG 86 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~~ 86 (162)
.......+..++++|+++.++.++. ++.+++|+... ......+.+|. ..|.+++|+|++. .++++
T Consensus 151 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~ 217 (466)
T COG2319 151 LEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT----GKPLSTLAGHT---------DPVSSLAFSPDGGLLIASG 217 (466)
T ss_pred EecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC----CceEEeeccCC---------CceEEEEEcCCcceEEEEe
Confidence 3445566778999999998888875 99999965543 23333334433 3799999999987 55555
Q ss_pred cCCCeEEEEeCCCcccee-eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee-eeeeccCCCceeEEEecC
Q psy1859 87 GSDGYVNIWDGFNKKRLC-QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR-LCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~-~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~v~~~p 161 (162)
+.|+.+.+||...+..+. .+..|.... .. |+|++.++++++.|+.+++|+++.... +..+..|...+.++.|.|
T Consensus 218 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 294 (466)
T COG2319 218 SSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSP 294 (466)
T ss_pred cCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECC
Confidence 999999999988777766 577776665 44 999998999999999999999986664 444467888999999987
No 181
>KOG1538|consensus
Probab=99.48 E-value=1.3e-12 Score=93.19 Aligned_cols=133 Identities=20% Similarity=0.293 Sum_probs=97.3
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
-+..++|-|||..++.+..+. +.+ +|++. .....++++|.. .|.+++|+.+|+.|++|+.|..|.+
T Consensus 14 ci~d~afkPDGsqL~lAAg~r-lli--yD~nd--G~llqtLKgHKD---------tVycVAys~dGkrFASG~aDK~VI~ 79 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGSR-LLV--YDTSD--GTLLQPLKGHKD---------TVYCVAYAKDGKRFASGSADKSVII 79 (1081)
T ss_pred chheeEECCCCceEEEecCCE-EEE--EeCCC--cccccccccccc---------eEEEEEEccCCceeccCCCceeEEE
Confidence 467799999999988876553 445 77766 566677777765 7999999999999999999999999
Q ss_pred EeCCCccc--------ee--ee-------------------------eecc--cceeEE-EcCCCCEEEEecCCCeEEEE
Q psy1859 95 WDGFNKKR--------LC--QF-------------------------HRYD--TGITSL-FHQEYNTFATGGSDGYVNIW 136 (162)
Q Consensus 95 wd~~~~~~--------~~--~~-------------------------~~~~--~~v~~~-~~~~~~~l~~~~~d~~i~iw 136 (162)
|+.+-... ++ .+ ..+. ..+.++ |..||++++.|-.+|+|.+-
T Consensus 80 W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiR 159 (1081)
T KOG1538|consen 80 WTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIR 159 (1081)
T ss_pred ecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEee
Confidence 98653210 00 00 0111 234555 99999999999999999998
Q ss_pred eCCCceeeeeec---cCCCceeEEEecCC
Q psy1859 137 DGFNKKRLCQFH---RYDTGITSLCFSYD 162 (162)
Q Consensus 137 d~~~~~~~~~~~---~~~~~v~~v~~~pd 162 (162)
+- +++....++ +..++|++++|+|.
T Consensus 160 Nk-~gEek~~I~Rpgg~Nspiwsi~~~p~ 187 (1081)
T KOG1538|consen 160 NK-NGEEKVKIERPGGSNSPIWSICWNPS 187 (1081)
T ss_pred cC-CCCcceEEeCCCCCCCCceEEEecCC
Confidence 75 343322233 46679999999984
No 182
>KOG0649|consensus
Probab=99.48 E-value=4.9e-12 Score=80.29 Aligned_cols=130 Identities=15% Similarity=0.296 Sum_probs=94.0
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
.|.++...|..+.+++++.|+.++- +|.++ .+....+++|.. .|.++.--.....+++|+.||.+++
T Consensus 116 eINam~ldP~enSi~~AgGD~~~y~--~dlE~--G~i~r~~rGHtD---------YvH~vv~R~~~~qilsG~EDGtvRv 182 (325)
T KOG0649|consen 116 EINAMWLDPSENSILFAGGDGVIYQ--VDLED--GRIQREYRGHTD---------YVHSVVGRNANGQILSGAEDGTVRV 182 (325)
T ss_pred ccceeEeccCCCcEEEecCCeEEEE--EEecC--CEEEEEEcCCcc---------eeeeeeecccCcceeecCCCccEEE
Confidence 4677888888777888888887776 55555 566667777765 7999988555678999999999999
Q ss_pred EeCCCccceeeeeecc----------cceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 95 WDGFNKKRLCQFHRYD----------TGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 95 wd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
||.++++.+..+...+ .+|-++ .-+..+++.| ....+.+|+++..++..++. ...++..+.|.
T Consensus 183 Wd~kt~k~v~~ie~yk~~~~lRp~~g~wigal-a~~edWlvCG-gGp~lslwhLrsse~t~vfp-ipa~v~~v~F~ 255 (325)
T KOG0649|consen 183 WDTKTQKHVSMIEPYKNPNLLRPDWGKWIGAL-AVNEDWLVCG-GGPKLSLWHLRSSESTCVFP-IPARVHLVDFV 255 (325)
T ss_pred EeccccceeEEeccccChhhcCcccCceeEEE-eccCceEEec-CCCceeEEeccCCCceEEEe-cccceeEeeee
Confidence 9999998887765332 233333 2245566655 45689999999988887775 34456666554
No 183
>KOG1408|consensus
Probab=99.46 E-value=1.3e-12 Score=93.78 Aligned_cols=119 Identities=16% Similarity=0.118 Sum_probs=104.2
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
-+..+..+++.|..++++++..|..|+| |+.+. .+....|++.+. |.+...-+...|.|.++++...|..
T Consensus 595 ~ktTlYDm~Vdp~~k~v~t~cQDrniri--f~i~s--gKq~k~FKgs~~------~eG~lIKv~lDPSgiY~atScsdkt 664 (1080)
T KOG1408|consen 595 SKTTLYDMAVDPTSKLVVTVCQDRNIRI--FDIES--GKQVKSFKGSRD------HEGDLIKVILDPSGIYLATSCSDKT 664 (1080)
T ss_pred ccceEEEeeeCCCcceEEEEecccceEE--Eeccc--cceeeeeccccc------CCCceEEEEECCCccEEEEeecCCc
Confidence 3455678999999999999999999999 66655 455566676554 5567888899999999999999999
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
+.++|+.+++++..+.+|...|+.+ |.+|-+.|++.+.||-|.||.+..
T Consensus 665 l~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 665 LCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred eEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence 9999999999999999999999999 999999999999999999999753
No 184
>KOG1963|consensus
Probab=99.46 E-value=4.1e-12 Score=92.26 Aligned_cols=117 Identities=18% Similarity=0.276 Sum_probs=92.3
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCC-cccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTG-PEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
..++|.+++|+++++++|..||.|.+| .|.. +........+.- |...|.+++|+++|.+|++|+..+.+
T Consensus 206 f~~t~~~~spn~~~~Aa~d~dGrI~vw-~d~~~~~~~~t~t~lHW---------H~~~V~~L~fS~~G~~LlSGG~E~VL 275 (792)
T KOG1963|consen 206 FNITCVALSPNERYLAAGDSDGRILVW-RDFGSSDDSETCTLLHW---------HHDEVNSLSFSSDGAYLLSGGREGVL 275 (792)
T ss_pred ccceeEEeccccceEEEeccCCcEEEE-eccccccccccceEEEe---------cccccceeEEecCCceEeecccceEE
Confidence 346889999999999999999999997 3433 111111112222 44479999999999999999999999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
.+|.+.+++ .+-++.-.+++..+ ++||+.+.+....|+.|.+-...+.
T Consensus 276 v~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl 324 (792)
T KOG1963|consen 276 VLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDL 324 (792)
T ss_pred EEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccch
Confidence 999999987 44455667899999 9999999999999999998876443
No 185
>KOG4328|consensus
Probab=99.45 E-value=2.8e-12 Score=87.37 Aligned_cols=141 Identities=17% Similarity=0.183 Sum_probs=98.2
Q ss_pred ccccEEEEEEeeCC-CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 12 LKFQTRCIKCFPNK-QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~-~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
++..|..++++|.. .+|++++.|++++|||...-..+..+...... |...|.+..|||.+-.|++.+.|.
T Consensus 321 h~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~---------HrrsV~sAyFSPs~gtl~TT~~D~ 391 (498)
T KOG4328|consen 321 HKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLP---------HRRSVNSAYFSPSGGTLLTTCQDN 391 (498)
T ss_pred hhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceeccc---------ccceeeeeEEcCCCCceEeeccCC
Confidence 34478899999965 56889999999999766533322221222222 444899999999987799999999
Q ss_pred eEEEEeCC----Cccceeeeee---cccceeEE---EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCC-ceeEE-E
Q psy1859 91 YVNIWDGF----NKKRLCQFHR---YDTGITSL---FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT-GITSL-C 158 (162)
Q Consensus 91 ~v~~wd~~----~~~~~~~~~~---~~~~v~~~---~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~v-~ 158 (162)
.|+|||.. .-.+...+.. +..+++-+ |.|+-.++++|..-..|-|+|-..++.+..+..... .|.++ .
T Consensus 392 ~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~ 471 (498)
T KOG4328|consen 392 EIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNE 471 (498)
T ss_pred ceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCcccccccccee
Confidence 99999984 2334444432 12334433 999999999999888999999988887776543322 45443 5
Q ss_pred ecC
Q psy1859 159 FSY 161 (162)
Q Consensus 159 ~~p 161 (162)
|+|
T Consensus 472 ~HP 474 (498)
T KOG4328|consen 472 FHP 474 (498)
T ss_pred ecc
Confidence 554
No 186
>KOG1188|consensus
Probab=99.45 E-value=1.4e-12 Score=85.95 Aligned_cols=124 Identities=23% Similarity=0.300 Sum_probs=89.8
Q ss_pred CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC--CCCEEEEecCCCeEEEEeCCCccce
Q psy1859 26 QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ--EYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 26 ~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
..++++...|.|++|+++. .+....+++++. .+..++|.. ....+.+|+.||.|++||+|.....
T Consensus 41 ~~vav~lSngsv~lyd~~t----g~~l~~fk~~~~---------~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~ 107 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGT----GQLLEEFKGPPA---------TTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAES 107 (376)
T ss_pred eeEEEEecCCeEEEEeccc----hhhhheecCCCC---------cccceEEecCCCCCeeEEeccCCeEEEEEeecchhh
Confidence 3478888899999966554 345555666655 577788866 3478999999999999999986554
Q ss_pred eeee--ecc-cceeEE-EcCCCCEEEEec----CCCeEEEEeCCCcee-eeee-ccCCCceeEEEecCC
Q psy1859 104 CQFH--RYD-TGITSL-FHQEYNTFATGG----SDGYVNIWDGFNKKR-LCQF-HRYDTGITSLCFSYD 162 (162)
Q Consensus 104 ~~~~--~~~-~~v~~~-~~~~~~~l~~~~----~d~~i~iwd~~~~~~-~~~~-~~~~~~v~~v~~~pd 162 (162)
.++. .+. .+..++ ..-.++.+++|. .+-.+.+||+|..+. +..+ ..|.+.|++++|+|.
T Consensus 108 a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~ 176 (376)
T KOG1188|consen 108 ARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPS 176 (376)
T ss_pred hheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCC
Confidence 4443 333 234444 444677888875 467899999997765 5544 579999999999984
No 187
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=4.4e-12 Score=89.69 Aligned_cols=135 Identities=10% Similarity=-0.023 Sum_probs=87.9
Q ss_pred ccccccEEEEEEeeCCCeEEEEc-CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe-c
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSS-IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG-G 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~-~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~ 87 (162)
...+++...++|+|||+.|+.++ .+|...||.++...+.. ..+..+. ..+....|+|+|+.|+.. .
T Consensus 244 ~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~---~~lt~~~---------~~~~~~~wSpDG~~i~f~s~ 311 (429)
T PRK01742 244 ASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP---SQLTSGA---------GNNTEPSWSPDGQSILFTSD 311 (429)
T ss_pred ecCCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe---EeeccCC---------CCcCCEEECCCCCEEEEEEC
Confidence 34556667789999999888764 68888898888754221 2222222 247789999999876654 4
Q ss_pred CCCeEEEEeCCCc-cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 88 SDGYVNIWDGFNK-KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~d~~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.++...+|++... .....+ .+.. ... |+|+|++++..+.++ +.+||+.+++.......+ ...++.|+||
T Consensus 312 ~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPd 382 (429)
T PRK01742 312 RSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPN 382 (429)
T ss_pred CCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCC
Confidence 6777888876542 222222 2222 456 999999998887765 555999887654322222 2356778886
No 188
>KOG0644|consensus
Probab=99.44 E-value=5.5e-14 Score=101.90 Aligned_cols=96 Identities=19% Similarity=0.267 Sum_probs=91.2
Q ss_pred cceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceee
Q psy1859 66 EKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRL 144 (162)
Q Consensus 66 ~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 144 (162)
+|..+|.|+.|...|+++++|+.|..++||...++.++....+|.+.++.+ .+.+..++++++.|..|++|.+.++.++
T Consensus 188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv 267 (1113)
T KOG0644|consen 188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV 267 (1113)
T ss_pred hhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchH
Confidence 455589999999999999999999999999999999999999999999999 8888889999999999999999999999
Q ss_pred eeeccCCCceeEEEecC
Q psy1859 145 CQFHRYDTGITSLCFSY 161 (162)
Q Consensus 145 ~~~~~~~~~v~~v~~~p 161 (162)
..+.+|++.|++++|+|
T Consensus 268 svLrghtgavtaiafsP 284 (1113)
T KOG0644|consen 268 SVLRGHTGAVTAIAFSP 284 (1113)
T ss_pred HHHhccccceeeeccCc
Confidence 99999999999999998
No 189
>KOG3881|consensus
Probab=99.44 E-value=2.4e-12 Score=86.15 Aligned_cols=131 Identities=18% Similarity=0.173 Sum_probs=102.8
Q ss_pred EEEEEeeC--CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 17 RCIKCFPN--KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 17 ~~i~~~~~--~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
+.+.|-+. ...|++++.-+.+++|+-..+ .+++..+.-... ++.++...|+++++++|..-+.+..
T Consensus 206 tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~q---RRPV~~fd~~E~---------~is~~~l~p~gn~Iy~gn~~g~l~~ 273 (412)
T KOG3881|consen 206 TDIRFLEGSPNYKFATITRYHQVRLYDTRHQ---RRPVAQFDFLEN---------PISSTGLTPSGNFIYTGNTKGQLAK 273 (412)
T ss_pred ccceecCCCCCceEEEEecceeEEEecCccc---CcceeEeccccC---------cceeeeecCCCcEEEEecccchhhe
Confidence 45778776 788999999999999544422 445555444333 7999999999999999999999999
Q ss_pred EeCCCccceee-eeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 95 WDGFNKKRLCQ-FHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 95 wd~~~~~~~~~-~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
||++.++.... +.+..+.++++ .+|.++++++++-|..++|+|+++.+++.... -.+.+++|-+.
T Consensus 274 FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvY-vKs~lt~il~~ 340 (412)
T KOG3881|consen 274 FDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY-VKSRLTFILLR 340 (412)
T ss_pred ecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhh-hhccccEEEec
Confidence 99999887665 77888999999 99999999999999999999999866554332 23345555543
No 190
>KOG2110|consensus
Probab=99.44 E-value=1.3e-11 Score=82.20 Aligned_cols=112 Identities=18% Similarity=0.240 Sum_probs=86.8
Q ss_pred EEEEEEeeCCCeEEEE--cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe-E
Q psy1859 16 TRCIKCFPNKQGYVLS--SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY-V 92 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~--~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~-v 92 (162)
+.+++.++.+.+++.= ...|.|.| ||..+ .+.+..+..|.. .+.+++|+++|.+||+++..|+ |
T Consensus 132 l~AlS~n~~n~ylAyp~s~t~GdV~l--~d~~n--l~~v~~I~aH~~---------~lAalafs~~G~llATASeKGTVI 198 (391)
T KOG2110|consen 132 LCALSPNNANCYLAYPGSTTSGDVVL--FDTIN--LQPVNTINAHKG---------PLAALAFSPDGTLLATASEKGTVI 198 (391)
T ss_pred eEeeccCCCCceEEecCCCCCceEEE--EEccc--ceeeeEEEecCC---------ceeEEEECCCCCEEEEeccCceEE
Confidence 3344455555677653 34588999 55544 555666666655 7999999999999999998876 5
Q ss_pred EEEeCCCccceeeeeecc--cceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 93 NIWDGFNKKRLCQFHRYD--TGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~--~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
+++.+.+|+.+.+++... ..+.++ |+|++++|++.+..++|+++.+..
T Consensus 199 RVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 199 RVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred EEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 799999999999887543 356677 999999999999999999999864
No 191
>KOG0650|consensus
Probab=99.43 E-value=2.5e-11 Score=85.56 Aligned_cols=141 Identities=14% Similarity=0.117 Sum_probs=96.4
Q ss_pred eeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCC--EE
Q psy1859 6 QRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN--TF 83 (162)
Q Consensus 6 ~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~l 83 (162)
......+++.+.+|+..|.|.+|++|+.||+++||.+.. ..++....... .|.+++|+|.+. .|
T Consensus 393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~T----gRcvr~~~~d~----------~I~~vaw~P~~~~~vL 458 (733)
T KOG0650|consen 393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIAT----GRCVRTVQFDS----------EIRSVAWNPLSDLCVL 458 (733)
T ss_pred eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeec----ceEEEEEeecc----------eeEEEEecCCCCceeE
Confidence 344566788899999999999999999999999965544 44555443333 499999999873 33
Q ss_pred EEecCCCeEEEEeCCCcc-------------------------------------ceeeeeecccceeEE-EcCCCCEEE
Q psy1859 84 ATGGSDGYVNIWDGFNKK-------------------------------------RLCQFHRYDTGITSL-FHQEYNTFA 125 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~~~-------------------------------------~~~~~~~~~~~v~~~-~~~~~~~l~ 125 (162)
+++ ....+.+-+..-|. -++..-.|...|..+ ||..|.||+
T Consensus 459 AvA-~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYla 537 (733)
T KOG0650|consen 459 AVA-VGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLA 537 (733)
T ss_pred EEE-ecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEE
Confidence 333 33334443322110 011112456788899 999999999
Q ss_pred EecCC---CeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 126 TGGSD---GYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 126 ~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+...+ ..|.|+++...+...-|..-.+.|.++.|+|
T Consensus 538 tV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHP 576 (733)
T KOG0650|consen 538 TVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHP 576 (733)
T ss_pred EeccCCCcceEEEEecccccccCchhhcCCceeEEEecC
Confidence 98754 4789999976655555554566788888887
No 192
>KOG1310|consensus
Probab=99.42 E-value=1.4e-12 Score=91.05 Aligned_cols=118 Identities=12% Similarity=0.077 Sum_probs=91.0
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeee-eeeeeccCcccceeceEEEEecCC--CCEEEEec
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAF-KCHRIKEDGIEKIYPVNAISFHQE--YNTFATGG 87 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~ 87 (162)
.+.+-+.|+.|+.+|.+|++|++|-.+.||+.- . .+....+ .+ |.+-|.++.|-|. .+++++|.
T Consensus 48 GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~--~--~KllhsI~Tg---------HtaNIFsvKFvP~tnnriv~sgA 114 (758)
T KOG1310|consen 48 GHTGCVNCLEWNADGELLASGSDDTRLIVWDPF--E--YKLLHSISTG---------HTANIFSVKFVPYTNNRIVLSGA 114 (758)
T ss_pred cccceecceeecCCCCEEeecCCcceEEeecch--h--cceeeeeecc---------cccceeEEeeeccCCCeEEEecc
Confidence 344556778899999999999999999995543 3 3333322 23 5557999999885 37899999
Q ss_pred CCCeEEEEeCCCc----------cceeeeeecccceeEE-EcCCC-CEEEEecCCCeEEEEeCCCc
Q psy1859 88 SDGYVNIWDGFNK----------KRLCQFHRYDTGITSL-FHQEY-NTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 88 ~d~~v~~wd~~~~----------~~~~~~~~~~~~v~~~-~~~~~-~~l~~~~~d~~i~iwd~~~~ 141 (162)
.|..|+++|+... .....+.+|...|..+ -.|++ ..+.++++||+|+-+|++..
T Consensus 115 gDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREp 180 (758)
T KOG1310|consen 115 GDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREP 180 (758)
T ss_pred CcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCC
Confidence 9999999999852 2344556777888888 77877 67889999999999999864
No 193
>KOG0642|consensus
Probab=99.42 E-value=2e-12 Score=90.00 Aligned_cols=119 Identities=17% Similarity=0.260 Sum_probs=94.3
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecC---C-cccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDT---G-PEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
++.+.+.|....|++++.+|.+.+|.+.. . ....+.++++.+|.. +|.|+++.+.+..+.+|+-||.
T Consensus 297 ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~g---------PVl~v~v~~n~~~~ysgg~Dg~ 367 (577)
T KOG0642|consen 297 IRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEG---------PVLCVVVPSNGEHCYSGGIDGT 367 (577)
T ss_pred hhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccC---------ceEEEEecCCceEEEeeccCce
Confidence 45567888888999999999999987721 1 122456677777655 8999999999999999999999
Q ss_pred EEEEeCCCc----------cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee
Q psy1859 92 VNIWDGFNK----------KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR 143 (162)
Q Consensus 92 v~~wd~~~~----------~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~ 143 (162)
|+.|++... .....+.+|...+..+ +|+....|++++.||++++|+......
T Consensus 368 I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 368 IRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred eeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 999965421 1233566889999999 999888999999999999999865544
No 194
>KOG2106|consensus
Probab=99.41 E-value=8.3e-12 Score=86.30 Aligned_cols=138 Identities=13% Similarity=0.187 Sum_probs=101.5
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
..++++++|+|+|.+|+.|+.|+.|.||..+... .+....-+++. .+++.++|+++++++.+-+.|-.|
T Consensus 447 ~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g--~~y~r~~k~~g---------s~ithLDwS~Ds~~~~~~S~d~ei 515 (626)
T KOG2106|consen 447 NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANG--RKYSRVGKCSG---------SPITHLDWSSDSQFLVSNSGDYEI 515 (626)
T ss_pred CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCC--cEEEEeeeecC---------ceeEEeeecCCCceEEeccCceEE
Confidence 5678999999999999999999999998888765 33333323333 279999999999999999999999
Q ss_pred EEEeCCCccceeeee------------------ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc---eeeeeeccC
Q psy1859 93 NIWDGFNKKRLCQFH------------------RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK---KRLCQFHRY 150 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~------------------~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~ 150 (162)
..|.....+.+...+ .+...+..+ -+.+.+++++|...|.|++|...-. ...+.+.+|
T Consensus 516 LyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~gh 595 (626)
T KOG2106|consen 516 LYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGH 595 (626)
T ss_pred EEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeeccc
Confidence 999443222221111 122233334 5567889999999999999986422 235667789
Q ss_pred CCceeEEEecC
Q psy1859 151 DTGITSLCFSY 161 (162)
Q Consensus 151 ~~~v~~v~~~p 161 (162)
.+-|++++|.-
T Consensus 596 s~~vt~V~Fl~ 606 (626)
T KOG2106|consen 596 SSHVTNVAFLC 606 (626)
T ss_pred cceeEEEEEee
Confidence 99999999963
No 195
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.41 E-value=4.9e-12 Score=89.44 Aligned_cols=132 Identities=16% Similarity=0.096 Sum_probs=81.0
Q ss_pred cccEEEEEEeeCCCeEEEEcCCC---cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe-cC
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEG---RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG-GS 88 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~ 88 (162)
...+...+|+|+|+.++.++.++ .+.+ |+..++..+.+..+.++ ...++|+|+|+.|+.+ +.
T Consensus 203 ~~~v~~p~wSPDG~~la~~s~~~~~~~i~i--~dl~tg~~~~l~~~~g~------------~~~~~wSPDG~~La~~~~~ 268 (429)
T PRK01742 203 SQPLMSPAWSPDGSKLAYVSFENKKSQLVV--HDLRSGARKVVASFRGH------------NGAPAFSPDGSRLAFASSK 268 (429)
T ss_pred CCccccceEcCCCCEEEEEEecCCCcEEEE--EeCCCCceEEEecCCCc------------cCceeECCCCCEEEEEEec
Confidence 44567899999999998876542 4666 45443223333222222 3468999999887765 46
Q ss_pred CCeEEE--EeCCCccceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEEeCCCc-eeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNI--WDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDGFNK-KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~--wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~pd 162 (162)
+|.+.| ||+.+++ ...+..+...+... |+|||+.++.++ .++...||++... .....+ .+.. .++.|+||
T Consensus 269 ~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpD 343 (429)
T PRK01742 269 DGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISAD 343 (429)
T ss_pred CCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCC
Confidence 776555 5665544 44455555566777 999999766554 6777788876432 222222 3332 45677776
No 196
>KOG4227|consensus
Probab=99.41 E-value=9.2e-12 Score=83.99 Aligned_cols=142 Identities=13% Similarity=0.012 Sum_probs=104.8
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCc--ccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGP--EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
+.+-|.+|.|+.++++|++|+.|..+.+|..+..- ...+++ .+.++. |..-|.+++|......+.+|..+
T Consensus 55 H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI-~~~~~~-------H~SNIF~L~F~~~N~~~~SG~~~ 126 (609)
T KOG4227|consen 55 HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPI-GVMEHP-------HRSNIFSLEFDLENRFLYSGERW 126 (609)
T ss_pred hccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCc-eeccCc-------cccceEEEEEccCCeeEecCCCc
Confidence 34556778899999999999999999998776421 111222 223332 44579999999988999999999
Q ss_pred CeEEEEeCCCccceeeee--ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce-eeee--eccCCCceeEEEecC
Q psy1859 90 GYVNIWDGFNKKRLCQFH--RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK-RLCQ--FHRYDTGITSLCFSY 161 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~--~~~~~~~v~~v~~~p 161 (162)
++|.+-|+.+.+.+..+. ...+.|+.+ .+|....|++.+.++.|.+||.+... .... +.........+.|+|
T Consensus 127 ~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P 204 (609)
T KOG4227|consen 127 GTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHP 204 (609)
T ss_pred ceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecC
Confidence 999999999887776664 234689999 99988899999999999999998654 2111 122334566677766
No 197
>KOG0650|consensus
Probab=99.41 E-value=1.4e-12 Score=91.67 Aligned_cols=111 Identities=22% Similarity=0.399 Sum_probs=89.9
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+..++.+|.|..+++++.|+.+..+++|..+ +....++.|.. .+++++||+.-.+|++|+.||.+.
T Consensus 608 kwiS~msihp~GDnli~gs~d~k~~WfDldlss---kPyk~lr~H~~---------avr~Va~H~ryPLfas~sdDgtv~ 675 (733)
T KOG0650|consen 608 KWISSMSIHPNGDNLILGSYDKKMCWFDLDLSS---KPYKTLRLHEK---------AVRSVAFHKRYPLFASGSDDGTVI 675 (733)
T ss_pred eeeeeeeecCCCCeEEEecCCCeeEEEEcccCc---chhHHhhhhhh---------hhhhhhhccccceeeeecCCCcEE
Confidence 457789999999999999999999997777654 34445555554 799999999999999999999999
Q ss_pred EEeCC------Cc---cceeeeeecccc----eeEE-EcCCCCEEEEecCCCeEEEE
Q psy1859 94 IWDGF------NK---KRLCQFHRYDTG----ITSL-FHQEYNTFATGGSDGYVNIW 136 (162)
Q Consensus 94 ~wd~~------~~---~~~~~~~~~~~~----v~~~-~~~~~~~l~~~~~d~~i~iw 136 (162)
++--. .. -+++.+.+|... |..+ |||...+|++++.||+|++|
T Consensus 676 Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 676 VFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred EEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 88432 22 245666777554 7777 99999999999999999998
No 198
>KOG0280|consensus
Probab=99.41 E-value=2.6e-11 Score=78.78 Aligned_cols=133 Identities=19% Similarity=0.213 Sum_probs=96.9
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEEEE
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIW 95 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~w 95 (162)
-++.|++.+..++++..+|.+.+ .+......+.+...+.|.. .+.-..|+... +++.+|+.|+.+..|
T Consensus 125 lslD~~~~~~~i~vs~s~G~~~~--v~~t~~~le~vq~wk~He~---------E~Wta~f~~~~pnlvytGgDD~~l~~~ 193 (339)
T KOG0280|consen 125 LSLDISTSGTKIFVSDSRGSISG--VYETEMVLEKVQTWKVHEF---------EAWTAKFSDKEPNLVYTGGDDGSLSCW 193 (339)
T ss_pred eEEEeeccCceEEEEcCCCcEEE--Eecceeeeeecccccccce---------eeeeeecccCCCceEEecCCCceEEEE
Confidence 35668888888999888899885 3322211333334455544 67888887765 788999999999999
Q ss_pred eCCC-ccceee-eeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCC-ceeeeeeccCCCceeEEEecC
Q psy1859 96 DGFN-KKRLCQ-FHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFN-KKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 96 d~~~-~~~~~~-~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~v~~~p 161 (162)
|++. ++.+.. .+.|...|.++ -+| .+.+++||+.|-.|++||.|+ ++++..- .-.+.|+.+.++|
T Consensus 194 D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~-~v~GGVWRi~~~p 263 (339)
T KOG0280|consen 194 DIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA-KVGGGVWRIKHHP 263 (339)
T ss_pred EecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccC-ccccceEEEEecc
Confidence 9994 444443 45688899999 555 788999999999999999994 4444332 3457888888887
No 199
>KOG2919|consensus
Probab=99.40 E-value=6.8e-12 Score=82.49 Aligned_cols=131 Identities=15% Similarity=0.193 Sum_probs=96.0
Q ss_pred eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeC-CCcc
Q psy1859 23 PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDG-FNKK 101 (162)
Q Consensus 23 ~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~-~~~~ 101 (162)
|+..++++.+.+..|++|+. .+++.+..+..-.|.. ...+..+++|+|+|.+|++| ....|+++|+ +.|.
T Consensus 121 P~t~l~a~ssr~~PIh~wda--ftG~lraSy~~ydh~d------e~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr 191 (406)
T KOG2919|consen 121 PSTNLFAVSSRDQPIHLWDA--FTGKLRASYRAYDHQD------EYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGR 191 (406)
T ss_pred CccceeeeccccCceeeeec--cccccccchhhhhhHH------hhhhheeEEecCCCCeEeec-ccceEEEeeccCCCC
Confidence 66788999999999999554 4432443332212211 11256799999999888776 5778999999 5554
Q ss_pred ceeee-------eecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 102 RLCQF-------HRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 102 ~~~~~-------~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..... .+..+.+.++ |+| +.+.++.++....+-||.-....++..+-+|.+.|+.++|++|
T Consensus 192 ~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~ed 261 (406)
T KOG2919|consen 192 DCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCED 261 (406)
T ss_pred CCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccC
Confidence 32211 1235567777 999 6679999999999999998888888888999999999999986
No 200
>KOG2315|consensus
Probab=99.40 E-value=9.2e-12 Score=86.78 Aligned_cols=130 Identities=16% Similarity=0.264 Sum_probs=92.6
Q ss_pred ccccEEEEEEeeCCCeEEEEcCC--CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIE--GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~--g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
-+++|.++.|+|+++.|+++..- ..+.| +|.. ...++.+... +-..+-|+|.|++++.++.+
T Consensus 269 k~GPVhdv~W~~s~~EF~VvyGfMPAkvti--fnlr---~~~v~df~eg-----------pRN~~~fnp~g~ii~lAGFG 332 (566)
T KOG2315|consen 269 KEGPVHDVTWSPSGREFAVVYGFMPAKVTI--FNLR---GKPVFDFPEG-----------PRNTAFFNPHGNIILLAGFG 332 (566)
T ss_pred CCCCceEEEECCCCCEEEEEEecccceEEE--EcCC---CCEeEeCCCC-----------CccceEECCCCCEEEEeecC
Confidence 36899999999999988876554 45566 5543 3455554332 45689999999988877654
Q ss_pred ---CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC------CCeEEEEeCCCceeeeeeccCCCceeEEEe
Q psy1859 90 ---GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS------DGYVNIWDGFNKKRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 90 ---~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 159 (162)
|.+-+||+.+.+++..+.... .+.+ |+|||++++|+.. |+.++||+. +|..+.... ..+....++|
T Consensus 333 NL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~~~~-f~sEL~qv~W 408 (566)
T KOG2315|consen 333 NLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLHEKM-FKSELLQVEW 408 (566)
T ss_pred CCCCceEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceeehhh-hhHhHhheee
Confidence 899999999988887776433 3344 9999999999864 688999998 566555432 2224566666
Q ss_pred cC
Q psy1859 160 SY 161 (162)
Q Consensus 160 ~p 161 (162)
-|
T Consensus 409 ~P 410 (566)
T KOG2315|consen 409 RP 410 (566)
T ss_pred ee
Confidence 54
No 201
>KOG2321|consensus
Probab=99.38 E-value=8.5e-12 Score=87.46 Aligned_cols=145 Identities=17% Similarity=0.185 Sum_probs=101.4
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
+.+.++..++....|++|+.+|.|.+|+-...+ ......+..+-....+......|+++.|+.+|-.+++|+.+|.+.
T Consensus 176 ~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ks--rv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~ 253 (703)
T KOG2321|consen 176 GELNVVSINEEHGLLACGTEDGVVEFWDPRDKS--RVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVL 253 (703)
T ss_pred ccceeeeecCccceEEecccCceEEEecchhhh--hheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEE
Confidence 567888899988999999999999995543322 222222222211111222333599999999999999999999999
Q ss_pred EEeCCCccceeeee-ecccceeEE-EcCC--CCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFH-RYDTGITSL-FHQE--YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~-~~~~~v~~~-~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+||++..+++..-. ...-++..+ |.+. +..+++. ....++|||-.+|+....+.. ...+..+|+-|+
T Consensus 254 iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~ 324 (703)
T KOG2321|consen 254 IYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEP-TSDLNDFCFVPG 324 (703)
T ss_pred EEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeeccc-cCCcCceeeecC
Confidence 99999988765433 345677788 8763 3344444 667899999999998777653 445777777664
No 202
>KOG4547|consensus
Probab=99.38 E-value=3.2e-11 Score=84.46 Aligned_cols=124 Identities=15% Similarity=0.125 Sum_probs=101.3
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCcccee
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~ 104 (162)
...++.|...|.|-+ ++... .+....+... .|.+.|.++.++.+-..|.+++.|+.+..|+....+.++
T Consensus 70 t~~lvlgt~~g~v~~--ys~~~--g~it~~~st~-------~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~ 138 (541)
T KOG4547|consen 70 TSMLVLGTPQGSVLL--YSVAG--GEITAKLSTD-------KHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIR 138 (541)
T ss_pred ceEEEeecCCccEEE--EEecC--CeEEEEEecC-------CCCCcceeeecccccCceEecCCceeEEEEecccceeee
Confidence 345777888888777 44444 2333332221 155589999999888999999999999999999999899
Q ss_pred eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 105 QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 105 ~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.+.+....+.++ .+|||+.+++++. +|++||+.+++.+.++.+|.++|.++.|..
T Consensus 139 ~~~~~~~~~~sl~is~D~~~l~~as~--~ik~~~~~~kevv~~ftgh~s~v~t~~f~~ 194 (541)
T KOG4547|consen 139 IWKEQKPLVSSLCISPDGKILLTASR--QIKVLDIETKEVVITFTGHGSPVRTLSFTT 194 (541)
T ss_pred eeccCCCccceEEEcCCCCEEEeccc--eEEEEEccCceEEEEecCCCcceEEEEEEE
Confidence 998888889999 9999999998864 899999999999999999999999999853
No 203
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.37 E-value=3.8e-11 Score=84.92 Aligned_cols=138 Identities=11% Similarity=-0.020 Sum_probs=87.2
Q ss_pred ccccccEEEEEEeeCCCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG- 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~- 87 (162)
...++.....+|+|||+.++. .+.+|...||.++...... ..+..+. .......|+|+|+.++..+
T Consensus 236 ~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~---~~lt~~~---------~~~~~~~wSpDG~~l~f~s~ 303 (427)
T PRK02889 236 ANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGL---RRLTQSS---------GIDTEPFFSPDGRSIYFTSD 303 (427)
T ss_pred ecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCCc---EECCCCC---------CCCcCeEEcCCCCEEEEEec
Confidence 345566678899999998875 5778888898888654221 1222121 1355678999998777554
Q ss_pred CCCeEEEEeC--CCccceeeeeecccceeEE-EcCCCCEEEEecCCC---eEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 88 SDGYVNIWDG--FNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG---YVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 88 ~d~~v~~wd~--~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.++...+|.+ ..++ ...+.......... |+|+|++++..+.++ .|.+||+.+++... +... .....+.|+|
T Consensus 304 ~~g~~~Iy~~~~~~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~sp 380 (427)
T PRK02889 304 RGGAPQIYRMPASGGA-AQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRDESPSFAP 380 (427)
T ss_pred CCCCcEEEEEECCCCc-eEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCccCceECC
Confidence 3455556654 4443 22222222334456 999999998776554 69999998776443 3322 2346778888
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
|
T Consensus 381 d 381 (427)
T PRK02889 381 N 381 (427)
T ss_pred C
Confidence 6
No 204
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.37 E-value=8.4e-11 Score=83.22 Aligned_cols=136 Identities=12% Similarity=0.020 Sum_probs=83.6
Q ss_pred cccEEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe-cCCC
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG-GSDG 90 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~ 90 (162)
...+...+|+|||+.++..+. .+.-.+|.++...+..+.+..+.+ .+..++|+|+|+.|+.. +.++
T Consensus 198 ~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~------------~~~~~~~SPDG~~La~~~~~~g 265 (429)
T PRK03629 198 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR------------HNGAPAFSPDGSKLAFALSKTG 265 (429)
T ss_pred CCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCC------------CcCCeEECCCCCEEEEEEcCCC
Confidence 345678999999999887643 233334435544422333332222 24568999999877654 4444
Q ss_pred --eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC-C--eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 --YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD-G--YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 --~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++||+.+++... +......+... |+|||+.++..+.+ + .|.++|+.+++. ..+...........|+||
T Consensus 266 ~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpD 341 (429)
T PRK03629 266 SLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSD 341 (429)
T ss_pred CcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCC
Confidence 58899998775433 33334456677 99999988766643 4 455557766543 333334445567888886
No 205
>KOG0644|consensus
Probab=99.36 E-value=5e-13 Score=97.08 Aligned_cols=109 Identities=12% Similarity=0.210 Sum_probs=94.9
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..|.|+.+.-.|.++++|++|..++||..+ + .......++|.. .++.++.+....++++++.|..|+
T Consensus 191 naVyca~fDrtg~~Iitgsdd~lvKiwS~e--t--~~~lAs~rGhs~---------ditdlavs~~n~~iaaaS~D~vIr 257 (1113)
T KOG0644|consen 191 NAVYCAIFDRTGRYIITGSDDRLVKIWSME--T--ARCLASCRGHSG---------DITDLAVSSNNTMIAAASNDKVIR 257 (1113)
T ss_pred hheeeeeeccccceEeecCccceeeeeecc--c--hhhhccCCCCcc---------ccchhccchhhhhhhhcccCceEE
Confidence 346888888899999999999999997643 3 455666677655 699999998888999999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~ 139 (162)
+|.+.++.++..+.+|.+.|+++ |+|-. +.+.||++++||.+
T Consensus 258 vWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 258 VWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred EEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 99999999999999999999999 99954 77799999999987
No 206
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.36 E-value=7.7e-11 Score=83.61 Aligned_cols=138 Identities=12% Similarity=0.006 Sum_probs=87.4
Q ss_pred cccccEEEEEEeeCCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~ 88 (162)
.....+...+|+|||+.|+..+.. +.-.||.++..++..+.+ .... ..+...+|+|+|+.|+ +.+.
T Consensus 199 ~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l---~~~~---------g~~~~~~~SPDG~~la~~~~~ 266 (435)
T PRK05137 199 DGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELV---GNFP---------GMTFAPRFSPDGRKVVMSLSQ 266 (435)
T ss_pred cCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEe---ecCC---------CcccCcEECCCCCEEEEEEec
Confidence 344567889999999998887542 333344455544222222 1121 1467889999997665 5555
Q ss_pred CC--eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-C--CeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DG--YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-D--GYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~--~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++ .|++||+.+++. ..+..+....... |+|||+.++..+. + ..|.++|+.+++. ..+..+...+....|+||
T Consensus 267 ~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~Spd 344 (435)
T PRK05137 267 GGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPR 344 (435)
T ss_pred CCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCC
Confidence 54 477789887654 4444444555667 9999998877653 3 3688889876543 334334555677889886
No 207
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.36 E-value=2.2e-10 Score=78.55 Aligned_cols=116 Identities=10% Similarity=0.028 Sum_probs=77.7
Q ss_pred ccEEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCCCe
Q psy1859 14 FQTRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSDGY 91 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~~ 91 (162)
++...++++|+++++++++. ++.+.+|+++...........+... .....++++|++++++ +...++.
T Consensus 80 ~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~p~g~~l~v~~~~~~~ 149 (330)
T PRK11028 80 GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGL----------EGCHSANIDPDNRTLWVPCLKEDR 149 (330)
T ss_pred CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCC----------CcccEeEeCCCCCEEEEeeCCCCE
Confidence 45567999999998887754 7889997776322111111111111 1367788999997775 5556799
Q ss_pred EEEEeCCCcccee-----eee-ecccceeEE-EcCCCCEEEEecC-CCeEEEEeCC
Q psy1859 92 VNIWDGFNKKRLC-----QFH-RYDTGITSL-FHQEYNTFATGGS-DGYVNIWDGF 139 (162)
Q Consensus 92 v~~wd~~~~~~~~-----~~~-~~~~~v~~~-~~~~~~~l~~~~~-d~~i~iwd~~ 139 (162)
|.+||+.+...+. ... ........+ |+|+|++++++.. ++.|.+|++.
T Consensus 150 v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~ 205 (330)
T PRK11028 150 IRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK 205 (330)
T ss_pred EEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence 9999997632221 111 123445678 9999999988876 8999999997
No 208
>KOG2111|consensus
Probab=99.35 E-value=1.9e-10 Score=75.49 Aligned_cols=138 Identities=19% Similarity=0.211 Sum_probs=95.1
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEE-Ee
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFA-TG 86 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~-~~ 86 (162)
-.+..+|.++.+.++. +++ -..+.|.||.+..+ .+....+...... ..+ ++..|. ..+|+ -|
T Consensus 91 l~f~~~I~~V~l~r~r--iVv-vl~~~I~VytF~~n---~k~l~~~et~~NP-------kGl--C~~~~~~~k~~LafPg 155 (346)
T KOG2111|consen 91 LSFNSEIKAVKLRRDR--IVV-VLENKIYVYTFPDN---PKLLHVIETRSNP-------KGL--CSLCPTSNKSLLAFPG 155 (346)
T ss_pred EEeccceeeEEEcCCe--EEE-EecCeEEEEEcCCC---hhheeeeecccCC-------Cce--EeecCCCCceEEEcCC
Confidence 3455667777777643 443 45678899877532 2333332222210 133 333443 23444 34
Q ss_pred cCCCeEEEEeCCCccc--eeeeeecccceeEE-EcCCCCEEEEecCCCe-EEEEeCCCceeeeeecc--CCCceeEEEec
Q psy1859 87 GSDGYVNIWDGFNKKR--LCQFHRYDTGITSL-FHQEYNTFATGGSDGY-VNIWDGFNKKRLCQFHR--YDTGITSLCFS 160 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~--~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~--~~~~v~~v~~~ 160 (162)
..-|+|++-|+...+. ...+.+|.+.|.++ .+.+|..+||++..|+ |||||..+|+.++.+.. ....|++++||
T Consensus 156 ~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFS 235 (346)
T KOG2111|consen 156 FKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFS 235 (346)
T ss_pred CccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeC
Confidence 5679999999987544 57788999999999 9999999999999986 69999999999988863 23479999999
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
||
T Consensus 236 p~ 237 (346)
T KOG2111|consen 236 PN 237 (346)
T ss_pred CC
Confidence 97
No 209
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.34 E-value=3.8e-10 Score=78.38 Aligned_cols=142 Identities=25% Similarity=0.341 Sum_probs=110.6
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEe-cCCCC-EEEEec
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISF-HQEYN-TFATGG 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~p~~~-~l~~~~ 87 (162)
......+.++.+.+.+..++.++.++.+.+|+.+... .....+..... ..+..+.+ ++++. .++..+
T Consensus 62 ~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 130 (466)
T COG2319 62 RGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE---KLIKSLEGLHD--------SSVSKLALSSPDGNSILLASS 130 (466)
T ss_pred eeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc---eeEEEEeccCC--------CceeeEEEECCCcceEEeccC
Confidence 4456677888899999999999999999997766532 12333333211 13566666 77776 555544
Q ss_pred C-CCeEEEEeCCC-ccceeeeeecccceeEE-EcCCCCEEEEecC-CCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 88 S-DGYVNIWDGFN-KKRLCQFHRYDTGITSL-FHQEYNTFATGGS-DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~-d~~v~~wd~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
. |+.+.+|+... ......+..|...+..+ |+|++++++.++. |+.+++|++..+..+..+..|...|.+++|+|+
T Consensus 131 ~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 209 (466)
T COG2319 131 SLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPD 209 (466)
T ss_pred CCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCC
Confidence 4 99999999998 67777888899999999 9999998888886 999999999988888888889999999999875
No 210
>KOG2111|consensus
Probab=99.33 E-value=1.2e-10 Score=76.46 Aligned_cols=74 Identities=16% Similarity=0.245 Sum_probs=65.6
Q ss_pred ceeceEEEEecCCCCEEEEecCCCe-EEEEeCCCccceeeeeec--ccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 67 KIYPVNAISFHQEYNTFATGGSDGY-VNIWDGFNKKRLCQFHRY--DTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 67 ~~~~v~~~~~~p~~~~l~~~~~d~~-v~~wd~~~~~~~~~~~~~--~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
|...|.+++++-+|.++|+++..|+ |+|||..+|.++.+++.. ...+.++ |||++.+|+++++.|+++|+.++.
T Consensus 180 H~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 180 HDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred ccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 4458999999999999999998876 689999999999988743 4578899 999999999999999999999875
No 211
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.32 E-value=1.6e-10 Score=81.81 Aligned_cols=138 Identities=8% Similarity=-0.047 Sum_probs=85.4
Q ss_pred ccccccEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
...+++....+|+|||+.|+.. +.+|...||.+|..++..+.. .... ..+....|+|+|+.|+..+.
T Consensus 239 ~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~l---t~~~---------~~~~~~~wSPDG~~I~f~s~ 306 (429)
T PRK03629 239 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV---TDGR---------SNNTEPTWFPDSQNLAYTSD 306 (429)
T ss_pred cCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEc---cCCC---------CCcCceEECCCCCEEEEEeC
Confidence 3455666678999999988865 456665566677654222211 1111 14678999999988776654
Q ss_pred C-C--eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC---CeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 89 D-G--YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD---GYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 89 d-~--~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+ + .|+++|+.+++. ..+.......... |+|||++++..+.+ ..|.+||+.+++.. .+... ....+..|+|
T Consensus 307 ~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~Sp 383 (429)
T PRK03629 307 QAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAP 383 (429)
T ss_pred CCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECC
Confidence 3 4 455557665543 3333333444566 99999998876543 35888999877643 33321 2234677888
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
|
T Consensus 384 D 384 (429)
T PRK03629 384 N 384 (429)
T ss_pred C
Confidence 6
No 212
>KOG0321|consensus
Probab=99.31 E-value=9.7e-12 Score=87.96 Aligned_cols=109 Identities=16% Similarity=0.254 Sum_probs=84.3
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccce-eeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQK-MKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
...|+.+..+|.|.+ +|......+ ....+. ....|..+|..+.|-|...+|++++.|.++++||++..+..
T Consensus 64 eHiLavadE~G~i~l--~dt~~~~fr~ee~~lk------~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~ 135 (720)
T KOG0321|consen 64 EHILAVADEDGGIIL--FDTKSIVFRLEERQLK------KPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLV 135 (720)
T ss_pred cceEEEecCCCceee--ecchhhhcchhhhhhc------ccccccceeEeeccCCCceeEEEccCCceeeeeeeccceee
Confidence 456888899999999 554331111 001111 23346679999999996689999999999999999998776
Q ss_pred ee--eeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCc
Q psy1859 104 CQ--FHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 104 ~~--~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
.. +.+|...+.++ |.| +...|++|+.||.|.|||++-.
T Consensus 136 G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n 177 (720)
T KOG0321|consen 136 GGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCN 177 (720)
T ss_pred cceeecccccccchhhhccCCCcceeeccCCCcEEEEEEecc
Confidence 65 77899999999 999 6678999999999999999743
No 213
>KOG1963|consensus
Probab=99.31 E-value=1e-10 Score=85.28 Aligned_cols=135 Identities=16% Similarity=0.272 Sum_probs=97.7
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEe
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWD 96 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd 96 (162)
.+|..++.+.+...... ..+.+|.....+ +.......+. .|...+++.++||.+++++++..||+|.+|.
T Consensus 164 ~~I~~~~~ge~~~i~~~-~~~~~~~v~~~~---~~~~~~~~~~------~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~ 233 (792)
T KOG1963|consen 164 KSIVDNNSGEFKGIVHM-CKIHIYFVPKHT---KHTSSRDITV------HHTFNITCVALSPNERYLAAGDSDGRILVWR 233 (792)
T ss_pred ccEEEcCCceEEEEEEe-eeEEEEEecccc---eeeccchhhh------hhcccceeEEeccccceEEEeccCCcEEEEe
Confidence 56777777776666544 344554333221 1111111111 2555789999999999999999999999996
Q ss_pred CCC--c--cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 97 GFN--K--KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 97 ~~~--~--~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
-.. . .....+.-|...|.++ |+++|.+|.+|+..+.+.+|.+.+++ .+-+..-.++|..+.++||
T Consensus 234 d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~d 303 (792)
T KOG1963|consen 234 DFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPD 303 (792)
T ss_pred ccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCC
Confidence 443 1 2344566678899999 99999999999999999999999988 4445666789999999987
No 214
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.30 E-value=1e-10 Score=82.79 Aligned_cols=137 Identities=16% Similarity=0.067 Sum_probs=80.6
Q ss_pred ccccEEEEEEeeCCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSD 89 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d 89 (162)
....+.+.+|+|+|+.++..+.+ +.-.||.+|..++....+..+.+ .....+|+|+|+.++ +.+.+
T Consensus 194 ~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g------------~~~~~~~SPDG~~la~~~~~~ 261 (427)
T PRK02889 194 SPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKG------------SNSAPAWSPDGRTLAVALSRD 261 (427)
T ss_pred CCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCC------------CccceEECCCCCEEEEEEccC
Confidence 34556778999999998887643 33344546655422222221111 356889999997776 56677
Q ss_pred CeEEEEe--CCCccceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEE--eCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWD--GFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIW--DGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd--~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iw--d~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+...+|. +..+. ...+..+....... |+|||++++..+ .++...+| ++.+++.. .+..........+|+||
T Consensus 262 g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~g~~~~~~~~SpD 338 (427)
T PRK02889 262 GNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFTGSYNTSPRISPD 338 (427)
T ss_pred CCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecCCCCcCceEECCC
Confidence 7656554 44433 44454444455667 999999887655 34555555 44444432 22222333446788886
No 215
>KOG4497|consensus
Probab=99.29 E-value=3.4e-11 Score=79.58 Aligned_cols=129 Identities=16% Similarity=0.254 Sum_probs=95.5
Q ss_pred EEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEEEEe
Q psy1859 18 CIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIWD 96 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~wd 96 (162)
-.+|+|+|+++++++.. .+.| -|..+ .+....+.+-. .|.-+.|..+. ..+.....++.|.+|+
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlvi--Rd~~t--lq~~qlf~cld----------ki~yieW~ads~~ilC~~yk~~~vqvws 77 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVI--RDSET--LQLHQLFLCLD----------KIVYIEWKADSCHILCVAYKDPKVQVWS 77 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEE--eccch--hhHHHHHHHHH----------HhhheeeeccceeeeeeeeccceEEEEE
Confidence 35799999999998776 4444 44444 33333333332 48889999887 4566677899999999
Q ss_pred CCCccceeeeeecccceeEE-EcCCCCE-EEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 97 GFNKKRLCQFHRYDTGITSL-FHQEYNT-FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 97 ~~~~~~~~~~~~~~~~v~~~-~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+...+....+.....++..+ |||||+. |.+...+-.|.+|.+.+.+... ++-.+..+..++|+||
T Consensus 78 l~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~~d 144 (447)
T KOG4497|consen 78 LVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL-LPHPKTNVKGYAFHPD 144 (447)
T ss_pred eecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE-ecccccCceeEEECCC
Confidence 99988888888888888899 9999964 5666688999999998877654 2333445678888886
No 216
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.29 E-value=5.1e-10 Score=76.73 Aligned_cols=140 Identities=8% Similarity=0.029 Sum_probs=86.9
Q ss_pred cEEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-CCCeE
Q psy1859 15 QTRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-SDGYV 92 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~v 92 (162)
....++|+|++++++++.. ++.+.+|+++..++..+....+...+.. ..+......+.++|++++++++. .++.|
T Consensus 176 ~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~i~~~pdg~~lyv~~~~~~~I 252 (330)
T PRK11028 176 GPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPAD---FSDTRWAADIHITPDGRHLYACDRTASLI 252 (330)
T ss_pred CCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCc---CCCCccceeEEECCCCCEEEEecCCCCeE
Confidence 3467899999999888765 8999998887533222223222221110 00111234689999998888775 47899
Q ss_pred EEEeCCCccc----eeeeeecccceeEE-EcCCCCEEEEecC-CCeEEEEeCC--Cce--eeeeeccCCCceeEEEe
Q psy1859 93 NIWDGFNKKR----LCQFHRYDTGITSL-FHQEYNTFATGGS-DGYVNIWDGF--NKK--RLCQFHRYDTGITSLCF 159 (162)
Q Consensus 93 ~~wd~~~~~~----~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~~i~iwd~~--~~~--~~~~~~~~~~~v~~v~~ 159 (162)
.+|++..... +..... ......+ ++|+|++|+++.. ++.|.+|++. ++. .+..+.. .....+++|
T Consensus 253 ~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~~~~-g~~P~~~~~ 327 (330)
T PRK11028 253 SVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGRYAV-GQGPMWVSV 327 (330)
T ss_pred EEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCcEEEcccccc-CCCceEEEE
Confidence 9999865322 222221 2345577 9999999998875 8899999874 333 2333332 334455554
No 217
>KOG1587|consensus
Probab=99.29 E-value=2.8e-11 Score=86.72 Aligned_cols=119 Identities=15% Similarity=0.131 Sum_probs=90.5
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGS 88 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~ 88 (162)
..+.+.+.++.++|-+..+++.+.|-+++||.-+.. ..+++.+..+.. .|++++|||.. ..|+++..
T Consensus 395 ~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~---~~Pl~~~~~~~~---------~v~~vaWSptrpavF~~~d~ 462 (555)
T KOG1587|consen 395 ITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVI---ASPLLSLDSSPD---------YVTDVAWSPTRPAVFATVDG 462 (555)
T ss_pred cccCcceEeeecCCCccceeeeeccceeEeccccCC---CCcchhhhhccc---------eeeeeEEcCcCceEEEEEcC
Confidence 335577889999997766665556999999765532 345555554443 69999999987 68888999
Q ss_pred CCeEEEEeCCCc--cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 89 DGYVNIWDGFNK--KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 89 d~~v~~wd~~~~--~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
||.+.+||+... .++..........+.+ |+++|+.++.|+..|.+.+|++..
T Consensus 463 ~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 463 DGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred CCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 999999999864 4555555454555566 999999999999999999999953
No 218
>KOG1272|consensus
Probab=99.28 E-value=1.4e-11 Score=84.41 Aligned_cols=132 Identities=22% Similarity=0.286 Sum_probs=92.3
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
+.+..++-+|-+..+-+|...|+|.+ |.+.. ..+...+.+|+. +|.++++.++|++++|.+.|..++
T Consensus 252 G~~~vm~qNP~NaVih~GhsnGtVSl--WSP~s--kePLvKiLcH~g---------~V~siAv~~~G~YMaTtG~Dr~~k 318 (545)
T KOG1272|consen 252 GRTDVMKQNPYNAVIHLGHSNGTVSL--WSPNS--KEPLVKILCHRG---------PVSSIAVDRGGRYMATTGLDRKVK 318 (545)
T ss_pred CccchhhcCCccceEEEcCCCceEEe--cCCCC--cchHHHHHhcCC---------CcceEEECCCCcEEeeccccccee
Confidence 55666778888888899999999999 66655 556666677766 899999999999999999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEe-CCCce--eeeeec--cCCCceeEEEecC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWD-GFNKK--RLCQFH--RYDTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd-~~~~~--~~~~~~--~~~~~v~~v~~~p 161 (162)
|||++.-..+.++.. ..+...+ +|..| +++.+....+.||. .-.+. .-..+- ...+.|.++.|+|
T Consensus 319 IWDlR~~~ql~t~~t-p~~a~~ls~Sqkg--lLA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP 389 (545)
T KOG1272|consen 319 IWDLRNFYQLHTYRT-PHPASNLSLSQKG--LLALSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCP 389 (545)
T ss_pred Eeeeccccccceeec-CCCcccccccccc--ceeeecCCeeeeehhhhcCCCCCCcchhhhccCcccccceecc
Confidence 999998765555543 3455566 77555 34444555788994 22211 111111 1233677777776
No 219
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.28 E-value=3.9e-10 Score=80.01 Aligned_cols=137 Identities=10% Similarity=0.008 Sum_probs=84.2
Q ss_pred cccccEEEEEEeeCCCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-C
Q psy1859 11 SLKFQTRCIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-S 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~ 88 (162)
..++...+.+|+|+|+.++. .+.+|.-.||.++..++... .+..+.. .....+|+|+++.|+..+ .
T Consensus 245 ~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~---~lt~~~~---------~~~~~~~spDG~~l~f~sd~ 312 (433)
T PRK04922 245 SFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT---RLTNHFG---------IDTEPTWAPDGKSIYFTSDR 312 (433)
T ss_pred cCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE---ECccCCC---------CccceEECCCCCEEEEEECC
Confidence 34455567899999987764 45666545555666542221 2222211 346789999998877665 3
Q ss_pred CC--eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCC---eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DG--YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG---YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~--~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++ .|+++|+.+++. ..+.......... |+|+|++++..+.++ .|.+||+.+++.. .+. +......+.|+||
T Consensus 313 ~g~~~iy~~dl~~g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spd 389 (433)
T PRK04922 313 GGRPQIYRVAASGGSA-ERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPN 389 (433)
T ss_pred CCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCC
Confidence 44 466777766543 3332233344457 999999988765432 6999999877654 333 2224456788886
No 220
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.28 E-value=2.2e-10 Score=81.25 Aligned_cols=136 Identities=15% Similarity=0.049 Sum_probs=83.5
Q ss_pred cccEEEEEEeeCCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCCC
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSDG 90 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~ 90 (162)
...+...+|+|+++.++.++.+ +.-.||.++...+....+..+.+ .....+|+|+|+.++ +.+.++
T Consensus 203 ~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g------------~~~~~~~SpDG~~l~~~~s~~g 270 (433)
T PRK04922 203 AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRG------------INGAPSFSPDGRRLALTLSRDG 270 (433)
T ss_pred CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCC------------CccCceECCCCCEEEEEEeCCC
Confidence 3456678899999998887644 33233335544322322222111 245789999997665 445544
Q ss_pred --eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEec-CCC--eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 --YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG-SDG--YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 --~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~--~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++||+.+++. ..+..+....... |+|||++++..+ .++ .|.++|+.+++.. .+..+......++|+||
T Consensus 271 ~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g~~~~~~~~SpD 346 (433)
T PRK04922 271 NPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLTFQGNYNARASVSPD 346 (433)
T ss_pred CceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCC
Confidence 699999987754 3444444445567 999999887765 344 4777787666533 23223334556888886
No 221
>KOG3914|consensus
Probab=99.28 E-value=7.9e-11 Score=79.20 Aligned_cols=83 Identities=11% Similarity=0.136 Sum_probs=68.5
Q ss_pred ccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeee-ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 65 IEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 65 ~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
.+|...++.++|+||++.++++..|..|++-.......+..+- +|...|..+ .- ++..|++++.|++|++||+++|+
T Consensus 148 lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~-~~~~LlS~sGD~tlr~Wd~~sgk 226 (390)
T KOG3914|consen 148 LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLT-DNYLLLSGSGDKTLRLWDITSGK 226 (390)
T ss_pred hhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeec-cCceeeecCCCCcEEEEecccCC
Confidence 4688899999999999999999999999998776655555443 688888887 54 34569999999999999999999
Q ss_pred eeeeec
Q psy1859 143 RLCQFH 148 (162)
Q Consensus 143 ~~~~~~ 148 (162)
.+.++.
T Consensus 227 ~L~t~d 232 (390)
T KOG3914|consen 227 LLDTCD 232 (390)
T ss_pred cccccc
Confidence 876653
No 222
>KOG4227|consensus
Probab=99.28 E-value=1.3e-10 Score=78.63 Aligned_cols=129 Identities=12% Similarity=0.028 Sum_probs=99.7
Q ss_pred cccceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCC
Q psy1859 2 GYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN 81 (162)
Q Consensus 2 ~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 81 (162)
|+|.+....++...|.|++|....+++.+|..+++|.+.+++.+. .+..+. +.. ..+.|..+..+|-.+
T Consensus 94 ~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~q----si~V~~-~~~------~~~~VY~m~~~P~DN 162 (609)
T KOG4227|consen 94 PKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQ----SIYVAN-ENN------NRGDVYHMDQHPTDN 162 (609)
T ss_pred CCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccce----eeeeec-ccC------cccceeecccCCCCc
Confidence 567777888888899999999999999999999999996655432 233222 222 223799999999999
Q ss_pred EEEEecCCCeEEEEeCCCcc-ce--eeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCc
Q psy1859 82 TFATGGSDGYVNIWDGFNKK-RL--CQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 82 ~l~~~~~d~~v~~wd~~~~~-~~--~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
.|++.+.++.|.+||.+... .+ ..........+.+ |+| ...++++.+..+-+.+||.+..
T Consensus 163 ~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~ 227 (609)
T KOG4227|consen 163 TLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQ 227 (609)
T ss_pred eEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccc
Confidence 99999999999999998754 22 2233455667778 999 5668888888999999999854
No 223
>KOG1240|consensus
Probab=99.28 E-value=5.6e-10 Score=84.50 Aligned_cols=138 Identities=14% Similarity=0.100 Sum_probs=93.4
Q ss_pred EEEEEeeC-CCeEEEEcCCCcEEEEEecCCccc-ceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 17 RCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEM-QKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 17 ~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
..++.++. +.+|++|+.||+|++|+...-.+. ....-.+..+.. ..++..+.+.+.+..+|.++.||.|.+
T Consensus 1052 ~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~-------~sr~~~vt~~~~~~~~Av~t~DG~v~~ 1124 (1431)
T KOG1240|consen 1052 IKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPE-------GSRVEKVTMCGNGDQFAVSTKDGSVRV 1124 (1431)
T ss_pred cceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEecc-------CCceEEEEeccCCCeEEEEcCCCeEEE
Confidence 34666654 599999999999999776433211 111111222211 126888888898999999999999999
Q ss_pred EeCCCc--c-----c-----------ee-------------------------------------eeeecccceeEE-Ec
Q psy1859 95 WDGFNK--K-----R-----------LC-------------------------------------QFHRYDTGITSL-FH 118 (162)
Q Consensus 95 wd~~~~--~-----~-----------~~-------------------------------------~~~~~~~~v~~~-~~ 118 (162)
.++... + . +. ......+.++++ .+
T Consensus 1125 ~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~id 1204 (1431)
T KOG1240|consen 1125 LRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVID 1204 (1431)
T ss_pred EEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEec
Confidence 877641 0 0 00 001123567888 99
Q ss_pred CCCCEEEEecCCCeEEEEeCCCceeeeeec-cCCCceeEEEecC
Q psy1859 119 QEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSLCFSY 161 (162)
Q Consensus 119 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p 161 (162)
|.+.+++.|+..|.+.+||+|-+.++..+. ++..++..+..+|
T Consensus 1205 p~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~ 1248 (1431)
T KOG1240|consen 1205 PWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCP 1248 (1431)
T ss_pred CCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeec
Confidence 999999999999999999999888777664 3345666665554
No 224
>KOG1310|consensus
Probab=99.27 E-value=1.5e-11 Score=85.97 Aligned_cols=97 Identities=18% Similarity=0.255 Sum_probs=76.7
Q ss_pred ccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeee-ecccceeEE-EcC--CCCEEEEecCCCeEEEEeCCC
Q psy1859 65 IEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSL-FHQ--EYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 65 ~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~-~~~--~~~~l~~~~~d~~i~iwd~~~ 140 (162)
.+|.+-|.+++|+.+|.+|++|+.|-.+.|||....+++..+. +|...|.++ |-| +.+.+++|..|..|+++|+..
T Consensus 47 ~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 47 TGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDS 126 (758)
T ss_pred ccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccc
Confidence 4566799999999999999999999999999999888777665 788899999 998 567899999999999999974
Q ss_pred ce----------eeeeeccCCCceeEEEecC
Q psy1859 141 KK----------RLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 141 ~~----------~~~~~~~~~~~v~~v~~~p 161 (162)
.+ ...-+..|...|..++-.|
T Consensus 127 ~~~~~~d~~~~~~~~~~~cht~rVKria~~p 157 (758)
T KOG1310|consen 127 SKEGGMDHGMEETTRCWSCHTDRVKRIATAP 157 (758)
T ss_pred ccccccccCccchhhhhhhhhhhhhheecCC
Confidence 21 2223345555555555444
No 225
>KOG1538|consensus
Probab=99.26 E-value=4.7e-11 Score=85.52 Aligned_cols=89 Identities=16% Similarity=0.312 Sum_probs=76.7
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
.|..++|-|+|..++.+. +..+.+||...|..++.+++|...|.++ |+.||+.+++|+.|..+.+|..+-. -+..+
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klE-G~LkY- 90 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLE-GILKY- 90 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccccc-ceeee-
Confidence 589999999997666553 5578999999999999999999999999 9999999999999999999997532 23333
Q ss_pred cCCCceeEEEecC
Q psy1859 149 RYDTGITSLCFSY 161 (162)
Q Consensus 149 ~~~~~v~~v~~~p 161 (162)
.|.+.|.|+.|+|
T Consensus 91 SH~D~IQCMsFNP 103 (1081)
T KOG1538|consen 91 SHNDAIQCMSFNP 103 (1081)
T ss_pred ccCCeeeEeecCc
Confidence 5899999999988
No 226
>KOG0771|consensus
Probab=99.26 E-value=2e-11 Score=82.31 Aligned_cols=76 Identities=20% Similarity=0.374 Sum_probs=67.9
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 72 NAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 72 ~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
..++|+++|..+++++.||.+|+|+..+...+.....|...|.++ |+|||++|++-+.| ..+||+++++..++...
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 579999999999999999999999987777777777899999999 99999999999999 99999999986655543
No 227
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.26 E-value=4.9e-10 Score=79.58 Aligned_cols=138 Identities=6% Similarity=-0.056 Sum_probs=88.1
Q ss_pred ccccccEEEEEEeeCCCeEE-EEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYV-LSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~-~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
...++.+...+|+|+|+.++ +.+.++...||.++...+... .+..+. .......|+|+|+.++..+.
T Consensus 242 ~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~---~Lt~~~---------~~~~~~~~spDG~~i~f~s~ 309 (435)
T PRK05137 242 GNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT---RLTDSP---------AIDTSPSYSPDGSQIVFESD 309 (435)
T ss_pred ecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE---EccCCC---------CccCceeEcCCCCEEEEEEC
Confidence 34555667788999998876 456677767776776552222 222222 13567899999988776653
Q ss_pred -C--CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC---CeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 89 -D--GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD---GYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 89 -d--~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+ ..|+++|+..++. +.+.......... |+|+|++++....+ ..|.+||+.++. ...+. ....+..+.|+|
T Consensus 310 ~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt-~~~~~~~p~~sp 386 (435)
T PRK05137 310 RSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILT-SGFLVEGPTWAP 386 (435)
T ss_pred CCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEecc-CCCCCCCCeECC
Confidence 3 3688888776543 3343334455667 99999998876543 368889986544 33333 223466788888
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
|
T Consensus 387 D 387 (435)
T PRK05137 387 N 387 (435)
T ss_pred C
Confidence 6
No 228
>KOG3881|consensus
Probab=99.25 E-value=3.3e-10 Score=76.15 Aligned_cols=143 Identities=17% Similarity=0.118 Sum_probs=106.7
Q ss_pred EEEEEEeeCCCe-EEEEcCC--CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEEecCCC
Q psy1859 16 TRCIKCFPNKQG-YVLSSIE--GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFATGGSDG 90 (162)
Q Consensus 16 ~~~i~~~~~~~~-l~~~~~~--g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~d~ 90 (162)
+..+.-++...+ +++|+.. ..+.||+.+. .+.+++.+..+....+...+-=++++.|-|. ...|++++.-+
T Consensus 151 ~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~----~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~h 226 (412)
T KOG3881|consen 151 LYDVRQTDTDPYIVATGGKENINELKIWDLEQ----SKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYH 226 (412)
T ss_pred eeeeccCCCCCceEecCchhcccceeeeeccc----ceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecce
Confidence 334444554444 5557777 7788865543 3555555544433333333334678899887 78999999999
Q ss_pred eEEEEeCCCc-cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee-eccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNK-KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ-FHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~v~~~pd 162 (162)
++++||.+.+ +++..+.-...+++++ ..|.+.++++|...+.+..+|++.++.... +.+..+.|++|..+|.
T Consensus 227 qvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~ 301 (412)
T KOG3881|consen 227 QVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPT 301 (412)
T ss_pred eEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCC
Confidence 9999999975 5777887778899999 999999999999999999999999987555 7788888888887763
No 229
>KOG1587|consensus
Probab=99.25 E-value=4.2e-10 Score=80.84 Aligned_cols=157 Identities=15% Similarity=0.059 Sum_probs=106.7
Q ss_pred cceeeeccccccEEEEEEeeCC--CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-
Q psy1859 4 IMQRRESSLKFQTRCIKCFPNK--QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY- 80 (162)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~~~--~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~- 80 (162)
+......++...+..+.|..+. ..|++++.||.|..|+.+.-.. ......+...........-...+++++|.+..
T Consensus 282 ~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~-P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p 360 (555)
T KOG1587|consen 282 GLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSL-PVEGLLLESKKHKGQQSSKAVGATSLKFEPTDP 360 (555)
T ss_pred ccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeecccccc-chhhcccccccccccccccccceeeEeeccCCC
Confidence 3455667788888889998754 4489999999999986654321 01111111111000111123368999999976
Q ss_pred CEEEEecCCCeEEEEeCCCcc--------ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCC-CceeeeeeccC
Q psy1859 81 NTFATGGSDGYVNIWDGFNKK--------RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF-NKKRLCQFHRY 150 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~--------~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~ 150 (162)
..|+.|+.+|.|.--+....+ .+..+..|.++++.+ ++|=+..++..+.|-+++||... ...++..+..+
T Consensus 361 ~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~ 440 (555)
T KOG1587|consen 361 NHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSS 440 (555)
T ss_pred ceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhc
Confidence 789999999999874433321 133455788999999 99966666555569999999987 55667677778
Q ss_pred CCceeEEEecC
Q psy1859 151 DTGITSLCFSY 161 (162)
Q Consensus 151 ~~~v~~v~~~p 161 (162)
...|++++|||
T Consensus 441 ~~~v~~vaWSp 451 (555)
T KOG1587|consen 441 PDYVTDVAWSP 451 (555)
T ss_pred cceeeeeEEcC
Confidence 88899999998
No 230
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=9.2e-10 Score=78.10 Aligned_cols=136 Identities=10% Similarity=-0.012 Sum_probs=82.6
Q ss_pred cccEEEEEEeeCCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCCC
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSDG 90 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~ 90 (162)
...+...+|+|+|+.|+..+.+ +.-.||.++..++..+.+....+ .+...+|+|+|+.++ +.+.++
T Consensus 198 ~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g------------~~~~~~~SpDG~~la~~~~~~g 265 (430)
T PRK00178 198 REPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEG------------LNGAPAWSPDGSKLAFVLSKDG 265 (430)
T ss_pred CCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCC------------CcCCeEECCCCCEEEEEEccCC
Confidence 3456778899999998876544 33345556655422333222111 245689999997776 444444
Q ss_pred --eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-C--CeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 --YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-D--GYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 --~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|+++|+.+++. ..+..+....... |+|||+.++..+. + ..|.++|+.+++... +...........|+||
T Consensus 266 ~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~~~~~~~~~~Spd 341 (430)
T PRK00178 266 NPEIYVMDLASRQL-SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VTFVGNYNARPRLSAD 341 (430)
T ss_pred CceEEEEECCCCCe-EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecCCCCccceEECCC
Confidence 688889987654 3344444445566 9999997766553 3 367888887776432 2212223345677775
No 231
>KOG2139|consensus
Probab=99.23 E-value=2.5e-10 Score=76.29 Aligned_cols=133 Identities=14% Similarity=0.244 Sum_probs=91.1
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVN 93 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~ 93 (162)
-.+-++|++--.-+++++.|-.|++ ++.+. +..-.++..... .|++++|-|.+ ..|+.++ .+-|.
T Consensus 100 dlr~~aWhqH~~~fava~nddvVri--y~kss---t~pt~Lks~sQr--------nvtclawRPlsaselavgC-r~gIc 165 (445)
T KOG2139|consen 100 DLRGVAWHQHIIAFAVATNDDVVRI--YDKSS---TCPTKLKSVSQR--------NVTCLAWRPLSASELAVGC-RAGIC 165 (445)
T ss_pred ceeeEeechhhhhhhhhccCcEEEE--eccCC---CCCceecchhhc--------ceeEEEeccCCcceeeeee-cceeE
Confidence 3456889986666888999999999 55443 111222222222 49999999987 5565555 45588
Q ss_pred EEeCCCc----cce----------eeeeecccceeEE-EcCCCCEEEEec-CCCeEEEEeCCCceeeeeeccCCCceeEE
Q psy1859 94 IWDGFNK----KRL----------CQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDGFNKKRLCQFHRYDTGITSL 157 (162)
Q Consensus 94 ~wd~~~~----~~~----------~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~v 157 (162)
+|..... ..+ ...++ ..+|+.+ |.+||..+++++ .|..|+|||..++..+.-...-.+.+.-+
T Consensus 166 iW~~s~tln~~r~~~~~s~~~~qvl~~pg-h~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slL 244 (445)
T KOG2139|consen 166 IWSDSRTLNANRNIRMMSTHHLQVLQDPG-HNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLL 244 (445)
T ss_pred EEEcCcccccccccccccccchhheeCCC-CceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeE
Confidence 9976531 111 11122 3678999 999999999998 56789999999887655443345578889
Q ss_pred EecCC
Q psy1859 158 CFSYD 162 (162)
Q Consensus 158 ~~~pd 162 (162)
.||||
T Consensus 245 kwSPd 249 (445)
T KOG2139|consen 245 KWSPD 249 (445)
T ss_pred EEcCC
Confidence 99997
No 232
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.22 E-value=1.2e-09 Score=77.38 Aligned_cols=145 Identities=10% Similarity=-0.020 Sum_probs=83.9
Q ss_pred eccccccEEEEEEeeCCCeEEEEcC-CC--cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEE
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSI-EG--RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT 85 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~-~g--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 85 (162)
...+++.....+|+|||+.|+..+. +| .+.+..++...+.......+..... ......+|+|+|+.|+.
T Consensus 226 lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~--------~~~~~p~wSPDG~~Laf 297 (428)
T PRK01029 226 ILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAF--------GTQGNPSFSPDGTRLVF 297 (428)
T ss_pred eecCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCC--------CCcCCeEECCCCCEEEE
Confidence 3445566667889999998887653 33 3444324433210011111111110 12456799999987775
Q ss_pred ec-CCCeEEEE--eCCC-ccceeeeeecccceeEE-EcCCCCEEEEecCC---CeEEEEeCCCceeeeeeccCCCceeEE
Q psy1859 86 GG-SDGYVNIW--DGFN-KKRLCQFHRYDTGITSL-FHQEYNTFATGGSD---GYVNIWDGFNKKRLCQFHRYDTGITSL 157 (162)
Q Consensus 86 ~~-~d~~v~~w--d~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~v 157 (162)
.+ .++...+| ++.. +.....+......+... |+|||++++....+ ..|.+||+.+++... +......+.+.
T Consensus 298 ~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p 376 (428)
T PRK01029 298 VSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESP 376 (428)
T ss_pred EECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccce
Confidence 54 45644444 5432 23334444444556677 99999988876543 479999998886543 33333456778
Q ss_pred EecCC
Q psy1859 158 CFSYD 162 (162)
Q Consensus 158 ~~~pd 162 (162)
.|+||
T Consensus 377 ~wSpD 381 (428)
T PRK01029 377 SWAID 381 (428)
T ss_pred EECCC
Confidence 89886
No 233
>KOG1524|consensus
Probab=99.21 E-value=4.7e-10 Score=78.58 Aligned_cols=124 Identities=22% Similarity=0.273 Sum_probs=87.6
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.....++|++|.|+.+.++.+.. +.+.|-.+.++. .+..-+. |.+-|.+++|++...++++|+.|-
T Consensus 143 Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~----k~i~WkA---------HDGiiL~~~W~~~s~lI~sgGED~ 208 (737)
T KOG1524|consen 143 QNEESIRCARWAPNSNSIVFCQG-GHISIKPLAANS----KIIRWRA---------HDGLVLSLSWSTQSNIIASGGEDF 208 (737)
T ss_pred hcCceeEEEEECCCCCceEEecC-CeEEEeeccccc----ceeEEec---------cCcEEEEeecCccccceeecCCce
Confidence 34567899999999887776533 445553333322 2233334 455799999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..++||.. |..+..-..|..+++++ |.|+ +.++.++. +++++ -....+.|..++||||
T Consensus 209 kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~-nt~R~-----------~~p~~GSifnlsWS~D 267 (737)
T KOG1524|consen 209 RFKIWDAQ-GANLFTSAAEEYAITSVAFNPE-KDYLLWSY-NTARF-----------SSPRVGSIFNLSWSAD 267 (737)
T ss_pred eEEeeccc-CcccccCChhccceeeeeeccc-cceeeeee-eeeee-----------cCCCccceEEEEEcCC
Confidence 99999976 66777777899999999 9999 55555543 23441 1234567888888876
No 234
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.20 E-value=1.2e-09 Score=77.73 Aligned_cols=135 Identities=13% Similarity=-0.002 Sum_probs=82.9
Q ss_pred ccEEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEE-ecCCC-
Q psy1859 14 FQTRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT-GGSDG- 90 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~-~~~d~- 90 (162)
..+....|+|||+.++..+. ++...||.++..++..+.+..+.+ .....+|+|+|+.|+. .+.++
T Consensus 218 ~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g------------~~~~~~wSPDG~~La~~~~~~g~ 285 (448)
T PRK04792 218 EPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPG------------INGAPRFSPDGKKLALVLSKDGQ 285 (448)
T ss_pred CcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCC------------CcCCeeECCCCCEEEEEEeCCCC
Confidence 34557889999998887654 455566667765432322222211 2346899999987664 45555
Q ss_pred -eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-C--CeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 -YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-D--GYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 -~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|+++|+.+++. ..+..+....... |+|||++++..+. + ..|.++|+.+++... +..........+|+||
T Consensus 286 ~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~~~~~~~SpD 360 (448)
T PRK04792 286 PEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQNLGGSITPD 360 (448)
T ss_pred eEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCCCCcCeeECCC
Confidence 477888877653 3344444455667 9999998766553 3 357777887766432 2222223345678876
No 235
>KOG2041|consensus
Probab=99.19 E-value=5e-10 Score=81.06 Aligned_cols=152 Identities=11% Similarity=0.082 Sum_probs=107.4
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeee--eeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKY--AFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
-+......|++|+.+..++++|+.||.+++..++..+...+..- ....-..+...-+|.+.|..+.|+...+.|-++.
T Consensus 11 iPnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSD 90 (1189)
T KOG2041|consen 11 IPNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSD 90 (1189)
T ss_pred CCCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccC
Confidence 34455668999999999999999999999977665432221111 1111112223345777999999999999999999
Q ss_pred CCCeEEEEeCCCccceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+|.|.+|-+.+++.+..+-+ ..+.|.++ |+.||..++....||.|.+=.+.. ..+.--.........+.|+||
T Consensus 91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdG-NRIwgKeLkg~~l~hv~ws~D 167 (1189)
T KOG2041|consen 91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDG-NRIWGKELKGQLLAHVLWSED 167 (1189)
T ss_pred CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecc-ceecchhcchheccceeeccc
Confidence 999999999999987765543 35667788 999999999999999998877753 333222222223446677765
No 236
>KOG0974|consensus
Probab=99.18 E-value=8.9e-10 Score=81.87 Aligned_cols=125 Identities=15% Similarity=0.105 Sum_probs=95.5
Q ss_pred EeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 21 CFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNK 100 (162)
Q Consensus 21 ~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~ 100 (162)
.+++.=++++|+.-+.+.+|.+...+ ... .+.+|. +.+.++.|+.+|.++++.+.|..+++|++.+.
T Consensus 141 ~s~~~~~i~~gsv~~~iivW~~~~dn---~p~-~l~GHe---------G~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~ 207 (967)
T KOG0974|consen 141 DSAEELYIASGSVFGEIIVWKPHEDN---KPI-RLKGHE---------GSIFSIVTSLDGRYIASVSDDRSIRLWPIDSR 207 (967)
T ss_pred ccCcEEEEEeccccccEEEEeccccC---Ccc-eecccC---------CceEEEEEccCCcEEEEEecCcceeeeecccc
Confidence 34555578888889999998877322 222 345554 48999999999999999999999999999998
Q ss_pred ccee-eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCC-ceeEEEecC
Q psy1859 101 KRLC-QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT-GITSLCFSY 161 (162)
Q Consensus 101 ~~~~-~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~v~~~p 161 (162)
+... ..-+|...+..+ |.|+ ++++++.|-+.++|+.. ++.+.++..|.. .++.++..+
T Consensus 208 ~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~ 268 (967)
T KOG0974|consen 208 EVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPI 268 (967)
T ss_pred cccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcC
Confidence 7655 555788889999 9988 89999999999999774 444556666653 455555543
No 237
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.18 E-value=4.5e-09 Score=72.93 Aligned_cols=109 Identities=15% Similarity=0.149 Sum_probs=75.7
Q ss_pred CeE-EEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCcccee
Q psy1859 26 QGY-VLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 26 ~~l-~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~ 104 (162)
+++ ++-..++.+.+ +|..+ .+.+..+..... .-..+.++|+++++.+++.||.|.++|+.+.+.+.
T Consensus 6 ~l~~V~~~~~~~v~v--iD~~t--~~~~~~i~~~~~---------~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~ 72 (369)
T PF02239_consen 6 NLFYVVERGSGSVAV--IDGAT--NKVVARIPTGGA---------PHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVA 72 (369)
T ss_dssp GEEEEEEGGGTEEEE--EETTT---SEEEEEE-STT---------EEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEE
T ss_pred cEEEEEecCCCEEEE--EECCC--CeEEEEEcCCCC---------ceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEE
Confidence 344 34567788998 66655 444444443221 23457799999999888999999999999999988
Q ss_pred eeeecccceeEE-EcCCCCEEEEec-CCCeEEEEeCCCceeeeeec
Q psy1859 105 QFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 105 ~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~ 148 (162)
+++.. .....+ +++||+++++++ ..+.+.++|.++.+.+..+.
T Consensus 73 ~i~~G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~ 117 (369)
T PF02239_consen 73 TIKVG-GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIP 117 (369)
T ss_dssp EEE-S-SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE
T ss_pred EEecC-CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecc
Confidence 88753 446678 999999998886 68999999999998887764
No 238
>KOG1517|consensus
Probab=99.17 E-value=1.1e-09 Score=82.02 Aligned_cols=136 Identities=15% Similarity=0.199 Sum_probs=93.3
Q ss_pred EEEEEEe-eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEE
Q psy1859 16 TRCIKCF-PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVN 93 (162)
Q Consensus 16 ~~~i~~~-~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~ 93 (162)
+++++.+ +.|+.+++|-.||.+++||....... ..+...+.|...+ +|..+.+.+.| ..|++|+.+|.|+
T Consensus 1211 vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~d-s~v~~~R~h~~~~-------~Iv~~slq~~G~~elvSgs~~G~I~ 1282 (1387)
T KOG1517|consen 1211 VTALSADLVHGNIIAAGFADGSVRVYDRRMAPPD-SLVCVYREHNDVE-------PIVHLSLQRQGLGELVSGSQDGDIQ 1282 (1387)
T ss_pred ceeecccccCCceEEEeecCCceEEeecccCCcc-ccceeecccCCcc-------cceeEEeecCCCcceeeeccCCeEE
Confidence 3444433 34789999999999999665543311 1233334444321 49999999987 5699999999999
Q ss_pred EEeCCCcccee--eeeec---ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc-------CCCceeEEEec
Q psy1859 94 IWDGFNKKRLC--QFHRY---DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR-------YDTGITSLCFS 160 (162)
Q Consensus 94 ~wd~~~~~~~~--~~~~~---~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~v~~~ 160 (162)
+||++...... .+..+ ++..+++ .|++...+++|+. +.|+||++. |+.+..+.. ..+.+.|++|+
T Consensus 1283 ~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FH 1360 (1387)
T KOG1517|consen 1283 LLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFH 1360 (1387)
T ss_pred EEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhcccccCcccccCcCCCcceeeec
Confidence 99999842222 22222 3458888 9999999999988 999999995 443333322 23467889998
Q ss_pred C
Q psy1859 161 Y 161 (162)
Q Consensus 161 p 161 (162)
|
T Consensus 1361 P 1361 (1387)
T KOG1517|consen 1361 P 1361 (1387)
T ss_pred c
Confidence 7
No 239
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.15 E-value=3.6e-09 Score=74.77 Aligned_cols=136 Identities=10% Similarity=-0.017 Sum_probs=84.1
Q ss_pred ccccEEEEEEeeCCCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC-C
Q psy1859 12 LKFQTRCIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS-D 89 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d 89 (162)
..+...+++|+|+++.|+. .+.++...||.++..++....+ ..+.. ......|+|+++.|+..+. +
T Consensus 232 ~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l---~~~~~---------~~~~~~~s~dg~~l~~~s~~~ 299 (417)
T TIGR02800 232 FPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRL---TNGPG---------IDTEPSWSPDGKSIAFTSDRG 299 (417)
T ss_pred CCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEEC---CCCCC---------CCCCEEECCCCCEEEEEECCC
Confidence 4455667889999987765 4555655555566554222211 11211 2446789999987765543 3
Q ss_pred C--eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCC---eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 G--YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG---YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~--~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+ .|+++|+.+++. ..+.......... |+|+|++++.++.++ .|.+||+.++... .+... .......|+||
T Consensus 300 g~~~iy~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spd 375 (417)
T TIGR02800 300 GSPQIYMMDADGGEV-RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPN 375 (417)
T ss_pred CCceEEEEECCCCCE-EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCC
Confidence 3 688888876543 3343344556667 999999999888765 7899999876432 22222 22344567765
No 240
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.15 E-value=3.5e-09 Score=74.80 Aligned_cols=135 Identities=14% Similarity=0.031 Sum_probs=83.1
Q ss_pred ccEEEEEEeeCCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCC--
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSD-- 89 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d-- 89 (162)
..+...+|+|++++++.++.+ +.-.||.++..++....... .. ..+.+++|+|+++.|+ +.+.+
T Consensus 190 ~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~---~~---------~~~~~~~~spDg~~l~~~~~~~~~ 257 (417)
T TIGR02800 190 EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVAS---FP---------GMNGAPAFSPDGSKLAVSLSKDGN 257 (417)
T ss_pred CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeec---CC---------CCccceEECCCCCEEEEEECCCCC
Confidence 346677899999998887543 22334445554421222211 11 1356789999997665 44444
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-DG--YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..|++||+.+++. ..+..+....... |+|+|+.++..+. ++ .|.++|+.+++.. .+..+...+..+.|+||
T Consensus 258 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spd 332 (417)
T TIGR02800 258 PDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPD 332 (417)
T ss_pred ccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCC
Confidence 4688899887643 3333344444566 9999998876553 33 6888888776543 34434556677888876
No 241
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.14 E-value=5.3e-09 Score=74.10 Aligned_cols=133 Identities=10% Similarity=0.009 Sum_probs=85.0
Q ss_pred EEEEEeeCCCeEEEEc-CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC---CeE
Q psy1859 17 RCIKCFPNKQGYVLSS-IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD---GYV 92 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~-~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d---~~v 92 (162)
...+|+|||+.|+..+ .+|...||.++...... ....+.... ..+....|+|+|+.|+..+.+ ..|
T Consensus 284 ~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~-~~~~lt~~~---------~~~~~p~wSPDG~~Laf~~~~~g~~~I 353 (428)
T PRK01029 284 GNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQ-SPRLLTKKY---------RNSSCPAWSPDGKKIAFCSVIKGVRQI 353 (428)
T ss_pred CCeEECCCCCEEEEEECCCCCceEEEEECccccc-ceEEeccCC---------CCccceeECCCCCEEEEEEcCCCCcEE
Confidence 4678999999888765 46767777665432101 111111111 136688999999888765433 478
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC---CCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS---DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.+||+.+++... +......+... |+|||+.|+.... ...|.++|+.+++..... ...+.+...+|+|
T Consensus 354 ~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt-~~~g~~~~p~Ws~ 424 (428)
T PRK01029 354 CVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV-IGSGEKRFPSWGA 424 (428)
T ss_pred EEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-cCCCcccCceecC
Confidence 999998876533 33223345667 9999998775432 357889999877654433 3445577788887
No 242
>KOG1354|consensus
Probab=99.12 E-value=2.3e-10 Score=76.05 Aligned_cols=140 Identities=14% Similarity=0.130 Sum_probs=96.6
Q ss_pred cceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CE
Q psy1859 4 IMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NT 82 (162)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~ 82 (162)
|.......+.+|+.+|+++.|+..+++ .+|-.|.+|.++...... .+..++.+..++ .+.-|++..|||.. +.
T Consensus 155 prRv~aNaHtyhiNSIS~NsD~Et~lS-ADdLRINLWnlei~d~sF-nIVDIKP~nmEe----LteVITsaEFhp~~cn~ 228 (433)
T KOG1354|consen 155 PRRVYANAHTYHINSISVNSDKETFLS-ADDLRINLWNLEIIDQSF-NIVDIKPANMEE----LTEVITSAEFHPHHCNV 228 (433)
T ss_pred eeeeccccceeEeeeeeecCccceEee-ccceeeeeccccccCCce-eEEEccccCHHH----HHHHHhhhccCHhHccE
Confidence 445556678899999999999998887 567889998877644211 222233333221 33468899999976 88
Q ss_pred EEEecCCCeEEEEeCCCccce------eeee----------ecccceeEE-EcCCCCEEEEecCCCeEEEEeC-CCceee
Q psy1859 83 FATGGSDGYVNIWDGFNKKRL------CQFH----------RYDTGITSL-FHQEYNTFATGGSDGYVNIWDG-FNKKRL 144 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~------~~~~----------~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~-~~~~~~ 144 (162)
|+-.+..|.|++.|++...+. .... .--..|..+ |+++|+|+++-+. -+|++||+ ...+++
T Consensus 229 f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv 307 (433)
T KOG1354|consen 229 FVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPV 307 (433)
T ss_pred EEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcc
Confidence 999999999999999954221 1111 112356677 9999999998743 58999999 455666
Q ss_pred eeeccC
Q psy1859 145 CQFHRY 150 (162)
Q Consensus 145 ~~~~~~ 150 (162)
.+++.|
T Consensus 308 ~t~~vh 313 (433)
T KOG1354|consen 308 ETYPVH 313 (433)
T ss_pred eEEeeh
Confidence 666544
No 243
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.11 E-value=9.5e-09 Score=73.00 Aligned_cols=137 Identities=8% Similarity=-0.063 Sum_probs=82.0
Q ss_pred cccccEEEEEEeeCCCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-C
Q psy1859 11 SLKFQTRCIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-S 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~ 88 (162)
..++.....+|+|+|+.++. .+.+|...||.+|..++.... +..+.. ......|+|+++.++..+ .
T Consensus 240 ~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~---lt~~~~---------~~~~~~~spDg~~i~f~s~~ 307 (430)
T PRK00178 240 NFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSR---VTNHPA---------IDTEPFWGKDGRTLYFTSDR 307 (430)
T ss_pred CCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEE---cccCCC---------CcCCeEECCCCCEEEEEECC
Confidence 34455567899999998874 455666566667765522222 221211 355678999998766554 3
Q ss_pred C--CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC-C--eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 D--GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD-G--YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d--~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+ ..|+++|+.+++.. .+.......... |+|+|++++....+ + .|.++|+.+++.. .+.. ........|+||
T Consensus 308 ~g~~~iy~~d~~~g~~~-~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~~~~~p~~spd 384 (430)
T PRK00178 308 GGKPQIYKVNVNGGRAE-RVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TSLDESPSVAPN 384 (430)
T ss_pred CCCceEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccC-CCCCCCceECCC
Confidence 3 36777788776533 222222233345 99999998877643 3 5888999877543 2321 222235578776
No 244
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.11 E-value=3.7e-10 Score=52.64 Aligned_cols=38 Identities=32% Similarity=0.608 Sum_probs=35.5
Q ss_pred ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEe
Q psy1859 100 KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWD 137 (162)
Q Consensus 100 ~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd 137 (162)
++++..+.+|...|.++ |+|++.+|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 45778899999999999 999999999999999999997
No 245
>KOG4532|consensus
Probab=99.09 E-value=1.9e-08 Score=65.17 Aligned_cols=122 Identities=12% Similarity=-0.030 Sum_probs=90.4
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+..++++++++++++.++...|.+|.+|... ............ +.-.+..|+.....+|++..||.+.||
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~s--ey~~~~~~a~t~--------D~gF~~S~s~~~~~FAv~~Qdg~~~I~ 230 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDES--EYIENIYEAPTS--------DHGFYNSFSENDLQFAVVFQDGTCAIY 230 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCcc--ceeeeeEecccC--------CCceeeeeccCcceEEEEecCCcEEEE
Confidence 5678899999999999999999998777654 222221111111 145688899999999999999999999
Q ss_pred eCCCc-cceee----eeecccceeEE-EcCCCC--EEEEecCCCeEEEEeCCCceeeeee
Q psy1859 96 DGFNK-KRLCQ----FHRYDTGITSL-FHQEYN--TFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 96 d~~~~-~~~~~----~~~~~~~v~~~-~~~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
|++.. .+... -..|.+.+..+ |++-|. +|+..-.-+.+.+.|+|+++..+.+
T Consensus 231 DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I 290 (344)
T KOG4532|consen 231 DVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVI 290 (344)
T ss_pred EecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEE
Confidence 99974 33322 23578889999 998554 6777777789999999998755544
No 246
>KOG0974|consensus
Probab=99.06 E-value=7.5e-09 Score=77.16 Aligned_cols=131 Identities=12% Similarity=0.146 Sum_probs=94.9
Q ss_pred eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccc
Q psy1859 23 PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKR 102 (162)
Q Consensus 23 ~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~ 102 (162)
-+.+++++++.+..+-+|++.... ......+.... ......-+.++++.-++++|+.-+.|.+|+..-.+.
T Consensus 97 ~e~k~i~l~~~~ns~~i~d~~~~~----~~~~i~~~er~-----~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~ 167 (967)
T KOG0974|consen 97 EENKKIALVTSRNSLLIRDSKNSS----VLSKIQSDERC-----TLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNK 167 (967)
T ss_pred hhcceEEEEEcCceEEEEecccCc----eehhcCCCceE-----EEEeEEEEeccCcEEEEEeccccccEEEEeccccCC
Confidence 345667777888888886654322 11111111100 111334455577777899999999999999884333
Q ss_pred eeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeee-eeccCCCceeEEEecCC
Q psy1859 103 LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLC-QFHRYDTGITSLCFSYD 162 (162)
Q Consensus 103 ~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~v~~~pd 162 (162)
...+.+|.+.+..+ ++-||+++++.+.|.++++|++.+.+... +.-+|...|..++|.|+
T Consensus 168 p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n 229 (967)
T KOG0974|consen 168 PIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN 229 (967)
T ss_pred cceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc
Confidence 33678999999999 99999999999999999999999887655 56689999999999874
No 247
>KOG2321|consensus
Probab=99.05 E-value=5.6e-09 Score=73.77 Aligned_cols=131 Identities=27% Similarity=0.346 Sum_probs=91.6
Q ss_pred EEEEEe-eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 17 RCIKCF-PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 17 ~~i~~~-~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
..++++ |....++.|+... ||.++... ......+..... .+.++..++...+|++|+.+|.|..|
T Consensus 137 RDm~y~~~scDly~~gsg~e---vYRlNLEq--GrfL~P~~~~~~---------~lN~v~in~~hgLla~Gt~~g~VEfw 202 (703)
T KOG2321|consen 137 RDMKYHKPSCDLYLVGSGSE---VYRLNLEQ--GRFLNPFETDSG---------ELNVVSINEEHGLLACGTEDGVVEFW 202 (703)
T ss_pred ccccccCCCccEEEeecCcc---eEEEEccc--cccccccccccc---------cceeeeecCccceEEecccCceEEEe
Confidence 345555 3455555554443 34466655 444434433322 69999999999999999999999999
Q ss_pred eCCCccceeeeee------cc-----cceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec-cCCCceeEEEecC
Q psy1859 96 DGFNKKRLCQFHR------YD-----TGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSLCFSY 161 (162)
Q Consensus 96 d~~~~~~~~~~~~------~~-----~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p 161 (162)
|.+....+..+.. +. ..|+++ |+.+|-.+++|..+|.+.|||+++.+++..-. ....+|..+.|.+
T Consensus 203 DpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~ 281 (703)
T KOG2321|consen 203 DPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQD 281 (703)
T ss_pred cchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccc
Confidence 9998766655532 21 248899 99999999999999999999999988765432 2334677777743
No 248
>KOG2695|consensus
Probab=99.05 E-value=1e-09 Score=73.08 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=94.3
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCc-ccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEEecCCCeEEE
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGP-EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATGGSDGYVNI 94 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~v~~ 94 (162)
.++.|...++.+..|..+|.|..+|+.... +....... -. |...|+++..-. +++.|++.+.+|.|.+
T Consensus 256 fAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r-ly---------h~Ssvtslq~Lq~s~q~LmaS~M~gkikL 325 (425)
T KOG2695|consen 256 FALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR-LY---------HDSSVTSLQILQFSQQKLMASDMTGKIKL 325 (425)
T ss_pred HHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE-EE---------cCcchhhhhhhccccceEeeccCcCceeE
Confidence 344566667888899999999996655431 00111111 11 445788887766 5688899999999999
Q ss_pred EeCCCccc---eeeeeecccceeEE---EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC----CceeEEEec
Q psy1859 95 WDGFNKKR---LCQFHRYDTGITSL---FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD----TGITSLCFS 160 (162)
Q Consensus 95 wd~~~~~~---~~~~~~~~~~v~~~---~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~v~~v~~~ 160 (162)
||++.-++ +....+|-....-+ .++....++++++|...+||.++.+..+.++.... ..+.+++|.
T Consensus 326 yD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 326 YDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred eeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence 99997666 77777776554444 67777888999999999999999999888775322 234555553
No 249
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.05 E-value=5.1e-08 Score=67.86 Aligned_cols=134 Identities=15% Similarity=0.017 Sum_probs=94.2
Q ss_pred ccEEEEEEeeCCCeEEEEcCCC-cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEG-RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
+.++-..+..+++-++.|..|| .+-|++.+... .+.. ...- +.|.++..+|+|+.++.+.....+
T Consensus 360 ~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e--~kr~---e~~l---------g~I~av~vs~dGK~~vvaNdr~el 425 (668)
T COG4946 360 GGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE--VKRI---EKDL---------GNIEAVKVSPDGKKVVVANDRFEL 425 (668)
T ss_pred CceEEEEEccCCcceEEeccCCceEEEEecCCce--EEEe---eCCc---------cceEEEEEcCCCcEEEEEcCceEE
Confidence 4455555666667788899998 67785544322 2222 1111 148999999999999999999999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCC----eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG----YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+.|+.+++....-+...+-|+.+ |||++++++.+-.+| .|+++|+.+++...... ..+.-.+-+|.||
T Consensus 426 ~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT-~ta~DfsPaFD~d 499 (668)
T COG4946 426 WVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT-PTAYDFSPAFDPD 499 (668)
T ss_pred EEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC-CcccccCcccCCC
Confidence 999999987654444455678888 999999999997765 69999998887655432 2333344555554
No 250
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.04 E-value=2.9e-08 Score=70.80 Aligned_cols=137 Identities=10% Similarity=-0.021 Sum_probs=80.9
Q ss_pred cccccEEEEEEeeCCCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-C
Q psy1859 11 SLKFQTRCIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-S 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~ 88 (162)
..++.....+|+|+|+.++. .+.+|...||.++..++..+. +..+. ......+|+|+++.++..+ .
T Consensus 259 ~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~---lt~~~---------~~~~~p~wSpDG~~I~f~s~~ 326 (448)
T PRK04792 259 SFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTR---ITRHR---------AIDTEPSWHPDGKSLIFTSER 326 (448)
T ss_pred CCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEE---CccCC---------CCccceEECCCCCEEEEEECC
Confidence 34455557889999998775 466777777777765522221 11121 1356789999998776544 3
Q ss_pred C--CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 D--GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-DG--YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d--~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+ ..|+++|+.+++.. .+.......... |+|||++++..+. ++ .|.++|+.+++.. .+.... ......|+||
T Consensus 327 ~g~~~Iy~~dl~~g~~~-~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~~-~d~~ps~spd 403 (448)
T PRK04792 327 GGKPQIYRVNLASGKVS-RLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTSTR-LDESPSVAPN 403 (448)
T ss_pred CCCceEEEEECCCCCEE-EEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCCC-CCCCceECCC
Confidence 3 35667787766543 232222233446 9999998877654 33 4666788777543 232221 2234467775
No 251
>KOG1334|consensus
Probab=99.03 E-value=8.5e-10 Score=76.26 Aligned_cols=123 Identities=16% Similarity=0.205 Sum_probs=94.9
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcc------c--ceeee-eeeeeeeccCcccceeceEEEEe-cCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPE------M--QKMKY-AFKCHRIKEDGIEKIYPVNAISF-HQEY 80 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~------~--~~~~~-~~~~~~~~~~~~~~~~~v~~~~~-~p~~ 80 (162)
.-..+|++++++.++.-++++..|-.|+++.-+...+ . ...+. .+++|+..+ .|.++-| -|..
T Consensus 334 d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~-------TVKgVNFfGPrs 406 (559)
T KOG1334|consen 334 DDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSR-------TVKGVNFFGPRS 406 (559)
T ss_pred cCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhccccccc-------ccceeeeccCcc
Confidence 3456789999998888788888888888843222221 0 01122 267777654 5777776 6777
Q ss_pred CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
.++++|+..|.|.+|+-.+++.++.+.+....|.|+ =+|--..|++++-|..|+||-..+
T Consensus 407 EyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 407 EYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred ceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence 899999999999999999999999888877788888 888888999999999999998743
No 252
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.03 E-value=1.5e-07 Score=65.10 Aligned_cols=143 Identities=8% Similarity=0.017 Sum_probs=87.1
Q ss_pred ccccEEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE-EEecCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-ATGGSD 89 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d 89 (162)
...|..++.++|+++++++... ...|.+++++...........+..... ...+.++|+|+++++ ++...+
T Consensus 142 ~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G--------~GPRh~~f~pdg~~~Yv~~e~s 213 (345)
T PF10282_consen 142 EGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPG--------SGPRHLAFSPDGKYAYVVNELS 213 (345)
T ss_dssp SSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTT--------SSEEEEEE-TTSSEEEEEETTT
T ss_pred ccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccC--------CCCcEEEEcCCcCEEEEecCCC
Confidence 3466788999999998877643 356777777765422222222222221 257899999999655 555678
Q ss_pred CeEEEEeCC--Ccc--ceeeeeec------ccceeEE-EcCCCCEEEEec-CCCeEEEEeCC--Cce--eeeeeccCCCc
Q psy1859 90 GYVNIWDGF--NKK--RLCQFHRY------DTGITSL-FHQEYNTFATGG-SDGYVNIWDGF--NKK--RLCQFHRYDTG 153 (162)
Q Consensus 90 ~~v~~wd~~--~~~--~~~~~~~~------~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~--~~~--~~~~~~~~~~~ 153 (162)
+.|.++++. +++ .+..+... ......+ ++|||++|+++. .++.|.+|++. +++ .+..+......
T Consensus 214 ~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~ 293 (345)
T PF10282_consen 214 NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKF 293 (345)
T ss_dssp TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSS
T ss_pred CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCC
Confidence 999999988 332 22222211 1246677 999999988876 56789999983 233 34444433445
Q ss_pred eeEEEecCC
Q psy1859 154 ITSLCFSYD 162 (162)
Q Consensus 154 v~~v~~~pd 162 (162)
.+.++++||
T Consensus 294 Pr~~~~s~~ 302 (345)
T PF10282_consen 294 PRHFAFSPD 302 (345)
T ss_dssp EEEEEE-TT
T ss_pred ccEEEEeCC
Confidence 788888875
No 253
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.03 E-value=1.3e-07 Score=65.85 Aligned_cols=130 Identities=14% Similarity=0.121 Sum_probs=80.8
Q ss_pred EEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-CCCeEEEEe
Q psy1859 18 CIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-SDGYVNIWD 96 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~v~~wd 96 (162)
.+.++||++++++++.||.+.+ +|..+ .+.+.+++... ...+++++++|++++++. ..+.+.++|
T Consensus 41 ~~~~s~Dgr~~yv~~rdg~vsv--iD~~~--~~~v~~i~~G~----------~~~~i~~s~DG~~~~v~n~~~~~v~v~D 106 (369)
T PF02239_consen 41 GLKFSPDGRYLYVANRDGTVSV--IDLAT--GKVVATIKVGG----------NPRGIAVSPDGKYVYVANYEPGTVSVID 106 (369)
T ss_dssp EEE-TT-SSEEEEEETTSEEEE--EETTS--SSEEEEEE-SS----------EEEEEEE--TTTEEEEEEEETTEEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEE--EECCc--ccEEEEEecCC----------CcceEEEcCCCCEEEEEecCCCceeEec
Confidence 4678999999999999999999 55554 44444444333 367899999998888765 689999999
Q ss_pred CCCccceeeeeec-------ccceeEE-EcCCCCEE-EEecCCCeEEEEeCCCceee--eeeccCCCceeEEEecCC
Q psy1859 97 GFNKKRLCQFHRY-------DTGITSL-FHQEYNTF-ATGGSDGYVNIWDGFNKKRL--CQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 97 ~~~~~~~~~~~~~-------~~~v~~~-~~~~~~~l-~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~v~~v~~~pd 162 (162)
.++.++++.+... ...+..+ .+|....+ +..-+.+.|.+-|....+.+ ..+. .........|+||
T Consensus 107 ~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~-~g~~~~D~~~dpd 182 (369)
T PF02239_consen 107 AETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIK-VGRFPHDGGFDPD 182 (369)
T ss_dssp TTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE---TTEEEEEE-TT
T ss_pred cccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeec-ccccccccccCcc
Confidence 9999888877643 2345667 77877744 45555688988897665432 2222 2334556666654
No 254
>KOG1517|consensus
Probab=99.02 E-value=1e-08 Score=77.13 Aligned_cols=145 Identities=15% Similarity=0.184 Sum_probs=92.3
Q ss_pred cEEEEEEee--CCCeEEEEcCCCcEEEEEecCCc-ccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 15 QTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGP-EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 15 ~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
.|+.+.+-. |...+++|+.||.|+||+=-... .+.+.+....+-..-..+..- .-.-++|......|++++.-..
T Consensus 1111 ~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~--~~~v~dWqQ~~G~Ll~tGd~r~ 1188 (1387)
T KOG1517|consen 1111 RVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARG--TGLVVDWQQQSGHLLVTGDVRS 1188 (1387)
T ss_pred ccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCC--CCeeeehhhhCCeEEecCCeeE
Confidence 345555443 45678999999999997522211 112332222211110001111 1246788776666666666899
Q ss_pred EEEEeCCCccceeeeee-cccceeEE--EcCCCCEEEEecCCCeEEEEeCCCce---eeeeeccCCCc--eeEEEecC
Q psy1859 92 VNIWDGFNKKRLCQFHR-YDTGITSL--FHQEYNTFATGGSDGYVNIWDGFNKK---RLCQFHRYDTG--ITSLCFSY 161 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~-~~~~v~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~--v~~v~~~p 161 (162)
|+|||......+..+.. ....++.+ -.+.|..+++|..||.|++||.|... .+..+..|... |..+.+.+
T Consensus 1189 IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~ 1266 (1387)
T KOG1517|consen 1189 IRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQR 1266 (1387)
T ss_pred EEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeec
Confidence 99999998877776653 34456666 33468999999999999999998653 46677778776 77777754
No 255
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.98 E-value=2.9e-09 Score=49.58 Aligned_cols=30 Identities=33% Similarity=0.709 Sum_probs=27.6
Q ss_pred ceeceEEEEecCCCCEEEEecCCCeEEEEe
Q psy1859 67 KIYPVNAISFHQEYNTFATGGSDGYVNIWD 96 (162)
Q Consensus 67 ~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd 96 (162)
|...|.+++|+|++.+|++++.|+.|++||
T Consensus 10 h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 10 HSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp SSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 334899999999999999999999999997
No 256
>KOG1334|consensus
Probab=98.94 E-value=4.2e-09 Score=72.93 Aligned_cols=152 Identities=19% Similarity=0.194 Sum_probs=104.3
Q ss_pred eeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc------------------------
Q psy1859 7 RRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE------------------------ 62 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~------------------------ 62 (162)
.....++|-+..+.|+..|..+++|+.|..+.+|+|.... .+..+. .+|..+.
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~--~~l~f~-SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr 212 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGS--PKLSFE-SGHCNNVFQAKFIPFSGDRTIVTSSRDGQVR 212 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccC--cccccc-cccccchhhhhccCCCCCcCceeccccCcee
Confidence 3456677778889999999999999999999999996543 111110 1111111
Q ss_pred --------------CcccceeceEEEEecCCC-CEEEEecCCCeEEEEeCCCccceeeeee---ccc---ceeEE-EcC-
Q psy1859 63 --------------DGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHR---YDT---GITSL-FHQ- 119 (162)
Q Consensus 63 --------------~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~---~~~---~v~~~-~~~- 119 (162)
....|.++|.-++.-|+. ..|.+++.|+.+.-+|++.+.+...+.+ ... ....+ .+|
T Consensus 213 ~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~ 292 (559)
T KOG1334|consen 213 VSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPR 292 (559)
T ss_pred eeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCC
Confidence 123477788899999987 7889999999999999998765444332 222 34566 778
Q ss_pred CCCEEEEecCCCeEEEEeCCCce------eeeeecc------CCCceeEEEecC
Q psy1859 120 EYNTFATGGSDGYVNIWDGFNKK------RLCQFHR------YDTGITSLCFSY 161 (162)
Q Consensus 120 ~~~~l~~~~~d~~i~iwd~~~~~------~~~~~~~------~~~~v~~v~~~p 161 (162)
+...+++++.|..+++||.+.-. .+..+.. ..-.|++++|+.
T Consensus 293 nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh 346 (559)
T KOG1334|consen 293 NTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSH 346 (559)
T ss_pred CccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecC
Confidence 44589999999999999987432 1222222 233688888874
No 257
>KOG1064|consensus
Probab=98.93 E-value=2.2e-09 Score=84.29 Aligned_cols=121 Identities=15% Similarity=0.201 Sum_probs=90.9
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc-------------------------------
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE------------------------------- 62 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 62 (162)
..++.+.|+.+|+.+..+..||.+.+|...+. .....++|....
T Consensus 2252 s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk-----~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~ 2326 (2439)
T KOG1064|consen 2252 SRVTRSRFNHQGNKFGIVDGDGDLSLWQASPK-----PYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPP 2326 (2439)
T ss_pred chhhhhhhcccCCceeeeccCCceeecccCCc-----ceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCc
Confidence 44556778899999999999999999765532 122222222111
Q ss_pred ----CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeC
Q psy1859 63 ----DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 63 ----~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
-...|...++++++.|..++|++|+.+|.|++||++..+....++. ++ ...++++|+..|.++||++
T Consensus 2327 ~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~ 2397 (2439)
T KOG1064|consen 2327 MNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA--------LD-TREYFVTGSSEGNIKIWRL 2397 (2439)
T ss_pred ccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh--------hh-hhheeeccCcccceEEEEc
Confidence 1256888999999999999999999999999999998887776654 23 4568999999999999999
Q ss_pred CCceeeeeec
Q psy1859 139 FNKKRLCQFH 148 (162)
Q Consensus 139 ~~~~~~~~~~ 148 (162)
.....+.++.
T Consensus 2398 s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2398 SEFGLLHTFP 2407 (2439)
T ss_pred cccchhhcCc
Confidence 8776666553
No 258
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.92 E-value=1.3e-06 Score=60.53 Aligned_cols=146 Identities=8% Similarity=-0.035 Sum_probs=89.6
Q ss_pred cccccEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-C
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-S 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~ 88 (162)
+....-+.++|+|+++++++. -.++.|.++.++...+..+.......... +.........|+++|++++|.++. .
T Consensus 189 ~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~i~ispdg~~lyvsnr~ 265 (345)
T PF10282_consen 189 PPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE---GFTGENAPAEIAISPDGRFLYVSNRG 265 (345)
T ss_dssp STTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET---TSCSSSSEEEEEE-TTSSEEEEEECT
T ss_pred ccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc---cccccCCceeEEEecCCCEEEEEecc
Confidence 334455789999999887555 55688999888854432333322222111 011112477899999998766654 6
Q ss_pred CCeEEEEeCCC--cc--ceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEEeC--CCceeeeeec-cCCCceeEEEe
Q psy1859 89 DGYVNIWDGFN--KK--RLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDG--FNKKRLCQFH-RYDTGITSLCF 159 (162)
Q Consensus 89 d~~v~~wd~~~--~~--~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~--~~~~~~~~~~-~~~~~v~~v~~ 159 (162)
.+.|.+|++.. ++ .+..+.........+ ++|+|++|+++. .++.|.+|++ ++|.....-. ..-....||.|
T Consensus 266 ~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 266 SNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp TTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred CCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 78899999943 32 333444445557888 999999999887 5578999866 5666433321 22335677776
No 259
>KOG1064|consensus
Probab=98.92 E-value=4e-09 Score=82.85 Aligned_cols=122 Identities=20% Similarity=0.306 Sum_probs=90.9
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
.+.++.-+|...+.++|+.||.+++|.|.... ....+...+. . .|+.+.|+.+|+.+..+..||.+.+
T Consensus 2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~--~v~~~rt~g~-s---------~vtr~~f~~qGnk~~i~d~dg~l~l 2277 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQ--QVVCFRTAGN-S---------RVTRSRFNHQGNKFGIVDGDGDLSL 2277 (2439)
T ss_pred ceeeecCCCCCceEEecCCCceEEEEeccCCC--eEEEeeccCc-c---------hhhhhhhcccCCceeeeccCCceee
Confidence 34667778888999999999999999887654 3333332232 1 5888888888888888888888888
Q ss_pred EeCCCc-------------------------------------------cceeeeeecccceeEE-EcCCCCEEEEecCC
Q psy1859 95 WDGFNK-------------------------------------------KRLCQFHRYDTGITSL-FHQEYNTFATGGSD 130 (162)
Q Consensus 95 wd~~~~-------------------------------------------~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d 130 (162)
|..... ..-....+|.+.++++ +-|..+++++|+.+
T Consensus 2278 ~q~~pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2278 WQASPKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred cccCCcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCc
Confidence 865411 0001115788889999 99999999999999
Q ss_pred CeEEEEeCCCceeeeeec
Q psy1859 131 GYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 131 ~~i~iwd~~~~~~~~~~~ 148 (162)
|.|++||++..+.+++++
T Consensus 2358 G~v~l~D~rqrql~h~~~ 2375 (2439)
T KOG1064|consen 2358 GEVCLFDIRQRQLRHTFQ 2375 (2439)
T ss_pred CcEEEeehHHHHHHHHhh
Confidence 999999999877665553
No 260
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.92 E-value=2.7e-07 Score=65.69 Aligned_cols=71 Identities=15% Similarity=0.190 Sum_probs=58.8
Q ss_pred eceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 69 YPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 69 ~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
..|.+++++|+...++.|+.||.|.+||...+.. ......-..+.+ |||+|..+++|+.-|.+.+||+.-.
T Consensus 260 s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 260 SQVICCARSPSEDKLVLGCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred CcceEEecCcccceEEEEecCCeEEEEEcCCCee--eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 3799999999999999999999999999876532 222334456677 9999999999999999999998643
No 261
>KOG2315|consensus
Probab=98.91 E-value=1.3e-07 Score=66.64 Aligned_cols=88 Identities=24% Similarity=0.328 Sum_probs=69.4
Q ss_pred ceEEEEecCCCCEEEEe--cCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC---CeEEEEeCCCcee
Q psy1859 70 PVNAISFHQEYNTFATG--GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD---GYVNIWDGFNKKR 143 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~--~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d---~~i~iwd~~~~~~ 143 (162)
+|.++.|+|+++.|+++ -.=-.+.++|++ ++++..+ ..++-.++ |+|.|++++.++.+ |.+-|||+.+.++
T Consensus 272 PVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~ 348 (566)
T KOG2315|consen 272 PVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKL 348 (566)
T ss_pred CceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhh
Confidence 89999999999877654 355788999987 5566655 35667778 99999999998865 7899999999888
Q ss_pred eeeeccCCCceeEEEecCC
Q psy1859 144 LCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 144 ~~~~~~~~~~v~~v~~~pd 162 (162)
+..+..-.. +-+.|+||
T Consensus 349 i~~~~a~~t--t~~eW~Pd 365 (566)
T KOG2315|consen 349 IAKFKAANT--TVFEWSPD 365 (566)
T ss_pred ccccccCCc--eEEEEcCC
Confidence 887765433 34788887
No 262
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.87 E-value=3.9e-07 Score=64.53 Aligned_cols=132 Identities=8% Similarity=-0.049 Sum_probs=78.9
Q ss_pred cEEEEEEeeCCCe-EEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecC--C
Q psy1859 15 QTRCIKCFPNKQG-YVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGS--D 89 (162)
Q Consensus 15 ~~~~i~~~~~~~~-l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~--d 89 (162)
....-.|+|+|+. ++..+.+ +.-.||.+|..++..+.+....+ .....+|+|+|+.++ +.+. +
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g------------~~~~~~~SPDG~~la~~~~~~g~ 256 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQG------------MLVVSDVSKDGSKLLLTMAPKGQ 256 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCC------------cEEeeEECCCCCEEEEEEccCCC
Confidence 4556789999985 6655555 34566667776533444333221 355678999996655 4433 4
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-DG--YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..|.++|+..++. ..+.......... |+|||+.++..+. .+ .|.+.|+.+++..+.... .. ....|+||
T Consensus 257 ~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~--~~~~~SPD 329 (419)
T PRK04043 257 PDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GK--NNSSVSTY 329 (419)
T ss_pred cEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CC--cCceECCC
Confidence 5788888877653 3343333323344 9999987766653 33 688889887765333221 11 22478886
No 263
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.86 E-value=3e-07 Score=60.06 Aligned_cols=85 Identities=12% Similarity=0.239 Sum_probs=58.5
Q ss_pred ceeceEEEEecCCCCEEEEecCC-C----------eEEEEeCCCcccee--------------------ee---------
Q psy1859 67 KIYPVNAISFHQEYNTFATGGSD-G----------YVNIWDGFNKKRLC--------------------QF--------- 106 (162)
Q Consensus 67 ~~~~v~~~~~~p~~~~l~~~~~d-~----------~v~~wd~~~~~~~~--------------------~~--------- 106 (162)
+...|.++.++|..++|+.|+.. . -+..|.+-++.+.. ++
T Consensus 146 yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~ 225 (282)
T PF15492_consen 146 YPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQ 225 (282)
T ss_pred CCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeecc
Confidence 34589999999998888877542 1 24556544322110 00
Q ss_pred eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC
Q psy1859 107 HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD 151 (162)
Q Consensus 107 ~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 151 (162)
......|..+ .||||..|++...+|.|.+|++.+-+....+..++
T Consensus 226 ~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 226 GQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred ccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence 0124567788 99999999999999999999998877766665443
No 264
>KOG4714|consensus
Probab=98.84 E-value=5.4e-09 Score=67.25 Aligned_cols=71 Identities=25% Similarity=0.416 Sum_probs=61.9
Q ss_pred ceEEEEecCCC-CEEEEecCCCeEEEEeCCCcc-ceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCC
Q psy1859 70 PVNAISFHQEY-NTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~-~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~ 140 (162)
.|.+++-+|.. +++++|+.||.+-+||.++.. +...+..|+.++..+ |+| ++..|+++++||.+..||..+
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 58999999977 677888999999999999864 345667899999999 999 888999999999999999864
No 265
>KOG2314|consensus
Probab=98.84 E-value=7.5e-08 Score=68.07 Aligned_cols=131 Identities=16% Similarity=0.111 Sum_probs=91.6
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC-----
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS----- 88 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~----- 88 (162)
...+-+.|||-|.+|++-...| |.+ |...+ ......+ .|+ .|.-+.|||..++|++=+.
T Consensus 211 WTetyv~wSP~GTYL~t~Hk~G-I~l--WGG~~--f~r~~RF-~Hp----------~Vq~idfSP~EkYLVT~s~~p~~~ 274 (698)
T KOG2314|consen 211 WTETYVRWSPKGTYLVTFHKQG-IAL--WGGES--FDRIQRF-YHP----------GVQFIDFSPNEKYLVTYSPEPIIV 274 (698)
T ss_pred ceeeeEEecCCceEEEEEeccc-eee--ecCcc--HHHHHhc-cCC----------CceeeecCCccceEEEecCCcccc
Confidence 3445688999999999866555 566 54433 2222221 143 4899999999999998543
Q ss_pred ------CCeEEEEeCCCccceeeeee--cccceeEE--EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEE
Q psy1859 89 ------DGYVNIWDGFNKKRLCQFHR--YDTGITSL--FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLC 158 (162)
Q Consensus 89 ------d~~v~~wd~~~~~~~~~~~~--~~~~v~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~ 158 (162)
...++|||+++|...+.+.. ....+.-+ ||.|++|+|-... ..|.||+..+..++..-...-++|....
T Consensus 275 ~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~Fs 353 (698)
T KOG2314|consen 275 EEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFS 353 (698)
T ss_pred CcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcc
Confidence 25789999999998888876 33445555 9999999998876 4789999866444333233345678888
Q ss_pred ecC
Q psy1859 159 FSY 161 (162)
Q Consensus 159 ~~p 161 (162)
|+|
T Consensus 354 wsP 356 (698)
T KOG2314|consen 354 WSP 356 (698)
T ss_pred cCC
Confidence 887
No 266
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.83 E-value=5.1e-07 Score=63.92 Aligned_cols=135 Identities=8% Similarity=-0.101 Sum_probs=81.0
Q ss_pred cccccEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-C
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-S 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~ 88 (162)
..++......|+|||+.++.. +.++.-.||.++...+..+.+.. ... ......|+|+|+.|+-.+ .
T Consensus 230 ~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~---~~~---------~d~~p~~SPDG~~I~F~Sdr 297 (419)
T PRK04043 230 SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITN---YPG---------IDVNGNFVEDDKRIVFVSDR 297 (419)
T ss_pred cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEccc---CCC---------ccCccEECCCCCEEEEEECC
Confidence 355556677899999877654 44555566667765432222211 111 123457999997666554 3
Q ss_pred CC--eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC---------CeEEEEeCCCceeeeeeccCCCceeE
Q psy1859 89 DG--YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD---------GYVNIWDGFNKKRLCQFHRYDTGITS 156 (162)
Q Consensus 89 d~--~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~~~~v~~ 156 (162)
.+ .|.+.|+.+++..+.... .. ... |+|||++++..... ..|.+.|+.++.. ..+.... ....
T Consensus 298 ~g~~~Iy~~dl~~g~~~rlt~~-g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~~-~~~~ 372 (419)
T PRK04043 298 LGYPNIFMKKLNSGSVEQVVFH-GK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTANG-VNQF 372 (419)
T ss_pred CCCceEEEEECCCCCeEeCccC-CC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCCC-CcCC
Confidence 33 677888877655332221 11 235 99999988777643 3688889877754 3343322 3345
Q ss_pred EEecCC
Q psy1859 157 LCFSYD 162 (162)
Q Consensus 157 v~~~pd 162 (162)
..|+||
T Consensus 373 p~~SPD 378 (419)
T PRK04043 373 PRFSSD 378 (419)
T ss_pred eEECCC
Confidence 788887
No 267
>KOG4532|consensus
Probab=98.79 E-value=4e-07 Score=59.22 Aligned_cols=91 Identities=14% Similarity=0.048 Sum_probs=68.5
Q ss_pred eEEEEecCCCCEEEEecCCCeEEEEeCCCcc-ceeeee-e-cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee-ee
Q psy1859 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKK-RLCQFH-R-YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR-LC 145 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~-~~~~~~-~-~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~ 145 (162)
+.+++++++++++++.+....|..|.+.... .+..+. . ....-.+. |+.....+|++.+||++.|||+|.... ..
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~ 240 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMA 240 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchh
Confidence 7889999999999999999999999988643 222222 1 22223344 898889999999999999999986542 22
Q ss_pred ----eeccCCCceeEEEecC
Q psy1859 146 ----QFHRYDTGITSLCFSY 161 (162)
Q Consensus 146 ----~~~~~~~~v~~v~~~p 161 (162)
+-..|.+.+..+.|+|
T Consensus 241 ~~sstrp~hnGa~R~c~Fsl 260 (344)
T KOG4532|consen 241 EISSTRPHHNGAFRVCRFSL 260 (344)
T ss_pred hhcccCCCCCCceEEEEecC
Confidence 2235888999999985
No 268
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.79 E-value=1.6e-08 Score=66.95 Aligned_cols=133 Identities=16% Similarity=0.151 Sum_probs=90.2
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGS 88 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~ 88 (162)
..+..|+.+|+++.+...+++ ++|-.|.+|..+...... .+..++.+...+ ...-|++..|+|.. +.+.-.+.
T Consensus 169 NaH~yhiNSiS~NsD~et~lS-aDdLrINLWnl~i~D~sF-nIVDiKP~nmee----LteVItSaeFhp~~cn~fmYSsS 242 (460)
T COG5170 169 NAHPYHINSISFNSDKETLLS-ADDLRINLWNLEIIDGSF-NIVDIKPHNMEE----LTEVITSAEFHPEMCNVFMYSSS 242 (460)
T ss_pred ccceeEeeeeeecCchheeee-ccceeeeeccccccCCce-EEEeccCccHHH----HHHHHhhcccCHhHcceEEEecC
Confidence 557789999999999887777 567888997776544211 222334343221 33468899999976 77888889
Q ss_pred CCeEEEEeCCCccce------eee----------eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc-eeeeeecc
Q psy1859 89 DGYVNIWDGFNKKRL------CQF----------HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK-KRLCQFHR 149 (162)
Q Consensus 89 d~~v~~wd~~~~~~~------~~~----------~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~ 149 (162)
.|.|++-|+++.... ... ..-...|..+ |+++|+++++-+. .++++||++.. .++.++..
T Consensus 243 kG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~ 320 (460)
T COG5170 243 KGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPM 320 (460)
T ss_pred CCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeech
Confidence 999999999954221 111 1123456677 9999999887743 58999999754 45665543
No 269
>KOG3914|consensus
Probab=98.78 E-value=5.8e-08 Score=65.76 Aligned_cols=78 Identities=17% Similarity=0.172 Sum_probs=58.7
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+..++++||+++++++..|..|++-.+... -.+..+ ..+|...|..++.-++ +.|++++.|+++++|
T Consensus 154 l~dVavS~D~~~IitaDRDEkIRvs~ypa~----f~Iesf--------clGH~eFVS~isl~~~-~~LlS~sGD~tlr~W 220 (390)
T KOG3914|consen 154 LLDVAVSPDDQFIITADRDEKIRVSRYPAT----FVIESF--------CLGHKEFVSTISLTDN-YLLLSGSGDKTLRLW 220 (390)
T ss_pred hheeeecCCCCEEEEecCCceEEEEecCcc----cchhhh--------ccccHhheeeeeeccC-ceeeecCCCCcEEEE
Confidence 467899999999999999999998434321 112111 2234558999999875 458999999999999
Q ss_pred eCCCccceeee
Q psy1859 96 DGFNKKRLCQF 106 (162)
Q Consensus 96 d~~~~~~~~~~ 106 (162)
|+.+++.+..+
T Consensus 221 d~~sgk~L~t~ 231 (390)
T KOG3914|consen 221 DITSGKLLDTC 231 (390)
T ss_pred ecccCCccccc
Confidence 99999877554
No 270
>KOG1354|consensus
Probab=98.78 E-value=8.6e-08 Score=64.17 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=86.3
Q ss_pred ccEEEEEEeeCC--CeEEEEcCCCcEEEEEecCCcccc-----------ee-----e-------eeeeeeeeccCcccce
Q psy1859 14 FQTRCIKCFPNK--QGYVLSSIEGRAAVEYLDTGPEMQ-----------KM-----K-------YAFKCHRIKEDGIEKI 68 (162)
Q Consensus 14 ~~~~~i~~~~~~--~~l~~~~~~g~i~i~~~~~~~~~~-----------~~-----~-------~~~~~~~~~~~~~~~~ 68 (162)
..+..|.|.+++ ..+++.+.|.++++|.......+. .. + ..+..........+|+
T Consensus 85 EKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHt 164 (433)
T KOG1354|consen 85 EKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHT 164 (433)
T ss_pred hhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccce
Confidence 345678898864 467888999999998875443111 00 0 0011111122567899
Q ss_pred eceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeee---eec-----ccceeEE-EcCC-CCEEEEecCCCeEEEEeC
Q psy1859 69 YPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQF---HRY-----DTGITSL-FHQE-YNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 69 ~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~---~~~-----~~~v~~~-~~~~-~~~l~~~~~d~~i~iwd~ 138 (162)
..+.++.++.++..++++ .|-.|.+|++.-......+ +.+ ..-|++. |+|. -..++.++..|+|++.|+
T Consensus 165 yhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDm 243 (433)
T KOG1354|consen 165 YHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDM 243 (433)
T ss_pred eEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeec
Confidence 999999999999888877 5888999998754332222 222 2356777 9994 457888889999999999
Q ss_pred CCc
Q psy1859 139 FNK 141 (162)
Q Consensus 139 ~~~ 141 (162)
|..
T Consensus 244 R~~ 246 (433)
T KOG1354|consen 244 RQS 246 (433)
T ss_pred hhh
Confidence 853
No 271
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.78 E-value=2.1e-06 Score=57.85 Aligned_cols=139 Identities=11% Similarity=0.048 Sum_probs=91.8
Q ss_pred cEEEEEEeeCCCeEEEEc---CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC-CC
Q psy1859 15 QTRCIKCFPNKQGYVLSS---IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS-DG 90 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~---~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d~ 90 (162)
..+-|+++|+++.|.++. .+|.|.-+.+|...+....+-....... +-..+++++++++++++.. .|
T Consensus 41 nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~---------~p~yvsvd~~g~~vf~AnY~~g 111 (346)
T COG2706 41 NPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGS---------PPCYVSVDEDGRFVFVANYHSG 111 (346)
T ss_pred CCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCC---------CCeEEEECCCCCEEEEEEccCc
Confidence 345689999999888873 3578888888876422222211111111 3478999999998888874 58
Q ss_pred eEEEEeCCC-ccceee--eeecccc----------eeEE-EcCCCCEEEEecC-CCeEEEEeCCCceeeeee---ccCCC
Q psy1859 91 YVNIWDGFN-KKRLCQ--FHRYDTG----------ITSL-FHQEYNTFATGGS-DGYVNIWDGFNKKRLCQF---HRYDT 152 (162)
Q Consensus 91 ~v~~wd~~~-~~~~~~--~~~~~~~----------v~~~-~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~---~~~~~ 152 (162)
.|.++-++. |.+... ...|.+. +... +.|++++|++.+- --.|.+|++..++....- .....
T Consensus 112 ~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~ 191 (346)
T COG2706 112 SVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGA 191 (346)
T ss_pred eEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCC
Confidence 999999976 432221 1123332 6666 9999999999863 347999999877642211 13455
Q ss_pred ceeEEEecCC
Q psy1859 153 GITSLCFSYD 162 (162)
Q Consensus 153 ~v~~v~~~pd 162 (162)
..+.|.|+|+
T Consensus 192 GPRHi~FHpn 201 (346)
T COG2706 192 GPRHIVFHPN 201 (346)
T ss_pred CcceEEEcCC
Confidence 6788999986
No 272
>KOG1409|consensus
Probab=98.75 E-value=1.2e-07 Score=63.36 Aligned_cols=78 Identities=17% Similarity=0.251 Sum_probs=60.8
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
...+.+.+.+++|.|....+.+|..|..+.+|++-... ...+.+.+|.. .|..+...+--+.+++++.
T Consensus 193 ~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~---g~~~el~gh~~---------kV~~l~~~~~t~~l~S~~e 260 (404)
T KOG1409|consen 193 FNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRK---GTAYELQGHND---------KVQALSYAQHTRQLISCGE 260 (404)
T ss_pred EcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCc---ceeeeeccchh---------hhhhhhhhhhheeeeeccC
Confidence 34455667888999999999999999999997776543 23344445544 5888877777789999999
Q ss_pred CCeEEEEeCC
Q psy1859 89 DGYVNIWDGF 98 (162)
Q Consensus 89 d~~v~~wd~~ 98 (162)
||.|.+||.+
T Consensus 261 dg~i~~w~mn 270 (404)
T KOG1409|consen 261 DGGIVVWNMN 270 (404)
T ss_pred CCeEEEEecc
Confidence 9999999987
No 273
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.73 E-value=1.3e-07 Score=67.18 Aligned_cols=78 Identities=18% Similarity=0.219 Sum_probs=60.9
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
..-+++.++.|.+++|+.+.++.|..||.|.+|+..... .. +..... .++.++|||+|..+++|+
T Consensus 254 tsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~--t~----~~ka~~---------~P~~iaWHp~gai~~V~s 318 (545)
T PF11768_consen 254 TSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGV--TL----LAKAEF---------IPTLIAWHPDGAIFVVGS 318 (545)
T ss_pred EEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCe--ee----eeeecc---------cceEEEEcCCCcEEEEEc
Confidence 345678889999999999999999999999995443221 11 111222 578999999999999999
Q ss_pred CCCeEEEEeCCCc
Q psy1859 88 SDGYVNIWDGFNK 100 (162)
Q Consensus 88 ~d~~v~~wd~~~~ 100 (162)
..|.+.+||+.-.
T Consensus 319 ~qGelQ~FD~ALs 331 (545)
T PF11768_consen 319 EQGELQCFDMALS 331 (545)
T ss_pred CCceEEEEEeecC
Confidence 9999999998743
No 274
>KOG4497|consensus
Probab=98.72 E-value=6.1e-07 Score=59.98 Aligned_cols=89 Identities=12% Similarity=0.130 Sum_probs=65.1
Q ss_pred ceEEEEecCCCCEEEEecCC--CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee
Q psy1859 70 PVNAISFHQEYNTFATGGSD--GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d--~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 146 (162)
.+.-++|++|..++++-... +.+.+||++.-+....+ ....+|... |+|....|+.+.....+++|.......+..
T Consensus 320 g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL-iQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~v 398 (447)
T KOG4497|consen 320 GAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL-IQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGV 398 (447)
T ss_pred ccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh-hhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEec
Confidence 56689999999888887654 78999999876554444 467788889 999888888888888899999865444433
Q ss_pred eccCCCceeEEEec
Q psy1859 147 FHRYDTGITSLCFS 160 (162)
Q Consensus 147 ~~~~~~~v~~v~~~ 160 (162)
- ...-.|..++|.
T Consensus 399 P-~~GF~i~~l~W~ 411 (447)
T KOG4497|consen 399 P-KKGFNIQKLQWL 411 (447)
T ss_pred C-CCCceeeeEEec
Confidence 2 222356666664
No 275
>KOG4640|consensus
Probab=98.71 E-value=1.2e-07 Score=67.93 Aligned_cols=91 Identities=22% Similarity=0.255 Sum_probs=76.5
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeeccccee-EE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGIT-SL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~-~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
.+.-+.|+|.-.++|.+..+|.+.+..+. .+.+.+++.++..++ ++ |.|||+.++.|-.||+|++.|+.++..+...
T Consensus 22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~ 100 (665)
T KOG4640|consen 22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSF 100 (665)
T ss_pred ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecc
Confidence 47889999999999999999999999988 788888886777777 78 9999999999999999999999998876652
Q ss_pred -ccCCCceeEEEecC
Q psy1859 148 -HRYDTGITSLCFSY 161 (162)
Q Consensus 148 -~~~~~~v~~v~~~p 161 (162)
......|.++-|+|
T Consensus 101 ~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 101 LFSVETDISKGIWDR 115 (665)
T ss_pred ccccccchheeeccc
Confidence 23445677777753
No 276
>KOG4547|consensus
Probab=98.67 E-value=1.7e-06 Score=61.49 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=95.8
Q ss_pred eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEe------cC--------------CCCE
Q psy1859 23 PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISF------HQ--------------EYNT 82 (162)
Q Consensus 23 ~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~p--------------~~~~ 82 (162)
|...+++..+.||.+++|+....+ ....+.-..+.. +..++..| +| +...
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~--~~~e~~p~~~~s--------~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~ 72 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQ--LQQEFAPIASLS--------GTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSM 72 (541)
T ss_pred chhheEeecCCCCeEEEEEccCce--eeeeeccchhcc--------CcceeEEEEEEeccchHHHHhHHHHhhccCCceE
Confidence 446789999999999996544332 322222111110 12222222 22 2236
Q ss_pred EEEecCCCeEEEEeCCCccceeeee--ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEe
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLCQFH--RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 159 (162)
++-|...|.|.+|++..++....+. +|.+.+.++ ++.+-.-+.+++.|..+..|+...++.++.+..-...+.+++.
T Consensus 73 lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~i 152 (541)
T KOG4547|consen 73 LVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCI 152 (541)
T ss_pred EEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEE
Confidence 7778899999999999998777765 678889999 9998899999999999999999999999988888888999999
Q ss_pred cCC
Q psy1859 160 SYD 162 (162)
Q Consensus 160 ~pd 162 (162)
+||
T Consensus 153 s~D 155 (541)
T KOG4547|consen 153 SPD 155 (541)
T ss_pred cCC
Confidence 987
No 277
>KOG1912|consensus
Probab=98.63 E-value=5.9e-07 Score=66.14 Aligned_cols=130 Identities=8% Similarity=0.130 Sum_probs=92.5
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC------------CEEE
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY------------NTFA 84 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~------------~~l~ 84 (162)
.++.|+|.| .++.|+. ..|.+ .|..+ .+.+..+..|.. .|+.+.|.|.. -+|+
T Consensus 19 ~A~Dw~~~G-LiAygsh-slV~V--VDs~s--~q~iqsie~h~s---------~V~~VrWap~~~p~~llS~~~~~lliA 83 (1062)
T KOG1912|consen 19 NAADWSPSG-LIAYGSH-SLVSV--VDSRS--LQLIQSIELHQS---------AVTSVRWAPAPSPRDLLSPSSSQLLIA 83 (1062)
T ss_pred cccccCccc-eEEEecC-ceEEE--Eehhh--hhhhhccccCcc---------ceeEEEeccCCCchhccCccccceeEE
Confidence 457788876 3455443 45566 66554 455555555543 79999998842 2567
Q ss_pred EecCCCeEEEEeCCCccceeeeeecccceeEE-EcC---CC-CEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEe
Q psy1859 85 TGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ---EY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~---~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 159 (162)
++...|.|.+||...+..+..+..+..++..+ |-+ +. .+|++-.....+.+|+..+|+....+..-.....|+.+
T Consensus 84 saD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~ 163 (1062)
T KOG1912|consen 84 SADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRV 163 (1062)
T ss_pred eccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeee
Confidence 77788999999999998888888888888888 554 55 46667777889999999999988877644444555666
Q ss_pred cC
Q psy1859 160 SY 161 (162)
Q Consensus 160 ~p 161 (162)
.|
T Consensus 164 DP 165 (1062)
T KOG1912|consen 164 DP 165 (1062)
T ss_pred CC
Confidence 54
No 278
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.63 E-value=6.3e-06 Score=57.86 Aligned_cols=97 Identities=12% Similarity=-0.004 Sum_probs=76.5
Q ss_pred ccceeceEEEEecCCCCEEEEecCCC-eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 65 IEKIYPVNAISFHQEYNTFATGGSDG-YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 65 ~~~~~~v~~~~~~p~~~~l~~~~~d~-~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
.++...|.-..+.-+++-++.|..|| .+-++|.+.++ ++.+...-+.|.++ .+|+|++++++.....|.+.|+.+++
T Consensus 356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e-~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn 434 (668)
T COG4946 356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE-VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN 434 (668)
T ss_pred cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce-EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence 34555677777777777888999998 88999988764 44555556778888 99999999999999999999999987
Q ss_pred eeeeeccCCCceeEEEecCC
Q psy1859 143 RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 143 ~~~~~~~~~~~v~~v~~~pd 162 (162)
....=+...+-|+.+.|+|+
T Consensus 435 v~~idkS~~~lItdf~~~~n 454 (668)
T COG4946 435 VRLIDKSEYGLITDFDWHPN 454 (668)
T ss_pred eeEecccccceeEEEEEcCC
Confidence 54433445667899999986
No 279
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.58 E-value=4.5e-05 Score=50.36 Aligned_cols=133 Identities=17% Similarity=0.095 Sum_probs=85.6
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCc------EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE-EEe
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGR------AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-ATG 86 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~ 86 (162)
.....+++.|+|+..++...... =.||.++... ...... ..-. ....|+|+|+++.| ++-
T Consensus 86 ~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~-~~~~~~--~~~~----------~pNGi~~s~dg~~lyv~d 152 (246)
T PF08450_consen 86 NRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDG-KVTVVA--DGLG----------FPNGIAFSPDGKTLYVAD 152 (246)
T ss_dssp EEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTS-EEEEEE--EEES----------SEEEEEEETTSSEEEEEE
T ss_pred CCCceEEEcCCCCEEEEecCCCccccccccceEEECCCC-eEEEEe--cCcc----------cccceEECCcchheeecc
Confidence 34467899999997776544321 3455576652 122221 1111 47899999999755 567
Q ss_pred cCCCeEEEEeCCCccc-e---eee---eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEE
Q psy1859 87 GSDGYVNIWDGFNKKR-L---CQF---HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLC 158 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~-~---~~~---~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~ 158 (162)
+..+.|..+++..... + ..+ ....+..-.+ +..+|++.++....+.|.++|.+ |+.+..+......+++++
T Consensus 153 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~ 231 (246)
T PF08450_consen 153 SFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCA 231 (246)
T ss_dssp TTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEE
T ss_pred cccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEE
Confidence 7889999999864221 1 122 1112235567 99999988888888999999987 888877776656899999
Q ss_pred ec
Q psy1859 159 FS 160 (162)
Q Consensus 159 ~~ 160 (162)
|.
T Consensus 232 fg 233 (246)
T PF08450_consen 232 FG 233 (246)
T ss_dssp EE
T ss_pred EE
Confidence 94
No 280
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.58 E-value=5.1e-06 Score=64.19 Aligned_cols=155 Identities=15% Similarity=0.083 Sum_probs=95.4
Q ss_pred eeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEe--cCCcc-----------------cceeeeeeeeeeecc----
Q psy1859 6 QRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYL--DTGPE-----------------MQKMKYAFKCHRIKE---- 62 (162)
Q Consensus 6 ~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~--~~~~~-----------------~~~~~~~~~~~~~~~---- 62 (162)
.+..-.....|.+++||||+..++.++.++++.+..- ++-.. .++....|.|.....
T Consensus 113 ~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~ 192 (928)
T PF04762_consen 113 IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQ 192 (928)
T ss_pred eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhh
Confidence 3444567788999999999999999999998887332 11100 001111111111110
Q ss_pred -----------CcccceeceEEEEecCCCCEEEEecC------CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEE
Q psy1859 63 -----------DGIEKIYPVNAISFHQEYNTFATGGS------DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTF 124 (162)
Q Consensus 63 -----------~~~~~~~~v~~~~~~p~~~~l~~~~~------d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l 124 (162)
........-..++|-.||.+|++.+. -..+++|+-+ |.....-....+--..+ |.|.|.++
T Consensus 193 ~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lI 271 (928)
T PF04762_consen 193 LRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLI 271 (928)
T ss_pred ccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEE
Confidence 00002335678999999999998764 2578999965 65544443333444456 99999999
Q ss_pred EEecC---CCeEEEEeCCCceeeeeec----cCCCceeEEEecCC
Q psy1859 125 ATGGS---DGYVNIWDGFNKKRLCQFH----RYDTGITSLCFSYD 162 (162)
Q Consensus 125 ~~~~~---d~~i~iwd~~~~~~~~~~~----~~~~~v~~v~~~pd 162 (162)
++... ...|.+|.- +|-....+. .....|..+.|++|
T Consensus 272 A~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn~d 315 (928)
T PF04762_consen 272 ASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELAWNSD 315 (928)
T ss_pred EEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeEEEECCC
Confidence 98864 345667763 554433332 33457899999986
No 281
>KOG1240|consensus
Probab=98.57 E-value=5.5e-06 Score=63.90 Aligned_cols=136 Identities=14% Similarity=0.145 Sum_probs=90.4
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCccccee--------------eeeeee---eeec---------c---
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKM--------------KYAFKC---HRIK---------E--- 62 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~--------------~~~~~~---~~~~---------~--- 62 (162)
....+.++...+.+..+++++.||.|.+..+|........ +..+.. +... .
T Consensus 1097 ~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv 1176 (1431)
T KOG1240|consen 1097 EGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIV 1176 (1431)
T ss_pred cCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceE
Confidence 3455678888899999999999999999777652100000 000000 0000 0
Q ss_pred -------------CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeee-ecccceeEE-EcC---CCCEE
Q psy1859 63 -------------DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSL-FHQ---EYNTF 124 (162)
Q Consensus 63 -------------~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~-~~~---~~~~l 124 (162)
....-.+.|++++.+|.++.++.|+..|.+.+||++=+.++..+. .+..++..+ .+| .....
T Consensus 1177 ~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~ 1256 (1431)
T KOG1240|consen 1177 SWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVS 1256 (1431)
T ss_pred EecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceE
Confidence 111223469999999999999999999999999999887777664 234566666 444 33455
Q ss_pred EEec--CCCeEEEEeCCCceeeeee
Q psy1859 125 ATGG--SDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 125 ~~~~--~d~~i~iwd~~~~~~~~~~ 147 (162)
++++ ..+.|.+|++.+|.+..++
T Consensus 1257 vs~~~~~~nevs~wn~~~g~~~~vl 1281 (1431)
T KOG1240|consen 1257 VSAGSSSNNEVSTWNMETGLRQTVL 1281 (1431)
T ss_pred EEecccCCCceeeeecccCcceEEE
Confidence 5444 5788999999988665554
No 282
>KOG0280|consensus
Probab=98.56 E-value=1.1e-05 Score=53.17 Aligned_cols=91 Identities=18% Similarity=0.165 Sum_probs=69.4
Q ss_pred eEEEEecCCCCEEEEecCCCeEEEEeCCCcc--ceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCC-ceeee
Q psy1859 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFN-KKRLC 145 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~-~~~~~ 145 (162)
..++.|++.+..++++..+|.+.+-+..... .++.++.|.-+.... |+. +.+++++|++|+.+.-||+|. ++.+.
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~ 203 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW 203 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence 5688999999889999999999865555443 344778888888877 765 557899999999999999993 33343
Q ss_pred e-eccCCCceeEEEecC
Q psy1859 146 Q-FHRYDTGITSLCFSY 161 (162)
Q Consensus 146 ~-~~~~~~~v~~v~~~p 161 (162)
. .+.|...|.+|.=+|
T Consensus 204 ~n~kvH~~GV~SI~ss~ 220 (339)
T KOG0280|consen 204 HNSKVHTSGVVSIYSSP 220 (339)
T ss_pred ecceeeecceEEEecCC
Confidence 3 456888888887655
No 283
>KOG2066|consensus
Probab=98.56 E-value=2.8e-06 Score=62.69 Aligned_cols=107 Identities=23% Similarity=0.386 Sum_probs=74.8
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC-----CCEEEEecCCCeEEEEeCC
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE-----YNTFATGGSDGYVNIWDGF 98 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-----~~~l~~~~~d~~v~~wd~~ 98 (162)
+|.++++|+.||++.|-...... ....+.+. + ++.+++++|+ .+.+++|+.-| +.++.-+
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~--~~~~~df~--r----------piksial~Pd~~~~~sk~fv~GG~ag-lvL~er~ 146 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDD--EITQYDFK--R----------PIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERN 146 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCc--cceeEecC--C----------cceeEEeccchhhhhhhheeecCcce-EEEehhh
Confidence 58999999999999884333222 22333322 2 6899999998 36899999888 7676533
Q ss_pred C-ccc-eeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 99 N-KKR-LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 99 ~-~~~-~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
= +.. ...+....++|.++ |. |.+++.++.+| |++||+.+++.+..++
T Consensus 147 wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~ 196 (846)
T KOG2066|consen 147 WLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIP 196 (846)
T ss_pred hhcCccceeeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccC
Confidence 1 111 12345567899999 96 77899987776 8999998887666554
No 284
>KOG1409|consensus
Probab=98.56 E-value=1.2e-06 Score=58.82 Aligned_cols=77 Identities=19% Similarity=0.344 Sum_probs=63.4
Q ss_pred cceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccc-eeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 66 EKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKR-LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 66 ~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~-~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
+|.+.+.++.|.|...++.+|..|..+.+||+-..+- ...+.+|...+..+ .-+--+.+++++.||.|.+||.+...
T Consensus 195 ~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r 273 (404)
T KOG1409|consen 195 GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKR 273 (404)
T ss_pred CcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecccee
Confidence 3556899999999999999999999999999976543 34566777778777 66667789999999999999997543
No 285
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.55 E-value=1.5e-05 Score=53.56 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=92.1
Q ss_pred cccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC---
Q psy1859 13 KFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS--- 88 (162)
Q Consensus 13 ~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--- 88 (162)
......++.+|. ...++.+-.-|+-. +.+|..+ ......+...... | .----.||++|++|.+.-.
T Consensus 4 P~RgH~~a~~p~~~~avafaRRPG~~~-~v~D~~~--g~~~~~~~a~~gR-----H--FyGHg~fs~dG~~LytTEnd~~ 73 (305)
T PF07433_consen 4 PARGHGVAAHPTRPEAVAFARRPGTFA-LVFDCRT--GQLLQRLWAPPGR-----H--FYGHGVFSPDGRLLYTTENDYE 73 (305)
T ss_pred CccccceeeCCCCCeEEEEEeCCCcEE-EEEEcCC--CceeeEEcCCCCC-----E--EecCEEEcCCCCEEEEeccccC
Confidence 344456788884 55566666666633 2366655 2222222221111 0 1224568999998887644
Q ss_pred --CCeEEEEeCC-CccceeeeeecccceeEE-EcCCCCEEEEecC------------------CCeEEEEeCCCceeeee
Q psy1859 89 --DGYVNIWDGF-NKKRLCQFHRYDTGITSL-FHQEYNTFATGGS------------------DGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 89 --d~~v~~wd~~-~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~------------------d~~i~iwd~~~~~~~~~ 146 (162)
.|.|-+||.. ..+.+.++..+.-....+ +.|||+.|+++.. +..+.+.|..+|+.+.+
T Consensus 74 ~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q 153 (305)
T PF07433_consen 74 TGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQ 153 (305)
T ss_pred CCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeee
Confidence 4899999999 557777888777777888 9999988888742 23567778888887666
Q ss_pred ec----cCCCceeEEEecCC
Q psy1859 147 FH----RYDTGITSLCFSYD 162 (162)
Q Consensus 147 ~~----~~~~~v~~v~~~pd 162 (162)
.. .|...|..+++.+|
T Consensus 154 ~~Lp~~~~~lSiRHLa~~~~ 173 (305)
T PF07433_consen 154 VELPPDLHQLSIRHLAVDGD 173 (305)
T ss_pred eecCccccccceeeEEecCC
Confidence 33 37778888888765
No 286
>KOG4714|consensus
Probab=98.55 E-value=3.9e-07 Score=58.96 Aligned_cols=72 Identities=15% Similarity=0.172 Sum_probs=54.6
Q ss_pred EEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEE
Q psy1859 16 TRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVN 93 (162)
Q Consensus 16 ~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~ 93 (162)
+.+++-+|. ...+++|+.||.+.+|+++.-. -+...++.| ..++..+-|+|.. ..|++++.||.+.
T Consensus 182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~---~p~S~l~ah---------k~~i~eV~FHpk~p~~Lft~sedGslw 249 (319)
T KOG4714|consen 182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVA---MPVSLLKAH---------KAEIWEVHFHPKNPEHLFTCSEDGSLW 249 (319)
T ss_pred chhhhCCcccccEEEEecCCCeEEEEEccccc---chHHHHHHh---------hhhhhheeccCCCchheeEecCCCcEE
Confidence 677888885 5567788999999998876532 122223344 4479999999986 7899999999999
Q ss_pred EEeCCC
Q psy1859 94 IWDGFN 99 (162)
Q Consensus 94 ~wd~~~ 99 (162)
.||..+
T Consensus 250 ~wdas~ 255 (319)
T KOG4714|consen 250 HWDAST 255 (319)
T ss_pred EEcCCC
Confidence 999763
No 287
>KOG4190|consensus
Probab=98.54 E-value=4.5e-07 Score=64.65 Aligned_cols=136 Identities=16% Similarity=0.373 Sum_probs=87.7
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCccc---ceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEM---QKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
.++.++.-.+.+.+++++.|+++++|.+..+... ....+++..|. .+|.++.|-.+-+.++++ ||.
T Consensus 737 ~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHk---------k~i~~igfL~~lr~i~Sc--D~g 805 (1034)
T KOG4190|consen 737 KIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHK---------KPIHDIGFLADLRSIASC--DGG 805 (1034)
T ss_pred HhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhcc---------Ccccceeeeeccceeeec--cCc
Confidence 3444555556777999999999999887654311 12444444444 489999998877777665 899
Q ss_pred EEEEeCCCccceeeee--eccc---ceeEEEcCCCCEEEEe-cCCCeEEEEeCCCceeeeeec-----cCCCceeEEEec
Q psy1859 92 VNIWDGFNKKRLCQFH--RYDT---GITSLFHQEYNTFATG-GSDGYVNIWDGFNKKRLCQFH-----RYDTGITSLCFS 160 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~--~~~~---~v~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~-----~~~~~v~~v~~~ 160 (162)
+.+||..-++++..+. ...+ .+.++-+-+...++++ +...+++++|.+.+.-...++ +...-+.+++..
T Consensus 806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa 885 (1034)
T KOG4190|consen 806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVA 885 (1034)
T ss_pred ceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEec
Confidence 9999998887665332 1122 3333311144555555 678899999999886554443 333446666654
Q ss_pred C
Q psy1859 161 Y 161 (162)
Q Consensus 161 p 161 (162)
|
T Consensus 886 ~ 886 (1034)
T KOG4190|consen 886 D 886 (1034)
T ss_pred c
Confidence 3
No 288
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.53 E-value=4.3e-05 Score=52.81 Aligned_cols=78 Identities=17% Similarity=0.237 Sum_probs=62.3
Q ss_pred ceEEEEecCCCCEEEE-ec---------CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEec-CCCeEEEE
Q psy1859 70 PVNAISFHQEYNTFAT-GG---------SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGG-SDGYVNIW 136 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~-~~---------~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~-~d~~i~iw 136 (162)
...-++++|+++.+.. .. ..+.|.++|..+++.+..+.. ...+..+ ++||++ +|++.. .++.|.+.
T Consensus 249 g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsVi 327 (352)
T TIGR02658 249 GWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIF 327 (352)
T ss_pred cceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEE
Confidence 4455999999876665 31 225899999999998888864 4678888 999999 888776 57889999
Q ss_pred eCCCceeeeeec
Q psy1859 137 DGFNKKRLCQFH 148 (162)
Q Consensus 137 d~~~~~~~~~~~ 148 (162)
|..+++.+..+.
T Consensus 328 D~~t~k~i~~i~ 339 (352)
T TIGR02658 328 DAETGKELSSVN 339 (352)
T ss_pred ECcCCeEEeeec
Confidence 999999888873
No 289
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.53 E-value=3.1e-05 Score=52.40 Aligned_cols=120 Identities=10% Similarity=0.008 Sum_probs=79.6
Q ss_pred EEEEEeeCCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeec----cCcccceeceEEEEecCCCCEEEEec-CCC
Q psy1859 17 RCIKCFPNKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIK----EDGIEKIYPVNAISFHQEYNTFATGG-SDG 90 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~ 90 (162)
.-+++++++++++++... |.|.++..+... ..........|... +.... -+....+.|+++++++.. ..-
T Consensus 92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG-~l~~~v~~~~h~g~~p~~rQ~~~---h~H~a~~tP~~~~l~v~DLG~D 167 (346)
T COG2706 92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADG-SLQPVVQVVKHTGSGPHERQESP---HVHSANFTPDGRYLVVPDLGTD 167 (346)
T ss_pred eEEEECCCCCEEEEEEccCceEEEEEcccCC-ccccceeeeecCCCCCCccccCC---ccceeeeCCCCCEEEEeecCCc
Confidence 558899999999888554 788886664432 12222222222211 10111 277889999998888875 346
Q ss_pred eEEEEeCCCccceeee---eecccceeEE-EcCCCCEEEEec-CCCeEEEEeCCC
Q psy1859 91 YVNIWDGFNKKRLCQF---HRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDGFN 140 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~---~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~~ 140 (162)
.|.+|++..++....- ...+.....+ |+|++++....+ -+++|.+|....
T Consensus 168 ri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 168 RIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred eEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence 7999999987543321 1345567788 999999887776 578999999876
No 290
>KOG3617|consensus
Probab=98.52 E-value=3.5e-07 Score=68.05 Aligned_cols=107 Identities=16% Similarity=0.238 Sum_probs=82.9
Q ss_pred EEEEeeCCCeEEEEcC----CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 18 CIKCFPNKQGYVLSSI----EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~----~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
-++|+|...+|++++. .|.|.|+ .|... +..-.+.+- .++++.|+|..-.|+.|-.-|.+.
T Consensus 20 i~SWHPsePlfAVA~fS~er~GSVtIf-adtGE--Pqr~Vt~P~------------hatSLCWHpe~~vLa~gwe~g~~~ 84 (1416)
T KOG3617|consen 20 ISSWHPSEPLFAVASFSPERGGSVTIF-ADTGE--PQRDVTYPV------------HATSLCWHPEEFVLAQGWEMGVSD 84 (1416)
T ss_pred ccccCCCCceeEEEEecCCCCceEEEE-ecCCC--CCcccccce------------ehhhhccChHHHHHhhccccceeE
Confidence 3669999999988843 4778874 34333 222222222 367899999988899999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~ 139 (162)
+|...+.+.......|..++..+ ||++|..++++..-|.+.+|...
T Consensus 85 v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 85 VQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred EEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 99988766555556788899999 99999999999999999999875
No 291
>KOG2695|consensus
Probab=98.52 E-value=2.3e-07 Score=62.24 Aligned_cols=82 Identities=18% Similarity=0.182 Sum_probs=66.8
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCc-----cceeeeeecccceeEE--EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNK-----KRLCQFHRYDTGITSL--FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~-----~~~~~~~~~~~~v~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
.|.++.|+..++++..|..+|.|..+|++.+ .+...+ -|.+.++++ ..-++++|++.+-+|+|++||+|--+
T Consensus 254 DVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K 332 (425)
T KOG2695|consen 254 DVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATK 332 (425)
T ss_pred hHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhh
Confidence 5889999988999999999999999999865 223333 478889988 44378899999999999999998766
Q ss_pred e---eeeeccCCC
Q psy1859 143 R---LCQFHRYDT 152 (162)
Q Consensus 143 ~---~~~~~~~~~ 152 (162)
+ +.++.+|-.
T Consensus 333 ~~~~V~qYeGHvN 345 (425)
T KOG2695|consen 333 CKKSVMQYEGHVN 345 (425)
T ss_pred cccceeeeecccc
Confidence 5 888877743
No 292
>KOG0309|consensus
Probab=98.49 E-value=8.2e-07 Score=65.15 Aligned_cols=137 Identities=15% Similarity=0.325 Sum_probs=96.2
Q ss_pred ccEEEEEEeeC--CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCC
Q psy1859 14 FQTRCIKCFPN--KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDG 90 (162)
Q Consensus 14 ~~~~~i~~~~~--~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~ 90 (162)
..+..+.|+|. ..+-++........+|.+...+ .....+.+-+ |..+++.+-|+|+. ..+++++.|.
T Consensus 68 w~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss-~~aIef~lhg---------hsraitd~n~~~q~pdVlatcsvdt 137 (1081)
T KOG0309|consen 68 WQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS-SNAIEFVLHG---------HSRAITDINFNPQHPDVLATCSVDT 137 (1081)
T ss_pred chhcceecccCCCCceeEEecCcchhhhhhhhcCC-ccceEEEEec---------CccceeccccCCCCCcceeeccccc
Confidence 34455677764 3445555556666677665443 1223333333 34489999999987 6889999999
Q ss_pred eEEEEeCCCc-cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEEEec
Q psy1859 91 YVNIWDGFNK-KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 91 ~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~ 160 (162)
.+..||+++. .++..+.........+ |+.....+.+.+....|.+||++.| .++..+++|...|+.++|.
T Consensus 138 ~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fn 210 (1081)
T KOG0309|consen 138 YVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFN 210 (1081)
T ss_pred cceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHh
Confidence 9999999985 5566666667777788 8885555666667788999999866 4677778887778777664
No 293
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.46 E-value=1.8e-05 Score=62.21 Aligned_cols=123 Identities=10% Similarity=0.017 Sum_probs=78.9
Q ss_pred EEEEEeeCCCeEE-EEcCCCcEEEEEecCCcccceeeeeeeeee-----eccC----c---ccceeceEEEEecCCCCEE
Q psy1859 17 RCIKCFPNKQGYV-LSSIEGRAAVEYLDTGPEMQKMKYAFKCHR-----IKED----G---IEKIYPVNAISFHQEYNTF 83 (162)
Q Consensus 17 ~~i~~~~~~~~l~-~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~-----~~~~----~---~~~~~~v~~~~~~p~~~~l 83 (162)
..|+++|+++.++ +-+.++.|++|+.+... ..... .+.. .... + ........+++++++|.++
T Consensus 743 ~GIavspdG~~LYVADs~n~~Irv~D~~tg~--~~~~~--gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LY 818 (1057)
T PLN02919 743 SGISLSPDLKELYIADSESSSIRALDLKTGG--SRLLA--GGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIY 818 (1057)
T ss_pred cEEEEeCCCCEEEEEECCCCeEEEEECCCCc--EEEEE--ecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEE
Confidence 4589999988554 44666888885544321 11110 0000 0000 0 0011134689999999999
Q ss_pred EEecCCCeEEEEeCCCccceeeee-------------ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee
Q psy1859 84 ATGGSDGYVNIWDGFNKKRLCQFH-------------RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR 143 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~~~~~~~~~-------------~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~ 143 (162)
++-..++.|++||..++....... ..-.....+ ++++|+++++-+.++.|++||+.+++.
T Consensus 819 VADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 819 VADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 999999999999998765432211 011245677 999999888888999999999988764
No 294
>KOG4640|consensus
Probab=98.45 E-value=1.5e-06 Score=62.48 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=71.3
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceE-EEEecCCCCEEEEecCCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVN-AISFHQEYNTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~l~~~~~d~ 90 (162)
+...+.-+.|+|.-..+|+++.+|.+.++.++ ...+.++..+.. .++ +++|.|+|++++.|-.||
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-----~qRlwtip~p~~---------~v~~sL~W~~DGkllaVg~kdG 84 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-----WQRLWTIPIPGE---------NVTASLCWRPDGKLLAVGFKDG 84 (665)
T ss_pred cccceEEEEEcCccchhheeccCCcEEEEEec-----cceeEeccCCCC---------ccceeeeecCCCCEEEEEecCC
Confidence 44566778999999999999999999987666 345666665544 244 999999999999999999
Q ss_pred eEEEEeCCCccceeeee-ecccceeEE-Ec
Q psy1859 91 YVNIWDGFNKKRLCQFH-RYDTGITSL-FH 118 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~-~~~~~v~~~-~~ 118 (162)
+|++-|+.++..+.... .....+..+ |+
T Consensus 85 ~I~L~Dve~~~~l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 85 TIRLHDVEKGGRLVSFLFSVETDISKGIWD 114 (665)
T ss_pred eEEEEEccCCCceeccccccccchheeecc
Confidence 99999999987665521 234556666 65
No 295
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.43 E-value=2.4e-05 Score=60.57 Aligned_cols=73 Identities=10% Similarity=0.087 Sum_probs=52.2
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+..+.+.++...++.+..+|.|.+...+... .......-+.-. ..|.+++||||+.+++..+.++.+.
T Consensus 76 ~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~--~~~~~E~VG~vd--------~GI~a~~WSPD~Ella~vT~~~~l~ 145 (928)
T PF04762_consen 76 DKIVSFQYLADSESLCIALASGDIILVREDPDP--DEDEIEIVGSVD--------SGILAASWSPDEELLALVTGEGNLL 145 (928)
T ss_pred CcEEEEEeccCCCcEEEEECCceEEEEEccCCC--CCceeEEEEEEc--------CcEEEEEECCCcCEEEEEeCCCEEE
Confidence 467778888999999999999999996444322 112222222221 2699999999999999998888887
Q ss_pred EEe
Q psy1859 94 IWD 96 (162)
Q Consensus 94 ~wd 96 (162)
+-+
T Consensus 146 ~mt 148 (928)
T PF04762_consen 146 LMT 148 (928)
T ss_pred EEe
Confidence 653
No 296
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.41 E-value=3.6e-05 Score=53.19 Aligned_cols=99 Identities=12% Similarity=0.026 Sum_probs=69.7
Q ss_pred CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe-c---------CCCeEEEEeCCCcccee
Q psy1859 35 GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG-G---------SDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 35 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~---------~d~~v~~wd~~~~~~~~ 104 (162)
+++.+ +|..+ .+.+-.+..-.. -..+ ++|+++.+.++ + .+..|.+||..+.+.+.
T Consensus 27 ~~v~V--iD~~~--~~v~g~i~~G~~----------P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~ 91 (352)
T TIGR02658 27 TQVYT--IDGEA--GRVLGMTDGGFL----------PNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIA 91 (352)
T ss_pred ceEEE--EECCC--CEEEEEEEccCC----------Ccee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEe
Confidence 77888 66655 444433332221 2334 89999766655 4 57999999999999888
Q ss_pred eeeeccc-------ceeEE-EcCCCCEEEEec-C-CCeEEEEeCCCceeeeeec
Q psy1859 105 QFHRYDT-------GITSL-FHQEYNTFATGG-S-DGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 105 ~~~~~~~-------~v~~~-~~~~~~~l~~~~-~-d~~i~iwd~~~~~~~~~~~ 148 (162)
++..... ....+ ++|||+++++.. . +..+.+.|+.+++.+..+.
T Consensus 92 ~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~ 145 (352)
T TIGR02658 92 DIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMD 145 (352)
T ss_pred EEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEe
Confidence 7764222 22245 999999999887 3 6899999999998777664
No 297
>KOG2314|consensus
Probab=98.39 E-value=7.7e-06 Score=58.32 Aligned_cols=118 Identities=11% Similarity=0.027 Sum_probs=78.9
Q ss_pred cccccEEEEEEeeCCCeEEEEcCC---CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe-
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIE---GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG- 86 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~---g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~- 86 (162)
.++..+-..+|-|.|+.+++-+.. .++.+|.++........+..+.. . ..+.+.|+|.|+.++.+
T Consensus 443 elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~---------~~N~vfwsPkG~fvvva~ 511 (698)
T KOG2314|consen 443 ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--K---------FANTVFWSPKGRFVVVAA 511 (698)
T ss_pred ecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--c---------ccceEEEcCCCcEEEEEE
Confidence 456677778899999888765433 56778766644322334433333 1 47899999999988765
Q ss_pred --cCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC------CCeEEEEeCC
Q psy1859 87 --GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS------DGYVNIWDGF 139 (162)
Q Consensus 87 --~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~------d~~i~iwd~~ 139 (162)
+..|.+..+|+.-......-.......+.+ |.|.|+|++|++. |.--++|+++
T Consensus 512 l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfq 573 (698)
T KOG2314|consen 512 LVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQ 573 (698)
T ss_pred ecccccceEEEecchhhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEee
Confidence 457899999987533322222223445677 9999999999974 4456677764
No 298
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.36 E-value=0.00011 Score=57.99 Aligned_cols=123 Identities=8% Similarity=0.016 Sum_probs=74.5
Q ss_pred EEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeee--eccCc----ccceeceEEEEecCCCC-EEEEecC
Q psy1859 17 RCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR--IKEDG----IEKIYPVNAISFHQEYN-TFATGGS 88 (162)
Q Consensus 17 ~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~v~~~~~~p~~~-~l~~~~~ 88 (162)
..++++| ++..+++.+.++.|.+| +...+.. ..+.+.. ....+ ...-.....|+++|++. ++++-+.
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~--d~~~g~v---~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~ 760 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEY--NISDGVT---RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE 760 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEE--ECCCCeE---EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC
Confidence 4689999 45556666667777774 4433111 1111110 00000 00112466899999986 6666677
Q ss_pred CCeEEEEeCCCccceeee-------------eec--------ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceee
Q psy1859 89 DGYVNIWDGFNKKRLCQF-------------HRY--------DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRL 144 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~-------------~~~--------~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 144 (162)
++.|++||+.++...... ... -.....+ ++++|.++++-..++.|++||..++...
T Consensus 761 n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~ 838 (1057)
T PLN02919 761 SSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVT 838 (1057)
T ss_pred CCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEE
Confidence 899999999875421100 000 0123467 8999998888889999999999877644
No 299
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.24 E-value=8e-06 Score=54.52 Aligned_cols=126 Identities=19% Similarity=0.202 Sum_probs=80.9
Q ss_pred ccEEEEEEeeCC--CeEEEEcCCCcEEEEEecCCccc---------------ceeee---eee------------eeeec
Q psy1859 14 FQTRCIKCFPNK--QGYVLSSIEGRAAVEYLDTGPEM---------------QKMKY---AFK------------CHRIK 61 (162)
Q Consensus 14 ~~~~~i~~~~~~--~~l~~~~~~g~i~i~~~~~~~~~---------------~~~~~---~~~------------~~~~~ 61 (162)
..+..|.|..++ ..++..+.|.++++|.+-...-+ ...+. .+. ..+..
T Consensus 86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~r 165 (460)
T COG5170 86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCR 165 (460)
T ss_pred HHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccce
Confidence 345668887653 45778899999999886433100 00000 000 00000
Q ss_pred cCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCcccee---eeeec-----ccceeEE-EcCC-CCEEEEecCCC
Q psy1859 62 EDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC---QFHRY-----DTGITSL-FHQE-YNTFATGGSDG 131 (162)
Q Consensus 62 ~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~---~~~~~-----~~~v~~~-~~~~-~~~l~~~~~d~ 131 (162)
-....|+..+.++.|+.+...++++ .|-.|.+|++....... .++.+ ...|++. |+|. -..+..++..|
T Consensus 166 vyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG 244 (460)
T COG5170 166 VYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG 244 (460)
T ss_pred eccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC
Confidence 1345688899999999988877766 57889999987543222 22233 2356777 9994 45677888999
Q ss_pred eEEEEeCCC
Q psy1859 132 YVNIWDGFN 140 (162)
Q Consensus 132 ~i~iwd~~~ 140 (162)
.|++.|+|.
T Consensus 245 ~Ikl~DlRq 253 (460)
T COG5170 245 EIKLNDLRQ 253 (460)
T ss_pred cEEehhhhh
Confidence 999999984
No 300
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.18 E-value=8.4e-06 Score=36.62 Aligned_cols=37 Identities=24% Similarity=0.478 Sum_probs=31.4
Q ss_pred cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEe
Q psy1859 101 KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWD 137 (162)
Q Consensus 101 ~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd 137 (162)
+++..+..+...+.++ |++++.++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3455566778889999 999999999999999999996
No 301
>KOG1645|consensus
Probab=98.17 E-value=8.3e-06 Score=55.96 Aligned_cols=76 Identities=13% Similarity=0.127 Sum_probs=62.8
Q ss_pred cceeceEEEEecCCCC-EEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCCce
Q psy1859 66 EKIYPVNAISFHQEYN-TFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 66 ~~~~~v~~~~~~p~~~-~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~~ 142 (162)
.+...|.+++|+|..+ ++..++.+..|.+.|+++...+..+..+ ..+.++ |..|.. ++..|...|.|.|||++..+
T Consensus 191 ~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 191 GEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred ccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 3555899999999986 7888999999999999998888777766 667777 887554 67777789999999998653
No 302
>KOG1275|consensus
Probab=98.16 E-value=4e-05 Score=57.82 Aligned_cols=125 Identities=18% Similarity=0.173 Sum_probs=83.4
Q ss_pred EeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC---------CCe
Q psy1859 21 CFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS---------DGY 91 (162)
Q Consensus 21 ~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~---------d~~ 91 (162)
...+++++.+|...|+|.+ .|+.+ .+.+.++.+|.. .+.+++ -.|++|++|+. |..
T Consensus 183 mR~Nnr~lf~G~t~G~V~L--rD~~s--~~~iht~~aHs~---------siSDfD--v~GNlLitCG~S~R~~~l~~D~F 247 (1118)
T KOG1275|consen 183 MRYNNRNLFCGDTRGTVFL--RDPNS--FETIHTFDAHSG---------SISDFD--VQGNLLITCGYSMRRYNLAMDPF 247 (1118)
T ss_pred EEecCcEEEeecccceEEe--ecCCc--Cceeeeeecccc---------ceeeee--ccCCeEEEeecccccccccccch
Confidence 4456789999999999999 67766 677778787765 566654 46889999875 567
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeC---CCce-eeeeeccCCCceeEEEecC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDG---FNKK-RLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~---~~~~-~~~~~~~~~~~v~~v~~~p 161 (162)
|++||++..+.+.-+.-+.++ .-+ |+| -...+++++..|...+.|. .+.. .+..+....+.+..+++++
T Consensus 248 vkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSs 322 (1118)
T KOG1275|consen 248 VKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISS 322 (1118)
T ss_pred hhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecC
Confidence 899999987665544433332 223 777 3456788888888888883 2221 1222233344566666665
No 303
>KOG3621|consensus
Probab=98.14 E-value=5.1e-05 Score=55.61 Aligned_cols=109 Identities=15% Similarity=0.044 Sum_probs=78.1
Q ss_pred EEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy1859 20 KCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFN 99 (162)
Q Consensus 20 ~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~ 99 (162)
++...+++++.|+..|.++++.-.... . .++...+.. ..+..+..|++..++++|+..|.|.++.+..
T Consensus 40 c~dst~~~l~~GsS~G~lyl~~R~~~~--~-~~~~~~~~~---------~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~ 107 (726)
T KOG3621|consen 40 CVDATEEYLAMGSSAGSVYLYNRHTGE--M-RKLKNEGAT---------GITCVRSVSSVEYLVAAGTASGRVSVFQLNK 107 (726)
T ss_pred EeecCCceEEEecccceEEEEecCchh--h-hcccccCcc---------ceEEEEEecchhHhhhhhcCCceEEeehhhc
Confidence 455678999999999999994433221 1 111211111 1466677799889999999999999998887
Q ss_pred cccee---e--e-eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 100 KKRLC---Q--F-HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 100 ~~~~~---~--~-~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
+.+-. . . +.|...|+++ |++++..+++|...|+|..-.+..
T Consensus 108 ~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 108 ELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 43211 1 1 1356789999 999999999999999998887765
No 304
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.12 E-value=0.00027 Score=50.61 Aligned_cols=123 Identities=14% Similarity=0.156 Sum_probs=66.7
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.....++++|+++++++ ..+|...|+. ... .+.... + ......|.+ ...+++-..+..|.
T Consensus 33 ~~p~~ls~npngr~v~V-~g~geY~iyt--~~~--~r~k~~--G------------~g~~~vw~~-~n~yAv~~~~~~I~ 92 (443)
T PF04053_consen 33 IYPQSLSHNPNGRFVLV-CGDGEYEIYT--ALA--WRNKAF--G------------SGLSFVWSS-RNRYAVLESSSTIK 92 (443)
T ss_dssp S--SEEEE-TTSSEEEE-EETTEEEEEE--TTT--TEEEEE--E------------E-SEEEE-T-SSEEEEE-TTS-EE
T ss_pred cCCeeEEECCCCCEEEE-EcCCEEEEEE--ccC--Cccccc--C------------ceeEEEEec-CccEEEEECCCeEE
Confidence 34567999999998888 5667777754 211 111111 1 355788888 44577777788898
Q ss_pred EEeCCCccceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++.--+.+....+... ..+..+|. |.+|...+.+ .|.+||..+++.++++... +|..|.|++|
T Consensus 93 I~kn~~~~~~k~i~~~-~~~~~If~--G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~ 155 (443)
T PF04053_consen 93 IYKNFKNEVVKSIKLP-FSVEKIFG--GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDD 155 (443)
T ss_dssp EEETTEE-TT-----S-S-EEEEE---SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TT
T ss_pred EEEcCccccceEEcCC-cccceEEc--CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECC
Confidence 8633334343344321 22444444 7777777555 8999999999988888633 3888899875
No 305
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.12 E-value=3.2e-05 Score=54.94 Aligned_cols=118 Identities=10% Similarity=0.052 Sum_probs=71.2
Q ss_pred ccccEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe-cCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG-GSD 89 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d 89 (162)
..++...-+|+|||+.++.+ ..+|...||.+|........ +..... .-..-.|+|+|+.++-. +..
T Consensus 236 ~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~---Lt~~~g---------i~~~Ps~spdG~~ivf~Sdr~ 303 (425)
T COG0823 236 FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR---LTNGFG---------INTSPSWSPDGSKIVFTSDRG 303 (425)
T ss_pred cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee---cccCCc---------cccCccCCCCCCEEEEEeCCC
Confidence 45555667899999887755 66788888888876533222 111111 12367799999776654 445
Q ss_pred Ce--EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-CCe--EEEEeCCCce
Q psy1859 90 GY--VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-DGY--VNIWDGFNKK 142 (162)
Q Consensus 90 ~~--v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~~--i~iwd~~~~~ 142 (162)
|. |.+.+...+.. ..+......-..- |+|||++++..+. +|. |.+.|+.++.
T Consensus 304 G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 304 GRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred CCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 54 55556554443 3333322222244 9999999888764 343 6666665554
No 306
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.10 E-value=9.3e-05 Score=52.42 Aligned_cols=112 Identities=18% Similarity=0.297 Sum_probs=76.5
Q ss_pred cccccEEEEEEeeCCCeEEEEcC--CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSI--EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~--~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.++++|...+|.|.++.|++.+. ...+.+ ++... ...+.+... .-..+.|+|.+++++.++.
T Consensus 272 ~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~--~~lr~---Nl~~~~Pe~-----------~rNT~~fsp~~r~il~agF 335 (561)
T COG5354 272 DLKDPVHDFTWEPLSSRFAVISGYMPASVSV--FDLRG---NLRFYFPEQ-----------KRNTIFFSPHERYILFAGF 335 (561)
T ss_pred cccccceeeeecccCCceeEEecccccceee--ccccc---ceEEecCCc-----------ccccccccCcccEEEEecC
Confidence 56889999999999888877654 445555 55433 233332222 2346789999988888765
Q ss_pred C---CeEEEEeCCCcccee-eeeecccceeEE-EcCCCCEEEEec------CCCeEEEEeCCC
Q psy1859 89 D---GYVNIWDGFNKKRLC-QFHRYDTGITSL-FHQEYNTFATGG------SDGYVNIWDGFN 140 (162)
Q Consensus 89 d---~~v~~wd~~~~~~~~-~~~~~~~~v~~~-~~~~~~~l~~~~------~d~~i~iwd~~~ 140 (162)
| |.+-+||......+. .+.+ ....-+ |+|+++++.+.. .|..++|||+..
T Consensus 336 ~nl~gni~i~~~~~rf~~~~~~~~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 336 DNLQGNIEIFDPAGRFKVAGAFNG--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred CccccceEEeccCCceEEEEEeec--CCceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence 5 789999987654433 4432 223344 999999988874 478899999853
No 307
>KOG2066|consensus
Probab=98.09 E-value=0.0001 Score=54.91 Aligned_cols=113 Identities=20% Similarity=0.265 Sum_probs=80.0
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCcccee
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~ 104 (162)
+++|+.|+.+|.+++.+.+... .+...|.. . .-+|.++++|+.||.|.+-.+.+.+...
T Consensus 49 ~~~~~~GtH~g~v~~~~~~~~~------~~~~~~s~----------~-----~~~Gey~asCS~DGkv~I~sl~~~~~~~ 107 (846)
T KOG2066|consen 49 DKFFALGTHRGAVYLTTCQGNP------KTNFDHSS----------S-----ILEGEYVASCSDDGKVVIGSLFTDDEIT 107 (846)
T ss_pred cceeeeccccceEEEEecCCcc------cccccccc----------c-----ccCCceEEEecCCCcEEEeeccCCccce
Confidence 6789999999999995544321 11122221 1 5678999999999999999998887776
Q ss_pred eeeecccceeEE-EcCC-----CCEEEEecCCCeEEEEeCC---CceeeeeeccCCCceeEEEecC
Q psy1859 105 QFHRYDTGITSL-FHQE-----YNTFATGGSDGYVNIWDGF---NKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 105 ~~~~~~~~v~~~-~~~~-----~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.+. ...++.++ ++|+ .+.+++|+..| +.++.-+ ....+ .+....++|.++.|..
T Consensus 108 ~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~g 170 (846)
T KOG2066|consen 108 QYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWRG 170 (846)
T ss_pred eEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEecC
Confidence 664 45678888 8886 56889998888 7666532 12222 3555677899998864
No 308
>KOG2079|consensus
Probab=98.08 E-value=2.6e-05 Score=59.65 Aligned_cols=97 Identities=19% Similarity=0.255 Sum_probs=69.8
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
.+..++.|++.|.+-..++..+ .... |... .-.++|++++|+.+|.+++.|-.+|.|.+||...++.+
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~n---L~~~-----~~ne----~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l 165 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGN---LGPL-----HQNE----RVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKIL 165 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcc---cchh-----hcCC----ccCCcceeeEecCCCceeccccCCCcEEEEEccCCcce
Confidence 3556778888888777333221 1111 1111 12348999999999999999999999999999999999
Q ss_pred eeeeecccceeEE----EcCCCCEEEEecCCCe
Q psy1859 104 CQFHRYDTGITSL----FHQEYNTFATGGSDGY 132 (162)
Q Consensus 104 ~~~~~~~~~v~~~----~~~~~~~l~~~~~d~~ 132 (162)
+.+..+..+.+.+ +..++..+.++...|.
T Consensus 166 ~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 166 KVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred eeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence 9888877776665 4445667888887775
No 309
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.08 E-value=6.5e-05 Score=53.40 Aligned_cols=132 Identities=17% Similarity=0.164 Sum_probs=72.8
Q ss_pred EEEEEeeCCCeEEEEcCC--CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCCCe--
Q psy1859 17 RCIKCFPNKQGYVLSSIE--GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSDGY-- 91 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~--g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~~-- 91 (162)
..-+|+|++..++..+.. +.-++|.++...+....+..+.++ -...+|+|+|+.++ +...|+.
T Consensus 196 ~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~------------~~~P~fspDG~~l~f~~~rdg~~~ 263 (425)
T COG0823 196 LTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGN------------NGAPAFSPDGSKLAFSSSRDGSPD 263 (425)
T ss_pred eccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCc------------cCCccCCCCCCEEEEEECCCCCcc
Confidence 445688888776554222 212344455555445555554444 34678999996665 4456665
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEec-CCC--eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG-SDG--YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~--~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|++.|+..+. ...+....+.-..- |+|||++++..+ ..| .|.++|...+.. ..+......-....|+||
T Consensus 264 iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~Spd 336 (425)
T COG0823 264 IYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPD 336 (425)
T ss_pred EEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCC
Confidence 5556776655 33344333333344 999999877765 334 566777765543 333222222224555554
No 310
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.03 E-value=4.9e-05 Score=53.76 Aligned_cols=132 Identities=14% Similarity=0.082 Sum_probs=86.0
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC-
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG- 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~- 90 (162)
-..++..+++||.|.+|++.... .|.+| .... ......+. |. .|..+.|+|.+++|.+=+..+
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~-~V~~~--~g~~--~~~l~~~~-~~----------~V~~~~fSP~~kYL~tw~~~pi 94 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAA-GVECW--GGPS--KAKLVRFR-HP----------DVKYLDFSPNEKYLVTWSREPI 94 (561)
T ss_pred cCcchhheeecCcchheehhhcc-ceEEc--cccc--hhheeeee-cC----------CceecccCcccceeeeeccCCc
Confidence 34566778999999998886554 46664 3322 11222222 32 499999999999998865433
Q ss_pred --------------eEEEEeCCCccceeeeeecccc--ee-EE-EcCCCCEEEEecCCCeEEEEeCCCceee-eeec-cC
Q psy1859 91 --------------YVNIWDGFNKKRLCQFHRYDTG--IT-SL-FHQEYNTFATGGSDGYVNIWDGFNKKRL-CQFH-RY 150 (162)
Q Consensus 91 --------------~v~~wd~~~~~~~~~~~~~~~~--v~-~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~-~~ 150 (162)
.+.+||..++..+..+.....+ .. -+ |+-+..|++-. -...++|+++ ++... ..+. ..
T Consensus 95 ~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr 172 (561)
T COG5354 95 IEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLR 172 (561)
T ss_pred cChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhcc
Confidence 4999999999888888765544 44 34 88887777666 4457999997 44321 1111 11
Q ss_pred CCceeEEEecC
Q psy1859 151 DTGITSLCFSY 161 (162)
Q Consensus 151 ~~~v~~v~~~p 161 (162)
...|....|+|
T Consensus 173 ~~gi~dFsisP 183 (561)
T COG5354 173 PVGILDFSISP 183 (561)
T ss_pred ccceeeEEecC
Confidence 34677777776
No 311
>KOG0309|consensus
Probab=98.02 E-value=2.7e-05 Score=57.63 Aligned_cols=115 Identities=15% Similarity=0.282 Sum_probs=82.7
Q ss_pred cEEEEEEeeCC-CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 15 QTRCIKCFPNK-QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 15 ~~~~i~~~~~~-~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.++.+.|+|+. ..+++++.|-.+..|+..... ...+....-.. +...++|+-...-+++.+....++
T Consensus 116 aitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~---~p~ys~~~w~s---------~asqVkwnyk~p~vlasshg~~i~ 183 (1081)
T KOG0309|consen 116 AITDINFNPQHPDVLATCSVDTYVHAWDMRSPH---RPFYSTSSWRS---------AASQVKWNYKDPNVLASSHGNDIF 183 (1081)
T ss_pred ceeccccCCCCCcceeeccccccceeeeccCCC---cceeeeecccc---------cCceeeecccCcchhhhccCCceE
Confidence 34556688864 467888999999996654322 23333222222 477899988776666777788899
Q ss_pred EEeCCCc-cceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCc
Q psy1859 94 IWDGFNK-KRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 94 ~wd~~~~-~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
+||++.+ .++..++.|...+..+ |.. ....+.+.+.|++|+.||....
T Consensus 184 vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 184 VWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred EEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 9999986 5677888877778777 665 4456888999999999998644
No 312
>KOG4649|consensus
Probab=98.01 E-value=0.00078 Score=44.34 Aligned_cols=113 Identities=12% Similarity=0.042 Sum_probs=77.6
Q ss_pred EEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeee-eeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeC
Q psy1859 20 KCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAF-KCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDG 97 (162)
Q Consensus 20 ~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~ 97 (162)
...++ ..+++.|+..+.+.- .|..+ ....+.. -+.+ +.+-+.- -|.+++.|...|.+++.+.
T Consensus 17 VV~~dskT~v~igSHs~~~~a--vd~~s--G~~~We~ilg~R-----------iE~sa~v-vgdfVV~GCy~g~lYfl~~ 80 (354)
T KOG4649|consen 17 VVCNDSKTLVVIGSHSGIVIA--VDPQS--GNLIWEAILGVR-----------IECSAIV-VGDFVVLGCYSGGLYFLCV 80 (354)
T ss_pred EEecCCceEEEEecCCceEEE--ecCCC--CcEEeehhhCce-----------eeeeeEE-ECCEEEEEEccCcEEEEEe
Confidence 34444 456677788887776 67666 3333321 1122 2221111 2677999999999999999
Q ss_pred CCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 98 FNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
++|..+..+...+..-... ..+++.++..++.|+..+..|.++..++...+
T Consensus 81 ~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 81 KTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred cchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence 9998888776543322233 78899999999999999999999988877654
No 313
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.99 E-value=1.9e-05 Score=35.36 Aligned_cols=28 Identities=29% Similarity=0.706 Sum_probs=25.8
Q ss_pred eceEEEEecCCCCEEEEecCCCeEEEEe
Q psy1859 69 YPVNAISFHQEYNTFATGGSDGYVNIWD 96 (162)
Q Consensus 69 ~~v~~~~~~p~~~~l~~~~~d~~v~~wd 96 (162)
..|.++.|++.+..+++++.|+.+++|+
T Consensus 13 ~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 13 GPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred CceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3799999999999999999999999996
No 314
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.95 E-value=5.3e-05 Score=36.43 Aligned_cols=33 Identities=27% Similarity=0.404 Sum_probs=29.4
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
.|..++|+|...+++.++.+|.|.++.+ +++.+
T Consensus 13 ~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 13 RVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI 45 (47)
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence 6999999999999999999999999998 55543
No 315
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.94 E-value=0.0019 Score=42.80 Aligned_cols=132 Identities=11% Similarity=0.086 Sum_probs=76.0
Q ss_pred EEEeeCCCeEEEEcCCCcEEEEEecCCcccceeee--eeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEe
Q psy1859 19 IKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKY--AFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWD 96 (162)
Q Consensus 19 i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd 96 (162)
++.+++|+.||. ..|..|.|..-...- ...+. .....+. ..-+-++||||+.+||.+...|.|+++|
T Consensus 3 ~~~~~~Gk~lAi-~qd~~iEiRsa~Ddf--~si~~kcqVpkD~~--------PQWRkl~WSpD~tlLa~a~S~G~i~vfd 71 (282)
T PF15492_consen 3 LALSSDGKLLAI-LQDQCIEIRSAKDDF--SSIIGKCQVPKDPN--------PQWRKLAWSPDCTLLAYAESTGTIRVFD 71 (282)
T ss_pred eeecCCCcEEEE-EeccEEEEEeccCCc--hheeEEEecCCCCC--------chheEEEECCCCcEEEEEcCCCeEEEEe
Confidence 456677876666 566777763322111 11111 1111111 1467899999999999999999999999
Q ss_pred CCCccceeeeee-------cccceeEE-EcCC------CCEEEEecCCCeEEEEeCCC-----ceeeeeec---cCCCce
Q psy1859 97 GFNKKRLCQFHR-------YDTGITSL-FHQE------YNTFATGGSDGYVNIWDGFN-----KKRLCQFH---RYDTGI 154 (162)
Q Consensus 97 ~~~~~~~~~~~~-------~~~~v~~~-~~~~------~~~l~~~~~d~~i~iwd~~~-----~~~~~~~~---~~~~~v 154 (162)
+.. ..+..+.. ....|..+ |-+. ...|++-..+|.++=|-+-. .+..+.+. .+...|
T Consensus 72 l~g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi 150 (282)
T PF15492_consen 72 LMG-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGI 150 (282)
T ss_pred ccc-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCce
Confidence 975 33333322 12344555 4331 12456666777777665422 12333332 246688
Q ss_pred eEEEecCC
Q psy1859 155 TSLCFSYD 162 (162)
Q Consensus 155 ~~v~~~pd 162 (162)
.++.++|.
T Consensus 151 ~~~vy~p~ 158 (282)
T PF15492_consen 151 NSAVYHPK 158 (282)
T ss_pred eEEEEcCC
Confidence 99988874
No 316
>KOG1832|consensus
Probab=97.93 E-value=6.4e-06 Score=62.03 Aligned_cols=130 Identities=16% Similarity=0.183 Sum_probs=86.6
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC--CeEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD--GYVN 93 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d--~~v~ 93 (162)
-+|++|+-+.+.|++|+..|.|++ ++..+ ........+|.. +|+.+.-+.+|..+++.+.- ....
T Consensus 1104 fTc~afs~~~~hL~vG~~~Geik~--~nv~s--G~~e~s~ncH~S---------avT~vePs~dgs~~Ltsss~S~Plsa 1170 (1516)
T KOG1832|consen 1104 FTCIAFSGGTNHLAVGSHAGEIKI--FNVSS--GSMEESVNCHQS---------AVTLVEPSVDGSTQLTSSSSSSPLSA 1170 (1516)
T ss_pred eeeEEeecCCceEEeeeccceEEE--EEccC--cccccccccccc---------ccccccccCCcceeeeeccccCchHH
Confidence 478999999999999999999999 55444 333444566665 79999989899766655433 3567
Q ss_pred EEeCCC-ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec-c---CCCceeEEEecCC
Q psy1859 94 IWDGFN-KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-R---YDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~---~~~~v~~v~~~pd 162 (162)
+|++.. +.+...+. .-.++ |+.....-+.|+......+||+.++..+.++- + -.-.-+...|+|+
T Consensus 1171 LW~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~ 1241 (1516)
T KOG1832|consen 1171 LWDASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPC 1241 (1516)
T ss_pred HhccccccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCC
Confidence 999875 33443443 23345 77655555566666678999999987766632 1 1112245667764
No 317
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.93 E-value=0.0016 Score=43.01 Aligned_cols=104 Identities=15% Similarity=0.063 Sum_probs=65.7
Q ss_pred EEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 17 RCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
..|+|+|+++.|+.+ +..+.|..++++...........+..... .....-.+++..+|++.++....+.|.++
T Consensus 137 NGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~g~pDG~~vD~~G~l~va~~~~~~I~~~ 210 (246)
T PF08450_consen 137 NGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPG------GPGYPDGLAVDSDGNLWVADWGGGRIVVF 210 (246)
T ss_dssp EEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SS------SSCEEEEEEEBTTS-EEEEEETTTEEEEE
T ss_pred cceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCC------CCcCCCcceEcCCCCEEEEEcCCCEEEEE
Confidence 569999999877654 66677666666543311111111110110 00136789999999999988889999999
Q ss_pred eCCCccceeeeeecccceeEE-Ec-CCCCEEEEe
Q psy1859 96 DGFNKKRLCQFHRYDTGITSL-FH-QEYNTFATG 127 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~~v~~~-~~-~~~~~l~~~ 127 (162)
|.+ ++.+..+......++++ |. ++.+.|+..
T Consensus 211 ~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vT 243 (246)
T PF08450_consen 211 DPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVT 243 (246)
T ss_dssp ETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEE
T ss_pred CCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEE
Confidence 987 88888777665678888 84 565554443
No 318
>KOG2041|consensus
Probab=97.91 E-value=6.3e-05 Score=55.67 Aligned_cols=93 Identities=13% Similarity=0.300 Sum_probs=73.4
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCcc---------------ceeeeeecccceeEE-EcCCCCEEEEecCCCeE
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKK---------------RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYV 133 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~---------------~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i 133 (162)
...+++|+.+..+++.|+.||.+++..+.+.. .-+++.+|...|..+ |+.+.+.|-++..+|.|
T Consensus 16 kL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlI 95 (1189)
T KOG2041|consen 16 KLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLI 95 (1189)
T ss_pred eEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceE
Confidence 48899999999999999999999998776421 123567899999999 99999999999999999
Q ss_pred EEEeCCCceeeeeec--cCCCceeEEEecCC
Q psy1859 134 NIWDGFNKKRLCQFH--RYDTGITSLCFSYD 162 (162)
Q Consensus 134 ~iwd~~~~~~~~~~~--~~~~~v~~v~~~pd 162 (162)
.+|-+-.+.-...+. ...+-|.+++|+-|
T Consensus 96 iVWmlykgsW~EEMiNnRnKSvV~SmsWn~d 126 (1189)
T KOG2041|consen 96 IVWMLYKGSWCEEMINNRNKSVVVSMSWNLD 126 (1189)
T ss_pred EEEeeecccHHHHHhhCcCccEEEEEEEcCC
Confidence 999998775433332 23456778888754
No 319
>KOG3621|consensus
Probab=97.87 E-value=8.3e-05 Score=54.57 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=65.4
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeee-ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee----
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR---- 143 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~---- 143 (162)
.|.--+++..+.+++.|+.-|.+++|+...++....-. +..+.+..+ .+++..+++.|+..|.|.++-+....+
T Consensus 35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~ 114 (726)
T KOG3621|consen 35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLD 114 (726)
T ss_pred eEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcce
Confidence 34444556667899999999999999977654332222 223333344 899999999999999999998865422
Q ss_pred -eeee-ccCCCceeEEEecCC
Q psy1859 144 -LCQF-HRYDTGITSLCFSYD 162 (162)
Q Consensus 144 -~~~~-~~~~~~v~~v~~~pd 162 (162)
+... +.|...|++++|++|
T Consensus 115 ~~t~~d~~~~~rVTal~Ws~~ 135 (726)
T KOG3621|consen 115 YVTPCDKSHKCRVTALEWSKN 135 (726)
T ss_pred eeccccccCCceEEEEEeccc
Confidence 1111 247789999999986
No 320
>KOG1920|consensus
Probab=97.84 E-value=0.001 Score=51.97 Aligned_cols=152 Identities=13% Similarity=0.095 Sum_probs=88.3
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEe--cCCcccc-----------------eeeeeeeeeeecc-------
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYL--DTGPEMQ-----------------KMKYAFKCHRIKE------- 62 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~--~~~~~~~-----------------~~~~~~~~~~~~~------- 62 (162)
.......|.+++|+||.+.++..+..+++.+-+. ++-.... +....+.+.....
T Consensus 105 vg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~ 184 (1265)
T KOG1920|consen 105 VGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIE 184 (1265)
T ss_pred eeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhccccccc
Confidence 3445677899999999999999999888887443 2211000 0111122111100
Q ss_pred -----CcccceeceEEEEecCCCCEEEE-----ecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEec---
Q psy1859 63 -----DGIEKIYPVNAISFHQEYNTFAT-----GGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG--- 128 (162)
Q Consensus 63 -----~~~~~~~~v~~~~~~p~~~~l~~-----~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~--- 128 (162)
.+......=+.|.|--+|.++++ ......+++||.+ |..-..-....+.-.++ |-|.|.++++-.
T Consensus 185 ~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~ 263 (1265)
T KOG1920|consen 185 KEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKT 263 (1265)
T ss_pred ccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecC
Confidence 00011122346999999999887 3333799999987 43322222233344566 999999888864
Q ss_pred CCCeEEEEeCCCceeee----eeccCCCceeEEEecCC
Q psy1859 129 SDGYVNIWDGFNKKRLC----QFHRYDTGITSLCFSYD 162 (162)
Q Consensus 129 ~d~~i~iwd~~~~~~~~----~~~~~~~~v~~v~~~pd 162 (162)
.|+.|.++.- +|-... .+......|..++|+.+
T Consensus 264 sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~ 300 (1265)
T KOG1920|consen 264 SDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSN 300 (1265)
T ss_pred CCCcEEEEec-CCccccccccCCcccccchheeeecCC
Confidence 4567888874 343222 22223334788888753
No 321
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.81 E-value=0.0007 Score=45.76 Aligned_cols=93 Identities=15% Similarity=0.183 Sum_probs=65.4
Q ss_pred ceEEEEecCCC-CEEEEecCCC-eEEEEeCCCccceeeeeeccccee--EE-EcCCCCEEEEecC-----CCeEEEEeCC
Q psy1859 70 PVNAISFHQEY-NTFATGGSDG-YVNIWDGFNKKRLCQFHRYDTGIT--SL-FHQEYNTFATGGS-----DGYVNIWDGF 139 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~-~v~~wd~~~~~~~~~~~~~~~~v~--~~-~~~~~~~l~~~~~-----d~~i~iwd~~ 139 (162)
....++.+|.. ..++.+-.-| ...+||.++++....+....+.-. .- ||+||++|++.-. .|.|-|||..
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 46678889955 5555565554 566899999988877754333221 22 9999999999854 4789999998
Q ss_pred -CceeeeeeccCCCceeEEEecCC
Q psy1859 140 -NKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 140 -~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.+.+..+..|.-....+.+.||
T Consensus 86 ~~~~ri~E~~s~GIGPHel~l~pD 109 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGPHELLLMPD 109 (305)
T ss_pred CCcEEEeEecCCCcChhhEEEcCC
Confidence 55667777766655566666665
No 322
>KOG4190|consensus
Probab=97.80 E-value=8.9e-05 Score=53.41 Aligned_cols=123 Identities=14% Similarity=0.163 Sum_probs=80.5
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEEe-cC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFATG-GS 88 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~-~~ 88 (162)
++.++..+.|-.+-+++++ .||.+.+ ||+-. .+........+.. +.+..+..-|+ ..+++++ +.
T Consensus 783 Hkk~i~~igfL~~lr~i~S--cD~giHl--WDPFi--gr~Laq~~dapk~-------~a~~~ikcl~nv~~~iliAgcsa 849 (1034)
T KOG4190|consen 783 HKKPIHDIGFLADLRSIAS--CDGGIHL--WDPFI--GRLLAQMEDAPKE-------GAGGNIKCLENVDRHILIAGCSA 849 (1034)
T ss_pred ccCcccceeeeeccceeee--ccCccee--ecccc--cchhHhhhcCccc-------CCCceeEecccCcchheeeeccc
Confidence 4556666777777666554 4788999 55433 2222211111111 12333433333 3444444 78
Q ss_pred CCeEEEEeCCCccceeeeeec-----ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRY-----DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~-----~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
..+|+++|.+.+.....++.. ...+.++ ..+.|++++++-..|.|.+.|.++|+.+..+
T Consensus 850 eSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINsw 914 (1034)
T KOG4190|consen 850 ESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSW 914 (1034)
T ss_pred hhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccC
Confidence 899999999998777666532 3456677 9999999999999999999999999876654
No 323
>KOG1912|consensus
Probab=97.79 E-value=8.1e-05 Score=55.47 Aligned_cols=89 Identities=15% Similarity=0.176 Sum_probs=73.6
Q ss_pred eEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCC------------CCEEEEecCCCeEEEEe
Q psy1859 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQE------------YNTFATGGSDGYVNIWD 137 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~------------~~~l~~~~~d~~i~iwd 137 (162)
-.+++|+|.| +|+-|+ ...|.+-|.++.+.++.+..|...|+.+ |.|. .-.+++++..|.|.+||
T Consensus 18 ~~A~Dw~~~G-LiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d 95 (1062)
T KOG1912|consen 18 RNAADWSPSG-LIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVD 95 (1062)
T ss_pred ccccccCccc-eEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEE
Confidence 5688999976 555554 5578899999999999999999999999 8872 12567778889999999
Q ss_pred CCCceeeeeeccCCCceeEEEecC
Q psy1859 138 GFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 138 ~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+..+..+..+..|..++.+++|-|
T Consensus 96 ~~~~s~~~~l~~~~~~~qdl~W~~ 119 (1062)
T KOG1912|consen 96 FVLASVINWLSHSNDSVQDLCWVP 119 (1062)
T ss_pred ehhhhhhhhhcCCCcchhheeeee
Confidence 999888888888889999999865
No 324
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.79 E-value=0.0017 Score=37.18 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=63.9
Q ss_pred EEEEEEee---C-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 16 TRCIKCFP---N-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 16 ~~~i~~~~---~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
++++++.. + .+.|++|+.|..|++ |+... .+..+.... .|+++.-... ..|+.+..+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRv--f~~~e----~~~Ei~e~~----------~v~~L~~~~~-~~F~Y~l~NGT 64 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRV--FKGDE----IVAEITETD----------KVTSLCSLGG-GRFAYALANGT 64 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEE--EeCCc----EEEEEeccc----------ceEEEEEcCC-CEEEEEecCCE
Confidence 56777654 2 257999999999999 54422 333333222 5777766654 67999999999
Q ss_pred EEEEeCCCccceeeeeecccceeEE--EcCCC--C-EEEEecCCCeEE
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL--FHQEY--N-TFATGGSDGYVN 134 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~--~~~~~--~-~l~~~~~d~~i~ 134 (162)
|-+|+-. ..+.+.+. +..+.++ +..++ . -|++|-.+|.|-
T Consensus 65 VGvY~~~--~RlWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 65 VGVYDRS--QRLWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred EEEEeCc--ceeeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 9999863 33444443 3335555 44443 2 688888888764
No 325
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.77 E-value=0.00074 Score=47.48 Aligned_cols=109 Identities=15% Similarity=0.141 Sum_probs=68.5
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCcccee
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~ 104 (162)
+..+++++.+|.+.. +|..+ .+........ ...... ..+..++.++.+|.+..+|..+++.+.
T Consensus 241 ~~~vy~~~~~g~l~a--~d~~t--G~~~W~~~~~-----------~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W 303 (377)
T TIGR03300 241 GGQVYAVSYQGRVAA--LDLRS--GRVLWKRDAS-----------SYQGPA--VDDNRLYVTDADGVVVALDRRSGSELW 303 (377)
T ss_pred CCEEEEEEcCCEEEE--EECCC--CcEEEeeccC-----------CccCce--EeCCEEEEECCCCeEEEEECCCCcEEE
Confidence 345666677787777 55544 3333332211 111111 235677778889999999999987765
Q ss_pred eeeecccc-eeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC
Q psy1859 105 QFHRYDTG-ITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD 151 (162)
Q Consensus 105 ~~~~~~~~-v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 151 (162)
........ .... ...+..+++++.+|.|.++|..+++.+.++..+.
T Consensus 304 ~~~~~~~~~~ssp-~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~ 350 (377)
T TIGR03300 304 KNDELKYRQLTAP-AVVGGYLVVGDFEGYLHWLSREDGSFVARLKTDG 350 (377)
T ss_pred ccccccCCccccC-EEECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC
Confidence 54321111 1111 1146789999999999999999999888776544
No 326
>KOG0882|consensus
Probab=97.76 E-value=0.00027 Score=49.61 Aligned_cols=106 Identities=21% Similarity=0.195 Sum_probs=76.7
Q ss_pred cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCC------ccc---
Q psy1859 32 SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFN------KKR--- 102 (162)
Q Consensus 32 ~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~------~~~--- 102 (162)
-.++.+.+ +|......+..+.-+. |..+|..+.++|-+..+++....|.|.-|.... .+.
T Consensus 119 ~~sg~i~V--vD~~~d~~q~~~fkkl---------H~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~ 187 (558)
T KOG0882|consen 119 FKSGKIFV--VDGFGDFCQDGYFKKL---------HFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFE 187 (558)
T ss_pred ccCCCcEE--ECCcCCcCccceeccc---------ccCceEEEEeeccccceeeccccceeEeecCCCcccCcccccccc
Confidence 34467777 6654322333333233 444899999999999999999999999998873 111
Q ss_pred ------eeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 103 ------LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 103 ------~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
+..+........++ |+|+|..+.+-+.|..|+++++++++.++.+.
T Consensus 188 ~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 188 LKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID 240 (558)
T ss_pred ccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence 11223345667788 99999999999999999999999998777663
No 327
>KOG4499|consensus
Probab=97.76 E-value=0.0022 Score=41.69 Aligned_cols=90 Identities=18% Similarity=0.231 Sum_probs=63.5
Q ss_pred eEEEEecCCCCEEE-EecCCCeEEEEe--CCCcc-----ceeeeeec---cc-ceeEE-EcCCCCEEEEecCCCeEEEEe
Q psy1859 71 VNAISFHQEYNTFA-TGGSDGYVNIWD--GFNKK-----RLCQFHRY---DT-GITSL-FHQEYNTFATGGSDGYVNIWD 137 (162)
Q Consensus 71 v~~~~~~p~~~~l~-~~~~d~~v~~wd--~~~~~-----~~~~~~~~---~~-~v~~~-~~~~~~~l~~~~~d~~i~iwd 137 (162)
-..++|+.+.+.+. +-+.+-.|.-|| ..+|. .+..++.. .. ..-.+ +..+|.+.++.-..++|...|
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~d 239 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVD 239 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEEC
Confidence 45799998875544 556778887777 44442 23333321 11 11122 556788888888889999999
Q ss_pred CCCceeeeeeccCCCceeEEEec
Q psy1859 138 GFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 138 ~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
..+|+.+..+......|++++|-
T Consensus 240 p~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 240 PTTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred CCCCcEEEEEEcCCCceEEEEec
Confidence 99999999998888899999984
No 328
>KOG2444|consensus
Probab=97.73 E-value=0.00019 Score=46.01 Aligned_cols=104 Identities=10% Similarity=0.052 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEE-EecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAI-SFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
+..+++|+.+|.+.+|.|+........... +.. .+.++ .--.++.+.+++..+|.|+.|++...+.+
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s--~~e----------~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~ 137 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCS--GEE----------SIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVL 137 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhc--ccc----------cceeccccccccceeEEeccCCceeeeccccCcee
Confidence 466899999999999888754321111111 111 22222 22223458889999999999999877766
Q ss_pred eeeeecc-cceeEE-EcCCCCEEEEe--cCCCeEEEEeCCC
Q psy1859 104 CQFHRYD-TGITSL-FHQEYNTFATG--GSDGYVNIWDGFN 140 (162)
Q Consensus 104 ~~~~~~~-~~v~~~-~~~~~~~l~~~--~~d~~i~iwd~~~ 140 (162)
.....|. .+.... .+..++++..+ +.|..++.|++..
T Consensus 138 g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 138 GYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred eeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 5555554 333333 44455566665 6666777777653
No 329
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.73 E-value=0.00094 Score=47.90 Aligned_cols=79 Identities=16% Similarity=0.168 Sum_probs=46.4
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc-----------eeeeee
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK-----------KRLCQF 147 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~-----------~~~~~~ 147 (162)
|.+|+..+.+ .|.+||..+++.++++... .+..+ |+++|.+++..+.+ .+.|++.... .....+
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~ 192 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELI 192 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEE
Confidence 7777766554 8999999999999888643 37888 99999999999766 6777765322 023333
Q ss_pred ccCCCceeEEEecCC
Q psy1859 148 HRYDTGITSLCFSYD 162 (162)
Q Consensus 148 ~~~~~~v~~v~~~pd 162 (162)
..-...|.+.+|..|
T Consensus 193 ~E~~~~IkSg~W~~d 207 (443)
T PF04053_consen 193 HEISERIKSGCWVED 207 (443)
T ss_dssp EEE-S--SEEEEETT
T ss_pred EEecceeEEEEEEcC
Confidence 222446777777543
No 330
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.72 E-value=0.0012 Score=43.16 Aligned_cols=112 Identities=19% Similarity=0.174 Sum_probs=70.7
Q ss_pred eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccc
Q psy1859 23 PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKR 102 (162)
Q Consensus 23 ~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~ 102 (162)
+++..+++++.++.+.. +|..+ .+....+..... +.... ...+..++.++.++.+..+|..+|+.
T Consensus 34 ~~~~~v~~~~~~~~l~~--~d~~t--G~~~W~~~~~~~----------~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~ 98 (238)
T PF13360_consen 34 PDGGRVYVASGDGNLYA--LDAKT--GKVLWRFDLPGP----------ISGAP-VVDGGRVYVGTSDGSLYALDAKTGKV 98 (238)
T ss_dssp EETTEEEEEETTSEEEE--EETTT--SEEEEEEECSSC----------GGSGE-EEETTEEEEEETTSEEEEEETTTSCE
T ss_pred EeCCEEEEEcCCCEEEE--EECCC--CCEEEEeecccc----------cccee-eecccccccccceeeeEecccCCcce
Confidence 35666777788888888 66655 444444333211 00101 12245566666788999999999988
Q ss_pred eeee-eecccc--e-eEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 103 LCQF-HRYDTG--I-TSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 103 ~~~~-~~~~~~--v-~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
+... ...... . ... ...++..++.+..++.|..+|+++|+.+.....
T Consensus 99 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~ 150 (238)
T PF13360_consen 99 LWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPV 150 (238)
T ss_dssp EEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEES
T ss_pred eeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeec
Confidence 8774 322111 1 111 333478888888899999999999998877754
No 331
>KOG1275|consensus
Probab=97.69 E-value=0.00023 Score=54.03 Aligned_cols=74 Identities=19% Similarity=0.251 Sum_probs=59.2
Q ss_pred eEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEEEcCCCCEEEEecC---------CCeEEEEeCCCc
Q psy1859 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGS---------DGYVNIWDGFNK 141 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~ 141 (162)
|.-|. .+++.+.+|...|.|.+-|.++-+.+.++.+|.+.+.++ +-.|++|++++. |.-|+|||+|..
T Consensus 180 v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf-Dv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmm 256 (1118)
T KOG1275|consen 180 VTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF-DVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMM 256 (1118)
T ss_pred eEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccceeee-eccCCeEEEeecccccccccccchhhhhhhhhh
Confidence 44444 346889999999999999999999999999999988775 556889999874 557899999976
Q ss_pred eeeeee
Q psy1859 142 KRLCQF 147 (162)
Q Consensus 142 ~~~~~~ 147 (162)
+.+..+
T Consensus 257 ral~PI 262 (1118)
T KOG1275|consen 257 RALSPI 262 (1118)
T ss_pred hccCCc
Confidence 654433
No 332
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.66 E-value=0.0022 Score=45.17 Aligned_cols=108 Identities=15% Similarity=0.141 Sum_probs=68.4
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
.+..+++++.+|.+.. +|..+ .+.+........ ....... ++..++.++.++.+..+|..+|+.+
T Consensus 64 ~~~~v~v~~~~g~v~a--~d~~t--G~~~W~~~~~~~---------~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~ 128 (377)
T TIGR03300 64 AGGKVYAADADGTVVA--LDAET--GKRLWRVDLDER---------LSGGVGA--DGGLVFVGTEKGEVIALDAEDGKEL 128 (377)
T ss_pred ECCEEEEECCCCeEEE--EEccC--CcEeeeecCCCC---------cccceEE--cCCEEEEEcCCCEEEEEECCCCcEe
Confidence 3567778888887766 66555 344443222211 0111222 3567778888999999999999887
Q ss_pred eeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 104 CQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 104 ~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
...... ..+.+. .- .+..++.+..++.|..+|.++|+.+..+.
T Consensus 129 W~~~~~-~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 172 (377)
T TIGR03300 129 WRAKLS-SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYS 172 (377)
T ss_pred eeeccC-ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEc
Confidence 665432 222222 11 34567778889999999999998766654
No 333
>KOG1920|consensus
Probab=97.66 E-value=0.0039 Score=49.00 Aligned_cols=68 Identities=7% Similarity=0.051 Sum_probs=50.0
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
+.|.++.|.-+.+.++.+...|.|.+ .|+.+ ... ..-+... ..|.+++|+|++..++..+...++.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iil--vd~et--~~~--eivg~vd--------~GI~aaswS~Dee~l~liT~~~tll 134 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIIL--VDPET--LEL--EIVGNVD--------NGISAASWSPDEELLALITGRQTLL 134 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEE--Ecccc--cce--eeeeecc--------CceEEEeecCCCcEEEEEeCCcEEE
Confidence 56777888888888999999999998 56654 222 2222222 2699999999999999888877776
Q ss_pred EE
Q psy1859 94 IW 95 (162)
Q Consensus 94 ~w 95 (162)
+-
T Consensus 135 ~m 136 (1265)
T KOG1920|consen 135 FM 136 (1265)
T ss_pred EE
Confidence 54
No 334
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.66 E-value=0.00028 Score=33.91 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=29.9
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEec
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLD 43 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~ 43 (162)
+..+...+.+++|+|....++.++.+|.|.++.++
T Consensus 7 ~k~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 7 EKNLPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 34556678999999999999999999999997664
No 335
>KOG1008|consensus
Probab=97.65 E-value=9.4e-06 Score=58.86 Aligned_cols=139 Identities=13% Similarity=0.158 Sum_probs=82.8
Q ss_pred ccccEEEEEEee-CCCeEEEE----cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 12 LKFQTRCIKCFP-NKQGYVLS----SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 12 ~~~~~~~i~~~~-~~~~l~~~----~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
+..+.++++|++ |.+.|++| -.|..+.||+....-..++....+.... .....++.|-.+.+++++|
T Consensus 101 ~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~--------l~gqns~cwlrd~klvlaG 172 (783)
T KOG1008|consen 101 YARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSST--------LDGQNSVCWLRDTKLVLAG 172 (783)
T ss_pred ccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcccccccccc--------ccCccccccccCcchhhcc
Confidence 344557789998 56667776 3345788977654310122222222211 1145688888778999999
Q ss_pred cCCCeEEEEeCCCcc-ceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEe-CCCce-eeeeeccCC----CceeEE
Q psy1859 87 GSDGYVNIWDGFNKK-RLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWD-GFNKK-RLCQFHRYD----TGITSL 157 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~-~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd-~~~~~-~~~~~~~~~----~~v~~v 157 (162)
.....+.++|++... ....+ ....+..+ .+| .+.|++.-. |+.|-+|| .++-+ ++..+...+ ..+..+
T Consensus 173 m~sr~~~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~ 249 (783)
T KOG1008|consen 173 MTSRSVHIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFAL 249 (783)
T ss_pred cccchhhhhhhhhhhhhhhhh--hhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeE
Confidence 999999999998431 12222 23344445 566 566777765 99999999 43322 233332112 247888
Q ss_pred EecC
Q psy1859 158 CFSY 161 (162)
Q Consensus 158 ~~~p 161 (162)
+|+|
T Consensus 250 aycP 253 (783)
T KOG1008|consen 250 AYCP 253 (783)
T ss_pred Eecc
Confidence 8887
No 336
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.64 E-value=0.0097 Score=42.25 Aligned_cols=124 Identities=14% Similarity=0.113 Sum_probs=74.7
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccc-ee---eeeee---------------e-eeecc----------Cc
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQ-KM---KYAFK---------------C-HRIKE----------DG 64 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~-~~---~~~~~---------------~-~~~~~----------~~ 64 (162)
.|..+++.++...|+++...|.|.||.|..++... +. ...++ . ++... --
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 47889999998999999999999999997653221 00 00000 0 00000 00
Q ss_pred ccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeee--e------cccceeEE-EcC-----CC---CEEEEe
Q psy1859 65 IEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH--R------YDTGITSL-FHQ-----EY---NTFATG 127 (162)
Q Consensus 65 ~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~--~------~~~~v~~~-~~~-----~~---~~l~~~ 127 (162)
....++|++++.|. =-+++.|..+|.+.+.|+|....+..-. . ....++++ |.- |+ -.+++|
T Consensus 83 ~~~~g~vtal~~S~-iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNSD-IGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE-B-TSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecCC-CcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 11245889999874 4588999999999999998776555421 1 22356666 552 33 378888
Q ss_pred cCCCeEEEEeCC
Q psy1859 128 GSDGYVNIWDGF 139 (162)
Q Consensus 128 ~~d~~i~iwd~~ 139 (162)
...|.+.+|.+.
T Consensus 162 Tn~G~v~~fkIl 173 (395)
T PF08596_consen 162 TNSGNVLTFKIL 173 (395)
T ss_dssp ETTSEEEEEEEE
T ss_pred eCCCCEEEEEEe
Confidence 999999999874
No 337
>KOG2114|consensus
Probab=97.63 E-value=0.0071 Score=46.04 Aligned_cols=129 Identities=10% Similarity=0.078 Sum_probs=81.5
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
..++.+++.+.+-+.+++|-.+|.|..+.=|... .+....--.|+.. ++|+++++..++..++-......|
T Consensus 125 ~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~R--Drgsr~~~~~~~~-------~pITgL~~~~d~~s~lFv~Tt~~V 195 (933)
T KOG2114|consen 125 PSPASSLAVSEDLKTIVCGFTNGLVICYKGDILR--DRGSRQDYSHRGK-------EPITGLALRSDGKSVLFVATTEQV 195 (933)
T ss_pred CCcceEEEEEccccEEEEEecCcEEEEEcCcchh--ccccceeeeccCC-------CCceeeEEecCCceeEEEEeccee
Confidence 4556789999988889999999999986545432 1111111113322 389999998888653333345678
Q ss_pred EEEeCCCccc-eeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec-cCC
Q psy1859 93 NIWDGFNKKR-LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYD 151 (162)
Q Consensus 93 ~~wd~~~~~~-~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~ 151 (162)
.+|.+....+ ...+..++....|- +++....++.+ .+..+.+|+....+.-..+. +|.
T Consensus 196 ~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca-~~e~l~fY~sd~~~~cfaf~~g~k 256 (933)
T KOG2114|consen 196 MLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICA-GSEFLYFYDSDGRGPCFAFEVGEK 256 (933)
T ss_pred EEEEecCCCcceeeeccCCccceeeecCCCCccEEEe-cCceEEEEcCCCcceeeeecCCCe
Confidence 8998884442 44567777777777 77644434444 34478999886544444444 443
No 338
>KOG1645|consensus
Probab=97.63 E-value=0.00021 Score=49.38 Aligned_cols=74 Identities=12% Similarity=0.135 Sum_probs=57.0
Q ss_pred cccEEEEEEeeCCC-eEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCC
Q psy1859 13 KFQTRCIKCFPNKQ-GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDG 90 (162)
Q Consensus 13 ~~~~~~i~~~~~~~-~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~ 90 (162)
...|+.++++|..+ .+..++.+..|+| +|..+ ...+..+..+. ++.+++|.-+. +.+..|..+|
T Consensus 193 g~~IrdlafSp~~~GLl~~asl~nkiki--~dlet--~~~vssy~a~~----------~~wSC~wDlde~h~IYaGl~nG 258 (463)
T KOG1645|consen 193 GSFIRDLAFSPFNEGLLGLASLGNKIKI--MDLET--SCVVSSYIAYN----------QIWSCCWDLDERHVIYAGLQNG 258 (463)
T ss_pred chhhhhhccCccccceeeeeccCceEEE--Eeccc--ceeeeheeccC----------CceeeeeccCCcceeEEeccCc
Confidence 34567799999876 6778899999999 55544 44444444443 69999998887 7788889999
Q ss_pred eEEEEeCCCc
Q psy1859 91 YVNIWDGFNK 100 (162)
Q Consensus 91 ~v~~wd~~~~ 100 (162)
.|.+||++..
T Consensus 259 ~VlvyD~R~~ 268 (463)
T KOG1645|consen 259 MVLVYDMRQP 268 (463)
T ss_pred eEEEEEccCC
Confidence 9999999964
No 339
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.56 E-value=0.0054 Score=45.79 Aligned_cols=130 Identities=10% Similarity=-0.065 Sum_probs=73.2
Q ss_pred cEEEEEEeeCCCeEEEEc------CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 15 QTRCIKCFPNKQGYVLSS------IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~------~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.+...+++|+|+.++... .+..-.||..+.... .... . .+. ....-.|+|+|..+.+...
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~-~~~l-t-~g~-----------~~t~PsWspDG~~lw~v~d 416 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV-AVQV-L-EGH-----------SLTRPSWSLDADAVWVVVD 416 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc-ceee-e-cCC-----------CCCCceECCCCCceEEEec
Confidence 346778999999887664 345557776664321 1111 1 111 2677889999876665542
Q ss_pred C------------CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEE---EeCCCcee-e---eeec
Q psy1859 89 D------------GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNI---WDGFNKKR-L---CQFH 148 (162)
Q Consensus 89 d------------~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~i---wd~~~~~~-~---~~~~ 148 (162)
. +.+.+.++..+.... .....|..+ |||||..++... ++.|.+ -....|.. + ..+.
T Consensus 417 g~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~ 492 (591)
T PRK13616 417 GNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVG 492 (591)
T ss_pred CcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEee
Confidence 2 334333444333222 234569999 999999887765 467776 33333431 1 1121
Q ss_pred -cCCCceeEEEecCC
Q psy1859 149 -RYDTGITSLCFSYD 162 (162)
Q Consensus 149 -~~~~~v~~v~~~pd 162 (162)
.-...+.++.|.+|
T Consensus 493 ~~l~~~~~~l~W~~~ 507 (591)
T PRK13616 493 PGLGDTAVSLDWRTG 507 (591)
T ss_pred cccCCccccceEecC
Confidence 22233577777654
No 340
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.56 E-value=0.0063 Score=45.23 Aligned_cols=53 Identities=13% Similarity=0.032 Sum_probs=37.4
Q ss_pred CCeEEEEeCCC----c-cceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEEeCCCce
Q psy1859 89 DGYVNIWDGFN----K-KRLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDGFNKK 142 (162)
Q Consensus 89 d~~v~~wd~~~----~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~~~~ 142 (162)
++.|.+.|.++ + +.+..+. -......+ ++|||+++++++ .++++.|.|+.+.+
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 35577788776 2 3333333 34566778 999999887776 58899999998644
No 341
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.53 E-value=0.0034 Score=46.52 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=51.1
Q ss_pred ceEEEEecCCCCEEEEe-cCCCeEEEEeCCCccc------------eeeeeecccceeEE-EcCCCCEEEEecCCCeEEE
Q psy1859 70 PVNAISFHQEYNTFATG-GSDGYVNIWDGFNKKR------------LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNI 135 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~-~~d~~v~~wd~~~~~~------------~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~i 135 (162)
....++++|+|++++++ ..+..+.+.|+.+.+. ..+..- ....... |+++|....+.--|.+|-.
T Consensus 322 sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~k 400 (635)
T PRK02888 322 NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVK 400 (635)
T ss_pred CccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEE
Confidence 46789999999766654 5689999999987543 222222 2233344 9999987777788999999
Q ss_pred EeCCC
Q psy1859 136 WDGFN 140 (162)
Q Consensus 136 wd~~~ 140 (162)
||+.+
T Consensus 401 wn~~~ 405 (635)
T PRK02888 401 WNIEA 405 (635)
T ss_pred EehHH
Confidence 99875
No 342
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.53 E-value=0.01 Score=40.62 Aligned_cols=90 Identities=14% Similarity=0.084 Sum_probs=59.1
Q ss_pred ceEEEEecCCCCEEEEe-cCCCeEEEEeCCC--cc---c--eeeeeecccceeEE-EcCCCCEEEEecCCC-eEEEEeCC
Q psy1859 70 PVNAISFHQEYNTFATG-GSDGYVNIWDGFN--KK---R--LCQFHRYDTGITSL-FHQEYNTFATGGSDG-YVNIWDGF 139 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~-~~d~~v~~wd~~~--~~---~--~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~-~i~iwd~~ 139 (162)
.-++|+|||+++.|... +..+.|.-|++.. +. . ...+....+..-.+ ...+|.+.+.+..+| .|..|+..
T Consensus 164 ~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd 243 (307)
T COG3386 164 IPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD 243 (307)
T ss_pred ecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC
Confidence 46789999999666555 5568888887762 21 1 11111122333344 667888775554544 89999997
Q ss_pred CceeeeeeccCCCceeEEEec
Q psy1859 140 NKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 140 ~~~~~~~~~~~~~~v~~v~~~ 160 (162)
++.+..+..+...+++++|-
T Consensus 244 -G~l~~~i~lP~~~~t~~~Fg 263 (307)
T COG3386 244 -GKLLGEIKLPVKRPTNPAFG 263 (307)
T ss_pred -CcEEEEEECCCCCCccceEe
Confidence 88888887766678888874
No 343
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.52 E-value=0.0039 Score=47.71 Aligned_cols=67 Identities=12% Similarity=0.213 Sum_probs=50.8
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
...|++-+.+| .||+|+.+|.|++||--..+....+++-+.+|..+ .+.||+++++.+.. .|.+++.
T Consensus 579 ~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t-yLlLi~t 646 (794)
T PF08553_consen 579 NFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKT-YLLLIDT 646 (794)
T ss_pred CceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc-eEEEEEE
Confidence 47788777666 78899999999999954333344566778999999 99999998887655 5555554
No 344
>KOG2079|consensus
Probab=97.51 E-value=0.00029 Score=54.26 Aligned_cols=78 Identities=27% Similarity=0.313 Sum_probs=60.6
Q ss_pred CCEEEEecCCCeEEEEeCCCc-cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEE
Q psy1859 80 YNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL 157 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v 157 (162)
+-.++.|+..|.+...|.... .+...-....++|+++ |+.+|..++.|-.+|.|.+||+..++.++.+..|..+.+++
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v 178 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV 178 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence 456888999999998887753 2222223346789999 99999999999999999999999988888877666555544
No 345
>KOG3617|consensus
Probab=97.48 E-value=0.00096 Score=50.72 Aligned_cols=73 Identities=12% Similarity=0.143 Sum_probs=54.3
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
+.|+.+++|+|..-.|+.|-.-|.+.+|.-+..+ ..+... .|..++..+.|||+|..++++..-|.+
T Consensus 59 P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e-----~htv~~--------th~a~i~~l~wS~~G~~l~t~d~~g~v 125 (1416)
T KOG3617|consen 59 PVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE-----THTVVE--------THPAPIQGLDWSHDGTVLMTLDNPGSV 125 (1416)
T ss_pred ceehhhhccChHHHHHhhccccceeEEEecCCce-----eeeecc--------CCCCCceeEEecCCCCeEEEcCCCcee
Confidence 4566779999987777887777889985433211 111111 155689999999999999999999999
Q ss_pred EEEeCC
Q psy1859 93 NIWDGF 98 (162)
Q Consensus 93 ~~wd~~ 98 (162)
.+|...
T Consensus 126 ~lwr~d 131 (1416)
T KOG3617|consen 126 HLWRYD 131 (1416)
T ss_pred EEEEee
Confidence 999776
No 346
>KOG0882|consensus
Probab=97.43 E-value=0.0041 Score=43.99 Aligned_cols=134 Identities=11% Similarity=-0.021 Sum_probs=87.4
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCC--cccceeeeeeeeeeeccC-cccceeceEEEEecCCCCEEEEecC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTG--PEMQKMKYAFKCHRIKED-GIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
+-.++.++.+++.+..+++....|-|.-|.-+.. .......+.++. ..... -.+......++.|+|++..+.+-+.
T Consensus 143 H~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~-eTdLy~f~K~Kt~pts~Efsp~g~qistl~~ 221 (558)
T KOG0882|consen 143 HFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKH-ETDLYGFPKAKTEPTSFEFSPDGAQISTLNP 221 (558)
T ss_pred ccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccc-cchhhcccccccCccceEEccccCcccccCc
Confidence 3356778889998888888888899998654420 000111111111 10000 0112224679999999999999999
Q ss_pred CCeEEEEeCCCccceeeeee--------------------------------ccc-ceeEE-EcCCCCEEEEecCCCeEE
Q psy1859 89 DGYVNIWDGFNKKRLCQFHR--------------------------------YDT-GITSL-FHQEYNTFATGGSDGYVN 134 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~--------------------------------~~~-~v~~~-~~~~~~~l~~~~~d~~i~ 134 (162)
|..|+++++++++.++.+.. +.. .-+.+ |...|++|+.++--| |+
T Consensus 222 DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ik 300 (558)
T KOG0882|consen 222 DRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IK 300 (558)
T ss_pred ccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EE
Confidence 99999999998876554421 111 12334 888899999987654 88
Q ss_pred EEeCCCceeeeee
Q psy1859 135 IWDGFNKKRLCQF 147 (162)
Q Consensus 135 iwd~~~~~~~~~~ 147 (162)
+.++.++..++.+
T Consensus 301 vin~~tn~v~ri~ 313 (558)
T KOG0882|consen 301 VINLDTNTVVRIL 313 (558)
T ss_pred EEEeecCeEEEEe
Confidence 9999988877665
No 347
>KOG2114|consensus
Probab=97.42 E-value=0.019 Score=43.85 Aligned_cols=133 Identities=16% Similarity=0.124 Sum_probs=80.3
Q ss_pred CeEEEEcCCC-----cEEEEEecCCccc--ceeeeeeeeeeeccCcc-cceeceEEEEecCCCCEEEEecCCCeEEEEeC
Q psy1859 26 QGYVLSSIEG-----RAAVEYLDTGPEM--QKMKYAFKCHRIKEDGI-EKIYPVNAISFHQEYNTFATGGSDGYVNIWDG 97 (162)
Q Consensus 26 ~~l~~~~~~g-----~i~i~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~ 97 (162)
.+|++.+.|+ .++||+++...+. +..... |+...... ..+.++.+++.+.+-+.++.|-.+|.|..+.-
T Consensus 78 ~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~---~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~G 154 (933)
T KOG2114|consen 78 NFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYE---HRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKG 154 (933)
T ss_pred eEEEEEeecCCCCceEEEEecccccCCCCCcceeee---eeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcC
Confidence 4555554443 5788877654321 222211 21111001 13457899999998899999999999998854
Q ss_pred CC----ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee-eeeeccCCCceeEEEecC
Q psy1859 98 FN----KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR-LCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 98 ~~----~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~v~~~p 161 (162)
.- +....-....+.+|+.+ +..+++.++....-..|.+|.+....+ ..++..|...+.|.+|++
T Consensus 155 Di~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~ 224 (933)
T KOG2114|consen 155 DILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSD 224 (933)
T ss_pred cchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCC
Confidence 31 22222223456789999 777777633333344789999864332 444667777788877765
No 348
>KOG3630|consensus
Probab=97.38 E-value=0.002 Score=50.34 Aligned_cols=143 Identities=13% Similarity=0.062 Sum_probs=82.6
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCccccee---eeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecC
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKM---KYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGS 88 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~ 88 (162)
+..+..+.+++|+...++........|+.||..+-.... ...+..+.. .........++.|+|.- ...+.+..
T Consensus 100 ~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~t---s~ek~vf~~~~~wnP~vp~n~av~l~ 176 (1405)
T KOG3630|consen 100 EIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSAT---SFEKPVFQLKNVWNPLVPLNSAVDLS 176 (1405)
T ss_pred cccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccc---hhccccccccccccCCccchhhhhcc
Confidence 344555667788766555433323333335543211111 111122211 11122256788999976 45677788
Q ss_pred CCeEEEEeCCCccc-eeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc----CCCceeEEEec
Q psy1859 89 DGYVNIWDGFNKKR-LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR----YDTGITSLCFS 160 (162)
Q Consensus 89 d~~v~~wd~~~~~~-~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~v~~~ 160 (162)
|+.|++..+..-.. +..+ ......+++ |+|.|+.++.|...|++.-|... ++....+.. ....|.+|+|-
T Consensus 177 dlsl~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl 252 (1405)
T KOG3630|consen 177 DLSLRVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWL 252 (1405)
T ss_pred ccchhhhhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEe
Confidence 99998887764322 2232 245667788 99999999999999999988763 333333321 13578888884
No 349
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.22 E-value=0.0078 Score=46.14 Aligned_cols=112 Identities=16% Similarity=0.157 Sum_probs=66.2
Q ss_pred EEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC-------CCEEEEecCCCeEEEEeCCCcc--ceee-ee
Q psy1859 38 AVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE-------YNTFATGGSDGYVNIWDGFNKK--RLCQ-FH 107 (162)
Q Consensus 38 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-------~~~l~~~~~d~~v~~wd~~~~~--~~~~-~~ 107 (162)
.|+.+|... .+.+-..+.+... +|..+ .|+ ...-..|-.+..+..||.|-.. .+.. ..
T Consensus 505 ~ly~mDLe~--GKVV~eW~~~~~~--------~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k 572 (794)
T PF08553_consen 505 KLYKMDLER--GKVVEEWKVHDDI--------PVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK 572 (794)
T ss_pred ceEEEecCC--CcEEEEeecCCCc--------ceeEe--cccccccccCCCceEEEECCCceEEeccCCCCCceeecccc
Confidence 456677766 4455444444321 24443 342 2345567778889999998632 2211 11
Q ss_pred --ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 108 --RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 108 --~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.......|+ -+.+ .++|+|+.+|.||+||-...+.-..+.+-..+|.+|..+.|
T Consensus 573 ~Y~~~~~Fs~~aTt~~-G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~D 629 (794)
T PF08553_consen 573 QYSSKNNFSCFATTED-GYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTAD 629 (794)
T ss_pred ccccCCCceEEEecCC-ceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCC
Confidence 123334454 4444 48999999999999995332323334566789999888765
No 350
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.18 E-value=0.028 Score=36.76 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=64.3
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc-Ccccceece-EEEEecCCCCEEEEecCCCe-EEEEeCCCc
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE-DGIEKIYPV-NAISFHQEYNTFATGGSDGY-VNIWDGFNK 100 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v-~~~~~~p~~~~l~~~~~d~~-v~~wd~~~~ 100 (162)
.+..++++..++.+.. +|..+ .+.+.......... ........+ ..+.+. ++ .+..++.++. +.+ |+.++
T Consensus 121 ~~~~~~~~~~~g~l~~--~d~~t--G~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~~~~~-d~~tg 193 (238)
T PF13360_consen 121 DGDRLYVGTSSGKLVA--LDPKT--GKLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG-RVYVSSGDGRVVAV-DLATG 193 (238)
T ss_dssp ETTEEEEEETCSEEEE--EETTT--TEEEEEEESSTT-SS--EEEETTEEEEEECC-TT-EEEEECCTSSEEEE-ETTTT
T ss_pred ecCEEEEEeccCcEEE--EecCC--CcEEEEeecCCCCCCcceeeecccccceEEE-CC-EEEEEcCCCeEEEE-ECCCC
Confidence 3677778777888877 66655 34444333311100 000000011 223333 34 6666666664 555 99998
Q ss_pred cceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeee
Q psy1859 101 KRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 101 ~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 146 (162)
+.+.... ......+...++..++.++.++.|..||+++++.+.+
T Consensus 194 ~~~w~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 194 EKLWSKP--ISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp EEEEEEC--SS-ECECEECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred CEEEEec--CCCccCCceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence 8554222 2222221345777888887999999999999987654
No 351
>KOG1832|consensus
Probab=97.18 E-value=0.00068 Score=51.76 Aligned_cols=74 Identities=18% Similarity=0.214 Sum_probs=63.7
Q ss_pred ceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCC--eEEEEeCCC
Q psy1859 67 KIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG--YVNIWDGFN 140 (162)
Q Consensus 67 ~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~--~i~iwd~~~ 140 (162)
|....++++|+-+.+.|+.|+..|.|+++++.+|.......+|...++.+ =+.+|..+.+.+.-. ...+|++..
T Consensus 1100 ~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s 1176 (1516)
T KOG1832|consen 1100 ETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS 1176 (1516)
T ss_pred cccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccc
Confidence 44579999999999999999999999999999999999999999999999 777898887776443 467898853
No 352
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.16 E-value=0.045 Score=38.84 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=74.9
Q ss_pred EEEEEeeCCCeE-EEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC---CCeE
Q psy1859 17 RCIKCFPNKQGY-VLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS---DGYV 92 (162)
Q Consensus 17 ~~i~~~~~~~~l-~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~---d~~v 92 (162)
..++.++.++.+ +....+..+.+ +|... .+.......-. ....++++|+++.+..+.. ++.+
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~v--id~~~--~~~~~~~~vG~----------~P~~~~~~~~~~~vYV~n~~~~~~~v 142 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSV--IDTAT--NTVLGSIPVGL----------GPVGLAVDPDGKYVYVANAGNGNNTV 142 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEE--EcCcc--cceeeEeeecc----------CCceEEECCCCCEEEEEecccCCceE
Confidence 456777777644 44455577888 55433 22222222111 3678999999965555443 7899
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEEeCCCceee
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDGFNKKRL 144 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~~~~~~ 144 (162)
.+.|..+.+.+........+ ..+ ++|+|..++... .++.|.+.|.......
T Consensus 143 svid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~ 195 (381)
T COG3391 143 SVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV 195 (381)
T ss_pred EEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence 99999888887775543334 667 999999776665 7889999997665444
No 353
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.14 E-value=0.0045 Score=43.30 Aligned_cols=55 Identities=11% Similarity=-0.038 Sum_probs=39.2
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeee
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLC 145 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 145 (162)
.+.+.++|+.+++....... ...+... |+|+|+.++... ++.|.+++..++...+
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQ 77 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEE
T ss_pred ceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEE
Confidence 46788999998654433322 5567777 999999999884 5789999987775443
No 354
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.13 E-value=0.014 Score=41.68 Aligned_cols=80 Identities=14% Similarity=0.108 Sum_probs=58.5
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeE-E--EcCCC----------------C-EEEEecC
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS-L--FHQEY----------------N-TFATGGS 129 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~-~--~~~~~----------------~-~l~~~~~ 129 (162)
.+.++..+|.+++.++...-|.|.++|+..+..++.+++....-.. + ..+.. . +++.+-.
T Consensus 309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyapr 388 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPR 388 (415)
T ss_pred eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEecc
Confidence 5778999999998888877899999999999888877765432211 1 11111 1 3455667
Q ss_pred CCeEEEEeCCCceeeeeecc
Q psy1859 130 DGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 130 d~~i~iwd~~~~~~~~~~~~ 149 (162)
-|.|-||.+++|..+..+..
T Consensus 389 Rg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 389 RGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred CCeEEEEecCCCCEEEEEEe
Confidence 89999999999988777653
No 355
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.11 E-value=0.062 Score=39.74 Aligned_cols=123 Identities=10% Similarity=0.046 Sum_probs=74.0
Q ss_pred ccEEEEEEeeC----CCeEEEEcCCCcEEEEEecCCccc-ceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 14 FQTRCIKCFPN----KQGYVLSSIEGRAAVEYLDTGPEM-QKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 14 ~~~~~i~~~~~----~~~l~~~~~~g~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.|+..++|.|- ...+++......|.||.+-..... .+......+.-.+. ..---.++.|||....|+.-..
T Consensus 57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~----~pvLpQGCVWHPk~~iL~VLT~ 132 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREP----FPVLPQGCVWHPKKAILTVLTA 132 (671)
T ss_pred ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCC----cccCCCcccccCCCceEEEEec
Confidence 46788999984 335666678889999887654311 22222222221110 0012347889999988877665
Q ss_pred CCeEEEEeCCCc-ccee-eeeecccceeEE-EcCCCCEEEEecCC-CeEEEEeCCCc
Q psy1859 89 DGYVNIWDGFNK-KRLC-QFHRYDTGITSL-FHQEYNTFATGGSD-GYVNIWDGFNK 141 (162)
Q Consensus 89 d~~v~~wd~~~~-~~~~-~~~~~~~~v~~~-~~~~~~~l~~~~~d-~~i~iwd~~~~ 141 (162)
...-.+++++.. ..++ .+ ...+-|.|. |.+||+.|+++-.. =.-++||-..+
T Consensus 133 ~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 133 RDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred CceeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 555456666543 2332 33 345678888 99999987776443 34678986544
No 356
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.09 E-value=0.028 Score=40.00 Aligned_cols=90 Identities=21% Similarity=0.190 Sum_probs=58.3
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCcc-------------------------------------------ceeee
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKK-------------------------------------------RLCQF 106 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~-------------------------------------------~~~~~ 106 (162)
.|+.+.|+++...|+++...|.|.+|.....+ +...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 48899999998899999999999888543211 01111
Q ss_pred eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec--c------CCCceeEEEec
Q psy1859 107 HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH--R------YDTGITSLCFS 160 (162)
Q Consensus 107 ~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~------~~~~v~~v~~~ 160 (162)
....++|+++ .| |=.+++.|..+|.+.|.|+|....+..-. . ....|+++.|+
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~ 144 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFS 144 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEE
Confidence 2234677787 76 55699999999999999999887665421 1 23467888885
No 357
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.00 E-value=0.048 Score=36.26 Aligned_cols=140 Identities=8% Similarity=0.037 Sum_probs=68.4
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCccccee----eeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKM----KYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
...|++.-++.++++--.++.+.+...+..+..... .+.+... ..+...+..++|+|.++.|+.+-...-
T Consensus 67 ~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~------~~~N~G~EGla~D~~~~~L~v~kE~~P 140 (248)
T PF06977_consen 67 YEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFP------NKGNKGFEGLAYDPKTNRLFVAKERKP 140 (248)
T ss_dssp EEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---------SS--EEEEEETTTTEEEEEEESSS
T ss_pred ceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccc------cCCCcceEEEEEcCCCCEEEEEeCCCC
Confidence 456777766666665555788887666433211111 1111111 012226899999998866666655544
Q ss_pred EEEEeCCC---ccceeee--------eecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCC-------
Q psy1859 92 VNIWDGFN---KKRLCQF--------HRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD------- 151 (162)
Q Consensus 92 v~~wd~~~---~~~~~~~--------~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------- 151 (162)
..+|.++. ...+... ......+..+ ++| .+.+++.+..+..|..+| .+|+.+..+....
T Consensus 141 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~ 219 (248)
T PF06977_consen 141 KRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSK 219 (248)
T ss_dssp EEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS
T ss_pred hhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCccc
Confidence 55555543 1111111 1122346677 888 556777788888999999 5777666554222
Q ss_pred --CceeEEEecCC
Q psy1859 152 --TGITSLCFSYD 162 (162)
Q Consensus 152 --~~v~~v~~~pd 162 (162)
...-.|+|.+|
T Consensus 220 ~~~QpEGIa~d~~ 232 (248)
T PF06977_consen 220 DIPQPEGIAFDPD 232 (248)
T ss_dssp ---SEEEEEE-TT
T ss_pred ccCCccEEEECCC
Confidence 24567787764
No 358
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.95 E-value=0.026 Score=32.39 Aligned_cols=62 Identities=21% Similarity=0.316 Sum_probs=43.3
Q ss_pred EEEecCCC-CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 73 AISFHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 73 ~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
-+.|..+| +.|++|+.|..|++|+-. ..+.++.. ...++.+ -. .+..++.+-.+|+|-+|+-
T Consensus 7 ~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~-~~~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 7 LFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITE-TDKVTSLCSL-GGGRFAYALANGTVGVYDR 70 (111)
T ss_pred EEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEec-ccceEEEEEc-CCCEEEEEecCCEEEEEeC
Confidence 34445555 789999999999999854 45566653 3455555 22 2367888889998888875
No 359
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.90 E-value=0.062 Score=37.22 Aligned_cols=64 Identities=16% Similarity=0.221 Sum_probs=42.7
Q ss_pred CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEe-cCCCeEEEEeCCCccceeeeeec
Q psy1859 34 EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATG-GSDGYVNIWDGFNKKRLCQFHRY 109 (162)
Q Consensus 34 ~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~-~~d~~v~~wd~~~~~~~~~~~~~ 109 (162)
++.-.||.+|..+ .+.+..+.... ++.+|+.+.+. .+|++. ..++.+.+||..+++.+.++..-
T Consensus 266 dpgteVWv~D~~t--~krv~Ri~l~~----------~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 266 DPGTEVWVYDLKT--HKRVARIPLEH----------PIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp S-EEEEEEEETTT--TEEEEEEEEEE----------EESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred CCceEEEEEECCC--CeEEEEEeCCC----------ccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence 3456789999887 55555544332 47799999887 466554 46899999999999998888654
No 360
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.90 E-value=0.065 Score=36.18 Aligned_cols=56 Identities=14% Similarity=0.261 Sum_probs=44.0
Q ss_pred EEecCCCCEEEEecCC-----CeEEEEeCCCc-cceeeeeecccceeEE-EcCCCCEEEEecC
Q psy1859 74 ISFHQEYNTFATGGSD-----GYVNIWDGFNK-KRLCQFHRYDTGITSL-FHQEYNTFATGGS 129 (162)
Q Consensus 74 ~~~~p~~~~l~~~~~d-----~~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~ 129 (162)
=.|||+|.+|.+.-.| |.|=+||.+.+ +.+-++..|.-....+ +.+||+.++.+..
T Consensus 119 Gvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanG 181 (366)
T COG3490 119 GVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANG 181 (366)
T ss_pred cccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCC
Confidence 4589999888776443 88999999864 4566777787778888 9999999988754
No 361
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.88 E-value=0.0067 Score=28.38 Aligned_cols=30 Identities=27% Similarity=0.278 Sum_probs=25.5
Q ss_pred ceEEEEecCCC---CEEEEecCCCeEEEEeCCC
Q psy1859 70 PVNAISFHQEY---NTFATGGSDGYVNIWDGFN 99 (162)
Q Consensus 70 ~v~~~~~~p~~---~~l~~~~~d~~v~~wd~~~ 99 (162)
++.++.|+|+. .+|+..-..+.+.++|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 68999999854 4888888889999999995
No 362
>KOG4649|consensus
Probab=96.85 E-value=0.067 Score=35.67 Aligned_cols=82 Identities=13% Similarity=0.009 Sum_probs=53.3
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceE-EEEecCCCCEEEEecCCCeEEEEeCCCccc
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVN-AISFHQEYNTFATGGSDGYVNIWDGFNKKR 102 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~ 102 (162)
-|++++.|...|.+++ ++.++ ......+..-. .|. .....+++.++..++.|+..+..|.++...
T Consensus 62 vgdfVV~GCy~g~lYf--l~~~t--Gs~~w~f~~~~----------~vk~~a~~d~~~glIycgshd~~~yalD~~~~~c 127 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYF--LCVKT--GSQIWNFVILE----------TVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGC 127 (354)
T ss_pred ECCEEEEEEccCcEEE--EEecc--hhheeeeeehh----------hhccceEEcCCCceEEEecCCCcEEEecccccce
Confidence 4677889999998888 55444 22333322221 122 223467789999999999999999999888
Q ss_pred eeeeeecccceeEE-EcC
Q psy1859 103 LCQFHRYDTGITSL-FHQ 119 (162)
Q Consensus 103 ~~~~~~~~~~v~~~-~~~ 119 (162)
+.+.+...+....- ..|
T Consensus 128 VykskcgG~~f~sP~i~~ 145 (354)
T KOG4649|consen 128 VYKSKCGGGTFVSPVIAP 145 (354)
T ss_pred EEecccCCceeccceecC
Confidence 87766544433333 555
No 363
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.79 E-value=0.035 Score=37.43 Aligned_cols=93 Identities=15% Similarity=0.249 Sum_probs=61.0
Q ss_pred ceEEEEecCCC-CEEEEecCCC-eEEEEeCCCccceeeeeecccc-eeEE--EcCCCCEEEEecCC-----CeEEEEeCC
Q psy1859 70 PVNAISFHQEY-NTFATGGSDG-YVNIWDGFNKKRLCQFHRYDTG-ITSL--FHQEYNTFATGGSD-----GYVNIWDGF 139 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~-~v~~wd~~~~~~~~~~~~~~~~-v~~~--~~~~~~~l~~~~~d-----~~i~iwd~~ 139 (162)
....|+++|.- .-++.+-.-| ...++|....+....+...++. ...- |||||++|...-.| |.|-|||.+
T Consensus 69 R~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 69 RGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred ccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence 35678888876 4444454444 4568999888776666543332 2222 99999999887544 689999998
Q ss_pred Cce-eeeeeccCCCceeEEEecCC
Q psy1859 140 NKK-RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 140 ~~~-~~~~~~~~~~~v~~v~~~pd 162 (162)
.+- .+..+..|.-....+.|.+|
T Consensus 149 ~~fqrvgE~~t~GiGpHev~lm~D 172 (366)
T COG3490 149 EGFQRVGEFSTHGIGPHEVTLMAD 172 (366)
T ss_pred cccceecccccCCcCcceeEEecC
Confidence 552 35556666656666666654
No 364
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.79 E-value=0.092 Score=36.40 Aligned_cols=79 Identities=18% Similarity=0.243 Sum_probs=51.1
Q ss_pred eEEEEecCCCCEEEE-ec--C-----C--CeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEe-cCCCeEEEEe
Q psy1859 71 VNAISFHQEYNTFAT-GG--S-----D--GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATG-GSDGYVNIWD 137 (162)
Q Consensus 71 v~~~~~~p~~~~l~~-~~--~-----d--~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~-~~d~~i~iwd 137 (162)
-.-+++++..+.|.+ -. . | ..|+++|+.+++.+.++.. ..++.++ .+.+.+ +|++. ..++.|.+||
T Consensus 240 ~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D 318 (342)
T PF06433_consen 240 WQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYD 318 (342)
T ss_dssp SS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEE
T ss_pred eeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEe
Confidence 445777765533332 11 1 1 3588889999999998874 3457788 888655 55544 5689999999
Q ss_pred CCCceeeeeeccC
Q psy1859 138 GFNKKRLCQFHRY 150 (162)
Q Consensus 138 ~~~~~~~~~~~~~ 150 (162)
..+|+.++++..-
T Consensus 319 ~~tGk~~~~~~~l 331 (342)
T PF06433_consen 319 AATGKLVRSIEQL 331 (342)
T ss_dssp TTT--EEEEE---
T ss_pred CcCCcEEeehhcc
Confidence 9999999888643
No 365
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=96.79 E-value=0.053 Score=38.60 Aligned_cols=68 Identities=13% Similarity=0.060 Sum_probs=47.1
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeecccc-eeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTG-ITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~-v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
+..+..++.++.+..+|..+++.+......... .... . .+.+++.++.+|.|...|..+|+.+.+...
T Consensus 294 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~ 363 (394)
T PRK11138 294 GGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKV 363 (394)
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEc
Confidence 556777788999999999988765443221111 1111 2 356788889999999999999988776643
No 366
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.78 E-value=0.011 Score=44.20 Aligned_cols=87 Identities=11% Similarity=-0.042 Sum_probs=50.9
Q ss_pred ceEEEEecCCCCEEEEec------CCC--eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC----------
Q psy1859 70 PVNAISFHQEYNTFATGG------SDG--YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD---------- 130 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~------~d~--~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d---------- 130 (162)
.+.+.+++|+|+.++... .|. .|++++.. +.. ..+.. ....+.- |+|+|+.+++....
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~ 427 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIRDP 427 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeec-CCCCCCceECCCCCceEEEecCcceEEEeccC
Confidence 478899999998776554 233 55555642 222 33322 2235556 99998877777433
Q ss_pred --CeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 131 --GYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 131 --~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.+.+.++..+.... .....|.++.||||
T Consensus 428 ~~gql~~~~vd~ge~~~---~~~g~Issl~wSpD 458 (591)
T PRK13616 428 ATGQLARTPVDASAVAS---RVPGPISELQLSRD 458 (591)
T ss_pred CCceEEEEeccCchhhh---ccCCCcCeEEECCC
Confidence 233333443332221 23457999999997
No 367
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.77 E-value=0.11 Score=36.95 Aligned_cols=117 Identities=12% Similarity=0.134 Sum_probs=73.9
Q ss_pred EEEEEEeeCCCeEEEEcC---CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEE-ecCCCe
Q psy1859 16 TRCIKCFPNKQGYVLSSI---EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT-GGSDGY 91 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~---~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~-~~~d~~ 91 (162)
...++++|+++.+.++.. ++++.+ +|..+ .+.......-.. + ..++++|++..+.. -..++.
T Consensus 118 P~~~~~~~~~~~vYV~n~~~~~~~vsv--id~~t--~~~~~~~~vG~~---------P-~~~a~~p~g~~vyv~~~~~~~ 183 (381)
T COG3391 118 PVGLAVDPDGKYVYVANAGNGNNTVSV--IDAAT--NKVTATIPVGNT---------P-TGVAVDPDGNKVYVTNSDDNT 183 (381)
T ss_pred CceEEECCCCCEEEEEecccCCceEEE--EeCCC--CeEEEEEecCCC---------c-ceEEECCCCCeEEEEecCCCe
Confidence 356889999887777655 455555 77765 333332111111 3 78999999975554 457899
Q ss_pred EEEEeCCCcccee-e---eeecccceeEE-EcCCCCEEEEecCC---CeEEEEeCCCceeeee
Q psy1859 92 VNIWDGFNKKRLC-Q---FHRYDTGITSL-FHQEYNTFATGGSD---GYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 92 v~~wd~~~~~~~~-~---~~~~~~~v~~~-~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~ 146 (162)
+.+.|.......+ . ..........+ ++|+|.++...... +.+...|..++.....
T Consensus 184 v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~ 246 (381)
T COG3391 184 VSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTAT 246 (381)
T ss_pred EEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEe
Confidence 9999976654442 1 01122333455 89999977776544 5899999888765543
No 368
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.69 E-value=0.059 Score=37.06 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=61.5
Q ss_pred EEEEEeeCCCeEEEEcC-CCcEEEEEecCCcc---cceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC-e
Q psy1859 17 RCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPE---MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG-Y 91 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~-~ 91 (162)
..|+||||++.++.+.. .+.+.-+.++.... .......+.. ..+..-.++...+|.+.+++..+| .
T Consensus 166 NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~---------~~G~PDG~~vDadG~lw~~a~~~g~~ 236 (307)
T COG3386 166 NGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDE---------EPGLPDGMAVDADGNLWVAAVWGGGR 236 (307)
T ss_pred CceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccC---------CCCCCCceEEeCCCCEEEecccCCce
Confidence 45999999988877744 46666666663210 0111111111 112456777888888876555554 9
Q ss_pred EEEEeCCCccceeeeeecccceeEE-E-cCCCCEEEEe
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-F-HQEYNTFATG 127 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~-~~~~~~l~~~ 127 (162)
|..|+.. ++++..+.-....++++ | -|+.+.|+..
T Consensus 237 v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iT 273 (307)
T COG3386 237 VVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYIT 273 (307)
T ss_pred EEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEE
Confidence 9999988 88888877665666666 4 3455544443
No 369
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.69 E-value=0.013 Score=27.39 Aligned_cols=30 Identities=23% Similarity=0.261 Sum_probs=24.9
Q ss_pred ceeEE-EcCC-C--CEEEEecCCCeEEEEeCCCc
Q psy1859 112 GITSL-FHQE-Y--NTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 112 ~v~~~-~~~~-~--~~l~~~~~d~~i~iwd~~~~ 141 (162)
.+.++ |+|+ + .+|+.+-.-+.+.|+|++++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 57788 9984 4 58999988999999999953
No 370
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.69 E-value=0.096 Score=35.20 Aligned_cols=121 Identities=13% Similarity=0.088 Sum_probs=66.3
Q ss_pred eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccc
Q psy1859 23 PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKR 102 (162)
Q Consensus 23 ~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~ 102 (162)
..++.++.|+.+| +.+++.+... ...... .. ..|..+..-|+-+.+++-+ |+.+.++++..-..
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~-~~~~i~----~~---------~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~ 68 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPS-KPTRIL----KL---------SSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEP 68 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCc-cceeEe----ec---------ceEEEEEEecccCEEEEEc-CCccEEEEchhhcc
Confidence 4578899999888 6665551111 011111 11 1488888888877766664 59999999886433
Q ss_pred eeeee-----------ecccceeEE--Ec----CCC-CEEEEecCCCeEEEEeCCCc-----eeeeeeccCCCceeEEEe
Q psy1859 103 LCQFH-----------RYDTGITSL--FH----QEY-NTFATGGSDGYVNIWDGFNK-----KRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 103 ~~~~~-----------~~~~~v~~~--~~----~~~-~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~~~v~~v~~ 159 (162)
..... ..-.....+ |. ..+ ..|+.+ ....|.+|..... +....+. -...+.+++|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~ 146 (275)
T PF00780_consen 69 VSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA-VKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAF 146 (275)
T ss_pred ccccccccccccccccccccccCCeeEEeeccccccceEEEEE-ECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEE
Confidence 32110 001111112 44 233 344444 4448888877542 3444444 3456777877
Q ss_pred cC
Q psy1859 160 SY 161 (162)
Q Consensus 160 ~p 161 (162)
.+
T Consensus 147 ~~ 148 (275)
T PF00780_consen 147 LG 148 (275)
T ss_pred eC
Confidence 64
No 371
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.67 E-value=0.094 Score=39.51 Aligned_cols=106 Identities=11% Similarity=0.109 Sum_probs=62.4
Q ss_pred EEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEe--cCCCCEEEEecCCCeEEEEe
Q psy1859 19 IKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISF--HQEYNTFATGGSDGYVNIWD 96 (162)
Q Consensus 19 i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~l~~~~~d~~v~~wd 96 (162)
+..+.-++..++-+....+.||+..... .+....+. ..+.|.+++| .|+++.+++.+....|.++.
T Consensus 35 i~gss~~k~a~V~~~~~~LtIWD~~~~~--lE~~~~f~----------~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 35 ISGSSIKKIAVVDSSRSELTIWDTRSGV--LEYEESFS----------EDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred EeecccCcEEEEECCCCEEEEEEcCCcE--EEEeeeec----------CCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 3444444444444445567785543322 22222221 2236999999 56788888888999999885
Q ss_pred CC-----C----ccceeeee--ecc-cceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 97 GF-----N----KKRLCQFH--RYD-TGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 97 ~~-----~----~~~~~~~~--~~~-~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
-. + ..+++.+. .+. .+|.+. |-++|.+++.+ ++.+.|+|-
T Consensus 103 Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk 155 (631)
T PF12234_consen 103 QLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK 155 (631)
T ss_pred ccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence 42 1 13344443 232 567777 99999766655 346777764
No 372
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=96.64 E-value=0.071 Score=37.95 Aligned_cols=67 Identities=10% Similarity=-0.016 Sum_probs=47.9
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
+..++.++.++.+..+|.++|+.+.+..... .+.+- .- .+..++.+..++.+.-+|.++|+.+..+.
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~ssP~v-~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 187 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAG-EALSRPVV-SDGLVLVHTSNGMLQALNESDGAVKWTVN 187 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCC-ceecCCEE-ECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence 4566778889999999999998877665332 22221 11 24467777888999999999998877664
No 373
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=96.60 E-value=0.11 Score=40.05 Aligned_cols=91 Identities=14% Similarity=0.130 Sum_probs=56.2
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEE---ecCCc--ccceeeeeeeeeeecc--CcccceeceEEEEecCCC--
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEY---LDTGP--EMQKMKYAFKCHRIKE--DGIEKIYPVNAISFHQEY-- 80 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~---~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~p~~-- 80 (162)
.+....|..|..+|+|..++..+..|-..+.- |-... ...+.....+...... ........|..+.|||.+
T Consensus 81 ~~~~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~ 160 (717)
T PF10168_consen 81 NPPLFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSES 160 (717)
T ss_pred CCCceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCC
Confidence 45667889999999999999988876555421 10000 0001111111111000 111234479999999974
Q ss_pred -CEEEEecCCCeEEEEeCCCc
Q psy1859 81 -NTFATGGSDGYVNIWDGFNK 100 (162)
Q Consensus 81 -~~l~~~~~d~~v~~wd~~~~ 100 (162)
..|+.-+.|+.+++||+...
T Consensus 161 ~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 161 DSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCeEEEEecCCEEEEEecCCC
Confidence 78889999999999999864
No 374
>KOG4499|consensus
Probab=96.50 E-value=0.12 Score=33.98 Aligned_cols=105 Identities=14% Similarity=0.118 Sum_probs=69.2
Q ss_pred EEEEeeCCCeEEE-EcCCCcEEEEEecCCccc---ceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 18 CIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEM---QKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 18 ~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.++|+.+.+.+.. -+.+-+|.-|++|..++. .+.++.++..+..+ +. ..-.++..-+|++++++-..+.|.
T Consensus 162 gl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e----~~-~PDGm~ID~eG~L~Va~~ng~~V~ 236 (310)
T KOG4499|consen 162 GLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFE----SL-EPDGMTIDTEGNLYVATFNGGTVQ 236 (310)
T ss_pred cccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcC----CC-CCCcceEccCCcEEEEEecCcEEE
Confidence 4678877665554 466667777888876532 33444444322111 11 123455566889999999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcC-CCCEEEEe
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATG 127 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~ 127 (162)
..|..+|+.+.++.-....++++ |-- +-..+++.
T Consensus 237 ~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~yvT 272 (310)
T KOG4499|consen 237 KVDPTTGKILLEIKLPTPQITSCCFGGKNLDILYVT 272 (310)
T ss_pred EECCCCCcEEEEEEcCCCceEEEEecCCCccEEEEE
Confidence 99999999999988878888888 653 33344433
No 375
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.46 E-value=0.11 Score=35.28 Aligned_cols=119 Identities=8% Similarity=0.058 Sum_probs=76.7
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.......+.++.|+|+.+.|.+..+...-.|+ ++... ..-....+.+-. ....+.+..++++.++--.
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVE-lt~~G-dlirtiPL~g~~----------DpE~Ieyig~n~fvi~dER 148 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVE-LTKEG-DLIRTIPLTGFS----------DPETIEYIGGNQFVIVDER 148 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEE-EecCC-ceEEEecccccC----------ChhHeEEecCCEEEEEehh
Confidence 34555668899999999988888777766654 34321 122223333322 2456777777777778888
Q ss_pred CCeEEEEeCCCcccee-----eee-----ecccceeEE-EcCCCCEEEEecCCCeEEEEeCC
Q psy1859 89 DGYVNIWDGFNKKRLC-----QFH-----RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~-----~~~-----~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~ 139 (162)
+..+.++.+.....+. .+. ..+.....+ |+|....|+.+-+-.-+.|+.+.
T Consensus 149 ~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 149 DRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred cceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence 8999988777542221 111 113455667 99988888888777777777665
No 376
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.41 E-value=0.17 Score=34.74 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=61.9
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
......+.+..+.-+++|++++++. .|.+.+ .++........... ... ..|.+|.|.|++.+.+.+
T Consensus 139 ~~~~~~gs~~~~~r~~dG~~vavs~-~G~~~~-s~~~G~~~w~~~~r---~~~--------~riq~~gf~~~~~lw~~~- 204 (302)
T PF14870_consen 139 VVSETSGSINDITRSSDGRYVAVSS-RGNFYS-SWDPGQTTWQPHNR---NSS--------RRIQSMGFSPDGNLWMLA- 204 (302)
T ss_dssp EE-S----EEEEEE-TTS-EEEEET-TSSEEE-EE-TT-SS-EEEE-----SS--------S-EEEEEE-TTS-EEEEE-
T ss_pred cccCCcceeEeEEECCCCcEEEEEC-cccEEE-EecCCCccceEEcc---Ccc--------ceehhceecCCCCEEEEe-
Confidence 3444556677788889999877764 455443 25543211111111 111 169999999998776655
Q ss_pred CCCeEEEEeC-CCcccee----eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee---eeeeccCCCceeEEE
Q psy1859 88 SDGYVNIWDG-FNKKRLC----QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR---LCQFHRYDTGITSLC 158 (162)
Q Consensus 88 ~d~~v~~wd~-~~~~~~~----~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~v~ 158 (162)
..|.|+.=+. ...+... .+....-.+..+ |.+++...++|+.. .+. .....|+. ......-...++.|.
T Consensus 205 ~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G-~l~-~S~DgGktW~~~~~~~~~~~n~~~i~ 282 (302)
T PF14870_consen 205 RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG-TLL-VSTDGGKTWQKDRVGENVPSNLYRIV 282 (302)
T ss_dssp TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT--EE-EESSTTSS-EE-GGGTTSSS---EEE
T ss_pred CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCc-cEE-EeCCCCccceECccccCCCCceEEEE
Confidence 8888888772 2222111 111222346778 99888777766544 332 34444432 111122344566666
Q ss_pred ec
Q psy1859 159 FS 160 (162)
Q Consensus 159 ~~ 160 (162)
|.
T Consensus 283 f~ 284 (302)
T PF14870_consen 283 FV 284 (302)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 377
>KOG1008|consensus
Probab=96.38 E-value=0.0017 Score=47.78 Aligned_cols=108 Identities=15% Similarity=0.177 Sum_probs=65.3
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC-CCEEEEecCCCeEEEE
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE-YNTFATGGSDGYVNIW 95 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~d~~v~~w 95 (162)
.+++|-.+.+.+++|.....+.+.++.... .... .+ .+ ..+..+...|. ..++++-. |+.+.+|
T Consensus 158 ns~cwlrd~klvlaGm~sr~~~ifdlRqs~--~~~~-sv--nT---------k~vqG~tVdp~~~nY~cs~~-dg~iAiw 222 (783)
T KOG1008|consen 158 NSVCWLRDTKLVLAGMTSRSVHIFDLRQSL--DSVS-SV--NT---------KYVQGITVDPFSPNYFCSNS-DGDIAIW 222 (783)
T ss_pred cccccccCcchhhcccccchhhhhhhhhhh--hhhh-hh--hh---------hhcccceecCCCCCceeccc-cCceeec
Confidence 477888788888888888888884433111 1111 11 11 14667777883 46666655 9999999
Q ss_pred e-CCC-ccceeeeeeccc----ceeEE-EcCC-CCEEEEec-CCCeEEEEeCC
Q psy1859 96 D-GFN-KKRLCQFHRYDT----GITSL-FHQE-YNTFATGG-SDGYVNIWDGF 139 (162)
Q Consensus 96 d-~~~-~~~~~~~~~~~~----~v~~~-~~~~-~~~l~~~~-~d~~i~iwd~~ 139 (162)
| .++ ..++..+..... .+..+ |.|. ...+++.. +.++|+.+|+.
T Consensus 223 D~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 223 DTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred cchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 9 443 234443332222 37777 8882 22444444 55789999986
No 378
>KOG2395|consensus
Probab=96.34 E-value=0.06 Score=39.29 Aligned_cols=66 Identities=9% Similarity=0.180 Sum_probs=48.6
Q ss_pred eEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 71 VNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
..|.+-..+| .+++|+.+|.|++||--.......+++-+.+|..+ .+.+|++++..+.. .+.+-++
T Consensus 433 Fsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~t-yLlLi~t 499 (644)
T KOG2395|consen 433 FSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKT-YLLLIDT 499 (644)
T ss_pred cceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEeccc-EEEEEEE
Confidence 4555555444 78899999999999974444455677888999999 99999988777544 5555554
No 379
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=96.30 E-value=0.034 Score=25.58 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=29.6
Q ss_pred CCCCEEEEec-CCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 119 QEYNTFATGG-SDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 119 ~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
|++++++++. .++.|.++|..+++.+..+.. ......++|+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~~ 42 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAVS 42 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEeC
Confidence 5677777665 578999999999888887765 3345566653
No 380
>KOG2395|consensus
Probab=96.30 E-value=0.072 Score=38.93 Aligned_cols=112 Identities=15% Similarity=0.165 Sum_probs=61.6
Q ss_pred EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCC-------EEEEecCCCeEEEEeCCCc-cceeeeee
Q psy1859 37 AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN-------TFATGGSDGYVNIWDGFNK-KRLCQFHR 108 (162)
Q Consensus 37 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-------~l~~~~~d~~v~~wd~~~~-~~~~~~~~ 108 (162)
-.|+.+|... .+.+-.-+-+. .|.-+.+.|+.+ .-+.|-.+..|.-||.+-. +.......
T Consensus 356 ~~l~klDIE~--GKIVeEWk~~~----------di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q 423 (644)
T KOG2395|consen 356 DKLYKLDIER--GKIVEEWKFED----------DINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQ 423 (644)
T ss_pred Ccceeeeccc--ceeeeEeeccC----------CcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeee
Confidence 3455566665 33333333332 266677777642 2335667888999999842 21111111
Q ss_pred ccc-----ceeEEEcCCCCEEEEecCCCeEEEEeCCCcee-eeeeccCCCceeEEEecC
Q psy1859 109 YDT-----GITSLFHQEYNTFATGGSDGYVNIWDGFNKKR-LCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 109 ~~~-----~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~v~~~p 161 (162)
... ...|.-.-...++++|+.+|.|++||- .+.. -.-+++...+|..|..+.
T Consensus 424 ~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvta 481 (644)
T KOG2395|consen 424 SKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTA 481 (644)
T ss_pred ccccccccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeec
Confidence 111 222221124458999999999999996 4432 223455666777665543
No 381
>KOG2377|consensus
Probab=96.25 E-value=0.26 Score=35.67 Aligned_cols=90 Identities=10% Similarity=0.181 Sum_probs=51.9
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccce--e--eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC-cee
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL--C--QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN-KKR 143 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~--~--~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~-~~~ 143 (162)
+|.++.||+|.+.+++--.+..|.+++....+.. . +.+.....|... |+.. .-++.....| +-+|.+.. ++.
T Consensus 68 ~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrs 145 (657)
T KOG2377|consen 68 EIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRS 145 (657)
T ss_pred ceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhh
Confidence 7999999999999999999999999998543222 1 222223345566 7655 3444443333 34443321 222
Q ss_pred eeeeccCCCceeEEEecC
Q psy1859 144 LCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 144 ~~~~~~~~~~v~~v~~~p 161 (162)
++..+.|.-.|.-..|+|
T Consensus 146 lRlVks~~~nvnWy~yc~ 163 (657)
T KOG2377|consen 146 LRLVKSHNLNVNWYMYCP 163 (657)
T ss_pred hhhhhhcccCccEEEEcc
Confidence 333344444555555544
No 382
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=96.17 E-value=0.084 Score=37.25 Aligned_cols=90 Identities=6% Similarity=-0.138 Sum_probs=45.9
Q ss_pred eEEEEecCCCCEEE-EecCC--CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee
Q psy1859 71 VNAISFHQEYNTFA-TGGSD--GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 71 v~~~~~~p~~~~l~-~~~~d--~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 146 (162)
.+.=+|.++|+.|+ .+..| ..+.+.|+.+++..+.-.......... ++|+.+.++.......|+-.|+.+++....
T Consensus 38 F~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~v 117 (386)
T PF14583_consen 38 FYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVV 117 (386)
T ss_dssp TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEE
T ss_pred ecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEE
Confidence 44456788885555 44445 456677888776544333221222233 788888887766667889999999876555
Q ss_pred eccCCCceeEEEec
Q psy1859 147 FHRYDTGITSLCFS 160 (162)
Q Consensus 147 ~~~~~~~v~~v~~~ 160 (162)
+......+....|.
T Consensus 118 y~~p~~~~g~gt~v 131 (386)
T PF14583_consen 118 YEVPDDWKGYGTWV 131 (386)
T ss_dssp EE--TTEEEEEEEE
T ss_pred EECCccccccccee
Confidence 65555555445553
No 383
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.16 E-value=0.21 Score=33.38 Aligned_cols=134 Identities=12% Similarity=0.042 Sum_probs=78.0
Q ss_pred cEEEEEEeeCCCeEEEEc-CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 15 QTRCIKCFPNKQGYVLSS-IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~-~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.+...+++++++.++... .++.-.||....... ..... .+. .+....|++++...+....+...+
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~-~~~~~--~g~-----------~l~~PS~d~~g~~W~v~~~~~~~~ 90 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP-VRPVL--TGG-----------SLTRPSWDPDGWVWTVDDGSGGVR 90 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc-ceeec--cCC-----------ccccccccCCCCEEEEEcCCCceE
Confidence 567889999998776655 333344444543321 11111 221 477889999988777777666666
Q ss_pred EEe-CCCcccee-eeee--cccceeEE-EcCCCCEEEEec---CCCeEEEEeCC---Cc--e----eeeeeccCCCceeE
Q psy1859 94 IWD-GFNKKRLC-QFHR--YDTGITSL-FHQEYNTFATGG---SDGYVNIWDGF---NK--K----RLCQFHRYDTGITS 156 (162)
Q Consensus 94 ~wd-~~~~~~~~-~~~~--~~~~v~~~-~~~~~~~l~~~~---~d~~i~iwd~~---~~--~----~~~~~~~~~~~v~~ 156 (162)
++. ...+.... .... ....|..+ +||||..++... .++.|.+--+. .+ . .+.........+.+
T Consensus 91 ~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~ 170 (253)
T PF10647_consen 91 VVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTD 170 (253)
T ss_pred EEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCccee
Confidence 663 33332211 1111 11278999 999999877765 35677776543 22 1 11212233457889
Q ss_pred EEecCC
Q psy1859 157 LCFSYD 162 (162)
Q Consensus 157 v~~~pd 162 (162)
+.|.++
T Consensus 171 v~W~~~ 176 (253)
T PF10647_consen 171 VAWSDD 176 (253)
T ss_pred eeecCC
Confidence 999875
No 384
>KOG2377|consensus
Probab=96.15 E-value=0.11 Score=37.51 Aligned_cols=121 Identities=9% Similarity=0.092 Sum_probs=72.9
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..-+|.|.+|.|++|.+.+++--.+.+|.++.+...+ .+.....++.... ..|.+..|+.. .-++..+..
T Consensus 63 m~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~--~~l~~~~~ck~k~-------~~IlGF~W~~s-~e~A~i~~~ 132 (657)
T KOG2377|consen 63 MDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDN--SQLEYTQECKTKN-------ANILGFCWTSS-TEIAFITDQ 132 (657)
T ss_pred ecCCCceeEEEeccCcceEEEEecCceEEEEecCCCc--hhhHHHHHhccCc-------ceeEEEEEecC-eeEEEEecC
Confidence 3456899999999999999999999999997775544 2223332332221 14889999876 344444433
Q ss_pred CeEEEEeCCCc-cceeeeeecccceeEE-EcCCCCEEE--EecCCCeEEEEeCCCc
Q psy1859 90 GYVNIWDGFNK-KRLCQFHRYDTGITSL-FHQEYNTFA--TGGSDGYVNIWDGFNK 141 (162)
Q Consensus 90 ~~v~~wd~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~--~~~~d~~i~iwd~~~~ 141 (162)
| +-+|..... +.++..+.+.-.|.-. |.++.+.+. ++-..+.+.-+.++++
T Consensus 133 G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~ 187 (657)
T KOG2377|consen 133 G-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAG 187 (657)
T ss_pred C-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeec
Confidence 3 455555443 2334444555666666 788776433 3324455554544443
No 385
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.10 E-value=0.3 Score=34.56 Aligned_cols=102 Identities=14% Similarity=0.105 Sum_probs=51.0
Q ss_pred ccEEEEEEeeCCCeEEEEc-----------CCC-cEEEEEecCCcccce--eeeeeeeeeeccCcccceeceEEEEecCC
Q psy1859 14 FQTRCIKCFPNKQGYVLSS-----------IEG-RAAVEYLDTGPEMQK--MKYAFKCHRIKEDGIEKIYPVNAISFHQE 79 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~-----------~~g-~i~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 79 (162)
.....|+|.++|+.+++-. ..+ .|.+ ++......+ ....+...- .....+++.++
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~--l~d~dgdG~~d~~~vfa~~l---------~~p~Gi~~~~~ 82 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILI--LEDADGDGKYDKSNVFAEEL---------SMVTGLAVAVG 82 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEE--EEcCCCCCCcceeEEeecCC---------CCccceeEecC
Confidence 3446899999999877743 122 4544 443221111 111111111 13678999998
Q ss_pred CCEEEEecCCCeEEEEeCCCc-----cc---eeeeeec----ccceeEE-EcCCCCEEEEec
Q psy1859 80 YNTFATGGSDGYVNIWDGFNK-----KR---LCQFHRY----DTGITSL-FHQEYNTFATGG 128 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~-----~~---~~~~~~~----~~~v~~~-~~~~~~~l~~~~ 128 (162)
+ ++++ ......++.|.... +. +..+... ......+ |.|||.+.++-+
T Consensus 83 G-lyV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 83 G-VYVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred C-EEEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 8 5554 33433334454321 11 1112211 2335567 999998766554
No 386
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.99 E-value=0.097 Score=34.18 Aligned_cols=65 Identities=14% Similarity=0.062 Sum_probs=47.2
Q ss_pred ecCCCCEEEEecCCCeEEEEeCCCccceeee-------e-------ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 76 FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF-------H-------RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 76 ~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~-------~-------~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
+...+.++++.+.+|.+++||+.+.+.+..- . .....|..+ ++.+|.-+++-+ +|....|+..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 4456788999999999999999987654321 1 234567777 888888877765 46788888754
Q ss_pred c
Q psy1859 141 K 141 (162)
Q Consensus 141 ~ 141 (162)
+
T Consensus 97 ~ 97 (219)
T PF07569_consen 97 G 97 (219)
T ss_pred c
Confidence 4
No 387
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.94 E-value=0.23 Score=35.72 Aligned_cols=92 Identities=15% Similarity=0.179 Sum_probs=52.0
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc--------CcccceeceEEEEecCCCC--E
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE--------DGIEKIYPVNAISFHQEYN--T 82 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~p~~~--~ 82 (162)
+.++.+|+.+|.+++.++...-|.|.| +|... ...+...++.+... ....+...-....-.+... +
T Consensus 307 ~R~~~~i~~sP~~~laA~tDslGRV~L--iD~~~--~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~L 382 (415)
T PF14655_consen 307 KREGESICLSPSGRLAAVTDSLGRVLL--IDVAR--GIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFL 382 (415)
T ss_pred CceEEEEEECCCCCEEEEEcCCCcEEE--EECCC--ChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEE
Confidence 345677999999988888766789998 66555 44444445544321 0000000000000000011 3
Q ss_pred EEEecCCCeEEEEeCCCccceeeeee
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLCQFHR 108 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~~~~~ 108 (162)
++-.-..|.|.+|.++.+..+..+..
T Consensus 383 vIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 383 VIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred EEEeccCCeEEEEecCCCCEEEEEEe
Confidence 34466789999999999888776654
No 388
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.81 E-value=0.33 Score=34.83 Aligned_cols=92 Identities=15% Similarity=0.048 Sum_probs=53.6
Q ss_pred ceEEEEecCCCCEEEEe-cCC----CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC-----------Ce
Q psy1859 70 PVNAISFHQEYNTFATG-GSD----GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD-----------GY 132 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~-~~d----~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d-----------~~ 132 (162)
.+....++|++++++.+ +.. ..++++|+.+++.+...-. ......+ |.++++.|+....+ ..
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~-~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIE-NPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEE-EEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccc-ccccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 45678899999887754 232 4699999999876543211 1222237 99998876665422 24
Q ss_pred EEEEeCCCcee--eeeeccCCCc--eeEEEecCC
Q psy1859 133 VNIWDGFNKKR--LCQFHRYDTG--ITSLCFSYD 162 (162)
Q Consensus 133 i~iwd~~~~~~--~~~~~~~~~~--v~~v~~~pd 162 (162)
|+.|++.++.. ...+...... ...+..++|
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d 237 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKD 237 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TT
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEEEecCc
Confidence 78888876542 2333332222 345555554
No 389
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=95.79 E-value=0.33 Score=32.42 Aligned_cols=119 Identities=8% Similarity=0.061 Sum_probs=66.5
Q ss_pred eeccccccEEEEEEeeCCCeE-EEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 8 RESSLKFQTRCIKCFPNKQGY-VLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l-~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
....+...++.|+|+|+.+.| ++....+.|.. ++... .....+.+.+.. -..+|++..++.++++.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~e--ls~~G-~vlr~i~l~g~~----------D~EgI~y~g~~~~vl~~ 82 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYE--LSLDG-KVLRRIPLDGFG----------DYEGITYLGNGRYVLSE 82 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEE--EETT---EEEEEE-SS-S----------SEEEEEE-STTEEEEEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEE--EcCCC-CEEEEEeCCCCC----------CceeEEEECCCEEEEEE
Confidence 344555668999999986654 45555555544 66432 222333333322 37788888777777777
Q ss_pred cCCCeEEEEeCCCcc------ceeeee-----ecccceeEE-EcCCCCEEEEecCCCeEEEEeCC
Q psy1859 87 GSDGYVNIWDGFNKK------RLCQFH-----RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~------~~~~~~-----~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~ 139 (162)
-.++.+.++++.... ....+. ..+..+-.+ |+|.++.|+.+.+.....++.++
T Consensus 83 Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~ 147 (248)
T PF06977_consen 83 ERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVN 147 (248)
T ss_dssp TTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred cCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEc
Confidence 778999999884421 111221 234457788 99987777777766666666654
No 390
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=95.73 E-value=0.12 Score=38.46 Aligned_cols=70 Identities=13% Similarity=0.067 Sum_probs=42.0
Q ss_pred CCCCEEEEecCCCeEEEEeCCC----ccceee-----------eee-----------cccceeEE-EcC----CCCEEEE
Q psy1859 78 QEYNTFATGGSDGYVNIWDGFN----KKRLCQ-----------FHR-----------YDTGITSL-FHQ----EYNTFAT 126 (162)
Q Consensus 78 p~~~~l~~~~~d~~v~~wd~~~----~~~~~~-----------~~~-----------~~~~v~~~-~~~----~~~~l~~ 126 (162)
++...++.+..||.+....... +..... +.+ ....+..+ ++. +..++++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 4556777788888888776654 111110 000 01223334 555 6789999
Q ss_pred ecCCCeEEEEeCCCceeeeee
Q psy1859 127 GGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 127 ~~~d~~i~iwd~~~~~~~~~~ 147 (162)
.+.|+.+|+||+.+++++.+.
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEe
Confidence 999999999999999986654
No 391
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=95.66 E-value=0.44 Score=32.98 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=66.7
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
....++.+.+++-. ++ +++++ .++.+.+|+++..+ +.... ..... ...+.++... +++++.|..
T Consensus 84 ~~~~~g~V~ai~~~-~~-~lv~~-~g~~l~v~~l~~~~---~l~~~-~~~~~-------~~~i~sl~~~--~~~I~vgD~ 147 (321)
T PF03178_consen 84 STEVKGPVTAICSF-NG-RLVVA-VGNKLYVYDLDNSK---TLLKK-AFYDS-------PFYITSLSVF--KNYILVGDA 147 (321)
T ss_dssp EEEESS-EEEEEEE-TT-EEEEE-ETTEEEEEEEETTS---SEEEE-EEE-B-------SSSEEEEEEE--TTEEEEEES
T ss_pred EEeecCcceEhhhh-CC-EEEEe-ecCEEEEEEccCcc---cchhh-heecc-------eEEEEEEecc--ccEEEEEEc
Confidence 45567888887766 33 44443 34889998887654 11111 11111 0135555544 568999988
Q ss_pred CCeEEEEeCCC-ccceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEEEeCC
Q psy1859 89 DGYVNIWDGFN-KKRLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 89 d~~v~~wd~~~-~~~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~ 139 (162)
...+.++..+. ...+..+.. ....++++ |-++++.++.++.+|.+.++...
T Consensus 148 ~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 148 MKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp SSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred ccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 88888775443 222333322 24457777 66555799999999999998765
No 392
>KOG2247|consensus
Probab=95.65 E-value=0.0013 Score=46.98 Aligned_cols=128 Identities=12% Similarity=0.163 Sum_probs=84.2
Q ss_pred EEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEEEEe
Q psy1859 18 CIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIWD 96 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~wd 96 (162)
...|-|.+..++.+..+-.+.. +|... +......... ....++|..++ ..++.+...+.+.+||
T Consensus 39 ~~~w~~e~~nlavaca~tiv~~--YD~ag---q~~le~n~tg----------~aldm~wDkegdvlavlAek~~piylwd 103 (615)
T KOG2247|consen 39 IHRWRPEGHNLAVACANTIVIY--YDKAG---QVILELNPTG----------KALDMAWDKEGDVLAVLAEKTGPIYLWD 103 (615)
T ss_pred eeeEecCCCceehhhhhhHHHh--hhhhc---ceecccCCch----------hHhhhhhccccchhhhhhhcCCCeeech
Confidence 3557787777888777776666 55432 2222211111 46788898887 4555667889999999
Q ss_pred CCCccceeeeeecccceeE-E-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 97 GFNKKRLCQFHRYDTGITS-L-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 97 ~~~~~~~~~~~~~~~~v~~-~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+.+.... .+........+ + |++-+..++.+...+.+.||+-.+.+.+-+.-.|...+++++|.+
T Consensus 104 ~n~eytq-qLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~l 169 (615)
T KOG2247|consen 104 VNSEYTQ-QLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTL 169 (615)
T ss_pred hhhhhHH-HHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecc
Confidence 9865322 22222222223 3 999888999999999999999887765554434777888888765
No 393
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=95.59 E-value=0.43 Score=35.17 Aligned_cols=62 Identities=19% Similarity=0.180 Sum_probs=42.4
Q ss_pred CCCeEEEEeCCCccceeeeeecc--------cceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYD--------TGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~--------~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
.+|.+.-.|+.+++.+.+..... .....- ..-.+..+++++.||.|+.+|.++|+.+.+++.
T Consensus 364 ~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 364 GKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred CceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 46788888888887766554320 111111 112567899999999999999999998877653
No 394
>KOG1916|consensus
Probab=95.41 E-value=0.03 Score=43.38 Aligned_cols=134 Identities=14% Similarity=0.092 Sum_probs=74.0
Q ss_pred ccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC---CCCEEEE
Q psy1859 10 SSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ---EYNTFAT 85 (162)
Q Consensus 10 ~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~l~~ 85 (162)
..+.|.+..+.|-. +...+. -.-|.+.||+.|.-.++..+.+.+...... + ..+.-+.|.| +.-++..
T Consensus 129 kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~--g----s~~~~V~wcp~~~~~~~ic~ 200 (1283)
T KOG1916|consen 129 KGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPY--G----SDPQLVSWCPIAVNKVYICY 200 (1283)
T ss_pred hcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcC--C----CCcceeeecccccccceeee
Confidence 34555666666543 222222 333778888888755333322222211110 1 1234555555 4566777
Q ss_pred ecCCCeEEEEeCCCccceeeeeeccc----------ceeEE--EcCCCCEEEEecCCCeEEEEeCC-Cc----eeeeeec
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQFHRYDT----------GITSL--FHQEYNTFATGGSDGYVNIWDGF-NK----KRLCQFH 148 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~~~~~~----------~v~~~--~~~~~~~l~~~~~d~~i~iwd~~-~~----~~~~~~~ 148 (162)
+..++.+++........ ..+..|.. .+..+ .+|||..+++++.||.++.|.+. +| .+++.++
T Consensus 201 ~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewk 279 (1283)
T KOG1916|consen 201 GLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWK 279 (1283)
T ss_pred ccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccC
Confidence 77888888766654321 22223433 23333 78999999999999988888653 23 3555566
Q ss_pred cCCC
Q psy1859 149 RYDT 152 (162)
Q Consensus 149 ~~~~ 152 (162)
.|..
T Consensus 280 phd~ 283 (1283)
T KOG1916|consen 280 PHDK 283 (1283)
T ss_pred CCCC
Confidence 6653
No 395
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.27 E-value=0.73 Score=33.08 Aligned_cols=113 Identities=12% Similarity=0.023 Sum_probs=63.6
Q ss_pred EEEEEeeCCCeEEEE-cCCCc--EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC-----
Q psy1859 17 RCIKCFPNKQGYVLS-SIEGR--AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS----- 88 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~-~~~g~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~----- 88 (162)
...+++|++++++.+ +..|. ..++.+|..+ .+.+.. ..... ....+.|.+++..|+....
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~t--g~~l~d-~i~~~---------~~~~~~W~~d~~~~~y~~~~~~~~ 194 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLET--GKFLPD-GIENP---------KFSSVSWSDDGKGFFYTRFDEDQR 194 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTT--TEEEEE-EEEEE---------ESEEEEECTTSSEEEEEECSTTTS
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCC--CcCcCC-ccccc---------ccceEEEeCCCCEEEEEEeCcccc
Confidence 356789999998876 33332 3444477665 222211 11111 1234999999876654432
Q ss_pred ------CCeEEEEeCCCccce--eeeeecccc--eeEE-EcCCCCEEEEec---CC-CeEEEEeCCCc
Q psy1859 89 ------DGYVNIWDGFNKKRL--CQFHRYDTG--ITSL-FHQEYNTFATGG---SD-GYVNIWDGFNK 141 (162)
Q Consensus 89 ------d~~v~~wd~~~~~~~--~~~~~~~~~--v~~~-~~~~~~~l~~~~---~d-~~i~iwd~~~~ 141 (162)
...|+.|.+.+...- ..+...... ...+ .++++++++... .+ ..+.+.|+..+
T Consensus 195 ~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 195 TSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp S-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred cccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 334788888765332 333333333 4456 899999877643 23 46888888764
No 396
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.22 E-value=0.69 Score=32.54 Aligned_cols=141 Identities=15% Similarity=0.095 Sum_probs=70.7
Q ss_pred cccEEEEEEeeCCCeEEEE--cCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEec-CCC-CEEEEec
Q psy1859 13 KFQTRCIKCFPNKQGYVLS--SIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFH-QEY-NTFATGG 87 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~--~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~-~~l~~~~ 87 (162)
...+..+.|.++++.++.. ..+ ....+..+|...+..+.+..-.... -...-....|. +++ .++....
T Consensus 183 ~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~-------Wv~~~~~~~~~~~~~~~~l~~s~ 255 (353)
T PF00930_consen 183 DYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDG-------WVDVYDPPHFLGPDGNEFLWISE 255 (353)
T ss_dssp SEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSS-------SSSSSSEEEE-TTTSSEEEEEEE
T ss_pred ccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCc-------ceeeecccccccCCCCEEEEEEE
Confidence 4556788999998844433 333 3344555666543333333211111 00122244443 666 4444555
Q ss_pred CCCeEEE--EeCCCccceeeeeecccceeEE--EcCCCCEE-EEecCCC----eEEEEeCC-CceeeeeeccCCCceeEE
Q psy1859 88 SDGYVNI--WDGFNKKRLCQFHRYDTGITSL--FHQEYNTF-ATGGSDG----YVNIWDGF-NKKRLCQFHRYDTGITSL 157 (162)
Q Consensus 88 ~d~~v~~--wd~~~~~~~~~~~~~~~~v~~~--~~~~~~~l-~~~~~d~----~i~iwd~~-~~~~~~~~~~~~~~v~~v 157 (162)
.+|.-+| ++...+. ...+....-.|..+ ++++++.+ +++..++ .|..-++. .+. +..+......-..+
T Consensus 256 ~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~-~~~LT~~~~~~~~~ 333 (353)
T PF00930_consen 256 RDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGE-PKCLTCEDGDHYSA 333 (353)
T ss_dssp TTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTE-EEESSTTSSTTEEE
T ss_pred cCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCC-eEeccCCCCCceEE
Confidence 7765554 4554443 44555555667666 88877654 4555432 45555666 444 44444333322588
Q ss_pred EecCC
Q psy1859 158 CFSYD 162 (162)
Q Consensus 158 ~~~pd 162 (162)
.||||
T Consensus 334 ~~Spd 338 (353)
T PF00930_consen 334 SFSPD 338 (353)
T ss_dssp EE-TT
T ss_pred EECCC
Confidence 99986
No 397
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=95.12 E-value=0.84 Score=32.95 Aligned_cols=32 Identities=22% Similarity=-0.027 Sum_probs=26.6
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCC
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTG 45 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~ 45 (162)
+++..++.||++++++.-+.+|.+.+..-|..
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~ 248 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFS 248 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECccc
Confidence 57889999999999999999999888655543
No 398
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=95.10 E-value=0.8 Score=32.59 Aligned_cols=130 Identities=8% Similarity=-0.066 Sum_probs=63.0
Q ss_pred EEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCC
Q psy1859 20 KCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGF 98 (162)
Q Consensus 20 ~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~ 98 (162)
+|.++|+.|+.+ ..+|.-.+|.+|..+.... .+...... ......++|+.+.++-...+..|+-.|++
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~---QLTdg~g~--------~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~ 110 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEIT---QLTDGPGD--------NTFGGFLSPDDRALYYVKNGRSLRRVDLD 110 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEE---E---SS-B---------TTT-EE-TTSSEEEEEETTTEEEEEETT
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEE---ECccCCCC--------CccceEEecCCCeEEEEECCCeEEEEECC
Confidence 466788766554 5578878888888763222 22222110 12245567888777666566788888998
Q ss_pred CccceeeeeecccceeEE-E--cCCCCEEEEec---C-------------------CCeEEEEeCCCceeeeeeccCCCc
Q psy1859 99 NKKRLCQFHRYDTGITSL-F--HQEYNTFATGG---S-------------------DGYVNIWDGFNKKRLCQFHRYDTG 153 (162)
Q Consensus 99 ~~~~~~~~~~~~~~v~~~-~--~~~~~~l~~~~---~-------------------d~~i~iwd~~~~~~~~~~~~~~~~ 153 (162)
+.+....+......+... | +.|+..++-.- . ...|.--|+++|+.-..+. -...
T Consensus 111 T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~w 189 (386)
T PF14583_consen 111 TLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDW 189 (386)
T ss_dssp T--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-
T ss_pred cCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCcc
Confidence 876544444344444333 3 34565544331 1 2245666777776543333 3445
Q ss_pred eeEEEecC
Q psy1859 154 ITSLCFSY 161 (162)
Q Consensus 154 v~~v~~~p 161 (162)
+..+.|+|
T Consensus 190 lgH~~fsP 197 (386)
T PF14583_consen 190 LGHVQFSP 197 (386)
T ss_dssp EEEEEEET
T ss_pred ccCcccCC
Confidence 66677766
No 399
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=95.09 E-value=0.87 Score=32.96 Aligned_cols=89 Identities=10% Similarity=0.064 Sum_probs=46.4
Q ss_pred EEEecCCCCEEEEec--C----CCeEEEEeCCCccceeeeeecc---cceeEE-EcCCCCEEEEecC-------------
Q psy1859 73 AISFHQEYNTFATGG--S----DGYVNIWDGFNKKRLCQFHRYD---TGITSL-FHQEYNTFATGGS------------- 129 (162)
Q Consensus 73 ~~~~~p~~~~l~~~~--~----d~~v~~wd~~~~~~~~~~~~~~---~~v~~~-~~~~~~~l~~~~~------------- 129 (162)
.+..-|+|+.++++- . -|-+.+.|-++.+......... ..-+.+ |.|..+.++++..
T Consensus 134 T~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~ 213 (461)
T PF05694_consen 134 TVHCLPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPE 213 (461)
T ss_dssp EEEE-SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TT
T ss_pred eeeecCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChh
Confidence 344457888888752 2 2567788877655555544322 234456 8888888888743
Q ss_pred -------CCeEEEEeCCCceeeeeeccCCC--ceeEEEecC
Q psy1859 130 -------DGYVNIWDGFNKKRLCQFHRYDT--GITSLCFSY 161 (162)
Q Consensus 130 -------d~~i~iwd~~~~~~~~~~~~~~~--~v~~v~~~p 161 (162)
...+.+||+.+.+.++++..... -+..|.|..
T Consensus 214 d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH 254 (461)
T PF05694_consen 214 DLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLH 254 (461)
T ss_dssp THHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-S
T ss_pred HhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecC
Confidence 34899999999999888864332 244566543
No 400
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=95.05 E-value=0.71 Score=34.54 Aligned_cols=37 Identities=14% Similarity=0.159 Sum_probs=27.6
Q ss_pred ceEEEEecC----CCCEEEEecCCCeEEEEeCCCccceeee
Q psy1859 70 PVNAISFHQ----EYNTFATGGSDGYVNIWDGFNKKRLCQF 106 (162)
Q Consensus 70 ~v~~~~~~p----~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 106 (162)
.+.++++++ +..++++.+.|+.+++||+.+++++...
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 455666666 5688999999999999999998885543
No 401
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=94.52 E-value=1.2 Score=32.95 Aligned_cols=68 Identities=19% Similarity=0.142 Sum_probs=45.4
Q ss_pred CEEEEecCCCeEEEEeCCCccceeeeeecccc--eeEE-EcC--CCCEEEEec---------CCCeEEEEeCCCceeeee
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTG--ITSL-FHQ--EYNTFATGG---------SDGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~--v~~~-~~~--~~~~l~~~~---------~d~~i~iwd~~~~~~~~~ 146 (162)
..++.++.++.|.-+|.++++.+.++...... -..+ -+| .+..++.++ .++.+.-+|..+|+.+.+
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 57777888999999999999888766533221 0111 122 224455553 367899999999988777
Q ss_pred ec
Q psy1859 147 FH 148 (162)
Q Consensus 147 ~~ 148 (162)
+.
T Consensus 191 ~~ 192 (488)
T cd00216 191 FY 192 (488)
T ss_pred ee
Confidence 64
No 402
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.52 E-value=1.8 Score=33.77 Aligned_cols=72 Identities=18% Similarity=0.139 Sum_probs=49.2
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCC---------Cccc---eeeee--------ecccceeEE-EcCC---CCEEE
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGF---------NKKR---LCQFH--------RYDTGITSL-FHQE---YNTFA 125 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~---------~~~~---~~~~~--------~~~~~v~~~-~~~~---~~~l~ 125 (162)
.|..+.++|+|.+++..+..|...+.=.+ .++. ++.+. .....+..+ |+|. +..|+
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~ 165 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLV 165 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEE
Confidence 68899999999988888776654443222 1111 11111 223466777 9995 57899
Q ss_pred EecCCCeEEEEeCCCc
Q psy1859 126 TGGSDGYVNIWDGFNK 141 (162)
Q Consensus 126 ~~~~d~~i~iwd~~~~ 141 (162)
+-..|+.+++||+...
T Consensus 166 vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 166 VLTSDNTLRLYDISDP 181 (717)
T ss_pred EEecCCEEEEEecCCC
Confidence 9999999999999754
No 403
>PHA02713 hypothetical protein; Provisional
Probab=94.52 E-value=0.34 Score=36.39 Aligned_cols=73 Identities=1% Similarity=0.025 Sum_probs=43.4
Q ss_pred CCCEEEEecCC------CeEEEEeCCC-ccc--eeeeeecccceeEEEcCCCCEEEEecCCC--eEEEEeCCCceeeeee
Q psy1859 79 EYNTFATGGSD------GYVNIWDGFN-KKR--LCQFHRYDTGITSLFHQEYNTFATGGSDG--YVNIWDGFNKKRLCQF 147 (162)
Q Consensus 79 ~~~~l~~~~~d------~~v~~wd~~~-~~~--~~~~~~~~~~v~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~ 147 (162)
++++.+.|+.+ ..+..||..+ .+. +..+.........+ .-++++.++|+.++ .+-.||..+.+-....
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~-~~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~ 541 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTI-LHDNTIMMLHCYESYMLQDTFNVYTYEWNHIC 541 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeE-EECCEEEEEeeecceeehhhcCcccccccchh
Confidence 36677777654 2467899886 333 33333222222222 22688889998887 7888898887654444
Q ss_pred ccCCC
Q psy1859 148 HRYDT 152 (162)
Q Consensus 148 ~~~~~ 152 (162)
..|..
T Consensus 542 ~~~~~ 546 (557)
T PHA02713 542 HQHSN 546 (557)
T ss_pred hhcCC
Confidence 44543
No 404
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=94.48 E-value=1.9 Score=33.91 Aligned_cols=68 Identities=15% Similarity=0.068 Sum_probs=46.3
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeecccce-------------eEE-EcC--CCCEEEEecC----------CCeE
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGI-------------TSL-FHQ--EYNTFATGGS----------DGYV 133 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v-------------~~~-~~~--~~~~l~~~~~----------d~~i 133 (162)
+..++.++.|+.+.-.|.++|+.+..+... +.+ ..+ -.| .+..+++|+. +|.|
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~-G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I 338 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFGNN-GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI 338 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEecCC-CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence 347788889999999999999888765321 111 011 122 2345666642 6889
Q ss_pred EEEeCCCceeeeeec
Q psy1859 134 NIWDGFNKKRLCQFH 148 (162)
Q Consensus 134 ~iwd~~~~~~~~~~~ 148 (162)
+-+|.++|+.+..+.
T Consensus 339 ~A~Da~TGkl~W~~~ 353 (764)
T TIGR03074 339 RAFDVNTGALVWAWD 353 (764)
T ss_pred EEEECCCCcEeeEEe
Confidence 999999999888764
No 405
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.42 E-value=0.96 Score=30.31 Aligned_cols=90 Identities=11% Similarity=0.029 Sum_probs=53.8
Q ss_pred ceEEEEecCCCCEEEEec---CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEe-CCCceee
Q psy1859 70 PVNAISFHQEYNTFATGG---SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWD-GFNKKRL 144 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~---~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd-~~~~~~~ 144 (162)
.+.+.++++++..++... ....++++.. +....... ....+... |++++...+....+...+++. ..++...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 488999999998776655 3344555543 33333222 22355566 999987777766666666663 3333321
Q ss_pred -eeeccC--CCceeEEEecCC
Q psy1859 145 -CQFHRY--DTGITSLCFSYD 162 (162)
Q Consensus 145 -~~~~~~--~~~v~~v~~~pd 162 (162)
...... ...|.++.+|||
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpD 122 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPD 122 (253)
T ss_pred eEEecccccCCceEEEEECCC
Confidence 112211 127999999997
No 406
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.34 E-value=0.88 Score=29.79 Aligned_cols=85 Identities=9% Similarity=-0.126 Sum_probs=50.1
Q ss_pred EEEEeeCCCeEEEEcCCCcEEEEEecCCccccee--eeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 18 CIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKM--KYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
.+....+++++++.+.+|.+++|++...+..... +..+-.... .........|..+.++.+|.-+++-+ +|..+.|
T Consensus 15 ~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~-~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y 92 (219)
T PF07569_consen 15 VSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSP-VSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSY 92 (219)
T ss_pred eEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccc-cccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEe
Confidence 3445667889999999999999776554311111 000000000 00002333688999998887666654 5778899
Q ss_pred eCCCcccee
Q psy1859 96 DGFNKKRLC 104 (162)
Q Consensus 96 d~~~~~~~~ 104 (162)
+..-+..+.
T Consensus 93 ~~~L~~W~~ 101 (219)
T PF07569_consen 93 SPDLGCWIR 101 (219)
T ss_pred ccccceeEE
Confidence 877655444
No 407
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=94.25 E-value=1.6 Score=32.47 Aligned_cols=98 Identities=15% Similarity=0.126 Sum_probs=53.5
Q ss_pred EEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-------CEEEEecCCCeEEEEeCCC-
Q psy1859 28 YVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-------NTFATGGSDGYVNIWDGFN- 99 (162)
Q Consensus 28 l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-------~~l~~~~~d~~v~~wd~~~- 99 (162)
|+.......-++|..|... .+.+-....+.. | .+.|.|.. ..-+.|-.+..|.-.|.+-
T Consensus 481 li~~dg~~~~kLykmDIEr--GkvveeW~~~dd----------v-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~ 547 (776)
T COG5167 481 LIYLDGGERDKLYKMDIER--GKVVEEWDLKDD----------V-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRAR 547 (776)
T ss_pred eEEecCCCcccceeeeccc--ceeeeEeecCCc----------c-eeecCCchhHHhcCccceEEeecccceEEeccccc
Confidence 3333344444566677766 444443333332 4 67777752 1234555566666666664
Q ss_pred ccceeeeeecccceeEE-EcC----CCCEEEEecCCCeEEEEeCC
Q psy1859 100 KKRLCQFHRYDTGITSL-FHQ----EYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 100 ~~~~~~~~~~~~~v~~~-~~~----~~~~l~~~~~d~~i~iwd~~ 139 (162)
|..+... ......+.- |+. ...++++++..|-|++||--
T Consensus 548 gNKi~v~-esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRi 591 (776)
T COG5167 548 GNKIKVV-ESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRI 591 (776)
T ss_pred CCceeee-eehhccccccccccccccCceEEEecCCCceeeehhh
Confidence 3222222 122233322 333 56699999999999999954
No 408
>KOG1916|consensus
Probab=94.25 E-value=0.13 Score=40.21 Aligned_cols=131 Identities=15% Similarity=0.155 Sum_probs=70.9
Q ss_pred eccccccEEEEEEee---CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCccc--ceeceEEEEecCCCCEE
Q psy1859 9 ESSLKFQTRCIKCFP---NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIE--KIYPVNAISFHQEYNTF 83 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~---~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~l 83 (162)
..+......-+.|.| +.-++.++..++++++..|+... .. .+..|.......+ ..+.+.--..+|||..|
T Consensus 176 ~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~--~~---l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~ 250 (1283)
T KOG1916|consen 176 ITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRAL--RS---LFRSHSQRVTDMAFFAEGVLKLASLSPDGTVF 250 (1283)
T ss_pred cCcCCCCcceeeecccccccceeeeccCCCceeEeeechHH--HH---HHHhcCCCcccHHHHhhchhhheeeCCCCcEE
Confidence 333334445566665 45667777888999997776543 21 1222332100000 00011112269999999
Q ss_pred EEecCCCeEEEEeCCC-----ccceeeeeeccccee-EE-EcCC---------CCEEEEec-CCCeEEEEeCCCceee
Q psy1859 84 ATGGSDGYVNIWDGFN-----KKRLCQFHRYDTGIT-SL-FHQE---------YNTFATGG-SDGYVNIWDGFNKKRL 144 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~-----~~~~~~~~~~~~~v~-~~-~~~~---------~~~l~~~~-~d~~i~iwd~~~~~~~ 144 (162)
+....||.+..|.+.- ..++...+.|.+... |. ++.+ -.++++++ .+..+++|....-+|+
T Consensus 251 a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 251 AWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred EEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 9999999888886642 234455555553222 22 3321 12455554 3456899987655554
No 409
>KOG2444|consensus
Probab=94.00 E-value=0.56 Score=30.72 Aligned_cols=72 Identities=15% Similarity=0.066 Sum_probs=45.9
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeec-ccceeEE--EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRY-DTGITSL--FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD 151 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~-~~~v~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 151 (162)
+..++.|+.+|.|.+|+...........+. ...+.++ --.++.+..+++.|+.|+.|++.-.+.+...-.|.
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~ 144 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHN 144 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeecccc
Confidence 467889999999999987742222222221 1222222 22355688999999999999998766555444444
No 410
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=93.88 E-value=1.5 Score=30.43 Aligned_cols=88 Identities=23% Similarity=0.139 Sum_probs=47.8
Q ss_pred eceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeeccc--ceeEEEcCCCCEEEEecCCCeEEEEeCCC-ceeee
Q psy1859 69 YPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT--GITSLFHQEYNTFATGGSDGYVNIWDGFN-KKRLC 145 (162)
Q Consensus 69 ~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~--~v~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~ 145 (162)
++|+++.-- ++. ++++ .++.|.+|++...+.+.....+.. .+.++ ...+.+++.|+....+.++..+. +..+.
T Consensus 89 g~V~ai~~~-~~~-lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl-~~~~~~I~vgD~~~sv~~~~~~~~~~~l~ 164 (321)
T PF03178_consen 89 GPVTAICSF-NGR-LVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSL-SVFKNYILVGDAMKSVSLLRYDEENNKLI 164 (321)
T ss_dssp S-EEEEEEE-TTE-EEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEE-EEETTEEEEEESSSSEEEEEEETTTE-EE
T ss_pred CcceEhhhh-CCE-EEEe-ecCEEEEEEccCcccchhhheecceEEEEEE-eccccEEEEEEcccCEEEEEEEccCCEEE
Confidence 378888766 334 4333 358899999987762222222223 44444 33466999998888787774432 22222
Q ss_pred eec--cCCCceeEEEec
Q psy1859 146 QFH--RYDTGITSLCFS 160 (162)
Q Consensus 146 ~~~--~~~~~v~~v~~~ 160 (162)
.+. .....++++.|-
T Consensus 165 ~va~d~~~~~v~~~~~l 181 (321)
T PF03178_consen 165 LVARDYQPRWVTAAEFL 181 (321)
T ss_dssp EEEEESS-BEEEEEEEE
T ss_pred EEEecCCCccEEEEEEe
Confidence 221 223456666664
No 411
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.72 E-value=1.5 Score=30.05 Aligned_cols=72 Identities=4% Similarity=-0.043 Sum_probs=52.7
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeec-ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY-DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~-~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
-+.++.|+|+.+.|.+......-.++=...|+.+.++.-. -.....+ +..+++++++--.++.+.++.+...
T Consensus 87 nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 87 NVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred cccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 4899999999988888877777777766678888877532 2223345 6667778888778888888877644
No 412
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=93.70 E-value=1.7 Score=30.46 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=51.0
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC----CCEEEEecCC--
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE----YNTFATGGSD-- 89 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~l~~~~~d-- 89 (162)
-..|+|.|+++.|++ ...|.|.++. ........+..+. . ...........++++|+ +.+.++.+..
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~--~~g~~~~~v~~~~--~---v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~ 75 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVD--KDGSLKTPVADLP--E---VFADGERGLLGIAFHPDFASNGYLYVYYTNADE 75 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEE--TTTEECEEEEE-T--T---TBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-T
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEe--CCCcCcceecccc--c---ccccccCCcccceeccccCCCCEEEEEEEcccC
Confidence 468999999877665 5689988844 2221111221111 0 01112236899999995 4444444321
Q ss_pred ------CeEEEEeCCCc-------cce-eeeee---cccceeEE-EcCCCCEEEEecC
Q psy1859 90 ------GYVNIWDGFNK-------KRL-CQFHR---YDTGITSL-FHQEYNTFATGGS 129 (162)
Q Consensus 90 ------~~v~~wd~~~~-------~~~-~~~~~---~~~~v~~~-~~~~~~~l~~~~~ 129 (162)
..|.-|..... +.+ ..+.. .......+ |.|||.+.++.+.
T Consensus 76 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~ 133 (331)
T PF07995_consen 76 DGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGD 133 (331)
T ss_dssp SSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-
T ss_pred CCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCC
Confidence 23444444322 111 11122 12334457 9999976666554
No 413
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=93.64 E-value=1.5 Score=29.63 Aligned_cols=118 Identities=9% Similarity=0.042 Sum_probs=70.1
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEe
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWD 96 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd 96 (162)
..+.+..++.++-+++.-|.=.|..++..++.......+...- .-..+.... +++..-.-.++...+||
T Consensus 48 QGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~----------FgEGit~~~-d~l~qLTWk~~~~f~yd 116 (264)
T PF05096_consen 48 QGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRY----------FGEGITILG-DKLYQLTWKEGTGFVYD 116 (264)
T ss_dssp EEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT------------EEEEEEET-TEEEEEESSSSEEEEEE
T ss_pred ccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccc----------cceeEEEEC-CEEEEEEecCCeEEEEc
Confidence 3466767777777888778666666777663222222222111 223444432 34555566889999999
Q ss_pred CCCccceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy1859 97 GFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 97 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
..+-+.+.++.-. +.-..+ ..+++.|+.++....|+++|..+.+...++
T Consensus 117 ~~tl~~~~~~~y~-~EGWGL-t~dg~~Li~SDGS~~L~~~dP~~f~~~~~i 165 (264)
T PF05096_consen 117 PNTLKKIGTFPYP-GEGWGL-TSDGKRLIMSDGSSRLYFLDPETFKEVRTI 165 (264)
T ss_dssp TTTTEEEEEEE-S-SS--EE-EECSSCEEEE-SSSEEEEE-TTT-SEEEEE
T ss_pred cccceEEEEEecC-CcceEE-EcCCCEEEEECCccceEEECCcccceEEEE
Confidence 9988777776532 222222 347888888888889999998876554444
No 414
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=93.58 E-value=1.2 Score=33.37 Aligned_cols=60 Identities=17% Similarity=0.254 Sum_probs=39.5
Q ss_pred CeEEEEeCCCccceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
+.|.-+|+.+++...+.............-.+.+++.++.+|.++.+|.++|+.+..++.
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 457777777776665544221111111122456778888899999999999998887754
No 415
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=93.49 E-value=1.7 Score=30.00 Aligned_cols=67 Identities=16% Similarity=0.231 Sum_probs=42.5
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEe
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWD 137 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd 137 (162)
.+..+.-+++|.+++++.....+.-||.-.......-......+..+ |.|++.+.+++ ..|.|+.=+
T Consensus 146 s~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 146 SINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp -EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred eeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 57888889999999888877777788865432222222345778899 99998877765 888888877
No 416
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=93.36 E-value=2.6 Score=31.64 Aligned_cols=67 Identities=21% Similarity=0.128 Sum_probs=44.1
Q ss_pred CEEEEecCCCeEEEEeCCCccceeeeeecc----cceeEE-EcCCCCEEEEec------CCCeEEEEeCCCceeeeeec
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKRLCQFHRYD----TGITSL-FHQEYNTFATGG------SDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~----~~v~~~-~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~ 148 (162)
..++.++.|+.+.-.|.++|+.+....... ..+++. .--++ .++++. .+|.|.-+|.++|+.+.++.
T Consensus 121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 456778889999999999998876654211 112221 11134 444443 26899999999999887654
No 417
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=93.36 E-value=1 Score=34.70 Aligned_cols=123 Identities=11% Similarity=0.019 Sum_probs=67.5
Q ss_pred EEEEEEee--CCCeEEEEcCCCcEEEEEecCC-----cccceeee-eeeeeeeccCcccceeceEEEEec--CCCCEEEE
Q psy1859 16 TRCIKCFP--NKQGYVLSSIEGRAAVEYLDTG-----PEMQKMKY-AFKCHRIKEDGIEKIYPVNAISFH--QEYNTFAT 85 (162)
Q Consensus 16 ~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~--p~~~~l~~ 85 (162)
|..|.... ....|++|.+||.|.+|..+.- ........ .................+.+++++ ...+++|+
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAV 182 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAV 182 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEE
Confidence 44444333 3567888999999999754210 00000000 000000000111123368899998 77789999
Q ss_pred ecCCCeEEEEeCCCc--ccee-eeeecccceeEE-EcC-----CCC-EEEEecCCCeEEEEeC
Q psy1859 86 GGSDGYVNIWDGFNK--KRLC-QFHRYDTGITSL-FHQ-----EYN-TFATGGSDGYVNIWDG 138 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~--~~~~-~~~~~~~~v~~~-~~~-----~~~-~l~~~~~d~~i~iwd~ 138 (162)
++....|.||-.... +... .-..+...|-++ |-+ +|. ++++++-.|.+.+|++
T Consensus 183 SsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 183 SSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 998888888755432 1111 011234456666 554 232 7888888999888877
No 418
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=93.31 E-value=2.1 Score=31.12 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=19.6
Q ss_pred cceeEE-EcCCCCEEEEec-CCCeEEEEeCCCc
Q psy1859 111 TGITSL-FHQEYNTFATGG-SDGYVNIWDGFNK 141 (162)
Q Consensus 111 ~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~~~ 141 (162)
.-++.+ +|.|.++|..++ .+|.|+.||+...
T Consensus 312 ~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 312 PLITDILISLDDRFLYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp -----EEE-TTS-EEEEEETTTTEEEEEE-SST
T ss_pred CceEeEEEccCCCEEEEEcccCCcEEEEecCCC
Confidence 446888 999999988877 6899999999753
No 419
>KOG1897|consensus
Probab=93.17 E-value=3.7 Score=32.92 Aligned_cols=84 Identities=13% Similarity=0.185 Sum_probs=52.1
Q ss_pred ceEEEEecCC-CCEEEEecC----------CCeEEEEeCCCccceeeeee--cccceeEE--EcCCCCEEEEecCCCeEE
Q psy1859 70 PVNAISFHQE-YNTFATGGS----------DGYVNIWDGFNKKRLCQFHR--YDTGITSL--FHQEYNTFATGGSDGYVN 134 (162)
Q Consensus 70 ~v~~~~~~p~-~~~l~~~~~----------d~~v~~wd~~~~~~~~~~~~--~~~~v~~~--~~~~~~~l~~~~~d~~i~ 134 (162)
.+.++.|..+ +.++++|+. .|.|.++.+...+.++.... -.+.+.++ | +|+++|.- ...|+
T Consensus 776 Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f--ngkllA~I--n~~vr 851 (1096)
T KOG1897|consen 776 SIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF--NGKLLAGI--NQSVR 851 (1096)
T ss_pred eeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh--CCeEEEec--CcEEE
Confidence 4666678777 567776643 47888888776444443322 24555555 5 57666554 55899
Q ss_pred EEeCCCceeeeeeccCCCceeEE
Q psy1859 135 IWDGFNKKRLCQFHRYDTGITSL 157 (162)
Q Consensus 135 iwd~~~~~~~~~~~~~~~~v~~v 157 (162)
+|+..+.+.++.-..+..++..+
T Consensus 852 Lye~t~~~eLr~e~~~~~~~~aL 874 (1096)
T KOG1897|consen 852 LYEWTTERELRIECNISNPIIAL 874 (1096)
T ss_pred EEEccccceehhhhcccCCeEEE
Confidence 99998876665554555554443
No 420
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=92.93 E-value=0.37 Score=20.68 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=20.9
Q ss_pred EEEEecCCCeEEEEeCCCceeeeee
Q psy1859 123 TFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 123 ~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
.+++++.++.+..+|.++|+.+.++
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 6788889999999999999877653
No 421
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=92.72 E-value=2.8 Score=30.34 Aligned_cols=82 Identities=12% Similarity=0.083 Sum_probs=50.4
Q ss_pred ecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-CCc
Q psy1859 76 FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY-DTG 153 (162)
Q Consensus 76 ~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~ 153 (162)
++.+....+....++.+.+.+-...+. +. ..+++..+ .||+|++++.-..+|.+.+....-.+.+..+... ...
T Consensus 186 l~~~~~~~i~~~~g~~i~~i~~~~~~~---i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~ 261 (410)
T PF04841_consen 186 LSSDRVVEILLANGETIYIIDENSFKQ---ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSP 261 (410)
T ss_pred eecCcceEEEEecCCEEEEEEcccccc---cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCC
Confidence 334444444444455555443322111 21 24578888 9999999999999999999887655555555433 345
Q ss_pred eeEEEecC
Q psy1859 154 ITSLCFSY 161 (162)
Q Consensus 154 v~~v~~~p 161 (162)
...+.|+.
T Consensus 262 p~~~~WCG 269 (410)
T PF04841_consen 262 PKQMAWCG 269 (410)
T ss_pred CcEEEEEC
Confidence 67777764
No 422
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=92.68 E-value=1.6 Score=27.38 Aligned_cols=30 Identities=13% Similarity=0.130 Sum_probs=25.0
Q ss_pred ceEEEEecCCC------CEEEEecCCCeEEEEeCCC
Q psy1859 70 PVNAISFHQEY------NTFATGGSDGYVNIWDGFN 99 (162)
Q Consensus 70 ~v~~~~~~p~~------~~l~~~~~d~~v~~wd~~~ 99 (162)
.+.+++|||.| .+|++.+.++.|.+|....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 78999999954 3788889999999998663
No 423
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=92.64 E-value=1.3 Score=26.47 Aligned_cols=83 Identities=16% Similarity=0.237 Sum_probs=50.1
Q ss_pred EEecCCCCEEEEecCCCeEEEEeCCCcc--------ceeeeeecccceeEE----EcC--CCCEEEEecCCCeEEEEeCC
Q psy1859 74 ISFHQEYNTFATGGSDGYVNIWDGFNKK--------RLCQFHRYDTGITSL----FHQ--EYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 74 ~~~~p~~~~l~~~~~d~~v~~wd~~~~~--------~~~~~~~~~~~v~~~----~~~--~~~~l~~~~~d~~i~iwd~~ 139 (162)
-.|......|+.++.-++|.+.+..... .+..+ .-...++++ |.| +...|+.|+ ...|..||+.
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~ 81 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVE 81 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcc
Confidence 3455556678888888999999876432 22333 345566666 654 344666665 4578999997
Q ss_pred CceeeeeeccCCCceeEEEe
Q psy1859 140 NKKRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 140 ~~~~~~~~~~~~~~v~~v~~ 159 (162)
...-+- ++.-++.|.++.+
T Consensus 82 ~N~d~F-yke~~DGvn~i~~ 100 (136)
T PF14781_consen 82 NNSDLF-YKEVPDGVNAIVI 100 (136)
T ss_pred cCchhh-hhhCccceeEEEE
Confidence 654332 2223345665554
No 424
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=92.61 E-value=0.8 Score=34.31 Aligned_cols=69 Identities=13% Similarity=0.190 Sum_probs=39.7
Q ss_pred EEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEE-ecCCCeEEEEeC
Q psy1859 19 IKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT-GGSDGYVNIWDG 97 (162)
Q Consensus 19 i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~-~~~d~~v~~wd~ 97 (162)
..|+|....|++-+....-.+......+ .+....++... .|.|..|.+||+.|+. .+..-.-++||-
T Consensus 118 CVWHPk~~iL~VLT~~dvSV~~sV~~d~--srVkaDi~~~G----------~IhCACWT~DG~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 118 CVWHPKKAILTVLTARDVSVLPSVHCDS--SRVKADIKTSG----------LIHCACWTKDGQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred ccccCCCceEEEEecCceeEeeeeeeCC--ceEEEeccCCc----------eEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence 5688877776654443332232222222 33333333333 5999999999965554 455556678986
Q ss_pred CC
Q psy1859 98 FN 99 (162)
Q Consensus 98 ~~ 99 (162)
..
T Consensus 186 ~q 187 (671)
T PF15390_consen 186 AQ 187 (671)
T ss_pred ch
Confidence 54
No 425
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=92.49 E-value=0.51 Score=21.23 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=16.2
Q ss_pred ccceeEE-EcCCCCEEEEec-CC--CeEEEE
Q psy1859 110 DTGITSL-FHQEYNTFATGG-SD--GYVNIW 136 (162)
Q Consensus 110 ~~~v~~~-~~~~~~~l~~~~-~d--~~i~iw 136 (162)
....... |+|||++|+..+ .+ |.-.||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3344555 999999877665 44 555554
No 426
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=92.49 E-value=3.9 Score=31.38 Aligned_cols=90 Identities=17% Similarity=0.090 Sum_probs=57.0
Q ss_pred EEEecCCCCEEEEecCCCeEEEEeCCCccceeeee-ecccceeEE---EcCCCCEEEEecCCCeEEEEeCC-----Cc--
Q psy1859 73 AISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSL---FHQEYNTFATGGSDGYVNIWDGF-----NK-- 141 (162)
Q Consensus 73 ~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~---~~~~~~~l~~~~~d~~i~iwd~~-----~~-- 141 (162)
-+.-+.-++..++-+....+.|||.+.+.....-. .....|.++ ..|+|+.+.+.+....|.++... +.
T Consensus 34 li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p 113 (631)
T PF12234_consen 34 LISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGP 113 (631)
T ss_pred eEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCc
Confidence 34344445555555566789999999876433222 346788888 45699999999999999998642 11
Q ss_pred --eeeeee--ccCC-CceeEEEecCC
Q psy1859 142 --KRLCQF--HRYD-TGITSLCFSYD 162 (162)
Q Consensus 142 --~~~~~~--~~~~-~~v~~v~~~pd 162 (162)
..+..+ ..++ .+|.+..|-+|
T Consensus 114 ~w~~i~~i~i~~~T~h~Igds~Wl~~ 139 (631)
T PF12234_consen 114 SWAPIRKIDISSHTPHPIGDSIWLKD 139 (631)
T ss_pred ccceeEEEEeecCCCCCccceeEecC
Confidence 123222 2333 46777887654
No 427
>PRK10115 protease 2; Provisional
Probab=92.09 E-value=3.6 Score=32.02 Aligned_cols=69 Identities=7% Similarity=-0.086 Sum_probs=46.0
Q ss_pred ceEEEEecCCCCEEEEec-----CCCeEEEEeCCCccceee-eeecccceeEE-EcCCCCEEEEecCC------CeEEEE
Q psy1859 70 PVNAISFHQEYNTFATGG-----SDGYVNIWDGFNKKRLCQ-FHRYDTGITSL-FHQEYNTFATGGSD------GYVNIW 136 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~-----~d~~v~~wd~~~~~~~~~-~~~~~~~v~~~-~~~~~~~l~~~~~d------~~i~iw 136 (162)
.+..+.|+|++++|+.+. ....+++.|+.++..+.. +.. .-..+ |.+|++.|+....+ ..|+.+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~---~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN---VEPSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC---cceEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 577899999998777543 235688889987764322 221 11347 99998866665432 368888
Q ss_pred eCCCc
Q psy1859 137 DGFNK 141 (162)
Q Consensus 137 d~~~~ 141 (162)
++.++
T Consensus 205 ~lgt~ 209 (686)
T PRK10115 205 TIGTP 209 (686)
T ss_pred ECCCC
Confidence 88877
No 428
>KOG4460|consensus
Probab=91.95 E-value=4.1 Score=30.49 Aligned_cols=92 Identities=13% Similarity=0.127 Sum_probs=55.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEE---ecCCc--ccceeeeeeeeeeec-c-CcccceeceEEEEecCCC--
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEY---LDTGP--EMQKMKYAFKCHRIK-E-DGIEKIYPVNAISFHQEY-- 80 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~---~~~~~--~~~~~~~~~~~~~~~-~-~~~~~~~~v~~~~~~p~~-- 80 (162)
......+..+..++.|..++.++.+|.+..+- |.... ...+.....+..... + +-....-.+...+|+|+.
T Consensus 100 ~~V~feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~ 179 (741)
T KOG4460|consen 100 NPVLFEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSIL 179 (741)
T ss_pred CcceEEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccC
Confidence 44556778888999999999999999876643 32211 001111111100000 0 000011147789999985
Q ss_pred -CEEEEecCCCeEEEEeCCCcc
Q psy1859 81 -NTFATGGSDGYVNIWDGFNKK 101 (162)
Q Consensus 81 -~~l~~~~~d~~v~~wd~~~~~ 101 (162)
..+..-+.|..+++||+....
T Consensus 180 D~hL~iL~sdnviRiy~lS~~t 201 (741)
T KOG4460|consen 180 DPHLVLLTSDNVIRIYSLSEPT 201 (741)
T ss_pred CceEEEEecCcEEEEEecCCcc
Confidence 577788889999999997644
No 429
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=91.80 E-value=0.66 Score=21.05 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=22.0
Q ss_pred CCCC-EEEEecCCCeEEEEeCCCccceeeeee
Q psy1859 78 QEYN-TFATGGSDGYVNIWDGFNKKRLCQFHR 108 (162)
Q Consensus 78 p~~~-~l~~~~~d~~v~~wd~~~~~~~~~~~~ 108 (162)
|+++ ++++...++.|.++|..+++.+..+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 4565 444555689999999988877766654
No 430
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=91.53 E-value=0.7 Score=20.80 Aligned_cols=27 Identities=30% Similarity=0.453 Sum_probs=22.8
Q ss_pred EEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 123 TFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 123 ~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
.++.++.+|.|.-.|.++|+.+..++.
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 456668999999999999999888763
No 431
>PHA02713 hypothetical protein; Provisional
Probab=91.48 E-value=3.3 Score=31.34 Aligned_cols=106 Identities=11% Similarity=0.113 Sum_probs=51.1
Q ss_pred eCCCeEEEEcCCCcE---EEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC---------
Q psy1859 23 PNKQGYVLSSIEGRA---AVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG--------- 90 (162)
Q Consensus 23 ~~~~~l~~~~~~g~i---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~--------- 90 (162)
-+++.++.|+.++.. .+..+|+.+..+.....+..... ....+.+ ++.+.+.|+.++
T Consensus 350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~---------~~~~~~~--~g~IYviGG~~~~~~~~~~~~ 418 (557)
T PHA02713 350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALS---------SYGMCVL--DQYIYIIGGRTEHIDYTSVHH 418 (557)
T ss_pred ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccc---------cccEEEE--CCEEEEEeCCCcccccccccc
Confidence 356777777765421 13335655433443333222211 1112222 567777777542
Q ss_pred --------------eEEEEeCCCccce--eeeeecccceeEEEcCCCCEEEEecCC------CeEEEEeCCC
Q psy1859 91 --------------YVNIWDGFNKKRL--CQFHRYDTGITSLFHQEYNTFATGGSD------GYVNIWDGFN 140 (162)
Q Consensus 91 --------------~v~~wd~~~~~~~--~~~~~~~~~v~~~~~~~~~~l~~~~~d------~~i~iwd~~~ 140 (162)
.+..||..+.+.. ..+....... ++..-+++..+.|+.+ ..+..||..+
T Consensus 419 ~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~-~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 419 MNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRP-GVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred cccccccccccccceEEEECCCCCeEeecCCCCcccccC-cEEEECCEEEEEeCCCCCCccceeEEEecCCC
Confidence 4677887765432 2221111111 1112256667777654 2466788876
No 432
>PHA03098 kelch-like protein; Provisional
Probab=91.10 E-value=5.2 Score=29.97 Aligned_cols=63 Identities=14% Similarity=0.124 Sum_probs=33.9
Q ss_pred CCCEEEEecCC-----CeEEEEeCCCcccee--eeeecccceeEEEcCCCCEEEEecCC------CeEEEEeCCCce
Q psy1859 79 EYNTFATGGSD-----GYVNIWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSD------GYVNIWDGFNKK 142 (162)
Q Consensus 79 ~~~~l~~~~~d-----~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~ 142 (162)
++.+++.|+.+ ..+..||..+.+... .+....... ++..-+++..+.|+.+ ..+..||..+++
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~-~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~ 417 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNP-CVVNVNNLIYVIGGISKNDELLKTVECFSLNTNK 417 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccc-eEEEECCEEEEECCcCCCCcccceEEEEeCCCCe
Confidence 46777888765 346778877654322 111111111 1112256666777632 357888887654
No 433
>PRK10115 protease 2; Provisional
Probab=90.94 E-value=6.3 Score=30.73 Aligned_cols=110 Identities=10% Similarity=-0.064 Sum_probs=58.9
Q ss_pred EEEEEEeeCCCeEEEEcCC-Cc--EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC---
Q psy1859 16 TRCIKCFPNKQGYVLSSIE-GR--AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD--- 89 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~-g~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d--- 89 (162)
+..+.++|++++++.+.+. |. -.|+..+..++ ..+.. .... .-..++|.++++.|+....+
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg--~~l~~--~i~~---------~~~~~~w~~D~~~~~y~~~~~~~ 195 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETG--NWYPE--LLDN---------VEPSFVWANDSWTFYYVRKHPVT 195 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCC--CCCCc--cccC---------cceEEEEeeCCCEEEEEEecCCC
Confidence 4557789999988876332 22 22333555431 11111 0000 12459999998765544322
Q ss_pred ---CeEEEEeCCCc--cceeeeeeccccee-EE-EcCCCCEEEEec---CCCeEEEEeC
Q psy1859 90 ---GYVNIWDGFNK--KRLCQFHRYDTGIT-SL-FHQEYNTFATGG---SDGYVNIWDG 138 (162)
Q Consensus 90 ---~~v~~wd~~~~--~~~~~~~~~~~~v~-~~-~~~~~~~l~~~~---~d~~i~iwd~ 138 (162)
..|+.+++.++ +....+........ .. .+.++++++..+ .++.+.+++.
T Consensus 196 ~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 196 LLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred CCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 46788888876 33333333223233 22 444888766554 3457888884
No 434
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=90.92 E-value=2.7 Score=26.37 Aligned_cols=28 Identities=14% Similarity=0.143 Sum_probs=22.6
Q ss_pred ceeEE-EcCCC------CEEEEecCCCeEEEEeCC
Q psy1859 112 GITSL-FHQEY------NTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 112 ~v~~~-~~~~~------~~l~~~~~d~~i~iwd~~ 139 (162)
.+..+ |||.| -+|++.+.++.|.||...
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 56677 99943 388999999999999865
No 435
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=90.61 E-value=1.4 Score=32.76 Aligned_cols=59 Identities=12% Similarity=0.176 Sum_probs=45.9
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCC
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~ 139 (162)
..++++++..|-|++||.-.-+....+++.+..|..+ .+.+|+++++.+.. .+.+-|++
T Consensus 573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 3589999999999999976555555667778888888 89999987776544 66777765
No 436
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=90.56 E-value=4.7 Score=28.65 Aligned_cols=67 Identities=15% Similarity=0.090 Sum_probs=38.6
Q ss_pred ceEEEEecCCCCEEEEec-----------CCC-eEEEEeCCC--ccc--eeeeeecccceeEE-EcCCCCEEEEecCCCe
Q psy1859 70 PVNAISFHQEYNTFATGG-----------SDG-YVNIWDGFN--KKR--LCQFHRYDTGITSL-FHQEYNTFATGGSDGY 132 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~-----------~d~-~v~~wd~~~--~~~--~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~ 132 (162)
....|+|.++|+++++.. ..+ .|.+++-.+ ++. ...+...-.....+ +.++| |+++.....
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~i 92 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPDI 92 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCeE
Confidence 467899999999888763 223 677776543 332 23333333345667 88888 444444443
Q ss_pred EEEEeC
Q psy1859 133 VNIWDG 138 (162)
Q Consensus 133 i~iwd~ 138 (162)
+++.|.
T Consensus 93 ~~~~d~ 98 (367)
T TIGR02604 93 LFLRDK 98 (367)
T ss_pred EEEeCC
Confidence 344454
No 437
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=90.44 E-value=2.5 Score=25.34 Aligned_cols=113 Identities=8% Similarity=0.059 Sum_probs=61.6
Q ss_pred EeeCCCeEEEEcCCCcEEEEEecCCccc------ceeeeeeeeeeeccCcccceeceEEEEecC---C--CCEEEEecCC
Q psy1859 21 CFPNKQGYVLSSIEGRAAVEYLDTGPEM------QKMKYAFKCHRIKEDGIEKIYPVNAISFHQ---E--YNTFATGGSD 89 (162)
Q Consensus 21 ~~~~~~~l~~~~~~g~i~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~--~~~l~~~~~d 89 (162)
|......|++++..|.|.| .++.... ...+..+...+ .|++++-.+ + ...|+.|+ .
T Consensus 6 fDG~~pcL~~aT~~gKV~I--H~ph~~~~~~~~~~~~i~~LNin~----------~italaaG~l~~~~~~D~LliGt-~ 72 (136)
T PF14781_consen 6 FDGVHPCLACATTGGKVFI--HNPHERGQRTGRQDSDISFLNINQ----------EITALAAGRLKPDDGRDCLLIGT-Q 72 (136)
T ss_pred eCCCceeEEEEecCCEEEE--ECCCccccccccccCceeEEECCC----------ceEEEEEEecCCCCCcCEEEEec-c
Confidence 4444556888888888888 4433211 11222222222 366665433 2 25666665 5
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE----EcCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL----FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~----~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
..+..||+.....+..-.. ...+.++ +.....-++..+.+..|.-+|....+..++.
T Consensus 73 t~llaYDV~~N~d~Fyke~-~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 73 TSLLAYDVENNSDLFYKEV-PDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred ceEEEEEcccCchhhhhhC-ccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence 5688999987655433222 2445544 4333334555556678888887655555443
No 438
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=89.76 E-value=8.7 Score=30.44 Aligned_cols=73 Identities=14% Similarity=0.162 Sum_probs=47.7
Q ss_pred ceEEEEecCCC-CEEEEecCCCeEEEEeCCCcc-----ceeeeeeccc----------ceeEE-EcCCCCEEEEecCCCe
Q psy1859 70 PVNAISFHQEY-NTFATGGSDGYVNIWDGFNKK-----RLCQFHRYDT----------GITSL-FHQEYNTFATGGSDGY 132 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~-----~~~~~~~~~~----------~v~~~-~~~~~~~l~~~~~d~~ 132 (162)
+...++|+|.. ..||.....|...+|++.... .+.......+ .-..+ |.++...|+.++.. .
T Consensus 147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~-~ 225 (765)
T PF10214_consen 147 PHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS-K 225 (765)
T ss_pred ccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-c
Confidence 56789999976 799999999999999992211 1111111111 22355 87777777777544 5
Q ss_pred EEEEeCCCcee
Q psy1859 133 VNIWDGFNKKR 143 (162)
Q Consensus 133 i~iwd~~~~~~ 143 (162)
+.++|+++...
T Consensus 226 l~~~d~~~~~~ 236 (765)
T PF10214_consen 226 LMLIDFESNWQ 236 (765)
T ss_pred eEEEECCCCCc
Confidence 78888876654
No 439
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=89.71 E-value=5.3 Score=27.87 Aligned_cols=80 Identities=13% Similarity=-0.087 Sum_probs=52.2
Q ss_pred CCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC--------------------CCeEEEEe
Q psy1859 79 EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS--------------------DGYVNIWD 137 (162)
Q Consensus 79 ~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~--------------------d~~i~iwd 137 (162)
++++.++-+..|.+..+|..+|+...... -.+....+ |. |+++++|-. ..-|.+-|
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~-vpG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vid 288 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAF-LPGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAVID 288 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEE-CCCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEEEE
Confidence 36777788888999999987765433221 23455666 65 777766632 13478889
Q ss_pred CCCceeeeeec--cCCCceeEEEecC
Q psy1859 138 GFNKKRLCQFH--RYDTGITSLCFSY 161 (162)
Q Consensus 138 ~~~~~~~~~~~--~~~~~v~~v~~~p 161 (162)
+++|..+..+. +--..+.+|++-|
T Consensus 289 l~tG~vv~~l~feg~v~EifdV~vLP 314 (335)
T TIGR03032 289 LNSGDVVHWLRFEGVIEEIYDVAVLP 314 (335)
T ss_pred CCCCCEEEEEEeCCceeEEEEEEEec
Confidence 99998877664 3334667777655
No 440
>KOG4460|consensus
Probab=89.64 E-value=5.4 Score=29.92 Aligned_cols=75 Identities=15% Similarity=0.073 Sum_probs=49.1
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeC---------CCcccee---eee------eccc--ceeEE-EcCCC---CEEE
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDG---------FNKKRLC---QFH------RYDT--GITSL-FHQEY---NTFA 125 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~---------~~~~~~~---~~~------~~~~--~v~~~-~~~~~---~~l~ 125 (162)
.|..+..++.|..++-.+.+|.+.++=. ++++... ++. .... .+... |+|+. ..|.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 5778888999988888888887766532 2333221 111 1112 23344 99965 5777
Q ss_pred EecCCCeEEEEeCCCceee
Q psy1859 126 TGGSDGYVNIWDGFNKKRL 144 (162)
Q Consensus 126 ~~~~d~~i~iwd~~~~~~~ 144 (162)
.-..|+.|++||+...+.+
T Consensus 185 iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred EEecCcEEEEEecCCcchh
Confidence 8889999999999765544
No 441
>KOG3630|consensus
Probab=89.59 E-value=0.98 Score=36.54 Aligned_cols=97 Identities=7% Similarity=-0.042 Sum_probs=56.8
Q ss_pred EEEEEeeCC-CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 17 RCIKCFPNK-QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 17 ~~i~~~~~~-~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
.++.|+|.- ...++...|+.|++....... ..+..+. ....+++++|+|.|++++.|...|.+.-|
T Consensus 159 ~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~---~~v~s~p----------~t~~~Tav~WSprGKQl~iG~nnGt~vQy 225 (1405)
T KOG3630|consen 159 LKNVWNPLVPLNSAVDLSDLSLRVKSTKQLA---QNVTSFP----------VTNSQTAVLWSPRGKQLFIGRNNGTEVQY 225 (1405)
T ss_pred ccccccCCccchhhhhccccchhhhhhhhhh---hhhcccC----------cccceeeEEeccccceeeEecCCCeEEEe
Confidence 456788753 345666778888873332211 1111111 11258999999999999999999999887
Q ss_pred eCCCc--cceeeeeec-ccceeEE-EcCCCCEEEE
Q psy1859 96 DGFNK--KRLCQFHRY-DTGITSL-FHQEYNTFAT 126 (162)
Q Consensus 96 d~~~~--~~~~~~~~~-~~~v~~~-~~~~~~~l~~ 126 (162)
...-. +.+...... ...|.++ |-....++++
T Consensus 226 ~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 226 EPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred ecccceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 65422 112111111 2457777 6655554444
No 442
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=89.53 E-value=2.7 Score=27.44 Aligned_cols=50 Identities=10% Similarity=0.081 Sum_probs=35.1
Q ss_pred CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 26 QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 26 ~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
+.|..+.....|.+|++..+. .+....+..-. .|..+.++..|.++++--
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~--~~~~~~F~Tv~----------~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEE--CPLLCTFSTVG----------RVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCC--CceeEEEcchh----------heeEEEeccccceEEEEE
Confidence 445555667789997766433 55555555443 599999999999999853
No 443
>KOG4441|consensus
Probab=89.04 E-value=8.5 Score=29.35 Aligned_cols=107 Identities=22% Similarity=0.307 Sum_probs=59.2
Q ss_pred CCCeEEEEcCC-Cc---EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe-----EEE
Q psy1859 24 NKQGYVLSSIE-GR---AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY-----VNI 94 (162)
Q Consensus 24 ~~~~l~~~~~~-g~---i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~-----v~~ 94 (162)
++..+++|+.+ |. -.+|.+|+..+.+.....+...+.. ..+..+ +|.+.++|+.||. +-.
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~-------~~v~~l----~g~iYavGG~dg~~~l~svE~ 400 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSD-------FGVAVL----DGKLYAVGGFDGEKSLNSVEC 400 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCcccc-------ceeEEE----CCEEEEEeccccccccccEEE
Confidence 45777888888 33 3367788776555554443333321 122222 4788889988854 667
Q ss_pred EeCCCcccee--eeeecccceeEEEcCCCCEEEEecCCC------eEEEEeCCCce
Q psy1859 95 WDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSDG------YVNIWDGFNKK 142 (162)
Q Consensus 95 wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~ 142 (162)
||..+.+.-. .+......... -.-+|+..++|+.++ .+..||..+++
T Consensus 401 YDp~~~~W~~va~m~~~r~~~gv-~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~ 455 (571)
T KOG4441|consen 401 YDPVTNKWTPVAPMLTRRSGHGV-AVLGGKLYIIGGGDGSSNCLNSVECYDPETNT 455 (571)
T ss_pred ecCCCCcccccCCCCcceeeeEE-EEECCEEEEEcCcCCCccccceEEEEcCCCCc
Confidence 7777644322 11111111111 223678888887554 56788877654
No 444
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=89.01 E-value=5.2 Score=26.88 Aligned_cols=63 Identities=14% Similarity=0.143 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccc-eeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQ-KMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFN 99 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~ 99 (162)
.+...++......+.+|.|....... .....+.... .+..++|. ++.++.+..++ ..+.|+.+
T Consensus 103 ~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~----------~~~~i~~~--~~~i~v~~~~~-f~~idl~~ 166 (275)
T PF00780_consen 103 EGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPD----------PPSSIAFL--GNKICVGTSKG-FYLIDLNT 166 (275)
T ss_pred ccceEEEEEECCEEEEEEEECCcccccceeEEEEcCC----------CcEEEEEe--CCEEEEEeCCc-eEEEecCC
Confidence 34444444555689998887643222 2333333222 58888887 45555555433 45556554
No 445
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=88.92 E-value=1 Score=18.71 Aligned_cols=25 Identities=8% Similarity=0.311 Sum_probs=18.6
Q ss_pred eEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 71 VNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
..+++.+++|+++++-+.+..|+++
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 5677788888888877777777654
No 446
>PHA03098 kelch-like protein; Provisional
Probab=88.52 E-value=8.7 Score=28.81 Aligned_cols=64 Identities=11% Similarity=0.197 Sum_probs=35.9
Q ss_pred CCCEEEEecCC--------CeEEEEeCCCccceee--eeecccceeEEEcCCCCEEEEecCC-----CeEEEEeCCCcee
Q psy1859 79 EYNTFATGGSD--------GYVNIWDGFNKKRLCQ--FHRYDTGITSLFHQEYNTFATGGSD-----GYVNIWDGFNKKR 143 (162)
Q Consensus 79 ~~~~l~~~~~d--------~~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~ 143 (162)
++.+++.|+.+ ..+.+||..+.+.... +.........+ .-+++.++.|+.+ +.+.+||..+.+-
T Consensus 437 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 515 (534)
T PHA03098 437 DGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLC-IFNNKIYVVGGDKYEYYINEIEVYDDKTNTW 515 (534)
T ss_pred CCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEE-EECCEEEEEcCCcCCcccceeEEEeCCCCEE
Confidence 45677777643 2378899887544321 21111111122 2267777777654 4788999887653
No 447
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=88.46 E-value=1.7 Score=31.81 Aligned_cols=119 Identities=13% Similarity=0.079 Sum_probs=59.9
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeee-eeeeeccCcccceeceE-EEEecCCCCEEEEecCCCe
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAF-KCHRIKEDGIEKIYPVN-AISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~-~~~~~p~~~~l~~~~~d~~ 91 (162)
..+..+-..|+|+.+..-+. .++.+++.+...-..+..... .+.. ...|+ .+..-..|..+++++.||.
T Consensus 221 ~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~--------~~~Vte~l~lL~Gg~SLLv~~~dG~ 291 (733)
T COG4590 221 SDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDS--------RHQVTEQLYLLSGGFSLLVVHEDGL 291 (733)
T ss_pred cchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCch--------HHHHHHHHHHHhCceeEEEEcCCCc
Confidence 34455678899998877655 667776666543212211111 1100 00122 2222234567788888888
Q ss_pred EEEE-eCCCc-cc----eeeeeecccceeEEEcC--CCCEEEEecCCCeEEEEeCCCce
Q psy1859 92 VNIW-DGFNK-KR----LCQFHRYDTGITSLFHQ--EYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 92 v~~w-d~~~~-~~----~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
|.-| |.+.+ .+ ++.++-....+..+ .| +.+-++.-+..|++.++.....+
T Consensus 292 vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l-~pe~~rkgF~~l~~~G~L~~f~st~~~ 349 (733)
T COG4590 292 VSQWFDVRRDGQPHLNHIRNFKLAPAEVQFL-LPETNRKGFYSLYRNGTLQSFYSTSEK 349 (733)
T ss_pred eeeeeeeecCCCCcceeeeccccCcccceee-ccccccceEEEEcCCCceeeeecccCc
Confidence 8755 66543 21 11111111222222 23 33456666777877777654443
No 448
>KOG4441|consensus
Probab=87.97 E-value=10 Score=28.95 Aligned_cols=109 Identities=17% Similarity=0.250 Sum_probs=60.7
Q ss_pred eeCCCeEEEEcCCCcE----EEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC-----eE
Q psy1859 22 FPNKQGYVLSSIEGRA----AVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG-----YV 92 (162)
Q Consensus 22 ~~~~~~l~~~~~~g~i----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~-----~v 92 (162)
.-+|+.+++|+.++.- .+-.+|+.++.++.+..+...+. ... ++. -++.+++.|+.|+ .+
T Consensus 425 ~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~---------~~g-~a~-~~~~iYvvGG~~~~~~~~~V 493 (571)
T KOG4441|consen 425 VLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRS---------GFG-VAV-LNGKIYVVGGFDGTSALSSV 493 (571)
T ss_pred EECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccc---------cce-EEE-ECCEEEEECCccCCCccceE
Confidence 3467788888766544 13336776655555544443332 111 222 2467888888776 36
Q ss_pred EEEeCCCccceee--eeecccceeEEEcCCCCEEEEecCCC-----eEEEEeCCCce
Q psy1859 93 NIWDGFNKKRLCQ--FHRYDTGITSLFHQEYNTFATGGSDG-----YVNIWDGFNKK 142 (162)
Q Consensus 93 ~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~ 142 (162)
..||..+.+.... +......+.. ..-++...++|+.|+ +|-.||..+.+
T Consensus 494 E~ydp~~~~W~~v~~m~~~rs~~g~-~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 494 ERYDPETNQWTMVAPMTSPRSAVGV-VVLGGKLYAVGGFDGNNNLNTVECYDPETDT 549 (571)
T ss_pred EEEcCCCCceeEcccCccccccccE-EEECCEEEEEecccCccccceeEEcCCCCCc
Confidence 6788877554332 2211221111 122677788888775 67788877665
No 449
>PRK13684 Ycf48-like protein; Provisional
Probab=87.72 E-value=7.7 Score=27.27 Aligned_cols=115 Identities=11% Similarity=0.083 Sum_probs=56.2
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
+.....+..+.+.++++.++++ ..|.+.+-.-|... ..+.... .... -...+.++.+.|++..++++ .+
T Consensus 211 ~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~-sW~~~~~-~~~~-------~~~~l~~v~~~~~~~~~~~G-~~ 279 (334)
T PRK13684 211 RNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLE-SWSKPII-PEIT-------NGYGYLDLAYRTPGEIWAGG-GN 279 (334)
T ss_pred CCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCC-ccccccC-Cccc-------cccceeeEEEcCCCCEEEEc-CC
Confidence 3334455677788887766654 45665431112111 1111110 0000 00147888999977766555 56
Q ss_pred CeEEEEeCCCccceeeee---ecccceeEE-EcCCCCEEEEecCCCeEEEEe
Q psy1859 90 GYVNIWDGFNKKRLCQFH---RYDTGITSL-FHQEYNTFATGGSDGYVNIWD 137 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~---~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd 137 (162)
|.+.. ....++.-.... .-....+.+ |..+++.++ .+..|.|.-++
T Consensus 280 G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~ 329 (334)
T PRK13684 280 GTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYV 329 (334)
T ss_pred CeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceEEEec
Confidence 65543 333333322221 122346666 665655555 44677776665
No 450
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=87.44 E-value=7.3 Score=26.73 Aligned_cols=71 Identities=14% Similarity=0.134 Sum_probs=46.0
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEec------CCCeEEEEeCCCceeeeeecc-----CCCcee
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG------SDGYVNIWDGFNKKRLCQFHR-----YDTGIT 155 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~-----~~~~v~ 155 (162)
....|++||..+.+...--..-.+.|+.+ |..+.++++.|. ....+..||+.+..-. .+.. -.++|.
T Consensus 14 ~C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~-~~~~~~s~~ipgpv~ 92 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWS-SLGGGSSNSIPGPVT 92 (281)
T ss_pred CCCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeee-ecCCcccccCCCcEE
Confidence 34678999988776655444567789999 886666676664 3457888998765421 2222 235666
Q ss_pred EEEe
Q psy1859 156 SLCF 159 (162)
Q Consensus 156 ~v~~ 159 (162)
.+.+
T Consensus 93 a~~~ 96 (281)
T PF12768_consen 93 ALTF 96 (281)
T ss_pred EEEe
Confidence 6655
No 451
>PHA02790 Kelch-like protein; Provisional
Probab=87.26 E-value=10 Score=28.18 Aligned_cols=105 Identities=11% Similarity=0.008 Sum_probs=48.6
Q ss_pred eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC---eEEEEeCCC
Q psy1859 23 PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG---YVNIWDGFN 99 (162)
Q Consensus 23 ~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~---~v~~wd~~~ 99 (162)
-++..+++|+.++.-.+..+++..+.......+...+. ....+. -++++.+.|+.++ .+..||.++
T Consensus 317 ~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~---------~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~ 385 (480)
T PHA02790 317 ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRC---------NPAVAS--INNVIYVIGGHSETDTTTEYLLPNH 385 (480)
T ss_pred ECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCc---------ccEEEE--ECCEEEEecCcCCCCccEEEEeCCC
Confidence 45666677765443234446654432333222221111 111222 2467778877553 466788776
Q ss_pred ccceee--eeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 100 KKRLCQ--FHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 100 ~~~~~~--~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
.+.... +....... ++..-+++..+.|+ ..-+||.++.+
T Consensus 386 ~~W~~~~~m~~~r~~~-~~~~~~~~IYv~GG---~~e~ydp~~~~ 426 (480)
T PHA02790 386 DQWQFGPSTYYPHYKS-CALVFGRRLFLVGR---NAEFYCESSNT 426 (480)
T ss_pred CEEEeCCCCCCccccc-eEEEECCEEEEECC---ceEEecCCCCc
Confidence 543221 11111111 11122455556653 45677876654
No 452
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=87.25 E-value=9 Score=30.74 Aligned_cols=30 Identities=17% Similarity=0.102 Sum_probs=23.4
Q ss_pred ceEEEEecCCCCEEEE-ecCCC-----eEEEEeCCC
Q psy1859 70 PVNAISFHQEYNTFAT-GGSDG-----YVNIWDGFN 99 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~-~~~d~-----~v~~wd~~~ 99 (162)
++.+-+|||+|+.++- .+.++ .|.+-|+++
T Consensus 351 ~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t 386 (912)
T TIGR02171 351 SVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA 386 (912)
T ss_pred ceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence 6889999999998887 34333 588888876
No 453
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=87.22 E-value=4.4 Score=26.47 Aligned_cols=48 Identities=19% Similarity=0.227 Sum_probs=34.2
Q ss_pred CCEEEEecCCCeEEEEeCCC--ccceeeeeecccceeEE-EcCCCCEEEEecC
Q psy1859 80 YNTFATGGSDGYVNIWDGFN--KKRLCQFHRYDTGITSL-FHQEYNTFATGGS 129 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~--~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~ 129 (162)
+.+|++ .....|.+|++.. .++..++..- +.+..+ ++..|+|++|--.
T Consensus 29 d~Lfva-~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~ 79 (215)
T PF14761_consen 29 DALFVA-ASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEE 79 (215)
T ss_pred ceEEEE-cCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEe
Confidence 344444 5667799999983 3445566543 678888 9999999999753
No 454
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=87.06 E-value=1.6 Score=34.25 Aligned_cols=102 Identities=12% Similarity=0.187 Sum_probs=59.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCC---cEEEEEecCCccccee-eeeeeeeeeccCcccceeceEEEEecCCCCEEEE
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEG---RAAVEYLDTGPEMQKM-KYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT 85 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g---~i~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 85 (162)
.+..|....++|-|+|..+++-..|| ...+..++.+. .++ .+.++-. ....+..++|+-....++
T Consensus 243 ep~~g~e~~LSWkpqgS~~ati~td~~~~S~~ViFfErNG--LrHGef~lr~~--------~dEk~~~~~wn~~s~vla- 311 (1243)
T COG5290 243 EPVTGMEHQLSWKPQGSKYATIGTDGCSTSESVIFFERNG--LRHGEFDLRVG--------CDEKAFLENWNLLSTVLA- 311 (1243)
T ss_pred CCcccchhccccccCCceeeeeccCCCCCcceEEEEccCC--cccCCccccCC--------chhhhhhhhhhHHHHHHH-
Confidence 34455566799999999999876443 23333355432 111 1111111 112466777866544333
Q ss_pred ecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCC
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN 122 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~ 122 (162)
....+.+.+|...+..........-..+.-+ |+|..+
T Consensus 312 v~~~n~~~lwttkNyhWYLK~e~~ip~~s~vkwhpe~~ 349 (1243)
T COG5290 312 VAEGNLLKLWTTKNYHWYLKVERQIPGISYVKWHPEEK 349 (1243)
T ss_pred HhhcceEEEEEccceEEEEEEeecCCCcceeeeccccC
Confidence 3456789999988766655554555666677 998543
No 455
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=86.96 E-value=10 Score=28.02 Aligned_cols=110 Identities=10% Similarity=0.051 Sum_probs=59.0
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
.|..+++++.||.|.=| +|..+.......-.+.... ....+..+.-....+-+++-..+|.+.++.....+.+
T Consensus 279 Gg~SLLv~~~dG~vsQW-Fdvr~~~~p~l~h~R~f~l------~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~l 351 (733)
T COG4590 279 GGFSLLVVHEDGLVSQW-FDVRRDGQPHLNHIRNFKL------APAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLL 351 (733)
T ss_pred CceeEEEEcCCCceeee-eeeecCCCCcceeeecccc------CcccceeeccccccceEEEEcCCCceeeeecccCcce
Confidence 34557788889998887 5654321211110010000 0012222221122356777777888877765554433
Q ss_pred eeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 104 CQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 104 ~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
-.-... ..+..+ +||.+.++++- +.|.++++.+.+..
T Consensus 352 L~~~~~-~~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~ 389 (733)
T COG4590 352 LFERAY-QAPQLVAMSPNQAYLLSE-DQGKIRLAQLENRN 389 (733)
T ss_pred ehhhhh-cCcceeeeCcccchheee-cCCceEEEEecCCC
Confidence 222222 244455 99999888776 55689999887654
No 456
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=86.89 E-value=11 Score=27.96 Aligned_cols=60 Identities=10% Similarity=0.165 Sum_probs=33.5
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
+-..|+|.|+++.|++--..|.|++ ++...........+...... .-......|+++|+-
T Consensus 31 ~Pw~maflPDG~llVtER~~G~I~~--v~~~~~~~~~~~~l~~v~~~----~ge~GLlglal~PdF 90 (454)
T TIGR03606 31 KPWALLWGPDNQLWVTERATGKILR--VNPETGEVKVVFTLPEIVND----AQHNGLLGLALHPDF 90 (454)
T ss_pred CceEEEEcCCCeEEEEEecCCEEEE--EeCCCCceeeeecCCceecc----CCCCceeeEEECCCc
Confidence 3468999999987766544688887 44432112222222111000 012368999999874
No 457
>KOG3616|consensus
Probab=86.48 E-value=3 Score=32.70 Aligned_cols=65 Identities=18% Similarity=0.237 Sum_probs=40.8
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEe
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWD 137 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd 137 (162)
.++++.-+|.+..++.++.||.|.+|+....+..+.... ..+-..+ |...| |++...|..+.-|.
T Consensus 16 ~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~-~~p~~nlv~tnhg--l~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 16 FTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEE-AKPKENLVFTNHG--LVTATSDRRALAWK 81 (1636)
T ss_pred eeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhh-cCCccceeeeccc--eEEEeccchhheee
Confidence 578888899999999999999999999865443222111 1222333 54444 44444455555554
No 458
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=86.47 E-value=8.7 Score=26.61 Aligned_cols=76 Identities=13% Similarity=0.227 Sum_probs=43.3
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.|+.+|...++|.+|+++-.-..|.+ ++..+ .+.+..+.+.....+. . .-...+|-.+-+.+-.+..++.|.
T Consensus 144 ~HiNsV~~~~~G~yLiS~R~~~~i~~--I~~~t--G~I~W~lgG~~~~df~--~--~~~~f~~QHdar~~~~~~~~~~Is 215 (299)
T PF14269_consen 144 FHINSVDKDDDGDYLISSRNTSTIYK--IDPST--GKIIWRLGGKRNSDFT--L--PATNFSWQHDARFLNESNDDGTIS 215 (299)
T ss_pred cEeeeeeecCCccEEEEecccCEEEE--EECCC--CcEEEEeCCCCCCccc--c--cCCcEeeccCCEEeccCCCCCEEE
Confidence 58888988889999888766566655 77666 5666665554211100 0 112233333333333445667777
Q ss_pred EEeC
Q psy1859 94 IWDG 97 (162)
Q Consensus 94 ~wd~ 97 (162)
++|-
T Consensus 216 lFDN 219 (299)
T PF14269_consen 216 LFDN 219 (299)
T ss_pred EEcC
Confidence 7765
No 459
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=85.97 E-value=7.8 Score=26.84 Aligned_cols=69 Identities=10% Similarity=0.230 Sum_probs=45.3
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeeccc-ce----eEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT-GI----TSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~-~v----~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
-+.+|...++|.+|++.-.-..|.+.|.++++.+..+.+... .. ... +-.+-+++-.+..++.|.++|=
T Consensus 145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 466778888899999998889999999998888877754411 10 111 2223444444455666666664
No 460
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=85.75 E-value=10 Score=28.32 Aligned_cols=73 Identities=10% Similarity=0.125 Sum_probs=41.5
Q ss_pred eEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy1859 27 GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFN 99 (162)
Q Consensus 27 ~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~ 99 (162)
.|+.++.+|.+.+..|+.........+..........+......-..++.+|.++.++.+..++.+.++.++.
T Consensus 2 ~L~v~tdsg~l~~l~~~~~~~~~~~~~v~~~~~~~~~~~r~~~~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~ 74 (504)
T PF10433_consen 2 SLVVTTDSGKLSILEYDPSTHGFFKEFVHQWEPLSKSGSRLSQPGQYLAVDPSGRCIAVSAYEGNFLVYPLNR 74 (504)
T ss_dssp EEEEEETTTEEEEEEEEEETTEE-E-EEEEEEE---SSSEB-TT--EEEE-TTSSEEEEEEBTTEEEEEE-SS
T ss_pred EEEEEECCCCEEEEEEECCCCccceeeEEEeEecCCCCCChhcCCcEEEECCcCCEEEEEecCCeEEEEEecc
Confidence 5777888898888777753311111000000111111222233556788999999999999999999999887
No 461
>PRK13684 Ycf48-like protein; Provisional
Probab=85.62 E-value=10 Score=26.66 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=57.6
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
......+.+..+.+.|++.++++ +..|.+.. ..+.......... .... ..+.++.+.++++.++++
T Consensus 167 ~~~~~~g~~~~i~~~~~g~~v~~-g~~G~i~~-s~~~gg~tW~~~~---~~~~--------~~l~~i~~~~~g~~~~vg- 232 (334)
T PRK13684 167 LVEDAAGVVRNLRRSPDGKYVAV-SSRGNFYS-TWEPGQTAWTPHQ---RNSS--------RRLQSMGFQPDGNLWMLA- 232 (334)
T ss_pred CcCCCcceEEEEEECCCCeEEEE-eCCceEEE-EcCCCCCeEEEee---CCCc--------ccceeeeEcCCCCEEEEe-
Confidence 33444556777888887765554 44454432 1222211122111 1111 158899999998877765
Q ss_pred CCCeEEEEeCCCccceeeeee----cccceeEE-EcCCCCEEEEecCCCeEE
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHR----YDTGITSL-FHQEYNTFATGGSDGYVN 134 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~----~~~~v~~~-~~~~~~~l~~~~~d~~i~ 134 (162)
..|.+.+=....+..-..... ....+..+ +.|++..++++ .+|.+.
T Consensus 233 ~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~ 283 (334)
T PRK13684 233 RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL 283 (334)
T ss_pred cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEEc-CCCeEE
Confidence 456654322333322111111 12346677 88887765555 566554
No 462
>PHA02790 Kelch-like protein; Provisional
Probab=83.83 E-value=16 Score=27.24 Aligned_cols=60 Identities=7% Similarity=0.021 Sum_probs=32.0
Q ss_pred CCCEEEEecCCCeEEEEeCCCcccee--eeeecccceeEEEcCCCCEEEEecCC-----CeEEEEeCCCce
Q psy1859 79 EYNTFATGGSDGYVNIWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSD-----GYVNIWDGFNKK 142 (162)
Q Consensus 79 ~~~~l~~~~~d~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 142 (162)
++++.+.|+ .+..||..+.+... .+.........+ .-+++..+.|+.+ ..+..||..+++
T Consensus 407 ~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~~~~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~~ 473 (480)
T PHA02790 407 GRRLFLVGR---NAEFYCESSNTWTLIDDPIYPRDNPELI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTYS 473 (480)
T ss_pred CCEEEEECC---ceEEecCCCCcEeEcCCCCCCccccEEE-EECCEEEEECCcCCCcccceEEEEECCCCe
Confidence 456666664 46778887654332 221111111111 2267777887754 356677776654
No 463
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=83.39 E-value=13 Score=25.97 Aligned_cols=68 Identities=13% Similarity=0.176 Sum_probs=45.5
Q ss_pred eEEEEecCCCCEEEEecCCCeEEEEeCCC------c-cceeeeee-----cccceeEE-EcCCC------------CEEE
Q psy1859 71 VNAISFHQEYNTFATGGSDGYVNIWDGFN------K-KRLCQFHR-----YDTGITSL-FHQEY------------NTFA 125 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~d~~v~~wd~~~------~-~~~~~~~~-----~~~~v~~~-~~~~~------------~~l~ 125 (162)
-..|+++|.+.+-++....+...+||... . ..+..+.. .....+.+ |+... ..++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi 104 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL 104 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence 45899999998888888889999999871 1 12223321 12244555 55322 2367
Q ss_pred EecCCCeEEEEeC
Q psy1859 126 TGGSDGYVNIWDG 138 (162)
Q Consensus 126 ~~~~d~~i~iwd~ 138 (162)
.+++||+|.-|..
T Consensus 105 f~tEdGTisaW~p 117 (336)
T TIGR03118 105 FVTEDGTLSGWAP 117 (336)
T ss_pred EEeCCceEEeecC
Confidence 7789999999985
No 464
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=83.09 E-value=12 Score=29.42 Aligned_cols=73 Identities=14% Similarity=0.035 Sum_probs=47.5
Q ss_pred cEEEEEEe--eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC---C---EEEEe
Q psy1859 15 QTRCIKCF--PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY---N---TFATG 86 (162)
Q Consensus 15 ~~~~i~~~--~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~---~l~~~ 86 (162)
....++++ ...+++|++++...|.|+-+............ +. +..-|.+|.|-++. . .++++
T Consensus 165 SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s---~~-------~~hNIP~VSFl~~~~d~~G~v~v~a~ 234 (717)
T PF08728_consen 165 SAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPS---HQ-------HSHNIPNVSFLDDDLDPNGHVKVVAT 234 (717)
T ss_pred ceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccc---cc-------cccCCCeeEeecCCCCCccceEEEEE
Confidence 44557777 66788888888899999877763211111111 11 22248888886643 2 77788
Q ss_pred cCCCeEEEEeC
Q psy1859 87 GSDGYVNIWDG 97 (162)
Q Consensus 87 ~~d~~v~~wd~ 97 (162)
+-.|.+.+|++
T Consensus 235 dI~G~v~~~~I 245 (717)
T PF08728_consen 235 DISGEVWTFKI 245 (717)
T ss_pred eccCcEEEEEE
Confidence 88999999888
No 465
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=82.97 E-value=14 Score=25.94 Aligned_cols=114 Identities=11% Similarity=0.066 Sum_probs=62.7
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCc------EEEEEecCCcccceeeeeeeeeeecc-Ccc---cceeceEEEEecCCCCEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGR------AAVEYLDTGPEMQKMKYAFKCHRIKE-DGI---EKIYPVNAISFHQEYNTF 83 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~------i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~v~~~~~~p~~~~l 83 (162)
+..+.|.+.+++..+++.+++|. .....++........+.......... .+. .-..-..+|++.+++.++
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~ 99 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW 99 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence 45678999976556666677776 44433333111011111111111000 000 000135578887788888
Q ss_pred EEecCC------CeEEEEeCCCccceeeee---------------ecccceeEE-EcCCCCEEEEec
Q psy1859 84 ATGGSD------GYVNIWDGFNKKRLCQFH---------------RYDTGITSL-FHQEYNTFATGG 128 (162)
Q Consensus 84 ~~~~~d------~~v~~wd~~~~~~~~~~~---------------~~~~~v~~~-~~~~~~~l~~~~ 128 (162)
++.-.+ ..|..++.. |+....+. ..+...-.+ ++|+|+.|+++.
T Consensus 100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~ 165 (326)
T PF13449_consen 100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM 165 (326)
T ss_pred EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence 888777 889999876 55544331 123456678 999999766664
No 466
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=82.96 E-value=16 Score=26.60 Aligned_cols=88 Identities=10% Similarity=0.070 Sum_probs=47.4
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCcc-----ceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKK-----RLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~-----~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
.+.++.|.+++.+++++ ..|.+. +....++ ....... ....+..+ |.+++..+++| ..|.+.... ..+
T Consensus 282 ~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G 357 (398)
T PLN00033 282 RIQNMGWRADGGLWLLT-RGGGLY-VSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGG 357 (398)
T ss_pred ceeeeeEcCCCCEEEEe-CCceEE-EecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCC
Confidence 58899999998888766 445543 3333332 1222221 12347778 88777766555 666655543 233
Q ss_pred eeeeee---ccCCCceeEEEecC
Q psy1859 142 KRLCQF---HRYDTGITSLCFSY 161 (162)
Q Consensus 142 ~~~~~~---~~~~~~v~~v~~~p 161 (162)
+.=... ..-....+.+.|.+
T Consensus 358 ~tW~~~~~~~~~~~~ly~v~f~~ 380 (398)
T PLN00033 358 KSWKRDKGADNIAANLYSVKFFD 380 (398)
T ss_pred cceeEccccCCCCcceeEEEEcC
Confidence 321111 12234566777644
No 467
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=82.58 E-value=3.4 Score=18.65 Aligned_cols=21 Identities=19% Similarity=0.196 Sum_probs=15.9
Q ss_pred CCCEEEEecCCCeEEEEeCCC
Q psy1859 120 EYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 120 ~~~~l~~~~~d~~i~iwd~~~ 140 (162)
.+..++.++.|+.+..+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 466888899999999998764
No 468
>PF14157 YmzC: YmzC-like protein; PDB: 3KVP_E.
Probab=82.17 E-value=5.1 Score=20.45 Aligned_cols=28 Identities=7% Similarity=0.192 Sum_probs=20.2
Q ss_pred CCCeEEEEcCCCcEEEEEecCCccccee
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKM 51 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~ 51 (162)
..+.|+.-+.++.|+|+.+|..++..+.
T Consensus 28 ~~N~Fav~~e~~~iKIfkyd~~tNei~L 55 (63)
T PF14157_consen 28 EHNHFAVVDEDGQIKIFKYDEDTNEITL 55 (63)
T ss_dssp STTEEEEE-ETTEEEEEEEETTTTEEEE
T ss_pred cCCEEEEEecCCeEEEEEeCCCCCeEEE
Confidence 3456777789999999999988744433
No 469
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=81.87 E-value=8 Score=27.15 Aligned_cols=24 Identities=13% Similarity=0.202 Sum_probs=19.0
Q ss_pred ceEEEEecCCCCEEEEecCCCeEE
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.+..+++.|+|.++++...+|.|+
T Consensus 307 r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 307 RPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp -EEEEEEETTSEEEEEE-TTTTEE
T ss_pred CceEEEEcCCCeEEEEECCCCeEe
Confidence 588999999999888888888764
No 470
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=81.77 E-value=23 Score=28.23 Aligned_cols=68 Identities=15% Similarity=0.022 Sum_probs=46.9
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeecccc--------eeEE--Ec---------------CCCCEEEEecCCCeEE
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTG--------ITSL--FH---------------QEYNTFATGGSDGYVN 134 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~--------v~~~--~~---------------~~~~~l~~~~~d~~i~ 134 (162)
+..+..++.++.|.-.|.++|+.+.++...... ...+ +. .++..++.++.|+.|.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 456667777888988999888877665432110 1112 22 1345788888999999
Q ss_pred EEeCCCceeeeee
Q psy1859 135 IWDGFNKKRLCQF 147 (162)
Q Consensus 135 iwd~~~~~~~~~~ 147 (162)
-.|.++|+....+
T Consensus 274 ALDA~TGk~~W~f 286 (764)
T TIGR03074 274 ALDADTGKLCEDF 286 (764)
T ss_pred EEECCCCCEEEEe
Confidence 9999999887655
No 471
>KOG3616|consensus
Probab=80.42 E-value=5.4 Score=31.41 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=26.9
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCc
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGP 46 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~ 46 (162)
-+.++.-+|.+..++.++.||.+.++.|.+..
T Consensus 16 ~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~ 47 (1636)
T KOG3616|consen 16 FTTAIQSHPGGQSFVLAHQDGSIILFNFIPRR 47 (1636)
T ss_pred eeeeeeecCCCceEEEEecCCcEEEEeecccc
Confidence 34667788999999999999999998887654
No 472
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=80.15 E-value=7.8 Score=21.31 Aligned_cols=29 Identities=0% Similarity=0.062 Sum_probs=21.8
Q ss_pred cceeEE-EcCCCCEEEEec-CCCeEEEEeCC
Q psy1859 111 TGITSL-FHQEYNTFATGG-SDGYVNIWDGF 139 (162)
Q Consensus 111 ~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~ 139 (162)
.....+ ++|+++++.+++ ..+.|++|...
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 445567 899999887776 56789988764
No 473
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=79.36 E-value=21 Score=26.47 Aligned_cols=52 Identities=12% Similarity=0.120 Sum_probs=34.0
Q ss_pred cceeEE-EcCCCCEEEEecCCCeEEEEeCCCce--eeeeec-----cCCCceeEEEecCC
Q psy1859 111 TGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK--RLCQFH-----RYDTGITSLCFSYD 162 (162)
Q Consensus 111 ~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~-----~~~~~v~~v~~~pd 162 (162)
.....+ |.|||++|++--..|.|++++..++. .+..+. .-.+....|+|+||
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~Pd 89 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPD 89 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCC
Confidence 345667 89999877777556899988765443 221111 12457888999886
No 474
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=79.03 E-value=19 Score=25.05 Aligned_cols=69 Identities=10% Similarity=0.048 Sum_probs=33.9
Q ss_pred CCCeEEEEcCC-C--cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC----eEEEEe
Q psy1859 24 NKQGYVLSSIE-G--RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG----YVNIWD 96 (162)
Q Consensus 24 ~~~~l~~~~~~-g--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~----~v~~wd 96 (162)
+++.++.|+.. + .-.+|.+|+.+.....+..+..... ....+..-++++++.|+.++ .+..||
T Consensus 123 ~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~r----------~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd 192 (323)
T TIGR03548 123 DGTLYVGGGNRNGKPSNKSYLFNLETQEWFELPDFPGEPR----------VQPVCVKLQNELYVFGGGSNIAYTDGYKYS 192 (323)
T ss_pred CCEEEEEeCcCCCccCceEEEEcCCCCCeeECCCCCCCCC----------CcceEEEECCEEEEEcCCCCccccceEEEe
Confidence 46666666542 1 1235567776543443322221110 11111223467777777653 346788
Q ss_pred CCCccc
Q psy1859 97 GFNKKR 102 (162)
Q Consensus 97 ~~~~~~ 102 (162)
..+.+.
T Consensus 193 ~~~~~W 198 (323)
T TIGR03548 193 PKKNQW 198 (323)
T ss_pred cCCCee
Confidence 876543
No 475
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=76.92 E-value=36 Score=27.18 Aligned_cols=122 Identities=9% Similarity=-0.030 Sum_probs=64.9
Q ss_pred EEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeee-cc-CcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 17 RCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRI-KE-DGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 17 ~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..++|+| +.+.||+....|...||++............+..... .- ........-..+.|.++...|+.++. ..+.
T Consensus 149 aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~~l~ 227 (765)
T PF10214_consen 149 ADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-SKLM 227 (765)
T ss_pred ceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-CceE
Confidence 4589999 4568999999999999888211111111111111100 00 00011134557889888777777764 4578
Q ss_pred EEeCCCcccee-ee-eecccceeEE-EcCC-CCEEEEecCCCeEEEEeCCC
Q psy1859 94 IWDGFNKKRLC-QF-HRYDTGITSL-FHQE-YNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 94 ~wd~~~~~~~~-~~-~~~~~~v~~~-~~~~-~~~l~~~~~d~~i~iwd~~~ 140 (162)
++|+.+..... .. ......+..+ -+|+ ..+++.-.. ..|...++..
T Consensus 228 ~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs-~eiiw~~~~~ 277 (765)
T PF10214_consen 228 LIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTS-KEIIWLDVKS 277 (765)
T ss_pred EEECCCCCccchhccCCChhheeeEEecCCccceEEEEec-CeEEEEEccC
Confidence 88998765422 11 2234456666 5553 223222221 3555556654
No 476
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=74.95 E-value=12 Score=20.73 Aligned_cols=47 Identities=4% Similarity=-0.049 Sum_probs=25.0
Q ss_pred CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE-EEecCCCeEE
Q psy1859 35 GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-ATGGSDGYVN 93 (162)
Q Consensus 35 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d~~v~ 93 (162)
.+=+++.+|+.++..+.+ +.+-. ....+++++++..+ ++-+....|.
T Consensus 35 ~~GRll~ydp~t~~~~vl--~~~L~----------fpNGVals~d~~~vlv~Et~~~Ri~ 82 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVL--LDGLY----------FPNGVALSPDESFVLVAETGRYRIL 82 (89)
T ss_dssp --EEEEEEETTTTEEEEE--EEEES----------SEEEEEE-TTSSEEEEEEGGGTEEE
T ss_pred CCcCEEEEECCCCeEEEe--hhCCC----------ccCeEEEcCCCCEEEEEeccCceEE
Confidence 344566688776322222 22222 47899999999754 4445444444
No 477
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=74.56 E-value=5.5 Score=16.60 Aligned_cols=25 Identities=28% Similarity=0.454 Sum_probs=19.2
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEe
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWD 96 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd 96 (162)
.|.+++..+ .+++.+...+.+++|.
T Consensus 3 ~i~aia~g~--~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 3 EIEAIAAGD--SWVAVATSAGYLRIFS 27 (27)
T ss_pred eEEEEEccC--CEEEEEeCCCeEEecC
Confidence 477887754 5788888889999874
No 478
>KOG2247|consensus
Probab=74.01 E-value=0.84 Score=33.50 Aligned_cols=96 Identities=8% Similarity=0.041 Sum_probs=62.1
Q ss_pred ccEEEEEEeeCCCeEE-EEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 14 FQTRCIKCFPNKQGYV-LSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~-~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
+..-.++|..++..++ .+-..+.+.+|+.+.+. .. ...+.+... -.-+.|++.+..++.+...|.+
T Consensus 75 g~aldm~wDkegdvlavlAek~~piylwd~n~ey--tq-qLE~gg~~s----------~sll~wsKg~~el~ig~~~gn~ 141 (615)
T KOG2247|consen 75 GKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEY--TQ-QLESGGTSS----------KSLLAWSKGTPELVIGNNAGNI 141 (615)
T ss_pred hhHhhhhhccccchhhhhhhcCCCeeechhhhhh--HH-HHhccCcch----------HHHHhhccCCccccccccccce
Confidence 3334567777766544 45677889996665432 11 122222211 1237899988999999999999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYN 122 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~ 122 (162)
.+++....+.+-..-.|...++++ +.+++.
T Consensus 142 viynhgtsR~iiv~Gkh~RRgtq~av~lEd~ 172 (615)
T KOG2247|consen 142 VIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY 172 (615)
T ss_pred EEEeccchhhhhhhcccccceeEEEecccce
Confidence 999988776665555566677777 777653
No 479
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=72.62 E-value=28 Score=23.97 Aligned_cols=72 Identities=15% Similarity=0.223 Sum_probs=42.6
Q ss_pred ceEEEEecCCCCEEEEec------CCCeEEEEeCCCccceeeee----ecccceeEE-E-cCCCCEEE-Eec---CCCeE
Q psy1859 70 PVNAISFHQEYNTFATGG------SDGYVNIWDGFNKKRLCQFH----RYDTGITSL-F-HQEYNTFA-TGG---SDGYV 133 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~------~d~~v~~wd~~~~~~~~~~~----~~~~~v~~~-~-~~~~~~l~-~~~---~d~~i 133 (162)
.|.++.|..+.++++.|. ....+..||..+......-. .-.+++..+ + ..|+..+. .|. .+..|
T Consensus 38 ~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l 117 (281)
T PF12768_consen 38 TVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALTFISNDGSNFWVAGRSANGSTFL 117 (281)
T ss_pred EEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEEeeccCCceEEEeceecCCCceE
Confidence 699999987677777764 35678889988754322111 123667666 3 33554344 333 23357
Q ss_pred EEEeCCCc
Q psy1859 134 NIWDGFNK 141 (162)
Q Consensus 134 ~iwd~~~~ 141 (162)
..||-.+-
T Consensus 118 ~~~dGs~W 125 (281)
T PF12768_consen 118 MKYDGSSW 125 (281)
T ss_pred EEEcCCce
Confidence 77765443
No 480
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=72.60 E-value=34 Score=24.91 Aligned_cols=118 Identities=15% Similarity=0.219 Sum_probs=59.7
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
...+....+..+.+.+++..++++ ..|.+.. .-+... ......+....... -...+.++.|.+++..+++|
T Consensus 275 ~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~--~~~~~~f~~~~~~~----~~~~l~~v~~~~d~~~~a~G- 345 (398)
T PLN00033 275 HNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGL--TEEDFDFEEADIKS----RGFGILDVGYRSKKEAWAAG- 345 (398)
T ss_pred ecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCC--cccccceeecccCC----CCcceEEEEEcCCCcEEEEE-
Confidence 344444556778888888876664 5565443 222211 00000111110000 00148889999887766655
Q ss_pred CCCeEEEEeCCCccceeee---eecccceeEE-EcCCCCEEEEecCCCeEEEE
Q psy1859 88 SDGYVNIWDGFNKKRLCQF---HRYDTGITSL-FHQEYNTFATGGSDGYVNIW 136 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~---~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iw 136 (162)
..|.+.... ..++.-... .......+.+ |.++++.+++| .+|.|.-|
T Consensus 346 ~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~ 396 (398)
T PLN00033 346 GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY 396 (398)
T ss_pred CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence 566655543 334332222 2223456778 87776666666 56665433
No 481
>KOG1900|consensus
Probab=72.54 E-value=42 Score=28.40 Aligned_cols=85 Identities=12% Similarity=0.056 Sum_probs=49.8
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeee----------eccCcccceeceEEEEecCCCCEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR----------IKEDGIEKIYPVNAISFHQEYNTF 83 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~v~~~~~~p~~~~l 83 (162)
..+.||....+|+.|++|-++ .+.=..+....+........-++. .......+.++|..+........+
T Consensus 179 ~~V~~I~~t~nGRIF~~G~dg-~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~Il 257 (1311)
T KOG1900|consen 179 VSVNCITYTENGRIFFAGRDG-NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNIL 257 (1311)
T ss_pred ceEEEEEeccCCcEEEeecCC-CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecccccee
Confidence 456788877788887776555 333222333321111100000000 000111355689999998888899
Q ss_pred EEecCCCeEEEEeCCC
Q psy1859 84 ATGGSDGYVNIWDGFN 99 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~ 99 (162)
.+-+..+.|..||+..
T Consensus 258 Y~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 258 YVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eeeccCceEEEEEccC
Confidence 9999999999999986
No 482
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=72.18 E-value=45 Score=27.17 Aligned_cols=53 Identities=9% Similarity=-0.048 Sum_probs=35.1
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEE-ecCC-----CeEEEEeCCCc
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFAT-GGSD-----GYVNIWDGFNK 141 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~-~~~d-----~~i~iwd~~~~ 141 (162)
.+.|.+-|.....+...-.....++.+- |||||+.|+. .+.. ..|.+-|+++.
T Consensus 328 ~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~ 387 (912)
T TIGR02171 328 TGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNAS 387 (912)
T ss_pred CCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhcc
Confidence 3577777776554443202346677777 9999999988 4333 35888888753
No 483
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=71.78 E-value=28 Score=27.71 Aligned_cols=78 Identities=13% Similarity=0.028 Sum_probs=46.7
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeee--eeee--------eccCcccceeceEEEEecCCCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAF--KCHR--------IKEDGIEKIYPVNAISFHQEYN 81 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~v~~~~~~p~~~ 81 (162)
+...|.++....-+..++.+..||.|.+ +|..+ .+.+... .+.. ..++...+...+..++|||.+.
T Consensus 258 ~~~~V~si~~~~~~~~v~~~~~DGsI~~--~dr~t--~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c 333 (753)
T PF11635_consen 258 LNKRVVSITSPELDIVVAFAFSDGSIEF--RDRNT--MKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMC 333 (753)
T ss_pred cCCeEEEEEecccCcEEEEEEcCCeEEE--EecCc--chhhcccccccCCccccccccccccccccCCCCceEEECcccc
Confidence 3455666666666778999999999999 55443 2111111 0000 0001112222456789999998
Q ss_pred EEEEecCCCeEE
Q psy1859 82 TFATGGSDGYVN 93 (162)
Q Consensus 82 ~l~~~~~d~~v~ 93 (162)
.++.-..+|.+.
T Consensus 334 ~~v~~~~~~~~~ 345 (753)
T PF11635_consen 334 SLVQIDEDGKTK 345 (753)
T ss_pred eEEEEecCCCce
Confidence 888888888855
No 484
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=71.35 E-value=29 Score=23.57 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=31.7
Q ss_pred CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceece---EEEEecCCCCEEEEecCCCeEEEE
Q psy1859 26 QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPV---NAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 26 ~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
..++.|+.+|.+.| +|.+. ............ ++ ..-.|..-...++.+++||.|++.
T Consensus 196 scLViGTE~~~i~i--Ld~~a--f~il~~~~lpsv---------Pv~i~~~G~~devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 196 SCLVIGTESGEIYI--LDPQA--FTILKQVQLPSV---------PVFISVSGQYDEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred ceEEEEecCCeEEE--ECchh--heeEEEEecCCC---------ceEEEEEeeeeccceEEEEEeCCCEEEEE
Confidence 45899999999999 77654 333333222211 11 111122123467777788887653
No 485
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=71.06 E-value=35 Score=24.31 Aligned_cols=67 Identities=13% Similarity=0.042 Sum_probs=41.6
Q ss_pred CCCEEEEecCCCeEEEEeCCCccceeeeeeccc-ceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy1859 79 EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT-GITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 79 ~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~-~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
+|+ +..++.++.+..+|.++|+.+........ .+... .-.++ .+..++.++.+.-.|..+++.....
T Consensus 111 ~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~ 179 (370)
T COG1520 111 DGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTY 179 (370)
T ss_pred CCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEE
Confidence 555 67778888999999988887776654441 11111 22233 3333336788888888777765554
No 486
>PF12275 DUF3616: Protein of unknown function (DUF3616); InterPro: IPR022060 This family of proteins is found in bacteria. Proteins in this family are typically between 335 and 392 amino acids in length. There is a conserved GLRGPV sequence motif.
Probab=70.96 E-value=27 Score=24.72 Aligned_cols=33 Identities=9% Similarity=0.055 Sum_probs=22.4
Q ss_pred ccEEEEEEeeCCCeEEEE---cCCCcEEEEEecCCc
Q psy1859 14 FQTRCIKCFPNKQGYVLS---SIEGRAAVEYLDTGP 46 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~---~~~g~i~i~~~~~~~ 46 (162)
..|+.|++..++-++++| ..++...+|.|+...
T Consensus 232 ~GIRdl~~~~~~~lILAGp~~~~~g~~~l~~W~g~~ 267 (330)
T PF12275_consen 232 LGIRDLCYDGDDLLILAGPTMDLDGPFRLYRWSGAP 267 (330)
T ss_pred CcEeeeeeCCCcEEEEeCCCCCCCCCEEEEEEeCCC
Confidence 457888777764444444 336889999998654
No 487
>KOG1897|consensus
Probab=68.40 E-value=67 Score=26.53 Aligned_cols=122 Identities=10% Similarity=0.016 Sum_probs=66.1
Q ss_pred eeccccccEEEEEEeeC--C----CeEEEEcCCCcEEEEEecCCcccceeee-eeeeeeeccCcccceeceEEEEecCCC
Q psy1859 8 RESSLKFQTRCIKCFPN--K----QGYVLSSIEGRAAVEYLDTGPEMQKMKY-AFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~--~----~~l~~~~~~g~i~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
....+...+.|+.++|- + +++++|.++..+.+..+.+.. ..... .+.+...+ ..+.-..+-.+.
T Consensus 525 ~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~--~~~~~~~l~~~~iP-------RSIl~~~~e~d~ 595 (1096)
T KOG1897|consen 525 SHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDL--ILITHEQLSGEIIP-------RSILLTTFEGDI 595 (1096)
T ss_pred eeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCc--ceeeeeccCCCccc-------hheeeEEeeccc
Confidence 34557788899998874 2 268888888877765555432 11111 12222111 145555666667
Q ss_pred CEEEEecCCCeEEEEeCCC--ccceeee--eecccceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 81 NTFATGGSDGYVNIWDGFN--KKRLCQF--HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~--~~~~~~~--~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
.+|.++..||.+..|.+.. +..-..- .-...++.-- |+..++.-+.+..|.-..+|..
T Consensus 596 ~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~ 658 (1096)
T KOG1897|consen 596 HYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSS 658 (1096)
T ss_pred eEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEec
Confidence 8999999999998776554 3221111 1112233322 6654444444444544455544
No 488
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=68.31 E-value=24 Score=21.35 Aligned_cols=64 Identities=11% Similarity=0.004 Sum_probs=46.5
Q ss_pred EEEEecCCCeEEEEeCCCccceeeeeecc-cceeEE------------EcCCCCEEEEecCCCeEEEEeCCCceeee
Q psy1859 82 TFATGGSDGYVNIWDGFNKKRLCQFHRYD-TGITSL------------FHQEYNTFATGGSDGYVNIWDGFNKKRLC 145 (162)
Q Consensus 82 ~l~~~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~~~------------~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 145 (162)
+.+....||.+.+++..+++.+..+...+ +-+..+ ...+..+-++...||.+.+-|..|++.+.
T Consensus 43 l~f~d~~~G~v~V~~~~~G~~va~~~~g~~GFvrgvlR~l~R~R~~~gv~~~~Pf~L~r~~dGrltL~Dp~Tg~~i~ 119 (135)
T TIGR03054 43 LVFEDRPDGAVAVVETPDGRLVAILEPGQNGFVRVMLRGLARARARAGVAAEPPFRLTRYDNGRLTLTDPATGWSIE 119 (135)
T ss_pred EEEecCCCCeEEEEECCCCCEEEEecCCCCchhhHhHHHHHHHHHHcCCCCCCCEEEEEEeCCcEEEEcCCCCcEEE
Confidence 34566788999999988888888775332 222211 34567788899999999999999987654
No 489
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=68.04 E-value=41 Score=23.96 Aligned_cols=68 Identities=12% Similarity=0.052 Sum_probs=42.7
Q ss_pred EEEEecCCCeEEEEeCCCccceeeeeecc--cceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC
Q psy1859 82 TFATGGSDGYVNIWDGFNKKRLCQFHRYD--TGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY 150 (162)
Q Consensus 82 ~l~~~~~d~~v~~wd~~~~~~~~~~~~~~--~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 150 (162)
.+..+..+|.+.-.|..+++.+....... ..+..- +..+|+ ++.++.++.+..+|.++|+.+......
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~ 140 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVG 140 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecC
Confidence 44455778888888888877554332221 111111 333665 777778888889999888877665533
No 490
>KOG4659|consensus
Probab=67.84 E-value=40 Score=28.87 Aligned_cols=25 Identities=8% Similarity=0.175 Sum_probs=17.4
Q ss_pred cceeceEEEEecCCCCEEEEecCCC
Q psy1859 66 EKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 66 ~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
+|-....+++.+|+|..+++-..+-
T Consensus 659 A~lnsp~alaVsPdg~v~IAD~gN~ 683 (1899)
T KOG4659|consen 659 AKLNSPYALAVSPDGDVIIADSGNS 683 (1899)
T ss_pred cccCCcceEEECCCCcEEEecCCch
Confidence 3455678899999988777654443
No 491
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=66.84 E-value=31 Score=27.76 Aligned_cols=69 Identities=16% Similarity=0.220 Sum_probs=35.0
Q ss_pred EEEEecCCCCEEEEecCCC-----eEEEEeCCC---ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 72 NAISFHQEYNTFATGGSDG-----YVNIWDGFN---KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 72 ~~~~~~p~~~~l~~~~~d~-----~v~~wd~~~---~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
..+.|-|+|..+++-..|| .|..+..+. |..-... +....+... |+-....++.+ ..+.+++|-.++-.
T Consensus 250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~-~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNyh 327 (1243)
T COG5290 250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRV-GCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNYH 327 (1243)
T ss_pred hccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccC-CchhhhhhhhhhHHHHHHHHh-hcceEEEEEccceE
Confidence 3589999999999866443 344444321 1111111 111222233 44433333333 45678888876543
No 492
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=65.17 E-value=53 Score=24.20 Aligned_cols=109 Identities=7% Similarity=0.015 Sum_probs=56.5
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC---C-CCEEEEecCCCeEEEEeCCC-
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ---E-YNTFATGGSDGYVNIWDGFN- 99 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~-~~~l~~~~~d~~v~~wd~~~- 99 (162)
...+++|+.+|.++| +++..........+-... ...+|..++.-. . ....++.-.-..+.+|.+..
T Consensus 37 ~d~IivGS~~G~LrI--y~P~~~~~~~~~lllE~~-------l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~ 107 (418)
T PF14727_consen 37 SDKIIVGSYSGILRI--YDPSGNEFQPEDLLLETQ-------LKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLV 107 (418)
T ss_pred ccEEEEeccccEEEE--EccCCCCCCCccEEEEEe-------cCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEec
Confidence 457999999999999 555432222111111111 112677666533 1 22333334456677777632
Q ss_pred -cc-------ceeeeeeccc--ceeEE----EcC-C-CCEEEEecCCCeEEEEeCCCce
Q psy1859 100 -KK-------RLCQFHRYDT--GITSL----FHQ-E-YNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 100 -~~-------~~~~~~~~~~--~v~~~----~~~-~-~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
+. .+..+..|.- ....+ |-. . ..++++-+-||.+.+++-+.-.
T Consensus 108 ~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~ 166 (418)
T PF14727_consen 108 DGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFA 166 (418)
T ss_pred CCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEE
Confidence 11 1122222221 12222 322 2 3578888999999999986543
No 493
>PF13964 Kelch_6: Kelch motif
Probab=65.08 E-value=14 Score=17.44 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=17.1
Q ss_pred eeCCCeEEEEcCCC----cEEEEEecCCcccce
Q psy1859 22 FPNKQGYVLSSIEG----RAAVEYLDTGPEMQK 50 (162)
Q Consensus 22 ~~~~~~l~~~~~~g----~i~i~~~~~~~~~~~ 50 (162)
.-+++.++.|+.+. .-.+|.+|..+...+
T Consensus 9 ~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 41 (50)
T PF13964_consen 9 VVGGKIYVFGGYDNSGKYSNDVERYDPETNTWE 41 (50)
T ss_pred EECCEEEEECCCCCCCCccccEEEEcCCCCcEE
Confidence 34567777776665 344566777653333
No 494
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=64.97 E-value=49 Score=24.52 Aligned_cols=72 Identities=15% Similarity=0.079 Sum_probs=46.2
Q ss_pred eceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcC--CCCEEEEecCCCe--EEEEeCCC
Q psy1859 69 YPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ--EYNTFATGGSDGY--VNIWDGFN 140 (162)
Q Consensus 69 ~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~--~~~~l~~~~~d~~--i~iwd~~~ 140 (162)
.+|.++.|..+--++++--...-+.+.|+.+.+..+.+..-.-+-.+- .|| +++++-.|..+|. |.++|+.+
T Consensus 428 ERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGfS~YLHpigen~~lGvG~~~g~vKiSLFdiSd 504 (603)
T COG4880 428 ERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGFSEYLHPIGENRLLGVGAYQGGVKISLFDISD 504 (603)
T ss_pred ceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCchhhccccCCCcEEEeecccCCceEEEEeccC
Confidence 479999998877778877766778888988765444332211111222 566 5667777777775 55777754
No 495
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=64.82 E-value=11 Score=18.81 Aligned_cols=11 Identities=9% Similarity=0.217 Sum_probs=8.2
Q ss_pred EcCCCCEEEEe
Q psy1859 117 FHQEYNTFATG 127 (162)
Q Consensus 117 ~~~~~~~l~~~ 127 (162)
.+++|++++.|
T Consensus 38 ~~~dg~yli~G 48 (57)
T PF10411_consen 38 VDEDGRYLIQG 48 (57)
T ss_dssp EETTSSEEEES
T ss_pred EcCCCCEEEEe
Confidence 56778888776
No 496
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=64.44 E-value=42 Score=22.83 Aligned_cols=69 Identities=13% Similarity=0.175 Sum_probs=42.8
Q ss_pred cceeceEEEEecC------CC-CEEEEecCCCeEEEEeCCCccceeeeeeccccee--EE--Ec-CCCCEEEEecCCCeE
Q psy1859 66 EKIYPVNAISFHQ------EY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGIT--SL--FH-QEYNTFATGGSDGYV 133 (162)
Q Consensus 66 ~~~~~v~~~~~~p------~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~--~~--~~-~~~~~l~~~~~d~~i 133 (162)
.....|+||+--. +. ..++.|+.++.|.+.|...-..+..+.-..-++. .. |. -|. .+++++.||.|
T Consensus 174 ~~~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdy-RI~Va~Rdg~i 252 (257)
T PF14779_consen 174 KRQTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDY-RIVVACRDGKI 252 (257)
T ss_pred ccCceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccce-EEEEEeCCCEE
Confidence 3444677776532 22 5799999999999999887665555543322221 22 54 343 45666688877
Q ss_pred EE
Q psy1859 134 NI 135 (162)
Q Consensus 134 ~i 135 (162)
++
T Consensus 253 y~ 254 (257)
T PF14779_consen 253 YT 254 (257)
T ss_pred EE
Confidence 65
No 497
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=64.29 E-value=23 Score=19.66 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=25.1
Q ss_pred ecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEe
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATG 127 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~ 127 (162)
+..+|.+..||..+++....+.+ -.....+ +++|+.+++.+
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~-L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDG-LYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEE-ESSEEEEEE-TTSSEEEEE
T ss_pred CCCCcCEEEEECCCCeEEEehhC-CCccCeEEEcCCCCEEEEE
Confidence 45578899999988754333332 2355667 89999977666
No 498
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=64.00 E-value=48 Score=23.34 Aligned_cols=119 Identities=10% Similarity=0.086 Sum_probs=65.0
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCcc---cceeeeeeeeeeeccCcccceeceEEEEecCCC------------C
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPE---MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY------------N 81 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~------------~ 81 (162)
.-|+++|.+.+-++....+...+|+-+.... ....+.++..... .......+.+.|+... .
T Consensus 26 WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~----~~~~~~PTGiVfN~~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 26 WGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPP----LAAEGTPTGQVFNGSDTFVVSGEGITGPS 101 (336)
T ss_pred ceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCC----CCCCCCccEEEEeCCCceEEcCCCcccce
Confidence 4488999888777777778889966652210 0122222221111 0011246677776432 2
Q ss_pred EEEEecCCCeEEEEeCCCccc-----eeeeeec-cccee-EE-EcC--CCCEEEEec-CCCeEEEEeCC
Q psy1859 82 TFATGGSDGYVNIWDGFNKKR-----LCQFHRY-DTGIT-SL-FHQ--EYNTFATGG-SDGYVNIWDGF 139 (162)
Q Consensus 82 ~l~~~~~d~~v~~wd~~~~~~-----~~~~~~~-~~~v~-~~-~~~--~~~~l~~~~-~d~~i~iwd~~ 139 (162)
.++.++.||+|.-|...-... ...+... ...++ .+ +.. .+.+|..+. ..++|.++|-.
T Consensus 102 ~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~ 170 (336)
T TIGR03118 102 RFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGS 170 (336)
T ss_pred eEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCc
Confidence 367888999999998543221 1122211 22332 22 332 356666665 56788888753
No 499
>KOG3611|consensus
Probab=63.89 E-value=75 Score=25.46 Aligned_cols=74 Identities=12% Similarity=0.219 Sum_probs=43.6
Q ss_pred cccEEEEEEe----eCCCe--EEEEcCCCcEEEEEecCCcc--cce-eeeeeeeeeeccCcccceeceEEEEecCCCCEE
Q psy1859 13 KFQTRCIKCF----PNKQG--YVLSSIEGRAAVEYLDTGPE--MQK-MKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF 83 (162)
Q Consensus 13 ~~~~~~i~~~----~~~~~--l~~~~~~g~i~i~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l 83 (162)
+...+.|+.. .++.+ +..|+++|+|.- .+..... ... .+..+..-+ +..+|..|.+++....|
T Consensus 407 ~~~~t~I~Vd~~~~~~~~ydVlflGTd~G~vlK-vV~~~~~~~~~~~llEElqvf~-------~~~pI~~m~Ls~~~~~L 478 (737)
T KOG3611|consen 407 DYRLTQIVVDRVAGLDGNYDVLFLGTDAGTVLK-VVSPGKESGKSNVLLEELQVFP-------DAEPIRSMQLSSKRGSL 478 (737)
T ss_pred cceEEEEEEEEecCCCCcEEEEEEecCCCeEEE-EEecCCccCccceeEEEEeecC-------CCCceeEEEecccCCeE
Confidence 3444556555 44444 667888998662 1332221 111 122222222 22479999999999889
Q ss_pred EEecCCCeEEE
Q psy1859 84 ATGGSDGYVNI 94 (162)
Q Consensus 84 ~~~~~d~~v~~ 94 (162)
.+++..+.+++
T Consensus 479 yVgs~~gV~qv 489 (737)
T KOG3611|consen 479 YVGSRSGVVQV 489 (737)
T ss_pred EEEccCcEEEe
Confidence 99999888766
No 500
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=63.59 E-value=43 Score=22.59 Aligned_cols=71 Identities=11% Similarity=0.123 Sum_probs=39.6
Q ss_pred cCCCCEEEEecCCC-eEEEEeCCCc--ccee--eeee----cc-cceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeee
Q psy1859 77 HQEYNTFATGGSDG-YVNIWDGFNK--KRLC--QFHR----YD-TGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLC 145 (162)
Q Consensus 77 ~p~~~~l~~~~~d~-~v~~wd~~~~--~~~~--~~~~----~~-~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 145 (162)
-|+|+.|+.|+.+. ...+|.-+.. .... .+.. .. ..--.+ ..|+|++++.+..+. .|||..+.+.+.
T Consensus 126 L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~ 203 (243)
T PF07250_consen 126 LPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVR 203 (243)
T ss_pred CCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEe
Confidence 46788888887664 3445554221 1111 1110 01 111133 678999999998764 556887777666
Q ss_pred eecc
Q psy1859 146 QFHR 149 (162)
Q Consensus 146 ~~~~ 149 (162)
.+..
T Consensus 204 ~lP~ 207 (243)
T PF07250_consen 204 TLPD 207 (243)
T ss_pred eCCC
Confidence 6643
Done!