Query psy1859
Match_columns 162
No_of_seqs 239 out of 1176
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 18:07:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.2E-29 4.1E-34 170.0 18.4 148 1-161 1-150 (304)
2 3ow8_A WD repeat-containing pr 100.0 5.5E-29 1.9E-33 168.1 19.3 137 13-162 164-301 (321)
3 1vyh_C Platelet-activating fac 100.0 2.9E-28 1E-32 169.4 17.8 140 10-162 105-245 (410)
4 4ery_A WD repeat-containing pr 100.0 2E-27 6.9E-32 159.4 20.0 140 10-162 20-160 (312)
5 4gqb_B Methylosome protein 50; 100.0 1.1E-27 3.9E-32 163.0 19.0 139 11-162 125-268 (344)
6 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-27 5E-32 162.5 18.8 138 14-162 17-161 (345)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-27 4.8E-32 162.6 18.3 142 10-162 58-205 (345)
8 2hes_X YDR267CP; beta-propelle 100.0 1.6E-27 5.5E-32 161.4 18.5 142 12-162 57-208 (330)
9 3ow8_A WD repeat-containing pr 100.0 1.3E-27 4.5E-32 161.3 17.4 137 13-162 122-259 (321)
10 4gqb_B Methylosome protein 50; 100.0 4.7E-27 1.6E-31 160.0 19.5 141 10-162 166-310 (344)
11 1got_B GT-beta; complex (GTP-b 100.0 6.4E-27 2.2E-31 159.0 19.5 139 11-162 182-323 (340)
12 1vyh_C Platelet-activating fac 100.0 5.4E-27 1.8E-31 163.0 18.5 140 10-162 147-287 (410)
13 3frx_A Guanine nucleotide-bind 100.0 1.6E-26 5.6E-31 155.8 19.9 144 9-162 13-159 (319)
14 2pbi_B Guanine nucleotide-bind 100.0 1.7E-26 5.8E-31 157.8 19.7 150 9-162 60-251 (354)
15 2pm7_B Protein transport prote 100.0 1.6E-26 5.5E-31 154.4 18.4 143 9-162 5-156 (297)
16 4g56_B MGC81050 protein; prote 100.0 2.9E-26 1E-30 156.8 19.4 146 11-161 137-321 (357)
17 1got_B GT-beta; complex (GTP-b 100.0 2.4E-26 8.2E-31 156.2 18.8 141 12-162 96-237 (340)
18 1nr0_A Actin interacting prote 100.0 2.7E-26 9.4E-31 166.5 20.1 152 9-162 55-250 (611)
19 2hes_X YDR267CP; beta-propelle 100.0 1.6E-26 5.5E-31 156.5 17.6 144 10-162 104-261 (330)
20 3bg1_A Protein SEC13 homolog; 100.0 4.4E-27 1.5E-31 158.4 14.6 149 3-162 3-161 (316)
21 2ynn_A Coatomer subunit beta'; 99.9 9.2E-26 3.1E-30 151.2 19.9 142 9-162 136-281 (304)
22 2xzm_R RACK1; ribosome, transl 99.9 8.9E-26 3E-30 153.5 20.0 145 9-162 17-173 (343)
23 2ymu_A WD-40 repeat protein; u 99.9 7.2E-26 2.5E-30 162.7 19.3 137 10-162 423-560 (577)
24 3f3f_A Nucleoporin SEH1; struc 99.9 4.5E-26 1.5E-30 153.8 17.2 149 5-162 3-178 (351)
25 4g56_B MGC81050 protein; prote 99.9 3E-26 1E-30 156.7 16.4 141 10-162 39-192 (357)
26 2pm7_B Protein transport prote 99.9 1.9E-25 6.4E-30 149.2 18.7 142 10-162 50-215 (297)
27 4ery_A WD repeat-containing pr 99.9 2.9E-25 1E-29 148.9 19.7 141 9-162 61-203 (312)
28 2pbi_B Guanine nucleotide-bind 99.9 2.7E-25 9.4E-30 151.8 19.5 139 11-162 194-337 (354)
29 2aq5_A Coronin-1A; WD40 repeat 99.9 1.3E-25 4.4E-30 155.5 18.0 143 11-162 79-231 (402)
30 3frx_A Guanine nucleotide-bind 99.9 3.5E-25 1.2E-29 149.3 19.5 138 11-162 63-207 (319)
31 1nr0_A Actin interacting prote 99.9 1.8E-25 6.1E-30 162.2 19.2 139 11-162 145-335 (611)
32 3iz6_a 40S ribosomal protein R 99.9 1.5E-25 5.3E-30 154.3 17.3 140 11-162 203-355 (380)
33 4e54_B DNA damage-binding prot 99.9 6.2E-26 2.1E-30 158.6 15.3 141 10-162 116-261 (435)
34 1erj_A Transcriptional repress 99.9 4.5E-25 1.5E-29 152.6 19.4 134 15-162 125-267 (393)
35 3dwl_C Actin-related protein 2 99.9 1.1E-26 3.7E-31 159.3 10.1 140 12-162 10-157 (377)
36 3mkq_A Coatomer beta'-subunit; 99.9 3.4E-25 1.2E-29 164.6 18.0 146 3-161 3-150 (814)
37 4h5i_A Guanine nucleotide-exch 99.9 3.9E-25 1.3E-29 151.6 16.8 139 12-162 175-323 (365)
38 3jrp_A Fusion protein of prote 99.9 7.4E-25 2.5E-29 149.7 17.7 143 8-161 6-157 (379)
39 2xzm_R RACK1; ribosome, transl 99.9 3E-24 1E-28 146.0 19.9 139 10-162 73-224 (343)
40 1sq9_A Antiviral protein SKI8; 99.9 1.8E-24 6.2E-29 149.0 17.7 141 11-162 184-365 (397)
41 1k8k_C P40, ARP2/3 complex 41 99.9 1.7E-24 5.8E-29 147.8 17.4 144 10-162 93-255 (372)
42 1gxr_A ESG1, transducin-like e 99.9 5.6E-24 1.9E-28 143.3 19.6 140 11-162 95-235 (337)
43 2ymu_A WD-40 repeat protein; u 99.9 2.2E-24 7.6E-29 155.0 18.5 139 8-162 11-150 (577)
44 2j04_B YDR362CP, TAU91; beta p 99.9 7.4E-25 2.5E-29 156.3 15.7 138 12-162 265-408 (524)
45 3dwl_C Actin-related protein 2 99.9 5.3E-25 1.8E-29 150.9 14.3 141 11-162 53-216 (377)
46 3vl1_A 26S proteasome regulato 99.9 1.2E-24 4E-29 151.0 15.9 140 10-162 136-301 (420)
47 3ei3_B DNA damage-binding prot 99.9 3.8E-24 1.3E-28 147.1 18.3 141 9-162 69-215 (383)
48 1gxr_A ESG1, transducin-like e 99.9 6.5E-24 2.2E-28 143.0 19.1 143 11-162 49-194 (337)
49 3iz6_a 40S ribosomal protein R 99.9 1.6E-24 5.3E-29 149.3 16.3 150 9-162 62-260 (380)
50 3mmy_A MRNA export factor; mRN 99.9 5.9E-24 2E-28 144.7 18.8 141 8-162 81-326 (368)
51 1erj_A Transcriptional repress 99.9 6.7E-24 2.3E-28 146.7 19.2 144 12-161 205-362 (393)
52 3dm0_A Maltose-binding peripla 99.9 4.9E-24 1.7E-28 156.6 19.4 145 9-162 378-528 (694)
53 3sfz_A APAF-1, apoptotic pepti 99.9 4.6E-24 1.6E-28 164.6 20.1 140 10-162 612-754 (1249)
54 3k26_A Polycomb protein EED; W 99.9 8.2E-24 2.8E-28 144.0 19.1 148 7-162 12-172 (366)
55 4h5i_A Guanine nucleotide-exch 99.9 2.9E-24 9.9E-29 147.3 16.5 122 11-141 217-344 (365)
56 3f3f_A Nucleoporin SEH1; struc 99.9 7.5E-24 2.6E-28 142.9 18.3 144 10-162 54-317 (351)
57 3lrv_A PRE-mRNA-splicing facto 99.9 1.9E-24 6.6E-29 146.8 15.3 140 10-162 122-271 (343)
58 3dm0_A Maltose-binding peripla 99.9 5.6E-24 1.9E-28 156.3 18.6 141 9-162 426-572 (694)
59 4aez_A CDC20, WD repeat-contai 99.9 1.1E-23 3.8E-28 145.8 18.9 138 10-162 131-270 (401)
60 3bg1_A Protein SEC13 homolog; 99.9 1E-24 3.4E-29 146.9 12.6 141 11-162 55-223 (316)
61 3ei3_B DNA damage-binding prot 99.9 1E-23 3.6E-28 144.9 17.1 138 11-161 116-260 (383)
62 3jrp_A Fusion protein of prote 99.9 2.8E-23 9.7E-28 141.9 19.1 142 10-162 52-217 (379)
63 2oaj_A Protein SNI1; WD40 repe 99.9 8.4E-24 2.9E-28 159.1 17.7 138 9-162 13-162 (902)
64 2xyi_A Probable histone-bindin 99.9 1.9E-23 6.4E-28 146.0 18.3 143 11-162 179-332 (430)
65 1k8k_C P40, ARP2/3 complex 41 99.9 2.4E-23 8E-28 142.2 18.3 142 10-162 49-213 (372)
66 3zwl_B Eukaryotic translation 99.9 4.4E-23 1.5E-27 140.4 19.6 140 9-162 28-229 (369)
67 4e54_B DNA damage-binding prot 99.9 1.8E-24 6E-29 151.3 12.9 140 11-162 162-307 (435)
68 3mmy_A MRNA export factor; mRN 99.9 3.9E-23 1.3E-27 140.6 19.0 141 8-161 34-180 (368)
69 2oaj_A Protein SNI1; WD40 repe 99.9 1.7E-24 5.8E-29 162.9 13.1 142 16-160 438-631 (902)
70 2pm9_A Protein WEB1, protein t 99.9 9.5E-24 3.3E-28 146.1 16.0 143 11-162 65-225 (416)
71 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.7E-23 5.9E-28 146.8 17.5 140 12-160 101-250 (450)
72 3dw8_B Serine/threonine-protei 99.9 1.1E-23 3.6E-28 147.2 16.2 150 12-162 27-237 (447)
73 1r5m_A SIR4-interacting protei 99.9 2.2E-23 7.6E-28 144.2 17.4 138 11-162 245-405 (425)
74 3k26_A Polycomb protein EED; W 99.9 6.8E-24 2.3E-28 144.4 14.5 137 12-161 68-241 (366)
75 3vl1_A 26S proteasome regulato 99.9 4.3E-23 1.5E-27 143.1 18.4 131 17-160 101-235 (420)
76 3jro_A Fusion protein of prote 99.9 1.2E-23 4E-28 155.9 16.4 143 8-161 4-155 (753)
77 3gre_A Serine/threonine-protei 99.9 5.4E-23 1.9E-27 143.5 18.9 150 11-161 109-267 (437)
78 4a11_B DNA excision repair pro 99.9 1.2E-22 4.2E-27 139.9 20.4 153 7-162 37-197 (408)
79 3odt_A Protein DOA1; ubiquitin 99.9 9.5E-23 3.2E-27 136.1 18.7 136 11-162 140-277 (313)
80 2aq5_A Coronin-1A; WD40 repeat 99.9 1.8E-23 6.3E-28 144.7 15.3 139 15-162 36-187 (402)
81 2oit_A Nucleoporin 214KDA; NH2 99.9 2E-23 6.8E-28 146.1 15.0 144 12-162 91-251 (434)
82 2pm9_A Protein WEB1, protein t 99.9 2.3E-23 7.9E-28 144.2 15.3 145 11-162 163-316 (416)
83 1r5m_A SIR4-interacting protei 99.9 2E-22 6.8E-27 139.5 19.4 148 10-162 146-341 (425)
84 3gre_A Serine/threonine-protei 99.9 7.1E-23 2.4E-27 142.9 17.1 143 10-162 60-225 (437)
85 1sq9_A Antiviral protein SKI8; 99.9 7.1E-23 2.4E-27 141.1 16.7 145 13-162 121-302 (397)
86 2j04_A TAU60, YPL007P, hypothe 99.9 3E-23 1E-27 147.2 15.0 135 13-160 85-235 (588)
87 2j04_B YDR362CP, TAU91; beta p 99.9 1.9E-23 6.4E-28 149.1 14.0 141 12-162 206-366 (524)
88 1pgu_A Actin interacting prote 99.9 6.5E-23 2.2E-27 148.0 17.0 137 12-162 445-595 (615)
89 1yfq_A Cell cycle arrest prote 99.9 2.9E-23 9.8E-28 140.4 14.3 141 9-162 7-161 (342)
90 2j04_A TAU60, YPL007P, hypothe 99.9 8.7E-24 3E-28 149.9 11.7 147 11-162 13-193 (588)
91 4aow_A Guanine nucleotide-bind 99.9 4.7E-22 1.6E-26 134.2 19.8 144 10-162 35-182 (340)
92 3dw8_B Serine/threonine-protei 99.9 5.8E-23 2E-27 143.4 15.7 147 14-162 94-296 (447)
93 3zwl_B Eukaryotic translation 99.9 5.7E-22 1.9E-26 134.9 20.0 135 15-162 177-326 (369)
94 2xyi_A Probable histone-bindin 99.9 7.4E-23 2.5E-27 142.9 15.8 144 10-162 125-288 (430)
95 3jro_A Fusion protein of prote 99.9 1.8E-22 6.3E-27 149.5 18.5 142 10-162 50-215 (753)
96 2w18_A PALB2, fancn, partner a 99.9 8.4E-23 2.9E-27 137.2 14.6 137 15-162 180-337 (356)
97 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.9E-22 6.6E-27 141.5 17.1 142 11-162 147-318 (450)
98 3lrv_A PRE-mRNA-splicing facto 99.9 2.1E-23 7.3E-28 141.7 11.9 96 67-162 124-225 (343)
99 1pgu_A Actin interacting prote 99.9 3.1E-22 1.1E-26 144.5 17.9 143 9-162 59-217 (615)
100 3i2n_A WD repeat-containing pr 99.9 2.3E-22 7.9E-27 136.5 15.9 134 15-162 166-332 (357)
101 4ggc_A P55CDC, cell division c 99.9 1.1E-21 3.9E-26 131.2 18.8 147 12-162 66-295 (318)
102 4aez_A CDC20, WD repeat-contai 99.9 5.8E-22 2E-26 137.2 17.7 140 9-162 213-360 (401)
103 3i2n_A WD repeat-containing pr 99.9 7E-22 2.4E-26 134.1 17.5 144 4-159 9-172 (357)
104 4aow_A Guanine nucleotide-bind 99.9 3.6E-21 1.2E-25 129.9 20.0 152 10-162 83-267 (340)
105 3mkq_A Coatomer beta'-subunit; 99.9 1E-21 3.5E-26 146.0 18.8 141 10-162 94-239 (814)
106 4gga_A P55CDC, cell division c 99.9 2.8E-21 9.7E-26 134.5 19.8 143 10-162 227-375 (420)
107 1yfq_A Cell cycle arrest prote 99.9 1.4E-21 4.8E-26 132.1 16.9 134 12-158 149-301 (342)
108 4gq1_A NUP37; propeller, trans 99.9 1.9E-22 6.6E-27 139.5 12.0 116 19-143 95-221 (393)
109 3v7d_B Cell division control p 99.9 4.5E-21 1.5E-25 134.7 18.7 141 10-161 200-362 (464)
110 3odt_A Protein DOA1; ubiquitin 99.9 9.9E-21 3.4E-25 126.3 18.7 137 7-161 12-152 (313)
111 3sfz_A APAF-1, apoptotic pepti 99.9 5.6E-21 1.9E-25 147.6 18.8 123 11-146 655-780 (1249)
112 4gq1_A NUP37; propeller, trans 99.9 1.5E-21 5.3E-26 134.9 13.5 139 10-161 133-307 (393)
113 4a11_B DNA excision repair pro 99.9 1.6E-20 5.5E-25 129.4 17.8 137 12-162 98-256 (408)
114 3v7d_B Cell division control p 99.9 2.1E-20 7.1E-25 131.4 18.4 138 10-162 159-321 (464)
115 3vu4_A KMHSV2; beta-propeller 99.9 3.3E-20 1.1E-24 126.7 17.2 75 67-141 194-272 (355)
116 4gga_A P55CDC, cell division c 99.9 1.2E-20 4E-25 131.4 14.7 131 9-153 272-408 (420)
117 3vu4_A KMHSV2; beta-propeller 99.9 3.1E-20 1.1E-24 126.8 16.5 77 86-162 155-251 (355)
118 1p22_A F-BOX/WD-repeat protein 99.8 3.6E-19 1.2E-23 124.4 18.5 132 11-161 171-306 (435)
119 1p22_A F-BOX/WD-repeat protein 99.8 8.7E-20 3E-24 127.5 14.8 134 9-161 252-395 (435)
120 4ggc_A P55CDC, cell division c 99.8 1.6E-19 5.6E-24 120.8 15.4 134 15-162 27-161 (318)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.8 5.4E-19 1.8E-23 123.8 17.9 125 20-161 124-249 (445)
122 2oit_A Nucleoporin 214KDA; NH2 99.8 9.5E-20 3.2E-24 127.6 12.5 143 15-162 38-203 (434)
123 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.7E-18 5.8E-23 121.2 18.6 131 11-160 157-288 (445)
124 1l0q_A Surface layer protein; 99.8 9.4E-18 3.2E-22 115.4 19.6 134 13-162 31-168 (391)
125 1l0q_A Surface layer protein; 99.8 1.1E-17 3.8E-22 115.1 19.8 134 13-162 73-210 (391)
126 3bws_A Protein LP49; two-domai 99.8 7.2E-19 2.5E-23 122.4 13.8 140 14-162 123-264 (433)
127 2w18_A PALB2, fancn, partner a 99.8 2.5E-18 8.5E-23 115.7 14.9 121 15-147 113-276 (356)
128 2hqs_A Protein TOLB; TOLB, PAL 99.8 1E-17 3.4E-22 116.7 18.1 135 12-162 177-321 (415)
129 3bws_A Protein LP49; two-domai 99.8 6.9E-18 2.4E-22 117.5 16.6 136 12-162 168-313 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.8E-17 6.3E-22 115.4 16.4 137 11-162 264-408 (415)
131 2ojh_A Uncharacterized protein 99.8 1.3E-17 4.4E-22 110.1 12.0 136 15-162 130-282 (297)
132 2ecf_A Dipeptidyl peptidase IV 99.7 6.8E-17 2.3E-21 119.4 14.7 145 14-162 37-219 (741)
133 1ri6_A Putative isomerase YBHE 99.7 3.6E-16 1.2E-20 105.4 14.1 139 13-162 37-188 (343)
134 1xfd_A DIP, dipeptidyl aminope 99.7 9.3E-17 3.2E-21 118.3 11.4 135 16-162 63-265 (723)
135 2ojh_A Uncharacterized protein 99.7 4E-16 1.4E-20 103.0 12.9 136 14-162 85-227 (297)
136 1k32_A Tricorn protease; prote 99.7 1.7E-15 5.7E-20 116.0 15.9 132 15-162 339-482 (1045)
137 1nir_A Nitrite reductase; hemo 99.7 2.3E-15 7.7E-20 108.2 15.5 128 20-162 144-290 (543)
138 1xfd_A DIP, dipeptidyl aminope 99.7 8.3E-17 2.8E-21 118.6 7.7 137 13-162 16-183 (723)
139 3vgz_A Uncharacterized protein 99.7 1.2E-14 4E-19 98.5 17.2 144 15-162 90-241 (353)
140 3scy_A Hypothetical bacterial 99.7 1.5E-14 5.3E-19 98.6 17.3 140 14-162 155-316 (361)
141 3vgz_A Uncharacterized protein 99.7 2.6E-14 9E-19 96.8 17.4 137 12-162 39-195 (353)
142 1z68_A Fibroblast activation p 99.7 2.9E-16 9.9E-21 115.8 8.2 132 16-162 62-263 (719)
143 1nir_A Nitrite reductase; hemo 99.6 3.4E-14 1.2E-18 102.1 18.1 134 16-162 181-334 (543)
144 3hfq_A Uncharacterized protein 99.6 5.4E-14 1.9E-18 95.4 18.0 139 15-162 142-296 (347)
145 3scy_A Hypothetical bacterial 99.6 5.7E-14 2E-18 95.8 18.2 139 13-160 210-360 (361)
146 2ecf_A Dipeptidyl peptidase IV 99.6 2.6E-15 8.8E-20 111.0 11.4 133 16-162 111-296 (741)
147 1k32_A Tricorn protease; prote 99.6 6.6E-15 2.3E-19 112.7 12.8 132 15-162 297-431 (1045)
148 2z3z_A Dipeptidyl aminopeptida 99.6 5.4E-15 1.8E-19 108.9 11.6 132 14-162 82-268 (706)
149 3hfq_A Uncharacterized protein 99.6 6.3E-14 2.1E-18 95.1 15.9 136 15-162 41-197 (347)
150 2z3z_A Dipeptidyl aminopeptida 99.6 5.2E-15 1.8E-19 108.9 11.3 138 16-162 183-366 (706)
151 1ri6_A Putative isomerase YBHE 99.6 1.7E-13 5.6E-18 92.4 17.6 144 14-162 178-333 (343)
152 3u4y_A Uncharacterized protein 99.6 1.1E-13 3.9E-18 93.1 16.6 128 20-162 4-138 (331)
153 3u4y_A Uncharacterized protein 99.6 1.2E-13 4.2E-18 92.9 16.3 132 18-162 44-186 (331)
154 3o4h_A Acylamino-acid-releasin 99.6 1.8E-14 6.2E-19 104.1 11.8 128 17-162 113-256 (582)
155 1z68_A Fibroblast activation p 99.6 1.3E-14 4.3E-19 107.1 10.5 131 17-162 19-179 (719)
156 1jmx_B Amine dehydrogenase; ox 99.6 3.1E-14 1.1E-18 96.2 10.9 131 19-162 5-158 (349)
157 3o4h_A Acylamino-acid-releasin 99.6 5.4E-14 1.9E-18 101.6 12.6 124 17-160 153-291 (582)
158 3pe7_A Oligogalacturonate lyas 99.5 1.9E-13 6.4E-18 93.9 12.9 132 19-162 41-199 (388)
159 1pby_B Quinohemoprotein amine 99.5 2.9E-13 9.9E-18 91.0 13.1 124 26-162 2-145 (337)
160 4a5s_A Dipeptidyl peptidase 4 99.5 1.2E-13 4.1E-18 102.5 11.9 121 13-145 16-146 (740)
161 1pby_B Quinohemoprotein amine 99.5 3.1E-13 1.1E-17 90.8 12.9 125 15-150 35-173 (337)
162 3azo_A Aminopeptidase; POP fam 99.5 2.9E-13 9.8E-18 99.1 13.6 139 13-162 129-304 (662)
163 1jmx_B Amine dehydrogenase; ox 99.5 9.2E-13 3.2E-17 89.0 14.5 129 16-162 94-305 (349)
164 1jof_A Carboxy-CIS,CIS-muconat 99.5 3.8E-13 1.3E-17 92.1 12.7 136 15-162 41-203 (365)
165 4a5s_A Dipeptidyl peptidase 4 99.5 6.2E-13 2.1E-17 98.7 12.6 132 18-162 66-270 (740)
166 1xip_A Nucleoporin NUP159; bet 99.5 4.2E-12 1.4E-16 87.4 15.4 128 10-162 85-224 (388)
167 3azo_A Aminopeptidase; POP fam 99.5 1.5E-12 5.2E-17 95.2 13.2 136 18-162 81-252 (662)
168 2oiz_A Aromatic amine dehydrog 99.4 2.1E-11 7.1E-16 83.5 16.7 87 73-162 258-358 (361)
169 1jof_A Carboxy-CIS,CIS-muconat 99.4 1.6E-11 5.3E-16 84.1 15.1 138 17-162 86-265 (365)
170 1q7f_A NHL, brain tumor CG1071 99.4 8.3E-11 2.9E-15 77.7 17.2 135 14-162 121-261 (286)
171 3fvz_A Peptidyl-glycine alpha- 99.4 1.8E-10 6.1E-15 77.8 19.0 143 15-161 92-250 (329)
172 3fvz_A Peptidyl-glycine alpha- 99.4 1.9E-10 6.4E-15 77.7 17.2 136 14-162 24-206 (329)
173 2xdw_A Prolyl endopeptidase; a 99.4 2.3E-11 7.9E-16 89.9 13.7 132 15-161 126-295 (710)
174 1xip_A Nucleoporin NUP159; bet 99.4 2E-11 7E-16 84.0 12.3 131 15-162 39-173 (388)
175 2gop_A Trilobed protease; beta 99.3 7.4E-11 2.5E-15 79.9 14.8 89 70-162 60-181 (347)
176 2gop_A Trilobed protease; beta 99.3 5.4E-11 1.8E-15 80.5 13.4 101 14-130 59-190 (347)
177 3c5m_A Oligogalacturonate lyas 99.3 5E-11 1.7E-15 81.8 11.8 136 13-162 187-361 (396)
178 2bkl_A Prolyl endopeptidase; m 99.3 5.8E-11 2E-15 87.6 12.7 137 21-162 75-237 (695)
179 3c5m_A Oligogalacturonate lyas 99.3 5.3E-12 1.8E-16 86.7 6.8 134 16-161 38-197 (396)
180 3pe7_A Oligogalacturonate lyas 99.3 2.1E-10 7.2E-15 78.7 13.9 130 18-162 85-248 (388)
181 2dg1_A DRP35, lactonase; beta 99.3 1.7E-09 5.9E-14 72.8 18.1 134 15-162 46-192 (333)
182 2bkl_A Prolyl endopeptidase; m 99.3 1.2E-10 4.1E-15 86.0 12.3 131 15-159 122-279 (695)
183 3e5z_A Putative gluconolactona 99.2 2.3E-09 7.8E-14 71.2 16.8 131 15-162 29-182 (296)
184 3g4e_A Regucalcin; six bladed 99.2 2.1E-09 7.2E-14 71.6 16.6 135 15-162 99-252 (297)
185 2dg1_A DRP35, lactonase; beta 99.2 1E-10 3.6E-15 78.8 10.2 131 16-162 8-145 (333)
186 2xdw_A Prolyl endopeptidase; a 99.2 4.4E-10 1.5E-14 83.2 14.2 135 22-162 80-243 (710)
187 3e5z_A Putative gluconolactona 99.2 4E-09 1.4E-13 70.0 16.6 138 13-162 68-228 (296)
188 1rwi_B Serine/threonine-protei 99.2 2.3E-09 7.8E-14 70.1 15.1 136 14-162 108-244 (270)
189 1q7f_A NHL, brain tumor CG1071 99.2 3.5E-09 1.2E-13 69.8 16.1 133 15-162 78-217 (286)
190 1qks_A Cytochrome CD1 nitrite 99.2 2.3E-09 7.8E-14 77.5 16.1 111 23-148 165-283 (567)
191 1qks_A Cytochrome CD1 nitrite 99.2 7.5E-09 2.6E-13 74.9 17.8 122 15-148 198-381 (567)
192 3dsm_A Uncharacterized protein 99.2 3.7E-09 1.3E-13 71.4 14.8 139 14-162 84-235 (328)
193 2oiz_A Aromatic amine dehydrog 99.1 1.9E-09 6.4E-14 73.9 13.0 108 24-146 14-146 (361)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1.1E-08 3.7E-13 68.2 15.6 135 15-162 118-278 (314)
195 1rwi_B Serine/threonine-protei 99.1 6E-09 2E-13 68.0 14.0 134 15-162 68-202 (270)
196 3no2_A Uncharacterized protein 99.1 2.2E-08 7.7E-13 66.1 16.4 125 14-148 77-203 (276)
197 1yr2_A Prolyl oligopeptidase; 99.1 3.5E-09 1.2E-13 78.8 13.8 129 15-156 164-321 (741)
198 2ghs_A AGR_C_1268P; regucalcin 99.1 4.8E-08 1.7E-12 65.9 18.3 133 15-162 135-282 (326)
199 3no2_A Uncharacterized protein 99.1 1.5E-08 5.1E-13 66.9 15.1 129 15-161 38-174 (276)
200 2z2n_A Virginiamycin B lyase; 99.1 8.3E-08 2.8E-12 63.3 18.8 133 14-162 15-151 (299)
201 1yr2_A Prolyl oligopeptidase; 99.0 7.7E-09 2.6E-13 77.0 13.0 135 21-162 114-278 (741)
202 2z2n_A Virginiamycin B lyase; 99.0 1.7E-07 5.7E-12 61.9 17.3 134 14-162 57-193 (299)
203 3sjl_D Methylamine dehydrogena 99.0 1.5E-08 5E-13 69.8 12.2 114 20-148 39-177 (386)
204 3dsm_A Uncharacterized protein 98.9 1.4E-07 4.7E-12 63.7 15.6 129 16-162 46-182 (328)
205 2qe8_A Uncharacterized protein 98.9 2.8E-07 9.7E-12 62.6 15.7 128 14-148 17-162 (343)
206 2qc5_A Streptogramin B lactona 98.9 1.3E-06 4.5E-11 57.5 17.8 133 14-162 20-156 (300)
207 3hrp_A Uncharacterized protein 98.8 2.2E-07 7.4E-12 64.8 14.4 132 15-161 132-276 (409)
208 2qc5_A Streptogramin B lactona 98.8 1.6E-06 5.5E-11 57.1 17.8 134 14-162 62-198 (300)
209 3iuj_A Prolyl endopeptidase; h 98.8 2.8E-07 9.5E-12 68.3 14.7 128 15-155 130-284 (693)
210 2mad_H Methylamine dehydrogena 98.8 4.2E-07 1.4E-11 62.6 14.4 112 21-148 28-165 (373)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 1.2E-06 3.9E-11 58.3 16.1 116 16-140 174-299 (314)
212 3c75_H MADH, methylamine dehyd 98.8 1.2E-07 4.1E-12 66.2 11.4 112 23-149 82-218 (426)
213 3dr2_A Exported gluconolactona 98.8 1.4E-06 4.9E-11 58.1 16.3 130 15-162 46-198 (305)
214 3dr2_A Exported gluconolactona 98.7 1.7E-06 5.9E-11 57.7 15.2 115 14-141 86-225 (305)
215 3g4e_A Regucalcin; six bladed 98.7 8.6E-07 2.9E-11 58.9 13.7 104 16-128 151-260 (297)
216 2mad_H Methylamine dehydrogena 98.7 4.4E-06 1.5E-10 57.5 16.9 76 71-147 269-357 (373)
217 3sjl_D Methylamine dehydrogena 98.7 1.6E-06 5.6E-11 59.8 14.6 90 71-162 282-384 (386)
218 2ghs_A AGR_C_1268P; regucalcin 98.7 7.2E-06 2.5E-10 55.3 17.4 115 13-141 89-213 (326)
219 3hrp_A Uncharacterized protein 98.7 3.1E-06 1.1E-10 58.9 15.8 137 14-162 219-390 (409)
220 3iuj_A Prolyl endopeptidase; h 98.7 1.8E-06 6.3E-11 63.9 14.9 133 17-161 178-335 (693)
221 3c75_H MADH, methylamine dehyd 98.6 1.9E-06 6.7E-11 60.2 13.9 74 73-147 323-409 (426)
222 2iwa_A Glutamine cyclotransfer 98.6 7.4E-06 2.5E-10 53.7 14.7 118 16-148 23-143 (266)
223 2ece_A 462AA long hypothetical 98.5 1E-05 3.5E-10 56.7 14.9 137 23-162 93-263 (462)
224 1mda_H Methylamine dehydrogena 98.5 8.8E-06 3E-10 55.9 13.7 86 74-161 269-366 (368)
225 2hz6_A Endoplasmic reticulum t 98.5 2.3E-08 7.9E-13 68.7 0.9 111 24-149 8-120 (369)
226 2hz6_A Endoplasmic reticulum t 98.4 4.1E-07 1.4E-11 62.5 5.6 105 25-148 92-200 (369)
227 2xe4_A Oligopeptidase B; hydro 98.4 1.6E-05 5.5E-10 59.5 14.4 115 15-141 175-305 (751)
228 3nok_A Glutaminyl cyclase; bet 98.4 3.3E-05 1.1E-09 50.5 14.0 116 16-148 57-172 (268)
229 2ece_A 462AA long hypothetical 98.4 2.4E-05 8.3E-10 54.9 13.7 114 17-141 141-290 (462)
230 3nol_A Glutamine cyclotransfer 98.4 2.5E-05 8.5E-10 50.9 12.6 115 17-148 46-163 (262)
231 1npe_A Nidogen, entactin; glyc 98.4 0.00014 4.6E-09 47.5 16.5 133 15-162 123-261 (267)
232 1mda_H Methylamine dehydrogena 98.4 1.9E-06 6.6E-11 59.2 7.7 90 36-140 47-158 (368)
233 1yiq_A Quinohemoprotein alcoho 98.3 1.6E-05 5.6E-10 58.9 13.1 62 89-150 454-515 (689)
234 2qe8_A Uncharacterized protein 98.3 4.6E-05 1.6E-09 51.7 14.1 93 70-162 196-301 (343)
235 2iwa_A Glutamine cyclotransfer 98.3 0.00013 4.4E-09 47.9 15.2 122 25-162 75-216 (266)
236 3nol_A Glutamine cyclotransfer 98.3 0.00012 4.1E-09 47.7 14.8 124 22-162 93-235 (262)
237 1kb0_A Quinohemoprotein alcoho 98.3 1.8E-05 6.2E-10 58.6 12.2 60 90-150 457-517 (677)
238 1fwx_A Nitrous oxide reductase 98.2 7.7E-05 2.6E-09 54.1 14.1 132 15-162 135-341 (595)
239 3mbr_X Glutamine cyclotransfer 98.2 0.00012 4E-09 47.3 13.1 119 14-148 21-141 (243)
240 1npe_A Nidogen, entactin; glyc 98.2 0.00036 1.2E-08 45.4 17.4 135 14-162 36-177 (267)
241 1fwx_A Nitrous oxide reductase 98.1 2.2E-05 7.4E-10 56.9 9.7 70 70-140 278-361 (595)
242 3mbr_X Glutamine cyclotransfer 98.1 0.00049 1.7E-08 44.5 14.0 121 25-162 74-214 (243)
243 3nok_A Glutaminyl cyclase; bet 98.1 0.00029 9.8E-09 46.1 12.6 124 22-162 102-245 (268)
244 1kb0_A Quinohemoprotein alcoho 97.9 0.00023 7.7E-09 52.8 12.0 88 18-107 247-354 (677)
245 3tc9_A Hypothetical hydrolase; 97.9 0.0022 7.4E-08 45.1 16.2 130 17-162 140-280 (430)
246 3qqz_A Putative uncharacterize 97.9 0.0016 5.4E-08 42.5 14.2 118 8-138 21-149 (255)
247 2xe4_A Oligopeptidase B; hydro 97.8 0.0023 7.7E-08 48.1 15.2 116 17-140 224-354 (751)
248 3hxj_A Pyrrolo-quinoline quino 97.8 0.00052 1.8E-08 45.8 10.9 116 25-160 107-223 (330)
249 2ad6_A Methanol dehydrogenase 97.8 0.0007 2.4E-08 49.3 11.7 61 88-149 442-503 (571)
250 1yiq_A Quinohemoprotein alcoho 97.7 0.0018 6.1E-08 48.2 13.2 83 18-104 239-343 (689)
251 1k3i_A Galactose oxidase precu 97.7 0.0012 4E-08 48.8 12.0 117 18-143 190-326 (656)
252 1flg_A Protein (quinoprotein e 97.7 0.00078 2.7E-08 49.2 10.8 61 89-150 465-526 (582)
253 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.0023 7.8E-08 43.7 12.6 117 25-148 53-170 (376)
254 3v65_B Low-density lipoprotein 97.6 0.0075 2.6E-07 41.7 15.9 120 15-148 203-326 (386)
255 3q7m_A Lipoprotein YFGL, BAMB; 97.6 0.0043 1.5E-07 42.3 12.9 106 25-149 239-346 (376)
256 2fp8_A Strictosidine synthase; 97.5 0.0077 2.6E-07 40.3 17.6 114 15-140 81-216 (322)
257 1kv9_A Type II quinohemoprotei 97.5 0.0044 1.5E-07 46.0 13.4 61 89-150 437-498 (668)
258 3tc9_A Hypothetical hydrolase; 97.5 0.0091 3.1E-07 41.9 14.3 114 15-139 180-300 (430)
259 3v65_B Low-density lipoprotein 97.4 0.013 4.5E-07 40.5 16.9 133 16-161 118-255 (386)
260 2p9w_A MAL S 1 allergenic prot 97.4 0.012 4.2E-07 39.8 14.3 139 17-162 16-195 (334)
261 3v64_C Agrin; beta propeller, 97.4 0.015 5.2E-07 39.6 16.3 120 15-148 160-283 (349)
262 3p5b_L Low density lipoprotein 97.3 0.017 6E-07 40.1 18.5 138 15-161 113-255 (400)
263 3hxj_A Pyrrolo-quinoline quino 97.3 0.00096 3.3E-08 44.4 7.5 77 80-159 107-184 (330)
264 1w6s_A Methanol dehydrogenase 97.3 0.0071 2.4E-07 44.4 12.3 61 88-149 451-512 (599)
265 3qqz_A Putative uncharacterize 97.3 0.013 4.3E-07 38.2 17.6 143 15-162 71-234 (255)
266 4hw6_A Hypothetical protein, I 97.3 0.014 4.9E-07 41.0 13.4 130 17-162 142-283 (433)
267 3kya_A Putative phosphatase; s 97.3 0.014 4.8E-07 41.8 13.3 113 16-139 141-277 (496)
268 2fp8_A Strictosidine synthase; 97.3 0.016 5.6E-07 38.6 16.8 77 70-148 186-276 (322)
269 3v64_C Agrin; beta propeller, 97.3 0.02 6.9E-07 39.0 17.2 132 16-161 75-212 (349)
270 1ijq_A LDL receptor, low-densi 97.2 0.019 6.6E-07 38.4 17.5 136 15-162 31-174 (316)
271 3m0c_C LDL receptor, low-densi 97.2 0.046 1.6E-06 41.5 18.5 92 70-161 472-567 (791)
272 3sov_A LRP-6, low-density lipo 97.1 0.026 8.8E-07 38.0 16.6 133 16-161 37-175 (318)
273 3pbp_A Nucleoporin NUP82; beta 97.1 0.03 1E-06 39.3 12.8 116 15-135 67-207 (452)
274 2p9w_A MAL S 1 allergenic prot 97.1 0.032 1.1E-06 37.8 12.2 71 70-141 138-216 (334)
275 3pbp_A Nucleoporin NUP82; beta 97.0 0.044 1.5E-06 38.5 15.1 90 70-161 67-189 (452)
276 1kv9_A Type II quinohemoprotei 97.0 0.021 7.3E-07 42.4 12.2 85 18-104 234-338 (668)
277 2p4o_A Hypothetical protein; p 97.0 0.034 1.1E-06 36.9 16.1 113 14-141 32-148 (306)
278 4hw6_A Hypothetical protein, I 97.0 0.033 1.1E-06 39.2 12.2 70 70-139 229-303 (433)
279 1tl2_A L10, protein (tachylect 96.9 0.016 5.4E-07 37.0 9.4 108 15-134 42-157 (236)
280 1n7d_A LDL receptor, low-densi 96.9 0.006 2.1E-07 45.5 8.7 78 70-148 541-622 (699)
281 2ism_A Putative oxidoreductase 96.9 0.045 1.5E-06 37.3 12.3 103 15-128 32-153 (352)
282 3sov_A LRP-6, low-density lipo 96.8 0.053 1.8E-06 36.5 16.4 119 15-147 123-245 (318)
283 3sre_A PON1, serum paraoxonase 96.8 0.063 2.2E-06 36.8 14.0 115 14-139 112-251 (355)
284 1n7d_A LDL receptor, low-densi 96.7 0.0066 2.3E-07 45.3 7.7 134 16-161 408-549 (699)
285 2g8s_A Glucose/sorbosone dehyd 96.7 0.074 2.5E-06 36.3 12.3 107 15-128 19-148 (353)
286 2p4o_A Hypothetical protein; p 96.6 0.076 2.6E-06 35.2 11.8 72 70-143 33-107 (306)
287 1ijq_A LDL receptor, low-densi 96.5 0.091 3.1E-06 35.1 14.9 92 70-161 31-129 (316)
288 4a2l_A BT_4663, two-component 96.4 0.21 7.1E-06 37.8 16.2 117 14-143 406-529 (795)
289 4a2l_A BT_4663, two-component 96.4 0.21 7.2E-06 37.8 17.7 139 14-161 357-507 (795)
290 1cru_A Protein (soluble quinop 96.4 0.15 5.1E-06 36.1 16.0 109 15-128 28-162 (454)
291 3kya_A Putative phosphatase; s 96.3 0.17 5.8E-06 36.3 13.6 114 15-138 187-339 (496)
292 1k3i_A Galactose oxidase precu 96.3 0.034 1.1E-06 41.2 8.9 73 18-102 247-326 (656)
293 3m0c_C LDL receptor, low-densi 96.2 0.27 9.1E-06 37.5 16.4 119 15-147 515-639 (791)
294 3p5b_L Low density lipoprotein 96.2 0.17 6E-06 35.1 17.1 128 16-157 204-337 (400)
295 1w6s_A Methanol dehydrogenase 96.2 0.075 2.6E-06 39.1 10.2 74 74-148 111-199 (599)
296 1tl2_A L10, protein (tachylect 96.2 0.017 5.7E-07 36.9 5.8 65 70-138 42-114 (236)
297 2ad6_A Methanol dehydrogenase 96.1 0.021 7.3E-07 41.6 6.8 48 79-126 474-523 (571)
298 3amr_A 3-phytase; beta-propell 96.0 0.2 6.9E-06 34.3 15.2 121 17-147 131-271 (355)
299 3a9g_A Putative uncharacterize 95.9 0.23 7.8E-06 33.9 14.5 103 15-128 30-153 (354)
300 3s94_A LRP-6, low-density lipo 95.8 0.38 1.3E-05 35.6 16.9 134 16-161 42-180 (619)
301 3s94_A LRP-6, low-density lipo 95.7 0.41 1.4E-05 35.4 12.8 76 70-147 172-250 (619)
302 2ism_A Putative oxidoreductase 95.7 0.28 9.7E-06 33.4 11.1 68 70-140 32-114 (352)
303 3v9f_A Two-component system se 95.7 0.47 1.6E-05 35.8 15.4 133 14-161 363-504 (781)
304 1flg_A Protein (quinoprotein e 95.6 0.034 1.2E-06 40.6 6.3 48 80-127 497-547 (582)
305 4a0p_A LRP6, LRP-6, low-densit 95.5 0.52 1.8E-05 34.9 14.6 92 70-161 38-132 (628)
306 3sbq_A Nitrous-oxide reductase 95.4 0.28 9.7E-06 35.9 10.2 102 17-128 326-453 (638)
307 3ei3_A DNA damage-binding prot 95.4 0.56 1.9E-05 37.4 12.7 68 71-142 834-915 (1158)
308 2vpj_A Kelch-like protein 12; 95.4 0.27 9.1E-06 32.3 9.7 107 24-142 159-280 (301)
309 3v9f_A Two-component system se 95.3 0.67 2.3E-05 35.0 16.3 131 14-160 407-547 (781)
310 2xbg_A YCF48-like protein; pho 95.1 0.43 1.5E-05 32.0 16.5 134 11-160 160-301 (327)
311 2xn4_A Kelch-like protein 2; s 95.1 0.3 1E-05 32.1 9.3 64 79-143 204-279 (302)
312 2be1_A Serine/threonine-protei 95.1 0.095 3.2E-06 35.7 6.8 111 26-148 11-138 (339)
313 3ii7_A Kelch-like protein 7; p 95.0 0.31 1.1E-05 32.1 9.1 105 26-142 13-129 (306)
314 3das_A Putative oxidoreductase 95.0 0.52 1.8E-05 32.2 15.0 107 15-128 33-158 (347)
315 4gq2_M Nucleoporin NUP120; bet 94.7 0.78 2.7E-05 35.8 11.6 35 113-147 238-273 (950)
316 3amr_A 3-phytase; beta-propell 94.6 0.69 2.4E-05 31.7 14.5 89 70-159 129-236 (355)
317 2xbg_A YCF48-like protein; pho 94.5 0.66 2.3E-05 31.1 18.0 131 14-161 122-259 (327)
318 2vpj_A Kelch-like protein 12; 94.3 0.69 2.4E-05 30.3 11.0 107 24-142 112-233 (301)
319 4fhn_B Nucleoporin NUP120; pro 94.1 0.54 1.9E-05 37.4 9.8 32 117-148 245-276 (1139)
320 2uvk_A YJHT; unknown function, 93.8 0.97 3.3E-05 30.5 11.2 95 24-130 19-128 (357)
321 2xn4_A Kelch-like protein 2; s 93.8 0.87 3E-05 29.9 10.2 107 24-142 108-231 (302)
322 4a0p_A LRP6, LRP-6, low-densit 93.5 1.7 5.8E-05 32.2 17.7 117 16-148 125-245 (628)
323 1zgk_A Kelch-like ECH-associat 93.5 1 3.5E-05 29.7 10.7 108 24-143 168-290 (308)
324 2zwa_A Leucine carboxyl methyl 93.2 0.88 3E-05 34.1 9.2 109 24-142 451-579 (695)
325 4gq2_M Nucleoporin NUP120; bet 93.1 2.3 7.7E-05 33.3 11.5 37 70-106 237-273 (950)
326 2zwa_A Leucine carboxyl methyl 93.1 1.4 4.8E-05 33.1 10.1 112 23-143 499-638 (695)
327 3ii7_A Kelch-like protein 7; p 92.7 1.4 4.6E-05 29.0 10.2 108 23-142 54-180 (306)
328 2uvk_A YJHT; unknown function, 92.7 0.41 1.4E-05 32.3 6.4 55 91-146 286-348 (357)
329 3sre_A PON1, serum paraoxonase 92.7 1.6 5.6E-05 29.9 14.0 98 16-128 167-285 (355)
330 1zgk_A Kelch-like ECH-associat 92.7 1.4 4.9E-05 29.0 10.3 63 79-142 168-242 (308)
331 3a9g_A Putative uncharacterize 92.6 1.6 5.6E-05 29.7 13.7 44 119-162 275-322 (354)
332 2wg3_C Hedgehog-interacting pr 91.8 2.5 8.6E-05 30.1 12.5 113 15-129 15-158 (463)
333 3s25_A Hypothetical 7-bladed b 91.3 2.2 7.6E-05 28.4 12.4 65 74-143 109-179 (302)
334 2g8s_A Glucose/sorbosone dehyd 91.0 2.6 8.8E-05 28.7 9.3 68 70-139 19-106 (353)
335 3das_A Putative oxidoreductase 91.0 2.7 9.2E-05 28.7 8.8 53 110-162 31-90 (347)
336 1cru_A Protein (soluble quinop 90.4 3.6 0.00012 29.2 11.2 58 70-127 28-97 (454)
337 2woz_A Kelch repeat and BTB do 89.6 3.1 0.00011 27.5 10.6 63 79-142 109-186 (318)
338 3zwu_A Alkaline phosphatase PH 89.6 2.7 9.3E-05 31.0 8.3 58 70-127 477-548 (592)
339 4asc_A Kelch repeat and BTB do 89.3 3.3 0.00011 27.3 11.6 65 79-144 196-281 (315)
340 4asc_A Kelch repeat and BTB do 89.2 3.4 0.00012 27.3 11.1 108 23-142 44-176 (315)
341 2xzh_A Clathrin heavy chain 1; 89.2 4 0.00014 28.0 13.7 71 70-140 261-332 (365)
342 4fhn_B Nucleoporin NUP120; pro 88.9 4.2 0.00014 32.5 9.5 37 70-106 239-275 (1139)
343 2be1_A Serine/threonine-protei 88.9 3.9 0.00013 27.8 8.2 65 81-145 11-81 (339)
344 3f7f_A Nucleoporin NUP120; nuc 88.8 1.1 3.9E-05 33.7 5.9 36 113-149 224-259 (729)
345 2woz_A Kelch repeat and BTB do 87.7 4.4 0.00015 26.8 9.6 66 79-145 206-292 (318)
346 3s25_A Hypothetical 7-bladed b 86.9 5.1 0.00018 26.7 10.1 102 19-140 109-216 (302)
347 3ei3_A DNA damage-binding prot 86.1 12 0.00041 30.2 13.3 69 70-138 555-634 (1158)
348 4a9v_A PHOX; hydrolase, beta-p 84.8 9.9 0.00034 28.1 8.7 59 70-128 477-549 (592)
349 3zwu_A Alkaline phosphatase PH 84.1 4.9 0.00017 29.7 7.0 60 17-86 479-548 (592)
350 3sbq_A Nitrous-oxide reductase 83.5 3.5 0.00012 30.5 5.9 70 70-140 324-408 (638)
351 1bpo_A Protein (clathrin); cla 80.8 13 0.00046 26.7 15.3 71 70-140 260-331 (494)
352 3f7f_A Nucleoporin NUP120; nuc 79.6 4.8 0.00017 30.5 5.7 36 70-107 223-258 (729)
353 2xzh_A Clathrin heavy chain 1; 74.8 18 0.00061 24.9 14.8 116 19-152 72-200 (365)
354 4a9v_A PHOX; hydrolase, beta-p 74.1 17 0.00058 26.9 7.1 60 17-86 479-548 (592)
355 1bpo_A Protein (clathrin); cla 74.0 22 0.00076 25.6 14.1 116 19-152 71-199 (494)
356 2wg3_C Hedgehog-interacting pr 68.2 18 0.00061 25.8 6.2 52 111-162 14-79 (463)
357 1xi4_A Clathrin heavy chain; a 64.6 39 0.0013 28.5 7.8 106 19-141 71-189 (1630)
358 1xi4_A Clathrin heavy chain; a 59.0 44 0.0015 28.2 7.2 69 70-139 260-330 (1630)
359 1q47_A Semaphorin 3A; beta pro 52.6 63 0.0022 23.4 6.7 25 70-94 463-487 (495)
360 3al9_A Plexin-A2; beta-propell 50.0 73 0.0025 23.3 7.7 73 15-94 401-476 (539)
361 3kvp_A Uncharacterized protein 49.2 25 0.00084 17.7 4.3 30 24-54 28-57 (72)
362 1q47_A Semaphorin 3A; beta pro 44.7 87 0.003 22.7 7.3 55 81-135 422-487 (495)
363 1olz_A Semaphorin 4D; developm 42.8 1.1E+02 0.0037 23.2 7.5 25 70-94 451-477 (663)
364 3al9_A Plexin-A2; beta-propell 40.9 69 0.0024 23.5 5.5 65 71-135 402-476 (539)
365 4gz8_A Semaphorin-3A; multi-do 37.9 1.3E+02 0.0045 22.8 7.3 26 70-95 471-496 (667)
366 1ukf_A Avirulence protein AVRP 35.6 69 0.0024 19.8 4.1 32 70-101 120-152 (188)
367 4gz8_A Semaphorin-3A; multi-do 34.8 1.5E+02 0.0051 22.5 7.3 54 82-135 431-495 (667)
368 3nvq_A Semaphorin-7A; beta-pro 34.7 1.4E+02 0.0049 22.3 6.5 26 70-95 420-445 (590)
369 3oky_A Plexin-A2; transmembran 28.7 1.6E+02 0.0056 22.4 5.9 71 17-95 402-476 (681)
370 3mwp_A Nucleoprotein; structur 28.6 18 0.00062 25.7 0.8 19 85-103 162-180 (577)
371 1sr4_A CDT A, cytolethal diste 28.5 1.1E+02 0.0039 19.2 5.0 59 85-146 64-123 (206)
372 3nvq_A Semaphorin-7A; beta-pro 27.1 2E+02 0.0068 21.5 6.9 55 82-136 382-445 (590)
373 3uc1_A DNA gyrase subunit A; D 22.4 1.8E+02 0.0063 19.6 12.6 104 24-138 108-226 (327)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=1.2e-29 Score=170.01 Aligned_cols=148 Identities=18% Similarity=0.199 Sum_probs=127.7
Q ss_pred CcccceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC
Q psy1859 1 MGYIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
|....++....+...|.+++|+|+++++++++.||.|++|+++. ......+..|.. +|.+++|+|++
T Consensus 1 ~~l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~----~~~~~~~~~~~~---------~v~~~~~~~~~ 67 (304)
T 2ynn_A 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYET----QVEVRSIQVTET---------PVRAGKFIARK 67 (304)
T ss_dssp -CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT----TEEEEEEECCSS---------CEEEEEEEGGG
T ss_pred CcceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC----CceeEEeeccCC---------cEEEEEEeCCC
Confidence 34445555666778899999999999999999999999976653 334444454443 79999999999
Q ss_pred CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEEE
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSLC 158 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~ 158 (162)
++|++++.|+.|++||+.+++.+..+..|...+.++ |+|+++++++++.|++|++||++++ .....+.+|...|.+++
T Consensus 68 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147 (304)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEE
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEE
Confidence 999999999999999999999999999999999999 9999999999999999999999877 55677889999999999
Q ss_pred ecC
Q psy1859 159 FSY 161 (162)
Q Consensus 159 ~~p 161 (162)
|+|
T Consensus 148 ~~p 150 (304)
T 2ynn_A 148 FNP 150 (304)
T ss_dssp ECT
T ss_pred ECC
Confidence 998
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=5.5e-29 Score=168.05 Aligned_cols=137 Identities=16% Similarity=0.286 Sum_probs=123.1
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
...+.+++|+|++++|++++.||.|++|+.. + .+....+.+|.. +|.+++|+|++++|++++.|+.|
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~--~--~~~~~~~~~h~~---------~v~~l~~spd~~~l~s~s~dg~i 230 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIA--T--GKLLHTLEGHAM---------PIRSLTFSPDSQLLVTASDDGYI 230 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETT--T--TEEEEEECCCSS---------CCCEEEECTTSCEEEEECTTSCE
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECC--C--CcEEEEEcccCC---------ceeEEEEcCCCCEEEEEcCCCeE
Confidence 4567899999999999999999999996554 3 344555555543 79999999999999999999999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++||++.++....+..|...+.++ |+|++++|++++.|+.|++||+++++++.++..|...|.+++|+||
T Consensus 231 ~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 301 (321)
T 3ow8_A 231 KIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN 301 (321)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 999999998888999999999999 9999999999999999999999999999999999999999999986
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=2.9e-28 Score=169.37 Aligned_cols=140 Identities=17% Similarity=0.199 Sum_probs=125.7
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|+++++++|+.||.|+||+++.. .....+.+|.. .|.+++|+|++++|++|+.|
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~----~~~~~l~~h~~---------~V~~v~~~~~~~~l~sgs~D 171 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG----DFERTLKGHTD---------SVQDISFDHSGKLLASCSAD 171 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC----CCCEEECCCSS---------CEEEEEECTTSSEEEEEETT
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----cEEEEEeccCC---------cEEEEEEcCCCCEEEEEeCC
Confidence 446678999999999999999999999999776543 33445555544 79999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|++||+.+++.+..+..|...|.++ |+|+++++++++.|+.|++||++++.++..+.+|...|.++.|+||
T Consensus 172 ~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 245 (410)
T 1vyh_C 172 MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245 (410)
T ss_dssp SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCC
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999986
No 4
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=2e-27 Score=159.44 Aligned_cols=140 Identities=19% Similarity=0.241 Sum_probs=123.9
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|++++|++++.||.+++|+... .+....+.+|. ..|.+++|+|++++|++++.|
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~----~~~~~~~~~h~---------~~v~~~~~~~~~~~l~s~~~d 86 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTISGHK---------LGISDVAWSSDSNLLVSASDD 86 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----CCEEEEECCCS---------SCEEEEEECTTSSEEEEEETT
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC----cccchhhccCC---------CceEEEEEcCCCCEEEEECCC
Confidence 34566789999999999999999999999976543 23333444444 379999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|++||+++++.+..+..|...+.++ |+|+++++++++.|+.|++||+++++.+..+..|..+|.+++|+|+
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCC
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999986
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=1.1e-27 Score=163.04 Aligned_cols=139 Identities=19% Similarity=0.175 Sum_probs=116.7
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSD 89 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d 89 (162)
.+...|.+++|+|++++|++|+.|+.|++|++. + .+.+..+.+|.. .|.+++|+|++ .+|++++.|
T Consensus 125 ~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~--~--~~~~~~~~~h~~---------~V~~~~~~~~~~~~l~s~s~D 191 (344)
T 4gqb_B 125 EHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA--Q--QVVLSSYRAHAA---------QVTCVAASPHKDSVFLSCSED 191 (344)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--T--TEEEEEECCCSS---------CEEEEEECSSCTTEEEEEETT
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC--C--CcEEEEEcCcCC---------ceEEEEecCCCCCceeeeccc
Confidence 456779999999999999999999999996654 3 445556666554 79999999998 688999999
Q ss_pred CeEEEEeCCCccceeeee--ecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFH--RYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~--~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|++||+++++....+. .+...+.++ |+| +++++++|+.|+.|++||+++++++..+.+|...|++++|+||
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~ 268 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPH 268 (344)
T ss_dssp SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSS
T ss_pred cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccC
Confidence 999999999998877664 345568888 998 5678899999999999999999999999999999999999986
No 6
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.5e-27 Score=162.46 Aligned_cols=138 Identities=12% Similarity=0.108 Sum_probs=116.5
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeee-eeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYA-FKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
..+.+++|+|++++|++|+.|+.|+||+.+... ...... ..+ |...|.+++|+|++++|++++.|+.+
T Consensus 17 ~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~--~~~~~~~~~~---------h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 17 SRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDS--WICKSVLSEG---------HQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEEEEETTE--EEEEEEECSS---------CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCc--ceeeeeeccc---------cCCcEEEEEECCCCCEEEEEECCCcE
Confidence 378899999999999999999999998776532 111111 122 44589999999999999999999999
Q ss_pred EEEeCCCc--cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc---eeeeeeccCCCceeEEEecCC
Q psy1859 93 NIWDGFNK--KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK---KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~--~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~v~~~pd 162 (162)
++||+..+ +.+..+.+|...|.++ |+|++++|++++.|+.|++||++++ .++..+..|...|.+++|+|+
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 99998875 4567788899999999 9999999999999999999999865 346677889999999999986
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.4e-27 Score=162.56 Aligned_cols=142 Identities=13% Similarity=0.168 Sum_probs=121.1
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|++++|++++.|+.++||+.+... ......+.+|.. .|.+++|+|++++|++++.|
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~--~~~~~~~~~h~~---------~v~~v~~sp~~~~l~s~s~D 126 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD--FECVTTLEGHEN---------EVKSVAWAPSGNLLATCSRD 126 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC---EEEEEEECCCSS---------CEEEEEECTTSSEEEEEETT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC--eEEEEEccCCCC---------CceEEEEeCCCCEEEEEECC
Confidence 3466779999999999999999999999998776543 344555555544 79999999999999999999
Q ss_pred CeEEEEeCCCcc---ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce--eeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKK---RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK--RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~---~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|++||++.+. .+..+..|...+.++ |+|++++|++++.|+.|++||+++++ +...+.+|...|++++|+||
T Consensus 127 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 205 (345)
T 3fm0_A 127 KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS 205 (345)
T ss_dssp SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTT
T ss_pred CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCC
Confidence 999999998753 355667888999999 99999999999999999999998775 45678899999999999996
No 8
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-27 Score=161.39 Aligned_cols=142 Identities=14% Similarity=0.220 Sum_probs=115.7
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcc---cceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPE---MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
+...+.+++|+|++++|++++.|+.|+||+.+.... .......+.+| ...|.+++|+|++++|++++.
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h---------~~~V~~v~~sp~g~~las~s~ 127 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH---------ENEVKGVAWSNDGYYLATCSR 127 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-------------CEEEEEECTTSCEEEEEET
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC---------CCcEEEEEECCCCCEEEEEeC
Confidence 567799999999999999999999999987643210 11233334444 448999999999999999999
Q ss_pred CCeEEEEeCCCc----cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc--eeeeeeccCCCceeEEEecC
Q psy1859 89 DGYVNIWDGFNK----KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK--KRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 89 d~~v~~wd~~~~----~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~v~~~p 161 (162)
|+.|++||++.. +.+..+..|...+.++ |+|++.+|++++.|++|++||.+++ +++..+.+|...|.+++|+|
T Consensus 128 D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~ 207 (330)
T 2hes_X 128 DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK 207 (330)
T ss_dssp TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC
Confidence 999999999532 4566778899999999 9999999999999999999998776 57888899999999999998
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
+
T Consensus 208 ~ 208 (330)
T 2hes_X 208 T 208 (330)
T ss_dssp S
T ss_pred C
Confidence 5
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=1.3e-27 Score=161.33 Aligned_cols=137 Identities=20% Similarity=0.314 Sum_probs=121.2
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
...+.+++|+|++++|++++.+|.+++|+.+.. +....+..+.. .+.+++|+|++++|++++.|+.|
T Consensus 122 ~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~----~~~~~~~~~~~---------~v~~~~~spdg~~lasg~~dg~i 188 (321)
T 3ow8_A 122 PVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG----KKEYSLDTRGK---------FILSIAYSPDGKYLASGAIDGII 188 (321)
T ss_dssp TTCCCCEEECTTSSEEEEECTTSEEEEEETTTC----SEEEEEECSSS---------CEEEEEECTTSSEEEEEETTSCE
T ss_pred CccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC----ceeEEecCCCc---------eEEEEEECCCCCEEEEEcCCCeE
Confidence 345677999999999999999999999766543 33334444332 69999999999999999999999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++||+++++.+..+..|...+.++ |+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|+||
T Consensus 189 ~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 189 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp EEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCC
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999986
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=4.7e-27 Score=159.99 Aligned_cols=141 Identities=15% Similarity=0.158 Sum_probs=113.6
Q ss_pred ccccccEEEEEEeeCCC-eEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEec
Q psy1859 10 SSLKFQTRCIKCFPNKQ-GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGG 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~-~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~ 87 (162)
..+...+.+++|+|++. .|++++.|+.|++|+....+ ....+..+. +...+.+++|+|++ ++|++|+
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~~~-------~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK----PASQIGCSA-------PGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS----CEEECC-----------CCCEEEEEECSSCTTEEEEEE
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccc----eeeeeecce-------eeccceeeeecCCCCcceEEec
Confidence 34567889999999875 67899999999997655432 222222211 22268999999965 7899999
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCC-CEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|+.|++||+++++++..+..|...|+++ |+|++ ++|++++.|++|++||+++++++ .+.+|.+.|++++|+||
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~ 310 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPL 310 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSS
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCC
Confidence 99999999999999999999999999999 99998 57999999999999999988765 46789999999999986
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=6.4e-27 Score=158.97 Aligned_cols=139 Identities=22% Similarity=0.319 Sum_probs=119.3
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+.+.+.+++|+|+++++++|+.|+.|++|+... ......+.+|.. .|.+++|+|++++|++++.|+
T Consensus 182 ~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~----~~~~~~~~~h~~---------~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE----GMCRQTFTGHES---------DINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----CSEEEEECCCSS---------CEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC----CeeEEEEcCCcC---------CEEEEEEcCCCCEEEEEcCCC
Confidence 4567789999999999999999999999966543 334444555543 799999999999999999999
Q ss_pred eEEEEeCCCccceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++||++.++.+..+.. +...+.++ |+|+++++++|+.|+.|++||+.+++.+..+.+|...|.+++|+||
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~d 323 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323 (340)
T ss_dssp CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCC
Confidence 999999998877666542 23468899 9999999999999999999999999999999999999999999986
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=5.4e-27 Score=163.01 Aligned_cols=140 Identities=10% Similarity=0.080 Sum_probs=124.9
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|++++|++|+.|+.|++|+++. ......+.+|. ..|.+++|+|++.+|++++.|
T Consensus 147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~----~~~~~~~~~h~---------~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHD---------HNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS----SCEEECCCCCS---------SCEEEEEECSSSSEEEEEETT
T ss_pred eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC----CceeEEEcCCC---------CCEEEEEEeCCCCEEEEEeCC
Confidence 34567789999999999999999999999976643 33444555554 379999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|++||++++.++..+..|...+..+ ++|++.++++++.|+.|++||++++++...+..|...|.+++|+|+
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~ 287 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPE 287 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCS
T ss_pred CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCc
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999984
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.6e-26 Score=155.79 Aligned_cols=144 Identities=10% Similarity=0.095 Sum_probs=122.0
Q ss_pred eccccccEEEEEEeeCC-CeEEEEcCCCcEEEEEecCCcc-cceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 9 ESSLKFQTRCIKCFPNK-QGYVLSSIEGRAAVEYLDTGPE-MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~-~~l~~~~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
...+.+.|.+++|+|++ ++|++|+.|++|++|++..... .......+.+|. ..|.+++|+|++++|+++
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~---------~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS---------HIVQDCTLTADGAYALSA 83 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS---------SCEEEEEECTTSSEEEEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCc---------ccEEEEEECCCCCEEEEE
Confidence 34566778999999965 8999999999999988764221 112334445544 489999999999999999
Q ss_pred cCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|+.|++||+.+++.+..+.+|...|.++ |+|++.++++++.|+.|++||++ ++++..+.+|...|.+++|+|+
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC
T ss_pred eCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccC
Confidence 999999999999999999999999999999 99999999999999999999996 5667788899999999999873
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=1.7e-26 Score=157.76 Aligned_cols=150 Identities=21% Similarity=0.251 Sum_probs=123.5
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeee-----------------------------
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR----------------------------- 59 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~----------------------------- 59 (162)
...+...|.+++|+|++++|++|+.||.|+||+..... ... .+..+.
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~--~~~--~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN--KEH--AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEE--EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--cce--EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 34566778999999999999999999999997654322 111 111000
Q ss_pred ----------eccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcC--CCCEEEE
Q psy1859 60 ----------IKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ--EYNTFAT 126 (162)
Q Consensus 60 ----------~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~--~~~~l~~ 126 (162)
.......|...|.+++|+|++..|++++.|+.|++||+++++.+..+..|...+.++ |+| ++.++++
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~s 215 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVS 215 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEE
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEE
Confidence 000112367789999999999999999999999999999999999999999999999 877 5789999
Q ss_pred ecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 127 GGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 127 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++.|+.|++||+++++++..+..|...|++++|+|+
T Consensus 216 gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~ 251 (354)
T 2pbi_B 216 GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPS 251 (354)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCC
Confidence 999999999999999999999999999999999986
No 15
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=1.6e-26 Score=154.38 Aligned_cols=143 Identities=13% Similarity=0.113 Sum_probs=118.5
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEEe
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFATG 86 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~ 86 (162)
...+...|.+++|+|++++|++|+.|++|+||+.+... .+....+.+|.. +|.+++|+|. +++|+++
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~--~~~~~~l~gH~~---------~V~~v~~s~~~~g~~l~s~ 73 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET--HKLIDTLTGHEG---------PVWRVDWAHPKFGTILASC 73 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC--BCCCEEECCCSS---------CEEEEEECCGGGCSEEEEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC--cEEEEEEccccC---------CeEEEEecCCCcCCEEEEE
Confidence 34567789999999999999999999999997775433 344455555544 7999999864 7999999
Q ss_pred cCCCeEEEEeCCCcc--ceeeeeecccceeEE-EcCC--CCEEEEecCCCeEEEEeCCCce--eeeeeccCCCceeEEEe
Q psy1859 87 GSDGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQE--YNTFATGGSDGYVNIWDGFNKK--RLCQFHRYDTGITSLCF 159 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~v~~ 159 (162)
+.|+.|++||+++++ .+..+..|...+.++ |+|+ +.+|++++.|+.|++||++++. ....+.+|...|.+++|
T Consensus 74 s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~ 153 (297)
T 2pm7_B 74 SYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (297)
T ss_dssp ETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEE
T ss_pred cCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEee
Confidence 999999999998864 455667788999999 9997 8999999999999999998763 24556789999999999
Q ss_pred cCC
Q psy1859 160 SYD 162 (162)
Q Consensus 160 ~pd 162 (162)
+|+
T Consensus 154 ~p~ 156 (297)
T 2pm7_B 154 APA 156 (297)
T ss_dssp CCC
T ss_pred cCC
Confidence 984
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=2.9e-26 Score=156.76 Aligned_cols=146 Identities=16% Similarity=0.120 Sum_probs=118.5
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc----------------------------
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE---------------------------- 62 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 62 (162)
.+...+.+++|+|++++|++++.|+.|++|+..... ....+.+|...-
T Consensus 137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~----~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~ 212 (357)
T 4g56_B 137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA----VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR 212 (357)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc----EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECC
Confidence 456779999999999999999999999997764322 111111111000
Q ss_pred --------CcccceeceEEEEecCCC-CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCC-CEEEEecCCC
Q psy1859 63 --------DGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEY-NTFATGGSDG 131 (162)
Q Consensus 63 --------~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~-~~l~~~~~d~ 131 (162)
....|...+.+++|+|++ .+|++++.|+.|++||+++++.+..+..|...++++ |+|++ ++|++++.|+
T Consensus 213 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~ 292 (357)
T 4g56_B 213 KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDC 292 (357)
T ss_dssp SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred CCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC
Confidence 123355679999999985 789999999999999999999999999999999999 99987 5799999999
Q ss_pred eEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 132 YVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 132 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+|+|||+++++.+..+ +|.+.|++++|+|
T Consensus 293 ~i~iwd~~~~~~~~~~-~H~~~V~~vafsP 321 (357)
T 4g56_B 293 TVAVLDADFSEVFRDL-SHRDFVTGVAWSP 321 (357)
T ss_dssp CEEEECTTSCEEEEEC-CCSSCEEEEEECS
T ss_pred EEEEEECCCCcEeEEC-CCCCCEEEEEEeC
Confidence 9999999999887655 7999999999998
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=2.4e-26 Score=156.15 Aligned_cols=141 Identities=15% Similarity=0.223 Sum_probs=121.9
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
....+.+++|+|+++++++++.|+.+++|++............+.+| ...|.++.|++++. +++++.|+.
T Consensus 96 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h---------~~~v~~~~~~~~~~-l~s~s~d~~ 165 (340)
T 1got_B 96 RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGH---------TGYLSCCRFLDDNQ-IVTSSGDTT 165 (340)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECC---------SSCEEEEEEEETTE-EEEEETTSC
T ss_pred CCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCC---------CccEEEEEECCCCc-EEEEECCCc
Confidence 45568899999999999999999999998776543222333334444 34799999998764 889999999
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|++||+++++.+..+..|...+.++ |+|+++++++++.|+.|++||+++++++..+.+|...|++++|+||
T Consensus 166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~ 237 (340)
T 1got_B 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN 237 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCC
Confidence 9999999999999999999999999 9999999999999999999999999999999999999999999986
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=2.7e-26 Score=166.47 Aligned_cols=152 Identities=17% Similarity=0.239 Sum_probs=124.2
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeee-----------------------------
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHR----------------------------- 59 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~----------------------------- 59 (162)
...+...+.+++|+|+|++|++|+.|++|+||+..... ......+.+|.
T Consensus 55 ~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~--~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~ 132 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT--HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVF 132 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT--CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEE
T ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCc--ceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEE
Confidence 34566778999999999999999999999998764322 11111111110
Q ss_pred ------eccCcccceeceEEEEecCCCC-EEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCC
Q psy1859 60 ------IKEDGIEKIYPVNAISFHQEYN-TFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG 131 (162)
Q Consensus 60 ------~~~~~~~~~~~v~~~~~~p~~~-~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~ 131 (162)
......+|...|.+++|+|++. .|++++.|+.|++||...++....+.+|...|.++ |+|+|++|++++.|+
T Consensus 133 ~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~ 212 (611)
T 1nr0_A 133 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDG 212 (611)
T ss_dssp ETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCC
Confidence 0001246888999999999985 69999999999999999888888999999999999 999999999999999
Q ss_pred eEEEEeCCCceeeeeec-------cCCCceeEEEecCC
Q psy1859 132 YVNIWDGFNKKRLCQFH-------RYDTGITSLCFSYD 162 (162)
Q Consensus 132 ~i~iwd~~~~~~~~~~~-------~~~~~v~~v~~~pd 162 (162)
+|++||+.+++.+..+. +|.+.|.+++|+||
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd 250 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 250 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC
Confidence 99999999998887774 79999999999996
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.6e-26 Score=156.47 Aligned_cols=144 Identities=12% Similarity=0.187 Sum_probs=114.8
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|++++|++|+.|+.|++|+.+......+....+.+|. ..|.+++|+|++.+|++++.|
T Consensus 104 ~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~---------~~v~~v~~~p~~~~l~s~s~D 174 (330)
T 2hes_X 104 EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHS---------QDVKHVIWHPSEALLASSSYD 174 (330)
T ss_dssp C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS---------SCEEEEEECSSSSEEEEEETT
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC---------CceEEEEECCCCCEEEEEcCC
Confidence 34566789999999999999999999999987743221123334444444 479999999999999999999
Q ss_pred CeEEEEeCCCc--cceeeeeecccceeEE-EcCC--CCEEEEecCCCeEEEEeCCCc--------eeeeeecc-CCCcee
Q psy1859 90 GYVNIWDGFNK--KRLCQFHRYDTGITSL-FHQE--YNTFATGGSDGYVNIWDGFNK--------KRLCQFHR-YDTGIT 155 (162)
Q Consensus 90 ~~v~~wd~~~~--~~~~~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~-~~~~v~ 155 (162)
+.|++||...+ +++..+.+|...|.++ |+|+ +.++++++.|++|++||++++ .+...+.. |...|+
T Consensus 175 ~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (330)
T 2hes_X 175 DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVY 254 (330)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEE
T ss_pred CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceE
Confidence 99999998765 5677888999999999 9998 778999999999999998754 34445554 889999
Q ss_pred EEEecCC
Q psy1859 156 SLCFSYD 162 (162)
Q Consensus 156 ~v~~~pd 162 (162)
+++|+|+
T Consensus 255 ~v~~s~~ 261 (330)
T 2hes_X 255 NVAWGFN 261 (330)
T ss_dssp EEEECTT
T ss_pred EEEEcCC
Confidence 9999864
No 20
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=4.4e-27 Score=158.39 Aligned_cols=149 Identities=15% Similarity=0.121 Sum_probs=115.2
Q ss_pred ccceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC--CC
Q psy1859 3 YIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ--EY 80 (162)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~ 80 (162)
.........+.+.|.+++|+|++++|++|+.|++|+||+..... ......+.+|.. .|.+++|+| ++
T Consensus 3 ~~~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~--~~~~~~l~gH~~---------~V~~v~~~~~~~~ 71 (316)
T 3bg1_A 3 SVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG--QILIADLRGHEG---------PVWQVAWAHPMYG 71 (316)
T ss_dssp -----------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE--EEEEEEEECCSS---------CEEEEEECCGGGS
T ss_pred ceeeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC--cEEEEEEcCCCc---------cEEEEEeCCCCCC
Confidence 34455566678889999999999999999999999998776432 334445555544 799999986 37
Q ss_pred CEEEEecCCCeEEEEeCCCcc--ceeeeeecccceeEE-EcCC--CCEEEEecCCCeEEEEeCCCce---eeeeeccCCC
Q psy1859 81 NTFATGGSDGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQE--YNTFATGGSDGYVNIWDGFNKK---RLCQFHRYDT 152 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~ 152 (162)
++|++++.|+.|++||+++++ ....+..|...|.++ |+|+ +.+|++++.|+.|++||++.+. ....+..|..
T Consensus 72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 899999999999999999864 456677899999999 9997 8899999999999999998753 2445678999
Q ss_pred ceeEEEecCC
Q psy1859 153 GITSLCFSYD 162 (162)
Q Consensus 153 ~v~~v~~~pd 162 (162)
.|.+++|+|+
T Consensus 152 ~v~~~~~~~~ 161 (316)
T 3bg1_A 152 GCNAVSWAPA 161 (316)
T ss_dssp CBCCCEECCC
T ss_pred CcceEEEccc
Confidence 9999999985
No 21
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.95 E-value=9.2e-26 Score=151.16 Aligned_cols=142 Identities=14% Similarity=0.197 Sum_probs=120.3
Q ss_pred eccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC--CCCEEEE
Q psy1859 9 ESSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ--EYNTFAT 85 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~l~~ 85 (162)
...+...+.+++|+| ++..|++|+.|+.|++|+..... ....+..+ |...+..++|+| ++.+|++
T Consensus 136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~----~~~~~~~~--------~~~~v~~~~~~~~~~~~~l~s 203 (304)
T 2ynn_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST----PNFTLTTG--------QERGVNYVDYYPLPDKPYMIT 203 (304)
T ss_dssp ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS----CSEEEECC--------CTTCEEEEEECCSTTCCEEEE
T ss_pred hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC----ccceeccC--------CcCcEEEEEEEEcCCCCEEEE
Confidence 344567789999999 57899999999999997764322 22222221 223688899987 6689999
Q ss_pred ecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++.|+.|++||+++++++..+.+|...+..+ |+|++++|++++.|+.|++||+++++.+..+..|...+.+++|+|+
T Consensus 204 ~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (304)
T 2ynn_A 204 ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPT 281 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTT
T ss_pred EcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCC
Confidence 9999999999999999999999999999999 9999999999999999999999999999999999999999999885
No 22
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=8.9e-26 Score=153.48 Aligned_cols=145 Identities=11% Similarity=0.095 Sum_probs=118.0
Q ss_pred eccccccEEEEEE-----ee-CCCeEEEEcCCCcEEEEEecCCccc---ceeeeeeeeeeeccCcccceeceEEEEecCC
Q psy1859 9 ESSLKFQTRCIKC-----FP-NKQGYVLSSIEGRAAVEYLDTGPEM---QKMKYAFKCHRIKEDGIEKIYPVNAISFHQE 79 (162)
Q Consensus 9 ~~~~~~~~~~i~~-----~~-~~~~l~~~~~~g~i~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 79 (162)
...+...|.+++| ++ ++++|++|+.|++|++|+....... ......+.+ |...|.+++|+|+
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~---------h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG---------HNHFVSDLALSQE 87 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC---------CSSCEEEEEECSS
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhcc---------CCCceEEEEECCC
Confidence 3456677899999 66 8999999999999999887643210 122223334 4458999999999
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee--ccCCCceeE
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF--HRYDTGITS 156 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~ 156 (162)
+.++++++.|+.|++||+++++.+..+..|...|.++ |+|+++++++++.|+.|++||+......... ..|...|.+
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSC 167 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeee
Confidence 9999999999999999999999999999999999999 9999999999999999999999744332221 368889999
Q ss_pred EEecCC
Q psy1859 157 LCFSYD 162 (162)
Q Consensus 157 v~~~pd 162 (162)
++|+|+
T Consensus 168 ~~~~~~ 173 (343)
T 2xzm_R 168 VRYSPI 173 (343)
T ss_dssp EEECCC
T ss_pred eeeccc
Confidence 999985
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=7.2e-26 Score=162.70 Aligned_cols=137 Identities=18% Similarity=0.286 Sum_probs=119.9
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|+++++++++.|+.+++|+.+ .+....+.+|. ..|.+++|+|++++|++++.|
T Consensus 423 ~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-----~~~~~~~~~~~---------~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 423 TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-----GQLLQTLTGHS---------SSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----SCEEEEEECCS---------SCEEEEEECTTSCEEEEEETT
T ss_pred cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-----CCEEEEEcCCC---------CCEEEEEEcCCCCEEEEEeCC
Confidence 3456778999999999999999999999997643 23344444444 379999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|++||. +++.+..+..|...|+++ |+|++++|++++.|+.|++||. +++++..+.+|.+.|++++|+||
T Consensus 489 ~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~d 560 (577)
T 2ymu_A 489 KTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPD 560 (577)
T ss_dssp SEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTT
T ss_pred CEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCC
Confidence 99999995 578888999999999999 9999999999999999999996 67888999999999999999997
No 24
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=4.5e-26 Score=153.76 Aligned_cols=149 Identities=17% Similarity=0.197 Sum_probs=122.2
Q ss_pred ceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC--CCCE
Q psy1859 5 MQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ--EYNT 82 (162)
Q Consensus 5 ~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~ 82 (162)
++.....+...|.+++|+|++++|++++.||.|++|+++......+....+.+|. ..|.+++|+| ++.+
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~d~~~ 73 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHD---------SSIVAIDWASPEYGRI 73 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCS---------SCEEEEEECCGGGCSE
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCC---------CcEEEEEEcCCCCCCE
Confidence 3455667788999999999999999999999999988875442223444444444 4799999999 5899
Q ss_pred EEEecCCCeEEEEeCCCc---------cceeeeeecccceeEE-EcCC--CCEEEEecCCCeEEEEeCCCceeeeeec--
Q psy1859 83 FATGGSDGYVNIWDGFNK---------KRLCQFHRYDTGITSL-FHQE--YNTFATGGSDGYVNIWDGFNKKRLCQFH-- 148 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~---------~~~~~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~-- 148 (162)
|++++.|+.|++||++.+ +.+..+..|...+.++ |+|+ +.++++++.|+.|++||+++++.+..+.
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 153 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLT 153 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEE
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccc
Confidence 999999999999999876 4466777889999999 9999 9999999999999999998876544332
Q ss_pred -----------cCCCceeEEEecCC
Q psy1859 149 -----------RYDTGITSLCFSYD 162 (162)
Q Consensus 149 -----------~~~~~v~~v~~~pd 162 (162)
.|...+.+++|+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~p~ 178 (351)
T 3f3f_A 154 SEMKVLSIPPANHLQSDFCLSWCPS 178 (351)
T ss_dssp EEEESCSCCCSSCSCCCEEEEECCC
T ss_pred ccccccccccCCcccceeEEEeccC
Confidence 57778999999884
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=3e-26 Score=156.71 Aligned_cols=141 Identities=16% Similarity=0.181 Sum_probs=105.2
Q ss_pred ccccccEEEEEEeeCCCeEEEEcC------CCcEEEEEecCCccccee--eeeeeeeeeccCcccceeceEEEEecCCCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSI------EGRAAVEYLDTGPEMQKM--KYAFKCHRIKEDGIEKIYPVNAISFHQEYN 81 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~------~g~i~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 81 (162)
..++.+|.+++|+|||++|++++. |+.+++ |+..+..... ...... |...|.+++|+|++.
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~--~~~~~~~~~~~~~~~~~~---------~~~~V~~~~~s~d~~ 107 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWV--FKDPEGAPNESLCTAGVQ---------TEAGVTDVAWVSEKG 107 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEE--ESSCC---CGGGCSEEEE---------CSSCEEEEEEETTTE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEE--EECCCCCcceeEecccCC---------CCCCEEEEEEcCCCC
Confidence 346788999999999999999987 556666 5543321211 111122 445799999999875
Q ss_pred EEEEecCCCeEEEEeCCCcccee----eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeE
Q psy1859 82 TFATGGSDGYVNIWDGFNKKRLC----QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS 156 (162)
Q Consensus 82 ~l~~~~~d~~v~~wd~~~~~~~~----~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 156 (162)
+++++.|+.|++||+.+++... ....|...|.++ |+|++++|++++.|+.|++||+++++.+..+..|...|++
T Consensus 108 -~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 186 (357)
T 4g56_B 108 -ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNC 186 (357)
T ss_dssp -EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred -EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 5567789999999999876443 233678899999 9999999999999999999999999999999999999999
Q ss_pred EEecCC
Q psy1859 157 LCFSYD 162 (162)
Q Consensus 157 v~~~pd 162 (162)
++|+|+
T Consensus 187 v~~s~~ 192 (357)
T 4g56_B 187 VAACPG 192 (357)
T ss_dssp EEECTT
T ss_pred EEEccC
Confidence 999985
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=1.9e-25 Score=149.21 Aligned_cols=142 Identities=15% Similarity=0.156 Sum_probs=115.4
Q ss_pred ccccccEEEEEEeeC--CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEE
Q psy1859 10 SSLKFQTRCIKCFPN--KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFAT 85 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~--~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~ 85 (162)
..+.+.+.+++|+++ +++|++|+.|++|+||+..... ......+..|. ..|.+++|+|+ +.+|++
T Consensus 50 ~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~--~~~~~~~~~h~---------~~v~~v~~~p~~~g~~l~s 118 (297)
T 2pm7_B 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR--WSQIAVHAVHS---------ASVNSVQWAPHEYGPMLLV 118 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC--BCCCEEECCCS---------SCEEEEEECCGGGCSEEEE
T ss_pred ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc--eEEEEEeecCC---------CceeEEEeCcCCCCcEEEE
Confidence 345677899999863 8999999999999997765432 23333334443 47999999997 789999
Q ss_pred ecCCCeEEEEeCCCccc--eeeeeecccceeEE-EcCC-------------CCEEEEecCCCeEEEEeCCCce----eee
Q psy1859 86 GGSDGYVNIWDGFNKKR--LCQFHRYDTGITSL-FHQE-------------YNTFATGGSDGYVNIWDGFNKK----RLC 145 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~--~~~~~~~~~~v~~~-~~~~-------------~~~l~~~~~d~~i~iwd~~~~~----~~~ 145 (162)
++.|+.|++||++.+.. ...+..|...+.++ |+|+ +++|++++.|+.|++||+++++ ...
T Consensus 119 ~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~ 198 (297)
T 2pm7_B 119 ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 198 (297)
T ss_dssp EETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred EECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEE
Confidence 99999999999987632 35567888999999 9996 5799999999999999998765 566
Q ss_pred eeccCCCceeEEEecCC
Q psy1859 146 QFHRYDTGITSLCFSYD 162 (162)
Q Consensus 146 ~~~~~~~~v~~v~~~pd 162 (162)
.+.+|...|.+++|+|+
T Consensus 199 ~l~~H~~~V~~v~~sp~ 215 (297)
T 2pm7_B 199 TLEGHSDWVRDVAWSPT 215 (297)
T ss_dssp EECCCSSCEEEEEECCC
T ss_pred EecCCCCceEEEEECCC
Confidence 78899999999999995
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=2.9e-25 Score=148.90 Aligned_cols=141 Identities=19% Similarity=0.216 Sum_probs=121.4
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
...+...+.+++|+|++++|++++.|+.+++|+++. .+....+.+|.. .|.+++|+|++++|++++.
T Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~----~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~~~ 127 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS----GKCLKTLKGHSN---------YVFCCNFNPQSNLIVSGSF 127 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----CCEEEEEECCSS---------CEEEEEECSSSSEEEEEET
T ss_pred hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC----CcEEEEEcCCCC---------CEEEEEEcCCCCEEEEEeC
Confidence 344567789999999999999999999999976654 334444555543 7999999999999999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec-cCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~pd 162 (162)
|+.|++||+++++.+..+..|...+.++ |+|+++++++++.|+.|++||+++++.+..+. .+...+..++|+|+
T Consensus 128 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (312)
T 4ery_A 128 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 203 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTT
T ss_pred CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCC
Confidence 9999999999999999998899999999 99999999999999999999999988777664 45668999999986
No 28
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=2.7e-25 Score=151.78 Aligned_cols=139 Identities=19% Similarity=0.324 Sum_probs=116.4
Q ss_pred cccccEEEEEEee--CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 11 SLKFQTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.+...+.+++++| +++.|++|+.||.+++|+... .+....+..|.. .|.+++|+|++.+|++++.
T Consensus 194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~----~~~~~~~~~h~~---------~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS----GQCVQAFETHES---------DVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT----CCEEEEECCCSS---------CEEEEEECTTSSEEEEEET
T ss_pred CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC----CcEEEEecCCCC---------CeEEEEEeCCCCEEEEEeC
Confidence 3456678888887 478999999999999966554 334444455443 7999999999999999999
Q ss_pred CCeEEEEeCCCccceeeeeec--ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRY--DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~--~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+.|++||++.++.+..+..+ ...+.++ |+|+++++++++.|+.|++||+.+++.+..+.+|.+.|++++|+||
T Consensus 261 D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 261 DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC
Confidence 999999999988766655433 3467888 9999999999999999999999999999999999999999999997
No 29
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=1.3e-25 Score=155.48 Aligned_cols=143 Identities=14% Similarity=0.131 Sum_probs=121.9
Q ss_pred cccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccc---eeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEE
Q psy1859 11 SLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQ---KMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFAT 85 (162)
Q Consensus 11 ~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~ 85 (162)
.+...+.+++|+| ++++|++|+.||.|+||+++...... .....+.+|. ..|.+++|+|++ .+|++
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~---------~~v~~~~~~p~~~~~l~s 149 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT---------KRVGIVAWHPTAQNVLLS 149 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS---------SCEEEEEECSSBTTEEEE
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC---------CeEEEEEECcCCCCEEEE
Confidence 4567889999999 89999999999999998776542100 2334444444 479999999998 79999
Q ss_pred ecCCCeEEEEeCCCccceeee--eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee-ccCCCc-eeEEEec
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQF--HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF-HRYDTG-ITSLCFS 160 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~--~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~-v~~v~~~ 160 (162)
++.|+.|++||+++++.+..+ ..|...+.++ |+|++++|++++.|+.|++||+++++.+..+ ..|.+. +.++.|+
T Consensus 150 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV 229 (402)
T ss_dssp EETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC
T ss_pred EcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc
Confidence 999999999999999988888 7789999999 9999999999999999999999999998888 678775 8999999
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
||
T Consensus 230 ~~ 231 (402)
T 2aq5_A 230 SE 231 (402)
T ss_dssp ST
T ss_pred CC
Confidence 86
No 30
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=3.5e-25 Score=149.31 Aligned_cols=138 Identities=14% Similarity=0.147 Sum_probs=119.2
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+...+.+++|+|+++++++++.|++|++|+... .+....+.+|.. .|.+++|+|++.++++++.|+
T Consensus 63 ~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~----~~~~~~~~~h~~---------~v~~~~~~~~~~~l~s~s~D~ 129 (319)
T 3frx_A 63 GHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT----GETYQRFVGHKS---------DVMSVDIDKKASMIISGSRDK 129 (319)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCSS---------CEEEEEECTTSCEEEEEETTS
T ss_pred CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC----CCeeEEEccCCC---------cEEEEEEcCCCCEEEEEeCCC
Confidence 4556788999999999999999999999966543 344455555544 799999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCC------CCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQE------YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++||++ ++.+..+..|...+.++ |+|. +.++++++.|+.|++||+++++....+.+|...|.+++|+||
T Consensus 130 ~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 130 TIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPD 207 (319)
T ss_dssp CEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTT
T ss_pred eEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCC
Confidence 99999997 45677778899999999 9884 458999999999999999999999889999999999999996
No 31
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=1.8e-25 Score=162.22 Aligned_cols=139 Identities=19% Similarity=0.268 Sum_probs=116.7
Q ss_pred cccccEEEEEEeeCCC-eEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 11 SLKFQTRCIKCFPNKQ-GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~-~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
.+...+.+++|+|++. .|++++.|+++++|+.. . .+....+.+|.. .|.+++|+|++++|++++.|
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~--~--~~~~~~l~~H~~---------~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP--P--FKFKSTFGEHTK---------FVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT--T--BEEEEEECCCSS---------CEEEEEECTTSSEEEEEETT
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC--C--CeEeeeeccccC---------ceEEEEECCCCCEEEEEECC
Confidence 3456789999999987 59999999999996543 3 344445555544 79999999999999999999
Q ss_pred CeEEEEeCCCccceeeee-------ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee---------------
Q psy1859 90 GYVNIWDGFNKKRLCQFH-------RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ--------------- 146 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~-------~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--------------- 146 (162)
+.|++||+.+++.+..+. .|...|.++ |+|++++|++++.|++|++||+++++++.+
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 291 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence 999999999988877763 688999999 999999999999999999999988765433
Q ss_pred ----------------------------eccCCCceeEEEecCC
Q psy1859 147 ----------------------------FHRYDTGITSLCFSYD 162 (162)
Q Consensus 147 ----------------------------~~~~~~~v~~v~~~pd 162 (162)
+.+|...|++++|+||
T Consensus 292 ~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd 335 (611)
T 1nr0_A 292 WTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD 335 (611)
T ss_dssp ECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC
Confidence 3468889999999986
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=1.5e-25 Score=154.27 Aligned_cols=140 Identities=19% Similarity=0.272 Sum_probs=115.9
Q ss_pred cccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 11 SLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 11 ~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
.+...+.++++++ ++++|++|+.|+.|++|+.... ......+.+|. ..|.+++|+|++++|++++.|
T Consensus 203 ~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~---~~~~~~~~~h~---------~~v~~v~~~p~~~~l~s~s~D 270 (380)
T 3iz6_a 203 GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT---SRAVRTYHGHE---------GDINSVKFFPDGQRFGTGSDD 270 (380)
T ss_dssp SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT---CCCCEEECCCS---------SCCCEEEECTTSSEEEEECSS
T ss_pred CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC---CcceEEECCcC---------CCeEEEEEecCCCeEEEEcCC
Confidence 3456688899987 7899999999999999776532 23334444544 479999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecc-------cceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee----ccCCCceeEE
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYD-------TGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF----HRYDTGITSL 157 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~-------~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~v~~v 157 (162)
+.|++||+++++.+..+..+. ..++++ |+|+|+++++|+.|+.|++||+.+++.+..+ .+|.+.|+++
T Consensus 271 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 271 GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 999999999988777665332 247889 9999999999999999999999988877766 5799999999
Q ss_pred EecCC
Q psy1859 158 CFSYD 162 (162)
Q Consensus 158 ~~~pd 162 (162)
+|+||
T Consensus 351 ~~s~d 355 (380)
T 3iz6_a 351 GLSSD 355 (380)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 99996
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=6.2e-26 Score=158.65 Aligned_cols=141 Identities=12% Similarity=0.063 Sum_probs=111.6
Q ss_pred ccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEEec
Q psy1859 10 SSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATGG 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~ 87 (162)
..+...|+||+|+| +++.|++|+.||.|+||+++..+ ......+.+| ...|.+++|+| ++.+|++++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~--~~~~~~~~gH---------~~~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD--KPTFIKGIGA---------GGSITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS--CCEEECCCSS---------SCCCCEEEECSSCTTEEEEEC
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC--ceeEEEccCC---------CCCEEEEEEeCCCCCEEEEEe
Confidence 34556799999999 46789999999999997766543 3334444444 44899999998 578999999
Q ss_pred CCCeEEEEeCCCccceeeee--ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFH--RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|+.|++||++.+....... .+...+.++ |+|++++|++|+.|+.|++||++ ++.+..+.+|...|++++|+|+
T Consensus 185 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 185 MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTT
T ss_pred CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCC
Confidence 99999999998654322222 233456788 99999999999999999999996 4567778899999999999985
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=4.5e-25 Score=152.56 Aligned_cols=134 Identities=16% Similarity=0.269 Sum_probs=115.2
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
.+.+++|+|++++|++|+.|+.|+||+.+. .+....+.+|.. .|.+++|+|++..|++++.|+.|++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~----~~~~~~~~~h~~---------~v~~~~~~p~~~~l~s~s~d~~v~i 191 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIEN----RKIVMILQGHEQ---------DIYSLDYFPSGDKLVSGSGDRTVRI 191 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTT----TEEEEEECCCSS---------CEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCC----CcEEEEEccCCC---------CEEEEEEcCCCCEEEEecCCCcEEE
Confidence 488999999999999999999999966543 344445555544 7999999999999999999999999
Q ss_pred EeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeee-------ccCCCceeEEEecCC
Q psy1859 95 WDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQF-------HRYDTGITSLCFSYD 162 (162)
Q Consensus 95 wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~-------~~~~~~v~~v~~~pd 162 (162)
||+++++....+. +...+.++ |+| +++++++++.|+.|++||+++++.+..+ .+|...|++++|+||
T Consensus 192 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 192 WDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred EECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 9999988776665 45678888 999 9999999999999999999998877766 578899999999986
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.94 E-value=1.1e-26 Score=159.33 Aligned_cols=140 Identities=14% Similarity=0.133 Sum_probs=111.9
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
.++.+.+++|+|++++|++++.|+.|+||+.+... .+....+.+|. ..|.+++|+|++++|++++.|+.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~h~---------~~v~~~~~s~~~~~l~s~s~d~~ 78 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG--WKHARTFSDHD---------KIVTCVDWAPKSNRIVTCSQDRN 78 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE--EEECCCBCCCS---------SCEEEEEECTTTCCEEEEETTSS
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc--eEEEEEEecCC---------ceEEEEEEeCCCCEEEEEeCCCe
Confidence 45678999999999999999999999998776432 24444555554 37999999999999999999999
Q ss_pred EEEEeCCCcc---ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce---eeeeecc-CCCceeEEEecCC
Q psy1859 92 VNIWDGFNKK---RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK---RLCQFHR-YDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~~~---~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~-~~~~v~~v~~~pd 162 (162)
|++||+.+++ ....+..|...+.++ |+|++++|++++.|+.|++||+++++ ....+.. |...|++++|+||
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 9999999876 566677889999999 99999999999999999999999876 3666776 9999999999986
No 36
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=3.4e-25 Score=164.61 Aligned_cols=146 Identities=17% Similarity=0.197 Sum_probs=127.5
Q ss_pred ccceeeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCE
Q psy1859 3 YIMQRRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNT 82 (162)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 82 (162)
-..++....+...+.+++|+|+++++++++.+|.|+||+++. ......+..|.. +|.+++|+|++++
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~----~~~~~~~~~~~~---------~v~~~~~s~~~~~ 69 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET----QVEVRSIQVTET---------PVRAGKFIARKNW 69 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT----TEEEEEEECCSS---------CEEEEEEEGGGTE
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCC----CceEEEEecCCC---------cEEEEEEeCCCCE
Confidence 344555666778899999999999999999999999976554 334444455443 7999999999999
Q ss_pred EEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEEEec
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~ 160 (162)
|++++.|+.|++||+.+++.+..+..|...+.++ |+|+++++++++.|+.|++||+.++ .....+..|...|.+++|+
T Consensus 70 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~ 149 (814)
T 3mkq_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (814)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEE
Confidence 9999999999999999999999999999999999 9999999999999999999999877 6677888999999999999
Q ss_pred C
Q psy1859 161 Y 161 (162)
Q Consensus 161 p 161 (162)
|
T Consensus 150 p 150 (814)
T 3mkq_A 150 P 150 (814)
T ss_dssp T
T ss_pred c
Confidence 8
No 37
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=3.9e-25 Score=151.63 Aligned_cols=139 Identities=12% Similarity=-0.000 Sum_probs=109.3
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC-
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG- 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~- 90 (162)
....+.+++|+|+++++++++.++ +.+|...... ......... |...|.+++|+|++..+++++.|+
T Consensus 175 ~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~--~~~~~~~~~---------~~~~v~~v~fspdg~~l~~~s~d~~ 242 (365)
T 4h5i_A 175 TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS--CIARKTDFD---------KNWSLSKINFIADDTVLIAASLKKG 242 (365)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC--EEEEECCCC---------TTEEEEEEEEEETTEEEEEEEESSS
T ss_pred CCCceEEEEEccCCceEEecccee-EEEEEeccCc--ceeeeecCC---------CCCCEEEEEEcCCCCEEEEEecCCc
Confidence 456789999999999999988665 4554332221 222222222 344799999999999999998776
Q ss_pred ---eEEEEeCCCccc----eeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee-ccCCCceeEEEecC
Q psy1859 91 ---YVNIWDGFNKKR----LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF-HRYDTGITSLCFSY 161 (162)
Q Consensus 91 ---~v~~wd~~~~~~----~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~v~~~p 161 (162)
.+++|++..... ...+..|...|+++ |+|+|++|++|+.|++|+|||+++++++.++ .+|...|++|+|+|
T Consensus 243 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp 322 (365)
T 4h5i_A 243 KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP 322 (365)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT
T ss_pred ceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC
Confidence 688899876532 34566788899999 9999999999999999999999999998875 78999999999999
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
|
T Consensus 323 d 323 (365)
T 4h5i_A 323 D 323 (365)
T ss_dssp T
T ss_pred C
Confidence 7
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.4e-25 Score=149.74 Aligned_cols=143 Identities=13% Similarity=0.102 Sum_probs=121.3
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEE
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFAT 85 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~ 85 (162)
....+...+.+++|+|++++|++++.||.|+||+++... ......+.+|.. .|.+++|+|+ +.+|++
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~---------~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEG---------PVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSS---------CEEEEEECCGGGCSEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc--ceeeeEecCCCC---------cEEEEEeCCCCCCCEEEE
Confidence 344567889999999999999999999999998877544 444555555543 7999999987 899999
Q ss_pred ecCCCeEEEEeCCCcc--ceeeeeecccceeEE-EcCC--CCEEEEecCCCeEEEEeCCCce--eeeeeccCCCceeEEE
Q psy1859 86 GGSDGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQE--YNTFATGGSDGYVNIWDGFNKK--RLCQFHRYDTGITSLC 158 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~v~ 158 (162)
++.|+.|++||+.+++ .+..+..|...+.++ |+|+ +.++++++.|+.|++||++++. ....+..|...|.+++
T Consensus 75 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 75 CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEE
T ss_pred eccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEE
Confidence 9999999999999886 667777788999999 9998 9999999999999999998873 3445668999999999
Q ss_pred ecC
Q psy1859 159 FSY 161 (162)
Q Consensus 159 ~~p 161 (162)
|+|
T Consensus 155 ~~~ 157 (379)
T 3jrp_A 155 WAP 157 (379)
T ss_dssp ECC
T ss_pred EcC
Confidence 998
No 39
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=3e-24 Score=145.96 Aligned_cols=139 Identities=14% Similarity=0.231 Sum_probs=113.7
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|++.++++++.|++|++|++.. .+....+.+|.. .|.+++|+|++++|++++.|
T Consensus 73 ~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~----~~~~~~~~~h~~---------~v~~v~~sp~~~~l~s~~~d 139 (343)
T 2xzm_R 73 TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT----GTTYKRFVGHQS---------EVYSVAFSPDNRQILSAGAE 139 (343)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS----SCEEEEEECCCS---------CEEEEEECSSTTEEEEEETT
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC----CcEEEEEcCCCC---------cEEEEEECCCCCEEEEEcCC
Confidence 34556789999999999999999999999966553 334445555544 79999999999999999999
Q ss_pred CeEEEEeCCCcccee--eeeecccceeEE-EcCCC----------CEEEEecCCCeEEEEeCCCceeeeeeccCCCceeE
Q psy1859 90 GYVNIWDGFNKKRLC--QFHRYDTGITSL-FHQEY----------NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS 156 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~--~~~~~~~~v~~~-~~~~~----------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 156 (162)
+.|++||+....... ....|...+.++ |+|++ .++++++.|+.|++||. +.+....+..|...|.+
T Consensus 140 ~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 140 REIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNH 218 (343)
T ss_dssp SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEE
T ss_pred CEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceE
Confidence 999999998432221 112577889999 99987 79999999999999995 56777788899999999
Q ss_pred EEecCC
Q psy1859 157 LCFSYD 162 (162)
Q Consensus 157 v~~~pd 162 (162)
++|+||
T Consensus 219 ~~~s~~ 224 (343)
T 2xzm_R 219 LSISPN 224 (343)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999996
No 40
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=1.8e-24 Score=149.01 Aligned_cols=141 Identities=16% Similarity=0.252 Sum_probs=121.1
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeee---eeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKC---HRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
.....+.+++|+|++ .+++++.+|.+++|+... .+....+.. |.. ....|.+++|+|++++|++++
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~h~~------~~~~i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGFNNGTVQISELST----LRPLYNFESQHSMIN------NSNSIRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT----TEEEEEEECCC---C------CCCCEEEEEECSSTTEEEEEE
T ss_pred CCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC----CceeEEEeccccccc------cCCccceEEECCCCCEEEEEe
Confidence 346678999999999 999999999999966543 344445554 400 023799999999999999999
Q ss_pred CC---CeEEEEeCCCccceeeeee-------------cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec--
Q psy1859 88 SD---GYVNIWDGFNKKRLCQFHR-------------YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-- 148 (162)
Q Consensus 88 ~d---~~v~~wd~~~~~~~~~~~~-------------~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-- 148 (162)
.| +.|++||+++++.+..+.. |...+.++ |+|++++|++++.|+.|++||+++++.+..+.
T Consensus 253 ~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 332 (397)
T 1sq9_A 253 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH 332 (397)
T ss_dssp EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecc
Confidence 99 9999999999998888888 89999999 99999999999999999999999999999998
Q ss_pred ----cC---------------CCceeEEEecCC
Q psy1859 149 ----RY---------------DTGITSLCFSYD 162 (162)
Q Consensus 149 ----~~---------------~~~v~~v~~~pd 162 (162)
.| ...|++++|+||
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 333 CDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp GGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred cCcccchhhhhccccccccccCCceeEEEeccc
Confidence 77 899999999986
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=1.7e-24 Score=147.81 Aligned_cols=144 Identities=15% Similarity=0.160 Sum_probs=121.4
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|+++++++++.++.+++|+++.............. |...|.+++|+|++++|++++.|
T Consensus 93 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKP---------IRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTT---------CCSCEEEEEECTTSSEEEEEETT
T ss_pred ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecc---------cCCCeeEEEEcCCCCEEEEEcCC
Confidence 345677899999999999999999999999888765411111111112 44479999999999999999999
Q ss_pred CeEEEEeCC------------------CccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC
Q psy1859 90 GYVNIWDGF------------------NKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY 150 (162)
Q Consensus 90 ~~v~~wd~~------------------~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 150 (162)
+.|++||++ .++.+..+..|...+.++ |+|+++++++++.|+.|++||+++++.+..+..|
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 999999954 567777888888999999 9999999999999999999999999999999999
Q ss_pred CCceeEEEecCC
Q psy1859 151 DTGITSLCFSYD 162 (162)
Q Consensus 151 ~~~v~~v~~~pd 162 (162)
...|.+++|+||
T Consensus 244 ~~~v~~~~~~~~ 255 (372)
T 1k8k_C 244 TLPLLAVTFITE 255 (372)
T ss_dssp SCCEEEEEEEET
T ss_pred CCCeEEEEEecC
Confidence 999999999986
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=5.6e-24 Score=143.34 Aligned_cols=140 Identities=19% Similarity=0.285 Sum_probs=120.8
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.....+.+++|+|+++++++++.++.+++|+.+... ......+..+. ..+.+++|+|+++++++++.|+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg 163 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT--PRIKAELTSSA---------PACYALAISPDSKVCFSCCSDG 163 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC----EEEEEEECSS---------SCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC--cceeeecccCC---------CceEEEEECCCCCEEEEEeCCC
Confidence 456788999999999999999999999997765433 33444444443 3799999999999999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++||+++++.+..+..|...+.++ |+|+++++++++.|+.|++||+++++.+..+. +...+.+++|+||
T Consensus 164 ~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPT 235 (337)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTT
T ss_pred cEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCC
Confidence 99999999999898998899999999 99999999999999999999999998887765 7778999999986
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=2.2e-24 Score=154.97 Aligned_cols=139 Identities=18% Similarity=0.274 Sum_probs=118.7
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
....+...|++++|+|+|++|++|+.|+.|+||+.+ .+....+.+|.. .|.+++|+|++++|++++
T Consensus 11 ~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-----~~~~~~l~gh~~---------~V~~l~fspdg~~las~~ 76 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-----GQLLQTLTGHSS---------SVWGVAFSPDGQTIASAS 76 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-----SCEEEEEECCSS---------CEEEEEECTTSSEEEEEE
T ss_pred EECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-----CCEEEEEeCCCC---------CEEEEEECCCCCEEEEEe
Confidence 345567889999999999999999999999996532 344555666554 799999999999999999
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|+.|++||. +++.+..+..|...|.++ |+|+++++++++.|+.+++|+.... .......+...|.++.|+||
T Consensus 77 ~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~ 150 (577)
T 2ymu_A 77 DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-LLQTLTGHSSSVWGVAFSPD 150 (577)
T ss_dssp TTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCC-EEEEECCCSSCEEEEEECTT
T ss_pred CCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccc-eeeeccCCCCceeeeeeecC
Confidence 9999999996 577888899999999999 9999999999999999999998654 45556778889999999885
No 44
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.4e-25 Score=156.31 Aligned_cols=138 Identities=10% Similarity=0.025 Sum_probs=114.8
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEE--EecCCC-CEEEEecC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAI--SFHQEY-NTFATGGS 88 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~p~~-~~l~~~~~ 88 (162)
....+.+++|+++ ..|++|+.||+|++|+..... .....+.+|. ..|.++ +|+|++ .+|++++.
T Consensus 265 h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~---~~~~~~~~H~---------~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 265 ADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPE---VPSFYDQVHD---------SYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp TTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCS---SCSEEEECSS---------SCEEEEEEECCTTSCCEEEEEET
T ss_pred CCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCC---CceEEeeccc---------ccEEEEEEEcCCCCCeEEEEecc
Confidence 4577899999986 479999999999997665321 2223344444 479999 678887 89999999
Q ss_pred CCeEEEEeCCCccceeeeeeccc--ceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDT--GITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~--~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+.|++||+++++....+..|.. .+.++ |+|+++.+++++.|++|++||++++.++..+.+|.+.|++|+|+||
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred CCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 99999999999888777766643 47788 9999999999999999999999999888888899999999999996
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=5.3e-25 Score=150.91 Aligned_cols=141 Identities=14% Similarity=0.140 Sum_probs=110.8
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+...+.+++|+|++++|++++.|+.+++|+++... .......+..| ...|.+++|+|++++|++++.|+
T Consensus 53 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~ 122 (377)
T 3dwl_C 53 DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG-TWKQTLVLLRL---------NRAATFVRWSPNEDKFAVGSGAR 122 (377)
T ss_dssp CCSSCEEEEEECTTTCCEEEEETTSSEEEC-------CCCCEEECCCC---------SSCEEEEECCTTSSCCEEEESSS
T ss_pred cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-ceeeeeEeccc---------CCceEEEEECCCCCEEEEEecCC
Confidence 456778999999999999999999999996655321 01123333333 34799999999999999999999
Q ss_pred eEEEEeCCCcc---ceeeeee-cccceeEE-EcCCCCEEEEecCCCeEEEEeCC------------------Cceeeeee
Q psy1859 91 YVNIWDGFNKK---RLCQFHR-YDTGITSL-FHQEYNTFATGGSDGYVNIWDGF------------------NKKRLCQF 147 (162)
Q Consensus 91 ~v~~wd~~~~~---~~~~~~~-~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~------------------~~~~~~~~ 147 (162)
.|++||++.++ ....+.. |...+.++ |+|+++++++++.|+.|++||++ .++++..+
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (377)
T 3dwl_C 123 VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY 202 (377)
T ss_dssp CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC
T ss_pred eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc
Confidence 99999999876 3666766 89999999 99999999999999999999985 35566667
Q ss_pred ccCCCceeEEEecCC
Q psy1859 148 HRYDTGITSLCFSYD 162 (162)
Q Consensus 148 ~~~~~~v~~v~~~pd 162 (162)
.|...|++++|+||
T Consensus 203 -~~~~~v~~~~~sp~ 216 (377)
T 3dwl_C 203 -PSGGWVHAVGFSPS 216 (377)
T ss_dssp -CCSSSEEEEEECTT
T ss_pred -cCCceEEEEEECCC
Confidence 89999999999996
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=1.2e-24 Score=151.01 Aligned_cols=140 Identities=16% Similarity=0.247 Sum_probs=116.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|++++|++++.|+.|++|+.+. .+....+.+|. ..|.+++|+|++.+|++++.|
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~----~~~~~~~~~h~---------~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD----GSNPRTLIGHR---------ATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----CCCCEEEECCS---------SCEEEEEEETTTTEEEEEETT
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC----CcCceEEcCCC---------CcEEEEEEcCCCCEEEEEcCC
Confidence 45678899999999999999999999999976654 23344444444 379999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeec------------------------ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceee
Q psy1859 90 GYVNIWDGFNKKRLCQFHRY------------------------DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRL 144 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~------------------------~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 144 (162)
+.|++||+++++.+..+..+ ...+.++ |+|+++++++++.|+.|++||+++++.+
T Consensus 203 ~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 282 (420)
T 3vl1_A 203 GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT 282 (420)
T ss_dssp SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE
T ss_pred CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 99999999998887777642 2344555 7899999999999999999999998876
Q ss_pred eeec-cCCCceeEEEecCC
Q psy1859 145 CQFH-RYDTGITSLCFSYD 162 (162)
Q Consensus 145 ~~~~-~~~~~v~~v~~~pd 162 (162)
..+. .|...|++++|+|+
T Consensus 283 ~~~~~~~~~~v~~~~~~~~ 301 (420)
T 3vl1_A 283 IQLPSKFTCSCNSLTVDGN 301 (420)
T ss_dssp EEECCTTSSCEEEEEECSS
T ss_pred EEcccccCCCceeEEEeCC
Confidence 6664 57889999999986
No 47
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=3.8e-24 Score=147.07 Aligned_cols=141 Identities=13% Similarity=0.096 Sum_probs=115.5
Q ss_pred eccccccEEEEEEeeCC-CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEEe
Q psy1859 9 ESSLKFQTRCIKCFPNK-QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATG 86 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~-~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~ 86 (162)
...+...+.+++|+|++ ++|++|+.||.|+||+++... ........+ |...|.+++|+| ++.+|+++
T Consensus 69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~---------h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN--KTSFIQGMG---------PGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT--CEEEECCCS---------TTCBEEEEEEETTEEEEEEEE
T ss_pred ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc--cceeeecCC---------cCCceeEEEeCCCCCCEEEEE
Confidence 34566789999999998 899999999999997766433 333332223 444899999999 67999999
Q ss_pred cCCCeEEEEeCCCccceeeeeec---ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRY---DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~---~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|+.|++||++. ..+..+..+ ...+.++ |+|+++++++++.|+.|++||+ +++.+..+..|...|.+++|+|+
T Consensus 138 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 138 SIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp ETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSS
T ss_pred eCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCC
Confidence 9999999999985 444444433 4779999 9999999999999999999999 57788888999999999999986
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=6.5e-24 Score=143.01 Aligned_cols=143 Identities=15% Similarity=0.182 Sum_probs=118.9
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+...+.+++|+|+++++++++ ||.+++|+++.... ......+... .|...|.+++|+|+++++++++.|+
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~-~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~ 119 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN-KSPVSQLDCL-------NRDNYIRSCKLLPDGCTLIVGGEAS 119 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC-CSCSEEEECS-------CTTSBEEEEEECTTSSEEEEEESSS
T ss_pred cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc-eeeeeccccc-------CCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 4667889999999999999998 99999987765331 1111222211 1444799999999999999999999
Q ss_pred eEEEEeCCCcc--ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKK--RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++||+.+++ ....+..+...+.++ |+|+++++++++.|+.|++||+++++.+..+..|...|.+++|+||
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 194 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND 194 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCC
Confidence 99999999876 456677788899999 9999999999999999999999999999999999999999999986
No 49
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.93 E-value=1.6e-24 Score=149.26 Aligned_cols=150 Identities=21% Similarity=0.241 Sum_probs=117.6
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeee----------------------------
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRI---------------------------- 60 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~---------------------------- 60 (162)
...+.+.|.+++|+|++++|++|+.||+|+||+..... ....+..|..
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~----~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ----KTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE----EEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----cceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 34566789999999999999999999999997754322 2222222211
Q ss_pred ------------ccCcccceeceEEEEecCCC-CEEEEecCCCeEEEEeCCCccceeee-----eecccceeEE-EcC-C
Q psy1859 61 ------------KEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVNIWDGFNKKRLCQF-----HRYDTGITSL-FHQ-E 120 (162)
Q Consensus 61 ------------~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~~~~~-----~~~~~~v~~~-~~~-~ 120 (162)
.....+|...|.++.|+|++ ..|++++.|+.|++||+++++.+..+ ..|...+.++ |++ +
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence 00123567778888888875 67889999999999999988777665 4677889999 876 8
Q ss_pred CCEEEEecCCCeEEEEeCC-CceeeeeeccCCCceeEEEecCC
Q psy1859 121 YNTFATGGSDGYVNIWDGF-NKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 121 ~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.++++|+.|+.|++||++ .++.+..+.+|.+.|++++|+||
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~ 260 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD 260 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC
Confidence 8999999999999999998 45678888999999999999996
No 50
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=5.9e-24 Score=144.67 Aligned_cols=141 Identities=21% Similarity=0.299 Sum_probs=114.6
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEe--cCCCCEEEE
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISF--HQEYNTFAT 85 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~l~~ 85 (162)
....+...+.+++|+|++++|++++.||.|++|+.+... .. .+..| ...|.+++| +|++.+|++
T Consensus 81 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----~~-~~~~~---------~~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 81 AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ----AI-QIAQH---------DAPVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----EE-EEEEC---------SSCEEEEEEEECSSCEEEEE
T ss_pred EeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC----ce-eeccc---------cCceEEEEEEeCCCCCEEEE
Confidence 344567889999999999999999999999997665432 22 22333 347999999 899999999
Q ss_pred ecCCCeEEEEeCCCccceeee-----------------------------------------------------------
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQF----------------------------------------------------------- 106 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~----------------------------------------------------------- 106 (162)
++.|+.|++||+++++.+..+
T Consensus 147 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (368)
T 3mmy_A 147 GSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQN 226 (368)
T ss_dssp EETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTS
T ss_pred ccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCC
Confidence 999999999999865432211
Q ss_pred -------------------------------eeccc------------ceeEE-EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 107 -------------------------------HRYDT------------GITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 107 -------------------------------~~~~~------------~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
..|.. .+.++ |+|++++|++++.|+.|++||+++++
T Consensus 227 ~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 227 KPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART 306 (368)
T ss_dssp CEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred CCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc
Confidence 11222 58888 99999999999999999999999999
Q ss_pred eeeeeccCCCceeEEEecCC
Q psy1859 143 RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 143 ~~~~~~~~~~~v~~v~~~pd 162 (162)
++..+..|...|++++|+||
T Consensus 307 ~~~~~~~~~~~v~~~~~s~~ 326 (368)
T 3mmy_A 307 KLKTSEQLDQPISACCFNHN 326 (368)
T ss_dssp EEEECCCCSSCEEEEEECTT
T ss_pred EEEEecCCCCCceEEEECCC
Confidence 99999999999999999996
No 51
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=6.7e-24 Score=146.69 Aligned_cols=144 Identities=16% Similarity=0.200 Sum_probs=114.6
Q ss_pred ccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 12 LKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
....+.+++++| +++++++++.|+.|++|+.... .....+.... ....+|...|.+++|+|++++|++++.|+
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~----~~~~~~~~~~--~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG----FLVERLDSEN--ESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC----CEEEEEC--------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC----cEEEeecccc--cCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 456688999999 8999999999999999665432 2222221110 11234666899999999999999999999
Q ss_pred eEEEEeCCCc------------cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEE
Q psy1859 91 YVNIWDGFNK------------KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL 157 (162)
Q Consensus 91 ~v~~wd~~~~------------~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v 157 (162)
.|++||+++. .+...+.+|...+.++ |+|++++|++++.|+.|++||+++++.+..+.+|...|.++
T Consensus 279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 358 (393)
T ss_dssp EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEE
Confidence 9999999763 2344566788899999 99999999999999999999999999999999999999999
Q ss_pred EecC
Q psy1859 158 CFSY 161 (162)
Q Consensus 158 ~~~p 161 (162)
+|+|
T Consensus 359 ~~~~ 362 (393)
T 1erj_A 359 AVAN 362 (393)
T ss_dssp EECS
T ss_pred EecC
Confidence 9986
No 52
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=4.9e-24 Score=156.61 Aligned_cols=145 Identities=12% Similarity=0.115 Sum_probs=118.8
Q ss_pred eccccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCccc-ceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 9 ESSLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEM-QKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
...+.+.|.+++++|+ +++|++|+.|+.|++|+++..... ......+.+ |...|.+++|+|++++|+++
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~---------h~~~v~~v~~s~~g~~l~sg 448 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG---------HSHFVEDVVLSSDGQFALSG 448 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC---------CSSCEEEEEECTTSSEEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecC---------CCCcEEEEEECCCCCEEEEE
Confidence 4456778899999986 478999999999999877643211 112223344 44489999999999999999
Q ss_pred cCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee---ccCCCceeEEEecCC
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF---HRYDTGITSLCFSYD 162 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~v~~~pd 162 (162)
+.|+.|++||+.+++.+..+..|...|.++ |+|++++|++++.|++|++||+......... .+|...|.+++|+|+
T Consensus 449 s~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 449 SWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred eCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 999999999999999999999999999999 9999999999999999999998655433222 468889999999985
No 53
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.93 E-value=4.6e-24 Score=164.62 Aligned_cols=140 Identities=19% Similarity=0.191 Sum_probs=124.7
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|+++++++|+.||.|++|+... ......+.+|.. .|.+++|+|+++++++++.|
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~----~~~~~~~~~h~~---------~v~~~~~s~~~~~l~s~~~d 678 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET----GEKLLDIKAHED---------EVLCCAFSSDDSYIATCSAD 678 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----CCEEEEECCCSS---------CEEEEEECTTSSEEEEEETT
T ss_pred ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCC----CCEEEEeccCCC---------CEEEEEEecCCCEEEEEeCC
Confidence 44667899999999999999999999999966543 344455555544 79999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcC--CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ--EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|++||+.+++.+..+..|...+.++ |+| ++.++++++.|+.|++||+++++++..+.+|.+.|++++|+||
T Consensus 679 ~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~ 754 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD 754 (1249)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSS
T ss_pred CeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecC
Confidence 999999999999999999999999999 999 5668999999999999999999999999999999999999986
No 54
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=8.2e-24 Score=143.95 Aligned_cols=148 Identities=10% Similarity=0.065 Sum_probs=121.8
Q ss_pred eeeccccccEEEEEEeeC----CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC---
Q psy1859 7 RRESSLKFQTRCIKCFPN----KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--- 79 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~----~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--- 79 (162)
.....+...+.+++|+|+ ...+++++.++.|++|++... .....+..+... .|...|.+++|+|+
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~----~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~ 83 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQ----GEIRLLQSYVDA----DADENFYTCAWTYDSNT 83 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGG----GCEEEEEEEECS----CTTCCEEEEEEEECTTT
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCC----cEEEeeeecccc----CCCCcEEEEEeccCCCC
Confidence 344567788999999984 456777777789999776542 233333433321 14457999999999
Q ss_pred -CCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeee---ccCCCc
Q psy1859 80 -YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQF---HRYDTG 153 (162)
Q Consensus 80 -~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~ 153 (162)
+.+|++++.|+.|++||+.+++.+..+..|...+.++ |+| ++.++++++.|+.|++||+++++.+..+ ..|...
T Consensus 84 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 84 SHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 6699999999999999999999999999999999999 999 9999999999999999999999988887 689999
Q ss_pred eeEEEecCC
Q psy1859 154 ITSLCFSYD 162 (162)
Q Consensus 154 v~~v~~~pd 162 (162)
|.+++|+|+
T Consensus 164 v~~~~~~~~ 172 (366)
T 3k26_A 164 VLSADYDLL 172 (366)
T ss_dssp EEEEEECTT
T ss_pred eeEEEECCC
Confidence 999999986
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=2.9e-24 Score=147.32 Aligned_cols=122 Identities=7% Similarity=0.027 Sum_probs=97.5
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCc--EEEEEecCCccccee--eeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGR--AAVEYLDTGPEMQKM--KYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~--i~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
.....+.+++|+|+++.+++++.++. +.+|.|+........ ...+.+ |...|++++|+|++++|++|
T Consensus 217 ~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~---------~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 217 DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN---------RFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES---------SCSCEEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC---------CCCCeEeEEECCCCCceEEE
Confidence 34566889999999999999987763 344445543311221 122222 44489999999999999999
Q ss_pred cCCCeEEEEeCCCccceeee-eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 87 GSDGYVNIWDGFNKKRLCQF-HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
+.|+.|+|||+++++++..+ .+|...|+++ |+|||++|++++.|++|+|||+...
T Consensus 288 s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 288 SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999988875 6899999999 9999999999999999999999643
No 56
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=7.5e-24 Score=142.86 Aligned_cols=144 Identities=15% Similarity=0.149 Sum_probs=115.7
Q ss_pred ccccccEEEEEEee--CCCeEEEEcCCCcEEEEEecCCcccc-----eeeeeeeeeeeccCcccceeceEEEEecCC--C
Q psy1859 10 SSLKFQTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPEMQ-----KMKYAFKCHRIKEDGIEKIYPVNAISFHQE--Y 80 (162)
Q Consensus 10 ~~~~~~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~ 80 (162)
..+...+.+++|+| ++++|++++.||.|++|+.+...... +....+.. |...|.+++|+|+ +
T Consensus 54 ~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~ 124 (351)
T 3f3f_A 54 RAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLND---------SKGSLYSVKFAPAHLG 124 (351)
T ss_dssp ECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECC---------CSSCEEEEEECCGGGC
T ss_pred ccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecc---------cCCceeEEEEcCCCCC
Confidence 34667899999999 69999999999999998876543111 22333333 3447999999999 9
Q ss_pred CEEEEecCCCeEEEEeCCCccc----------------------------------------------------------
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKR---------------------------------------------------------- 102 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~---------------------------------------------------------- 102 (162)
.++++++.|+.|++||+++++.
T Consensus 125 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 204 (351)
T 3f3f_A 125 LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL 204 (351)
T ss_dssp SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE
T ss_pred cEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce
Confidence 9999999999999999876532
Q ss_pred --eeeeeecccceeEE-EcCCC----CEEEEecCCCeEEEEeCCCc----------------------------------
Q psy1859 103 --LCQFHRYDTGITSL-FHQEY----NTFATGGSDGYVNIWDGFNK---------------------------------- 141 (162)
Q Consensus 103 --~~~~~~~~~~v~~~-~~~~~----~~l~~~~~d~~i~iwd~~~~---------------------------------- 141 (162)
+..+..|...+.++ |+|++ ++|++++.|+.|++||++++
T Consensus 205 ~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (351)
T 3f3f_A 205 HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNT 284 (351)
T ss_dssp EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------
T ss_pred eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccc
Confidence 22334577889999 99998 89999999999999999864
Q ss_pred ------------eeeeeeccCCCceeEEEecCC
Q psy1859 142 ------------KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 142 ------------~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.+..+.+|...|++++|+||
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 285 EEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp ------CCSEEEEEEEEECTTSSCEEEEEECSS
T ss_pred ceeeeecccccccEEEEEecccccEEEEEEcCC
Confidence 567777889999999999986
No 57
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.9e-24 Score=146.85 Aligned_cols=140 Identities=8% Similarity=0.048 Sum_probs=108.9
Q ss_pred ccccccEEEEEEee--CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 10 SSLKFQTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
......+.+++++| +++++++++.||.+++|++.... .......+ |...+.+++|+|++.+|++|+
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~----~~~~~~~~--------~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS----QYIVHSAK--------SDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC----EEEEECCC--------SSCCCCEEEECTTSCEEEEEC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc----EEEEEecC--------CCCceEEEEECCCCCEEEEEc
Confidence 34447799999999 99999999999999997765433 22222122 223699999999999999999
Q ss_pred CCCeEEEEeCCCccce-eeeee-cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc---CCCcee--EEEe
Q psy1859 88 SDGYVNIWDGFNKKRL-CQFHR-YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR---YDTGIT--SLCF 159 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~-~~~~~-~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~--~v~~ 159 (162)
.|+.|++||+++++.+ ..+.. |...|.++ |+|++.+|++++.+ .|++||+++++.+..+.. |...+. +++|
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI 268 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEE
T ss_pred CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEE
Confidence 9999999999998877 77777 89999999 99999999999954 999999998876655543 334444 5999
Q ss_pred cCC
Q psy1859 160 SYD 162 (162)
Q Consensus 160 ~pd 162 (162)
+|+
T Consensus 269 ~~~ 271 (343)
T 3lrv_A 269 DDS 271 (343)
T ss_dssp CTT
T ss_pred CCC
Confidence 986
No 58
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=5.6e-24 Score=156.29 Aligned_cols=141 Identities=13% Similarity=0.141 Sum_probs=117.7
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
...+...+.+++|+|++++|++|+.||.|+||++.. ......+.+|.. .|.+++|+|++++|++++.
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~----~~~~~~~~~h~~---------~v~~~~~s~~~~~l~s~s~ 492 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA----GVSTRRFVGHTK---------DVLSVAFSLDNRQIVSASR 492 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCSS---------CEEEEEECTTSSCEEEEET
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC----CcceeEEeCCCC---------CEEEEEEeCCCCEEEEEeC
Confidence 344567789999999999999999999999966543 334444555544 7999999999999999999
Q ss_pred CCeEEEEeCCCccceee---eeecccceeEE-EcCCC--CEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQ---FHRYDTGITSL-FHQEY--NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~---~~~~~~~v~~~-~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+.|++||......... ...|...+.++ |+|++ ..+++++.|+.|++||+++++....+.+|.+.|++++|+||
T Consensus 493 D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 572 (694)
T 3dm0_A 493 DRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD 572 (694)
T ss_dssp TSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred CCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCC
Confidence 99999999875433222 23577889999 99986 58999999999999999999999999999999999999986
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.1e-23 Score=145.82 Aligned_cols=138 Identities=13% Similarity=0.193 Sum_probs=118.8
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
......+.+++|+|++++|++++.||.+++|+.+. .+....+..|. ..|.+++|+ +..+++++.|
T Consensus 131 ~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~---------~~v~~~~~~--~~~l~~~~~d 195 (401)
T 4aez_A 131 TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES----QTKLRTMAGHQ---------ARVGCLSWN--RHVLSSGSRS 195 (401)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT----CCEEEEECCCS---------SCEEEEEEE--TTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC----CeEEEEecCCC---------CceEEEEEC--CCEEEEEcCC
Confidence 33567899999999999999999999999966543 33444444444 379999994 5799999999
Q ss_pred CeEEEEeCCC-ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFN-KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|++||++. ...+..+..|...+.++ |+|++.++++++.|+.|++||+++++.+..+..|...|.+++|+|+
T Consensus 196 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~ 270 (401)
T 4aez_A 196 GAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPW 270 (401)
T ss_dssp SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTT
T ss_pred CCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCC
Confidence 9999999994 56677888899999999 9999999999999999999999999999889899999999999985
No 60
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=1e-24 Score=146.88 Aligned_cols=141 Identities=13% Similarity=0.163 Sum_probs=113.3
Q ss_pred cccccEEEEEEee--CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEEe
Q psy1859 11 SLKFQTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFATG 86 (162)
Q Consensus 11 ~~~~~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~ 86 (162)
.+.+.+.+++|+| ++++|++|+.|++|++|+..... ......+.+|. ..|.+++|+|+ +.+|+++
T Consensus 55 gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~--~~~~~~~~~h~---------~~V~~v~~~p~~~g~~lasg 123 (316)
T 3bg1_A 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT--WEKSHEHAGHD---------SSVNSVCWAPHDYGLILACG 123 (316)
T ss_dssp CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC--CCEEEEECCCS---------SCCCEEEECCTTTCSCEEEE
T ss_pred CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc--ceEEEEccCCC---------CceEEEEECCCCCCcEEEEE
Confidence 4567789999986 48999999999999997654322 23344444444 47999999998 7899999
Q ss_pred cCCCeEEEEeCCCccc---eeeeeecccceeEE-EcCC-----------------CCEEEEecCCCeEEEEeCCCc---e
Q psy1859 87 GSDGYVNIWDGFNKKR---LCQFHRYDTGITSL-FHQE-----------------YNTFATGGSDGYVNIWDGFNK---K 142 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~---~~~~~~~~~~v~~~-~~~~-----------------~~~l~~~~~d~~i~iwd~~~~---~ 142 (162)
+.|+.|++||++.+.. ...+..|...+.++ |+|+ +++|++++.|+.|++||++.+ +
T Consensus 124 s~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~ 203 (316)
T 3bg1_A 124 SSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK 203 (316)
T ss_dssp CSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE
T ss_pred cCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc
Confidence 9999999999987532 34556778888888 9997 478999999999999999754 4
Q ss_pred eeeeeccCCCceeEEEecCC
Q psy1859 143 RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 143 ~~~~~~~~~~~v~~v~~~pd 162 (162)
.+..+.+|...|.+++|+|+
T Consensus 204 ~~~~l~~h~~~V~~v~~sp~ 223 (316)
T 3bg1_A 204 EEQKLEAHSDWVRDVAWAPS 223 (316)
T ss_dssp EEECCBCCSSCEEEEECCCC
T ss_pred eeeecccCCCceEEEEecCC
Confidence 67778899999999999985
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=1e-23 Score=144.89 Aligned_cols=138 Identities=17% Similarity=0.191 Sum_probs=115.9
Q ss_pred cccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 11 SLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 11 ~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
.+...+.+++|+| ++++|++++.|+.|++|+.... ....+..+.. |...|.+++|+|++++|++++.|
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d 184 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS-----VIQVFAKTDS------WDYWYCCVDVSVSRQMLATGDST 184 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC-----EEEEEECCCC------SSCCEEEEEEETTTTEEEEEETT
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC-----ceEEEeccCC------CCCCeEEEEECCCCCEEEEECCC
Confidence 4678899999999 7899999999999999776632 2222222221 33479999999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCC----ceeeeeeccCCCceeEEEecC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFN----KKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~v~~~p 161 (162)
+.|++||+ +++.+..+..|...+.++ |+|+++ ++++++.|+.|++||+++ +..+..+ .|...|++++|+|
T Consensus 185 ~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~ 260 (383)
T 3ei3_B 185 GRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNP 260 (383)
T ss_dssp SEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECT
T ss_pred CCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcC
Confidence 99999999 477888888999999999 999999 999999999999999987 5566666 6999999999998
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.8e-23 Score=141.90 Aligned_cols=142 Identities=15% Similarity=0.161 Sum_probs=117.6
Q ss_pred ccccccEEEEEEeeC--CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEE
Q psy1859 10 SSLKFQTRCIKCFPN--KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFAT 85 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~--~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~ 85 (162)
..+...+.+++|+++ +++|++++.||.|++|+.+... ......+..|. ..|.+++|+|+ +.+|++
T Consensus 52 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~---------~~v~~~~~~~~~~~~~l~~ 120 (379)
T 3jrp_A 52 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR--WSQIAVHAVHS---------ASVNSVQWAPHEYGPLLLV 120 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE--EEEEEEECCCS---------SCEEEEEECCGGGCSEEEE
T ss_pred cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc--eeEeeeecCCC---------cceEEEEeCCCCCCCEEEE
Confidence 345678899999977 8999999999999998776533 33444444443 37999999999 899999
Q ss_pred ecCCCeEEEEeCCCcc--ceeeeeecccceeEE-EcC-------------CCCEEEEecCCCeEEEEeCCCce----eee
Q psy1859 86 GGSDGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQ-------------EYNTFATGGSDGYVNIWDGFNKK----RLC 145 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~-------------~~~~l~~~~~d~~i~iwd~~~~~----~~~ 145 (162)
++.|+.|++||++... ....+..|...+.++ |+| ++.++++++.|+.|++||++++. .+.
T Consensus 121 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 200 (379)
T 3jrp_A 121 ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 200 (379)
T ss_dssp EETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred ecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE
Confidence 9999999999999874 344566788899999 999 69999999999999999997653 456
Q ss_pred eeccCCCceeEEEecCC
Q psy1859 146 QFHRYDTGITSLCFSYD 162 (162)
Q Consensus 146 ~~~~~~~~v~~v~~~pd 162 (162)
.+..|...|.+++|+||
T Consensus 201 ~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 201 TLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp EECCCSSCEEEEEECCC
T ss_pred EEecccCcEeEEEECCC
Confidence 67789999999999986
No 63
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=8.4e-24 Score=159.13 Aligned_cols=138 Identities=9% Similarity=0.043 Sum_probs=114.6
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
...+...+.+++|+|++++|++|+.||.|+||+.+ . ......+. |...|.+++|+| +++|++++.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~--~--~~~~~~~~----------~~~~V~~l~fsp-g~~L~S~s~ 77 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQ--Q--VEVVIKLE----------DRSAIKEMRFVK-GIYLVVINA 77 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECST--T--CEEEEECS----------SCCCEEEEEEET-TTEEEEEET
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCC--C--cEEEEEcC----------CCCCEEEEEEcC-CCEEEEEEC
Confidence 34567889999999999999999999999996543 2 22222211 334799999999 889999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceee-----------eeeccCCCceeE
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRL-----------CQFHRYDTGITS 156 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~v~~ 156 (162)
|+.|++||+++++.+..+. +...++++ |+|+++++++|+.||.|++||+++++.. ..+.+|.+.|++
T Consensus 78 D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~s 156 (902)
T 2oaj_A 78 KDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVS 156 (902)
T ss_dssp TCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCE
T ss_pred cCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEE
Confidence 9999999999998888775 66789999 9999999999999999999999988753 234678899999
Q ss_pred EEecCC
Q psy1859 157 LCFSYD 162 (162)
Q Consensus 157 v~~~pd 162 (162)
++|+|+
T Consensus 157 l~~sp~ 162 (902)
T 2oaj_A 157 IQWNPR 162 (902)
T ss_dssp EEEETT
T ss_pred EEEccC
Confidence 999984
No 64
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=1.9e-23 Score=145.98 Aligned_cols=143 Identities=21% Similarity=0.276 Sum_probs=116.9
Q ss_pred cccccEEEEEEeeCCC-eEEEEcCCCcEEEEEecCCccccee---eeeeeeeeeccCcccceeceEEEEecC-CCCEEEE
Q psy1859 11 SLKFQTRCIKCFPNKQ-GYVLSSIEGRAAVEYLDTGPEMQKM---KYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFAT 85 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~-~l~~~~~~g~i~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~ 85 (162)
.+...+.+++|+|++. +|++++.||.|++|++......... ...+.. |...|.+++|+| ++.+|++
T Consensus 179 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---------h~~~v~~v~~~p~~~~~l~s 249 (430)
T 2xyi_A 179 GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG---------HTAVVEDVAWHLLHESLFGS 249 (430)
T ss_dssp CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC---------CSSCEEEEEECSSCTTEEEE
T ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC---------CCCCEeeeEEeCCCCCEEEE
Confidence 3456678999999988 9999999999999877653211111 122222 445799999999 5689999
Q ss_pred ecCCCeEEEEeCCCc---cceeeeeecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCC-ceeeeeeccCCCceeEEEe
Q psy1859 86 GGSDGYVNIWDGFNK---KRLCQFHRYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFN-KKRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~---~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~v~~ 159 (162)
++.|+.|++||++++ +.+..+..|...+.++ |+|++. ++++++.|+.|++||+++ +..+..+..|...|++++|
T Consensus 250 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 250 VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 329 (430)
T ss_dssp EETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE
T ss_pred EeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE
Confidence 999999999999986 5677777899999999 999887 688999999999999997 5668888889999999999
Q ss_pred cCC
Q psy1859 160 SYD 162 (162)
Q Consensus 160 ~pd 162 (162)
+|+
T Consensus 330 sp~ 332 (430)
T 2xyi_A 330 SPH 332 (430)
T ss_dssp CSS
T ss_pred CCC
Confidence 985
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=2.4e-23 Score=142.16 Aligned_cols=142 Identities=15% Similarity=0.139 Sum_probs=116.7
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+...+.+++|+|++++|++++.||.+++|+++... ......+..+ ...|.+++|+|++++|++++.|
T Consensus 49 ~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d 117 (372)
T 1k8k_C 49 KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT--WKPTLVILRI---------NRAARCVRWAPNEKKFAVGSGS 117 (372)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE--EEEEEECCCC---------SSCEEEEEECTTSSEEEEEETT
T ss_pred cCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe--eeeeEEeecC---------CCceeEEEECCCCCEEEEEeCC
Confidence 3456788999999999999999999999998775433 2223222333 3479999999999999999999
Q ss_pred CeEEEEeCCCccc---eeee-eecccceeEE-EcCCCCEEEEecCCCeEEEEeCC------------------Cceeeee
Q psy1859 90 GYVNIWDGFNKKR---LCQF-HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF------------------NKKRLCQ 146 (162)
Q Consensus 90 ~~v~~wd~~~~~~---~~~~-~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~------------------~~~~~~~ 146 (162)
+.|++||++.++. ...+ ..|...+.++ |+|+++++++++.|+.|++||++ .++.+..
T Consensus 118 ~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (372)
T 1k8k_C 118 RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE 197 (372)
T ss_dssp SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE
T ss_pred CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEe
Confidence 9999999988763 2222 4567889999 99999999999999999999953 6778888
Q ss_pred eccCCCceeEEEecCC
Q psy1859 147 FHRYDTGITSLCFSYD 162 (162)
Q Consensus 147 ~~~~~~~v~~v~~~pd 162 (162)
+..|...|.+++|+||
T Consensus 198 ~~~~~~~v~~~~~~~~ 213 (372)
T 1k8k_C 198 SSSSCGWVHGVCFSAN 213 (372)
T ss_dssp CCCCSSCEEEEEECSS
T ss_pred cCCCCCeEEEEEECCC
Confidence 8899999999999986
No 66
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.4e-23 Score=140.38 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=114.5
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
...+...+.+++|+|++++|++++.||.|++|++.. .+....+..|.. .|.+++|+|++++|++++.
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~h~~---------~v~~~~~~~~~~~l~s~~~ 94 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN----GERLGTLDGHTG---------TIWSIDVDCFTKYCVTGSA 94 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT----CCEEEEECCCSS---------CEEEEEECTTSSEEEEEET
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC----chhhhhhhhcCC---------cEEEEEEcCCCCEEEEEeC
Confidence 455678899999999999999999999999976543 334444455443 7999999999999999999
Q ss_pred CCeEEEEeCCCccceeeeeeccc---------------------------------------------------------
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDT--------------------------------------------------------- 111 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~--------------------------------------------------------- 111 (162)
|+.|++||+.+++.+..+. +..
T Consensus 95 dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp TTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred CCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 9999999998765544332 111
Q ss_pred ---ceeEE-EcCCCCEEEEecCCCeEEEEeCCC-ceeeeeeccCCCceeEEEecCC
Q psy1859 112 ---GITSL-FHQEYNTFATGGSDGYVNIWDGFN-KKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 112 ---~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+.++ |+|+++++++++.|+.|++||+++ ++.+..+..|...|.+++|+||
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 229 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPD 229 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTT
T ss_pred CccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCC
Confidence 56677 888888999999999999999998 7888888899999999999986
No 67
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.92 E-value=1.8e-24 Score=151.33 Aligned_cols=140 Identities=18% Similarity=0.179 Sum_probs=112.1
Q ss_pred cccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 11 SLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 11 ~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
.+.+.|.+|+|+| ++++|++++.||+|++|++.... ..... ..+. +...+.+++|+|++.+|++|+.|
T Consensus 162 gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~--~~~~-------~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 162 GAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI--LRVFA--SSDT-------INIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp SSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE--EEEEE--CCSS-------CSCCCCCEEEETTTTEEEEECSS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc--eeEEe--ccCC-------CCccEEEEEECCCCCEEEEEeCC
Confidence 4567789999998 68899999999999997765322 21111 1111 22357899999999999999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCCceeeee---eccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFNKKRLCQ---FHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~v~~v~~~pd 162 (162)
|.|++||++ ++.+..+..|...|.++ |+|++. ++++++.|+.|++||+++.+.... ..+|...|++++|+||
T Consensus 231 g~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spd 307 (435)
T 4e54_B 231 GNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPD 307 (435)
T ss_dssp SBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTT
T ss_pred CcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCC
Confidence 999999986 45677888899999999 999876 788999999999999988764333 3578999999999986
No 68
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=3.9e-23 Score=140.60 Aligned_cols=141 Identities=16% Similarity=0.217 Sum_probs=115.6
Q ss_pred eeccccccEEEEEEeeC---CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE
Q psy1859 8 RESSLKFQTRCIKCFPN---KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA 84 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~---~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~ 84 (162)
....+...|.+++|+|+ +++|++++.||.|++|+++... ......+..|.. .|.+++|+|++++|+
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~---------~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG--QTIPKAQQMHTG---------PVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS--CEEEEEEEECSS---------CEEEEEECTTSSEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC--ceeEEEeccccC---------CEEEEEECcCCCEEE
Confidence 34556788999999998 5999999999999998876532 333344444443 799999999999999
Q ss_pred EecCCCeEEEEeCCCccceeeeeecccceeEE-E--cCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 85 TGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-F--HQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~--~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+++.|+.|++||+++++.+. +..|...+.++ | +|++.++++++.|+.|++||+++++.+..+..+. .+.++.+.+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~ 180 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY 180 (368)
T ss_dssp EEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET
T ss_pred EEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC
Confidence 99999999999999887665 45688999999 9 8999999999999999999999998888887654 455555543
No 69
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.7e-24 Score=162.88 Aligned_cols=142 Identities=12% Similarity=0.068 Sum_probs=108.8
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+..++|+|+++.|++|+.|++|++|++..........+... .....+.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 438 v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~--l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lw 515 (902)
T 2oaj_A 438 KRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVN--LSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLF 515 (902)
T ss_dssp CCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEE--HHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEee--chhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEE
Confidence 34567889999999999999999977654321000111110 0000012356689999999999999999999999999
Q ss_pred eCCCcc---------------------------------------------ceeeeeecccceeEE-EcCCCCEEEEecC
Q psy1859 96 DGFNKK---------------------------------------------RLCQFHRYDTGITSL-FHQEYNTFATGGS 129 (162)
Q Consensus 96 d~~~~~---------------------------------------------~~~~~~~~~~~v~~~-~~~~~~~l~~~~~ 129 (162)
|+.+++ ++..+..|.+.|+++ |+|+| +|++|+.
T Consensus 516 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~ 594 (902)
T 2oaj_A 516 KYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYA 594 (902)
T ss_dssp EEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEET
T ss_pred EecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeC
Confidence 997652 255667799999999 99999 9999999
Q ss_pred CCeEEEEeCCCceeee-----eec-cCCCceeEEEec
Q psy1859 130 DGYVNIWDGFNKKRLC-----QFH-RYDTGITSLCFS 160 (162)
Q Consensus 130 d~~i~iwd~~~~~~~~-----~~~-~~~~~v~~v~~~ 160 (162)
|++|++||++++..+. .+. +|.+.|++|+|+
T Consensus 595 D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs 631 (902)
T 2oaj_A 595 AGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFV 631 (902)
T ss_dssp TSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEE
T ss_pred CCcEEEEECCCCeEEEEeehhHhccccccceEEEEEE
Confidence 9999999998876653 333 788999999999
No 70
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=9.5e-24 Score=146.11 Aligned_cols=143 Identities=18% Similarity=0.246 Sum_probs=118.0
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC-CCEEEEecCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE-YNTFATGGSD 89 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~d 89 (162)
.+...+.+++|+|++++|++++.||.+++|+++...........+..|. ..|.+++|+|+ +.+|++++.|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~~l~s~~~d 135 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHS---------SSVKTVKFNAKQDNVLASGGNN 135 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSS---------SCCCEEEECSSSTTBEEEECSS
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCc---------cceEEEEEcCCCCCEEEEEcCC
Confidence 3567799999999999999999999999987765221122344444443 47999999998 7999999999
Q ss_pred CeEEEEeCCCcc------ceee---eeecccceeEE-EcCC-CCEEEEecCCCeEEEEeCCCceeeeeeccC------CC
Q psy1859 90 GYVNIWDGFNKK------RLCQ---FHRYDTGITSL-FHQE-YNTFATGGSDGYVNIWDGFNKKRLCQFHRY------DT 152 (162)
Q Consensus 90 ~~v~~wd~~~~~------~~~~---~~~~~~~v~~~-~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------~~ 152 (162)
+.|++||+++++ .... ...|...+.++ |+|+ +.++++++.|+.|++||+++++.+..+..+ ..
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQ 215 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCC
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCC
Confidence 999999999876 3322 35688899999 9998 789999999999999999999988888766 78
Q ss_pred ceeEEEecCC
Q psy1859 153 GITSLCFSYD 162 (162)
Q Consensus 153 ~v~~v~~~pd 162 (162)
.|.+++|+|+
T Consensus 216 ~v~~~~~~~~ 225 (416)
T 2pm9_A 216 QLSVVEWHPK 225 (416)
T ss_dssp CEEEEEECSS
T ss_pred ceEEEEECCC
Confidence 8999999986
No 71
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.7e-23 Score=146.84 Aligned_cols=140 Identities=13% Similarity=0.000 Sum_probs=116.3
Q ss_pred ccccEEEEEEeeCCCeE-EEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 12 LKFQTRCIKCFPNKQGY-VLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l-~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
+.+.+.+++|+|++++| ++++.||.|+||+++... ......+..+. |...|.+++|+|++++|++++.++
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~-------~~~~v~~~~~sp~~~~l~~~~~~g 171 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS--KNVLKLRKRFC-------FSKRPNAISIAEDDTTVIIADKFG 171 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS--SSCEEEEEEEE-------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC--Cceeeeeeccc-------CCCCceEEEEcCCCCEEEEEeCCC
Confidence 34468999999999996 888999999998876323 23333333332 233799999999999999999999
Q ss_pred eEEEEeCCCcccee----eeeecccceeEE-EcCC---CCEEEEecCCCeEEEEeCCCceeeee-eccCCCceeEEEec
Q psy1859 91 YVNIWDGFNKKRLC----QFHRYDTGITSL-FHQE---YNTFATGGSDGYVNIWDGFNKKRLCQ-FHRYDTGITSLCFS 160 (162)
Q Consensus 91 ~v~~wd~~~~~~~~----~~~~~~~~v~~~-~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~v~~~ 160 (162)
.+++|++.+++... .+..|...+.++ |+|+ +++|++++.|+.|++||+++++.+.. +.+|...|.+++|+
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s 250 (450)
T 2vdu_B 172 DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG 250 (450)
T ss_dssp EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC
T ss_pred cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC
Confidence 99999998876544 777899999999 9999 99999999999999999999888777 55899999999997
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.92 E-value=1.1e-23 Score=147.16 Aligned_cols=150 Identities=13% Similarity=0.176 Sum_probs=112.0
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcc-------cceeeeeeeeeeec---cCcccceeceEEEEecCCC-
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPE-------MQKMKYAFKCHRIK---EDGIEKIYPVNAISFHQEY- 80 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~-------~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~p~~- 80 (162)
..+.|.+++|+|++++|++|+.||.|+||+++.... .......+.+|... .....+...|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 457899999999999999999999999988764320 11123344444300 0000001479999999998
Q ss_pred -CEEEEecCCCeEEEEeCCCccce---------------------------------------ee-eeecccceeEE-Ec
Q psy1859 81 -NTFATGGSDGYVNIWDGFNKKRL---------------------------------------CQ-FHRYDTGITSL-FH 118 (162)
Q Consensus 81 -~~l~~~~~d~~v~~wd~~~~~~~---------------------------------------~~-~~~~~~~v~~~-~~ 118 (162)
..|++++.|+.|++||+..++.. .. ...|...|.++ |+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999999764331 11 24688899999 99
Q ss_pred CCCCEEEEecCCCeEEEEeCCC-ceeee-------eeccCCCceeEEEecCC
Q psy1859 119 QEYNTFATGGSDGYVNIWDGFN-KKRLC-------QFHRYDTGITSLCFSYD 162 (162)
Q Consensus 119 ~~~~~l~~~~~d~~i~iwd~~~-~~~~~-------~~~~~~~~v~~v~~~pd 162 (162)
|++++|+++ .|+.|++||+++ ++.+. .+..|...|++++|+|+
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 237 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPN 237 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSS
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCC
Confidence 999999999 799999999984 44444 35689999999999986
No 73
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.2e-23 Score=144.23 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=120.3
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.....+.+++|+|++++|++++.|+.+++|+... .+....+..|. ..|.+++|+|++ .+++++.|+
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~---------~~i~~~~~~~~~-~l~~~~~d~ 310 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN----GNSQNCFYGHS---------QSIVSASWVGDD-KVISCSMDG 310 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS----BSCSEEECCCS---------SCEEEEEEETTT-EEEEEETTS
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC----CccceEecCCC---------ccEEEEEECCCC-EEEEEeCCC
Confidence 4567789999999999999999999999965543 33333444443 379999999999 999999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce--------------------eeeeecc
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK--------------------RLCQFHR 149 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~--------------------~~~~~~~ 149 (162)
.|++||+++++.+..+..+...+.++ |+|+++++++++.|+.|++||+++++ .+..+..
T Consensus 311 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS 390 (425)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECC
T ss_pred cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC
Confidence 99999999999999998889999999 99999999999999999999999887 7888888
Q ss_pred CCC--ceeEEEecCC
Q psy1859 150 YDT--GITSLCFSYD 162 (162)
Q Consensus 150 ~~~--~v~~v~~~pd 162 (162)
|.. .|++++|+||
T Consensus 391 ~~~~~~v~~~~~s~~ 405 (425)
T 1r5m_A 391 SQDNDYIFDLSWNCA 405 (425)
T ss_dssp TTCCCCEEEEEECTT
T ss_pred cccCCceEEEEccCC
Confidence 876 9999999986
No 74
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=6.8e-24 Score=144.36 Aligned_cols=137 Identities=11% Similarity=0.112 Sum_probs=114.6
Q ss_pred ccccEEEEEEeeC----CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEEe
Q psy1859 12 LKFQTRCIKCFPN----KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATG 86 (162)
Q Consensus 12 ~~~~~~~i~~~~~----~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~ 86 (162)
....+.+++|+|+ +++|++++.||.|++|+.+. .+....+.+|. ..|.+++|+| ++.+|+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~----~~~~~~~~~~~---------~~i~~~~~~~~~~~~l~s~ 134 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT----MQCIKHYVGHG---------NAINELKFHPRDPNLLLSV 134 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT----CCEEEEEESCC---------SCEEEEEECSSCTTEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh----ceEeeeecCCC---------CcEEEEEECCCCCCEEEEE
Confidence 3466899999998 67899999999999965543 33444445444 3799999999 88999999
Q ss_pred cCCCeEEEEeCCCccceeee---eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc-------------
Q psy1859 87 GSDGYVNIWDGFNKKRLCQF---HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR------------- 149 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~---~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------------- 149 (162)
+.|+.|++||+++++.+..+ ..|...+.++ |+|+++++++++.|+.|++||+++++.+..+..
T Consensus 135 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (366)
T 3k26_A 135 SKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPF 214 (366)
T ss_dssp ETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCC
T ss_pred eCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccc
Confidence 99999999999998888877 6788999999 999999999999999999999998765544433
Q ss_pred ---------------CCCceeEEEecC
Q psy1859 150 ---------------YDTGITSLCFSY 161 (162)
Q Consensus 150 ---------------~~~~v~~v~~~p 161 (162)
|...|.+++|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~~~~~ 241 (366)
T 3k26_A 215 ISQKIHFPDFSTRDIHRNYVDCVRWLG 241 (366)
T ss_dssp CCEEECCCSEEECSSCSSCCCEEEEET
T ss_pred cceeeccCccccccCCcceEEEEEEcC
Confidence 888999999874
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=4.3e-23 Score=143.15 Aligned_cols=131 Identities=12% Similarity=0.209 Sum_probs=110.1
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEe
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWD 96 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd 96 (162)
....++|++++|++++.||.|++|+.+. ......+.. |...|.+++|+|++++|++++.|+.|++||
T Consensus 101 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~---------h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd 167 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGTTEGDIKVLDSNF----NLQREIDQA---------HVSEITKLKFFPSGEALISSSQDMQLKIWS 167 (420)
T ss_dssp EEEEECSSSCEEEEEETTSCEEEECTTS----CEEEEETTS---------SSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEEEecCCCEEEEEECCCCEEEEeCCC----cceeeeccc---------ccCccEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 4456889999999999999999966543 233333333 444899999999999999999999999999
Q ss_pred CCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc---CCCceeEEEec
Q psy1859 97 GFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR---YDTGITSLCFS 160 (162)
Q Consensus 97 ~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~v~~~ 160 (162)
+++++.+..+..|...+.++ |+|++++|++++.|+.|++||+++++.+..+.. +...|.+++|.
T Consensus 168 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 168 VKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp TTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred CCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 99999999999999999999 999999999999999999999999998888864 44566666664
No 76
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.2e-23 Score=155.90 Aligned_cols=143 Identities=13% Similarity=0.103 Sum_probs=119.8
Q ss_pred eeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEE
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFAT 85 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~ 85 (162)
....+.+.|.+++|+|+++++++|+.||.|+||+.+..+ ......+.+|. .+|.+++|+|+ +++|++
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~--~~~~~~l~~h~---------~~V~~l~~s~~~~~~~l~s 72 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHE---------GPVWRVDWAHPKFGTILAS 72 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE--EEEEEEECCCS---------SCEEEEEECCTTSCSEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC--CccceeccCCc---------CceEEEEecCCCCCCEEEE
Confidence 345677889999999999999999999999998876433 44455555554 37999999988 899999
Q ss_pred ecCCCeEEEEeCCCcc--ceeeeeecccceeEE-EcCC--CCEEEEecCCCeEEEEeCCCce--eeeeeccCCCceeEEE
Q psy1859 86 GGSDGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQE--YNTFATGGSDGYVNIWDGFNKK--RLCQFHRYDTGITSLC 158 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~v~ 158 (162)
++.||.|++||+.+++ .+..+..|...+.++ |+|+ +.++++++.||.|++||++++. ....+..|...|.+++
T Consensus 73 ~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~ 152 (753)
T 3jro_A 73 CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 152 (753)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEE
T ss_pred EeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEE
Confidence 9999999999999876 667777899999999 9998 9999999999999999998773 3445678999999999
Q ss_pred ecC
Q psy1859 159 FSY 161 (162)
Q Consensus 159 ~~p 161 (162)
|+|
T Consensus 153 ~~p 155 (753)
T 3jro_A 153 WAP 155 (753)
T ss_dssp ECC
T ss_pred ecC
Confidence 998
No 77
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.4e-23 Score=143.51 Aligned_cols=150 Identities=17% Similarity=0.181 Sum_probs=118.4
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccC---cccceeceEEEE--ecCCCCEEEE
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKED---GIEKIYPVNAIS--FHQEYNTFAT 85 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~--~~p~~~~l~~ 85 (162)
.+...+.+++|+|++++|++++.||.|++|+++.... .+....+..+..... ..++...+.++. ++|++.++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQ-ESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEE-TTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccC-CceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 4677899999999999999999999999988753210 122222222211100 000334566776 5688999999
Q ss_pred ecCCCeEEEEeCCCccceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec-cCCCceeEEEecC
Q psy1859 86 GGSDGYVNIWDGFNKKRLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSLCFSY 161 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p 161 (162)
++.|+.|++||+++++.+..+.. |...++++ |+|++++|++++.|+.|++||+++++++..+. .|...|.+++|+|
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 99999999999999999998887 88999999 99999999999999999999999999988876 7788999997776
No 78
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=1.2e-22 Score=139.93 Aligned_cols=153 Identities=13% Similarity=0.136 Sum_probs=121.2
Q ss_pred eeeccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeee--eeccCcccceeceEEEEecC-CCCE
Q psy1859 7 RRESSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCH--RIKEDGIEKIYPVNAISFHQ-EYNT 82 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~p-~~~~ 82 (162)
.....+.+.+.+++|+| ++++|++++.||.|++|+.+... .......... ........|...|.+++|+| ++.+
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSS--RQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCS--SSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCc--ccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 34445778999999999 99999999999999998776543 2222211110 00111223666899999999 6689
Q ss_pred EEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcC---CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEE
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ---EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLC 158 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~ 158 (162)
|++++.|+.|++||+.+++....+. +...+..+ ++| ++.++++++.|+.|++||+++++.+..+..|...|.+++
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 9999999999999999988777765 56777788 777 555999999999999999999999999999999999999
Q ss_pred ecCC
Q psy1859 159 FSYD 162 (162)
Q Consensus 159 ~~pd 162 (162)
|+|+
T Consensus 194 ~~~~ 197 (408)
T 4a11_B 194 WSPR 197 (408)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 9986
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.5e-23 Score=136.14 Aligned_cols=136 Identities=13% Similarity=0.118 Sum_probs=117.4
Q ss_pred cccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 11 SLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 11 ~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
.....+.+++++| +++.+++++.||.+++|+ . ......+... |...+.+++|+|++. +++++.|
T Consensus 140 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~----~~~~~~~~~~--------~~~~i~~~~~~~~~~-~~~~~~d 204 (313)
T 3odt_A 140 AHNASVWDAKVVSFSENKFLTASADKTIKLWQ--N----DKVIKTFSGI--------HNDVVRHLAVVDDGH-FISCSND 204 (313)
T ss_dssp CCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--T----TEEEEEECSS--------CSSCEEEEEEEETTE-EEEEETT
T ss_pred cCCCceeEEEEccCCCCEEEEEECCCCEEEEe--c----CceEEEEecc--------CcccEEEEEEcCCCe-EEEccCC
Confidence 4567788999998 899999999999999965 2 2233333331 223799999999988 8999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|++||+++++.+..+..|...+.++ |+|++ .+++++.|+.|++||+++++.+..+..|...|.+++|+||
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 277 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN 277 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT
T ss_pred CeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccC
Confidence 999999999999999999999999999 99999 6889999999999999999999999999999999999986
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=1.8e-23 Score=144.67 Aligned_cols=139 Identities=18% Similarity=0.196 Sum_probs=112.7
Q ss_pred cEEEEEEeeCCCeEE-EEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEEecCCCeE
Q psy1859 15 QTRCIKCFPNKQGYV-LSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATGGSDGYV 92 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~-~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~v 92 (162)
....++++|+...++ +++.+|.|+||+++...........+.+ |...|.+++|+| ++.+|++++.|+.|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~---------h~~~V~~~~~~p~~~~~l~s~s~dg~v 106 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCG---------HTAPVLDIAWCPHNDNVIASGSEDCTV 106 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCC---------CSSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEec---------CCCCEEEEEeCCCCCCEEEEEeCCCeE
Confidence 334577888765444 4688999999877543211122223334 444899999999 88999999999999
Q ss_pred EEEeCCCc-------cceeeeeecccceeEE-EcCCC-CEEEEecCCCeEEEEeCCCceeeeee--ccCCCceeEEEecC
Q psy1859 93 NIWDGFNK-------KRLCQFHRYDTGITSL-FHQEY-NTFATGGSDGYVNIWDGFNKKRLCQF--HRYDTGITSLCFSY 161 (162)
Q Consensus 93 ~~wd~~~~-------~~~~~~~~~~~~v~~~-~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p 161 (162)
++||+.++ +++..+..|...+.++ |+|++ .++++++.|+.|++||+++++.+..+ ..|...|.+++|+|
T Consensus 107 ~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 186 (402)
T 2aq5_A 107 MVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR 186 (402)
T ss_dssp EEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT
T ss_pred EEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC
Confidence 99999987 5677888899999999 99998 69999999999999999999999888 78999999999998
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
|
T Consensus 187 ~ 187 (402)
T 2aq5_A 187 D 187 (402)
T ss_dssp T
T ss_pred C
Confidence 6
No 81
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=2e-23 Score=146.12 Aligned_cols=144 Identities=13% Similarity=0.023 Sum_probs=110.0
Q ss_pred ccccEEEEEEeeCCCeEE----EEcCCCcEEEEEecCCcc---cc-eeeeeeeeeeeccCcccceeceEEEEecCC-CCE
Q psy1859 12 LKFQTRCIKCFPNKQGYV----LSSIEGRAAVEYLDTGPE---MQ-KMKYAFKCHRIKEDGIEKIYPVNAISFHQE-YNT 82 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~----~~~~~g~i~i~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~ 82 (162)
+...+.+++|+|++++|+ +++.|+.|+||+.+.... .. +....+.. ..+|...|.+++|+|+ +.+
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~------~~~h~~~V~~v~~~p~~~~~ 164 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKL------LKDAGGMVIDMKWNPTVPSM 164 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEEC------CCSGGGSEEEEEECSSCTTE
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeec------cCCCCCceEEEEECCCCCCE
Confidence 445689999999999999 788899999987653200 00 11111111 1125558999999998 689
Q ss_pred EEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-------CCce
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY-------DTGI 154 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~v 154 (162)
|++++.|+.|++||++++..+.....|...+.++ |+|+|++|++|+.|+.|++||++ ++....+..| ...|
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v 243 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV 243 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE
T ss_pred EEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeE
Confidence 9999999999999999886666666788899999 99999999999999999999998 5544444333 3378
Q ss_pred eEEEecCC
Q psy1859 155 TSLCFSYD 162 (162)
Q Consensus 155 ~~v~~~pd 162 (162)
.+++|+++
T Consensus 244 ~~v~w~~~ 251 (434)
T 2oit_A 244 LDVLWIGT 251 (434)
T ss_dssp EEEEEEET
T ss_pred EEEEEecC
Confidence 99999874
No 82
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.3e-23 Score=144.18 Aligned_cols=145 Identities=17% Similarity=0.179 Sum_probs=120.6
Q ss_pred cccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecC
Q psy1859 11 SLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~ 88 (162)
.....+.+++|+|+ +.++++++.||.|++|+.... +....+..+.. ..+|...+.+++|+|++ .++++++.
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK----KEVIHLSYTSP---NSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT----EEEEEECCCCC---SSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC----CcceEEecccc---ccccCCceEEEEECCCCCCEEEEEEC
Confidence 35667899999998 789999999999999666542 33333333311 11124479999999997 78999999
Q ss_pred CC---eEEEEeCCCc-cceeeee-ecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 89 DG---YVNIWDGFNK-KRLCQFH-RYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 89 d~---~v~~wd~~~~-~~~~~~~-~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
|+ .|++||++++ .++..+. .|...+.++ |+| ++++|++++.|+.|++||+++++.+..+..|...|.+++|+|
T Consensus 236 d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 236 SDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAP 315 (416)
T ss_dssp CSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECT
T ss_pred CCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECC
Confidence 98 9999999986 5677777 899999999 999 999999999999999999999999999999999999999998
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
|
T Consensus 316 ~ 316 (416)
T 2pm9_A 316 E 316 (416)
T ss_dssp T
T ss_pred C
Confidence 6
No 83
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2e-22 Score=139.46 Aligned_cols=148 Identities=16% Similarity=0.164 Sum_probs=123.0
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeec----------------------------
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIK---------------------------- 61 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~---------------------------- 61 (162)
..+...+.+++|+|++++|++++.|+.+++|++.... . ...+..+...
T Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (425)
T 1r5m_A 146 NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT--V--MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFV 221 (425)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE--E--EEEECCC---------------CCCBSCCEEEETTEEE
T ss_pred cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc--E--EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEE
Confidence 3456788999999999999999999999997765432 1 1111111100
Q ss_pred -------------------cCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCC
Q psy1859 62 -------------------EDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEY 121 (162)
Q Consensus 62 -------------------~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~ 121 (162)
.....|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...+.++ |+|++
T Consensus 222 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 301 (425)
T 1r5m_A 222 IPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD 301 (425)
T ss_dssp EECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT
T ss_pred EEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC
Confidence 0112467789999999999999999999999999999999888888899999999 99999
Q ss_pred CEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 122 NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 122 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
++++++.|+.|++||+++++.+..+..|...|.+++|+||
T Consensus 302 -~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 302 -KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQD 341 (425)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTT
T ss_pred -EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCC
Confidence 9999999999999999999999999999999999999986
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.91 E-value=7.1e-23 Score=142.93 Aligned_cols=143 Identities=13% Similarity=0.107 Sum_probs=111.0
Q ss_pred ccccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccc--eeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 10 SSLKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQ--KMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 10 ~~~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
..+.+.|.+++|+| ++++|++|+.||.|+||+.+...... .....+ . |...|.+++|+|++.+|+++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~---------h~~~v~~~~~~~~~~~l~s~ 129 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-D---------CSSTVTQITMIPNFDAFAVS 129 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-E---------CSSCEEEEEECTTSSEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-c---------CCCCEEEEEEeCCCCEEEEE
Confidence 44567899999999 99999999999999998775411001 111111 1 44489999999999999999
Q ss_pred cCCCeEEEEeCC---Cccceeeeee------------cccceeEE---EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 87 GSDGYVNIWDGF---NKKRLCQFHR------------YDTGITSL---FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 87 ~~d~~v~~wd~~---~~~~~~~~~~------------~~~~v~~~---~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
+.|+.|++||+. .++....+.. +...+.++ +++++.++++++.|+.|++||+++++.+..+.
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 209 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE 209 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc
Confidence 999999999995 4444333221 23345555 55789999999999999999999999999888
Q ss_pred c--CCCceeEEEecCC
Q psy1859 149 R--YDTGITSLCFSYD 162 (162)
Q Consensus 149 ~--~~~~v~~v~~~pd 162 (162)
. |...|++++|+|+
T Consensus 210 ~~~h~~~v~~~~~s~~ 225 (437)
T 3gre_A 210 NSPRHGAVSSICIDEE 225 (437)
T ss_dssp CCGGGCCEEEEEECTT
T ss_pred cCCCCCceEEEEECCC
Confidence 7 8899999999986
No 85
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.91 E-value=7.1e-23 Score=141.06 Aligned_cols=145 Identities=15% Similarity=0.161 Sum_probs=116.9
Q ss_pred cccEEEEEEe----eCCCe-EEEEcCCCcEEEEEecC------Cccccee---eeeeeeeeeccCcccceeceEEEEecC
Q psy1859 13 KFQTRCIKCF----PNKQG-YVLSSIEGRAAVEYLDT------GPEMQKM---KYAFKCHRIKEDGIEKIYPVNAISFHQ 78 (162)
Q Consensus 13 ~~~~~~i~~~----~~~~~-l~~~~~~g~i~i~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p 78 (162)
...+.+++|+ |++++ |++++.||.+++|+... .. ... ...+.+. ......|...|.+++|+|
T Consensus 121 ~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~ 196 (397)
T 1sq9_A 121 KHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL--TLNWSPTLELQGT--VESPMTPSQFATSVDISE 196 (397)
T ss_dssp GSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT--TTCCCCEEEEEEE--ECCSSSSCCCCCEEEECT
T ss_pred CCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc--eeeccCcceeeee--eccccCCCCCceEEEECC
Confidence 4779999999 99999 99999999999988775 22 111 0022210 000012445799999999
Q ss_pred CCCEEEEecCCCeEEEEeCCCccceeeeee---c---ccceeEE-EcCCCCEEEEecCC---CeEEEEeCCCceeeeeec
Q psy1859 79 EYNTFATGGSDGYVNIWDGFNKKRLCQFHR---Y---DTGITSL-FHQEYNTFATGGSD---GYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 79 ~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~---~---~~~v~~~-~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~ 148 (162)
++ ++++++.|+.|++||+++++.+..+.. | ...+.++ |+|++++|++++.| +.|++||+++++.+..+.
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec
Confidence 99 999999999999999999999988888 8 8999999 99999999999999 999999999999999998
Q ss_pred c-------------CCCceeEEEecCC
Q psy1859 149 R-------------YDTGITSLCFSYD 162 (162)
Q Consensus 149 ~-------------~~~~v~~v~~~pd 162 (162)
. |...|.+++|+||
T Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 276 VPTHSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp BC--------CCBSBSSCEEEEEECSS
T ss_pred cCcccccccccccccCCcEEEEEECCC
Confidence 8 9999999999986
No 86
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3e-23 Score=147.24 Aligned_cols=135 Identities=12% Similarity=0.053 Sum_probs=106.7
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
...|.+++|+|+|..+++++.||.++||+ ... ....+. |.... ....+.+++|||+|++|++|+.||.|
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd--~~~----~l~~l~-~~~~~----~~~sv~svafSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFK--DNK----MLTNLD-SKGNL----SSRTYHCFEWNPIESSIVVGNEDGEL 153 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEE--TTE----EEEECC-CSSCS----TTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEe--CCc----eeeecc-CCCcc----ccccEEEEEEcCCCCEEEEEcCCCEE
Confidence 67899999999999999999999999965 221 222233 32100 01149999999999999999999999
Q ss_pred EEEeCCCccc-------eeee----eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee---eeee-ccCCCceeE
Q psy1859 93 NIWDGFNKKR-------LCQF----HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR---LCQF-HRYDTGITS 156 (162)
Q Consensus 93 ~~wd~~~~~~-------~~~~----~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~-~~~~~~v~~ 156 (162)
++||+..++. +..+ .+|...|.++ |+|+| +++++.|+++++||+.+++. .+++ .+|...|.+
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 9999998753 4555 4566799999 99999 88888999999999987763 3456 478889999
Q ss_pred EEec
Q psy1859 157 LCFS 160 (162)
Q Consensus 157 v~~~ 160 (162)
++|+
T Consensus 232 vaFs 235 (588)
T 2j04_A 232 LKIV 235 (588)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 87
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.9e-23 Score=149.09 Aligned_cols=141 Identities=13% Similarity=0.058 Sum_probs=110.5
Q ss_pred ccccEEEEEEeeC------CCeEEEEcCCCcEEEEEecCCcccc-------eeeeeeeeeeeccCcccceeceEEEEecC
Q psy1859 12 LKFQTRCIKCFPN------KQGYVLSSIEGRAAVEYLDTGPEMQ-------KMKYAFKCHRIKEDGIEKIYPVNAISFHQ 78 (162)
Q Consensus 12 ~~~~~~~i~~~~~------~~~l~~~~~~g~i~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 78 (162)
..+.+.+++|+|+ +.+|++++.||+|+||+.+...... .....+.+ |...|.+++|+|
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~---------h~~~v~sv~~s~ 276 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL---------ADSLITTFDFLS 276 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC---------TTTCEEEEEESS
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc---------CCCCEEEEEecC
Confidence 3467899999996 5789999999999998775432100 01112233 445899999998
Q ss_pred CCCEEEEecCCCeEEEEeCCCcc-ceeeeeecccceeEE---EcCCC-CEEEEecCCCeEEEEeCCCceeeeeeccCCC-
Q psy1859 79 EYNTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGITSL---FHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDT- 152 (162)
Q Consensus 79 ~~~~l~~~~~d~~v~~wd~~~~~-~~~~~~~~~~~v~~~---~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~- 152 (162)
+ ..|++|+.||.|++||++++. +...+..|...|.++ |+|++ .+|++++.|++|+|||+++++++..+.+|..
T Consensus 277 ~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 277 P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 6 489999999999999999764 455678899999987 57787 8999999999999999999887777766653
Q ss_pred -ceeEEEecCC
Q psy1859 153 -GITSLCFSYD 162 (162)
Q Consensus 153 -~v~~v~~~pd 162 (162)
.|.+++|+||
T Consensus 356 ~~v~~v~fsp~ 366 (524)
T 2j04_B 356 SNLVPVVYCPQ 366 (524)
T ss_dssp CSCCCEEEETT
T ss_pred CcccceEeCCC
Confidence 5889999995
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.91 E-value=6.5e-23 Score=148.02 Aligned_cols=137 Identities=14% Similarity=0.068 Sum_probs=117.4
Q ss_pred ccccEEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
+...+.+++++ ++++++++. ++.+++|++.... ... ..+.. |...|.+++|+|++++|++++.|+
T Consensus 445 ~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~--~~~-~~~~~---------~~~~v~~~~~s~~g~~l~~~~~dg 510 (615)
T 1pgu_A 445 LNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLE--VSF-DLKTP---------LRAKPSYISISPSETYIAAGDVMG 510 (615)
T ss_dssp CSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEE--EEE-ECSSC---------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCCceEEEEc--CCEEEEeecCCCeEEEEECCCcc--ccc-cccCC---------ccCceEEEEECCCCCEEEEcCCCC
Confidence 45677888888 889999999 9999996654321 111 23333 344799999999999999999999
Q ss_pred eEEEEeCCCccceeeeee-cccceeEE-EcC----------CCCEEEEecCCCeEEEEeCCCc-eeeeeeccCCCceeEE
Q psy1859 91 YVNIWDGFNKKRLCQFHR-YDTGITSL-FHQ----------EYNTFATGGSDGYVNIWDGFNK-KRLCQFHRYDTGITSL 157 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~-~~~~v~~~-~~~----------~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v 157 (162)
.|++||+.+++.+..+.. |...++++ |+| ++++|++++.|+.|++||+.++ +.+..+.+|...|+++
T Consensus 511 ~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l 590 (615)
T 1pgu_A 511 KILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNL 590 (615)
T ss_dssp CEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEE
T ss_pred eEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEE
Confidence 999999999999888887 99999999 999 9999999999999999999987 7888889999999999
Q ss_pred EecCC
Q psy1859 158 CFSYD 162 (162)
Q Consensus 158 ~~~pd 162 (162)
+|+||
T Consensus 591 ~~s~~ 595 (615)
T 1pgu_A 591 LWETP 595 (615)
T ss_dssp EEEET
T ss_pred EEcCC
Confidence 99986
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.91 E-value=2.9e-23 Score=140.39 Aligned_cols=141 Identities=16% Similarity=0.082 Sum_probs=117.0
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCC-EEEEec
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN-TFATGG 87 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~~~ 87 (162)
...+...+.+++|+|++++|++++.|+.|++|+++..... .....+.. |...|.+++|+|+++ +|++++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~-~~~~~~~~---------~~~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN-VDLLQSLR---------YKHPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE-EEEEEEEE---------CSSCEEEEEEEESSSEEEEEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc-ccceeeee---------cCCceEEEEECCCCCcEEEEEc
Confidence 4467788999999999999999999999999887754311 11222223 334799999999999 999999
Q ss_pred CCCeEEEEeC-CCccceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEEEeCCC---------ceeeeeeccCCCce
Q psy1859 88 SDGYVNIWDG-FNKKRLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN---------KKRLCQFHRYDTGI 154 (162)
Q Consensus 88 ~d~~v~~wd~-~~~~~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~---------~~~~~~~~~~~~~v 154 (162)
.|+.|++||+ ..++. ..+.. |...+.++ |+| +.++++++.|+.|++||+++ ++++..+. |...|
T Consensus 77 ~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v 153 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKI 153 (342)
T ss_dssp TTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCE
T ss_pred CCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCce
Confidence 9999999999 76644 66677 89999999 999 99999999999999999987 77777766 88899
Q ss_pred eEEEecCC
Q psy1859 155 TSLCFSYD 162 (162)
Q Consensus 155 ~~v~~~pd 162 (162)
.+++|+|+
T Consensus 154 ~~~~~~~~ 161 (342)
T 1yfq_A 154 FTMDTNSS 161 (342)
T ss_dssp EEEEECSS
T ss_pred EEEEecCC
Confidence 99999985
No 90
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=8.7e-24 Score=149.95 Aligned_cols=147 Identities=7% Similarity=0.013 Sum_probs=108.1
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCc---ccceeeeee-------------e-eeeeccCcccceeceEE
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGP---EMQKMKYAF-------------K-CHRIKEDGIEKIYPVNA 73 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~---~~~~~~~~~-------------~-~~~~~~~~~~~~~~v~~ 73 (162)
.+..-+.+++|+|||+++++++.|++|+ +-.... +....++.. . +.........|...|.+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 3556788999999999999999999996 221110 000001110 0 00000011234668999
Q ss_pred EEecCCCCEEEEecCCCeEEEEeCCCccceeeeeeccc-----ceeEE-EcCCCCEEEEecCCCeEEEEeCCCce-----
Q psy1859 74 ISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDT-----GITSL-FHQEYNTFATGGSDGYVNIWDGFNKK----- 142 (162)
Q Consensus 74 ~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~-----~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~----- 142 (162)
++|||+|.+|++++.||.|++||... .+..+. |.. .+.++ |||||++|++|+.||+|++||+.+++
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 99999999999999999999999644 555555 554 48999 99999999999999999999998875
Q ss_pred --eeeee----ccCCCceeEEEecCC
Q psy1859 143 --RLCQF----HRYDTGITSLCFSYD 162 (162)
Q Consensus 143 --~~~~~----~~~~~~v~~v~~~pd 162 (162)
.+.++ .+|.+.|.+++|+||
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPd 193 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYED 193 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETT
T ss_pred ceeeeeeecccccccccEEEEEEcCC
Confidence 25665 677889999999997
No 91
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=4.7e-22 Score=134.23 Aligned_cols=144 Identities=15% Similarity=0.169 Sum_probs=117.0
Q ss_pred ccccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCccc-ceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 10 SSLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGPEM-QKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
..+.+.|.+|+|+|+ +++|++|+.|++|+||+++..... ......+.+| ...|.+++|+|++++|++++
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h---------~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGH---------SHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCC---------SSCEEEEEECTTSSEEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCC---------CCCEEEEEECCCCCEEEEEc
Confidence 346677899999997 689999999999999887654311 1223334444 44899999999999999999
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee-eeeeccCCCceeEEEecCC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR-LCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~v~~~pd 162 (162)
.|+.|++|+............+...+... +++++.++++++.|+.+++||+..... ......|...+..++|+++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 99999999999888777777777788888 999999999999999999999976554 4445678889999999864
No 92
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.91 E-value=5.8e-23 Score=143.42 Aligned_cols=147 Identities=20% Similarity=0.290 Sum_probs=111.4
Q ss_pred ccEEEEEEeeCC--CeEEEEcCCCcEEEEEecCCcccceeeeeeee----------------------------eeeccC
Q psy1859 14 FQTRCIKCFPNK--QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKC----------------------------HRIKED 63 (162)
Q Consensus 14 ~~~~~i~~~~~~--~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~----------------------------~~~~~~ 63 (162)
..|.+++|+|++ ..|++++.|+.|++|+++...... ..+.+.. ......
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRP-EGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF 172 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEE-ECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCc-ceecccCccccccCcccccceEeccccchheeeeccceEEe
Confidence 558999999998 789999999999998876422100 0000000 000001
Q ss_pred cccceeceEEEEecCCCCEEEEecCCCeEEEEeCCC-cccee-------eeeecccceeEE-EcCCC-CEEEEecCCCeE
Q psy1859 64 GIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFN-KKRLC-------QFHRYDTGITSL-FHQEY-NTFATGGSDGYV 133 (162)
Q Consensus 64 ~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~-~~~~~-------~~~~~~~~v~~~-~~~~~-~~l~~~~~d~~i 133 (162)
..+|...|.+++|+|++++|+++ .|+.|++||++. ++.+. .+..|...+.++ |+|++ .++++++.|+.|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 23477789999999999999998 799999999995 44443 355788899999 99998 999999999999
Q ss_pred EEEeCCCcee----eeeeccCCC------------ceeEEEecCC
Q psy1859 134 NIWDGFNKKR----LCQFHRYDT------------GITSLCFSYD 162 (162)
Q Consensus 134 ~iwd~~~~~~----~~~~~~~~~------------~v~~v~~~pd 162 (162)
++||+++++. +..+..|.. .|.+++|+||
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS 296 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTT
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCC
Confidence 9999998886 677777775 8999999986
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=5.7e-22 Score=134.91 Aligned_cols=135 Identities=9% Similarity=0.106 Sum_probs=117.9
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
.+.+++|+|+++++++++.+|.|++|+.... ......+..|. ..|.+++|+|++.+|++++.|+.|++
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~d~~i~v 244 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNN---YEYVDSIDLHE---------KSISDMQFSPDLTYFITSSRDTNSFL 244 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTT---TEEEEEEECCS---------SCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCC---cEeEEEEecCC---------CceeEEEECCCCCEEEEecCCceEEE
Confidence 7899999999999999999999999766542 23333444443 37999999999999999999999999
Q ss_pred EeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCC--------------eEEEEeCCCceeeeeeccCCCceeEEEe
Q psy1859 95 WDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG--------------YVNIWDGFNKKRLCQFHRYDTGITSLCF 159 (162)
Q Consensus 95 wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~--------------~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 159 (162)
||+++++.+..+. +...+..+ |+|+++++++++.++ .+++||+.+++.+..+..|...|++++|
T Consensus 245 ~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 323 (369)
T 3zwl_B 245 VDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAI 323 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEE
Confidence 9999988888776 67788899 999999999999888 8999999999999999999999999999
Q ss_pred cCC
Q psy1859 160 SYD 162 (162)
Q Consensus 160 ~pd 162 (162)
+||
T Consensus 324 s~~ 326 (369)
T 3zwl_B 324 SPQ 326 (369)
T ss_dssp CTT
T ss_pred CCC
Confidence 986
No 94
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=7.4e-23 Score=142.95 Aligned_cols=144 Identities=14% Similarity=0.170 Sum_probs=116.3
Q ss_pred ccccccEEEEEEeeC-CCeEEEEcCCCcEEEEEecCCc------ccceeeeeeeeeeeccCcccceeceEEEEecCCCC-
Q psy1859 10 SSLKFQTRCIKCFPN-KQGYVLSSIEGRAAVEYLDTGP------EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN- 81 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~-~~~l~~~~~~g~i~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~- 81 (162)
..+.+.+.+++|+|+ +.++++++.+|.|++|++.... ........+.+|. ..|.+++|+|++.
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQ---------KEGYGLSWNPNLNG 195 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCS---------SCCCCEEECTTSTT
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCC---------CCeEEEEeCCCCCC
Confidence 445677899999997 6789999999999998876521 0123334444443 4799999999987
Q ss_pred EEEEecCCCeEEEEeCCCccc-------eeeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCc---eeeeeecc
Q psy1859 82 TFATGGSDGYVNIWDGFNKKR-------LCQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNK---KRLCQFHR 149 (162)
Q Consensus 82 ~l~~~~~d~~v~~wd~~~~~~-------~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~ 149 (162)
+|++++.||.|++||+..+.. ...+..|...+.++ |+| ++.++++++.|+.|++||++++ +.+..+..
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 999999999999999987322 34556788899999 999 7789999999999999999987 56777778
Q ss_pred CCCceeEEEecCC
Q psy1859 150 YDTGITSLCFSYD 162 (162)
Q Consensus 150 ~~~~v~~v~~~pd 162 (162)
|...|++++|+|+
T Consensus 276 ~~~~v~~i~~~p~ 288 (430)
T 2xyi_A 276 HTAEVNCLSFNPY 288 (430)
T ss_dssp CSSCEEEEEECSS
T ss_pred CCCCeEEEEeCCC
Confidence 9999999999985
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.8e-22 Score=149.55 Aligned_cols=142 Identities=15% Similarity=0.158 Sum_probs=118.8
Q ss_pred ccccccEEEEEEeeC--CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEE
Q psy1859 10 SSLKFQTRCIKCFPN--KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFAT 85 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~--~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~ 85 (162)
..+.+.|.+++|+|+ ++++++|+.||.|++|+.+... ......+..|. ..|.+++|+|+ +..+++
T Consensus 50 ~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~--~~~~~~~~~h~---------~~V~~v~~sp~~~~~~l~s 118 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR--WSQIAVHAVHS---------ASVNSVQWAPHEYGPLLLV 118 (753)
T ss_dssp CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE--EEEEEEECCCS---------SCEEEEEECCGGGCSEEEE
T ss_pred cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc--ccccccccCCC---------CCeEEEEECCCCCCCEEEE
Confidence 345678999999988 9999999999999998776533 33444444443 47999999999 999999
Q ss_pred ecCCCeEEEEeCCCcc--ceeeeeecccceeEE-EcC-------------CCCEEEEecCCCeEEEEeCCCc----eeee
Q psy1859 86 GGSDGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQ-------------EYNTFATGGSDGYVNIWDGFNK----KRLC 145 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~-------------~~~~l~~~~~d~~i~iwd~~~~----~~~~ 145 (162)
++.||.|++||++.+. ....+..|...+.++ |+| ++.++++++.||.|++||++++ ....
T Consensus 119 gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 198 (753)
T 3jro_A 119 ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 198 (753)
T ss_dssp EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeee
Confidence 9999999999999873 344566788899999 999 5899999999999999999876 5667
Q ss_pred eeccCCCceeEEEecCC
Q psy1859 146 QFHRYDTGITSLCFSYD 162 (162)
Q Consensus 146 ~~~~~~~~v~~v~~~pd 162 (162)
.+..|...|++++|+|+
T Consensus 199 ~~~~h~~~V~~l~~sp~ 215 (753)
T 3jro_A 199 TLEGHSDWVRDVAWSPT 215 (753)
T ss_dssp EECCCSSCEEEEEECCC
T ss_pred eecCCCCcEEEEEeccC
Confidence 77899999999999986
No 96
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=8.4e-23 Score=137.22 Aligned_cols=137 Identities=7% Similarity=-0.050 Sum_probs=97.8
Q ss_pred cEEEEEEee---CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE--------
Q psy1859 15 QTRCIKCFP---NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-------- 83 (162)
Q Consensus 15 ~~~~i~~~~---~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-------- 83 (162)
.++.++|++ ++..|++++.|++|+||+.. + .+.+.++.++.. +...+.+++|+|++.++
T Consensus 180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~--T--Gk~l~tL~g~~~------~v~~v~~vafSpdG~~lvs~s~~~~ 249 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLK--T--GQLLKKMHIDDS------YQASVCHKAYSEMGLLFIVLSHPCA 249 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEEETTSEEEEEETT--T--CCEEEEEECCC---------CCCEEEEEEETTEEEEEEC----
T ss_pred ceeeEEeeccCCCCceEEEecCCCcEEEEECC--C--CcEEEEEcCCCc------ceeeeEEEEECCCCCEEEEeccCCC
Confidence 345567777 56889999999999996554 3 445555554332 22368888999999876
Q ss_pred ----EEecCCCeEEEEeCCCccceeeee-----ecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCce
Q psy1859 84 ----ATGGSDGYVNIWDGFNKKRLCQFH-----RYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGI 154 (162)
Q Consensus 84 ----~~~~~d~~v~~wd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v 154 (162)
++|+.|+++++||..+++.+..+. +|...+.+. +.++.++++++.|++|+|||+.+++++.++.+|...+
T Consensus 250 ~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg-~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~v 328 (356)
T 2w18_A 250 KESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG-DVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQH 328 (356)
T ss_dssp --------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE-EEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CC
T ss_pred cceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcc-ccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCe
Confidence 567889999999999988766542 333333333 3347889999999999999999999999999898766
Q ss_pred e-EEEecCC
Q psy1859 155 T-SLCFSYD 162 (162)
Q Consensus 155 ~-~v~~~pd 162 (162)
. +++|+||
T Consensus 329 vs~vafSPD 337 (356)
T 2w18_A 329 WSFVKWSGT 337 (356)
T ss_dssp CCEEEECSS
T ss_pred EEEEEECCC
Confidence 5 5899997
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.9e-22 Score=141.53 Aligned_cols=142 Identities=12% Similarity=0.104 Sum_probs=114.8
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC---CCEEEEec
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE---YNTFATGG 87 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~l~~~~ 87 (162)
.+...+.+++|+|++++|++++.+|.+.+|+.............+.+|. ..|.+++|+|+ +++|++++
T Consensus 147 ~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~---------~~v~~~~~sp~~~~~~~l~s~~ 217 (450)
T 2vdu_B 147 CFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHV---------SMLTDVHLIKDSDGHQFIITSD 217 (450)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECS---------SCEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeeccc---------CceEEEEEcCCCCCCcEEEEEc
Confidence 3456789999999999999999999999966543221110222334443 47999999999 89999999
Q ss_pred CCCeEEEEeCCCccceee-eeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc----------------
Q psy1859 88 SDGYVNIWDGFNKKRLCQ-FHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR---------------- 149 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~-~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---------------- 149 (162)
.|+.|++||+++++.+.. +.+|...+.++ |+ ++++|++++.|+.|++||+++++++..+..
T Consensus 218 ~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (450)
T 2vdu_B 218 RDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPP 296 (450)
T ss_dssp TTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC--
T ss_pred CCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccc
Confidence 999999999999888776 55789999999 99 999999999999999999999988777752
Q ss_pred ---------CCCceeEEEecCC
Q psy1859 150 ---------YDTGITSLCFSYD 162 (162)
Q Consensus 150 ---------~~~~v~~v~~~pd 162 (162)
....|.+++|+||
T Consensus 297 ~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 297 RFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp --------CBCCCEEEEEECSS
T ss_pred cccccccccceEEEEEEEEeCC
Confidence 2346888999885
No 98
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.1e-23 Score=141.72 Aligned_cols=96 Identities=13% Similarity=0.151 Sum_probs=84.4
Q ss_pred ceeceEEEEecC--CCCEEEEecCCCeEEEEeCCCccceeeee-ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce
Q psy1859 67 KIYPVNAISFHQ--EYNTFATGGSDGYVNIWDGFNKKRLCQFH-RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 67 ~~~~v~~~~~~p--~~~~l~~~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 142 (162)
|...|.+++|+| +++++++++.|+.|++||+++++.+.... .+...+.++ |+|++.++++|+.|+.|++||+++++
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 445799999999 99999999999999999999988766553 345579999 99999999999999999999999998
Q ss_pred ee-eeecc-CCCceeEEEecCC
Q psy1859 143 RL-CQFHR-YDTGITSLCFSYD 162 (162)
Q Consensus 143 ~~-~~~~~-~~~~v~~v~~~pd 162 (162)
.+ ..+.. |.++|++++|+||
T Consensus 204 ~~~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 204 QASSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp SCCEECCCCTTSCEEEEEECTT
T ss_pred CCccEEeccCCCCEEEEEEeCC
Confidence 77 77887 9999999999986
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.90 E-value=3.1e-22 Score=144.47 Aligned_cols=143 Identities=20% Similarity=0.174 Sum_probs=119.5
Q ss_pred ecccccc-EEEEEEee--CCCeEEEEcCCCcEEEEEecCCcc----cceeeeeeeeeeeccCcccceeceEEEEecCCCC
Q psy1859 9 ESSLKFQ-TRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPE----MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN 81 (162)
Q Consensus 9 ~~~~~~~-~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 81 (162)
...+... +.+++|+| ++++|++++.||.|++|+++.... .......+..| ...|.+++|+|+++
T Consensus 59 ~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~s~~~~ 129 (615)
T 1pgu_A 59 FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL---------AGPISDISWDFEGR 129 (615)
T ss_dssp ECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC---------SSCEEEEEECTTSS
T ss_pred EecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcc---------cccEEEEEEeCCCC
Confidence 3445667 99999999 999999999999999987753200 12333333433 34799999999999
Q ss_pred EEEEecCC----CeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCCceeeeeeccCCC---
Q psy1859 82 TFATGGSD----GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFNKKRLCQFHRYDT--- 152 (162)
Q Consensus 82 ~l~~~~~d----~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--- 152 (162)
++++++.+ +.|++|| .++.+..+..|...+.++ |+|+++ ++++++.|+.|++||+.+++.+..+..|..
T Consensus 130 ~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~ 207 (615)
T 1pgu_A 130 RLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGS 207 (615)
T ss_dssp EEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTC
T ss_pred EEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCc
Confidence 99999887 7899998 566778888899999999 999998 899999999999999999999999999998
Q ss_pred ceeEEEecCC
Q psy1859 153 GITSLCFSYD 162 (162)
Q Consensus 153 ~v~~v~~~pd 162 (162)
.|++++|+||
T Consensus 208 ~v~~~~~~~~ 217 (615)
T 1pgu_A 208 FVRDVEFSPD 217 (615)
T ss_dssp CEEEEEECST
T ss_pred eEEEEEECCC
Confidence 9999999986
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.90 E-value=2.3e-22 Score=136.48 Aligned_cols=134 Identities=14% Similarity=0.148 Sum_probs=110.6
Q ss_pred cEEEEE----EeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC---CCCEEEEec
Q psy1859 15 QTRCIK----CFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ---EYNTFATGG 87 (162)
Q Consensus 15 ~~~~i~----~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~l~~~~ 87 (162)
.+.+++ |+|+++++++++.+|.+++|+..... ... ...+ ...|.+++|+| ++..+++++
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~-~~~~---------~~~v~~~~~~~~~~~~~~l~~~~ 231 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA----LRW-ETNI---------KNGVCSLEFDRKDISMNKLVATS 231 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE----EEE-EEEC---------SSCEEEEEESCSSSSCCEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc----eee-ecCC---------CCceEEEEcCCCCCCCCEEEEEC
Confidence 677777 77899999999999999996655432 221 1222 33799999999 899999999
Q ss_pred CCCeEEEEeCCCccceeeee-----ecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCCc-------------------
Q psy1859 88 SDGYVNIWDGFNKKRLCQFH-----RYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFNK------------------- 141 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~-----~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~------------------- 141 (162)
.|+.|++||+++++....+. .|...+.++ |+|+++ ++++++.|+.|++||++++
T Consensus 232 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~ 311 (357)
T 3i2n_A 232 LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSV 311 (357)
T ss_dssp STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEE
T ss_pred CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccc
Confidence 99999999999887766655 788999999 999998 8999999999999999753
Q ss_pred eeeeeeccCCCceeEEEecCC
Q psy1859 142 KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 142 ~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.+..+..|...|++++|+||
T Consensus 312 ~~~~~~~~~~~~v~~~~~s~~ 332 (357)
T 3i2n_A 312 SLLQNVTLSTQPISSLDWSPD 332 (357)
T ss_dssp EEEEEEECCSSCEEEEEECSS
T ss_pred ceeeccccCCCCeeEEEEcCC
Confidence 456677889999999999986
No 101
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.90 E-value=1.1e-21 Score=131.24 Aligned_cols=147 Identities=13% Similarity=0.195 Sum_probs=110.5
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeecc-----------------------------
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKE----------------------------- 62 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 62 (162)
....|.+++|+|+++++++|+.||.|++|+....+ ....+.+|....
T Consensus 66 ~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~----~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~ 141 (318)
T 4ggc_A 66 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK----RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH 141 (318)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce----eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCce
Confidence 44568999999999999999999999997765432 222222221100
Q ss_pred ---CcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCcccee----ee-----------------------------
Q psy1859 63 ---DGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC----QF----------------------------- 106 (162)
Q Consensus 63 ---~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~----~~----------------------------- 106 (162)
...+|...+..++++++++++++++.|+.|++||+++++... ..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 221 (318)
T 4ggc_A 142 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR 221 (318)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTC
T ss_pred eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCC
Confidence 123567789999999999999999999999999998653110 00
Q ss_pred ---------------eecccceeEE-EcCCCCEEEEec--CCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 107 ---------------HRYDTGITSL-FHQEYNTFATGG--SDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 107 ---------------~~~~~~v~~~-~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..+...+..+ |+|++..+++++ .|+.|++||+++++++.++.+|.+.|++++|+||
T Consensus 222 ~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd 295 (318)
T 4ggc_A 222 HIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD 295 (318)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 0112345566 888888776654 7999999999999999999999999999999996
No 102
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.90 E-value=5.8e-22 Score=137.22 Aligned_cols=140 Identities=16% Similarity=0.181 Sum_probs=114.1
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEec
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGG 87 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~ 87 (162)
...+...+.+++|+|++++|++++.|+.|++|+... ......+..|. ..|.+++|+|++ .++++++
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~----~~~~~~~~~~~---------~~v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS----SIPKFTKTNHN---------AAVKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC----SSEEEEECCCS---------SCCCEEEECTTSTTEEEEEC
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC----CCccEEecCCc---------ceEEEEEECCCCCCEEEEec
Confidence 344667889999999999999999999999966553 33344444443 379999999987 6677755
Q ss_pred --CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEE--ecCCCeEEEEeCCCceeee--eeccCCCceeEEEec
Q psy1859 88 --SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFAT--GGSDGYVNIWDGFNKKRLC--QFHRYDTGITSLCFS 160 (162)
Q Consensus 88 --~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~--~~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~v~~~ 160 (162)
.|+.|++||+++++.+..+. +...+.++ |+|+++++++ |+.|+.|++||+.+++... .+.+|...|.+++|+
T Consensus 280 gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 280 GTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp CTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred CCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 79999999999998888775 56789999 9999999999 5589999999999866544 466899999999999
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
||
T Consensus 359 ~d 360 (401)
T 4aez_A 359 PD 360 (401)
T ss_dssp TT
T ss_pred CC
Confidence 86
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.90 E-value=7e-22 Score=134.10 Aligned_cols=144 Identities=17% Similarity=0.279 Sum_probs=111.9
Q ss_pred cceeeeccccccEEEEEEeeCCCeEE-EEcC---CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC
Q psy1859 4 IMQRRESSLKFQTRCIKCFPNKQGYV-LSSI---EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE 79 (162)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~~~~~l~-~~~~---~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 79 (162)
........+...+.+++|+|++..++ +++. |+.++||+++... ...... ..| ...|.+++|+|+
T Consensus 9 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~--~~~~~~-~~~---------~~~v~~~~~~~~ 76 (357)
T 3i2n_A 9 IIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD--LKLLRE-IEK---------AKPIKCGTFGAT 76 (357)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS--EEEEEE-EEE---------SSCEEEEECTTC
T ss_pred HhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc--ccceee-ecc---------cCcEEEEEEcCC
Confidence 33444455778999999999986655 5555 8999998776533 222222 123 337999999998
Q ss_pred ---CCEEEEecCCCeEEEEeCCCcc-ceeeeeecccceeEE-E------cCCCCEEEEecCCCeEEEEeCCCce-eeeee
Q psy1859 80 ---YNTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGITSL-F------HQEYNTFATGGSDGYVNIWDGFNKK-RLCQF 147 (162)
Q Consensus 80 ---~~~l~~~~~d~~v~~wd~~~~~-~~~~~~~~~~~v~~~-~------~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~ 147 (162)
+.+|++++.|+.|++||+.+++ .+..+..|...+.++ | +|++++|++++.|+.|++||+++++ .+..+
T Consensus 77 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 156 (357)
T 3i2n_A 77 SLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANM 156 (357)
T ss_dssp CTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEE
T ss_pred CCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceec
Confidence 6999999999999999999987 788888999999998 6 5789999999999999999999886 66667
Q ss_pred ccCCC----ceeEEEe
Q psy1859 148 HRYDT----GITSLCF 159 (162)
Q Consensus 148 ~~~~~----~v~~v~~ 159 (162)
..|.+ .+.+++|
T Consensus 157 ~~~~~~~~~~v~~~~~ 172 (357)
T 3i2n_A 157 EPVQGENKRDCWTVAF 172 (357)
T ss_dssp CCCTTSCCCCEEEEEE
T ss_pred cccCCCCCCceEEEEE
Confidence 65544 7888884
No 104
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=3.6e-21 Score=129.91 Aligned_cols=152 Identities=18% Similarity=0.205 Sum_probs=119.1
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeee------e----------eeee--------------e
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKY------A----------FKCH--------------R 59 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~------~----------~~~~--------------~ 59 (162)
..+...+.+++|+|++++|++++.|+.+++|+............ . +.+. .
T Consensus 83 ~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~ 162 (340)
T 4aow_A 83 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 162 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce
Confidence 33467789999999999999999999999977644321100000 0 0000 0
Q ss_pred eccCcccceeceEEEEecCCC--CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEE
Q psy1859 60 IKEDGIEKIYPVNAISFHQEY--NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIW 136 (162)
Q Consensus 60 ~~~~~~~~~~~v~~~~~~p~~--~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iw 136 (162)
......+|...+..++|++++ .++++++.|+.|++||+++++.+..+..|...|+++ |+|++++|++++.|+.|++|
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iw 242 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 242 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 000234567789999998875 578899999999999999999999999999999999 99999999999999999999
Q ss_pred eCCCceeeeeeccCCCceeEEEecCC
Q psy1859 137 DGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 137 d~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+++.+.+..+.. ...|.+++|+|+
T Consensus 243 d~~~~~~~~~~~~-~~~v~~~~~~~~ 267 (340)
T 4aow_A 243 DLNEGKHLYTLDG-GDIINALCFSPN 267 (340)
T ss_dssp ETTTTEEEEEEEC-SSCEEEEEECSS
T ss_pred EeccCceeeeecC-CceEEeeecCCC
Confidence 9999998888874 457999999985
No 105
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=1e-21 Score=145.99 Aligned_cols=141 Identities=17% Similarity=0.202 Sum_probs=120.7
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEEecC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATGGS 88 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~ 88 (162)
..+...+.+++|+|+++++++++.||.+++|+++... .....+..|. ..|.+++|+| ++..+++++.
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~~~---------~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---ALEQTFEGHE---------HFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS---EEEEEEECCS---------SCEEEEEEETTEEEEEEEEET
T ss_pred ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc---eEEEEEcCCC---------CcEEEEEEEcCCCCEEEEEeC
Confidence 3456778999999999999999999999998876532 3333444444 3799999999 7899999999
Q ss_pred CCeEEEEeCCCccceeeeeecc-cceeEE-EcC--CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYD-TGITSL-FHQ--EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~-~~v~~~-~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+.|++||+.+++....+..+. ..+..+ |+| ++.++++++.|+.|++||+++++.+..+..|...|.+++|+|+
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 239 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 9999999999887777776554 788899 999 9999999999999999999999999999999999999999986
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.89 E-value=2.8e-21 Score=134.53 Aligned_cols=143 Identities=17% Similarity=0.215 Sum_probs=114.5
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEE--e
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFAT--G 86 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~--~ 86 (162)
..+...+..+.++|+++++++++.|+.+++|+................ |...|.+++|+|.+ .++++ |
T Consensus 227 ~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~---------~~~~V~~~~~~p~~~~~la~~~g 297 (420)
T 4gga_A 227 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ---------HQGAVKAVAWCPWQSNVLATGGG 297 (420)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECC---------CSSCEEEEEECTTCTTEEEEEEC
T ss_pred cccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecc---------cCCceeeeeeCCCcccEEEEEee
Confidence 345566788999999999999999999999776654321222222222 44479999999987 56654 4
Q ss_pred cCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEec--CCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG--SDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.|+.|++||+.++++...+..+ ..+..+ |+|+++.+++++ .|+.|++||+.+++++.++.+|.+.|++++|+||
T Consensus 298 s~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spd 375 (420)
T 4gga_A 298 TSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD 375 (420)
T ss_dssp TTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred cCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 68999999999999888877654 567777 999999888764 7899999999999999999999999999999997
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.89 E-value=1.4e-21 Score=132.08 Aligned_cols=134 Identities=14% Similarity=0.223 Sum_probs=112.0
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecC-CcccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEEecCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDT-GPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATGGSD 89 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d 89 (162)
+...+.+++|+|++ +++++.++.+++|+... .. ......... |...+.+++|+| +++++++++.|
T Consensus 149 ~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~---------~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCED--DNGTIEESG---------LKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTT--CCCEEEECS---------CSSCEEEEEECSGGGCEEEEEETT
T ss_pred eCCceEEEEecCCc--EEEEeCCCeEEEEECCcccc--ccceeeecC---------CCCceeEEEECCCCCCEEEEEecC
Confidence 56788999999887 89999999999977664 22 111111112 333799999999 99999999999
Q ss_pred CeEEEEeCCCc------cceeeeeeccc---------ceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-CC
Q psy1859 90 GYVNIWDGFNK------KRLCQFHRYDT---------GITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY-DT 152 (162)
Q Consensus 90 ~~v~~wd~~~~------~~~~~~~~~~~---------~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~ 152 (162)
|.+++|+++.. +....+..|.. .+.++ |+|++++|++++.||.|++||+++++.+..+..| ..
T Consensus 216 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~ 295 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED 295 (342)
T ss_dssp SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSS
T ss_pred CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCC
Confidence 99999999886 67777877755 89999 9999999999999999999999999999999988 99
Q ss_pred ceeEEE
Q psy1859 153 GITSLC 158 (162)
Q Consensus 153 ~v~~v~ 158 (162)
.|++++
T Consensus 296 ~v~~~~ 301 (342)
T 1yfq_A 296 SVVKIA 301 (342)
T ss_dssp EEEEEE
T ss_pred CceEec
Confidence 999987
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=1.9e-22 Score=139.46 Aligned_cols=116 Identities=12% Similarity=0.037 Sum_probs=92.1
Q ss_pred EEEeeCCCeEEEEcCCCcEEEEEecCCcccc-eeeeeeeeeeeccCcccceeceEEEEecC--------CCCEEEEecCC
Q psy1859 19 IKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQ-KMKYAFKCHRIKEDGIEKIYPVNAISFHQ--------EYNTFATGGSD 89 (162)
Q Consensus 19 i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--------~~~~l~~~~~d 89 (162)
..+.+++.++++++.|++|+||+.+..+... .....+.+ |.+.|.+++|+| ++++|++++.|
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~g---------H~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSG---------HHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTS---------CSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCC---------CCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 3345567789999999999998876543111 11122333 555899999998 78899999999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCCcee
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFNKKR 143 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~~~ 143 (162)
++|++||++++.++..+..|...+.++ |+|++. +|++++.|++|++||+++++.
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 999999999888888888899999999 999874 899999999999999988754
No 109
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=4.5e-21 Score=134.73 Aligned_cols=141 Identities=18% Similarity=0.196 Sum_probs=116.9
Q ss_pred ccccccEEEEEEee--CCCeEEEEcCCCcEEEEEecCCccccee-------------------eeeeeeeeeccCcccce
Q psy1859 10 SSLKFQTRCIKCFP--NKQGYVLSSIEGRAAVEYLDTGPEMQKM-------------------KYAFKCHRIKEDGIEKI 68 (162)
Q Consensus 10 ~~~~~~~~~i~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 68 (162)
..+...+.++++++ +++++++++.||.+++|+.......... ...+. +|.
T Consensus 200 ~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 270 (464)
T 3v7d_B 200 EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR---------GHM 270 (464)
T ss_dssp CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC---------CCS
T ss_pred CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc---------Ccc
Confidence 34567889999985 6789999999999999877643311100 11112 244
Q ss_pred eceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy1859 69 YPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 69 ~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
..+.++ ++++.++++++.|+.|++||+++++.+..+..|...+.++ |+|+++++++++.|+.|++||+++++++..+
T Consensus 271 ~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 271 ASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp SCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 467766 6778999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ccCCCceeEEEecC
Q psy1859 148 HRYDTGITSLCFSY 161 (162)
Q Consensus 148 ~~~~~~v~~v~~~p 161 (162)
.+|...|.+++|++
T Consensus 349 ~~h~~~v~~~~~~~ 362 (464)
T 3v7d_B 349 QGHTALVGLLRLSD 362 (464)
T ss_dssp CCCSSCEEEEEECS
T ss_pred eCCCCcEEEEEEcC
Confidence 99999999999986
No 110
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9.9e-21 Score=126.34 Aligned_cols=137 Identities=14% Similarity=0.145 Sum_probs=113.8
Q ss_pred eeeccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 7 RRESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 7 ~~~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
.....+...+.+++| |++++|++++.||.|++|+.+. ......+..|. ..|.+++|+|++.+++++
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~----~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~ 77 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD----QWLGTVVYTGQ---------GFLNSVCYDSEKELLLFG 77 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS----SEEEEEEEECS---------SCEEEEEEETTTTEEEEE
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC----CEEEEEeecCC---------ccEEEEEECCCCCEEEEe
Confidence 344556788999999 9999999999999999977654 23333344443 379999999999999999
Q ss_pred cCCCeEEEEeCCCc---cceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 87 GSDGYVNIWDGFNK---KRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 87 ~~d~~v~~wd~~~~---~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+.|+.+++|++... +.+..+..|...+.++ | +++++++++.|+.|++|| .++.+..+..|...+.+++|.|
T Consensus 78 ~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~ 152 (313)
T 3odt_A 78 GKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVS 152 (313)
T ss_dssp ETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEE
T ss_pred cCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEcc
Confidence 99999999998864 4567777889999999 8 578999999999999999 6677888889999999999976
No 111
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.88 E-value=5.6e-21 Score=147.63 Aligned_cols=123 Identities=17% Similarity=0.240 Sum_probs=105.9
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC--CCEEEEecC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE--YNTFATGGS 88 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~ 88 (162)
.+...+.+++|+|+++++++++.|+.|++|++.. .+....+.+|.. .|.+++|+|+ +.++++++.
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~----~~~~~~~~~~~~---------~v~~~~~~~~~~~~~l~sg~~ 721 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT----GKLVHTYDEHSE---------QVNCCHFTNKSNHLLLATGSN 721 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----CCEEEEEECCSS---------CEEEEEECSSSSCCEEEEEET
T ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC----CceEEEEcCCCC---------cEEEEEEecCCCceEEEEEeC
Confidence 4567889999999999999999999999976654 344555555544 7999999994 468999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 146 (162)
|+.|++||+++++.+..+..|...+.++ |+|+++++++++.|+.|++||+++++....
T Consensus 722 d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~ 780 (1249)
T 3sfz_A 722 DFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKS 780 (1249)
T ss_dssp TSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEE
T ss_pred CCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccce
Confidence 9999999999999999999999999999 999999999999999999999987765443
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=1.5e-21 Score=134.94 Aligned_cols=139 Identities=11% Similarity=0.018 Sum_probs=91.9
Q ss_pred ccccccEEEEEEee--------CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-
Q psy1859 10 SSLKFQTRCIKCFP--------NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY- 80 (162)
Q Consensus 10 ~~~~~~~~~i~~~~--------~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~- 80 (162)
..+.+.|.+++|+| ++++|++++.|++|+||+.... .....+..|. .+|.+++|+|++
T Consensus 133 ~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~----~~~~~~~~~~---------~~v~~v~~~p~~~ 199 (393)
T 4gq1_A 133 SGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE----GPILAGYPLS---------SPGISVQFRPSNP 199 (393)
T ss_dssp TSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT----EEEEEEEECS---------SCEEEEEEETTEE
T ss_pred CCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC----ceeeeecCCC---------CCcEEEEECCCCC
Confidence 34566789999998 7899999999999999776543 2333333443 379999999987
Q ss_pred CEEEEecCCCeEEEEeCCCccceeee-------------------------eecccceeEE-Ec-CCCCEEEEecCCCeE
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKRLCQF-------------------------HRYDTGITSL-FH-QEYNTFATGGSDGYV 133 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~~~~~-------------------------~~~~~~v~~~-~~-~~~~~l~~~~~d~~i 133 (162)
.+|++++.|+.|++||+++++..... ..|...+.++ |+ |+++.+++++.|+.+
T Consensus 200 ~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i 279 (393)
T 4gq1_A 200 NQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAW 279 (393)
T ss_dssp EEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEE
T ss_pred ceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCE
Confidence 58999999999999999876533221 2355677788 55 799999999999999
Q ss_pred EEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 134 NIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 134 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
++||+.+++....+..|...+..+.+.|
T Consensus 280 ~vwd~~~~~~~~~l~~~~~~~~~~~~~~ 307 (393)
T 4gq1_A 280 LRWNLFANNDYNEISDSTMKLGPKNLLP 307 (393)
T ss_dssp EEEEC-------------------CCSC
T ss_pred EEEECccCCCCceEeeecCccccEEEcc
Confidence 9999998887777776766666666555
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.87 E-value=1.6e-20 Score=129.38 Aligned_cols=137 Identities=18% Similarity=0.247 Sum_probs=112.6
Q ss_pred ccccEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC---CEEEEec
Q psy1859 12 LKFQTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY---NTFATGG 87 (162)
Q Consensus 12 ~~~~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~l~~~~ 87 (162)
+...+.+++|+| ++++|++++.||.+++|+.+.. .....+. +. ..+.++.|+|.+ .++++++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~ 163 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL----QTADVFN-FE---------ETVYSHHMSPVSTKHCLVAVGT 163 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT----EEEEEEE-CS---------SCEEEEEECSSCSSCCEEEEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC----ccceecc-CC---------CceeeeEeecCCCCCcEEEEEc
Confidence 667899999999 7789999999999999766543 2222222 22 268899998854 4999999
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEecCCCeEEEEeCCCce-eeeee---------------cc
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGGSDGYVNIWDGFNKK-RLCQF---------------HR 149 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~~-~~~~~---------------~~ 149 (162)
.|+.|++||+++++.+..+..|...+.++ |+|+++ ++++++.|+.|++||++++. .+..+ ..
T Consensus 164 ~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (408)
T 4a11_B 164 RGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA 243 (408)
T ss_dssp SSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS
T ss_pred CCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccc
Confidence 99999999999999999999999999999 999998 58999999999999998765 33333 46
Q ss_pred CCCceeEEEecCC
Q psy1859 150 YDTGITSLCFSYD 162 (162)
Q Consensus 150 ~~~~v~~v~~~pd 162 (162)
|...|.+++|+||
T Consensus 244 ~~~~v~~~~~~~~ 256 (408)
T 4a11_B 244 HNGKVNGLCFTSD 256 (408)
T ss_dssp CSSCEEEEEECTT
T ss_pred ccCceeEEEEcCC
Confidence 8889999999986
No 114
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.87 E-value=2.1e-20 Score=131.37 Aligned_cols=138 Identities=15% Similarity=0.160 Sum_probs=112.4
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEec--CCCCEEEEec
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFH--QEYNTFATGG 87 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--p~~~~l~~~~ 87 (162)
..+.+.+.+++|+|++ .+++|+.||.|++|+++. .+....+.+|. ..|.+++|+ +++.++++++
T Consensus 159 ~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~----~~~~~~~~~h~---------~~v~~l~~~~~~~~~~l~s~s 224 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK----GCCTHVFEGHN---------STVRCLDIVEYKNIKYIVTGS 224 (464)
T ss_dssp CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT----TEEEEEECCCS---------SCEEEEEEEESSSCEEEEEEE
T ss_pred eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC----CcEEEEECCCC---------CccEEEEEecCCCCCEEEEEc
Confidence 3567789999999987 899999999999976653 33444555544 379999998 5678999999
Q ss_pred CCCeEEEEeCCCccce-----------------------eeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceee
Q psy1859 88 SDGYVNIWDGFNKKRL-----------------------CQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRL 144 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~-----------------------~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 144 (162)
.|+.|++||++++... ..+..|...+.+ +++++.++++++.|+.|++||+++++++
T Consensus 225 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~d~~i~vwd~~~~~~~ 303 (464)
T 3v7d_B 225 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT-VSGHGNIVVSGSYDNTLIVWDVAQMKCL 303 (464)
T ss_dssp TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEE-EEEETTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEE-EcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 9999999999876532 234455555555 4778999999999999999999999999
Q ss_pred eeeccCCCceeEEEecCC
Q psy1859 145 CQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 145 ~~~~~~~~~v~~v~~~pd 162 (162)
..+.+|...|.+++|+||
T Consensus 304 ~~~~~~~~~v~~~~~~~~ 321 (464)
T 3v7d_B 304 YILSGHTDRIYSTIYDHE 321 (464)
T ss_dssp EEECCCSSCEEEEEEETT
T ss_pred EEecCCCCCEEEEEEcCC
Confidence 999999999999999986
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=3.3e-20 Score=126.74 Aligned_cols=75 Identities=12% Similarity=0.288 Sum_probs=69.8
Q ss_pred ceeceEEEEecCCCCEEEEecCCCe-EEEEeCCCccceeeee-e-cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 67 KIYPVNAISFHQEYNTFATGGSDGY-VNIWDGFNKKRLCQFH-R-YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 67 ~~~~v~~~~~~p~~~~l~~~~~d~~-v~~wd~~~~~~~~~~~-~-~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
|...|.+++|+|++++|++++.|+. |++||+++++.+..+. + |...+.++ |+|++++|++++.|++|++||++.+
T Consensus 194 h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 194 HTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred cCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 4558999999999999999999998 9999999999999888 4 88999999 9999999999999999999999765
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.86 E-value=1.2e-20 Score=131.42 Aligned_cols=131 Identities=13% Similarity=0.200 Sum_probs=98.2
Q ss_pred eccccccEEEEEEeeCCC-eEEE--EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEE
Q psy1859 9 ESSLKFQTRCIKCFPNKQ-GYVL--SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFAT 85 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~-~l~~--~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 85 (162)
.......+.+++|+|.+. .+++ |+.|+.|++|+.. + ......+..+. .+.++.|+|++..+++
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~--t--~~~~~~~~~~~----------~v~~~~~~~~~~~lv~ 337 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC--S--GACLSAVDAHS----------QVCSILWSPHYKELIS 337 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT--T--TEEEEEEECSS----------CEEEEEEETTTTEEEE
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC--c--cccceeecccc----------ceeeeeecCCCCeEEE
Confidence 344567889999999755 4444 4578999996554 3 33343433333 5899999999988776
Q ss_pred ec--CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCc
Q psy1859 86 GG--SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTG 153 (162)
Q Consensus 86 ~~--~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 153 (162)
++ .|+.|++||+.+++++..+.+|...|+++ |+|+|++|++|+.|++|++||+....+....+.+...
T Consensus 338 ~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~ 408 (420)
T 4gga_A 338 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKAS 408 (420)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC---------
T ss_pred EEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCC
Confidence 54 78999999999999999999999999999 9999999999999999999999876655555444433
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=3.1e-20 Score=126.83 Aligned_cols=77 Identities=13% Similarity=0.125 Sum_probs=68.8
Q ss_pred ecCCCeEEEEeCCCcc---------------c-eeeeeecccceeEE-EcCCCCEEEEecCCCe-EEEEeCCCceeeeee
Q psy1859 86 GGSDGYVNIWDGFNKK---------------R-LCQFHRYDTGITSL-FHQEYNTFATGGSDGY-VNIWDGFNKKRLCQF 147 (162)
Q Consensus 86 ~~~d~~v~~wd~~~~~---------------~-~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~ 147 (162)
++.||.|++||+++++ + +..+.+|...|.++ |+|+|++|++++.|++ |++||+++++++..+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 6789999999998765 2 67788999999999 9999999999999998 999999999999999
Q ss_pred c-c-CCCceeEEEecCC
Q psy1859 148 H-R-YDTGITSLCFSYD 162 (162)
Q Consensus 148 ~-~-~~~~v~~v~~~pd 162 (162)
. + |...|++++|+||
T Consensus 235 ~~g~h~~~v~~~~~s~~ 251 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTD 251 (355)
T ss_dssp ECTTCCSCEEEEEECTT
T ss_pred EcCCCCCcEEEEEECCC
Confidence 8 5 9999999999996
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.84 E-value=3.6e-19 Score=124.39 Aligned_cols=132 Identities=14% Similarity=0.259 Sum_probs=108.5
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+...+.++++ +++++++|+.||.|++|+++.. +....+..|. ..|.+++|++ ..+++++.|+
T Consensus 171 ~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~---------~~v~~l~~~~--~~l~s~s~dg 233 (435)
T 1p22_A 171 GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG----EMLNTLIHHC---------EAVLHLRFNN--GMMVTCSKDR 233 (435)
T ss_dssp CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC----CEEEEECCCC---------SCEEEEECCT--TEEEEEETTS
T ss_pred CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC----cEEEEEcCCC---------CcEEEEEEcC--CEEEEeeCCC
Confidence 45567788887 7889999999999999766542 3344444443 4799999975 5999999999
Q ss_pred eEEEEeCCCccce---eeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 91 YVNIWDGFNKKRL---CQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 91 ~v~~wd~~~~~~~---~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.|++||+++++.. ..+..|...+.++ | +++++++++.|+.|++||+++++.+..+..|...|.+++|++
T Consensus 234 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 306 (435)
T 1p22_A 234 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 306 (435)
T ss_dssp CEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET
T ss_pred cEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCC
Confidence 9999999987655 5666788889988 8 788999999999999999999999999999999999998864
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.84 E-value=8.7e-20 Score=127.52 Aligned_cols=134 Identities=15% Similarity=0.214 Sum_probs=111.9
Q ss_pred eccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC
Q psy1859 9 ESSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS 88 (162)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 88 (162)
.......+.++++ +++++++|+.||.+++|+... .+....+.+|.. .|.+++|+ +.++++++.
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~---------~v~~~~~~--~~~l~~g~~ 314 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST----CEFVRTLNGHKR---------GIACLQYR--DRLVVSGSS 314 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTT----CCEEEEEECCSS---------CEEEEEEE--TTEEEEEET
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCc----CcEEEEEcCCCC---------cEEEEEeC--CCEEEEEeC
Confidence 3445567778887 788999999999999966543 344455555443 79999984 689999999
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCce---------eeeeeccCCCceeEEE
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKK---------RLCQFHRYDTGITSLC 158 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~---------~~~~~~~~~~~v~~v~ 158 (162)
|+.|++||+++++.+..+..|...+.++ | ++.++++|+.||.|++||++++. ++..+..|.+.|.+++
T Consensus 315 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 392 (435)
T 1p22_A 315 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 392 (435)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEE
T ss_pred CCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEE
Confidence 9999999999999999999999999999 8 78899999999999999997765 7888889999999999
Q ss_pred ecC
Q psy1859 159 FSY 161 (162)
Q Consensus 159 ~~p 161 (162)
|.+
T Consensus 393 ~~~ 395 (435)
T 1p22_A 393 FDE 395 (435)
T ss_dssp ECS
T ss_pred eCC
Confidence 854
No 120
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.84 E-value=1.6e-19 Score=120.76 Aligned_cols=134 Identities=14% Similarity=0.200 Sum_probs=105.4
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
...+|+||+++ .|++ +.|++|+||+.+.. +....+..+. |...|.+++|+|++++|++|+.|+.|++
T Consensus 27 y~~~l~WS~~~-~lAv-g~D~tV~iWd~~tg----~~~~~~~~~~-------~~~~V~~v~~~~~~~~l~sgs~Dg~v~i 93 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAV-ALDNSVYLWSASSG----DILQLLQMEQ-------PGEYISSVAWIKEGNYLAVGTSSAEVQL 93 (318)
T ss_dssp TCBCEEECTTS-EEEE-EETTEEEEEETTTC----CEEEEEECCS-------TTCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cceEEEECCCC-EEEE-EeCCEEEEEECCCC----CEEEEEEecC-------CCCeEEEEEECCCCCEEEEEECCCcEEE
Confidence 35679999875 5555 45899999665432 2333333222 3347999999999999999999999999
Q ss_pred EeCCCccceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCce-eeeeeccCCCceeEEEecCC
Q psy1859 95 WDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKK-RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 95 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~pd 162 (162)
||+++++.+..+..|...+.++ ++++..+++++.++.+++|+..... .+..+.+|...+..+.|+++
T Consensus 94 w~~~~~~~~~~~~~h~~~~~~~-~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
T 4ggc_A 94 WDVQQQKRLRNMTSHSARVGSL-SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD 161 (318)
T ss_dssp EETTTTEEEEEEECCSSCEEEE-EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred eecCCceeEEEecCccceEEEe-ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC
Confidence 9999999999998888777665 4567899999999999999997654 56677889999999998774
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=5.4e-19 Score=123.76 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=103.2
Q ss_pred EEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy1859 20 KCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFN 99 (162)
Q Consensus 20 ~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~ 99 (162)
++.++++++++|+.||.|++|+... .+....+.+|. ..|.+++|+ +..+++++.|+.|++||+.+
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~----~~~~~~~~~h~---------~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~ 188 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVT----GKCLRTLVGHT---------GGVWSSQMR--DNIIISGSTDRTLKVWNAET 188 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTT----CCEEEECCCCS---------SCEEEEEEE--TTEEEEEETTSCEEEEETTT
T ss_pred EEEEcCCEEEEEECCCcEEEEECCC----CcEEEEEcCCC---------CCEEEEEec--CCEEEEEeCCCeEEEEECCc
Confidence 3556789999999999999976653 33444555544 379999997 56899999999999999999
Q ss_pred ccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 100 KKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 100 ~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
++.+..+..|...+.++ |+ ++++++++.|+.|++||+++++.+..+..|...|.+++|..
T Consensus 189 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~ 249 (445)
T 2ovr_B 189 GECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 249 (445)
T ss_dssp TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECS
T ss_pred CcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECC
Confidence 98888888888899988 85 56799999999999999999888888888999999988843
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=9.5e-20 Score=127.56 Aligned_cols=143 Identities=8% Similarity=0.052 Sum_probs=105.9
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcc------cceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE----
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPE------MQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA---- 84 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~---- 84 (162)
....+++++++.++++++.++ +++|..+.... ........... ....+...|.+++|+|++++|+
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQG----LLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCC----EEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcc----ccccCCCcccEEEEcCCCCEEEEEEe
Confidence 467799999999999998887 77754321000 00000000000 0112344699999999999999
Q ss_pred EecCCCeEEEEeCCCc--------cc---eeeeeecccceeEE-EcCC-CCEEEEecCCCeEEEEeCCCceeeeeeccCC
Q psy1859 85 TGGSDGYVNIWDGFNK--------KR---LCQFHRYDTGITSL-FHQE-YNTFATGGSDGYVNIWDGFNKKRLCQFHRYD 151 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~~--------~~---~~~~~~~~~~v~~~-~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 151 (162)
+++.|+.|++||++++ ++ +..+..|...+.++ |+|+ +.+|++++.|++|++||++++..+.....|.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 7889999999998765 22 34455688999999 9997 8899999999999999999987776667788
Q ss_pred CceeEEEecCC
Q psy1859 152 TGITSLCFSYD 162 (162)
Q Consensus 152 ~~v~~v~~~pd 162 (162)
..|++++|+||
T Consensus 193 ~~v~~v~wspd 203 (434)
T 2oit_A 193 VAVTSVCWSPK 203 (434)
T ss_dssp GCEEEEEECTT
T ss_pred CceeEEEEcCC
Confidence 99999999986
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=1.7e-18 Score=121.23 Aligned_cols=131 Identities=15% Similarity=0.180 Sum_probs=106.0
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.+...+.+++++ ++.+++++.||.|++|+++. .+....+.+|.. .|.+++|+ +..+++++.|+
T Consensus 157 ~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~h~~---------~v~~~~~~--~~~l~s~s~dg 219 (445)
T 2ovr_B 157 GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET----GECIHTLYGHTS---------TVRCMHLH--EKRVVSGSRDA 219 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT----TEEEEEECCCSS---------CEEEEEEE--TTEEEEEETTS
T ss_pred CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc----CcEEEEECCCCC---------cEEEEEec--CCEEEEEeCCC
Confidence 455677888887 67899999999999976654 334444444443 78888885 46789999999
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
.|++||+.+++.+..+..|...+.++ | ++.++++++.|+.|++||+++++.+..+..|...|.+++|.
T Consensus 220 ~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 288 (445)
T 2ovr_B 220 TLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 288 (445)
T ss_dssp EEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC
T ss_pred EEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEEC
Confidence 99999999888888888888888888 8 67889999999999999998888888888888888888874
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=9.4e-18 Score=115.40 Aligned_cols=134 Identities=7% Similarity=0.030 Sum_probs=104.8
Q ss_pred cccEEEEEEeeCCCeE-EEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCCC
Q psy1859 13 KFQTRCIKCFPNKQGY-VLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSDG 90 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l-~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~ 90 (162)
...+.+++|+|+++++ ++++.++.|++|+.. + .+....+..+. .+.+++|+|+++.++ +++.++
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~--~--~~~~~~~~~~~----------~v~~~~~spdg~~l~~~~~~~~ 96 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTA--T--NNVIATVPAGS----------SPQGVAVSPDGKQVYVTNMASS 96 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETT--T--TEEEEEEECSS----------SEEEEEECTTSSEEEEEETTTT
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECC--C--CeEEEEEECCC----------CccceEECCCCCEEEEEECCCC
Confidence 3457899999999876 667789999996554 3 33333333222 599999999998664 566789
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEE-EEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTF-ATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++||+.+++.+..+.. ...+..+ |+|+++++ ++++.++.|++||+++++.+..+..+. .+.+++|+||
T Consensus 97 ~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~d 168 (391)
T 1l0q_A 97 TLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPD 168 (391)
T ss_dssp EEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTT
T ss_pred EEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCC
Confidence 999999999888777764 4567888 99999977 678889999999999999888877654 5789999986
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=1.1e-17 Score=115.07 Aligned_cols=134 Identities=6% Similarity=0.055 Sum_probs=104.4
Q ss_pred cccEEEEEEeeCCCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE-EEecCCC
Q psy1859 13 KFQTRCIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-ATGGSDG 90 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d~ 90 (162)
...+.+++|+|+++++++ ++.++.|++|+.. + .+....+..+. .+.+++|+|+++.+ ++++.++
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~--~--~~~~~~~~~~~----------~~~~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTT--S--NTVAGTVKTGK----------SPLGLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETT--T--TEEEEEEECSS----------SEEEEEECTTSSEEEEEETTTT
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECC--C--CeEEEEEeCCC----------CcceEEECCCCCEEEEEeCCCC
Confidence 347889999999998755 4567999996554 3 23333333222 58999999999866 7888899
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEE-EEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTF-ATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.|++||+.+++.+..+..+ ..+..+ |+|+++++ ++++.++.|++||+++++.+..+. +...+.+++|+||
T Consensus 139 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~ 210 (391)
T 1l0q_A 139 TVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPE 210 (391)
T ss_dssp EEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTT
T ss_pred EEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCC
Confidence 9999999998888777654 456788 99999987 577789999999999998887775 4567899999986
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.81 E-value=7.2e-19 Score=122.44 Aligned_cols=140 Identities=12% Similarity=0.044 Sum_probs=109.3
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+.+++|+|++..+++++.++.|++|+.+..+ ...... ... ..+|...|.+++|+|++.++++++.|+.|+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~--~~~~~~--~~~----~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQ--TVRLSP--PEK----YKKKLGFVETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCC--EEEECC--CHH----HHTTCCEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCe--EeeecC--ccc----ccccCCceeEEEEcCCCEEEEEECCCCEEE
Confidence 334578999977778888888999996654322 221111 000 112555799999999999999999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEE-EecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFA-TGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+||+++++.+..+..+...+.++ |+|++++++ +++.|+.|++||+++++.+..+..+ ..+.+++|+||
T Consensus 195 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~ 264 (433)
T 3bws_A 195 VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKD 264 (433)
T ss_dssp EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTT
T ss_pred EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCC
Confidence 99999988888888888899999 999999885 4558999999999999988877654 46899999986
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=2.5e-18 Score=115.69 Aligned_cols=121 Identities=12% Similarity=0.053 Sum_probs=85.8
Q ss_pred cEEEEEEeeC----CCeEEEEc--------------------CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceec
Q psy1859 15 QTRCIKCFPN----KQGYVLSS--------------------IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYP 70 (162)
Q Consensus 15 ~~~~i~~~~~----~~~l~~~~--------------------~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (162)
.+++++++|+ ++.++.++ .|+.|++|.+... .+.+..+..|.. .
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d---G~~~~s~~~~~~---------~ 180 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAED---GGGKENQFLMPP---------E 180 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTT---SCEEEEEEECCC---------S
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCC---CceeeeeccCCC---------c
Confidence 4566777777 66666544 2677777666432 223333444443 6
Q ss_pred eEEEEecC---CCCEEEEecCCCeEEEEeCCCccceeeeeecc---cceeEE-EcCCCCEE------------EEecCCC
Q psy1859 71 VNAISFHQ---EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD---TGITSL-FHQEYNTF------------ATGGSDG 131 (162)
Q Consensus 71 v~~~~~~p---~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~---~~v~~~-~~~~~~~l------------~~~~~d~ 131 (162)
+..++|+| ++.+|++++.|++|++||++++++++.+..+. ..+.++ |+|+|.++ ++|+.|+
T Consensus 181 v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~ 260 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVF 260 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCE
T ss_pred eeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCc
Confidence 88889988 67999999999999999999999999987543 356677 99999876 5677899
Q ss_pred eEEEEeCCCceeeeee
Q psy1859 132 YVNIWDGFNKKRLCQF 147 (162)
Q Consensus 132 ~i~iwd~~~~~~~~~~ 147 (162)
+|++||..+++.+.++
T Consensus 261 tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 261 QLIVINPKTTLSVGVM 276 (356)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCEEEEEE
Confidence 9999999999887665
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.80 E-value=1e-17 Score=116.71 Aligned_cols=135 Identities=12% Similarity=0.027 Sum_probs=100.7
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCC---cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-Eec
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEG---RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGG 87 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~ 87 (162)
....+.+++|+|+|+.+++++.++ .+++|+.+..+ .. .+..+. ..+.+++|+|+|+.|+ +++
T Consensus 177 ~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--~~---~l~~~~---------~~~~~~~~spdg~~la~~~~ 242 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--VR---QVASFP---------RHNGAPAFSPDGSKLAFALS 242 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EE---EEECCS---------SCEEEEEECTTSSEEEEEEC
T ss_pred CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--EE---EeecCC---------CcccCEEEcCCCCEEEEEEe
Confidence 456788999999999999998774 78885554322 22 222232 2689999999998777 666
Q ss_pred CCC--eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 88 SDG--YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-DG--YVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 88 ~d~--~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.++ .|++||+.+++. ..+..+...+..+ |+|||++|++++. ++ .|.+||+.+++. ..+..+...+.+++|+|
T Consensus 243 ~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp 320 (415)
T 2hqs_A 243 KTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSS 320 (415)
T ss_dssp TTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECT
T ss_pred cCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECC
Confidence 554 599999988765 5566677788899 9999998888775 44 788889987764 34555777899999999
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
|
T Consensus 321 d 321 (415)
T 2hqs_A 321 D 321 (415)
T ss_dssp T
T ss_pred C
Confidence 7
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.80 E-value=6.9e-18 Score=117.49 Aligned_cols=136 Identities=9% Similarity=-0.031 Sum_probs=107.7
Q ss_pred ccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE-EEecCCC
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-ATGGSDG 90 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d~ 90 (162)
..+.+.+++|+|+++.+++++.++.+++|+.+. .+....+..+. ..+.+++|+|+++.+ ++++.++
T Consensus 168 ~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~----~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~ 234 (433)
T 3bws_A 168 KLGFVETISIPEHNELWVSQMQANAVHVFDLKT----LAYKATVDLTG---------KWSKILLYDPIRDLVYCSNWISE 234 (433)
T ss_dssp TCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT----CCEEEEEECSS---------SSEEEEEEETTTTEEEEEETTTT
T ss_pred cCCceeEEEEcCCCEEEEEECCCCEEEEEECCC----ceEEEEEcCCC---------CCeeEEEEcCCCCEEEEEecCCC
Confidence 345778899999999999999999999966543 23333333333 369999999999776 5566899
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEec--------CCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG--------SDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~--------~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.|++||+++++.+..+..+ ..+..+ |+|+++++++++ .|+.|++||+++++.+..+ .|...+.+++|+|
T Consensus 235 ~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~ 312 (433)
T 3bws_A 235 DISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGN 312 (433)
T ss_dssp EEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECS
T ss_pred cEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECC
Confidence 9999999998887777653 457888 999999999887 4889999999998877665 4566889999998
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
|
T Consensus 313 ~ 313 (433)
T 3bws_A 313 T 313 (433)
T ss_dssp S
T ss_pred C
Confidence 6
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.78 E-value=1.8e-17 Score=115.38 Aligned_cols=137 Identities=10% Similarity=-0.011 Sum_probs=103.7
Q ss_pred cccccEEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
.....+.+++|+|++++|++++. ++...||.++...+... .+..+. ..+.+++|+|+|++|++++.+
T Consensus 264 ~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~---~l~~~~---------~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 264 DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ---RITWEG---------SQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE---ECCCSS---------SEEEEEEECTTSSEEEEEEEC
T ss_pred CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE---EEecCC---------CcccCeEECCCCCEEEEEECc
Confidence 34456788999999999888775 57667777776552211 112222 258899999999988887754
Q ss_pred ---CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCC---eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 90 ---GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG---YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 90 ---~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..|++||+.+++.. .+..+. .+..+ |+|+|++|++++.++ .|++||+. +.....+..|.+.|.+++|+|-
T Consensus 332 ~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 332 GGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp SSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCC
T ss_pred CCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccc
Confidence 68999999987653 344443 78888 999999999988776 89999996 5557778889999999999983
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=1.3e-17 Score=110.12 Aligned_cols=136 Identities=10% Similarity=-0.017 Sum_probs=103.4
Q ss_pred cEEEEEEeeCCCeEE-EEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-CCCeE
Q psy1859 15 QTRCIKCFPNKQGYV-LSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-SDGYV 92 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~-~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~v 92 (162)
.+..++|+|+++.++ ++..++.+.||.++.... .. ..+..+ ...+.+++|+|+++.++.++ .++.+
T Consensus 130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~-~~~~~~---------~~~~~~~~~s~dg~~l~~~~~~~~~~ 197 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VE-TRLTHG---------EGRNDGPDYSPDGRWIYFNSSRTGQM 197 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CE-EECCCS---------SSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred CccceEECCCCCEEEEEECCCCceEEEEEECCCC--cc-eEcccC---------CCccccceECCCCCEEEEEecCCCCc
Confidence 467889999999887 677889999998886542 21 122222 22689999999998777655 58899
Q ss_pred EEEeCC-CccceeeeeecccceeEE-EcCCCCEEEEecCC-----------CeEEEEeCCCcee--eeeeccCCCceeEE
Q psy1859 93 NIWDGF-NKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD-----------GYVNIWDGFNKKR--LCQFHRYDTGITSL 157 (162)
Q Consensus 93 ~~wd~~-~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d-----------~~i~iwd~~~~~~--~~~~~~~~~~v~~v 157 (162)
.+|++. .+.....+..+...+..+ |+|+|++|++++.+ +.|.+||+.+++. +..+..|...+.++
T Consensus 198 ~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 277 (297)
T 2ojh_A 198 QIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSP 277 (297)
T ss_dssp EEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSC
T ss_pred cEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccc
Confidence 999886 455666676677778888 99999999888765 5699999988764 44444778889999
Q ss_pred EecCC
Q psy1859 158 CFSYD 162 (162)
Q Consensus 158 ~~~pd 162 (162)
+|+||
T Consensus 278 ~~spd 282 (297)
T 2ojh_A 278 NWSPD 282 (297)
T ss_dssp CBCTT
T ss_pred eECCC
Confidence 99986
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.74 E-value=6.8e-17 Score=119.42 Aligned_cols=145 Identities=10% Similarity=-0.031 Sum_probs=100.2
Q ss_pred ccEEEEEEeeCCCeEEEEcC-CC-----cEEEEEecCCcccceeeeeeeeeee----------c---cCcccceeceEEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSI-EG-----RAAVEYLDTGPEMQKMKYAFKCHRI----------K---EDGIEKIYPVNAI 74 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~-~g-----~i~i~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~v~~~ 74 (162)
..+..++|+|||++|++++. ++ .|.+| +..++..........+.. . .........+.++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~--d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSY--DIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEE--ETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEE--ECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 34789999999999999987 77 67775 444322322222111110 0 0000000247899
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcc--ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC
Q psy1859 75 SFHQEYNTFATGGSDGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD 151 (162)
Q Consensus 75 ~~~p~~~~l~~~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 151 (162)
+|+|+|+.|++++. +.|++||+.++. ....+..+...+..+ |+|||+++++++ ++.|++||+.+++.......+.
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 99999999998876 999999998873 445566677788899 999999999887 4589999999887665544433
Q ss_pred Cc----------------eeEEEecCC
Q psy1859 152 TG----------------ITSLCFSYD 162 (162)
Q Consensus 152 ~~----------------v~~v~~~pd 162 (162)
.. +.+++|+||
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpD 219 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPD 219 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTT
T ss_pred cceeccccceeeeeccccccceEECCC
Confidence 32 478999997
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=3.6e-16 Score=105.43 Aligned_cols=139 Identities=10% Similarity=0.015 Sum_probs=97.3
Q ss_pred cccEEEEEEeeCCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-CCC
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-SDG 90 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~ 90 (162)
...+.+++|+|+++++++++.+ +.+.+|+++...+..+....+.... .+..++|+|+++.+++++ .++
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~s~dg~~l~~~~~~~~ 106 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG----------SLTHISTDHQGQFVFVGSYNAG 106 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS----------CCSEEEECTTSSEEEEEETTTT
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC----------CCcEEEEcCCCCEEEEEecCCC
Confidence 3456779999999988888776 8999988874432233333322221 478999999998766554 589
Q ss_pred eEEEEeCC---CccceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEEeCCC-ceeee----eecc-CCCceeEEEe
Q psy1859 91 YVNIWDGF---NKKRLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDGFN-KKRLC----QFHR-YDTGITSLCF 159 (162)
Q Consensus 91 ~v~~wd~~---~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~~-~~~~~----~~~~-~~~~v~~v~~ 159 (162)
.|.+||+. ..+....+.. ...+..+ |+|+++++++++ .++.|.+||+.+ ++... .+.. ....+.+++|
T Consensus 107 ~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 107 NVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp EEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE
T ss_pred eEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEE
Confidence 99999994 3334444432 3457778 999999888877 899999999987 54322 2222 3447888999
Q ss_pred cCC
Q psy1859 160 SYD 162 (162)
Q Consensus 160 ~pd 162 (162)
+||
T Consensus 186 ~pd 188 (343)
T 1ri6_A 186 HPN 188 (343)
T ss_dssp CTT
T ss_pred CCC
Confidence 986
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.71 E-value=9.3e-17 Score=118.33 Aligned_cols=135 Identities=7% Similarity=-0.021 Sum_probs=97.4
Q ss_pred EEEEEEeeCCCeEEEEcCC---------CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 16 TRCIKCFPNKQGYVLSSIE---------GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~---------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
+.+++|+|||+++++++.+ +.+.+|+.+... ...+..... |...+..++|||+|+.|+.+
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~~~~---------~~~~~~~~~~SPdG~~la~~ 131 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD--PQSLDPPEV---------SNAKLQYAGWGPKGQQLIFI 131 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC--CEECCCTTC---------CSCCCSBCCBCSSTTCEEEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc--eEeccCCcc---------ccccccccEECCCCCEEEEE
Confidence 7889999999999998765 566675544322 221211111 22247889999999999888
Q ss_pred cCCCeEEEEeCCCccceeeeeecccce------------------eEE-EcCCCCEEEEecCCC----------------
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFHRYDTGI------------------TSL-FHQEYNTFATGGSDG---------------- 131 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~~~~~~v------------------~~~-~~~~~~~l~~~~~d~---------------- 131 (162)
+. +.|++||+.+++.......+...+ ..+ |+|||++|++++.++
T Consensus 132 ~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 210 (723)
T 1xfd_A 132 FE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIY 210 (723)
T ss_dssp ET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSS
T ss_pred EC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCC
Confidence 75 799999999877655444333222 678 999999999887543
Q ss_pred ------------------eEEEEeCCCceeeeeeccC------CCceeEEEecCC
Q psy1859 132 ------------------YVNIWDGFNKKRLCQFHRY------DTGITSLCFSYD 162 (162)
Q Consensus 132 ------------------~i~iwd~~~~~~~~~~~~~------~~~v~~v~~~pd 162 (162)
.|++||+.+++....+..+ ...+.+++|+||
T Consensus 211 ~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD 265 (723)
T 1xfd_A 211 PTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS 265 (723)
T ss_dssp CCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS
T ss_pred CcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCC
Confidence 7999999888765555543 567899999997
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=4e-16 Score=102.95 Aligned_cols=136 Identities=12% Similarity=0.042 Sum_probs=101.4
Q ss_pred ccEEEEEEeeCCCeEEEEc--CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCCC
Q psy1859 14 FQTRCIKCFPNKQGYVLSS--IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSDG 90 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~--~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~ 90 (162)
..+.+++|+|+++++++++ .++...||.++.... . ...+..+. .+..++|+|+++.++ ++..++
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~--~-~~~~~~~~----------~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG--T-PRLMTKNL----------PSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC--C-CEECCSSS----------SEEEEEECTTSSEEEEEEEETT
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCC--c-eEEeecCC----------CccceEECCCCCEEEEEECCCC
Confidence 4567799999999999988 446788888886542 2 11112111 478899999998776 778899
Q ss_pred eEEEEeCCC-ccceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEEeCC-CceeeeeeccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFN-KKRLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDGF-NKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~-~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+.+|++.. ......+..+...+..+ |+|+++++++++ .++.+++|++. .+..+..+..|...+.+++|+||
T Consensus 152 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~d 227 (297)
T 2ojh_A 152 VFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPS 227 (297)
T ss_dssp EEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTT
T ss_pred ceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCC
Confidence 999998643 23445555667788899 999999887765 58899999886 45556677778888999999986
No 136
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.68 E-value=1.7e-15 Score=115.96 Aligned_cols=132 Identities=14% Similarity=0.016 Sum_probs=104.7
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEE-EEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAA-VEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.+..++|+ +++.+++++.++.+. + ++.... .. ..+..+. ..+..++|+|+|+.|++++.++.|+
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~--~d~~~~--~~-~~l~~~~---------~~~~~~~~SpDG~~la~~~~~~~v~ 403 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGI--YDYRTG--KA-EKFEENL---------GNVFAMGVDRNGKFAVVANDRFEIM 403 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEE--EETTTC--CE-EECCCCC---------CSEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEE--EECCCC--Cc-eEecCCc---------cceeeeEECCCCCEEEEECCCCeEE
Confidence 67788999 999999888765554 5 554431 11 1222232 3689999999999999999999999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCC----------eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG----------YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~----------~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+||+.+++.......+...+..+ |+|||++|++++.++ .|++||+.+++ +..+..|...+.+++|+||
T Consensus 404 ~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spd 482 (1045)
T 1k32_A 404 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDAD 482 (1045)
T ss_dssp EEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTT
T ss_pred EEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCC
Confidence 99999988777776788888899 999999998887644 89999999887 6667778888999999997
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.68 E-value=2.3e-15 Score=108.15 Aligned_cols=128 Identities=12% Similarity=0.012 Sum_probs=101.3
Q ss_pred EEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeC--
Q psy1859 20 KCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDG-- 97 (162)
Q Consensus 20 ~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~-- 97 (162)
+++|++..+++++.++.|.+|+ ..+ .+.+..+.... .+..++|+|+++++++++.|+.|.+||+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D--~~t--~~~~~~i~~g~----------~~~~v~~spdg~~l~v~~~d~~V~v~D~~~ 209 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVD--GDS--KKIVKVIDTGY----------AVHISRMSASGRYLLVIGRDARIDMIDLWA 209 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEE--TTT--CCEEEEEECST----------TEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred ccCCCCEEEEEEcCCCeEEEEE--CCC--ceEEEEEecCc----------ccceEEECCCCCEEEEECCCCeEEEEECcC
Confidence 4788888899999999999954 444 33343433211 3789999999999999999999999999
Q ss_pred CCccceeeeeecccceeEE-EcC----CCCEEEEec-CCCeEEEEeCCCceeeeeecc----------CCC-ceeEEEec
Q psy1859 98 FNKKRLCQFHRYDTGITSL-FHQ----EYNTFATGG-SDGYVNIWDGFNKKRLCQFHR----------YDT-GITSLCFS 160 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~v~~~-~~~----~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~----------~~~-~v~~v~~~ 160 (162)
.+++.+..+. ....+..+ |+| +|+++++++ .+++|.+||..+++++.++.. |.. .+.++.++
T Consensus 210 ~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 210 KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEEC
Confidence 7788777776 45567888 999 999999988 589999999999998887754 222 68888888
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
||
T Consensus 289 ~~ 290 (543)
T 1nir_A 289 HE 290 (543)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.68 E-value=8.3e-17 Score=118.60 Aligned_cols=137 Identities=7% Similarity=-0.009 Sum_probs=96.5
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC---
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD--- 89 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d--- 89 (162)
.....+++|+|+|+++++ +.||.+++|+.+ + .+....+..+.. +...|.+++|||+|++|++++.+
T Consensus 16 ~~~~~~~~~spdg~~~~~-~~dg~i~~~d~~--~--g~~~~~~~~~~~------~~~~v~~~~~SpDg~~l~~~~~~~~~ 84 (723)
T 1xfd_A 16 KIHDPEAKWISDTEFIYR-EQKGTVRLWNVE--T--NTSTVLIEGKKI------ESLRAIRYEISPDREYALFSYNVEPI 84 (723)
T ss_dssp CCCCCCCCBSSSSCBCCC-CSSSCEEEBCGG--G--CCCEEEECTTTT------TTTTCSEEEECTTSSEEEEEESCCCC
T ss_pred cccccccEEcCCCcEEEE-eCCCCEEEEECC--C--CcEEEEeccccc------cccccceEEECCCCCEEEEEecCccc
Confidence 344567899999997665 788999885444 3 222222222221 00138899999999999988764
Q ss_pred ------CeEEEEeCCCccceeeee---ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCce-----
Q psy1859 90 ------GYVNIWDGFNKKRLCQFH---RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGI----- 154 (162)
Q Consensus 90 ------~~v~~wd~~~~~~~~~~~---~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v----- 154 (162)
+.+++||+.+++. ..+. .+...+..+ |||||++|+.++. +.|++||+.+++.......+...+
T Consensus 85 ~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~ 162 (723)
T 1xfd_A 85 YQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGL 162 (723)
T ss_dssp SSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEE
T ss_pred eeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcc
Confidence 7889999998765 3332 333447788 9999999999876 799999999887766555443333
Q ss_pred -------------eEEEecCC
Q psy1859 155 -------------TSLCFSYD 162 (162)
Q Consensus 155 -------------~~v~~~pd 162 (162)
.+++|+||
T Consensus 163 ~~~v~~ee~~~~~~~~~~SpD 183 (723)
T 1xfd_A 163 SDWLYEEEILKTHIAHWWSPD 183 (723)
T ss_dssp CCHHHHHTTSSSSEEEEECTT
T ss_pred cceeEEEEeccCcceEEECCC
Confidence 78999997
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.67 E-value=1.2e-14 Score=98.50 Aligned_cols=144 Identities=14% Similarity=0.073 Sum_probs=101.5
Q ss_pred cEEEEEEeeCCCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec--CCCe
Q psy1859 15 QTRCIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG--SDGY 91 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~--~d~~ 91 (162)
....++++|+++++++ ...++.+.+| |..+ .+....+..+............+.+++|+|+++.+++++ .++.
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~--d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 165 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAI--DAKT--GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESV 165 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEE--ETTT--CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEE--eCCC--CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCce
Confidence 3456889999986555 4556888885 4444 223233222211000000011268899999998766655 5789
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc----CCCceeEEEecCC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR----YDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~v~~~pd 162 (162)
|.+||..+++.+..+..+...+..+ |+|+++++++++.++.|.+||+.+++.+..+.. +...+.+++|+||
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 241 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA 241 (353)
T ss_dssp EEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT
T ss_pred EEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC
Confidence 9999999988887776555667788 999999999999999999999999988777653 4556788999986
No 140
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=1.5e-14 Score=98.61 Aligned_cols=140 Identities=9% Similarity=0.001 Sum_probs=93.3
Q ss_pred ccEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcc----c-ceee---eeeeeeeeccCcccceeceEEEEecCCCCEEE
Q psy1859 14 FQTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPE----M-QKMK---YAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA 84 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~----~-~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~ 84 (162)
.++.+++|+|++++++++ ..++.+.+|+++.... . .... ...... +...+..++|+|++++++
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~spdg~~l~ 226 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA--------PGSGPRHLIFNSDGKFAY 226 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC--------TTCCEEEEEECTTSSEEE
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC--------CCCCCeEEEEcCCCCEEE
Confidence 355789999999976655 4578899988876542 1 0000 011111 112477899999998776
Q ss_pred Eec-CCCeEEEEeCCCccc--eeeee---ecccceeEE-EcCCCCEEEEecC--CCeEEEEeCC--Cce--eeeeeccCC
Q psy1859 85 TGG-SDGYVNIWDGFNKKR--LCQFH---RYDTGITSL-FHQEYNTFATGGS--DGYVNIWDGF--NKK--RLCQFHRYD 151 (162)
Q Consensus 85 ~~~-~d~~v~~wd~~~~~~--~~~~~---~~~~~v~~~-~~~~~~~l~~~~~--d~~i~iwd~~--~~~--~~~~~~~~~ 151 (162)
+++ .++.|.+|++.+++. +..+. .+......+ |+|||++|+++.. ++.|.+|++. +++ .+..+.. .
T Consensus 227 v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g 305 (361)
T 3scy_A 227 LINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-G 305 (361)
T ss_dssp EEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-S
T ss_pred EEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-C
Confidence 655 689999999986643 22222 222345688 9999999877665 4899999985 344 3444444 4
Q ss_pred CceeEEEecCC
Q psy1859 152 TGITSLCFSYD 162 (162)
Q Consensus 152 ~~v~~v~~~pd 162 (162)
..+.+++|+||
T Consensus 306 ~~~~~~~~spd 316 (361)
T 3scy_A 306 IHPRNFIITPN 316 (361)
T ss_dssp SCCCEEEECTT
T ss_pred CCCceEEECCC
Confidence 57889999987
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=2.6e-14 Score=96.78 Aligned_cols=137 Identities=13% Similarity=0.045 Sum_probs=101.1
Q ss_pred ccccEEEEEEeeCCCeEEEEcC-------CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCC-EE
Q psy1859 12 LKFQTRCIKCFPNKQGYVLSSI-------EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN-TF 83 (162)
Q Consensus 12 ~~~~~~~i~~~~~~~~l~~~~~-------~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l 83 (162)
+......++++|+++++++++. ++.+.+ ||..+ .+....+.... .+..++|+|+++ ++
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~--~d~~~--~~~~~~~~~~~----------~~~~~~~s~dg~~l~ 104 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYR--LDPVT--LEVTQAIHNDL----------KPFGATINNTTQTLW 104 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEE--ECTTT--CCEEEEEEESS----------CCCSEEEETTTTEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEE--EcCCC--CeEEEEEecCC----------CcceEEECCCCCEEE
Confidence 3455678999999998887764 345666 66554 33333333221 367899999997 55
Q ss_pred EEecCCCeEEEEeCCCccceeeeeeccc---------ceeEE-EcCCCCEEEEec--CCCeEEEEeCCCceeeeeeccCC
Q psy1859 84 ATGGSDGYVNIWDGFNKKRLCQFHRYDT---------GITSL-FHQEYNTFATGG--SDGYVNIWDGFNKKRLCQFHRYD 151 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~~~~~~~~~~~~~---------~v~~~-~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~ 151 (162)
++...++.|.+||..+++.+..+..+.. .+..+ |+|+++++++++ .++.|.+||..+++.+..+..+.
T Consensus 105 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 184 (353)
T 3vgz_A 105 FGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG 184 (353)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCC
T ss_pred EEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCC
Confidence 5666789999999999888777765332 25778 999999877776 47899999999999888877566
Q ss_pred CceeEEEecCC
Q psy1859 152 TGITSLCFSYD 162 (162)
Q Consensus 152 ~~v~~v~~~pd 162 (162)
..+.+++|+||
T Consensus 185 ~~~~~~~~s~d 195 (353)
T 3vgz_A 185 KMSTGLALDSE 195 (353)
T ss_dssp TTCCCCEEETT
T ss_pred CccceEEECCC
Confidence 66888999886
No 142
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=2.9e-16 Score=115.81 Aligned_cols=132 Identities=12% Similarity=0.019 Sum_probs=93.6
Q ss_pred EEEEEEeeCCCeEEEEcC---------CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 16 TRCIKCFPNKQGYVLSSI---------EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~---------~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
+.+++|||||++|++++. ++.+.+|+.+..+ ......+. ..+..++|||+|+.|+.+
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~--~~~~~~l~------------~~~~~~~~SPDG~~la~~ 127 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGE--FVRGNELP------------RPIQYLCWSPVGSKLAYV 127 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE--ECCSSCCC------------SSBCCEEECSSTTCEEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCc--cccceecC------------cccccceECCCCCEEEEE
Confidence 778999999999998876 5777775544322 20001111 147889999999998888
Q ss_pred cCCCeEEEEeCCCccceeeee-ecccce-----------------eEE-EcCCCCEEEEecCCC----------------
Q psy1859 87 GSDGYVNIWDGFNKKRLCQFH-RYDTGI-----------------TSL-FHQEYNTFATGGSDG---------------- 131 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~~~~~-~~~~~v-----------------~~~-~~~~~~~l~~~~~d~---------------- 131 (162)
. ++.|++||+.+++...... ++...+ ..+ |+|||++|++++.|.
T Consensus 128 ~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~ 206 (719)
T 1z68_A 128 Y-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQY 206 (719)
T ss_dssp E-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSS
T ss_pred E-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 5 7899999998876543321 221111 467 999999999987552
Q ss_pred ------------------eEEEEeCCCceee--------eeeccCCCceeEEEecCC
Q psy1859 132 ------------------YVNIWDGFNKKRL--------CQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 132 ------------------~i~iwd~~~~~~~--------~~~~~~~~~v~~v~~~pd 162 (162)
.|++||+.+++.. ..+..|...+.+++|+||
T Consensus 207 ~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD 263 (719)
T 1z68_A 207 PRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD 263 (719)
T ss_dssp CEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS
T ss_pred ccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC
Confidence 7899999887642 123357778999999997
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.65 E-value=3.4e-14 Score=102.10 Aligned_cols=134 Identities=9% Similarity=-0.026 Sum_probs=101.5
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC----CCCEEEEec-CCC
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ----EYNTFATGG-SDG 90 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p----~~~~l~~~~-~d~ 90 (162)
+..++++|+++++++++.++.|.+|+.+..+ .+.+..+.... .+..++|+| +++++++++ .++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t--~~~~~~i~~g~----------~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKE--PTKVAEIKIGI----------EARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSS--CEEEEEEECCS----------EEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCC--CcEEEEEecCC----------CcceEEeCCCcCCCCCEEEEEEccCC
Confidence 6789999999999999999999997663233 33444443222 478999999 999888887 589
Q ss_pred eEEEEeCCCccceeeeeec-----------ccceeEE-EcCCCC-EEEEecCCCeEEEEeCCCceeee--eeccCCCcee
Q psy1859 91 YVNIWDGFNKKRLCQFHRY-----------DTGITSL-FHQEYN-TFATGGSDGYVNIWDGFNKKRLC--QFHRYDTGIT 155 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~-----------~~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~v~ 155 (162)
.|.+||..+++++..+... ...+..+ ++|++. ++++...++.|.+||+.+.+.+. .+ .+...+.
T Consensus 249 ~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~ 327 (543)
T 1nir_A 249 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLH 327 (543)
T ss_dssp EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCC
T ss_pred eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCcc
Confidence 9999999998888877542 2257788 999766 45666788999999998765433 33 3556788
Q ss_pred EEEecCC
Q psy1859 156 SLCFSYD 162 (162)
Q Consensus 156 ~v~~~pd 162 (162)
++.|+||
T Consensus 328 ~~~~spd 334 (543)
T 1nir_A 328 DGGWDSS 334 (543)
T ss_dssp CEEECTT
T ss_pred CceECCC
Confidence 8999886
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.64 E-value=5.4e-14 Score=95.37 Aligned_cols=139 Identities=6% Similarity=-0.030 Sum_probs=93.0
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE-EEecCCCeEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-ATGGSDGYVN 93 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d~~v~ 93 (162)
++.+++|+|+++.+++...++.+.+|+++... .......+..... ..+..++|+|+|+++ ++...++.+.
T Consensus 142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g-~~~~~~~~~~~~g--------~~p~~~~~spdg~~l~v~~~~~~~v~ 212 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG-QLSEQSVLTMEAG--------FGPRHLVFSPDGQYAFLAGELSSQIA 212 (347)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEEECTTS-CEEEEEEEECCTT--------CCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CceEEEECCCCcEEEEeCCCCEEEEEEECCCC-cEEEeeeEEcCCC--------CCCceEEECCCCCEEEEEeCCCCEEE
Confidence 47789999999966666678889997776321 1121111111111 146789999999854 4567789999
Q ss_pred EEeCCC--ccc--eeeeeecc------cceeEE-EcCCCCEEEE-ecCCCeEEEEeCCC---ceeeeeeccCCCceeEEE
Q psy1859 94 IWDGFN--KKR--LCQFHRYD------TGITSL-FHQEYNTFAT-GGSDGYVNIWDGFN---KKRLCQFHRYDTGITSLC 158 (162)
Q Consensus 94 ~wd~~~--~~~--~~~~~~~~------~~v~~~-~~~~~~~l~~-~~~d~~i~iwd~~~---~~~~~~~~~~~~~v~~v~ 158 (162)
+|++.. ++. +..+.... ..+..+ |+|+|++|++ ...++.|.+|++.. .+.+..+..+...+.+++
T Consensus 213 v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 292 (347)
T 3hfq_A 213 SLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFD 292 (347)
T ss_dssp EEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEE
T ss_pred EEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEE
Confidence 999874 332 22222211 346778 9999998754 55689999999972 245555666666789999
Q ss_pred ecCC
Q psy1859 159 FSYD 162 (162)
Q Consensus 159 ~~pd 162 (162)
|+||
T Consensus 293 ~spd 296 (347)
T 3hfq_A 293 LDPT 296 (347)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9997
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.64 E-value=5.7e-14 Score=95.79 Aligned_cols=139 Identities=9% Similarity=-0.036 Sum_probs=93.7
Q ss_pred cccEEEEEEeeCCCeEEEEc-CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC--C
Q psy1859 13 KFQTRCIKCFPNKQGYVLSS-IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS--D 89 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~-~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--d 89 (162)
......++|+|+++++++++ .++.|.+|+++... ......+..... +......++|+|++++|+++.. +
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~--~~~~~~~~~~~~------~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM--LDEIQTVAADTV------NAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE--EEEEEEEESCSS------CCCCEEEEEECTTSSEEEEEECSSS
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc--eEEeEEEecCCC------CCCCcccEEECCCCCEEEEECCCCC
Confidence 34567899999999877766 68999998776322 222222211111 1124679999999988766554 5
Q ss_pred CeEEEEeCC--Ccc--ceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEE--eCCCceeeeee-ccCCCceeEEEec
Q psy1859 90 GYVNIWDGF--NKK--RLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIW--DGFNKKRLCQF-HRYDTGITSLCFS 160 (162)
Q Consensus 90 ~~v~~wd~~--~~~--~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iw--d~~~~~~~~~~-~~~~~~v~~v~~~ 160 (162)
+.|.+|++. +++ .+..+.. ...+..+ |+|+|++|++++ .++.|.+| |..+++..... ..+...+.||.|.
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 899999986 343 3334443 4567888 999999888887 67899995 55567654433 2244578999986
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.63 E-value=2.6e-15 Score=111.02 Aligned_cols=133 Identities=8% Similarity=-0.051 Sum_probs=95.2
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+.+++|+|||++|++++. +.+.+|+.+... ......+..+. ..+..++|+|+|+.|+.++ ++.|++|
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~--~~~~~~l~~~~---------~~~~~~~~SPDG~~la~~~-~~~i~~~ 177 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEG--KAAVRQLTHGE---------GFATDAKLSPKGGFVSFIR-GRNLWVI 177 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCS--TTSCCBCCCSS---------SCEEEEEECTTSSEEEEEE-TTEEEEE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCC--cceEEEcccCC---------cccccccCCCCCCEEEEEe-CCcEEEE
Confidence 577899999999999876 888886554320 00122222232 2689999999999998887 4689999
Q ss_pred eCCCccceeeeeecccc----------------eeEE-EcCCCCEEEEecCCC---------------------------
Q psy1859 96 DGFNKKRLCQFHRYDTG----------------ITSL-FHQEYNTFATGGSDG--------------------------- 131 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~~----------------v~~~-~~~~~~~l~~~~~d~--------------------------- 131 (162)
|+.+++.......+... +..+ |+|||++|++++.|+
T Consensus 178 d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g 257 (741)
T 2ecf_A 178 DLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAG 257 (741)
T ss_dssp ETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTT
T ss_pred ecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCC
Confidence 99987655443332221 3667 999999999987665
Q ss_pred ------eEEEEeCCC-ceeeeeec--cCCCceeEEEecCC
Q psy1859 132 ------YVNIWDGFN-KKRLCQFH--RYDTGITSLCFSYD 162 (162)
Q Consensus 132 ------~i~iwd~~~-~~~~~~~~--~~~~~v~~v~~~pd 162 (162)
.|.+||+.+ ++...... .|...+.+++| ||
T Consensus 258 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pD 296 (741)
T 2ecf_A 258 DANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RD 296 (741)
T ss_dssp SCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EE
T ss_pred CCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CC
Confidence 889999988 76544332 46778899999 86
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.62 E-value=6.6e-15 Score=112.69 Aligned_cols=132 Identities=12% Similarity=-0.030 Sum_probs=103.2
Q ss_pred cEEEEEEe-eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 15 QTRCIKCF-PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 15 ~~~~i~~~-~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.+..++|+ |+|+.+++++ ++.+.+| +....... .+..+.. ..+..++|+ +++.++.++.+..+.
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~--~~~~~~~~---~~~~~~~--------~~~~~~~~s-dg~~l~~~s~~~~l~ 361 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQ--DVSGTYVL---KVPEPLR--------IRYVRRGGD-TKVAFIHGTREGDFL 361 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEE--CTTSSBEE---ECSCCSC--------EEEEEECSS-SEEEEEEEETTEEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEE--cCCCCceE---EccCCCc--------ceEEeeeEc-CCCeEEEEECCCceE
Confidence 57789999 9999998887 6777774 44331111 1222211 158899999 998888888888898
Q ss_pred -EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 94 -IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 -~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+||+..++... +..+...+..+ |+|||++|++++.++.|++||+.+++....+..|...+.+++|+||
T Consensus 362 ~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 362 GIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp EEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred EEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence 99998765433 33666788889 9999999999999999999999999887777788889999999997
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.62 E-value=5.4e-15 Score=108.85 Aligned_cols=132 Identities=12% Similarity=-0.047 Sum_probs=94.6
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+.+++|+|+ +.++.+ .++.+.+|+.+... .. .+..+. ..+.+++|+|+|+.|+.+ .++.|+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~--~~---~l~~~~---------~~~~~~~~SpdG~~la~~-~~~~i~ 144 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARK--VT---YLFDTN---------EETASLDFSPVGDRVAYV-RNHNLY 144 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTE--EE---EEECCT---------TCCTTCEECTTSSEEEEE-ETTEEE
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCc--eE---EccCCc---------ccccCCcCCCCCCEEEEE-ECCeEE
Confidence 35789999999 666665 35888886554321 21 112221 257889999999998885 689999
Q ss_pred EEeCCC-----ccceeeeeecccc--------------eeEE-EcCCCCEEEEec-------------------------
Q psy1859 94 IWDGFN-----KKRLCQFHRYDTG--------------ITSL-FHQEYNTFATGG------------------------- 128 (162)
Q Consensus 94 ~wd~~~-----~~~~~~~~~~~~~--------------v~~~-~~~~~~~l~~~~------------------------- 128 (162)
+||+.+ ++........... +..+ |+|||++|++++
T Consensus 145 v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 224 (706)
T 2z3z_A 145 IARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLY 224 (706)
T ss_dssp EEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEEC
T ss_pred EEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEee
Confidence 999998 7655443333232 4678 999999999987
Q ss_pred --------CCCeEEEEeCCCceeeeeec--cCCCceeEEEecCC
Q psy1859 129 --------SDGYVNIWDGFNKKRLCQFH--RYDTGITSLCFSYD 162 (162)
Q Consensus 129 --------~d~~i~iwd~~~~~~~~~~~--~~~~~v~~v~~~pd 162 (162)
.+..|++||+.+++...... .|...+.+++|+||
T Consensus 225 y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 268 (706)
T 2z3z_A 225 YPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD 268 (706)
T ss_dssp CCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT
T ss_pred CCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC
Confidence 44689999999887654432 46678999999997
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=6.3e-14 Score=95.08 Aligned_cols=136 Identities=10% Similarity=0.011 Sum_probs=89.7
Q ss_pred cEEEEEEeeCCCeEEEEcC---CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-CCC
Q psy1859 15 QTRCIKCFPNKQGYVLSSI---EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-SDG 90 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~---~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~ 90 (162)
....++|+|+++ +++++. ++.|.+|+++... .+.+..+..+.. .+..++|+|++++|++++ .++
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~--~~~~~~~~~~~~---------~p~~~a~spdg~~l~~~~~~~~ 108 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT--AHKLNTVVAPGT---------PPAYVAVDEARQLVYSANYHKG 108 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE--EEEEEEEEEESC---------CCSEEEEETTTTEEEEEETTTT
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCCc--EEEeeeeecCCC---------CCEEEEECCCCCEEEEEeCCCC
Confidence 345689999999 555543 5788887775432 333333222222 578999999998777776 789
Q ss_pred eEEEEeCCC-c--cceeeeeec---------ccceeEE-EcCCCCEEEEecCCCeEEEEeCC-Cceee--eeeccC-CCc
Q psy1859 91 YVNIWDGFN-K--KRLCQFHRY---------DTGITSL-FHQEYNTFATGGSDGYVNIWDGF-NKKRL--CQFHRY-DTG 153 (162)
Q Consensus 91 ~v~~wd~~~-~--~~~~~~~~~---------~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~-~~~~~--~~~~~~-~~~ 153 (162)
.+.+|++.. + +.+..+... ...+..+ |+|+|+++++...++.|.+|++. +++.. ..+..+ ...
T Consensus 109 ~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~ 188 (347)
T 3hfq_A 109 TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFG 188 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCC
T ss_pred EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCC
Confidence 999999963 2 223332211 1236778 99999976777778999999998 45432 222222 336
Q ss_pred eeEEEecCC
Q psy1859 154 ITSLCFSYD 162 (162)
Q Consensus 154 v~~v~~~pd 162 (162)
+..++|+||
T Consensus 189 p~~~~~spd 197 (347)
T 3hfq_A 189 PRHLVFSPD 197 (347)
T ss_dssp EEEEEECTT
T ss_pred CceEEECCC
Confidence 788999987
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.61 E-value=5.2e-15 Score=108.91 Aligned_cols=138 Identities=11% Similarity=0.077 Sum_probs=95.7
Q ss_pred EEEEEEeeCCCeEEEEcCC-------------------------------CcEEEEEecCCcccceeeeeeeeeeeccCc
Q psy1859 16 TRCIKCFPNKQGYVLSSIE-------------------------------GRAAVEYLDTGPEMQKMKYAFKCHRIKEDG 64 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~-------------------------------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (162)
+.+++|+|||++|++++.| +...||.||..++.........
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~-------- 254 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE-------- 254 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS--------
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC--------
Confidence 4789999999999998722 3334444555442222221101
Q ss_pred ccceeceEEEEecCCCCEEEEecCCC-----eEEEEeCCCccceeeee-e-ccc---ceeEE-EcC--CCCEEEEecCCC
Q psy1859 65 IEKIYPVNAISFHQEYNTFATGGSDG-----YVNIWDGFNKKRLCQFH-R-YDT---GITSL-FHQ--EYNTFATGGSDG 131 (162)
Q Consensus 65 ~~~~~~v~~~~~~p~~~~l~~~~~d~-----~v~~wd~~~~~~~~~~~-~-~~~---~v~~~-~~~--~~~~l~~~~~d~ 131 (162)
.|...+..++|+|+++.|++++.++ .|++||+.+++....+. . ... .+..+ |+| +|++++++..|+
T Consensus 255 -~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g 333 (706)
T 2z3z_A 255 -PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG 333 (706)
T ss_dssp -CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS
T ss_pred -CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC
Confidence 1333689999999999888877665 89999999884333332 2 222 23567 999 999999999999
Q ss_pred eEEEEeCC-CceeeeeeccCCCceeE-EEecCC
Q psy1859 132 YVNIWDGF-NKKRLCQFHRYDTGITS-LCFSYD 162 (162)
Q Consensus 132 ~i~iwd~~-~~~~~~~~~~~~~~v~~-v~~~pd 162 (162)
.+++|++. +++.+..+..+...+.+ ++|+||
T Consensus 334 ~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spd 366 (706)
T 2z3z_A 334 WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPK 366 (706)
T ss_dssp SCEEEEEETTSCEEEECCCSSSCEEEEEEECTT
T ss_pred ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCC
Confidence 99999875 56667777777777877 799986
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.61 E-value=1.7e-13 Score=92.38 Aligned_cols=144 Identities=7% Similarity=0.006 Sum_probs=93.4
Q ss_pred ccEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-EecCCCe
Q psy1859 14 FQTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-TGGSDGY 91 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~~ 91 (162)
..+..++|+|++++++++ ..++.+.+|+++...+............ .+......+..++|+|+++.++ +...++.
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~ 254 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP---ENFSDTRWAADIHITPDGRHLYACDRTASL 254 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC---TTCCSCCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccC---ccccccCCccceEECCCCCEEEEEecCCCE
Confidence 356789999999977655 5789999988765332122111111100 0001122467899999997666 5568999
Q ss_pred EEEEeCCC----ccceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEE--eCCCcee--eeeeccCCCceeEEEecC
Q psy1859 92 VNIWDGFN----KKRLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIW--DGFNKKR--LCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 92 v~~wd~~~----~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iw--d~~~~~~--~~~~~~~~~~v~~v~~~p 161 (162)
|.+||+.. .+.+..+..+.. +..+ |+|+|+++++++ .++.|.+| |..+++. +..+.. .....+++|.|
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~ 332 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNA 332 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEE
T ss_pred EEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEc
Confidence 99999983 234444444333 7788 999999888887 67999999 5556643 444443 24567788876
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
+
T Consensus 333 ~ 333 (343)
T 1ri6_A 333 H 333 (343)
T ss_dssp E
T ss_pred c
Confidence 3
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.61 E-value=1.1e-13 Score=93.07 Aligned_cols=128 Identities=5% Similarity=-0.067 Sum_probs=90.0
Q ss_pred EEeeCCCe-EEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe-cCCCeEEEEeC
Q psy1859 20 KCFPNKQG-YVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG-GSDGYVNIWDG 97 (162)
Q Consensus 20 ~~~~~~~~-l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~v~~wd~ 97 (162)
.|.+++++ +++.+.++.|.+|+.+ + .+....+..+.. .+ .++|+|+++.++++ ..++.|.+||+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~--~--~~~~~~~~~~~~---------~~-~~~~s~dg~~l~~~~~~~~~i~~~d~ 69 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTD--T--LEILNQITLGYD---------FV-DTAITSDCSNVVVTSDFCQTLVQIET 69 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETT--T--CCEEEEEECCCC---------EE-EEEECSSSCEEEEEESTTCEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCc--c--cceeeeEEccCC---------cc-eEEEcCCCCEEEEEeCCCCeEEEEEC
Confidence 34555444 6777888999995544 3 222222222221 35 99999999855555 45899999999
Q ss_pred CCccc-eeeeeecccceeEE-EcCCCCEEEEecCCC---eEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 98 FNKKR-LCQFHRYDTGITSL-FHQEYNTFATGGSDG---YVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 98 ~~~~~-~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
.+++. ...+..+..+...+ |+|+|++++++..++ .|.+||+.+++.+..+..+ ..+.+++|+||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spd 138 (331)
T 3u4y_A 70 QLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPN 138 (331)
T ss_dssp SSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTT
T ss_pred CCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCC
Confidence 99887 66666665555548 999999999665553 8999999999988877643 45789999997
No 153
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.60 E-value=1.2e-13 Score=92.89 Aligned_cols=132 Identities=11% Similarity=-0.026 Sum_probs=88.6
Q ss_pred EEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC---eEE
Q psy1859 18 CIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG---YVN 93 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~---~v~ 93 (162)
.++++|+++++++++. ++.+.+|+.+... . ....+..+.. +..+++|+|++++++++..++ .|.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~--~-~~~~~~~~~~---------~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEP--P-KVVAIQEGQS---------SMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSS--C-EEEEEEECSS---------CCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCc--e-eEEecccCCC---------CccceEECCCCCEEEEecCCCCcccEE
Confidence 8999999997766655 7778775443322 2 0222222221 344499999999888655553 999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEe-cCCCe-EEEEeCCCceee----eeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATG-GSDGY-VNIWDGFNKKRL----CQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~-~~d~~-i~iwd~~~~~~~----~~~~~~~~~v~~v~~~pd 162 (162)
+||+.+++.+..+.. ......+ |+|+|++++++ ..++. |.+|++.....+ .........+.+++|+||
T Consensus 112 v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spd 186 (331)
T 3u4y_A 112 SYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPD 186 (331)
T ss_dssp EEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTT
T ss_pred EEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCC
Confidence 999999888777654 3445788 99999866555 45577 999998753322 111233456789999986
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.59 E-value=1.8e-14 Score=104.06 Aligned_cols=128 Identities=13% Similarity=-0.033 Sum_probs=94.2
Q ss_pred EEEEEeeCCCeE-EEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC----Ce
Q psy1859 17 RCIKCFPNKQGY-VLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD----GY 91 (162)
Q Consensus 17 ~~i~~~~~~~~l-~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d----~~ 91 (162)
...+|+|+++.+ ++.+.++.+.+|+.+... .+.+ ..+ +..+++|+|+|+.+++++.+ ..
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~--~~~l---~~~-----------~~~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDRVALYALDGGG--LREL---ARL-----------PGFGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSCEEEEEEETTE--EEEE---EEE-----------SSCEEEEEEETTEEEEEEEEETTEEE
T ss_pred eeeeeCCCCCeEEEEecCCCCceEEEccCCc--EEEe---ecC-----------CCceEEECCCCCEEEEEEEcCCCCeE
Confidence 467899988643 333444555587655322 2221 111 12689999999999987776 78
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCC--eEEEEeCCCceeeeeeccCCCceeEEE--------ec
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDG--YVNIWDGFNKKRLCQFHRYDTGITSLC--------FS 160 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~v~--------~~ 160 (162)
|++||+.+++.. .+..+...+..+ |+|||++|+++..++ .|++||+.+++.. .+..|...+.+++ |+
T Consensus 177 i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s 254 (582)
T 3o4h_A 177 LFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYL 254 (582)
T ss_dssp EEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEEC
T ss_pred EEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEc
Confidence 999999887654 556677778888 999999999888888 8999999988877 6777777777777 99
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
||
T Consensus 255 pd 256 (582)
T 3o4h_A 255 PD 256 (582)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=107.13 Aligned_cols=131 Identities=10% Similarity=0.036 Sum_probs=90.5
Q ss_pred EEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC--------
Q psy1859 17 RCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS-------- 88 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-------- 88 (162)
..++|+|++++ +..+.++.+.+|+.+..+ .... +..+... ...+.+++|||+|++|+.++.
T Consensus 19 ~~~~~s~dg~~-~~~~~d~~i~~~~~~~g~--~~~~--~~~~~~~------~~~~~~~~~SpDg~~la~~~~~~~~~~~s 87 (719)
T 1z68_A 19 FFPNWISGQEY-LHQSADNNIVLYNIETGQ--SYTI--LSNRTMK------SVNASNYGLSPDRQFVYLESDYSKLWRYS 87 (719)
T ss_dssp CCCEESSSSEE-EEECTTSCEEEEESSSCC--EEEE--ECHHHHH------TTTCSEEEECTTSSEEEEEEEEEECSSSC
T ss_pred CccEECCCCeE-EEEcCCCCEEEEEcCCCc--EEEE--Ecccccc------ccceeeEEECCCCCeEEEEecCceeEEee
Confidence 46889999964 444568999996554432 2222 2222110 002889999999999988876
Q ss_pred -CCeEEEEeCCCccce--eeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee-ccCCCce---------
Q psy1859 89 -DGYVNIWDGFNKKRL--CQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF-HRYDTGI--------- 154 (162)
Q Consensus 89 -d~~v~~wd~~~~~~~--~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v--------- 154 (162)
++.|++||+.+++.+ ..+ ...+..+ |||||+.|+.+. ++.|++||+.+++..... .++...|
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 88 YTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp EEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred cceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence 789999999988763 222 2457778 999999999885 789999999888765432 2222222
Q ss_pred --------eEEEecCC
Q psy1859 155 --------TSLCFSYD 162 (162)
Q Consensus 155 --------~~v~~~pd 162 (162)
.+++||||
T Consensus 164 ~ee~~~~~~~~~wSPD 179 (719)
T 1z68_A 164 EEEMLATKYALWWSPN 179 (719)
T ss_dssp HHHTTCSSCCEEECTT
T ss_pred eeecccCcccEEECCC
Confidence 48999997
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.57 E-value=3.1e-14 Score=96.24 Aligned_cols=131 Identities=6% Similarity=-0.017 Sum_probs=93.0
Q ss_pred EEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCE-EEEecCCCeEEEEeC
Q psy1859 19 IKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNT-FATGGSDGYVNIWDG 97 (162)
Q Consensus 19 i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~~~~~d~~v~~wd~ 97 (162)
++++++++.+++++.++.|.+|+. .+ .+....+..... ..+..++|+|+++. +++...++.|.+||+
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~--~~--~~~~~~~~~~~~--------~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDV--AS--DTVYKSCVMPDK--------FGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEET--TT--TEEEEEEECSSC--------CSSCEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ccccCCCEEEEEeCCCCeEEEEEC--CC--CcEEEEEecCCC--------CCCceeEECCCCCEEEEEeCCCCcEEEEeC
Confidence 456778888999999999999554 33 233333332210 13678999999975 456667899999999
Q ss_pred CCccceeeeeec------ccceeEE-EcCCCCEEEEecCC------------CeEEEEeCCCcee---eeeeccCCCcee
Q psy1859 98 FNKKRLCQFHRY------DTGITSL-FHQEYNTFATGGSD------------GYVNIWDGFNKKR---LCQFHRYDTGIT 155 (162)
Q Consensus 98 ~~~~~~~~~~~~------~~~v~~~-~~~~~~~l~~~~~d------------~~i~iwd~~~~~~---~~~~~~~~~~v~ 155 (162)
.+++....+... ...+..+ |+|+|+++++++.+ +.|.+||+.+++. +..+. +...+.
T Consensus 73 ~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~ 151 (349)
T 1jmx_B 73 DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVY 151 (349)
T ss_dssp TTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCC
T ss_pred CCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCccc
Confidence 988877666532 2236778 99999999998865 8999999987543 33333 334688
Q ss_pred EEEecCC
Q psy1859 156 SLCFSYD 162 (162)
Q Consensus 156 ~v~~~pd 162 (162)
+++|+||
T Consensus 152 ~~~~s~d 158 (349)
T 1jmx_B 152 LMRAADD 158 (349)
T ss_dssp CEEECTT
T ss_pred ceeECCC
Confidence 8999986
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.57 E-value=5.4e-14 Score=101.58 Aligned_cols=124 Identities=7% Similarity=-0.092 Sum_probs=90.1
Q ss_pred EEEEEeeCCCeEEEEcCC----CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC--
Q psy1859 17 RCIKCFPNKQGYVLSSIE----GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG-- 90 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~-- 90 (162)
.+++|+|||+++++++.+ +.|.+ +|..++..+ .+..+. ..+..++|+|+|+.|+++..++
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~--~d~~~g~~~---~l~~~~---------~~~~~~~~SpDG~~l~~~~~~~~~ 218 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFT--SNLSSGGLR---VFDSGE---------GSFSSASISPGMKVTAGLETAREA 218 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEE--EETTTCCCE---EECCSS---------CEEEEEEECTTSCEEEEEECSSCE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEE--EcCCCCCce---EeecCC---------CccccceECCCCCEEEEccCCCee
Confidence 678899999999987766 44555 665442222 223332 2589999999999999888888
Q ss_pred eEEEEeCCCccceeeeeecccc--------eeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTG--------ITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~--------v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
.|++||+.+++.. .+..+... .... |+|||.++++++.++.+++|++ ++... .+.+.+.+++|+
T Consensus 219 ~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s 291 (582)
T 3o4h_A 219 RLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW 291 (582)
T ss_dssp EEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE
T ss_pred EEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec
Confidence 8999999987765 44444322 1233 8999999999999999999999 66554 234567888887
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.54 E-value=1.9e-13 Score=93.90 Aligned_cols=132 Identities=5% Similarity=-0.146 Sum_probs=94.7
Q ss_pred EEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeC
Q psy1859 19 IKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDG 97 (162)
Q Consensus 19 i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~ 97 (162)
.+|+|||++|+.++. ++...||.++...+ +.......+.. .+..++|+|+++.|+.++.++.+++||+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g--~~~~lt~~~~~---------~~~~~~~spdg~~l~~~~~~~~l~~~d~ 109 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ--VATQLTEGRGD---------NTFGGFLSPDDDALFYVKDGRNLMRVDL 109 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTC--EEEECCCSSCB---------CSSSCEECTTSSEEEEEETTTEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCC--ceEEeeeCCCC---------CccceEEcCCCCEEEEEeCCCeEEEEEC
Confidence 679999999998877 78767777877652 22222122221 3446789999999999999999999999
Q ss_pred CCccceeeeeecccceeEE---EcCCCCEEEEe----------------------cCCCeEEEEeCCCceeeeeeccCCC
Q psy1859 98 FNKKRLCQFHRYDTGITSL---FHQEYNTFATG----------------------GSDGYVNIWDGFNKKRLCQFHRYDT 152 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~v~~~---~~~~~~~l~~~----------------------~~d~~i~iwd~~~~~~~~~~~~~~~ 152 (162)
.+++.......+...+... ++|++++++.. ..+..|.+||+.+++... +..+..
T Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~ 188 (388)
T 3pe7_A 110 ATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQ 188 (388)
T ss_dssp TTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESS
T ss_pred CCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCc
Confidence 9887665555454444333 58999988742 244689999999886543 445666
Q ss_pred ceeEEEecC-C
Q psy1859 153 GITSLCFSY-D 162 (162)
Q Consensus 153 ~v~~v~~~p-d 162 (162)
.+..++|+| |
T Consensus 189 ~~~~~~~sp~d 199 (388)
T 3pe7_A 189 WLGHPIYRPYD 199 (388)
T ss_dssp CEEEEEEETTE
T ss_pred cccccEECCCC
Confidence 789999999 5
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.53 E-value=2.9e-13 Score=90.97 Aligned_cols=124 Identities=12% Similarity=0.007 Sum_probs=90.0
Q ss_pred CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCccccee-ceEEEEecCCCCE-EEEecCCCeEEEEeCCCccce
Q psy1859 26 QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIY-PVNAISFHQEYNT-FATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 26 ~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~-l~~~~~d~~v~~wd~~~~~~~ 103 (162)
+++++++.++.|.+|+. .+ .+....+..... . .+..++|+|+++. ++++..++.|.+||+.+++.+
T Consensus 2 ~~~v~~~~~~~v~~~d~--~~--~~~~~~~~~~~~--------~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 2 DYILAPARPDKLVVIDT--EK--MAVDKVITIADA--------GPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL 69 (337)
T ss_dssp EEEEEEETTTEEEEEET--TT--TEEEEEEECTTC--------TTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEE
T ss_pred cEEEEcCCCCeEEEEEC--CC--CcEEEEEEcCCC--------CCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeE
Confidence 46888899999999554 33 233333221110 0 2678999999965 456677899999999988877
Q ss_pred eeeeec-----ccceeEE-EcCCCCEEEEec------------CCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 104 CQFHRY-----DTGITSL-FHQEYNTFATGG------------SDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 104 ~~~~~~-----~~~v~~~-~~~~~~~l~~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..+... ...+..+ |+|+|+++++++ .++.|.+||+.+++.+..+.. ...+.+++|+||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~d 145 (337)
T 1pby_B 70 GRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARD 145 (337)
T ss_dssp EEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTT
T ss_pred eeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCC
Confidence 666532 2256678 999999998886 579999999999888777664 446788999986
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.53 E-value=1.2e-13 Score=102.50 Aligned_cols=121 Identities=9% Similarity=0.006 Sum_probs=85.8
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC---
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD--- 89 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d--- 89 (162)
..+...++|+|++++++++ ++.|.+|+....+ ... .+..+... .+......++|||+|+.|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--~~~--~~~~~~~~----~~~~~~~~~~~Spdg~~l~~~~~~~~~ 85 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--SSV--FLENSTFD----EFGHSINDYSISPDGQFILLEYNYVKQ 85 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCC--EEE--EECTTTTT----TCCSCCCEEEECTTSSEEEEEEEEEEC
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCc--eEE--EEechhhh----hhcccccceEECCCCCEEEEEECCeee
Confidence 3455689999999888876 8999996654432 222 23333211 011123458999999999988775
Q ss_pred ------CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeee
Q psy1859 90 ------GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLC 145 (162)
Q Consensus 90 ------~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 145 (162)
+.+.+||+.+++.. .+..+...+... |||||+.|+.+ .++.|++||+.+++..+
T Consensus 86 ~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 86 WRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYR 146 (740)
T ss_dssp SSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEE
T ss_pred EEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEE
Confidence 66779999988654 345566678888 99999999888 56899999998877543
No 161
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.53 E-value=3.1e-13 Score=90.83 Aligned_cols=125 Identities=10% Similarity=-0.038 Sum_probs=88.7
Q ss_pred cEEEEEEeeCCCeEE-EEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec------
Q psy1859 15 QTRCIKCFPNKQGYV-LSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG------ 87 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~-~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~------ 87 (162)
....++|+|+++.++ ++..++.|.+|+.. + .+....+..... ..+...+..++|+|+++.++++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~--~--~~~~~~~~~~~~----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 106 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLV--T--GETLGRIDLSTP----EERVKSLFGAALSPDGKTLAIYESPVRLE 106 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETT--T--CCEEEEEECCBT----TEEEECTTCEEECTTSSEEEEEEEEEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECC--C--CCeEeeEEcCCc----ccccccccceEECCCCCEEEEEecccccc
Confidence 467899999997664 55667888885543 3 222222221110 00122477899999998888775
Q ss_pred ------CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC
Q psy1859 88 ------SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY 150 (162)
Q Consensus 88 ------~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 150 (162)
.++.|.+||+.+++.+..+.. ...+..+ |+|++++++++ ++.|.+||+.+++.+..+..+
T Consensus 107 ~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~ 173 (337)
T 1pby_B 107 LTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQ 173 (337)
T ss_dssp SSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECST
T ss_pred cccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecc
Confidence 579999999998877766654 4557778 99999988888 688999999999887666543
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.53 E-value=2.9e-13 Score=99.06 Aligned_cols=139 Identities=6% Similarity=-0.105 Sum_probs=89.7
Q ss_pred cccEEEEEEeeCCCeEEEEcCC--------CcEEEEEecCCc------ccceeeeeeeeeeeccCcccceeceEEEEecC
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIE--------GRAAVEYLDTGP------EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ 78 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~--------g~i~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 78 (162)
...+..++|+|||+.|++++.+ +...||.|+... +..+.+. ..+. ..+..++|||
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~--~~~~---------~~~~~~~~Sp 197 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELS--DDAH---------RFVTGPRLSP 197 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESS--CSCS---------SEECCCEECT
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEE--ecCC---------CcccCceECC
Confidence 3466789999999999988765 123344455443 2222211 0111 2577899999
Q ss_pred CCCEEEEecCC--------CeEEEEeCC-Cc---cceeeeeecccceeEE-EcCCCCEEEEecCCC--eEEEEeCCCcee
Q psy1859 79 EYNTFATGGSD--------GYVNIWDGF-NK---KRLCQFHRYDTGITSL-FHQEYNTFATGGSDG--YVNIWDGFNKKR 143 (162)
Q Consensus 79 ~~~~l~~~~~d--------~~v~~wd~~-~~---~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~--~i~iwd~~~~~~ 143 (162)
+|+.|+.++.+ ..|++||+. ++ +.......+...+..+ |+|||+++++++.++ .|.+||+.+++.
T Consensus 198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence 99998877644 489999998 46 3333333446778888 999999888888888 677777766665
Q ss_pred eeeeccCCCc--------eeEEEecCC
Q psy1859 144 LCQFHRYDTG--------ITSLCFSYD 162 (162)
Q Consensus 144 ~~~~~~~~~~--------v~~v~~~pd 162 (162)
......+... +.+++|+||
T Consensus 278 ~~l~~~~~~~~~p~w~~~~~~~~~~~~ 304 (662)
T 3azo_A 278 TQLCRREEEFAGPLWTPGMRWFAPLAN 304 (662)
T ss_dssp EESSCCSSBSSCCCCSTTCCSEEECTT
T ss_pred eecccccccccCccccccCceEeEeCC
Confidence 4433332221 445666654
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.52 E-value=9.2e-13 Score=88.98 Aligned_cols=129 Identities=11% Similarity=-0.028 Sum_probs=89.7
Q ss_pred EEEEEEeeCCCeEEEEcCC------------CcEEEEEecCCccccee-eeeeeeeeeccCcccceeceEEEEecCCCCE
Q psy1859 16 TRCIKCFPNKQGYVLSSIE------------GRAAVEYLDTGPEMQKM-KYAFKCHRIKEDGIEKIYPVNAISFHQEYNT 82 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~------------g~i~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 82 (162)
+..++|+|+++++++++.+ +.+.+|+.+... ... ...+..+ ..+.+++|+|+++
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~----------~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL--EAKPVRTFPMP----------RQVYLMRAADDGS- 160 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG--GBCCSEEEECC----------SSCCCEEECTTSC-
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc--ccceeeeccCC----------CcccceeECCCCc-
Confidence 5678999999999988765 888886554311 111 1111111 1488899999999
Q ss_pred EEEecCCCeEEEEeCCCccceeeeeecc----------------------------------------------------
Q psy1859 83 FATGGSDGYVNIWDGFNKKRLCQFHRYD---------------------------------------------------- 110 (162)
Q Consensus 83 l~~~~~d~~v~~wd~~~~~~~~~~~~~~---------------------------------------------------- 110 (162)
+++++. .|.+||+.+++.+..+....
T Consensus 161 l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 161 LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 555543 39999998877655443221
Q ss_pred ----------------cceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 111 ----------------TGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 111 ----------------~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..+..+ |+| ++++++++ ++.|.+||+.+++.+..+.. ...+.+++|+||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~d 305 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKK 305 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSS
T ss_pred eccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCC
Confidence 123455 789 99999888 88999999999988777753 345788999986
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.51 E-value=3.8e-13 Score=92.09 Aligned_cols=136 Identities=9% Similarity=0.041 Sum_probs=91.6
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCE--EEEec-----
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNT--FATGG----- 87 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~--l~~~~----- 87 (162)
.+..++++|+++++++++.+ .+.+|+.+. + .+.... ..+... ..+..++|+|+++. ++++.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~-~--g~~~~~-~~~~~~-------g~~~~~~~spdg~~l~~~~~~~~~~~ 108 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKS-P--TEIVHE-ASHPIG-------GHPRANDADTNTRAIFLLAAKQPPYA 108 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEE-T--TEEEEE-EEEECC-------SSGGGGCTTSCCEEEEEEECSSTTCC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECC-C--CCEEEe-eEeecC-------CCCccEEECCCCCEEEEEEecCCcce
Confidence 45679999999999888777 888877652 2 122111 111100 02445889999984 44553
Q ss_pred --------CCCeEEEEeCC-Cccceeeeee----cccceeEE-EcCCCCEEEEec-CCCeEEEEeCC-Cceee--eeec-
Q psy1859 88 --------SDGYVNIWDGF-NKKRLCQFHR----YDTGITSL-FHQEYNTFATGG-SDGYVNIWDGF-NKKRL--CQFH- 148 (162)
Q Consensus 88 --------~d~~v~~wd~~-~~~~~~~~~~----~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~-~~~~~--~~~~- 148 (162)
.++.+.+|++. +++....+.. +...+..+ |+|+|+++++++ .++.|++||+. +++.. ..+.
T Consensus 109 ~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~ 188 (365)
T 1jof_A 109 VYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDA 188 (365)
T ss_dssp EEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred eccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEec
Confidence 68999999997 3554433332 34567888 999999888775 46799999998 66542 3333
Q ss_pred -cCCCceeEEEecCC
Q psy1859 149 -RYDTGITSLCFSYD 162 (162)
Q Consensus 149 -~~~~~v~~v~~~pd 162 (162)
.|...+..++|+||
T Consensus 189 ~~~g~~p~~~~~spd 203 (365)
T 1jof_A 189 PDPGDHPRWVAMHPT 203 (365)
T ss_dssp SSTTCCEEEEEECTT
T ss_pred CCCCCCCCEeEECCC
Confidence 23567899999997
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.48 E-value=6.2e-13 Score=98.67 Aligned_cols=132 Identities=8% Similarity=-0.076 Sum_probs=87.7
Q ss_pred EEEEeeCCCeEEEEcCCCcE-------EEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 18 CIKCFPNKQGYVLSSIEGRA-------AVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~g~i-------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.++|||||++++.++.++.+ .+|.||..++... .+..+. ..+...+|||+|+.|+.+ .++
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~---~l~~~~---------~~~~~~~~SPdG~~la~~-~~~ 132 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI---TEERIP---------NNTQWVTWSPVGHKLAYV-WNN 132 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC---CSSCCC---------TTEEEEEECSSTTCEEEE-ETT
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE---EcccCC---------CcceeeEECCCCCEEEEE-ECC
Confidence 47899999999998876332 2333555542222 222222 268999999999998887 468
Q ss_pred eEEEEeCCCccceeee-eecccce-----------------eEE-EcCCCCEEEEecCCC--------------------
Q psy1859 91 YVNIWDGFNKKRLCQF-HRYDTGI-----------------TSL-FHQEYNTFATGGSDG-------------------- 131 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~-~~~~~~v-----------------~~~-~~~~~~~l~~~~~d~-------------------- 131 (162)
.|++||+.+++..+.. .++...+ ..+ |||||++|+.+..|.
T Consensus 133 ~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~ 212 (740)
T 4a5s_A 133 DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPK 212 (740)
T ss_dssp EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCE
T ss_pred eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCc
Confidence 9999999887644321 1221111 347 999999998874221
Q ss_pred ----------------eEEEEeCCC---ce--eeeeec------cCCCceeEEEecCC
Q psy1859 132 ----------------YVNIWDGFN---KK--RLCQFH------RYDTGITSLCFSYD 162 (162)
Q Consensus 132 ----------------~i~iwd~~~---~~--~~~~~~------~~~~~v~~v~~~pd 162 (162)
.|++||+.+ ++ ....+. .|...+..++|+||
T Consensus 213 ~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd 270 (740)
T 4a5s_A 213 TVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ 270 (740)
T ss_dssp EEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET
T ss_pred ceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC
Confidence 588999988 73 222333 37778999999997
No 166
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.48 E-value=4.2e-12 Score=87.38 Aligned_cols=128 Identities=12% Similarity=-0.021 Sum_probs=93.6
Q ss_pred ccccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 10 SSLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
..+.. +..++| +++.|+++ .++.+++|+..... . ......+.. ++.++.+.+. .+++++.|
T Consensus 85 ~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~--~--~~~~~~~~~---------~v~~i~~~~p--~~av~~~d 145 (388)
T 1xip_A 85 KEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS--E--FRTVTSFEK---------PVFQLKNVNN--TLVILNSV 145 (388)
T ss_dssp EECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT--C--EEEEEECSS---------CEEEEEECSS--EEEEEETT
T ss_pred eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh--c--cCccceeec---------ceeeEEecCC--CEEEEECC
Confidence 34666 899999 88999998 78999996554322 1 112222222 5777776553 38889999
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee--eeee------c---cCCCceeEE
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR--LCQF------H---RYDTGITSL 157 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~------~---~~~~~v~~v 157 (162)
|.+.+||+.++.... ....++++ |||+| ++.|..||.+++|+...+.. ..++ . +|...|.+|
T Consensus 146 G~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI 219 (388)
T 1xip_A 146 NDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSV 219 (388)
T ss_dssp SEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEE
T ss_pred CCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEE
Confidence 999999999776532 45689999 99999 67888999999999877664 4455 2 367789999
Q ss_pred EecCC
Q psy1859 158 CFSYD 162 (162)
Q Consensus 158 ~~~pd 162 (162)
+|.++
T Consensus 220 ~wl~~ 224 (388)
T 1xip_A 220 TILSP 224 (388)
T ss_dssp EESSS
T ss_pred EEecC
Confidence 99864
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.46 E-value=1.5e-12 Score=95.24 Aligned_cols=136 Identities=5% Similarity=-0.095 Sum_probs=90.1
Q ss_pred EEEEe--eCCCe-EEEEcCCCcEEEEEecCC--c-ccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC--
Q psy1859 18 CIKCF--PNKQG-YVLSSIEGRAAVEYLDTG--P-EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD-- 89 (162)
Q Consensus 18 ~i~~~--~~~~~-l~~~~~~g~i~i~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d-- 89 (162)
...|+ ||++. ++.++.. ...||.++.. . +.... +..... ..|...+..++|+|+|+.|+.++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~-~~~l~~~~~~~~g~~~~~~---l~~~~~----~~~~~~~~~~~~spDg~~l~~~~~~~~ 152 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFG-DQRLYAFEPDAPGGAVPRP---LTPVSA----VGGGLRWADPVLLPERGEVWCMAEEFT 152 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTT-TCCEEEECTTSTTCCCCEE---CSCCCC----STTCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred cceeeeecCCCeEEEEEECC-CCeEEEEcCCCCCCCCCEe---ccCCcc----CCCCccccCcEECCCCCEEEEEEeccc
Confidence 44455 99998 7765443 4456667654 1 11111 111100 0022358899999999999988776
Q ss_pred --------CeEEEEeCCC------ccceeeee-ecccceeEE-EcCCCCEEEEecCC--------CeEEEEeCC-Cc---
Q psy1859 90 --------GYVNIWDGFN------KKRLCQFH-RYDTGITSL-FHQEYNTFATGGSD--------GYVNIWDGF-NK--- 141 (162)
Q Consensus 90 --------~~v~~wd~~~------~~~~~~~~-~~~~~v~~~-~~~~~~~l~~~~~d--------~~i~iwd~~-~~--- 141 (162)
..|++||+.+ ++. ..+. .+...+..+ |+|||++|+.++.+ ..|++||+. ++
T Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~ 231 (662)
T 3azo_A 153 GEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFA 231 (662)
T ss_dssp SSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEE
T ss_pred CCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccc
Confidence 5899999987 543 3444 444566677 99999999887744 379999998 56
Q ss_pred eeeeeeccCCCceeEEEecCC
Q psy1859 142 KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 142 ~~~~~~~~~~~~v~~v~~~pd 162 (162)
+.......+...+..++|+||
T Consensus 232 ~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 232 DTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp EEEEEEEETTBCEEEEEECTT
T ss_pred ccEEeCCCCCceEcceEECCC
Confidence 444444455778999999997
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.44 E-value=2.1e-11 Score=83.54 Aligned_cols=87 Identities=18% Similarity=0.153 Sum_probs=73.5
Q ss_pred EEEecCCCCEEEEecC-----------CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 73 AISFHQEYNTFATGGS-----------DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 73 ~~~~~p~~~~l~~~~~-----------d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
.++|+|++..+.++.. .+.|.+||+.+++.+..+..+. ...+ |+|+|++|++++. +.|.+||..+
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 3789999866655432 3589999999999999888766 8888 9999999999887 9999999999
Q ss_pred c--eeeeeeccCCCceeEEEecCC
Q psy1859 141 K--KRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 141 ~--~~~~~~~~~~~~v~~v~~~pd 162 (162)
+ +.+.++..+......++|+||
T Consensus 335 ~~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 335 PEPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp SSCEEEEEETTSCSSEEEEEECCC
T ss_pred CcceeeEEeccCCCCcEEEEecCC
Confidence 9 988887667778899999997
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.42 E-value=1.6e-11 Score=84.09 Aligned_cols=138 Identities=8% Similarity=0.037 Sum_probs=88.2
Q ss_pred EEEEEeeCCCe--EEEEc-------------CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCC
Q psy1859 17 RCIKCFPNKQG--YVLSS-------------IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYN 81 (162)
Q Consensus 17 ~~i~~~~~~~~--l~~~~-------------~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 81 (162)
..++++|++++ ++++. .++.+.+|+.+... +....+..... .+...+.+++|+|+|+
T Consensus 86 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g---~~~~~~~~~~~-----~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 86 RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG---KLEKNVQNYEY-----QENTGIHGMVFDPTET 157 (365)
T ss_dssp GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC---CEEEEEEEEEC-----CTTCCEEEEEECTTSS
T ss_pred ccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCC---cCcceEeeEEe-----CCCCcceEEEECCCCC
Confidence 34788999985 44443 58899998776432 11111111100 0112588999999998
Q ss_pred EEEEec-CCCeEEEEeCC-Cccce--eeee--ecccceeEE-EcCCCCEEEEecC-CCeEEEEeCC--Cceee---eee-
Q psy1859 82 TFATGG-SDGYVNIWDGF-NKKRL--CQFH--RYDTGITSL-FHQEYNTFATGGS-DGYVNIWDGF--NKKRL---CQF- 147 (162)
Q Consensus 82 ~l~~~~-~d~~v~~wd~~-~~~~~--~~~~--~~~~~v~~~-~~~~~~~l~~~~~-d~~i~iwd~~--~~~~~---~~~- 147 (162)
+++++. .++.|.+||+. +++.. ..+. .+...+..+ |+|+|+++++++. ++.|.+|++. +++.. ..+
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 237 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP 237 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence 777665 46899999998 66542 2232 124568888 9999999887764 6899999764 45432 122
Q ss_pred --cc----CCC------ceeEEE-ecCC
Q psy1859 148 --HR----YDT------GITSLC-FSYD 162 (162)
Q Consensus 148 --~~----~~~------~v~~v~-~~pd 162 (162)
.. |.. .+.+++ |+||
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spd 265 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFS 265 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTT
T ss_pred cCCCCcCCcccccccccccccEEEECCC
Confidence 11 122 488999 9997
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.40 E-value=8.3e-11 Score=77.68 Aligned_cols=135 Identities=10% Similarity=0.100 Sum_probs=95.1
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.....+++.|+++.+++...++.|.+| +... .....+.... +...+.+++++|+++++++...++.|.
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~--~~~g---~~~~~~~~~~-------~~~~p~~i~~~~~g~l~v~~~~~~~i~ 188 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIF--DQNG---NVLHKFGCSK-------HLEFPNGVVVNDKQEIFISDNRAHCVK 188 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEE--CTTS---CEEEEEECTT-------TCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEE--cCCC---CEEEEeCCCC-------ccCCcEEEEECCCCCEEEEECCCCEEE
Confidence 356789999999887777778888885 4322 2222221100 112578999999999888888899999
Q ss_pred EEeCCCccceeeeeec--ccceeEE-EcCCCCEEEEecCCC-eEEEEeCCCceeeeeeccCCC--ceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRY--DTGITSL-FHQEYNTFATGGSDG-YVNIWDGFNKKRLCQFHRYDT--GITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~--~~~v~~~-~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~--~v~~v~~~pd 162 (162)
+||.. ++.+..+... ...+..+ ++++|+++++...++ .|.+||. +++.+..+..+.. .+.+++|+||
T Consensus 189 ~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 189 VFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp EEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETT
T ss_pred EEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCC
Confidence 99974 4555555433 2467788 999999888887776 9999996 5666666654432 4778999875
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.40 E-value=1.8e-10 Score=77.82 Aligned_cols=143 Identities=6% Similarity=0.029 Sum_probs=98.1
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEEec-CCCeE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATGG-SDGYV 92 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~-~d~~v 92 (162)
....++++|+++.+++...++.|.+|+.+.. ...+..+...........+......++++| ++.++++.+ .++.|
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~---~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSK---EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCS---SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCC---eEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 4567999999998888888888888543321 112222211000000112333588999999 788888886 69999
Q ss_pred EEEeCCCccceeeeeecc----------cceeEE-EcCC-CCEEEEecCCCeEEEEeCCCceeeeeec--cCCCceeEEE
Q psy1859 93 NIWDGFNKKRLCQFHRYD----------TGITSL-FHQE-YNTFATGGSDGYVNIWDGFNKKRLCQFH--RYDTGITSLC 158 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~----------~~v~~~-~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~v~ 158 (162)
++|| .+++.+..+.... .....+ ++|+ +.++++...++.|++||..+++.+..+. .+...+.+++
T Consensus 169 ~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 169 VQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred EEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 9999 4566666554322 236788 9998 7777777788999999998888877773 4556788888
Q ss_pred ecC
Q psy1859 159 FSY 161 (162)
Q Consensus 159 ~~p 161 (162)
|+|
T Consensus 248 ~~p 250 (329)
T 3fvz_A 248 YIP 250 (329)
T ss_dssp EET
T ss_pred ecC
Confidence 887
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.36 E-value=1.9e-10 Score=77.75 Aligned_cols=136 Identities=13% Similarity=0.053 Sum_probs=94.0
Q ss_pred ccEEEEEEeeCCCeEEEEcCCC------------------------cEEEEEecCCcccceeeeeeeeeeeccCccccee
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEG------------------------RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIY 69 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g------------------------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (162)
+.+..++++|+|+.+++...++ .|.+ +|..+ .+....+.. .+..
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~d~~~--g~~~~~~~~--------~~~~ 91 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILV--IDPNN--AEILQSSGK--------NLFY 91 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEE--ECTTT--CCEEEEECT--------TTCS
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEE--EECCC--CeEEeccCC--------CccC
Confidence 5678999999999888877763 5666 55543 222221111 1222
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCcc-ceeeee---------ecccceeEE-EcC-CCCEEEEec-CCCeEEEE
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKK-RLCQFH---------RYDTGITSL-FHQ-EYNTFATGG-SDGYVNIW 136 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~-~~~~~~---------~~~~~v~~~-~~~-~~~~l~~~~-~d~~i~iw 136 (162)
....++++|+++++++...++.|++||..... .+..+. .+-.....+ ++| ++.++++.+ .++.|++|
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~ 171 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQF 171 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEE
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEE
Confidence 57899999999999999999999999986432 444442 222357788 999 788888886 68999999
Q ss_pred eCCCceeeeeeccCC----------CceeEEEecCC
Q psy1859 137 DGFNKKRLCQFHRYD----------TGITSLCFSYD 162 (162)
Q Consensus 137 d~~~~~~~~~~~~~~----------~~v~~v~~~pd 162 (162)
|. +++.+..+.... ..+..++++|+
T Consensus 172 ~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~ 206 (329)
T 3fvz_A 172 SP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH 206 (329)
T ss_dssp CT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETT
T ss_pred cC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECC
Confidence 94 676666653222 23788998875
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.36 E-value=2.3e-11 Score=89.94 Aligned_cols=132 Identities=4% Similarity=-0.128 Sum_probs=85.5
Q ss_pred cEEEEEEeeCCCeEEEEcCCC-----cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEG-----RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g-----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
.+..++|||||++++.+..++ .|++ +|..+ .+.... ..... .+..++|+|+++.|+.++.+
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v--~d~~t--g~~~~~-~~~~~---------~~~~~~wspDg~~l~~~~~~ 191 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKF--MKVDG--AKELPD-VLERV---------KFSCMAWTHDGKGMFYNAYP 191 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEE--EETTT--TEEEEE-EEEEE---------CSCCEEECTTSSEEEEEECC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEE--EECCC--CCCCcc-cccCc---------ccceEEEEeCCCEEEEEEEC
Confidence 467789999999998775543 5666 55544 222211 11111 36789999999988888776
Q ss_pred Ce----------------EEEEeCCCccce--eeeee--cccceeEE-EcCCCCEEEEecC-----CCeEEEEeCCC---
Q psy1859 90 GY----------------VNIWDGFNKKRL--CQFHR--YDTGITSL-FHQEYNTFATGGS-----DGYVNIWDGFN--- 140 (162)
Q Consensus 90 ~~----------------v~~wd~~~~~~~--~~~~~--~~~~v~~~-~~~~~~~l~~~~~-----d~~i~iwd~~~--- 140 (162)
+. |++|++.+++.. ..+.. +...+..+ |+|||++|+.++. +..|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc
Confidence 55 999999876532 22222 33446678 9999999888764 67899999976
Q ss_pred ---ce-eeeeeccCCCceeEEEecC
Q psy1859 141 ---KK-RLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 141 ---~~-~~~~~~~~~~~v~~v~~~p 161 (162)
+. ....+..+...+.. .|+|
T Consensus 272 ~~~~~~~~~~l~~~~~~~~~-~~s~ 295 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEGEYD-YVTN 295 (710)
T ss_dssp SSCSSCCCEEEECSSSSCEE-EEEE
T ss_pred ccCCccceEEeeCCCCcEEE-EEec
Confidence 43 34445555544443 2444
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.35 E-value=2e-11 Score=84.01 Aligned_cols=131 Identities=14% Similarity=0.028 Sum_probs=90.7
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccc---eeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQ---KMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
++..+++++....+++|+.++. .+|+.+.-.... ...+... . ...+.. |+.++| ++..|+++ .++.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~-~-----~~~lp~-V~~l~f--d~~~L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFK-W-----EKEIPD-VIFVCF--HGDQVLVS-TRNA 107 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCS-E-----EEECTT-EEEEEE--ETTEEEEE-ESSE
T ss_pred cccEEEEcCCCCEEEEeCCCEE-EEEEhhHhhhhhccccccccce-E-----EeeCCC-eeEEEE--CCCEEEEE-cCCc
Confidence 4678999999999999888754 556543211000 0001100 0 011334 999999 88899888 8899
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|++||+++.........+...+..+ +.+. .+++++.||.|.+||++++.... +...|++++|+|+
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpk 173 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNS 173 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSS
T ss_pred EEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCC
Confidence 9999998765555556666777777 5443 28888999999999998776543 4458999999985
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.35 E-value=7.4e-11 Score=79.86 Aligned_cols=89 Identities=12% Similarity=0.072 Sum_probs=66.7
Q ss_pred ceEEEEecCCCCEEEEecCC---C--eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC-------------
Q psy1859 70 PVNAISFHQEYNTFATGGSD---G--YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD------------- 130 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d---~--~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d------------- 130 (162)
.+..++|+|+|+.|+..+.+ + .|++||+.+++....... .. +..+ |+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 48899999999988876643 2 488889887765544433 33 7888 99999988887632
Q ss_pred --------------CeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 131 --------------GYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 131 --------------~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..|.+||+.+++.+..+.. . .+..+.|+||
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spd 181 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRD 181 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETT
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCC
Confidence 5799999998876455554 3 7888999987
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.33 E-value=5.4e-11 Score=80.52 Aligned_cols=101 Identities=9% Similarity=0.076 Sum_probs=70.4
Q ss_pred ccEEEEEEeeCCCeEEEEcCC---CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC--
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIE---GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS-- 88 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~---g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-- 88 (162)
..+..++|+|+|+.|+.++.+ +...||.++...+....+. .. .. +..++|+|+++.|+.++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~---~~---------~~-~~~~~wspdg~~l~~~~~~~ 125 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKIL---EA---------KN-IRSLEWNEDSRKLLIVGFKR 125 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEE---EE---------SE-EEEEEECTTSSEEEEEEECC
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEE---cC---------CC-ccceeECCCCCEEEEEEccC
Confidence 345678999999999887654 5666777776542222211 11 12 788999999988887753
Q ss_pred -------------------------CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC
Q psy1859 89 -------------------------DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD 130 (162)
Q Consensus 89 -------------------------d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d 130 (162)
...|++||+.+++.+..+.. . .+..+ |+|+| +++++..+
T Consensus 126 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 126 REDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp CC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred CCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 25789999988776455554 3 77788 99999 77777544
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.30 E-value=5e-11 Score=81.83 Aligned_cols=136 Identities=7% Similarity=-0.068 Sum_probs=83.7
Q ss_pred cccEEEEEEee-CCCeEEEEcCCCc----EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 13 KFQTRCIKCFP-NKQGYVLSSIEGR----AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 13 ~~~~~~i~~~~-~~~~l~~~~~~g~----i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
...+..+.|+| +++.++..+.++. ..||.++........+.. +.. ...+..++|+|+++.|+..+
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~-------~~~~~~~~~spdg~~l~~~~ 256 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE---HAE-------GESCTHEFWIPDGSAMAYVS 256 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC---CCT-------TEEEEEEEECTTSSCEEEEE
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec---cCC-------CccccceEECCCCCEEEEEe
Confidence 34567789999 7887777655433 445556654321222111 110 11478899999998776654
Q ss_pred CC-----CeEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEec----------------CCCeEEEEeCCCceee
Q psy1859 88 SD-----GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGG----------------SDGYVNIWDGFNKKRL 144 (162)
Q Consensus 88 ~d-----~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~----------------~d~~i~iwd~~~~~~~ 144 (162)
.+ +.|++||+.+++...... ... .. + |+| +|+++++++ .+..|.+||+.+++..
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (396)
T 3c5m_A 257 YFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ 333 (396)
T ss_dssp EETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC
T ss_pred cCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE
Confidence 33 459999998775433221 112 22 7 999 999888754 3478999999877643
Q ss_pred eeeccCCC-----------ceeEEEecCC
Q psy1859 145 CQFHRYDT-----------GITSLCFSYD 162 (162)
Q Consensus 145 ~~~~~~~~-----------~v~~v~~~pd 162 (162)
.+..+.. .+..++|+||
T Consensus 334 -~l~~~~~~~~~~~~~~~~~~~~~~~s~d 361 (396)
T 3c5m_A 334 -KLCKHSTSWDVLDGDRQITHPHPSFTPN 361 (396)
T ss_dssp -EEEECCCCCCCBTTBSSTTCCCCEECTT
T ss_pred -EccCCCCccccccccccCCCCCceEccC
Confidence 3444443 2566788876
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.30 E-value=5.8e-11 Score=87.65 Aligned_cols=137 Identities=6% Similarity=-0.096 Sum_probs=88.3
Q ss_pred EeeCCCeEEEEcCCC---cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEE-----EecCCCeE
Q psy1859 21 CFPNKQGYVLSSIEG---RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFA-----TGGSDGYV 92 (162)
Q Consensus 21 ~~~~~~~l~~~~~~g---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-----~~~~d~~v 92 (162)
.+|+|++++....++ .-.||..+...+..+.+..... ...+|...+.+++|||+|++|+ .|+.+..|
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~-----~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i 149 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNG-----WSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVL 149 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGG-----SSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHH-----hccCCCEEEEEEEECCCCCEEEEEECCCCCceEEE
Confidence 458898887765543 3556666643322222221110 0112344689999999999888 34455789
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCe-------------EEEEeCCCce----eeeeeccCCCce
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGY-------------VNIWDGFNKK----RLCQFHRYDTGI 154 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~-------------i~iwd~~~~~----~~~~~~~~~~~v 154 (162)
++||+.+++.+............+ |+|||+.|+.++.|.. |++|++.++. .+.....+...+
T Consensus 150 ~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~ 229 (695)
T 2bkl_A 150 HVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF 229 (695)
T ss_dssp EEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE
T ss_pred EEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE
Confidence 999999987651111111112566 9999999999887765 9999998775 333333455678
Q ss_pred eEEEecCC
Q psy1859 155 TSLCFSYD 162 (162)
Q Consensus 155 ~~v~~~pd 162 (162)
.++.|+||
T Consensus 230 ~~~~~SpD 237 (695)
T 2bkl_A 230 LQSDLSRD 237 (695)
T ss_dssp EEEEECTT
T ss_pred EEEEECCC
Confidence 89999997
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.30 E-value=5.3e-12 Score=86.70 Aligned_cols=134 Identities=4% Similarity=-0.190 Sum_probs=88.5
Q ss_pred EEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
+..++|+|+|++++.+.. ++...||.++...+.... +..... .....+.|+|+++.|+..+.++.|++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~---l~~~~~--------~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ---LTEGKG--------DNTFGGFISTDERAFFYVKNELNLMK 106 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE---CCCSSC--------BCTTTCEECTTSSEEEEEETTTEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE---eecCCC--------CccccceECCCCCEEEEEEcCCcEEE
Confidence 456789999999877644 455556667765422211 111111 01234789999999999988899999
Q ss_pred EeCCCccceeeeeecccceeE-------------------E-EcCCCCEEEEe-----cCCCeEEEEeCCCceeeeeecc
Q psy1859 95 WDGFNKKRLCQFHRYDTGITS-------------------L-FHQEYNTFATG-----GSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 95 wd~~~~~~~~~~~~~~~~v~~-------------------~-~~~~~~~l~~~-----~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
||+.+++.......+...... + |+|+++.++.. ..+..|.+||+.+++..... .
T Consensus 107 ~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~ 185 (396)
T 3c5m_A 107 VDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-Q 185 (396)
T ss_dssp EETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-E
T ss_pred EECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-c
Confidence 999887654444323332222 4 67888876654 35678999999887755444 4
Q ss_pred CCCceeEEEecC
Q psy1859 150 YDTGITSLCFSY 161 (162)
Q Consensus 150 ~~~~v~~v~~~p 161 (162)
+...+..+.|+|
T Consensus 186 ~~~~~~~~~~sp 197 (396)
T 3c5m_A 186 DTAWLGHPIYRP 197 (396)
T ss_dssp ESSCEEEEEEET
T ss_pred CCcccccceECC
Confidence 566788999998
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.28 E-value=2.1e-10 Score=78.68 Aligned_cols=130 Identities=8% Similarity=-0.082 Sum_probs=86.6
Q ss_pred EEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceE--EEEecCCCCEEEEe---------
Q psy1859 18 CIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVN--AISFHQEYNTFATG--------- 86 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~p~~~~l~~~--------- 86 (162)
.+.|+|+++.|+.++.++.+.+|+.+..+ ...+...... .+. ...++|++..++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~--~~~~~~~~~~-----------~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLE--ENVVYQVPAE-----------WVGYGTWVANSDCTKLVGIEIRREDWVP 151 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCC--EEEEEECCTT-----------EEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCc--ceeeeechhh-----------cccccceeECCCCCeeccccccCccccc
Confidence 46899999999999988888885554322 3333221111 122 23448999887642
Q ss_pred -------------cCCCeEEEEeCCCccceeeeeecccceeEE-EcC-CCCEEEEecCC------CeEEEEeCCCceeee
Q psy1859 87 -------------GSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQ-EYNTFATGGSD------GYVNIWDGFNKKRLC 145 (162)
Q Consensus 87 -------------~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d------~~i~iwd~~~~~~~~ 145 (162)
..+..|.+||+.+++. ..+..+...+..+ |+| +|+.++....+ ..|.++|...+.. .
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~ 229 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGES-TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-R 229 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCCE-EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-E
T ss_pred ccccchhhhhhccCCcceEEEEECCCCce-EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-E
Confidence 2457899999998754 3444556667888 999 99988877653 3788888865543 3
Q ss_pred eeccCC--CceeEEEecCC
Q psy1859 146 QFHRYD--TGITSLCFSYD 162 (162)
Q Consensus 146 ~~~~~~--~~v~~v~~~pd 162 (162)
.+..+. ..+..++|+||
T Consensus 230 ~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 230 KVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp ESCCCCTTEEEEEEEECTT
T ss_pred EeeeCCCCcccccceECCC
Confidence 343333 35788899997
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.27 E-value=1.7e-09 Score=72.80 Aligned_cols=134 Identities=15% Similarity=0.050 Sum_probs=88.3
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC----C
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD----G 90 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d----~ 90 (162)
....++|+++++.++++..++.|.+ |+...+...... ..+. ..+.+++++|+++++++...+ +
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~--~d~~~~~~~~~~--~~~~---------~~~~~i~~~~dg~l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFK--INPETKEIKRPF--VSHK---------ANPAAIKIHKDGRLFVCYLGDFKSTG 112 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEE--ECTTTCCEEEEE--ECSS---------SSEEEEEECTTSCEEEEECTTSSSCC
T ss_pred cccCcEECCCCCEEEEECCCCEEEE--EeCCCCcEEEEe--eCCC---------CCcceEEECCCCcEEEEeCCCCCCCc
Confidence 3578899999997778888888888 454431122111 1111 258999999999988887666 6
Q ss_pred eEEEEeCCCccceeeee--ecccceeEE-EcCCCCEEEEecC------CCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 91 YVNIWDGFNKKRLCQFH--RYDTGITSL-FHQEYNTFATGGS------DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.|.+||..++.....+. .....+..+ ++|+|+++++... .+.|..+|..+++... +......+..++|+|
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALST 191 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECT
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECC
Confidence 89999988765432222 233467888 9999988877654 3567777766544332 222333567788887
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
|
T Consensus 192 d 192 (333)
T 2dg1_A 192 D 192 (333)
T ss_dssp T
T ss_pred C
Confidence 5
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.25 E-value=1.2e-10 Score=86.01 Aligned_cols=131 Identities=7% Similarity=-0.166 Sum_probs=83.3
Q ss_pred cEEEEEEeeCCCeEEEE-----cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 15 QTRCIKCFPNKQGYVLS-----SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~-----~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
.+..++|||||++|+.+ +.+..|++|+.+... . ... .+... .....++|+|+|+.|+.++.+
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~--~--~~~--~~~~~-------~~~~~~~wspDg~~l~~~~~d 188 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGE--W--SKV--DVIEG-------GKYATPKWTPDSKGFYYEWLP 188 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCC--B--CSS--CCBSC-------CTTCCCEECTTSSEEEEEECC
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCC--C--cCC--cccCc-------ccccceEEecCCCEEEEEEec
Confidence 56788999999998854 233567775544322 2 100 01100 012679999999999988876
Q ss_pred Ce-------------EEEEeCCCccc----eeeeeecccceeEE-EcCCCCEEEEecCCC----eEEEEeCCCceeeeee
Q psy1859 90 GY-------------VNIWDGFNKKR----LCQFHRYDTGITSL-FHQEYNTFATGGSDG----YVNIWDGFNKKRLCQF 147 (162)
Q Consensus 90 ~~-------------v~~wd~~~~~~----~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~ 147 (162)
.. |++|++.++.. +.....+...+..+ |+|||++++.++.++ .|.+|+..+++ ...+
T Consensus 189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l 267 (695)
T 2bkl_A 189 TDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLL 267 (695)
T ss_dssp CCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEE
T ss_pred CCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEe
Confidence 65 99999987652 22222334567788 999999988877665 77888775554 3334
Q ss_pred ccCCCceeEEEe
Q psy1859 148 HRYDTGITSLCF 159 (162)
Q Consensus 148 ~~~~~~v~~v~~ 159 (162)
..+...+....|
T Consensus 268 ~~~~~~~~~~~~ 279 (695)
T 2bkl_A 268 VKGVGAKYEVHA 279 (695)
T ss_dssp EECSSCCEEEEE
T ss_pred ecCCCceEEEEe
Confidence 444444454444
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.23 E-value=2.3e-09 Score=71.19 Aligned_cols=131 Identities=8% Similarity=-0.072 Sum_probs=88.2
Q ss_pred cEEEEEEeeCCC-eEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 15 QTRCIKCFPNKQ-GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 15 ~~~~i~~~~~~~-~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
....++|+|+++ .++++..++.|.. |+.... ...+..+. ..+.+++++|+++++++...++.|.
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~--~~~~~~----~~~~~~~~---------~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWA--WSDDGQ----LSPEMHPS---------HHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEE--EETTSC----EEEEESSC---------SSEEEEEECTTCCEEEEETTTTEEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEE--EECCCC----eEEEECCC---------CCcceeeECCCCcEEEEecCCCeEE
Confidence 357899999998 6777788888887 555442 11222222 2588999999999888887789999
Q ss_pred EEeCCCccceeeeeec----ccceeEE-EcCCCCEEEE----ec-------------CCCeEEEEeCCCceeeeeeccCC
Q psy1859 94 IWDGFNKKRLCQFHRY----DTGITSL-FHQEYNTFAT----GG-------------SDGYVNIWDGFNKKRLCQFHRYD 151 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~----~~~v~~~-~~~~~~~l~~----~~-------------~d~~i~iwd~~~~~~~~~~~~~~ 151 (162)
+||..+++........ ...+..+ ++|+|+++++ +. ..+.|..++.. ++ +..+..+.
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~ 171 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDR 171 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCC
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCC
Confidence 9999777643332221 1235568 9999998887 33 13466666665 44 33344455
Q ss_pred CceeEEEecCC
Q psy1859 152 TGITSLCFSYD 162 (162)
Q Consensus 152 ~~v~~v~~~pd 162 (162)
..+..++|+||
T Consensus 172 ~~~~gi~~s~d 182 (296)
T 3e5z_A 172 VKPNGLAFLPS 182 (296)
T ss_dssp SSEEEEEECTT
T ss_pred CCCccEEECCC
Confidence 66788999886
No 184
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.23 E-value=2.1e-09 Score=71.59 Aligned_cols=135 Identities=15% Similarity=0.064 Sum_probs=92.8
Q ss_pred cEEEEEEeeCCCeEEEEcC---------CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE-E
Q psy1859 15 QTRCIKCFPNKQGYVLSSI---------EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-A 84 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~---------~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~ 84 (162)
....+++.|+|+++++... .....||.++... . .... .... .....++|+|+++.+ +
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g--~-~~~~-~~~~---------~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH--H-VKKY-FDQV---------DISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS--C-EEEE-EEEE---------SBEEEEEECTTSCEEEE
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC--C-EEEE-eecc---------ccccceEEcCCCCEEEE
Confidence 4577899999997665432 2345677777542 1 1111 1111 146789999999755 5
Q ss_pred EecCCCeEEEEeC--CCccc-----eeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeE
Q psy1859 85 TGGSDGYVNIWDG--FNKKR-----LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITS 156 (162)
Q Consensus 85 ~~~~d~~v~~wd~--~~~~~-----~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 156 (162)
+.+.++.|.+|++ .++.. ...+.........+ ++++|.+.++....+.|..||..+++.+..+..+...+++
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~ 245 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTS 245 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEE
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceE
Confidence 6667899999987 34432 11222233456778 9999988888777889999999889988888877778999
Q ss_pred EEec-CC
Q psy1859 157 LCFS-YD 162 (162)
Q Consensus 157 v~~~-pd 162 (162)
++|. ||
T Consensus 246 ~~f~g~d 252 (297)
T 3g4e_A 246 CCFGGKN 252 (297)
T ss_dssp EEEESGG
T ss_pred EEEeCCC
Confidence 9997 54
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.23 E-value=1e-10 Score=78.77 Aligned_cols=131 Identities=10% Similarity=0.014 Sum_probs=93.0
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+.+++|++++..++..+.++.+..| . ......+..+.. .+.+++|+|++++++++..++.|.+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~---------~~~~~~~~~~g~l~~~~~~~~~i~~~ 71 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTI--T-----AEPWLEISKKGL---------QLEGLNFDRQGQLFLLDVFEGNIFKI 71 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEE--E-----CEEEEEEESSCC---------CEEEEEECTTSCEEEEETTTCEEEEE
T ss_pred cceeeecCCccceeEEeecccCccc--c-----cceeEEEeccCc---------cccCcEECCCCCEEEEECCCCEEEEE
Confidence 5667888887777766777888875 2 112222222221 47899999999988888899999999
Q ss_pred eCCCccceeeeeecccceeEE-EcCCCCEEEEecCC----CeEEEEeCCCceeeeeec--cCCCceeEEEecCC
Q psy1859 96 DGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD----GYVNIWDGFNKKRLCQFH--RYDTGITSLCFSYD 162 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~--~~~~~v~~v~~~pd 162 (162)
|..+++...........+..+ ++|+|+++++...+ +.|.+||..+++....+. .+...+.+++++||
T Consensus 72 d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 72 NPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK 145 (333)
T ss_dssp CTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred eCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC
Confidence 998776544333455678889 99999988887666 689999998776443332 23456888888875
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.23 E-value=4.4e-10 Score=83.17 Aligned_cols=135 Identities=10% Similarity=0.016 Sum_probs=85.6
Q ss_pred eeCCCeEEEEcCC-Cc--EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC-----eEE
Q psy1859 22 FPNKQGYVLSSIE-GR--AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG-----YVN 93 (162)
Q Consensus 22 ~~~~~~l~~~~~~-g~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~-----~v~ 93 (162)
.|+|++++....+ +. -.+|..+...+..+.+.. .... ..+|...+..++|||+|++|+.+..++ .|+
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld--~~~l---~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~ 154 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLD--PNIL---SDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIK 154 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEEC--GGGG---CTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEE
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEEC--HHHh---ccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEE
Confidence 4888887765433 22 245656643322222211 1110 111333688999999999888665433 899
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCe----------------EEEEeCCCcee----eeeeccCCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGY----------------VNIWDGFNKKR----LCQFHRYDT 152 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~----------------i~iwd~~~~~~----~~~~~~~~~ 152 (162)
+||+.+++....... ...+..+ |+|||+.|+.+..++. |++|++.+++. +.....+..
T Consensus 155 v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~ 233 (710)
T 2xdw_A 155 FMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPK 233 (710)
T ss_dssp EEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCe
Confidence 999999876653222 2235678 9999999998887655 99999987752 222223455
Q ss_pred ceeEEEecCC
Q psy1859 153 GITSLCFSYD 162 (162)
Q Consensus 153 ~v~~v~~~pd 162 (162)
.+.++.|+||
T Consensus 234 ~~~~~~~SpD 243 (710)
T 2xdw_A 234 WMGGAELSDD 243 (710)
T ss_dssp CEEEEEECTT
T ss_pred EEEEEEEcCC
Confidence 6788999987
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.20 E-value=4e-09 Score=70.03 Aligned_cols=138 Identities=9% Similarity=-0.079 Sum_probs=87.0
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeee-eeeeeccCcccceeceEEEEecCCCCEEEE----ec
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAF-KCHRIKEDGIEKIYPVNAISFHQEYNTFAT----GG 87 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~----~~ 87 (162)
...+..++++|+++.+++...++.|.+ |+..++........ ..... ..+..++++|+|+++++ ++
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~--~d~~~g~~~~~~~~~~~~~~--------~~~~~i~~d~~G~l~vtd~~~g~ 137 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLER--QREPGGEWESIADSFEGKKL--------NSPNDVCLAPDGSLWFSDPTYGI 137 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEE--ECSTTCCEEEEECEETTEEC--------CCCCCEEECTTSCEEEEECSHHH
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEE--EcCCCCcEEEEeeccCCCCC--------CCCCCEEECCCCCEEEECCcccc
Confidence 345678999999998777766788888 55433212221110 11111 14678999999998887 33
Q ss_pred -------------CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCC-Ccee---eeeecc
Q psy1859 88 -------------SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGF-NKKR---LCQFHR 149 (162)
Q Consensus 88 -------------~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~-~~~~---~~~~~~ 149 (162)
..+.|..++.. ++ +..+.........+ |+|+++.+++...++.|.+|++. +++. ...+..
T Consensus 138 ~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 215 (296)
T 3e5z_A 138 DKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTV 215 (296)
T ss_dssp HCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECC
T ss_pred ccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeC
Confidence 13467677665 33 33344444566788 99999988777788999999986 4443 223323
Q ss_pred CCCceeEEEecCC
Q psy1859 150 YDTGITSLCFSYD 162 (162)
Q Consensus 150 ~~~~v~~v~~~pd 162 (162)
+...+.++++++|
T Consensus 216 ~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 216 EPGKTDGLRVDAG 228 (296)
T ss_dssp SSSCCCSEEEBTT
T ss_pred CCCCCCeEEECCC
Confidence 4445667777664
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.20 E-value=2.3e-09 Score=70.06 Aligned_cols=136 Identities=8% Similarity=-0.046 Sum_probs=91.5
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
.....+++.++++.+++...++.|.+| +..+ .......... ...+.+++++|+++++++...++.|.
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~--~~~~--~~~~~~~~~~---------~~~p~~i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKL--AAGS--KTQTVLPFTG---------LNDPDGVAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEE--CTTC--CSCEECCCCS---------CCSCCCEEECTTCCEEEEEGGGTEEE
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEE--ECCC--ceeEeecccc---------CCCceeEEEeCCCCEEEEECCCCEEE
Confidence 346789999999877777777888874 4433 1111111111 11467899999999888888889999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
+||................+..+ ++++|.++++...++.|.+||............+-..+.+++++||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~ 244 (270)
T 1rwi_B 175 KLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD 244 (270)
T ss_dssp EECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTT
T ss_pred EEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCC
Confidence 99987654433222223567788 9999987777778889999998665433222223356888988875
No 189
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.19 E-value=3.5e-09 Score=69.84 Aligned_cols=133 Identities=8% Similarity=0.016 Sum_probs=90.2
Q ss_pred cEEEEEEe-eCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 15 QTRCIKCF-PNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 15 ~~~~i~~~-~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
....+++. ++++.+++... ++.|.+| +... +....+... +...+.+++++|+++++++...++.|
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~--d~~g---~~~~~~~~~--------~~~~~~~i~~~~~g~l~v~~~~~~~i 144 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIY--NQYG---QFVRKFGAT--------ILQHPRGVTVDNKGRIIVVECKVMRV 144 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEE--CTTS---CEEEEECTT--------TCSCEEEEEECTTSCEEEEETTTTEE
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEE--CCCC---cEEEEecCc--------cCCCceEEEEeCCCCEEEEECCCCEE
Confidence 45778885 56666666533 6778874 4322 222222111 11257899999999988888889999
Q ss_pred EEEeCCCccceeeee--ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC--CCceeEEEecCC
Q psy1859 93 NIWDGFNKKRLCQFH--RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY--DTGITSLCFSYD 162 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~v~~v~~~pd 162 (162)
.+||.. ++.+..+. .+...+..+ ++|+|+++++...++.|++||. +++.+..+..+ ...+.+++++||
T Consensus 145 ~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~ 217 (286)
T 1q7f_A 145 IIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSN 217 (286)
T ss_dssp EEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTT
T ss_pred EEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCC
Confidence 999964 55555543 233457788 9999998888888999999998 45555555433 356888998875
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.19 E-value=2.3e-09 Score=77.50 Aligned_cols=111 Identities=16% Similarity=0.076 Sum_probs=82.3
Q ss_pred eCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCC--Cc
Q psy1859 23 PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGF--NK 100 (162)
Q Consensus 23 ~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~--~~ 100 (162)
|.+..+++...++.|.+ +|..+ .+.+..+.... .+..+.|+|+++++++++.++.|.+||+. +.
T Consensus 165 ~~~~~~V~~~~~~~V~v--iD~~t--~~v~~~i~~g~----------~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~ 230 (567)
T 1qks_A 165 LENLFSVTLRDAGQIAL--IDGST--YEIKTVLDTGY----------AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP 230 (567)
T ss_dssp GGGEEEEEETTTTEEEE--EETTT--CCEEEEEECSS----------CEEEEEECTTSCEEEEEETTSEEEEEETTSSSC
T ss_pred CCceEEEEeCCCCeEEE--EECCC--CeEEEEEeCCC----------CccceEECCCCCEEEEEcCCCeEEEEECCCCCC
Confidence 34455667778899998 56554 33443433222 36789999999999999999999999996 67
Q ss_pred cceeeeeecccceeEE-Ec----CCCCEEEEec-CCCeEEEEeCCCceeeeeec
Q psy1859 101 KRLCQFHRYDTGITSL-FH----QEYNTFATGG-SDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 101 ~~~~~~~~~~~~v~~~-~~----~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~ 148 (162)
+.+.++.. ......+ |+ |||+++++++ .++++.++|..+.+.+.++.
T Consensus 231 ~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 231 TTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp CEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred cEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 77777664 3345677 99 6999988877 45899999999988777654
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.17 E-value=7.5e-09 Score=74.85 Aligned_cols=122 Identities=11% Similarity=-0.036 Sum_probs=85.2
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEec----CCCCEEEEec-CC
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFH----QEYNTFATGG-SD 89 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----p~~~~l~~~~-~d 89 (162)
....+.++|+++++++++.++.|.+|+....+ .+.+..+.... ....++|+ |+|++++++. .+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t--~~~v~~i~~G~----------~P~~ia~s~~~~pDGk~l~v~n~~~ 265 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKE--PTTVAEIKIGS----------EARSIETSKMEGWEDKYAIAGAYWP 265 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSS--CCEEEEEECCS----------EEEEEEECCSTTCTTTEEEEEEEET
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCC--CcEeEEEecCC----------CCceeEEccccCCCCCEEEEEEccC
Confidence 34578999999999999999999995543123 33333333222 35789999 6998777665 56
Q ss_pred CeEEEEeCCCccceeeeeec-------------------------------------------------------cccee
Q psy1859 90 GYVNIWDGFNKKRLCQFHRY-------------------------------------------------------DTGIT 114 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~-------------------------------------------------------~~~v~ 114 (162)
+.+.++|..+.+.+..+... .....
T Consensus 266 ~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~ 345 (567)
T 1qks_A 266 PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLH 345 (567)
T ss_dssp TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEE
T ss_pred CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecccccc
Confidence 99999998877665544310 01223
Q ss_pred EE-EcCCCCEEEEec-CCCeEEEEeCCCceeeeeec
Q psy1859 115 SL-FHQEYNTFATGG-SDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 115 ~~-~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~ 148 (162)
.+ |+|+|++++++. .++.|.++|+.+++.+..+.
T Consensus 346 d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~ 381 (567)
T 1qks_A 346 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED 381 (567)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred CceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe
Confidence 56 899999887665 67899999999998766554
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.15 E-value=3.7e-09 Score=71.45 Aligned_cols=139 Identities=10% Similarity=0.019 Sum_probs=90.6
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-CCCeE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-SDGYV 92 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~v 92 (162)
.....++++++++.+++...++.|.+ +|..+ .+....+..... .+.......+++ .+++++++.. .++.|
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~--iD~~t--~~~~~~i~~g~~----~~~~~~p~~i~~-~~~~lyv~~~~~~~~v 154 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFI--INPKT--YEITGYIECPDM----DMESGSTEQMVQ-YGKYVYVNCWSYQNRI 154 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEE--EETTT--TEEEEEEECTTC----CTTTCBCCCEEE-ETTEEEEEECTTCCEE
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEE--EECCC--CeEEEEEEcCCc----cccCCCcceEEE-ECCEEEEEcCCCCCEE
Confidence 44577899998855455447888888 55554 333222221110 000012445666 4445555554 48999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC----------CeEEEEeCCCceeeeeeccC-CCceeEEEec
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD----------GYVNIWDGFNKKRLCQFHRY-DTGITSLCFS 160 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~-~~~v~~v~~~ 160 (162)
.++|..+++.+..+.. ......+ ++|+|++++++..+ +.|.++|..+++....+... ...+..++|+
T Consensus 155 ~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 155 LKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp EEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC
T ss_pred EEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe
Confidence 9999999887777654 2344567 99999987777655 78999999998877666532 2368899999
Q ss_pred CC
Q psy1859 161 YD 162 (162)
Q Consensus 161 pd 162 (162)
||
T Consensus 234 ~d 235 (328)
T 3dsm_A 234 GT 235 (328)
T ss_dssp TT
T ss_pred cC
Confidence 85
No 193
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.14 E-value=1.9e-09 Score=73.87 Aligned_cols=108 Identities=10% Similarity=-0.031 Sum_probs=76.7
Q ss_pred CCCeEEEEc------CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec----------
Q psy1859 24 NKQGYVLSS------IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG---------- 87 (162)
Q Consensus 24 ~~~~l~~~~------~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~---------- 87 (162)
+++++++.. .|+.+.+ ||..+ .+....+..... + .++|+|++++++++.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v--~D~~t--~~~~~~i~~g~~---------p--~i~~spdg~~lyv~~~~~~~~~~g~ 78 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHV--YDYTN--GKFLGMVPTAFN---------G--HVQVSNDGKKIYTMTTYHERITRGK 78 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEE--EETTT--CCEEEEEECCEE---------E--EEEECTTSSEEEEEEEEETTSSSSC
T ss_pred CCCEEEEECCCCCccccCeEEE--EECCC--CeEEEEecCCCC---------C--ceEECCCCCEEEEEEecccccccCC
Confidence 455555542 3568888 55544 333333333221 3 899999998888775
Q ss_pred CCCeEEEEeCCCccceeeeeec------ccceeEE-EcCCCCEEEEecC--CCeEEEEeCCCceeeee
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRY------DTGITSL-FHQEYNTFATGGS--DGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~------~~~v~~~-~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~ 146 (162)
.++.|.+||..+.+.+..+... ......+ ++|+|++|+++.. ++.|.+||+.+++.+..
T Consensus 79 ~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 79 RSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp EEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 3678999999988887777542 2345677 9999999999874 68999999999988776
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.11 E-value=1.1e-08 Score=68.21 Aligned_cols=135 Identities=7% Similarity=-0.035 Sum_probs=90.4
Q ss_pred cEEEEEEeeCCCeEEEEcCCC-------------cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEec----
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEG-------------RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFH---- 77 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g-------------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---- 77 (162)
.+..+++.++++.+++...++ ...||.++... ..... .... .....++|+
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~---~~~~---------~~~~~i~~~~~~d 184 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-QMIQV---DTAF---------QFPNGIAVRHMND 184 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-CEEEE---EEEE---------SSEEEEEEEECTT
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCC-CEEEe---ccCC---------CCcceEEEecccC
Confidence 367899999998777765442 24565576542 11111 1111 136788999
Q ss_pred CCCCE-EEEecCCCeEEEEeCC-Cccc-----eeeeeecc-cceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 78 QEYNT-FATGGSDGYVNIWDGF-NKKR-----LCQFHRYD-TGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 78 p~~~~-l~~~~~d~~v~~wd~~-~~~~-----~~~~~~~~-~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
|+++. +++...++.|.+||.. +++. ...+..+. .....+ ++++|.++++...++.|.+||..+++.+..+.
T Consensus 185 ~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 185 GRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp SCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 99854 5555678999999976 3331 12222222 456678 99999988887788899999998777666666
Q ss_pred cCCCceeEEEecCC
Q psy1859 149 RYDTGITSLCFSYD 162 (162)
Q Consensus 149 ~~~~~v~~v~~~pd 162 (162)
.+...+.+++|+||
T Consensus 265 ~~~~~~~~i~~~~d 278 (314)
T 1pjx_A 265 CPFEKPSNLHFKPQ 278 (314)
T ss_dssp CSSSCEEEEEECTT
T ss_pred CCCCCceeEEECCC
Confidence 66678899999875
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.11 E-value=6e-09 Score=68.05 Aligned_cols=134 Identities=9% Similarity=0.018 Sum_probs=88.0
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
....+++.++++.+++.. ++.|.+ ++... ... ..+.... ...+.+++++|+++++++...++.|.+
T Consensus 68 ~p~~i~~~~~g~l~v~~~-~~~i~~--~d~~~--~~~-~~~~~~~--------~~~p~~i~~~~~g~l~v~~~~~~~i~~ 133 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF-NNRVVT--LAAGS--NNQ-TVLPFDG--------LNYPEGLAVDTQGAVYVADRGNNRVVK 133 (270)
T ss_dssp SCCCEEECTTCCEEEEET-TTEEEE--ECTTC--SCC-EECCCCS--------CSSEEEEEECTTCCEEEEEGGGTEEEE
T ss_pred CcceeEECCCCCEEEEcC-CCEEEE--EeCCC--ceE-eeeecCC--------cCCCcceEECCCCCEEEEECCCCEEEE
Confidence 456788999988666655 777777 55433 111 1111111 114789999999998888888899999
Q ss_pred EeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 95 WDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 95 wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|+..+.............+..+ ++++|+++++...++.|.+||............+...+.+++++|+
T Consensus 134 ~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 202 (270)
T 1rwi_B 134 LAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEA 202 (270)
T ss_dssp ECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTT
T ss_pred EECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCC
Confidence 9865543322222223356778 9999997777777889999999766544332233356788888764
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.10 E-value=2.2e-08 Score=66.10 Aligned_cols=125 Identities=7% Similarity=-0.073 Sum_probs=89.8
Q ss_pred ccEEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v 92 (162)
.++.++.+.++|+.+++.+. .+.+.. ++.. .+.+..+...... ..+......+++.++|+++++...++.|
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~--vd~~---Gk~l~~~~~~~~~---~~~~~~~~~v~~~~~G~~lv~~~~~~~v 148 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILE--VNMK---GEVLSKTEFETGI---ERPHAQFRQINKNKKGNYLVPLFATSEV 148 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEE--ECTT---SCEEEEEEECCSC---SSGGGSCSCCEECTTSCEEEEETTTTEE
T ss_pred ccccccEECCCCCEEEEecCCCCEEEE--EeCC---CCEEEEEeccCCC---CcccccccCceECCCCCEEEEecCCCEE
Confidence 45677888999999888776 554444 6653 2333333221110 0011235566788999999999999999
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
..||.. ++.+.++... .....+ ..++|.+++++..++.|..+|..+++.+.++.
T Consensus 149 ~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 149 REIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 999998 8888887654 345566 88999999999888899999999899888775
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.09 E-value=3.5e-09 Score=78.80 Aligned_cols=129 Identities=7% Similarity=-0.049 Sum_probs=79.4
Q ss_pred cEEEEEEeeCCCeEEEEcCC-Cc--EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC-
Q psy1859 15 QTRCIKCFPNKQGYVLSSIE-GR--AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG- 90 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~-g~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~- 90 (162)
.+..++|||||++++.++.+ |. ..||.+|..++.. . ....... .+..++|+|+ +.|+.++.++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--~-~~~~~~~---------~~~~~~wspD-~~l~~~~~~~~ 230 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--L-ADELKWV---------KFSGLAWLGN-DALLYSRFAEP 230 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--E-EEEEEEE---------ESCCCEESTT-SEEEEEECCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--C-CccCCCc---------eeccEEEECC-CEEEEEEecCc
Confidence 46678999999999887543 33 2333355544222 1 1111111 2468999999 8888777654
Q ss_pred -------------eEEEEeCCCccc--eeeeee--cccceeEE-EcCCCCEEEEecCC-----CeEEEEeCCCc--eeee
Q psy1859 91 -------------YVNIWDGFNKKR--LCQFHR--YDTGITSL-FHQEYNTFATGGSD-----GYVNIWDGFNK--KRLC 145 (162)
Q Consensus 91 -------------~v~~wd~~~~~~--~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d-----~~i~iwd~~~~--~~~~ 145 (162)
.|++|++.++.. ...+.. +...+..+ |+|||++++..+.+ ..|++||+.++ +...
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 310 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT 310 (741)
T ss_dssp --------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE
T ss_pred ccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE
Confidence 388999977642 122222 22346778 99999988887654 38999999876 3134
Q ss_pred eeccCCCceeE
Q psy1859 146 QFHRYDTGITS 156 (162)
Q Consensus 146 ~~~~~~~~v~~ 156 (162)
.+..+...+..
T Consensus 311 ~l~~~~~~~~~ 321 (741)
T 1yr2_A 311 ALIPDLKAQWD 321 (741)
T ss_dssp EEECSSSSCEE
T ss_pred EecCCCCceEE
Confidence 44444443333
No 198
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.09 E-value=4.8e-08 Score=65.90 Aligned_cols=133 Identities=11% Similarity=0.033 Sum_probs=87.5
Q ss_pred cEEEEEEeeCCCeEEEEcCC----CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEE-EEecCC
Q psy1859 15 QTRCIKCFPNKQGYVLSSIE----GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTF-ATGGSD 89 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d 89 (162)
.+..++++|+|+++++...+ +...||.++ .. .... +..... ....++|+|+++.+ ++.+.+
T Consensus 135 ~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g-~~~~---~~~~~~---------~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 135 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KG-KVTK---LFADIS---------IPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TT-EEEE---EEEEES---------SEEEEEECTTSCEEEEEETTT
T ss_pred CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CC-cEEE---eeCCCc---------ccCCeEEcCCCCEEEEEECCC
Confidence 46789999999876654321 345666676 22 1111 111111 36789999999765 455667
Q ss_pred CeEEEEeCC--Cc-cce--eee---eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 90 GYVNIWDGF--NK-KRL--CQF---HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 90 ~~v~~wd~~--~~-~~~--~~~---~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
+.|.+||+. ++ +.. ..+ .........+ ++++|.+.++...++.|..||. +++.+..+..+...+++++|+
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEe
Confidence 899999986 45 321 112 1123445677 9999988777767789999998 567677776666679999997
Q ss_pred -CC
Q psy1859 161 -YD 162 (162)
Q Consensus 161 -pd 162 (162)
||
T Consensus 280 g~d 282 (326)
T 2ghs_A 280 GPD 282 (326)
T ss_dssp STT
T ss_pred cCC
Confidence 64
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.08 E-value=1.5e-08 Score=66.95 Aligned_cols=129 Identities=7% Similarity=-0.079 Sum_probs=90.7
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC-CCeEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS-DGYVN 93 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d~~v~ 93 (162)
.+.++.+.|+|+.++ +.++.+.. +|. + .+.+..+..... ..+.++.+.|+|+.+++.+. ++.+.
T Consensus 38 ~~~~~~~~pdG~ilv--s~~~~V~~--~d~-~--G~~~W~~~~~~~--------~~~~~~~~~~dG~~lv~~~~~~~~v~ 102 (276)
T 3no2_A 38 ECNSVAATKAGEILF--SYSKGAKM--ITR-D--GRELWNIAAPAG--------CEMQTARILPDGNALVAWCGHPSTIL 102 (276)
T ss_dssp CCCEEEECTTSCEEE--ECBSEEEE--ECT-T--SCEEEEEECCTT--------CEEEEEEECTTSCEEEEEESTTEEEE
T ss_pred CCcCeEECCCCCEEE--eCCCCEEE--ECC-C--CCEEEEEcCCCC--------ccccccEECCCCCEEEEecCCCCEEE
Confidence 467888999999888 34666666 665 3 445555554311 14778899999999998877 88888
Q ss_pred EEeCCCccceeeeeec------ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 94 IWDGFNKKRLCQFHRY------DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~------~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.+|. +++.+..+... ......+ +.++|.++++...++.|..||.. |+.+.++... ..+.++.+.+
T Consensus 103 ~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~ 174 (276)
T 3no2_A 103 EVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLD 174 (276)
T ss_dssp EECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECT
T ss_pred EEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcC
Confidence 8886 67766665421 1234445 78899999999999999999997 8888887643 2344444443
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.08 E-value=8.3e-08 Score=63.31 Aligned_cols=133 Identities=6% Similarity=-0.025 Sum_probs=89.6
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+.++++.++++.+++...++.+.+| +... ....+..... ...+.++++++++.++++...++.|.
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~--d~~~--~~~~~~~~~~---------~~~~~~i~~~~~g~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCI--NLDG--KITEYPLPTP---------DAKVMCLTISSDGEVWFTENAANKIG 81 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEE--CTTC--CEEEEECSST---------TCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEE--cCCC--CeEEecCCcc---------cCceeeEEECCCCCEEEeCCCCCeEE
Confidence 467899999999977776667888884 4432 1111111111 12588999999999888887789999
Q ss_pred EEeCCCccceeeee--ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee-eccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFH--RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ-FHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~v~~~pd 162 (162)
.||.. ++ ...+. .....+..+ ++++|.++++...++.|..||. +++.... .......+.++++.|+
T Consensus 82 ~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 82 RITKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp EECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred EECCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC
Confidence 99986 32 22222 234467788 9999998888878889999998 5543322 2223446778887764
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.02 E-value=7.7e-09 Score=76.98 Aligned_cols=135 Identities=10% Similarity=-0.076 Sum_probs=82.5
Q ss_pred EeeCCCeEEEEcCCCc---EEEEEecCC---cccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC-----
Q psy1859 21 CFPNKQGYVLSSIEGR---AAVEYLDTG---PEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD----- 89 (162)
Q Consensus 21 ~~~~~~~l~~~~~~g~---i~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d----- 89 (162)
.+|+|++++....++. -.+|..+.. .+..+.+..... . ..+|...+..++|||+|++|+.++.+
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~--l---~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~ 188 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNT--W---AKDGATALDAWAASDDGRLLAYSVQDGGSDW 188 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGG--C---C----EEEEEEEECTTSSEEEEEEEETTCSE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHH--h---ccCCCEEEEeEEECCCCCEEEEEEcCCCCce
Confidence 4589998877654432 566766643 221222211100 0 00122368899999999988876543
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCe--------------EEEEeCCCcee--eeeec--cC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGY--------------VNIWDGFNKKR--LCQFH--RY 150 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~--------------i~iwd~~~~~~--~~~~~--~~ 150 (162)
..|++||+.+++.+... .....+..+ |+|| +.|+.+..+.. |++|++.++.. ...+. .+
T Consensus 189 ~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~ 266 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL 266 (741)
T ss_dssp EEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC
Confidence 46999999998765431 122223466 9999 98888776543 89999977652 22222 33
Q ss_pred CCceeEEEecCC
Q psy1859 151 DTGITSLCFSYD 162 (162)
Q Consensus 151 ~~~v~~v~~~pd 162 (162)
...+.++.|+||
T Consensus 267 ~~~~~~~~~SpD 278 (741)
T 1yr2_A 267 PKRGHGASVSSD 278 (741)
T ss_dssp TTCEEEEEECTT
T ss_pred CeEEEEEEECCC
Confidence 345888999987
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.99 E-value=1.7e-07 Score=61.85 Aligned_cols=134 Identities=6% Similarity=-0.006 Sum_probs=89.7
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+..+++.++++.+++...++.+.. ++... ....+.+... ...+.+++++|++.++++...++.|.
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~--~~~~g--~~~~~~~~~~---------~~~~~~i~~~~~g~l~v~~~~~~~i~ 123 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGR--ITKKG--IIKEYTLPNP---------DSAPYGITEGPNGDIWFTEMNGNRIG 123 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEE--ECTTS--CEEEEECSST---------TCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEE--ECCCC--cEEEEeCCCc---------CCCceeeEECCCCCEEEEecCCceEE
Confidence 45678899999988777766777777 55432 1111111111 12578999999999888888889999
Q ss_pred EEeCCCcccee-eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee-eccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLC-QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ-FHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~-~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~v~~~pd 162 (162)
.||. +++... ........+..+ ++++|.++++...++.|..||. +++.... .......+.+++++++
T Consensus 124 ~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~ 193 (299)
T 2z2n_A 124 RITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGND 193 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred EECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC
Confidence 9998 443322 122234557788 9999988888777889999999 6654332 2233445778888764
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.98 E-value=1.5e-08 Score=69.79 Aligned_cols=114 Identities=12% Similarity=0.012 Sum_probs=82.7
Q ss_pred EEeeCCCeEEEEcC-----CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-------
Q psy1859 20 KCFPNKQGYVLSSI-----EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG------- 87 (162)
Q Consensus 20 ~~~~~~~~l~~~~~-----~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~------- 87 (162)
...|+++.+++... ++.+.+ +|..+ .+.+..+..... + .++++|+++.+.+++
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~V--iD~~t--~~v~~~I~vG~~---------P--~va~spDG~~lyVan~~~~r~~ 103 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFV--IDGEA--GRVIGMIDGGFL---------P--NPVVADDGSFIAHASTVFSRIA 103 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEE--EETTT--TEEEEEEEECSS---------C--EEEECTTSSCEEEEEEEEEETT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEE--EECCC--CeEEEEEECCCC---------C--cEEECCCCCEEEEEcccccccc
Confidence 34688888887754 466776 77665 444444433221 3 499999998776654
Q ss_pred ---CCCeEEEEeCCCccceeeeeecc-------cceeEE-EcCCCCEEEEecC--CCeEEEEeCCCceeeeeec
Q psy1859 88 ---SDGYVNIWDGFNKKRLCQFHRYD-------TGITSL-FHQEYNTFATGGS--DGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 88 ---~d~~v~~wd~~~~~~~~~~~~~~-------~~v~~~-~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~ 148 (162)
.++.|.+||..+.+.+..+.... .....+ |+|||++++++.. ++.|.++|+.+++.+.++.
T Consensus 104 ~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 104 RGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp EEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred cCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 36789999999998888775422 235567 9999999988864 6899999999999887775
No 204
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.94 E-value=1.4e-07 Score=63.75 Aligned_cols=129 Identities=11% Similarity=-0.047 Sum_probs=84.7
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
...+++. +++.+++...++.|.+ +|..+ .+.+..+.... ....++++++++++++...++.|.+|
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~v--iD~~t--~~~~~~i~~~~----------~p~~i~~~~~g~lyv~~~~~~~v~~i 110 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFA--IDINT--FKEVGRITGFT----------SPRYIHFLSDEKAYVTQIWDYRIFII 110 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEE--EETTT--CCEEEEEECCS----------SEEEEEEEETTEEEEEEBSCSEEEEE
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEE--EECcc--cEEEEEcCCCC----------CCcEEEEeCCCeEEEEECCCCeEEEE
Confidence 4556663 4556666677788998 56554 33333332221 47889999988666665589999999
Q ss_pred eCCCccceeeeeecc-----cceeEE-EcCCCCEEEEec--CCCeEEEEeCCCceeeeeeccCCCceeEEEecCC
Q psy1859 96 DGFNKKRLCQFHRYD-----TGITSL-FHQEYNTFATGG--SDGYVNIWDGFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 96 d~~~~~~~~~~~~~~-----~~v~~~-~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
|..+++....+.... .....+ + ++..++++. .++.|.++|+.+++.+.++... .....++++||
T Consensus 111 D~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~d 182 (328)
T 3dsm_A 111 NPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKY 182 (328)
T ss_dssp ETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTT
T ss_pred ECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCC
Confidence 999888776665332 144556 7 344444444 4889999999999887776532 23456666664
No 205
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=2.8e-07 Score=62.55 Aligned_cols=128 Identities=11% Similarity=0.012 Sum_probs=82.5
Q ss_pred ccEEEEEEeeCCCeEEEEc--CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC---
Q psy1859 14 FQTRCIKCFPNKQGYVLSS--IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS--- 88 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~--~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--- 88 (162)
.....++++++++.+++.. .++.++||.++ + .+ ...+.... .....+...+.+++++++++++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~--g~-~~~~p~~~--~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT--Q--DG-LIPFPPQS--GNAIITFDTVLGIKSDGNGIVWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE--T--TE-EEESCCCC--SSCCCCCSCEEEEEECSSSEEEEEECHHHH
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC--C--CC-eecCCCcc--cCcccceeEeeEEEEcCCCcEEEEcCCCCc
Confidence 4567899999999888863 23435666676 2 12 11111100 011123447999999999887776543
Q ss_pred --CCeEEEEeCCCccceeeeeec------ccceeEE-EcCCCCEE-EEec---CCCeEEEEeCCCceeeeeec
Q psy1859 89 --DGYVNIWDGFNKKRLCQFHRY------DTGITSL-FHQEYNTF-ATGG---SDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 89 --d~~v~~wd~~~~~~~~~~~~~------~~~v~~~-~~~~~~~l-~~~~---~d~~i~iwd~~~~~~~~~~~ 148 (162)
+..|.+||+.+++.+..+... ......+ +++++..+ ++-. .++.|.+||+.+++..+.+.
T Consensus 90 ~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 90 KSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp TSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT
T ss_pred CCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec
Confidence 589999999988766655422 2345788 99865444 4444 57899999998877655543
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.85 E-value=1.3e-06 Score=57.54 Aligned_cols=133 Identities=8% Similarity=-0.038 Sum_probs=89.9
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
....++++.++++.+++...++.|.+ ++... ... .+.+... ...+.++++++++.++++...++.|.
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~--~~~~~-~~~-~~~~~~~---------~~~~~~i~~~~~g~l~v~~~~~~~v~ 86 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISS--LDQSG-RIK-EFEVPTP---------DAKVMCLIVSSLGDIWFTENGANKIG 86 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEE--ECTTS-CEE-EEECSST---------TCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEE--ECCCC-ceE-EEECCCC---------CCcceeEEECCCCCEEEEecCCCeEE
Confidence 45678999999998887777788888 44432 111 1111111 12588999999999888887789999
Q ss_pred EEeCCCccceeeee--ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee-eccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLCQFH--RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ-FHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~v~~~pd 162 (162)
.+|.. ++. ..+. .....+..+ ++++|+++++...++.|..+|.. ++.... +......+.++++.|+
T Consensus 87 ~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 87 KLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp EECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred EECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 99987 543 2222 233567788 99999988888778899999987 544322 2223446777877664
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.85 E-value=2.2e-07 Score=64.75 Aligned_cols=132 Identities=8% Similarity=0.013 Sum_probs=82.9
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC--eE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG--YV 92 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~--~v 92 (162)
....|+++++++.+++...++.|++ ++... ........... ... ++|+|+++.|+++..++ .|
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~--id~~~--g~~~~~~~~~~----------~~~-ia~~~~g~~l~~~d~~~~~~I 196 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRL--ISVDD--NKVTTVHPGFK----------GGK-PAVTKDKQRVYSIGWEGTHTV 196 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEE--EETTT--TEEEEEEETCC----------BCB-CEECTTSSEEEEEBSSTTCEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEE--EECCC--CEEEEeeccCC----------CCc-eeEecCCCcEEEEecCCCceE
Confidence 3567999999987777777788888 45443 12211111111 234 99999998888887755 88
Q ss_pred EEEeCCCccceeee----eecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee----eccCCCce-e-EEEecC
Q psy1859 93 NIWDGFNKKRLCQF----HRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ----FHRYDTGI-T-SLCFSY 161 (162)
Q Consensus 93 ~~wd~~~~~~~~~~----~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~v-~-~v~~~p 161 (162)
.+++...+.....+ ......+..+ ++|+...|+.+..++.|+.||..++..... ..++...- . .++|+|
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYF 276 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEET
T ss_pred EEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeC
Confidence 99988765443333 1133456677 999555555577788999999987653222 11222222 3 888887
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.84 E-value=1.6e-06 Score=57.10 Aligned_cols=134 Identities=6% Similarity=-0.054 Sum_probs=87.9
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+..+++.++++.+++...++.|.. ++... ....+...... ..+.++++.++++++++...++.|.
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~--~d~~g--~~~~~~~~~~~---------~~~~~i~~~~~g~l~v~~~~~~~i~ 128 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGK--LSKKG--GFTEYPLPQPD---------SGPYGITEGLNGDIWFTQLNGDRIG 128 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEE--ECTTS--CEEEEECSSTT---------CCEEEEEECSTTCEEEEETTTTEEE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEE--ECCCC--CeEEecCCCCC---------CCCccceECCCCCEEEEccCCCeEE
Confidence 45678888898887777666777777 55432 11112111111 2588999999999888887788999
Q ss_pred EEeCCCcccee-eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeee-eccCCCceeEEEecCC
Q psy1859 94 IWDGFNKKRLC-QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQ-FHRYDTGITSLCFSYD 162 (162)
Q Consensus 94 ~wd~~~~~~~~-~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~v~~~pd 162 (162)
.+|.. ++... .+......+..+ ++++++++++...++.|..+|. +++.... .......+.+++++++
T Consensus 129 ~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 129 KLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGND 198 (300)
T ss_dssp EECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred EECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCC
Confidence 99987 54332 222234567788 9999997777767889999998 5543321 2223345777777664
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.81 E-value=2.8e-07 Score=68.27 Aligned_cols=128 Identities=9% Similarity=-0.015 Sum_probs=76.4
Q ss_pred cEEEEEEeeCCCeEEEEcC-CCc--EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC-
Q psy1859 15 QTRCIKCFPNKQGYVLSSI-EGR--AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG- 90 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~-~g~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~- 90 (162)
.+..++|||||++++.+.. .|. ..||.+|..++..... . .... ....++|+ +++.|+.++.+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~--~~~~---------k~~~~~Ws-Dg~~l~y~~~~~~ 196 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-P--LKDV---------KFSGISWL-GNEGFFYSSYDKP 196 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-E--EEEE---------ESCCCEEE-TTTEEEEEESSCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-c--cCCc---------eeccEEEe-CCCEEEEEEecCc
Confidence 4667899999999886532 232 3344466554222111 1 1110 13578999 998888877663
Q ss_pred ------------eEEEEeCCCccc----eeeeee-cccceeEE-EcCCCCEEEEec----CCCeEEEEeCCCce-eeeee
Q psy1859 91 ------------YVNIWDGFNKKR----LCQFHR-YDTGITSL-FHQEYNTFATGG----SDGYVNIWDGFNKK-RLCQF 147 (162)
Q Consensus 91 ------------~v~~wd~~~~~~----~~~~~~-~~~~v~~~-~~~~~~~l~~~~----~d~~i~iwd~~~~~-~~~~~ 147 (162)
.|++|++.++.. +..... +......+ |+|||++++... ..+.|+++|+.++. ....+
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l 276 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTV 276 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEE
Confidence 499999987542 222222 33346677 999999886543 23589999997663 33344
Q ss_pred ccCCCcee
Q psy1859 148 HRYDTGIT 155 (162)
Q Consensus 148 ~~~~~~v~ 155 (162)
..+.....
T Consensus 277 ~~~~~~~~ 284 (693)
T 3iuj_A 277 QGDLDADV 284 (693)
T ss_dssp ECSSSSCE
T ss_pred eCCCCceE
Confidence 44444333
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.80 E-value=4.2e-07 Score=62.55 Aligned_cols=112 Identities=10% Similarity=-0.080 Sum_probs=76.2
Q ss_pred EeeCCCeEEEEcC--CC---cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec--------
Q psy1859 21 CFPNKQGYVLSSI--EG---RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-------- 87 (162)
Q Consensus 21 ~~~~~~~l~~~~~--~g---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-------- 87 (162)
..|++++++++.. .. .|.+ +|..+ .+.+..+.... .- .++++|+++.+..+.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v--~D~~t--~~~~~~i~~g~----------~p-~i~~spDg~~lyv~n~~~~~~~r 92 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWV--LDAGS--GSILGHVNGGF----------LP-NPVAAHSGSEFALASTSFSRIAK 92 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEE--EECCC--CeEEEEecCCC----------CC-CeEECCCCCEEEEEecccccccc
Confidence 3467777766653 23 5566 56544 33333322211 23 899999998888775
Q ss_pred --CCCeEEEEeCCCccceeeeeec-------ccceeEE-EcCCCCEEEEecC--CCeEEEEeCCCceeeee-ec
Q psy1859 88 --SDGYVNIWDGFNKKRLCQFHRY-------DTGITSL-FHQEYNTFATGGS--DGYVNIWDGFNKKRLCQ-FH 148 (162)
Q Consensus 88 --~d~~v~~wd~~~~~~~~~~~~~-------~~~v~~~-~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~ 148 (162)
.++.|.+||..+.+.+..+... ......+ |+|||++|++++. ++.|.++| .+++.+.. +.
T Consensus 93 g~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 93 GKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred CCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 3678999999988777666432 1234567 9999999998874 57899999 99988777 54
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.80 E-value=1.2e-06 Score=58.34 Aligned_cols=116 Identities=7% Similarity=-0.008 Sum_probs=79.7
Q ss_pred EEEEEEe----eCCCeEEEE-cCCCcEEEEEecCCcccce---eeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 16 TRCIKCF----PNKQGYVLS-SIEGRAAVEYLDTGPEMQK---MKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 16 ~~~i~~~----~~~~~l~~~-~~~g~i~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
...++++ |+++.++++ ..++.|.+|+.+... ... ....+..+. ...+..++++++|+++++..
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g-~~~~~~~~~~~~~~~--------~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA-KIENKKVWGHIPGTH--------EGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT-EEEEEEEEEECCCCS--------SCEEEEEEEBTTCCEEEEEE
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC-ccccceEEEECCCCC--------CCCCCceEECCCCCEEEEEc
Confidence 4568899 988765554 567888886655211 011 111111110 02467899999999888887
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEE-EEecCCCeEEEEeCCC
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTF-ATGGSDGYVNIWDGFN 140 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l-~~~~~d~~i~iwd~~~ 140 (162)
.++.|.+||..+++.+..+..+...+.++ |+|+++.| ++...++.|..|++..
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 88999999998777766666555778888 99999954 5555678999999864
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.79 E-value=1.2e-07 Score=66.23 Aligned_cols=112 Identities=12% Similarity=0.029 Sum_probs=79.5
Q ss_pred eCCCeEEEEcC-C----CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec----------
Q psy1859 23 PNKQGYVLSSI-E----GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG---------- 87 (162)
Q Consensus 23 ~~~~~l~~~~~-~----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~---------- 87 (162)
++++.++++.. + +.|.+ +|..+ .+.+..+..... + .++++|+++.+.++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsV--ID~~t--~~vv~~I~vG~~---------P--gia~SpDgk~lyVan~~~~~~~~G~ 146 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFV--IDGST--GRILGMTDGGFL---------P--HPVAAEDGSFFAQASTVFERIARGK 146 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEE--EETTT--TEEEEEEEECSS---------C--EEEECTTSSCEEEEEEEEEETTEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEE--EECCC--CEEEEEEECCCC---------C--ceEECCCCCEEEEEeccccccccCC
Confidence 45666555533 2 57777 77766 455544443321 3 899999997776665
Q ss_pred CCCeEEEEeCCCccceeeeeec-------ccceeEE-EcCCCCEEEEecC--CCeEEEEeCCCceeeeeecc
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRY-------DTGITSL-FHQEYNTFATGGS--DGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~-------~~~v~~~-~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~ 149 (162)
.++.|.++|..+.+.+..+... ......+ |+|||++++++.. ++.|.+.|+.+++.+.++..
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 4678999999999888777532 1234456 9999999999874 57899999999988777653
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.78 E-value=1.4e-06 Score=58.05 Aligned_cols=130 Identities=10% Similarity=-0.108 Sum_probs=82.1
Q ss_pred cEEEEEEeeCCC-eEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 15 QTRCIKCFPNKQ-GYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 15 ~~~~i~~~~~~~-~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
......|+|+++ .+++...++.+..| +... ... .+.... ..+..++++++|+++++...++.|.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~--~~~g--~~~--~~~~~~---------~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGW--REDG--TVD--VLLDAT---------AFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEE--ETTS--CEE--EEEESC---------SCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEE--eCCC--CEE--EEeCCC---------CccceeeECCCCCEEEEECCCCEEE
Confidence 346788999998 45566667777774 4422 111 122221 1478999999999877777778999
Q ss_pred EEeCCCccceeeeeec----ccceeEE-EcCCCCEEEE----ecC-------------CCeEEEEeCCCceeeeeeccCC
Q psy1859 94 IWDGFNKKRLCQFHRY----DTGITSL-FHQEYNTFAT----GGS-------------DGYVNIWDGFNKKRLCQFHRYD 151 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~----~~~v~~~-~~~~~~~l~~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~ 151 (162)
+|+.. ++........ ...+..+ ++|+|+++++ |.. .+.|..+|..+++..... ..
T Consensus 111 ~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~ 187 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL 187 (305)
T ss_dssp EECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE
T ss_pred EECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC
Confidence 99986 4432211111 1235678 9999998886 332 256888887666543322 33
Q ss_pred CceeEEEecCC
Q psy1859 152 TGITSLCFSYD 162 (162)
Q Consensus 152 ~~v~~v~~~pd 162 (162)
.....++|+||
T Consensus 188 ~~p~gl~~spd 198 (305)
T 3dr2_A 188 DHPNGLAFSPD 198 (305)
T ss_dssp SSEEEEEECTT
T ss_pred CCCcceEEcCC
Confidence 35678888886
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.73 E-value=1.7e-06 Score=57.66 Aligned_cols=115 Identities=9% Similarity=-0.088 Sum_probs=73.3
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeee-eeeeeeccCcccceeceEEEEecCCCCEEEE----ecC
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYA-FKCHRIKEDGIEKIYPVNAISFHQEYNTFAT----GGS 88 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~----~~~ 88 (162)
..+..++++++|+.+++...++.|.+++.+ . ....... ...... ..+..++++|+|+++++ +..
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g-~~~~~~~~~~~~~~--------~~~~~i~~d~dG~l~~td~~~g~~ 154 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD--G-QAHLLVGRYAGKRL--------NSPNDLIVARDGAIWFTDPPFGLR 154 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT--S-CEEEEECEETTEEC--------SCCCCEEECTTSCEEEECCSGGGS
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC--C-CEEEEEeccCCCcc--------CCCCCEEECCCCCEEEeCcCCCcc
Confidence 456788999999876665556777774433 2 1221111 111111 14678999999998886 432
Q ss_pred -------------CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC------CeEEEEeCCCc
Q psy1859 89 -------------DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD------GYVNIWDGFNK 141 (162)
Q Consensus 89 -------------d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d------~~i~iwd~~~~ 141 (162)
.+.|..+|..+++..... .......+ |+|+++.|+.+... +.|.+|++..+
T Consensus 155 ~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 155 KPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp CGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred ccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 356888887666543332 33445678 99999988777654 68999998654
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.72 E-value=8.6e-07 Score=58.94 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=73.3
Q ss_pred EEEEEEeeCCCeEEE-EcCCCcEEEEEecCCcccce---eeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 16 TRCIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEMQK---MKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
...++|+|+++.++. .+.++.|.+|+++..++... ....+.. +......++++++|++.++....+.
T Consensus 151 pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~---------~~~~p~g~~~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 151 SNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK---------EEQIPDGMCIDAEGKLWVACYNGGR 221 (297)
T ss_dssp EEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG---------GGCEEEEEEEBTTSCEEEEEETTTE
T ss_pred ccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC---------CCCCCCeeEECCCCCEEEEEcCCCE
Confidence 356899999987654 46678888877764432111 1111111 1124678999999998888888899
Q ss_pred EEEEeCCCccceeeeeecccceeEE-Ec-CCCCEEEEec
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FH-QEYNTFATGG 128 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~-~~~~~l~~~~ 128 (162)
|..||..+++.+..+......++++ |. |+++.|+.++
T Consensus 222 v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred EEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 9999999888888887666778889 98 8887665554
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.70 E-value=4.4e-06 Score=57.52 Aligned_cols=76 Identities=9% Similarity=0.037 Sum_probs=60.2
Q ss_pred eEEEEecCCCCEEEEecC----------CCeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEec-CCCeEEEEe
Q psy1859 71 VNAISFHQEYNTFATGGS----------DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGG-SDGYVNIWD 137 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~----------d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~-~d~~i~iwd 137 (162)
...++++|+++.+.+... .+.|.++|..+++.+..+.. ......+ |+|||+ +++++. .++.|.++|
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 445788999866665432 36899999999998888853 3457788 999999 777777 589999999
Q ss_pred CCCceeeeee
Q psy1859 138 GFNKKRLCQF 147 (162)
Q Consensus 138 ~~~~~~~~~~ 147 (162)
+.+++.+.++
T Consensus 348 ~~t~~vv~~i 357 (373)
T 2mad_H 348 AGAGDQDQST 357 (373)
T ss_pred CCCCCEEeee
Confidence 9999988774
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.70 E-value=1.6e-06 Score=59.75 Aligned_cols=90 Identities=16% Similarity=0.165 Sum_probs=68.3
Q ss_pred eEEEEecCCCCEEEEecC----------CCeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEe-cCCCeEEEEe
Q psy1859 71 VNAISFHQEYNTFATGGS----------DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATG-GSDGYVNIWD 137 (162)
Q Consensus 71 v~~~~~~p~~~~l~~~~~----------d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~-~~d~~i~iwd 137 (162)
...++++|+++.+..... .+.|.+.|+.+++.+..+... ..+..+ +++|++ +|+++ ..++.|.++|
T Consensus 282 ~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 282 WQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp SSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEE
T ss_pred cceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 445777998866665432 267999999999999888643 467788 999997 66665 4589999999
Q ss_pred CCCceeeeeeccCCCceeEEEecCC
Q psy1859 138 GFNKKRLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 138 ~~~~~~~~~~~~~~~~v~~v~~~pd 162 (162)
..+++.+.++... +....+.+++|
T Consensus 361 ~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 361 AESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp TTTCCEEEEECCC-CSSCCEEEECC
T ss_pred CCCCcEEEEecCC-CCCceeEECCc
Confidence 9999999888643 34566777776
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.68 E-value=7.2e-06 Score=55.28 Aligned_cols=115 Identities=10% Similarity=-0.040 Sum_probs=69.2
Q ss_pred cccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC----
Q psy1859 13 KFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS---- 88 (162)
Q Consensus 13 ~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~---- 88 (162)
...+.+++++++++++++. .++ +.+ ++..++........... .....+..++++|+|+++++...
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~g-l~~--~d~~~g~~~~~~~~~~~-------~~~~~~~~i~~d~~G~l~v~~~~~~~~ 157 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DDG-LFL--RDTATGVLTLHAELESD-------LPGNRSNDGRMHPSGALWIGTMGRKAE 157 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTE-EEE--EETTTCCEEEEECSSTT-------CTTEEEEEEEECTTSCEEEEEEETTCC
T ss_pred CCcceEEEEeCCCeEEEEE-CCC-EEE--EECCCCcEEEEeeCCCC-------CCCCCCCCEEECCCCCEEEEeCCCcCC
Confidence 4567889999999877664 333 555 55443222222111000 01125889999999987765542
Q ss_pred --CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEe-cCCCeEEEEeCC--Cc
Q psy1859 89 --DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATG-GSDGYVNIWDGF--NK 141 (162)
Q Consensus 89 --d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~-~~d~~i~iwd~~--~~ 141 (162)
.+.|..++ +++. ..+.........+ |+|+++.++.+ ..++.|.+||+. ++
T Consensus 158 ~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 158 TGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp TTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred CCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 35666666 4433 2232233345677 99999876555 567899999985 55
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.67 E-value=3.1e-06 Score=58.93 Aligned_cols=137 Identities=6% Similarity=-0.051 Sum_probs=83.9
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeee--eeeeeeccCcccceeceEEEEecCC-CCEEEEecCCC
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYA--FKCHRIKEDGIEKIYPVNAISFHQE-YNTFATGGSDG 90 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~d~ 90 (162)
.....++++|++..|+++..++.|.. ++........... ..+... ..+...++|+|+ +.++++-..++
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~~~I~~--~d~~~~~~~~~~~~~~~g~~~-------~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSNKNFGR--FNVKTQEVTLIKQLELSGSLG-------TNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTTCEEEE--EETTTCCEEEEEECCCCSCCC-------CSSCCEEEEETTTTEEEEEETTTT
T ss_pred CCcEEEEEeCCCCeEEEEECCCcEEE--EECCCCCEEEEecccccCCCC-------CCccccEEEeCCCCEEEEEeCCCC
Confidence 44567899995555555666777776 4543311111100 011100 001238999995 67777777889
Q ss_pred eEEEEeCCCccceeeeeecc---------------cceeEE-EcCCCCEEEEec-CCCeEEEEeCCCceeeeeeccC---
Q psy1859 91 YVNIWDGFNKKRLCQFHRYD---------------TGITSL-FHQEYNTFATGG-SDGYVNIWDGFNKKRLCQFHRY--- 150 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~---------------~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~--- 150 (162)
.|+.|+.... +..+.+.. .....+ ++|+|+++++-. .++.|+.|++.++.. .++.++
T Consensus 290 ~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~ 366 (409)
T 3hrp_A 290 SVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDV 366 (409)
T ss_dssp EEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTC
T ss_pred EEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCC
Confidence 9999997643 22222221 236678 999999878777 889999999877763 333333
Q ss_pred ------------CCceeEEEecCC
Q psy1859 151 ------------DTGITSLCFSYD 162 (162)
Q Consensus 151 ------------~~~v~~v~~~pd 162 (162)
-.....++++||
T Consensus 367 ~g~~~g~~~~~~~~~P~giavd~~ 390 (409)
T 3hrp_A 367 ASQIDGTPLEATFNYPYDICYDGE 390 (409)
T ss_dssp BSCCCBSTTTCCBSSEEEEEECSS
T ss_pred CCcCCCChhceEeCCceEEEEcCC
Confidence 135778888875
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.65 E-value=1.8e-06 Score=63.94 Aligned_cols=133 Identities=12% Similarity=0.053 Sum_probs=77.8
Q ss_pred EEEEEeeCCCeEEEEcCCCc-------------EEEEEecCCcccceeeeeeee-eeeccCcccceeceEEEEecCCCCE
Q psy1859 17 RCIKCFPNKQGYVLSSIEGR-------------AAVEYLDTGPEMQKMKYAFKC-HRIKEDGIEKIYPVNAISFHQEYNT 82 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g~-------------i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ 82 (162)
..++|+ |++.|+.++.+.. |.+|++.........++.... +. ..+.++.|+|+++.
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~---------~~~~~~~~SpDg~~ 247 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQH---------HRYVGATVTEDDRF 247 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGC---------CSEEEEEECTTSCE
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCC---------eEEEEEEEcCCCCE
Confidence 357899 9999988877643 555444433322233333222 22 13678999999987
Q ss_pred EEEec----CCCeEEEEeCCCcc-ceeeeeecccceeEEEcCCCCEE-EEecCC---CeEEEEeCCCcee--eeeeccCC
Q psy1859 83 FATGG----SDGYVNIWDGFNKK-RLCQFHRYDTGITSLFHQEYNTF-ATGGSD---GYVNIWDGFNKKR--LCQFHRYD 151 (162)
Q Consensus 83 l~~~~----~d~~v~~wd~~~~~-~~~~~~~~~~~v~~~~~~~~~~l-~~~~~d---~~i~iwd~~~~~~--~~~~~~~~ 151 (162)
|+... .+..++++|+.++. ....+..+.......++++|..| +.+..+ +.|..+|+.++.. ...+..|.
T Consensus 248 l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 327 (693)
T 3iuj_A 248 LLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPER 327 (693)
T ss_dssp EEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred EEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCC
Confidence 65432 23589999998763 34455444444444355655554 444443 6899999987653 23444555
Q ss_pred CceeEEEecC
Q psy1859 152 TGITSLCFSY 161 (162)
Q Consensus 152 ~~v~~v~~~p 161 (162)
..+. .|+|
T Consensus 328 ~~~~--~~s~ 335 (693)
T 3iuj_A 328 QQVL--TVHS 335 (693)
T ss_dssp SSCE--EEEE
T ss_pred CCEE--EEEE
Confidence 4443 5544
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.64 E-value=1.9e-06 Score=60.20 Aligned_cols=74 Identities=12% Similarity=0.167 Sum_probs=59.9
Q ss_pred EEEecCCCCEEEEecC----------CCeEEEEeCCCccceeeeeecccceeEE-EcCCCC-EEEEec-CCCeEEEEeCC
Q psy1859 73 AISFHQEYNTFATGGS----------DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYN-TFATGG-SDGYVNIWDGF 139 (162)
Q Consensus 73 ~~~~~p~~~~l~~~~~----------d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~-~d~~i~iwd~~ 139 (162)
.++++|++..+.+... .+.|.+.|..+.+.+.++... .....+ |+|||+ ++++.. .++.|.++|+.
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 4789999865555431 357999999999999888643 357778 999999 888887 58999999999
Q ss_pred Cceeeeee
Q psy1859 140 NKKRLCQF 147 (162)
Q Consensus 140 ~~~~~~~~ 147 (162)
+++.+.++
T Consensus 402 t~kvv~tI 409 (426)
T 3c75_H 402 TGEELRSV 409 (426)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEEe
Confidence 99998887
No 222
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.59 E-value=7.4e-06 Score=53.71 Aligned_cols=118 Identities=8% Similarity=0.002 Sum_probs=77.5
Q ss_pred EEEEEEeeCCCeEEEEcC--CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 16 TRCIKCFPNKQGYVLSSI--EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~--~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..-+.+++++..+++.+. ++.|.+ +|..+ .+....+...... ....+++.. +++.++...++.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~--iD~~t--g~v~~~i~l~~~~--------fgeGi~~~g-~~lyv~t~~~~~v~ 89 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQ--VALQT--GKVENIHKMDDSY--------FGEGLTLLN-EKLYQVVWLKNIGF 89 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEE--EETTT--CCEEEEEECCTTC--------CEEEEEEET-TEEEEEETTCSEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEE--EECCC--CCEEEEEecCCCc--------ceEEEEEeC-CEEEEEEecCCEEE
Confidence 467899998755555443 466777 67665 3333332211110 234566653 35666666889999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
++|..+.+.+.++...... .. +++||+.++++..++.|.+.|..+.+.+..+.
T Consensus 90 viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp EEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 9999999888887633111 23 57788888888888999999999887766654
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.53 E-value=1e-05 Score=56.72 Aligned_cols=137 Identities=9% Similarity=0.110 Sum_probs=84.7
Q ss_pred eCCCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC------CeEEEE
Q psy1859 23 PNKQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD------GYVNIW 95 (162)
Q Consensus 23 ~~~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d------~~v~~w 95 (162)
+++++|++ +..++.|.+.+........+....+...... ...-......+...|+| +++++..+ +.|.+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~--~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVK--KVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHH--HHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcc--cccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Confidence 66777665 5666889985443222112333222100000 00000135667888999 77766555 789999
Q ss_pred eCCCccceeeeeeccc---ceeEE-EcCCCCEEEEec-------------------CCCeEEEEeCCCceeeeeeccC-C
Q psy1859 96 DGFNKKRLCQFHRYDT---GITSL-FHQEYNTFATGG-------------------SDGYVNIWDGFNKKRLCQFHRY-D 151 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~---~v~~~-~~~~~~~l~~~~-------------------~d~~i~iwd~~~~~~~~~~~~~-~ 151 (162)
|..+.+.+.++..... ....+ |+|+++.++++. .+.+|.+||+.+++.+.++... .
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 9999888887763322 24457 899999998885 3689999999988888777642 1
Q ss_pred -CceeEEEe--cCC
Q psy1859 152 -TGITSLCF--SYD 162 (162)
Q Consensus 152 -~~v~~v~~--~pd 162 (162)
.....+.| +||
T Consensus 250 g~~P~~i~f~~~Pd 263 (462)
T 2ece_A 250 NRMALELRPLHDPT 263 (462)
T ss_dssp EEEEEEEEECSSTT
T ss_pred CCccceeEeeECCC
Confidence 23445555 664
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.49 E-value=8.8e-06 Score=55.92 Aligned_cols=86 Identities=7% Similarity=-0.019 Sum_probs=64.9
Q ss_pred EEecCCCCEEEEecC---------CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCE-EEEec-CCCeEEEEeCCCc
Q psy1859 74 ISFHQEYNTFATGGS---------DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNT-FATGG-SDGYVNIWDGFNK 141 (162)
Q Consensus 74 ~~~~p~~~~l~~~~~---------d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~-l~~~~-~d~~i~iwd~~~~ 141 (162)
++++|+++.+..+.. ++.+.++|+.+.+.+..+.... ....+ |+|||++ +++.. .++.|.++|+.++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 789999876665422 2356699999999888886443 57788 9999984 55555 5899999999999
Q ss_pred eeeeeeccCCCceeEEEecC
Q psy1859 142 KRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 142 ~~~~~~~~~~~~v~~v~~~p 161 (162)
+.+.++.... ....+++.+
T Consensus 348 kvv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 348 QDQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp EEEEECCCCS-CCCEEECCC
T ss_pred cEEEEEECCC-CCCEEEeec
Confidence 9998887544 456677654
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.48 E-value=2.3e-08 Score=68.67 Aligned_cols=111 Identities=14% Similarity=0.158 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
++..+++++.||.+.. ||..+ .+....+.. . .+.+..+..++..+++++.|+.|+.||..+++.+
T Consensus 8 ~~~~v~~gs~dg~v~a--~d~~t--G~~~W~~~~-~----------~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHA--VSKRT--GSIKWTLKE-D----------PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL 72 (369)
T ss_dssp CTTEEEEEETTSEEEE--EETTT--CCEEEEEEC-C----------CSCCCC-----CCEEECTTTCCEEEC-----CCS
T ss_pred eCCEEEEEcCCCEEEE--EECCC--CCEEEEecC-C----------CceecceEcCCCEEEEeCCCCEEEEEECCCCcee
Confidence 4678889999999888 56555 444444443 1 2444444566778888889999999999888776
Q ss_pred eeeeeccc-ceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 104 CQFHRYDT-GITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 104 ~~~~~~~~-~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
..+..+.. .+... .-.++..+++++.++.++.||.++|+.+..+..
T Consensus 73 w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~ 120 (369)
T 2hz6_A 73 TKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSS 120 (369)
T ss_dssp EECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC----------
T ss_pred eeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecC
Confidence 55432211 11111 111344667777788888888888877666543
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.41 E-value=4.1e-07 Score=62.46 Aligned_cols=105 Identities=11% Similarity=0.048 Sum_probs=58.7
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCcccee
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~ 104 (162)
+..+++++.++.+.. +|..+ .+....+..+. ...++|++..+++++.++.|..||.++++.+.
T Consensus 92 ~~~v~~g~~dg~v~a--~D~~t--G~~~w~~~~~~-------------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 92 DGILYMGKKQDIWYV--IDLLT--GEKQQTLSSAF-------------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp ---CCCCEEEEEEEE--ECCC-------------------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred CCEEEEEeCCCEEEE--EECCC--CcEEEEecCCC-------------cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 344566666777766 55554 33333332221 13456677888899999999999999998776
Q ss_pred eeeecccceeEE-EcCCC---CEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 105 QFHRYDTGITSL-FHQEY---NTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 105 ~~~~~~~~v~~~-~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
.+.... .... ++++. ..+++++.++.|..||.++++.+..+.
T Consensus 155 ~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 155 NATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred eEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 654321 1222 44432 567778899999999999999887765
No 227
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.41 E-value=1.6e-05 Score=59.53 Aligned_cols=115 Identities=13% Similarity=0.038 Sum_probs=69.6
Q ss_pred cEEEEEEe-eCCCeEEEEcC-CCc--EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC-
Q psy1859 15 QTRCIKCF-PNKQGYVLSSI-EGR--AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD- 89 (162)
Q Consensus 15 ~~~~i~~~-~~~~~l~~~~~-~g~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d- 89 (162)
.+...+|| |||++++.+.. +|. ..||.++..++. +.... .. . .....++|+|+++.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~-~~l~~-~~-~---------~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS-QTIAD-KV-S---------GTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT-CCCCC-CE-E---------EECSCCEECSSTTEEEEEEECT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC-EeCCc-cc-c---------CceeeEEEecCCCEEEEEEECC
Confidence 45678999 99998887643 232 234446655420 11100 00 1 024578999999877766554
Q ss_pred ----CeEEEEeCCCccce--eeeee-cccceeEE-EcCCCCEEEEec---CCCeEEEEeCCCc
Q psy1859 90 ----GYVNIWDGFNKKRL--CQFHR-YDTGITSL-FHQEYNTFATGG---SDGYVNIWDGFNK 141 (162)
Q Consensus 90 ----~~v~~wd~~~~~~~--~~~~~-~~~~v~~~-~~~~~~~l~~~~---~d~~i~iwd~~~~ 141 (162)
..|+++++.++... ..+.. .......+ |+|||++|+... ....|.++|+.++
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 36888888765422 22221 22344567 999999887765 3457888999765
No 228
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.41 E-value=3.3e-05 Score=50.47 Aligned_cols=116 Identities=6% Similarity=-0.009 Sum_probs=77.3
Q ss_pred EEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 16 TRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+..+.++ ++..+.+++.+|.|++ +|..+ .+....+ .... ..-..+++.. +++++....++.+.+|
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~--iD~~T--gkv~~~~-l~~~--------~FgeGit~~g-~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQ--LSLES--AQPVWME-RLGN--------IFAEGLASDG-ERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEE--CCSSC--SSCSEEE-ECTT--------CCEEEEEECS-SCEEEEESSSCEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEE--EECCC--CcEEeEE-CCCC--------cceeEEEEeC-CEEEEEEccCCEEEEE
Confidence 3456776 3566667788888877 77766 3333332 1111 0123455543 3566666789999999
Q ss_pred eCCCccceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 96 DGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
|..+.+.+.++..... -.. +.++++.|+.+..++.|.++|..+.+.+.++.
T Consensus 122 D~~Tl~~~~ti~~~~e-GwG-Lt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 122 SGMPPQRERTTRYSGE-GWG-LCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp ETTTTEEEEEEECSSC-CCC-EEEETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred ECCcCcEEEEEeCCCc-eeE-EecCCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 9999999888874322 112 45678888888889999999999988766654
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.38 E-value=2.4e-05 Score=54.86 Aligned_cols=114 Identities=12% Similarity=0.112 Sum_probs=74.6
Q ss_pred EEEEEeeCCCeEEEEcCC------CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec---
Q psy1859 17 RCIKCFPNKQGYVLSSIE------GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG--- 87 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~--- 87 (162)
..+.+.|+| .++++..+ |.+.+ +|..+ .+.+......... ...-..+.|+|+++.+++..
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~v--lD~~T--~~v~~~~~~~~~~------~~~~Yd~~~~p~~~~mvsS~wg~ 209 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILM--LDHYS--FEPLGKWEIDRGD------QYLAYDFWWNLPNEVLVSSEWAV 209 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEE--ECTTT--CCEEEECCSBCTT------CCCCCCEEEETTTTEEEECBCCC
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEE--EECCC--CeEEEEEccCCCC------ccccceEEECCCCCEEEEccCcC
Confidence 457788999 77766554 56777 77665 3333333211110 01234688899999888884
Q ss_pred ----------------CCCeEEEEeCCCccceeeeeec--ccceeEE---EcCCCCEEEEecC------CCeEEEEeCCC
Q psy1859 88 ----------------SDGYVNIWDGFNKKRLCQFHRY--DTGITSL---FHQEYNTFATGGS------DGYVNIWDGFN 140 (162)
Q Consensus 88 ----------------~d~~v~~wd~~~~~~~~~~~~~--~~~v~~~---~~~~~~~l~~~~~------d~~i~iwd~~~ 140 (162)
.+..|.+||+.+++.+.++... ......+ |+|+++++++++. +++|.+|....
T Consensus 210 p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 210 PNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp HHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred ccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence 4789999999988777777642 1234444 5999999888774 56787766544
Q ss_pred c
Q psy1859 141 K 141 (162)
Q Consensus 141 ~ 141 (162)
+
T Consensus 290 g 290 (462)
T 2ece_A 290 G 290 (462)
T ss_dssp T
T ss_pred C
Confidence 4
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.36 E-value=2.5e-05 Score=50.92 Aligned_cols=115 Identities=11% Similarity=0.065 Sum_probs=74.3
Q ss_pred EEEEEeeCCCeEEEEcCCC--cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 17 RCIKCFPNKQGYVLSSIEG--RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
.-+.++ ++..+.+++.+| .|++ +|..+ .+....+..... ..-..++... +++.+....++.+.+
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~--vD~~T--gkv~~~~~l~~~--------~FgeGit~~g-~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRK--VDIES--GKTLQQIELGKR--------YFGEGISDWK-DKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEE--ECTTT--CCEEEEEECCTT--------CCEEEEEEET-TEEEEEESSSSEEEE
T ss_pred ceEEEE-CCEEEEECCCCCCceEEE--EECCC--CcEEEEEecCCc--------cceeEEEEeC-CEEEEEEeeCCEEEE
Confidence 557777 666666666666 5666 77766 333333322211 0122344432 245555567899999
Q ss_pred EeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 95 WDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 95 wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
+|..+.+.+.++.... ... ++++++.|+.+..++.|.++|..+.+.+.++.
T Consensus 112 ~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp EETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred EECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 9999999988887432 223 56678888888778899999999887666654
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.36 E-value=0.00014 Score=47.47 Aligned_cols=133 Identities=10% Similarity=-0.018 Sum_probs=79.5
Q ss_pred cEEEEEEeeCCCeEEEEcC---CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCC
Q psy1859 15 QTRCIKCFPNKQGYVLSSI---EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDG 90 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~---~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~ 90 (162)
....++++|++..+..+.. .+.|..++.+... .+.... . .. .....++++|++ .++++-...+
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~--~~~~~~--~-~~--------~~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN--RRILAQ--D-NL--------GLPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC--CEEEEC--T-TC--------SCEEEEEEETTTTEEEEEETTTT
T ss_pred CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC--cEEEEE--C-CC--------CCCcEEEEcCCCCEEEEEECCCC
Confidence 4567899996555554443 3566664444322 221111 0 00 146789999976 4556666778
Q ss_pred eEEEEeCCCccceeeeeecccceeEEEcCCCCEEEEe-cCCCeEEEEeCCCceeeeeeccCC-CceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATG-GSDGYVNIWDGFNKKRLCQFHRYD-TGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~pd 162 (162)
.|..+|.........+. .......+ .+++..++.+ ...+.|..+|..+++.+.++.... .....+++.||
T Consensus 190 ~I~~~~~~g~~~~~~~~-~~~~P~gi-~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 190 RAECLNPAQPGRRKVLE-GLQYPFAV-TSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EEEEEETTEEEEEEEEE-CCCSEEEE-EEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EEEEEecCCCceEEEec-CCCCceEE-EEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence 99999997543333222 22223445 2234455544 466899999999998888776433 24778888875
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.35 E-value=1.9e-06 Score=59.16 Aligned_cols=90 Identities=8% Similarity=-0.082 Sum_probs=65.4
Q ss_pred cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec----------CCCeEEEEeCCCccceee
Q psy1859 36 RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG----------SDGYVNIWDGFNKKRLCQ 105 (162)
Q Consensus 36 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~----------~d~~v~~wd~~~~~~~~~ 105 (162)
.+.+ +|..+ .+.+..+..... + .++++|+++.+.++. .++.|.+||+.+++.+.+
T Consensus 47 ~vsv--ID~~t--~~v~~~i~vG~~---------P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 47 ENWV--SCAGC--GVTLGHSLGAFL---------S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEE--EETTT--TEEEEEEEECTT---------C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred eEEE--EECCC--CeEEEEEeCCCC---------C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 5666 77666 455544443321 4 799999997777665 478999999999999888
Q ss_pred eeec-------ccceeEE-EcCCCCEEEEecC--CCeEEE--EeCCC
Q psy1859 106 FHRY-------DTGITSL-FHQEYNTFATGGS--DGYVNI--WDGFN 140 (162)
Q Consensus 106 ~~~~-------~~~v~~~-~~~~~~~l~~~~~--d~~i~i--wd~~~ 140 (162)
+... ......+ ++|||++++++.. +..+.+ +|..+
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 8643 1235567 9999999998864 467888 89865
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.35 E-value=1.6e-05 Score=58.94 Aligned_cols=62 Identities=15% Similarity=0.139 Sum_probs=48.5
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY 150 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 150 (162)
+|.|..||+.+++.+..+..+.......+...+.++++++.|+.++.||.++|+.+.++...
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 37899999999998877765432222125667889999999999999999999999888644
No 234
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.33 E-value=4.6e-05 Score=51.66 Aligned_cols=93 Identities=10% Similarity=-0.006 Sum_probs=59.7
Q ss_pred ceEEEEecCCCCEEEEecCCC-eEEEEeCC---Cc-----cceee--eeecccceeEE-EcCCCCEEEEecCCCeEEEEe
Q psy1859 70 PVNAISFHQEYNTFATGGSDG-YVNIWDGF---NK-----KRLCQ--FHRYDTGITSL-FHQEYNTFATGGSDGYVNIWD 137 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~-~v~~wd~~---~~-----~~~~~--~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd 137 (162)
.+..|+|+|+++.|..+..++ .+..++.. .+ +.... ..++......+ ++++|.++++...++.|.+||
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 468899999998777766554 55555532 11 11111 11233345567 999999999988999999999
Q ss_pred CCCceeeeeecc-CCCceeEEEecCC
Q psy1859 138 GFNKKRLCQFHR-YDTGITSLCFSYD 162 (162)
Q Consensus 138 ~~~~~~~~~~~~-~~~~v~~v~~~pd 162 (162)
..+++....... +-..+.+++|.||
T Consensus 276 ~~~G~~~~~~~~~~~~~p~~va~~~~ 301 (343)
T 2qe8_A 276 SADRAYKLLVTDEKLSWTDSFNFGSD 301 (343)
T ss_dssp TTTTEEEEEEECGGGSCEEEEEECTT
T ss_pred CCCCCEEEEEECCceecCCeeEECCC
Confidence 856654322222 2346788998765
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.31 E-value=0.00013 Score=47.88 Aligned_cols=122 Identities=6% Similarity=-0.018 Sum_probs=78.0
Q ss_pred CCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 25 KQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 25 ~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
++.+..+ -.++.+.+ +|..+ .+.+.++... . -....++++++.++++..++.|.++|..+.+.+
T Consensus 75 g~~lyv~t~~~~~v~v--iD~~t--~~v~~~i~~g-~----------~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFI--YDRRT--LSNIKNFTHQ-M----------KDGWGLATDGKILYGSDGTSILYEIDPHTFKLI 139 (266)
T ss_dssp TTEEEEEETTCSEEEE--EETTT--TEEEEEEECC-S----------SSCCEEEECSSSEEEECSSSEEEEECTTTCCEE
T ss_pred CCEEEEEEecCCEEEE--EECCC--CcEEEEEECC-C----------CCeEEEEECCCEEEEECCCCeEEEEECCCCcEE
Confidence 4444444 45577777 66655 4444443322 1 112335667765666667899999999998877
Q ss_pred eeeeecc--c---ceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-------------CCceeEEEecCC
Q psy1859 104 CQFHRYD--T---GITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY-------------DTGITSLCFSYD 162 (162)
Q Consensus 104 ~~~~~~~--~---~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------------~~~v~~v~~~pd 162 (162)
..+.... . ....+ |. +|+.++....++.|.+-|..+++.+..+... ......|+|+|+
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~ 216 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE 216 (266)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred EEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC
Confidence 7765322 2 24466 77 6765555557889999999999988877531 124578999885
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.30 E-value=0.00012 Score=47.74 Aligned_cols=124 Identities=9% Similarity=-0.001 Sum_probs=77.9
Q ss_pred eeCCCeEEEEc-CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 22 FPNKQGYVLSS-IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNK 100 (162)
Q Consensus 22 ~~~~~~l~~~~-~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~ 100 (162)
.++++.+...+ .++.+.+ +|..+ .+.+.++.... ....+++++..|+.+..++.|.++|..+.
T Consensus 93 t~~g~~ly~ltw~~~~v~v--~D~~t--~~~~~ti~~~~------------eG~glt~dg~~L~~SdGs~~i~~iDp~T~ 156 (262)
T 3nol_A 93 SDWKDKIVGLTWKNGLGFV--WNIRN--LRQVRSFNYDG------------EGWGLTHNDQYLIMSDGTPVLRFLDPESL 156 (262)
T ss_dssp EEETTEEEEEESSSSEEEE--EETTT--CCEEEEEECSS------------CCCCEEECSSCEEECCSSSEEEEECTTTC
T ss_pred EEeCCEEEEEEeeCCEEEE--EECcc--CcEEEEEECCC------------CceEEecCCCEEEEECCCCeEEEEcCCCC
Confidence 33455555444 4566666 66655 34443333211 12333456766666666889999999998
Q ss_pred cceeeeeec--ccc---eeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC------------CCceeEEEecCC
Q psy1859 101 KRLCQFHRY--DTG---ITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY------------DTGITSLCFSYD 162 (162)
Q Consensus 101 ~~~~~~~~~--~~~---v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------~~~v~~v~~~pd 162 (162)
+.+..+... ..+ +..+ |. +|+..+..-.+..|.+.|.++++.+..+... ....+.|+|+|+
T Consensus 157 ~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 157 TPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp SEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred eEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 877776542 223 3345 65 6766666667889999999999987776531 124578999885
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.29 E-value=1.8e-05 Score=58.61 Aligned_cols=60 Identities=15% Similarity=0.180 Sum_probs=47.8
Q ss_pred CeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC
Q psy1859 90 GYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY 150 (162)
Q Consensus 90 ~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 150 (162)
+.|..||+.+++.+..+.. ..+.... +..++.++++++.|+.+++||.++++.+..+...
T Consensus 457 g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 7899999999988877753 2333334 6667888999999999999999999998888643
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.24 E-value=7.7e-05 Score=54.06 Aligned_cols=132 Identities=8% Similarity=0.001 Sum_probs=83.4
Q ss_pred cEEEEEE-e-eCCCeEEEEc------------------CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEE
Q psy1859 15 QTRCIKC-F-PNKQGYVLSS------------------IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAI 74 (162)
Q Consensus 15 ~~~~i~~-~-~~~~~l~~~~------------------~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 74 (162)
....+++ . |+++++++++ .++.+.+ +|..+ .+...++.-... ...+
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv--ID~~t--~~v~~qI~Vgg~----------pd~~ 200 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA--VDADK--WEVAWQVLVSGN----------LDNC 200 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE--EETTT--TEEEEEEEESSC----------CCCE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE--EECCC--CeEEEEEEeCCC----------ccce
Confidence 3456776 4 8999988874 2345666 55554 444444332111 3567
Q ss_pred EecCCCCEEEEecCCC--------------------------------------eEEEEeCCC--ccc-eeeeeecccce
Q psy1859 75 SFHQEYNTFATGGSDG--------------------------------------YVNIWDGFN--KKR-LCQFHRYDTGI 113 (162)
Q Consensus 75 ~~~p~~~~l~~~~~d~--------------------------------------~v~~wd~~~--~~~-~~~~~~~~~~v 113 (162)
+++|+|+++++.+.+. .|.+.|.++ ++. +..+.. ....
T Consensus 201 ~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~P 279 (595)
T 1fwx_A 201 DADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNP 279 (595)
T ss_dssp EECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSC
T ss_pred EECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCc
Confidence 7899998877766442 366777776 434 344443 3455
Q ss_pred eEE-EcCCCCEEEEec-CCCeEEEEeCCCce------------eeeeeccCCCceeEEEecCC
Q psy1859 114 TSL-FHQEYNTFATGG-SDGYVNIWDGFNKK------------RLCQFHRYDTGITSLCFSYD 162 (162)
Q Consensus 114 ~~~-~~~~~~~l~~~~-~d~~i~iwd~~~~~------------~~~~~~~~~~~v~~v~~~pd 162 (162)
..+ ++|||+++++++ .+.+|.++|+.+.+ .+.... -......++|+||
T Consensus 280 hGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~d 341 (595)
T 1fwx_A 280 HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGR 341 (595)
T ss_dssp CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTT
T ss_pred eEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCC
Confidence 677 999999877766 67899999998652 233332 3346788888886
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.21 E-value=0.00012 Score=47.30 Aligned_cols=119 Identities=8% Similarity=-0.038 Sum_probs=75.2
Q ss_pred ccEEEEEEeeCCCeEEEEcCCC--cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCe
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEG--RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 91 (162)
.-+.-+.|+. +..+.+++.+| .++. +|..+ .+........... .-..++... +++++....++.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~--vD~~t--gkv~~~~~l~~~~--------fgeGi~~~~-~~ly~ltw~~~~ 86 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRK--VDLET--GRILQRAEVPPPY--------FGAGIVAWR-DRLIQLTWRNHE 86 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEE--EETTT--CCEEEEEECCTTC--------CEEEEEEET-TEEEEEESSSSE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEE--EECCC--CCEEEEEeCCCCc--------ceeEEEEeC-CEEEEEEeeCCE
Confidence 3345677876 55556666654 6666 66665 3333332222110 123344432 355556668899
Q ss_pred EEEEeCCCccceeeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
+.+||..+.+.+.++...... .. +.++++.|+.+..++.|.++|..+.+.+.++.
T Consensus 87 v~v~D~~tl~~~~ti~~~~~G-wg-lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEG-WA-LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCC-CE-EEECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEECCcCcEEEEEeCCCCc-eE-EeeCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 999999999998888743222 22 45677878888889999999999887766654
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.19 E-value=0.00036 Score=45.43 Aligned_cols=135 Identities=7% Similarity=-0.133 Sum_probs=77.4
Q ss_pred ccEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCe
Q psy1859 14 FQTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGY 91 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~ 91 (162)
.+...+++++++..++.+ ...+.|..++.+... ..... .. .. .....++++|++ .++++-...+.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~--~~~~~--~~-~~--------~~p~~ia~d~~~~~lyv~d~~~~~ 102 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE--PTTII--RQ-DL--------GSPEGIALDHLGRTIFWTDSQLDR 102 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC--CEEEE--CT-TC--------CCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC--cEEEE--EC-CC--------CCccEEEEEecCCeEEEEECCCCE
Confidence 345688999976655554 455777774443221 11111 11 00 147889999975 56666667789
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC---CCeEEEEeCCCceeeeeec-cCCCceeEEEecCC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS---DGYVNIWDGFNKKRLCQFH-RYDTGITSLCFSYD 162 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~pd 162 (162)
|.++++..................+ ++|++..|+.+.. .+.|..+++... ....+. ..-.....++++|+
T Consensus 103 I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~ 177 (267)
T 1npe_A 103 IEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAF 177 (267)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETT
T ss_pred EEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCC
Confidence 9999986432221222122456778 9997666655543 368888887532 222221 22235677888764
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.15 E-value=2.2e-05 Score=56.86 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=50.4
Q ss_pred ceEEEEecCCCCEEEE-ecCCCeEEEEeCCCcc------------ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEE
Q psy1859 70 PVNAISFHQEYNTFAT-GGSDGYVNIWDGFNKK------------RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNI 135 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~-~~~d~~v~~wd~~~~~------------~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~i 135 (162)
...++.++|||+++++ +..+..|.++|+.+.+ ....+. -......+ |+|+|....+.-.|++|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEE
Confidence 4678999999976554 5578999999998653 122222 23456677 9999944445568899999
Q ss_pred EeCCC
Q psy1859 136 WDGFN 140 (162)
Q Consensus 136 wd~~~ 140 (162)
||+.+
T Consensus 357 wdi~~ 361 (595)
T 1fwx_A 357 WNIED 361 (595)
T ss_dssp EEHHH
T ss_pred EEhhH
Confidence 99876
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.08 E-value=0.00049 Score=44.45 Aligned_cols=121 Identities=7% Similarity=0.054 Sum_probs=74.8
Q ss_pred CCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 25 KQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 25 ~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
++.+.. .-.++.+.+ +|..+ .+.+.++.... ....+.+++..|+.+..++.|.++|..+.+.+
T Consensus 74 ~~~ly~ltw~~~~v~v--~D~~t--l~~~~ti~~~~------------~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFV--YDLAT--LTPRARFRYPG------------EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQV 137 (243)
T ss_dssp TTEEEEEESSSSEEEE--EETTT--TEEEEEEECSS------------CCCEEEECSSCEEEECSSSEEEEECTTTCCEE
T ss_pred CCEEEEEEeeCCEEEE--EECCc--CcEEEEEeCCC------------CceEEeeCCCEEEEECCCCeEEEEeCCCCeEE
Confidence 444444 445566666 66655 44444433221 11233356666666667899999999998877
Q ss_pred eeeeec--ccc---eeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-------------CCceeEEEecCC
Q psy1859 104 CQFHRY--DTG---ITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY-------------DTGITSLCFSYD 162 (162)
Q Consensus 104 ~~~~~~--~~~---v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------------~~~v~~v~~~pd 162 (162)
.++... ..+ +..+ +. +|+.++..-.+..|.+-|.++++.+..+... .+-.+.|+++|+
T Consensus 138 ~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 138 GSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred EEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 776532 222 2334 44 6666655557789999999999987776411 124578999874
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.05 E-value=0.00029 Score=46.09 Aligned_cols=124 Identities=6% Similarity=-0.063 Sum_probs=78.2
Q ss_pred eeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 22 FPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNK 100 (162)
Q Consensus 22 ~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~ 100 (162)
.++++.+... -.++.+.+ +|..+ .+.+.++.... ....+++++..|+.+..++.|.++|..+.
T Consensus 102 t~~g~~Ly~ltw~~~~v~V--~D~~T--l~~~~ti~~~~------------eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~ 165 (268)
T 3nok_A 102 ASDGERLYQLTWTEGLLFT--WSGMP--PQRERTTRYSG------------EGWGLCYWNGKLVRSDGGTMLTFHEPDGF 165 (268)
T ss_dssp EECSSCEEEEESSSCEEEE--EETTT--TEEEEEEECSS------------CCCCEEEETTEEEEECSSSEEEEECTTTC
T ss_pred EEeCCEEEEEEccCCEEEE--EECCc--CcEEEEEeCCC------------ceeEEecCCCEEEEECCCCEEEEEcCCCC
Confidence 3344444444 44566666 66655 44444443321 11223356777777777999999999998
Q ss_pred cceeeeeec--ccc---eeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-------------CCceeEEEecC
Q psy1859 101 KRLCQFHRY--DTG---ITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY-------------DTGITSLCFSY 161 (162)
Q Consensus 101 ~~~~~~~~~--~~~---v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------------~~~v~~v~~~p 161 (162)
+.+..+... ..+ +..+ |. +|+..+....+..|.+-|.++++.+..+... .+-.+.|+|+|
T Consensus 166 ~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 166 ALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred eEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 877776532 222 3445 55 7766665557889999999999987776421 13457899987
Q ss_pred C
Q psy1859 162 D 162 (162)
Q Consensus 162 d 162 (162)
+
T Consensus 245 ~ 245 (268)
T 3nok_A 245 G 245 (268)
T ss_dssp T
T ss_pred C
Confidence 5
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.94 E-value=0.00023 Score=52.85 Aligned_cols=88 Identities=11% Similarity=0.110 Sum_probs=50.7
Q ss_pred EEEEeeCCCeEEEEcCCCcE-----------------EEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC
Q psy1859 18 CIKCFPNKQGYVLSSIEGRA-----------------AVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~g~i-----------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
.+++.|++..++.++.++.. .|+-+|..+ .+.+..+.......-..........+....+|
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~T--G~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDT--GKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT--CCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCC--CCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 46788888888887765421 233477766 34444433211000000001122333344466
Q ss_pred ---CEEEEecCCCeEEEEeCCCccceeeee
Q psy1859 81 ---NTFATGGSDGYVNIWDGFNKKRLCQFH 107 (162)
Q Consensus 81 ---~~l~~~~~d~~v~~wd~~~~~~~~~~~ 107 (162)
..++.++.+|.++++|..+++.+..+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 678899999999999999998876543
No 245
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.93 E-value=0.0022 Score=45.06 Aligned_cols=130 Identities=12% Similarity=0.080 Sum_probs=72.7
Q ss_pred EEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecC-CC----
Q psy1859 17 RCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGS-DG---- 90 (162)
Q Consensus 17 ~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d~---- 90 (162)
..|+++| ++..|.++...+.|.. ++.......... . .. .....++|+++++.|..+.. ++
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~--id~~~~~v~~~~--~--~~--------~~P~~ia~d~~G~~lyvad~~~~~~~~ 205 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRL--IDFEKEYVSTVY--S--GL--------SKVRTICWTHEADSMIITNDQNNNDRP 205 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEE--EETTTTEEEEEE--C--CC--------SCEEEEEECTTSSEEEEEECCSCTTSE
T ss_pred CEEEECCCCCCeEEEEeCCCcEEE--EECCCCEEEEEe--c--CC--------CCcceEEEeCCCCEEEEEeCCCCcccc
Confidence 5788997 4555555544455554 665441122111 1 11 14789999999985444433 22
Q ss_pred eEEEEeCCCccce--eeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeecc-CCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRL--CQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHR-YDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~--~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~pd 162 (162)
.+...+ ..+... ..+.. ......+ ++| ++.++++-..++.|..++..++........ .......++|+|+
T Consensus 206 ~v~~~~-~~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pd 280 (430)
T 3tc9_A 206 NNYILT-RESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPS 280 (430)
T ss_dssp EEEEEE-GGGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTT
T ss_pred eEEEEe-CCCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCC
Confidence 333344 333322 22322 2345566 899 777777766788999999987654222221 2234678888875
No 246
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.89 E-value=0.0016 Score=42.46 Aligned_cols=118 Identities=6% Similarity=0.047 Sum_probs=71.2
Q ss_pred eeccccccEEEEEEeeCCCeEEE-EcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 8 RESSLKFQTRCIKCFPNKQGYVL-SSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~l~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
....+...+..++++|++..|.+ ...++.|.. +|... .......+.+.. ....|++.+++.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~--ld~~g-~v~~~i~l~g~~----------D~EGIa~~~~g~~~vs~ 87 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVE--MTTNG-DLIRTIPLDFVK----------DLETIEYIGDNQFVISD 87 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEE--EETTC-CEEEEEECSSCS----------SEEEEEECSTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEE--EeCCC-CEEEEEecCCCC----------ChHHeEEeCCCEEEEEE
Confidence 33455567889999998765555 455555544 66642 222222222222 36788888888777776
Q ss_pred cCCCeEEEEeCCCccce---eeee------ecccceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 87 GSDGYVNIWDGFNKKRL---CQFH------RYDTGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 87 ~~d~~v~~wd~~~~~~~---~~~~------~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
-.++.+.++++.....+ .... ..+.....+ |+|.++.|+++.+.....+|.+
T Consensus 88 E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 88 ERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 67788999987654321 2221 123345788 9998877777765544444444
No 247
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.79 E-value=0.0023 Score=48.14 Aligned_cols=116 Identities=12% Similarity=-0.026 Sum_probs=63.8
Q ss_pred EEEEEeeCCCeEEEEcCCC--c-EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec---CCC
Q psy1859 17 RCIKCFPNKQGYVLSSIEG--R-AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG---SDG 90 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~g--~-i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~---~d~ 90 (162)
..++|+||++.|+....+. . -.||.++..+........+..... .....+.|+|+++.|+..+ ...
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~--------~~~~~~~~SpDg~~l~~~~~~~~~~ 295 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNP--------LFSAFMYKAADTNTLCIGSQSPETA 295 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCT--------TCEEEEEECTTSSEEEEEEECSSCE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCC--------ceEEEEEECCCCCEEEEEecCCCCc
Confidence 3578999998888776542 1 355556654422221122111110 1356789999998777554 345
Q ss_pred eEEEEeCCCcc-ce--eee-eecccceeEE-EcCCCCEEEEecCC----CeEEEEeCCC
Q psy1859 91 YVNIWDGFNKK-RL--CQF-HRYDTGITSL-FHQEYNTFATGGSD----GYVNIWDGFN 140 (162)
Q Consensus 91 ~v~~wd~~~~~-~~--~~~-~~~~~~v~~~-~~~~~~~l~~~~~d----~~i~iwd~~~ 140 (162)
.|+++|+.++. .. ..+ .........+ |+..+.+++....+ ..|..+|+.+
T Consensus 296 ~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 296 EVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred eEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 78889988752 22 222 2223334444 54444444554443 3677778764
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.78 E-value=0.00052 Score=45.75 Aligned_cols=116 Identities=13% Similarity=0.124 Sum_probs=68.9
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCcccee
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~ 104 (162)
+..+.+++.++.+.. ++... +.......... .+.++...+++. +..++.++.+..+|.. ++...
T Consensus 107 ~~~l~v~t~~~~l~~--~d~~g---~~~~~~~~~~~---------~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 107 EDILYVTSMDGHLYA--INTDG---TEKWRFKTKKA---------IYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp TTEEEEECTTSEEEE--ECTTS---CEEEEEECSSC---------CCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEE
T ss_pred CCEEEEEecCCEEEE--EcCCC---CEEEEEcCCCc---------eeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeE
Confidence 455667777777776 55431 12222221111 345566666666 4556778999999998 76666
Q ss_pred eeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEEec
Q psy1859 105 QFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLCFS 160 (162)
Q Consensus 105 ~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 160 (162)
.+......+..+ ..+++.+++.. +.|..+| .+++.+..+......+.++...
T Consensus 171 ~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~ 223 (330)
T 3hxj_A 171 RFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAIS 223 (330)
T ss_dssp EEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEEC
T ss_pred EEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEEC
Confidence 655444555556 66777755444 7889999 6776665554433445444443
No 249
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.75 E-value=0.0007 Score=49.27 Aligned_cols=61 Identities=16% Similarity=0.078 Sum_probs=45.3
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
.++.|..||..+++.+.++... ..+... +...+..++.++.|+.|+.+|.++++.+.++..
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 3578999999999887776532 222222 333566788899999999999999999888763
No 250
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.68 E-value=0.0018 Score=48.22 Aligned_cols=83 Identities=6% Similarity=0.054 Sum_probs=48.0
Q ss_pred EEEEeeCCCeEEEEcCCCc-------------------EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC
Q psy1859 18 CIKCFPNKQGYVLSSIEGR-------------------AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ 78 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~g~-------------------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 78 (162)
.+++.|+...+++++.++. +.. +|..+ .+.+..+.......-......++.......
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A--lD~~T--G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~ 314 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA--VNADT--GEYVWHYQTTPGDAWDYTATQHMILAELPI 314 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE--EETTT--CCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE--EEccC--CceeEeeecCCcccccccCCCCcEEEeecc
Confidence 4678888888888877653 444 67666 444444332110000000111122222223
Q ss_pred CCC---EEEEecCCCeEEEEeCCCcccee
Q psy1859 79 EYN---TFATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 79 ~~~---~l~~~~~d~~v~~wd~~~~~~~~ 104 (162)
+|+ .++.++.+|.++++|.++++.+.
T Consensus 315 ~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 315 DGKPRKVLMQAPKNGFFYVIDRATGELLS 343 (689)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred CCcEEEEEEEECCCCeEEEEECCCCCEec
Confidence 454 78899999999999999998763
No 251
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.67 E-value=0.0012 Score=48.83 Aligned_cols=117 Identities=14% Similarity=0.105 Sum_probs=72.2
Q ss_pred EEEEee-CCCeEEEEcCCC---------cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 18 CIKCFP-NKQGYVLSSIEG---------RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 18 ~i~~~~-~~~~l~~~~~~g---------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
..++.+ +++.++.|+.+. .-.++.||..++.......+...+. ....++++.+++++++.|+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~--------~~~~~~~~~~~g~lyv~GG 261 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD--------MFCPGISMDGNGQIVVTGG 261 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC--------CSSCEEEECTTSCEEEECS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC--------CccccccCCCCCCEEEeCC
Confidence 456677 788888876532 2245557776644444333222111 1234567788899999998
Q ss_pred -CCCeEEEEeCCCccceee--eeecccceeEE-EcCCCCEEEEec-CC-----CeEEEEeCCCcee
Q psy1859 88 -SDGYVNIWDGFNKKRLCQ--FHRYDTGITSL-FHQEYNTFATGG-SD-----GYVNIWDGFNKKR 143 (162)
Q Consensus 88 -~d~~v~~wd~~~~~~~~~--~~~~~~~v~~~-~~~~~~~l~~~~-~d-----~~i~iwd~~~~~~ 143 (162)
.+..+.+||..+.+.... +.... .-..+ ..+++++++.|+ .+ ..+.+||..+++-
T Consensus 262 ~~~~~v~~yd~~t~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 262 NDAKKTSLYDSSSDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp SSTTCEEEEEGGGTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred CCCCceEEecCcCCceeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 456899999887644322 22111 12233 567899999998 34 5789999987653
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.66 E-value=0.00078 Score=49.16 Aligned_cols=61 Identities=21% Similarity=0.222 Sum_probs=45.5
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY 150 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 150 (162)
+|.|..||+.+++.+.+..... +...- ....+.+++.++.|+.++.+|.++|+.+.+++..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCC
Confidence 5889999999998877665332 22211 2335678888999999999999999998887643
No 253
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.65 E-value=0.0023 Score=43.69 Aligned_cols=117 Identities=7% Similarity=-0.038 Sum_probs=67.8
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceece-EEEEecCCCCEEEEecCCCeEEEEeCCCccce
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPV-NAISFHQEYNTFATGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~ 103 (162)
+..+++++.++.+.. +|..+ .+....................+ ..+.. .+..++.++.++.|..+|..+++.+
T Consensus 53 ~~~v~~~~~~g~v~a--~d~~t--G~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 53 DNVVYAADRAGLVKA--LNADD--GKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp TTEEEEECTTSEEEE--EETTT--CCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCeEEE--EEccC--CceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEE
Confidence 456777777887777 66655 33333322211000000000012 12222 3457777888999999999999877
Q ss_pred eeeeecccceeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 104 CQFHRYDTGITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 104 ~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
............... .+..+++++.++.|..+|.++++.+....
T Consensus 127 W~~~~~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~ 170 (376)
T 3q7m_A 127 WQTKVAGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVN 170 (376)
T ss_dssp EEEECSSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEeCCCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEe
Confidence 666533221111111 24578888889999999999998776654
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.60 E-value=0.0075 Score=41.68 Aligned_cols=120 Identities=9% Similarity=0.003 Sum_probs=68.0
Q ss_pred cEEEEEEeeCCCeEEEEcCC--CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCe
Q psy1859 15 QTRCIKCFPNKQGYVLSSIE--GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGY 91 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~--g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~ 91 (162)
....|++.|.+..++.+... +.|.. ++........+.. .. . .....|+++|++ .++++-+..+.
T Consensus 203 ~P~giavdp~~g~ly~td~~~~~~I~r--~~~dG~~~~~~~~-~~--~--------~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 203 KPRAIALHPMEGTIYWTDWGNTPRIEA--SSMDGSGRRIIAD-TH--L--------FWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEE--EETTSCSCEEEEC-SS--C--------SCEEEEEEEGGGTEEEEEETTTTE
T ss_pred CCcEEEEEcCCCeEEEeccCCCCEEEE--EeCCCCCcEEEEE-CC--C--------CCeeeEEEeCCCCEEEEEECCCCE
Confidence 34678888876665555433 34444 5443211222111 11 1 136789999865 55566667789
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
|..+|+........+.........+ + .++.++++-...+.|..+|..+++.+..+.
T Consensus 270 I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 270 IERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 9999986533322222223345566 6 344555666677889989866666555544
No 255
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.55 E-value=0.0043 Score=42.32 Aligned_cols=106 Identities=14% Similarity=0.061 Sum_probs=67.7
Q ss_pred CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCCCcccee
Q psy1859 25 KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 25 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~ 104 (162)
+..+++++.++.+.. +|..+ .+........ ....+.. .+..+..++.++.+..+|..+++...
T Consensus 239 ~~~v~~~~~~g~l~~--~d~~t--G~~~w~~~~~-----------~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 239 NGVVFALAYNGNLTA--LDLRS--GQIMWKRELG-----------SVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLW 301 (376)
T ss_dssp TTEEEEECTTSCEEE--EETTT--CCEEEEECCC-----------CEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCEEEEEecCcEEEE--EECCC--CcEEeeccCC-----------CCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 455677777888777 56544 3333332211 1233333 25667777789999999999998766
Q ss_pred eeeecc-cceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 105 QFHRYD-TGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 105 ~~~~~~-~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
...... ...... . .+..++.++.+|.|..+|.++++.+.....
T Consensus 302 ~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 302 TQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 554211 122222 2 356788888999999999999988776654
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.53 E-value=0.0077 Score=40.27 Aligned_cols=114 Identities=11% Similarity=-0.090 Sum_probs=66.8
Q ss_pred cEEEEEEee-CCCeEEEEcCCCcEEEEEecCCcccceeeee-eeeeeeccCcccceeceEEEEecC-CCCEEEEecC---
Q psy1859 15 QTRCIKCFP-NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYA-FKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATGGS--- 88 (162)
Q Consensus 15 ~~~~i~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~--- 88 (162)
....+++.+ +++ |+++...+.+.. ++...+..+.... ..+... .....+++.+ +|+++++-..
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~--~d~~~g~~~~~~~~~~~~~~--------~~p~~i~~d~~~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSV--VGSEGGHATQLATSVDGVPF--------KWLYAVTVDQRTGIVYFTDVSTLY 149 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEE--ECTTCEECEEEESEETTEEC--------SCEEEEEECTTTCCEEEEESCSSC
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEE--EeCCCCEEEEecccCCCCcc--------cccceEEEecCCCEEEEECCcccc
Confidence 456788887 555 444444444544 5654321111111 011111 1467899999 8987776532
Q ss_pred --------------CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEe-cCCCeEEEEeCCC
Q psy1859 89 --------------DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATG-GSDGYVNIWDGFN 140 (162)
Q Consensus 89 --------------d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~-~~d~~i~iwd~~~ 140 (162)
++.|..+|..+++..... ..-.....+ ++|++++|+.+ ...+.|..+++..
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cccccceehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 377888988765432222 222345567 99999866655 5668999999864
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.53 E-value=0.0044 Score=45.98 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=46.8
Q ss_pred CCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC
Q psy1859 89 DGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY 150 (162)
Q Consensus 89 d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 150 (162)
+|.|..||+.+++.+.+...... .... +...+.++++++.|+.++.||.++++.+..+...
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTH-WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceEEEEeCCCCcEEEEccCCCC-CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 48899999999988777654322 2222 4456788999999999999999999988877543
No 258
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.52 E-value=0.0091 Score=41.92 Aligned_cols=114 Identities=14% Similarity=0.004 Sum_probs=67.6
Q ss_pred cEEEEEEeeCCCeEEEEcC-CC--cEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecC-CCCEEEEecCCC
Q psy1859 15 QTRCIKCFPNKQGYVLSSI-EG--RAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQ-EYNTFATGGSDG 90 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~-~g--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~ 90 (162)
....|+++++++.++++.. ++ ...+..++... .......+.. .. ....++++| ++.++++-..++
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~~~~~~l~~--~~--------~p~giavdp~~g~lyv~d~~~~ 248 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GFKVITELTK--GQ--------NCNGAETHPINGELYFNSWNAG 248 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TSCSEEEEEE--CS--------SCCCEEECTTTCCEEEEETTTT
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ceeeeeeecc--CC--------CceEEEEeCCCCEEEEEECCCC
Confidence 3567899999986665543 22 22232233322 1111111111 11 367888999 678888877889
Q ss_pred eEEEEeCCCccceeeeee-cccceeEE-EcCCCCEEEEe-cCCCeEEEEeCC
Q psy1859 91 YVNIWDGFNKKRLCQFHR-YDTGITSL-FHQEYNTFATG-GSDGYVNIWDGF 139 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~-~~~~v~~~-~~~~~~~l~~~-~~d~~i~iwd~~ 139 (162)
.|..++...+........ .......+ |+|+|++|+.+ ...+.|..++..
T Consensus 249 ~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 249 QVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 999999886543222221 12346678 99999955444 567789887754
No 259
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.43 E-value=0.013 Score=40.46 Aligned_cols=133 Identities=7% Similarity=-0.075 Sum_probs=73.1
Q ss_pred EEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEE
Q psy1859 16 TRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVN 93 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~ 93 (162)
...++|.+....|+.+ ...+.|.. ++......+.+.. .... ....+++.+.+ .++++-...+.|.
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r--~~~~g~~~~~~~~-~~~~----------~p~glavd~~~g~lY~~d~~~~~I~ 184 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILR--ANLNGSNVEEVVS-TGLE----------SPGGLAVDWVHDKLYWTDSGTSRIE 184 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEE--EETTSCCEEEEEC-SSCS----------CCCCEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEE--EecCCCCcEEEEe-CCCC----------CccEEEEEeCCCeEEEEcCCCCeEE
Confidence 4578888765555544 44555555 4443211111111 1111 35678888754 5666667778899
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEec-CC-CeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG-SD-GYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+.++........+...-.....+ ++|.+.+|+.+. .. +.|...++............-.....|+|+|
T Consensus 185 ~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~ 255 (386)
T 3v65_B 185 VANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDY 255 (386)
T ss_dssp ECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEG
T ss_pred EEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeC
Confidence 98887543222232223456778 898766666554 33 6788888754322222222223467777775
No 260
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.42 E-value=0.012 Score=39.78 Aligned_cols=139 Identities=12% Similarity=0.107 Sum_probs=81.8
Q ss_pred EEEEEeeCCCeEEEEc-CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEe---cCCCCEEEEec-----
Q psy1859 17 RCIKCFPNKQGYVLSS-IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISF---HQEYNTFATGG----- 87 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~-~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~p~~~~l~~~~----- 87 (162)
.++.|.+....|..++ ..++|.. +++..+..... .+..-... +. ....+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~--~~~~~~~~~~~-~~~~~s~~--g~-~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEV--YNPKTQSHFNV-VIDGASSN--GD-GEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEE--ECTTTCCEEEE-CCTTTCCS--SC-CSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cCccCcCCCCEEEEEeccCCEEEE--EcCCCCeEEEE-ecCCcccc--CC-CcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 5788988655555554 7899888 55542112222 22210000 00 0113689999 68877777543
Q ss_pred --------CCCeEEEEeCC---Cccceeeee--ecc-----------cceeEE-EcCCCCEEEEecCC-CeEEEEeCCCc
Q psy1859 88 --------SDGYVNIWDGF---NKKRLCQFH--RYD-----------TGITSL-FHQEYNTFATGGSD-GYVNIWDGFNK 141 (162)
Q Consensus 88 --------~d~~v~~wd~~---~~~~~~~~~--~~~-----------~~v~~~-~~~~~~~l~~~~~d-~~i~iwd~~~~ 141 (162)
.+..|..+|+. +++.+.... ... .....+ ..++|+..++++.. +.|...+....
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 26789999999 776665443 111 236677 99999999988887 88777776533
Q ss_pred eeeeeec--c----CCCceeEEEecCC
Q psy1859 142 KRLCQFH--R----YDTGITSLCFSYD 162 (162)
Q Consensus 142 ~~~~~~~--~----~~~~v~~v~~~pd 162 (162)
.+..+. . .....+.|+++||
T Consensus 170 -~~~~~~~~~~~~~~~~G~nGIv~~pd 195 (334)
T 2p9w_A 170 -TVSTFAWESGNGGQRPGYSGITFDPH 195 (334)
T ss_dssp -CEEEEEECCCCSSSCCSCSEEEEETT
T ss_pred -EEeeeeecCCCcccccCcceEEEeCC
Confidence 222221 1 1123567888775
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.36 E-value=0.015 Score=39.56 Aligned_cols=120 Identities=10% Similarity=0.037 Sum_probs=66.9
Q ss_pred cEEEEEEeeCCCeEEEEcC-C-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCe
Q psy1859 15 QTRCIKCFPNKQGYVLSSI-E-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGY 91 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~-~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~ 91 (162)
....|++.|.+..++.+.. . +.|...+.+... .+.... .. . .....++++|++ .++++-...+.
T Consensus 160 ~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~~~~~-~~--~--------~~PnGla~d~~~~~lY~aD~~~~~ 226 (349)
T 3v64_C 160 KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--RRIIAD-TH--L--------FWPNGLTIDYAGRRMYWVDAKHHV 226 (349)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEESCC-SS--C--------SCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC--cEEEEE-CC--C--------CCcceEEEeCCCCEEEEEECCCCE
Confidence 3467889986655555433 3 445553333221 222111 11 1 136789999866 55556667789
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
|..+|+........+.........+ + .++.++++-...+.|...+..+++.+..+.
T Consensus 227 I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 227 IERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 9999987533222222223345566 6 345555555567888888866665544443
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.35 E-value=0.017 Score=40.07 Aligned_cols=138 Identities=9% Similarity=-0.041 Sum_probs=74.7
Q ss_pred cEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC-CCEEEEecCCCeE
Q psy1859 15 QTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE-YNTFATGGSDGYV 92 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~d~~v 92 (162)
....++|.+....|+.+ ...+.|..++.+......... .+..... .....+++.+. ++++++-...+.|
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~-~~~~~~~--------~~p~glavD~~~~~lY~~d~~~~~I 183 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD-TVISRDI--------QAPDGLAVDWIHSNIYWTDSVLGTV 183 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCE-EEECSSC--------SCEEEEEEETTTTEEEEEETTTTEE
T ss_pred cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcce-EEEeCCC--------CCcccEEEEecCCceEEEECCCCeE
Confidence 45678888865555544 444666554333211000001 1111011 14678888874 5666677778899
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC--CCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS--DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
.+.++........+.........+ ++|.+.+|+.... .+.|...++............-.....|+++|
T Consensus 184 ~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~ 255 (400)
T 3p5b_L 184 SVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDL 255 (400)
T ss_dssp EEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEET
T ss_pred EEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEe
Confidence 999987544333333333456778 9997666666542 36888888854332222222223566777765
No 263
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.35 E-value=0.00096 Score=44.44 Aligned_cols=77 Identities=10% Similarity=0.087 Sum_probs=51.3
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEEE
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLC 158 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~ 158 (162)
+..+..++.++.+..+|.. ++...........+..+ ..+++. ++.++.++.|..+|.. ++.+..+......+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 4566778888999999988 76665555444444555 666666 5567778999999998 776655544333444444
Q ss_pred e
Q psy1859 159 F 159 (162)
Q Consensus 159 ~ 159 (162)
+
T Consensus 184 ~ 184 (330)
T 3hxj_A 184 I 184 (330)
T ss_dssp E
T ss_pred E
Confidence 3
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.34 E-value=0.0071 Score=44.35 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=44.3
Q ss_pred CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 88 SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 88 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
..|.|..||+.+++.+.+.... .+...- ....+.+++.++.|+.++.+|.++|+.+.+++.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l 512 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI 512 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeC
Confidence 3478999999999877666422 111111 233577888899999999999999999888763
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.34 E-value=0.013 Score=38.24 Aligned_cols=143 Identities=10% Similarity=0.041 Sum_probs=77.3
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC--eE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG--YV 92 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~--~v 92 (162)
....|++.+++.++++.-.++.+.++..+.... ......... .. ..........+++|+|.+..|.++.... .|
T Consensus 71 D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~-i~~~~~~~~-~~--~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i 146 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISDERDYAIYVISLTPNSE-VKILKKIKI-PL--QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEV 146 (255)
T ss_dssp SEEEEEECSTTEEEEEETTTTEEEEEEECTTCC-EEEEEEEEC-CC--SSCCCSSCCEEEEEETTTTEEEEEEESSSEEE
T ss_pred ChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe-eeeeeeecc-cc--ccccccCCcceEEEeCCCCEEEEEECcCCceE
Confidence 446688888887666655667777755554331 011111110 00 0001122578999999986655555443 44
Q ss_pred EEEeCC-Cccceeeeee-------cccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeeeccCC---------Cc
Q psy1859 93 NIWDGF-NKKRLCQFHR-------YDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYD---------TG 153 (162)
Q Consensus 93 ~~wd~~-~~~~~~~~~~-------~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------~~ 153 (162)
+.|+-. ....+..+.. ....+..+ ++| .+.+++.+.....|.++|.. ++.+..+.... ..
T Consensus 147 ~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~q 225 (255)
T 3qqz_A 147 YKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQ 225 (255)
T ss_dssp EEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCS
T ss_pred EEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCC
Confidence 455411 1111221111 12346677 888 55667777788899999975 55555543221 14
Q ss_pred eeEEEecCC
Q psy1859 154 ITSLCFSYD 162 (162)
Q Consensus 154 v~~v~~~pd 162 (162)
.-.|+|.|+
T Consensus 226 pEGia~d~~ 234 (255)
T 3qqz_A 226 AEGVAMDAS 234 (255)
T ss_dssp EEEEEECTT
T ss_pred CCeeEECCC
Confidence 567888764
No 266
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.33 E-value=0.014 Score=40.97 Aligned_cols=130 Identities=8% Similarity=-0.003 Sum_probs=68.4
Q ss_pred EEEEEeeC--CCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC---Ce
Q psy1859 17 RCIKCFPN--KQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD---GY 91 (162)
Q Consensus 17 ~~i~~~~~--~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d---~~ 91 (162)
..|++.|+ ...|..+...+.|+. ++... ........ .. .....++++++++++++.... ..
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~--id~~~--g~v~~~~~--~~--------~~P~giavd~dG~lyVad~~~~~~~~ 207 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRH--VDFVN--QYVDIKTT--NI--------GQCADVNFTLNGDMVVVDDQSSDTNT 207 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEE--EETTT--TEEEEECC--CC--------SCEEEEEECTTCCEEEEECCSCTTSE
T ss_pred ceEEEccccCCCEEEEEeCCCCEEE--EECCC--CEEEEeec--CC--------CCccEEEECCCCCEEEEcCCCCcccc
Confidence 47888884 344555444366665 66543 22211111 11 147899999999966555422 12
Q ss_pred -EEEEeCCCccce--eeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCCCceeeeee-c-cCCCceeEEEecCC
Q psy1859 92 -VNIWDGFNKKRL--CQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQF-H-RYDTGITSLCFSYD 162 (162)
Q Consensus 92 -v~~wd~~~~~~~--~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~-~~~~~v~~v~~~pd 162 (162)
+...+.. +... ..+. .......+ ++| +|.++++-..++.|+.+|..++.....+ . ........++|+||
T Consensus 208 gv~~~~~~-~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpd 283 (433)
T 4hw6_A 208 GIYLFTRA-SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPT 283 (433)
T ss_dssp EEEEECGG-GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTT
T ss_pred eEEEEECC-CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCC
Confidence 3333322 2111 1121 22334456 888 6766666667789999999766542222 1 11122345888775
No 267
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.33 E-value=0.014 Score=41.77 Aligned_cols=113 Identities=13% Similarity=0.035 Sum_probs=62.1
Q ss_pred EEEEEEee-CCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEe-------cCCCCEEEEe
Q psy1859 16 TRCIKCFP-NKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISF-------HQEYNTFATG 86 (162)
Q Consensus 16 ~~~i~~~~-~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~p~~~~l~~~ 86 (162)
...|++.| +...|+++... +.| +.+|..+.....+.. ... ........++| ++++..|+.+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i--~~ID~~~~~v~~l~~--~~~------~~~~~p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAI--QLIDLKNRMLSSPLN--INT------IPTNRIRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEE--EEEETTTTEEEEEEC--CTT------SSCSBEEEEEECCCBTTTBCTTCEEEEE
T ss_pred CCEEEEccCCCCEEEEEECCCCeE--EEEECCCCEEEEEEc--cCc------cccCCCcEEEEeecccccCCCCCEEEEE
Confidence 46789998 34545554433 444 447765522222221 110 01114789999 9999855555
Q ss_pred cCCC-------eEEEEeCCC-ccce-----eeeeecccceeEE-EcC-CCCEEEEecCCCeEEEEeCC
Q psy1859 87 GSDG-------YVNIWDGFN-KKRL-----CQFHRYDTGITSL-FHQ-EYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 87 ~~d~-------~v~~wd~~~-~~~~-----~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~i~iwd~~ 139 (162)
...+ .+.+.+... +... ..+... .....+ ++| ++.++++-..++.|..+|+.
T Consensus 211 d~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 211 IDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp ECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred eCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 4332 366666443 2222 223222 233456 888 45556666688899999987
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.29 E-value=0.016 Score=38.65 Aligned_cols=77 Identities=5% Similarity=-0.119 Sum_probs=50.0
Q ss_pred ceEEEEecCCCCE-EEEecCCCeEEEEeCCCcc--ceeeeeecccceeEE-EcCCCCEEEEecC----------CCeEEE
Q psy1859 70 PVNAISFHQEYNT-FATGGSDGYVNIWDGFNKK--RLCQFHRYDTGITSL-FHQEYNTFATGGS----------DGYVNI 135 (162)
Q Consensus 70 ~v~~~~~~p~~~~-l~~~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~-~~~~~~~l~~~~~----------d~~i~i 135 (162)
....++++|+++. +++-..++.|..|++.... ....+....+ ...+ ++++|.+.++... .+.|..
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~ 264 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIK 264 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEE
Confidence 3568999999975 4555677899999987532 1122221223 6667 9999987666544 466888
Q ss_pred EeCCCceeeeeec
Q psy1859 136 WDGFNKKRLCQFH 148 (162)
Q Consensus 136 wd~~~~~~~~~~~ 148 (162)
+|. .++.+..+.
T Consensus 265 ~d~-~G~~~~~~~ 276 (322)
T 2fp8_A 265 FDE-FGNILEVIP 276 (322)
T ss_dssp ECT-TSCEEEEEE
T ss_pred ECC-CCCEEEEEE
Confidence 887 466655554
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.26 E-value=0.02 Score=38.95 Aligned_cols=132 Identities=6% Similarity=-0.082 Sum_probs=73.2
Q ss_pred EEEEEEeeCCCeEEEE-cCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEE
Q psy1859 16 TRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVN 93 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~ 93 (162)
...++|.+....|+.+ ...+.|.. ++......+.+.. .+.. ....+++.+.+ +++++-...+.|.
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r--~~~~g~~~~~~~~-~~~~----------~p~glavd~~~g~ly~~d~~~~~I~ 141 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILR--ANLNGSNVEEVVS-TGLE----------SPGGLAVDWVHDKLYWTDSGTSRIE 141 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEE--EETTSCSCEEEEC-SSCS----------CCCEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEEeccccEEEEEeccCCceEE--EecCCCCceEEEe-CCCC----------CccEEEEecCCCeEEEEcCCCCeEE
Confidence 4677888765555544 44555555 4433211222111 1111 35688888754 5666767788999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEec-CC-CeEEEEeCCCceeeeee-ccCCCceeEEEecC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG-SD-GYVNIWDGFNKKRLCQF-HRYDTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~-~~~~~~v~~v~~~p 161 (162)
+.++........+...-.....+ ++|.+..|+... .. +.|...++.... ...+ ...-.....++|+|
T Consensus 142 ~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~ 212 (349)
T 3v64_C 142 VANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDY 212 (349)
T ss_dssp EEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEET
T ss_pred EEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeC
Confidence 99987543222222223456778 998666555554 44 788888875432 2222 22223467788775
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.25 E-value=0.019 Score=38.44 Aligned_cols=136 Identities=9% Similarity=-0.051 Sum_probs=74.1
Q ss_pred cEEEEEEeeCCCeEEEE-cCCCcEEEEEecCCc--ccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCC
Q psy1859 15 QTRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGP--EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDG 90 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~ 90 (162)
....++|.+.+..++.+ ...+.|..++.+... ...... +.. .. .....+++.+.+ +++++-..++
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~--~~~-~~--------~~p~glavd~~~~~ly~~d~~~~ 99 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISR-DI--------QAPDGLAVDWIHSNIYWTDSVLG 99 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE--ECS-SC--------SCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE--EeC-CC--------CCcCEEEEeecCCeEEEEECCCC
Confidence 34678899865555544 445667664443210 001111 110 00 135788888654 5666667789
Q ss_pred eEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC--CeEEEEeCCCceeeeee-ccCCCceeEEEecCC
Q psy1859 91 YVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD--GYVNIWDGFNKKRLCQF-HRYDTGITSLCFSYD 162 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~-~~~~~~v~~v~~~pd 162 (162)
.|.+.++........+.........+ ++|.+..++.+... +.|...++. +.....+ ...-.....++|+|+
T Consensus 100 ~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~ 174 (316)
T 1ijq_A 100 TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLL 174 (316)
T ss_dssp EEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETT
T ss_pred EEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEecc
Confidence 99999987433222222233456778 99876666555432 688888875 3322222 122234667777753
No 271
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.18 E-value=0.046 Score=41.53 Aligned_cols=92 Identities=9% Similarity=-0.057 Sum_probs=56.7
Q ss_pred ceEEEEecCCC-CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC--CCeEEEEeCCCceeee
Q psy1859 70 PVNAISFHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS--DGYVNIWDGFNKKRLC 145 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~ 145 (162)
....|++.+.+ +++++-...+.|.+.++........+.........| ++|.+.+|+.+.. .+.|...++.......
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 36688888776 566677778999999987543322333333457788 9997666666542 3688888885433222
Q ss_pred eeccCCCceeEEEecC
Q psy1859 146 QFHRYDTGITSLCFSY 161 (162)
Q Consensus 146 ~~~~~~~~v~~v~~~p 161 (162)
.+...-.....|++.+
T Consensus 552 lv~~~l~~P~GLavD~ 567 (791)
T 3m0c_C 552 LVTENIQWPNGITLDL 567 (791)
T ss_dssp EECSSCSCEEEEEEET
T ss_pred EEeCCCCCceEEEEec
Confidence 2222223566666654
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.14 E-value=0.026 Score=37.97 Aligned_cols=133 Identities=5% Similarity=-0.105 Sum_probs=72.5
Q ss_pred EEEEEEeeCCCeEE-EEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC-CCEEEEecCCCeEE
Q psy1859 16 TRCIKCFPNKQGYV-LSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE-YNTFATGGSDGYVN 93 (162)
Q Consensus 16 ~~~i~~~~~~~~l~-~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~d~~v~ 93 (162)
...+.|.+....|+ +-...+.|..++.+... ...... . ... ....++++.+. +.++++-...+.|.
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~--~~~~~~-~-~~l--------~~p~glavd~~~g~ly~~d~~~~~I~ 104 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--SVQNVV-V-SGL--------LSPDGLACDWLGEKLYWTDSETNRIE 104 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSS--CCCEEE-E-ECC--------SCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCC--ceEEEE-c-CCC--------CCccEEEEEcCCCeEEEEECCCCEEE
Confidence 34677888544444 43445666654333221 111111 1 110 13667888874 46666767788999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEec--CCCeEEEEeCCCceeeeee-ccCCCceeEEEecC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG--SDGYVNIWDGFNKKRLCQF-HRYDTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~-~~~~~~v~~v~~~p 161 (162)
++++........+.........+ ++|.+.+|+.+. ..+.|...++... ....+ ...-.....++|+|
T Consensus 105 ~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pnglavd~ 175 (318)
T 3sov_A 105 VSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPNGLTLDY 175 (318)
T ss_dssp EEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEET
T ss_pred EEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCccEEEEec
Confidence 99987533222222233456677 888766666655 3578888887532 22222 22223456777776
No 273
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.11 E-value=0.03 Score=39.29 Aligned_cols=116 Identities=14% Similarity=0.130 Sum_probs=67.3
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCc-ccc-------eeeeeeeeeeeccCcccceeceEEEEecCCC---CEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGP-EMQ-------KMKYAFKCHRIKEDGIEKIYPVNAISFHQEY---NTF 83 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~l 83 (162)
.+..+..+|+|++|+..+. ..|.|..+.... ... .....+.... .......+|..+.|||-+ ..|
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~---~~~~~~s~I~qVlWHPl~~~ds~L 142 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE---EEVGPKSSIKKVLFHPKSYRDSCI 142 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG---CC--CCCCEEEEEECTTBGGGCEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCC---cccCCCCceeEEEeccccCCCCeE
Confidence 5677999999999988654 566763333111 000 0011111110 001123479999999975 589
Q ss_pred EEecCCCeEEEEeCCCc--cceeeee---------ecccceeEE-EcCCCCEEEEe--cCCCeEEE
Q psy1859 84 ATGGSDGYVNIWDGFNK--KRLCQFH---------RYDTGITSL-FHQEYNTFATG--GSDGYVNI 135 (162)
Q Consensus 84 ~~~~~d~~v~~wd~~~~--~~~~~~~---------~~~~~v~~~-~~~~~~~l~~~--~~d~~i~i 135 (162)
++-..|+.|++||+... ++. .+. .....+.++ |.+++-.|... ...|.|+-
T Consensus 143 VVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 143 VVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 99999999999999863 222 221 112456677 87766545443 35565543
No 274
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.06 E-value=0.032 Score=37.79 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=52.9
Q ss_pred ceEEEEecCCCCEEEEecCC-CeEEEEeCCCccceeeeee------cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 70 PVNAISFHQEYNTFATGGSD-GYVNIWDGFNKKRLCQFHR------YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d-~~v~~wd~~~~~~~~~~~~------~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
....++..++|+..++++.. +.|...+.... .+..+.. .....+.+ ++|+|..|++....+.|..+|+++.
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 47899999999999999888 88887776533 3332211 12235678 9999999888877999999998743
No 275
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.03 E-value=0.044 Score=38.52 Aligned_cols=90 Identities=13% Similarity=0.120 Sum_probs=60.5
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCcc----------c--eeeeee------cccceeEE-EcC---CCCEEEEe
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKK----------R--LCQFHR------YDTGITSL-FHQ---EYNTFATG 127 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~----------~--~~~~~~------~~~~v~~~-~~~---~~~~l~~~ 127 (162)
.+..+..+|+|.+||..+ +..|.+-.+..+. . .+.+.- ...+|..+ ||| .+.-|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 377899999999998875 4578887776321 1 112221 13568888 999 45689999
Q ss_pred cCCCeEEEEeCCCce--eeeeec---------cCCCceeEEEecC
Q psy1859 128 GSDGYVNIWDGFNKK--RLCQFH---------RYDTGITSLCFSY 161 (162)
Q Consensus 128 ~~d~~i~iwd~~~~~--~~~~~~---------~~~~~v~~v~~~p 161 (162)
..|+.|++||+.... +. .+. .....|.+++|.+
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~ 189 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSK 189 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECT
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcC
Confidence 999999999997521 12 221 1225688888875
No 276
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.02 E-value=0.021 Score=42.39 Aligned_cols=85 Identities=8% Similarity=0.147 Sum_probs=47.4
Q ss_pred EEEEeeCCCeEEEEcCCCc-----------------EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC
Q psy1859 18 CIKCFPNKQGYVLSSIEGR-----------------AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~g~-----------------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
.+++.|+...++.++.++. ..|+-+|..+ .+.+..+.......-......+.....+..++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~t--G~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDT--GKLAWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT--CCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCC--CceeeEeecCCCccccccCCCCcEEEEeccCC
Confidence 3677887788888776653 0233477766 44444433211000000000122222333355
Q ss_pred C---EEEEecCCCeEEEEeCCCcccee
Q psy1859 81 N---TFATGGSDGYVNIWDGFNKKRLC 104 (162)
Q Consensus 81 ~---~l~~~~~d~~v~~wd~~~~~~~~ 104 (162)
+ .++.++.+|.++++|..+|+.+.
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLIS 338 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEec
Confidence 4 68889999999999999998763
No 277
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.01 E-value=0.034 Score=36.93 Aligned_cols=113 Identities=11% Similarity=0.027 Sum_probs=65.7
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC--Ce
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD--GY 91 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d--~~ 91 (162)
.....++|.++++.+++-..++.|.. ++.... ...... .. ..+..+++.++++++++.... ..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~--~d~~g~-~~~~~~--~~----------~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVS--ITPDGN-QQIHAT--VE----------GKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEE--ECTTCC-EEEEEE--CS----------SEEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEE--ECCCCc-eEEEEe--CC----------CCceeEEEcCCCcEEEEeccCCcce
Confidence 34567899999886666667777766 555431 111111 11 147889999999877665432 35
Q ss_pred EEEEeCCCccceeeeeec-ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCc
Q psy1859 92 VNIWDGFNKKRLCQFHRY-DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNK 141 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~-~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 141 (162)
|..+|..+++........ ......+ ..+++..+++-..++.|..+|..++
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 777777766543222111 1122333 4445544555546788988888654
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.96 E-value=0.033 Score=39.16 Aligned_cols=70 Identities=7% Similarity=-0.077 Sum_probs=47.9
Q ss_pred ceEEEEecC-CCCEEEEecCCCeEEEEeCCCccceeeeeec--ccceeEE-EcCCCCEEEEe-cCCCeEEEEeCC
Q psy1859 70 PVNAISFHQ-EYNTFATGGSDGYVNIWDGFNKKRLCQFHRY--DTGITSL-FHQEYNTFATG-GSDGYVNIWDGF 139 (162)
Q Consensus 70 ~v~~~~~~p-~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~--~~~v~~~-~~~~~~~l~~~-~~d~~i~iwd~~ 139 (162)
....++++| ++.++++-..++.|+.+|..++.....+... ......+ |+|++++|+.+ ...+.|+.++..
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 356788999 6777777778899999998866542222211 1223357 99999955554 466789997764
No 279
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.94 E-value=0.016 Score=37.03 Aligned_cols=108 Identities=9% Similarity=-0.015 Sum_probs=61.8
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
..+.++++|++...++ .+|. ||..+..+.....-+....+-.. .--....++.|.|+|.+.++ .||.|+-
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~--Ly~~~~~t~~~~~W~~s~t~IG~----~Gw~~F~a~~fD~~G~LYav--~dG~iyr 111 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDK--IYKGTPPTHDNDNWMGRAKKIGN----GGWNQFQFLFFDPNGYLYAV--SKDKLYK 111 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTE--EEEESCCCSTTCCHHHHCEEEEC----SCGGGCSEEEECTTSCEEEE--ETTEEEE
T ss_pred cceeEEECCCccEEEE--eCCe--EEEECCCCCCcccccccccEecc----cccccceEEEECCCCCEEEe--CCCEEEE
Confidence 4568999999887666 5564 55576643111111110000000 00002478999999988888 5699988
Q ss_pred EeCCCccc---ee---ee-eecccceeEE-EcCCCCEEEEecCCCeEE
Q psy1859 95 WDGFNKKR---LC---QF-HRYDTGITSL-FHQEYNTFATGGSDGYVN 134 (162)
Q Consensus 95 wd~~~~~~---~~---~~-~~~~~~v~~~-~~~~~~~l~~~~~d~~i~ 134 (162)
++..+... +. .+ ...-..+..+ +.|+|.+.++. |+.+.
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 87643211 11 11 1122467788 99999877777 66653
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.92 E-value=0.006 Score=45.54 Aligned_cols=78 Identities=10% Similarity=-0.042 Sum_probs=48.2
Q ss_pred ceEEEEecCCC-CEEEEecCCCeEEEEeCCCccceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeee
Q psy1859 70 PVNAISFHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLC 145 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 145 (162)
....|+|+|++ .++++-...+.|..+++........+.. .......+ +..+ .++++....+.|..+|..+++.+.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence 35689999875 6666767788999999864322222211 11222333 4332 344455566899999988888766
Q ss_pred eec
Q psy1859 146 QFH 148 (162)
Q Consensus 146 ~~~ 148 (162)
++.
T Consensus 620 ~i~ 622 (699)
T 1n7d_A 620 LLA 622 (699)
T ss_dssp CCC
T ss_pred Eee
Confidence 664
No 281
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.91 E-value=0.045 Score=37.32 Aligned_cols=103 Identities=10% Similarity=0.050 Sum_probs=56.0
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC---C-CEEEEecCC-
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE---Y-NTFATGGSD- 89 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~-~~l~~~~~d- 89 (162)
....+++.|+|+.+++ ...|.|.+++ + .+ ...+..+.... .-......|+++|+ + .++++-...
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~-~-g~--~~~~~~~~v~~------~g~~~p~gia~~pdf~~~g~lYv~~~~~~ 100 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR-E-GR--LSTYAELSVYH------RGESGLLGLALHPRFPQEPYVYAYRTVAE 100 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE-T-TE--EEEEEECCCCC------STTCSEEEEEECTTTTTSCEEEEEEEECT
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE-C-CC--ccEeecceEee------cCCCCceeEEECCCCCCCCEEEEEEecCC
Confidence 3468999999985555 5568888744 2 11 22222111000 01125789999998 4 444444432
Q ss_pred ----CeEEEEeCCCcc-----ce-eeeee---cccceeEE-EcCCCCEEEEec
Q psy1859 90 ----GYVNIWDGFNKK-----RL-CQFHR---YDTGITSL-FHQEYNTFATGG 128 (162)
Q Consensus 90 ----~~v~~wd~~~~~-----~~-~~~~~---~~~~v~~~-~~~~~~~l~~~~ 128 (162)
+.|..++...+. .+ ..+.. .......+ |.|||.+.++.+
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 101 GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 678888876431 11 11221 11123567 999997666643
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.83 E-value=0.053 Score=36.46 Aligned_cols=119 Identities=12% Similarity=0.021 Sum_probs=65.5
Q ss_pred cEEEEEEeeCCCeEEEEcC--CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCe
Q psy1859 15 QTRCIKCFPNKQGYVLSSI--EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGY 91 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~--~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~ 91 (162)
....|++.|.+..++.+.. .+.|.. ++......+.... .. . .....++++|++ .++.+-+..+.
T Consensus 123 ~P~giavdp~~g~ly~td~~~~~~I~r--~~~dG~~~~~~~~-~~--l--------~~Pnglavd~~~~~lY~aD~~~~~ 189 (318)
T 3sov_A 123 QPRAIALDPSSGFMYWTDWGEVPKIER--AGMDGSSRFIIIN-SE--I--------YWPNGLTLDYEEQKLYWADAKLNF 189 (318)
T ss_dssp SEEEEEEEGGGTEEEEEECSSSCEEEE--EETTSCSCEEEEC-SS--C--------SCEEEEEEETTTTEEEEEETTTTE
T ss_pred CccEEEEeCCCCEEEEEecCCCCEEEE--EEcCCCCeEEEEE-CC--C--------CCccEEEEeccCCEEEEEECCCCE
Confidence 3467888886555555543 344444 4433211221111 11 1 136789999966 55556667889
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
|..+|+..................+ +. .+.++++-...+.|..++..+++....+
T Consensus 190 I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 190 IHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 9999986432222222223344455 53 3344555556788999998777654444
No 283
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.79 E-value=0.063 Score=36.77 Aligned_cols=115 Identities=9% Similarity=0.050 Sum_probs=69.8
Q ss_pred ccEEEEEEee--CCC-eEEEE-cC--CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec
Q psy1859 14 FQTRCIKCFP--NKQ-GYVLS-SI--EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG 87 (162)
Q Consensus 14 ~~~~~i~~~~--~~~-~l~~~-~~--~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 87 (162)
.+..-|.+.+ ++. +|+++ .. +..+.+|.++...........+.+.... ....+++.++|.++++..
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~--------~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLP--------SVNDIVAVGPEHFYATND 183 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCS--------SEEEEEEEETTEEEEEES
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCC--------CCceEEEeCCCCEEecCC
Confidence 3455566655 343 34443 22 4678888888765333333333333222 578999999998777653
Q ss_pred -----------------CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEec-CCCeEEEEeCC
Q psy1859 88 -----------------SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGG-SDGYVNIWDGF 139 (162)
Q Consensus 88 -----------------~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~i~iwd~~ 139 (162)
..|.|..+|. ++ +..+...-.....+ |+||++.++.+. ..+.|..|++.
T Consensus 184 ~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 184 HYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp CSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 1255655654 32 33332333456678 999998777765 56889999985
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.74 E-value=0.0066 Score=45.33 Aligned_cols=134 Identities=8% Similarity=-0.051 Sum_probs=68.0
Q ss_pred EEEEEEeeCCCeEEEE-cCCCcEEEEEecCCc--ccceeeeeeeeeeeccCcccceeceEEEEecCC-CCEEEEecCCCe
Q psy1859 16 TRCIKCFPNKQGYVLS-SIEGRAAVEYLDTGP--EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE-YNTFATGGSDGY 91 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~d~~ 91 (162)
...|+|.+.+..|+.+ ...+.|..++.+... ........ ... .....|++.+. ++++++-...+.
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~-~~~----------~~P~glavD~~~g~LY~tD~~~~~ 476 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDI----------QAPDGLAVDWIHSNIYWTDSVLGT 476 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC-SCC------------CCCEECCCSSSBCEECCTTTSC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe-CCC----------CCcceEEEEeeCCcEEEEeccCCe
Confidence 3467788766555554 344666664443210 00111110 000 12557888854 466666667789
Q ss_pred EEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-C-CeEEEEeCCCceeeeee-ccCCCceeEEEecC
Q psy1859 92 VNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-D-GYVNIWDGFNKKRLCQF-HRYDTGITSLCFSY 161 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d-~~i~iwd~~~~~~~~~~-~~~~~~v~~v~~~p 161 (162)
|.+.++........+.........+ ++|.+.+|+.+.. . +.|...++.... ...+ ...-.....|+|+|
T Consensus 477 I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~ 549 (699)
T 1n7d_A 477 VSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDL 549 (699)
T ss_dssp EEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECT
T ss_pred EEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEec
Confidence 9999987543322222222345667 8886665555543 2 677777764322 2222 11122345666665
No 285
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.69 E-value=0.074 Score=36.27 Aligned_cols=107 Identities=10% Similarity=0.061 Sum_probs=53.5
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC----CCEEEEecC--
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE----YNTFATGGS-- 88 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~l~~~~~-- 88 (162)
+...|++.|+++.++++...|.|.+ ++......+.+..+..... ........|+++|+ +.++++-+.
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~--~~~~g~~~~~~~~~~~v~~-----~g~~g~~gia~~pdf~~~g~lYv~~~~~~ 91 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRH--WQAGKGLSAPLSGVPDVWA-----HGQGGLLDVVLAPDFAQSRRIWLSYSEVG 91 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEE--EETTTEECCCCBSCCCCCC-----STTCSEEEEEECTTHHHHCEEEEEEEEEC
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEE--EeCCCceeeEecCCccccc-----CCCCCceeEEECCCCCCCCEEEEEEeCCC
Confidence 4578999999983444556788777 4432211111111110000 01124689999995 455554332
Q ss_pred -----CCeEEEEeCCCc--c--ceee-eee------cccceeEE-EcCCCCEEEEec
Q psy1859 89 -----DGYVNIWDGFNK--K--RLCQ-FHR------YDTGITSL-FHQEYNTFATGG 128 (162)
Q Consensus 89 -----d~~v~~wd~~~~--~--~~~~-~~~------~~~~v~~~-~~~~~~~l~~~~ 128 (162)
...|..+++... + ..+. +.. .......+ |.|||.+.++.+
T Consensus 92 ~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 92 DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp SSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred CCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 235666665432 1 1111 111 11123467 999997666643
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.60 E-value=0.076 Score=35.20 Aligned_cols=72 Identities=13% Similarity=0.010 Sum_probs=50.5
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCC--CeEEEEeCCCcee
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD--GYVNIWDGFNKKR 143 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d--~~i~iwd~~~~~~ 143 (162)
....++|+++++++++-..++.|..||.... ....+. .......+ ++++|+++++.... ..|..+|..+++.
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 4778999999998888778899999998653 332222 23457778 99999966655432 2476777777654
No 287
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.52 E-value=0.091 Score=35.14 Aligned_cols=92 Identities=13% Similarity=-0.026 Sum_probs=53.4
Q ss_pred ceEEEEecCCC-CEEEEecCCCeEEEEeCCC---ccceee-eeecccceeEE-EcCCCCEE-EEecCCCeEEEEeCCCce
Q psy1859 70 PVNAISFHQEY-NTFATGGSDGYVNIWDGFN---KKRLCQ-FHRYDTGITSL-FHQEYNTF-ATGGSDGYVNIWDGFNKK 142 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~---~~~~~~-~~~~~~~v~~~-~~~~~~~l-~~~~~d~~i~iwd~~~~~ 142 (162)
.+.+++|++.+ .++.+-..++.|..+++.. +..... +...-.....+ +++.+..| ++-...+.|.+.++....
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc
Confidence 47899999865 5666666789999999875 122222 22222345677 87655544 454567899999986443
Q ss_pred eeeeeccCCCceeEEEecC
Q psy1859 143 RLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 143 ~~~~~~~~~~~v~~v~~~p 161 (162)
....+...-.....+++.|
T Consensus 111 ~~~~~~~~~~~P~~iavdp 129 (316)
T 1ijq_A 111 RKTLFRENGSKPRAIVVDP 129 (316)
T ss_dssp EEEEEECTTCCEEEEEEET
T ss_pred eEEEEECCCCCcceEEeCC
Confidence 2222222223556677665
No 288
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.39 E-value=0.21 Score=37.82 Aligned_cols=117 Identities=10% Similarity=-0.031 Sum_probs=68.5
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+.++...++++.|.+|+.++-+.+ ++..++....... .... .....|.++...+++.+.+... + -+.
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~--~d~~~~~~~~~~~-~~~~------l~~~~v~~i~~d~~g~lwigt~-~-Gl~ 474 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSI--LHRNSGQVENFNQ-RNSQ------LVNENVYAILPDGEGNLWLGTL-S-ALV 474 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEE--EETTTCCEEEECT-TTSC------CSCSCEEEEEECSSSCEEEEES-S-CEE
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeE--EeCCCCcEEEeec-CCCC------cCCCeeEEEEECCCCCEEEEec-C-cee
Confidence 45778888777874566666666666 5544311111110 0000 0122588999888887666554 4 588
Q ss_pred EEeCCCccceeeee------ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee
Q psy1859 94 IWDGFNKKRLCQFH------RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR 143 (162)
Q Consensus 94 ~wd~~~~~~~~~~~------~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~ 143 (162)
+||..+++...... .....+.++ ..++|.+.+... +-|..||..+++.
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 475 RFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp EEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred EEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence 89987654322111 123567788 888887666554 4588888876654
No 289
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.39 E-value=0.21 Score=37.80 Aligned_cols=139 Identities=11% Similarity=0.024 Sum_probs=77.3
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+.++...++++. -.|+.++-+.. ++..+............... . -....|.++...+++++|..|+.++-|.
T Consensus 357 ~~V~~i~~d~~g~l-WiGt~~~Gl~~--~~~~~~~~~~~~~~~~~~~~--~-l~~~~v~~i~~d~~g~~lWigt~~~Gl~ 430 (795)
T 4a2l_A 357 NVVSCIVEDKDKNL-WIGTNDGGLNL--YNPITQRFTSYTLQEDESAR--G-IGSNNIKAVYVDEKKSLVYIGTHAGGLS 430 (795)
T ss_dssp SSEEEEEECTTSCE-EEEESSSCEEE--ECTTTCCEEEECCC--------C-CSCSCEEEEEEETTTTEEEEEETTTEEE
T ss_pred CeeEEEEECCCCCE-EEEECCCCeEE--EcCCCCcEEEEecCCCCccc--C-CCCccEEEEEEcCCCCEEEEEeCcCcee
Confidence 34777877777764 45666666666 55443111111100000000 0 0112588999888888566677777799
Q ss_pred EEeCCCccceeeee-----ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc------CCCceeEEEecC
Q psy1859 94 IWDGFNKKRLCQFH-----RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR------YDTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~~~~~~~~~~~-----~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------~~~~v~~v~~~p 161 (162)
.+|..+++.. .+. .....+.++ ..++|.+.+... +-|..||..+++....... ....|.++...+
T Consensus 431 ~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 431 ILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS 507 (795)
T ss_dssp EEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT
T ss_pred EEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECC
Confidence 9998876432 221 123467788 778887655554 4588899877654322111 124566665543
No 290
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.38 E-value=0.15 Score=36.13 Aligned_cols=109 Identities=11% Similarity=0.109 Sum_probs=55.7
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC----CCEEEEecC--
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE----YNTFATGGS-- 88 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~l~~~~~-- 88 (162)
+...|++.|+|+.+++-...+.|.+ ++...+....+..+...-. ...-......|+|+|+ +.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~--~~~~~g~~~~~~~~~~~~~---~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILR--VNPESGSVKTVFQVPEIVN---DADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEE--ECTTTCCEEEEEECTTCCC---CTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEE--EECCCCcEeEEecCCcccc---ccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 4568999999987776544455666 5543221222222111000 0001225789999995 444444432
Q ss_pred ----------CCeEEEEeCCCc-------ccee-eeee-cccceeEE-EcCCCCEEEEec
Q psy1859 89 ----------DGYVNIWDGFNK-------KRLC-QFHR-YDTGITSL-FHQEYNTFATGG 128 (162)
Q Consensus 89 ----------d~~v~~wd~~~~-------~~~~-~~~~-~~~~v~~~-~~~~~~~l~~~~ 128 (162)
...|.-++.... +.+. .+.. .......+ |.|||.+.++.+
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235555654321 1111 1211 12335677 999999777654
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.34 E-value=0.17 Score=36.32 Aligned_cols=114 Identities=12% Similarity=-0.004 Sum_probs=66.5
Q ss_pred cEEEEEE-------eeCCCeEEEEcCCC-----cEEEEEecCCc-cccee---eeeeeeeeeccCcccceeceEEEEecC
Q psy1859 15 QTRCIKC-------FPNKQGYVLSSIEG-----RAAVEYLDTGP-EMQKM---KYAFKCHRIKEDGIEKIYPVNAISFHQ 78 (162)
Q Consensus 15 ~~~~i~~-------~~~~~~l~~~~~~g-----~i~i~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p 78 (162)
....|+| +++++.++++...+ ...++.++... +.... ...+.... ....++.+|
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~----------~p~giavdp 256 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK----------QCNGATIHP 256 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES----------CCCCEEECT
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC----------CceEEEEcC
Confidence 3577999 99998666665543 23344454221 01110 01111111 356788899
Q ss_pred C-CCEEEEecCCCeEEEEeCC-------Cccc-----------eeee-ee-cccceeEE-EcCCCCEEEEe-cCCCeEEE
Q psy1859 79 E-YNTFATGGSDGYVNIWDGF-------NKKR-----------LCQF-HR-YDTGITSL-FHQEYNTFATG-GSDGYVNI 135 (162)
Q Consensus 79 ~-~~~l~~~~~d~~v~~wd~~-------~~~~-----------~~~~-~~-~~~~v~~~-~~~~~~~l~~~-~~d~~i~i 135 (162)
+ +.++++-..++.|..+|+. ++.. ...+ .. .......+ |+|+|++|+.+ .....|+.
T Consensus 257 ~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 257 INGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp TTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 5 5777777788999999987 4432 1121 11 12345678 99999965554 46678888
Q ss_pred EeC
Q psy1859 136 WDG 138 (162)
Q Consensus 136 wd~ 138 (162)
++.
T Consensus 337 id~ 339 (496)
T 3kya_A 337 SDY 339 (496)
T ss_dssp EEE
T ss_pred Eec
Confidence 554
No 292
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.28 E-value=0.034 Score=41.18 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=44.9
Q ss_pred EEEEeeCCCeEEEEcCC-CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-CC-----C
Q psy1859 18 CIKCFPNKQGYVLSSIE-GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-SD-----G 90 (162)
Q Consensus 18 ~i~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d-----~ 90 (162)
++++..+++.++.|+.+ ..+.+ ||..+........+...+ .-.+++..+++++++.|+ .+ .
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~--yd~~t~~W~~~~~~~~~R----------~~~s~~~~~dg~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSL--YDSSSDSWIPGPDMQVAR----------GYQSSATMSDGRVFTIGGSWSGGVFEK 314 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEE--EEGGGTEEEECCCCSSCC----------SSCEEEECTTSCEEEECCCCCSSSCCC
T ss_pred cccCCCCCCEEEeCCCCCCceEE--ecCcCCceeECCCCCccc----------cccceEEecCCeEEEEeCcccCCcccc
Confidence 45667889999998754 45655 565443243332222211 123455567889999988 34 5
Q ss_pred eEEEEeCCCccc
Q psy1859 91 YVNIWDGFNKKR 102 (162)
Q Consensus 91 ~v~~wd~~~~~~ 102 (162)
.+.+||..+.+.
T Consensus 315 ~~e~yd~~t~~W 326 (656)
T 1k3i_A 315 NGEVYSPSSKTW 326 (656)
T ss_dssp CEEEEETTTTEE
T ss_pred cceEeCCCCCcc
Confidence 689999987543
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.24 E-value=0.27 Score=37.51 Aligned_cols=119 Identities=8% Similarity=-0.136 Sum_probs=63.8
Q ss_pred cEEEEEEeeCCCeEEEEcCC--CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCe
Q psy1859 15 QTRCIKCFPNKQGYVLSSIE--GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGY 91 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~--g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~ 91 (162)
....|++.|.+.+|+.+... +.|.. .+........+.. ... .....|++++.+ +++++-.....
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~--~~~dG~~~~~lv~---~~l--------~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKK--GGLNGVDIYSLVT---ENI--------QWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEE--EETTSCCEEEEEC---SSC--------SCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEE--EecCCCceEEEEe---CCC--------CCceEEEEecCCCeEEEEeCCCCc
Confidence 35678888875555555432 44555 4433211222211 111 147789999766 45555556788
Q ss_pred EEEEeCCCccceeeeeec--ccceeEEEcCCCCEEEEe-cCCCeEEEEeCCCceeeeee
Q psy1859 92 VNIWDGFNKKRLCQFHRY--DTGITSLFHQEYNTFATG-GSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 92 v~~wd~~~~~~~~~~~~~--~~~v~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~ 147 (162)
|...++........+... -.....+ ...+.+|+.+ ...+.|...|..+++.+.++
T Consensus 582 I~~~d~dG~~~~~v~~~~~~l~~P~gl-av~~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 582 ISSIDVNGGNRKTILEDEKRLAHPFSL-AVFEDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEE-EEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCceEEEecCCCccCCCCEE-EEeCCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 999998654333333221 1223344 2223344444 46678888887777654444
No 294
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.20 E-value=0.17 Score=35.08 Aligned_cols=128 Identities=10% Similarity=-0.084 Sum_probs=68.3
Q ss_pred EEEEEEeeCCCeEEEEcC--CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCE-EEEecCCCeE
Q psy1859 16 TRCIKCFPNKQGYVLSSI--EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNT-FATGGSDGYV 92 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~--~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~~~~~d~~v 92 (162)
...|++.|.+.+|+.+.. .+.|...+.+... ...... ... .....|++++++.. +++-...+.|
T Consensus 204 P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~--~~~~~~-~~l----------~~P~glavd~~~~~lY~aD~~~~~I 270 (400)
T 3p5b_L 204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSLVT-ENI----------QWPNGITLDLLSGRLYWVDSKLHSI 270 (400)
T ss_dssp EEEEEEETTTTEEEEEECSSSCCEEEEETTSCS--CEEEEC-SSC----------SCEEEEEEETTTTEEEEEETTTTEE
T ss_pred cceEEEecccCeEEEEeCCCCCEEEEEeCCCCc--cEEEEE-CCC----------CceEEEEEEeCCCEEEEEECCCCEE
Confidence 467888886655555443 2455553333221 222111 110 14678999987654 4555667899
Q ss_pred EEEeCCCccceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCceeEE
Q psy1859 93 NIWDGFNKKRLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL 157 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v 157 (162)
..+|+........... .-.....+ +. .+.++++-...+.|..+|..+++.+..+........+|
T Consensus 271 ~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i 337 (400)
T 3p5b_L 271 SSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDM 337 (400)
T ss_dssp EEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEE
T ss_pred EEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceE
Confidence 9999865433222221 12233445 42 33445555566789989977776555554333334444
No 295
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.18 E-value=0.075 Score=39.08 Aligned_cols=74 Identities=12% Similarity=0.183 Sum_probs=48.8
Q ss_pred EEecCCCCE----EEEecCCCeEEEEeCCCccceeeeeeccc----ceeEE-EcCCCCEEEEec------CCCeEEEEeC
Q psy1859 74 ISFHQEYNT----FATGGSDGYVNIWDGFNKKRLCQFHRYDT----GITSL-FHQEYNTFATGG------SDGYVNIWDG 138 (162)
Q Consensus 74 ~~~~p~~~~----l~~~~~d~~v~~wd~~~~~~~~~~~~~~~----~v~~~-~~~~~~~l~~~~------~d~~i~iwd~ 138 (162)
++++|.+.. ++.++.|+.|..+|..+|+.+.+...... .+... .-.++ .+++++ .++.|+.+|.
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~ 189 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDV 189 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEET
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEEC
Confidence 445443333 77888899999999999988766543221 22221 11134 555554 3799999999
Q ss_pred CCceeeeeec
Q psy1859 139 FNKKRLCQFH 148 (162)
Q Consensus 139 ~~~~~~~~~~ 148 (162)
++|+.+.++.
T Consensus 190 ~TG~~~W~~~ 199 (599)
T 1w6s_A 190 KTGEQVWRAY 199 (599)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEEc
Confidence 9999887765
No 296
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.15 E-value=0.017 Score=36.89 Aligned_cols=65 Identities=6% Similarity=-0.084 Sum_probs=42.4
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccc------eeeeee-cccceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKR------LCQFHR-YDTGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~------~~~~~~-~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
.+..++|+|++.+.++ .+|.++-.+..+... -..+-. .-.....+ |.|+|.+.++ .||.|.-++-
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 5779999999887777 778777777654211 111110 11124677 9999987777 5588876765
No 297
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.06 E-value=0.021 Score=41.59 Aligned_cols=48 Identities=19% Similarity=0.277 Sum_probs=32.7
Q ss_pred CCCEEEEecCCCeEEEEeCCCccceeeeeecccce-eEE-EcCCCCEEEE
Q psy1859 79 EYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGI-TSL-FHQEYNTFAT 126 (162)
Q Consensus 79 ~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v-~~~-~~~~~~~l~~ 126 (162)
.+.+++.++.|+.|+.+|.++++.+.++....... .-+ +..+|+.++.
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 35667778999999999999999988876433221 122 5567764443
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.04 E-value=0.2 Score=34.28 Aligned_cols=121 Identities=13% Similarity=0.122 Sum_probs=73.8
Q ss_pred EEEEE--eeC-CC-eEEEEcCCCcEEEEEecCC-c--ccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC
Q psy1859 17 RCIKC--FPN-KQ-GYVLSSIEGRAAVEYLDTG-P--EMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD 89 (162)
Q Consensus 17 ~~i~~--~~~-~~-~l~~~~~~g~i~i~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 89 (162)
.-+++ +|. ++ ++++...+|.+..|.+... . ...+.+..+.... .+..+...+....|..+-.+
T Consensus 131 yGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs----------q~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 131 YGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS----------QTEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp CCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS----------CEEEEEEETTTTEEEEEETT
T ss_pred eEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC----------CcceEEEcCCCCeEEEeccc
Confidence 34565 564 44 5666777888887666432 1 1123334433322 58899999988888888888
Q ss_pred CeEEEEeCCC-----ccceeeee--ecccceeEE-E--cCCCC-EEEEec-CCCeEEEEeCC-Cceeeeee
Q psy1859 90 GYVNIWDGFN-----KKRLCQFH--RYDTGITSL-F--HQEYN-TFATGG-SDGYVNIWDGF-NKKRLCQF 147 (162)
Q Consensus 90 ~~v~~wd~~~-----~~~~~~~~--~~~~~v~~~-~--~~~~~-~l~~~~-~d~~i~iwd~~-~~~~~~~~ 147 (162)
.-|+.++.+. ++.+..+. .....+..+ + .++++ +|++++ .++++.+||.. +.+.+..+
T Consensus 201 ~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 201 EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 7788888552 23343332 112356666 3 56666 666666 67799999996 55555555
No 299
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.91 E-value=0.23 Score=33.90 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=55.8
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC----CCEEEEecC--
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE----YNTFATGGS-- 88 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~l~~~~~-- 88 (162)
....++|.|+++.+++ ..+|.|.+ ++... . +.+..+..... -......|+++|+ +.++++-+.
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~--~d~~G-~-~~~~~~~v~~~------g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVL--ISPSG-K-KLVASFDVANV------GEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEE--ECSSC-E-EEEEECCCCCS------TTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEE--EeCCC-c-eEeeccceeec------CCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 3468999999985555 55588877 45322 1 22221110000 0125789999997 445444432
Q ss_pred -C----CeEEEEeCCCc--c-----ce-eeeee-cccceeEE-EcCCCCEEEEec
Q psy1859 89 -D----GYVNIWDGFNK--K-----RL-CQFHR-YDTGITSL-FHQEYNTFATGG 128 (162)
Q Consensus 89 -d----~~v~~wd~~~~--~-----~~-~~~~~-~~~~v~~~-~~~~~~~l~~~~ 128 (162)
+ ..|..|+.... . .+ ..+.. .......+ |.|||.++++.+
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 3 56777776543 1 11 11221 11123567 999998777653
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.80 E-value=0.38 Score=35.55 Aligned_cols=134 Identities=6% Similarity=-0.084 Sum_probs=71.4
Q ss_pred EEEEEEeeCCCeEEEEcC-CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeEE
Q psy1859 16 TRCIKCFPNKQGYVLSSI-EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYVN 93 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~-~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v~ 93 (162)
...+++++.+..++.+.. .+.|..++.+.... .+.+.. .+. .....+++.+.+ +++++-...+.|.
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~-~~~v~~-~~~----------~~P~GlAvD~~~~~ly~~d~~~~~I~ 109 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-VQNVVV-SGL----------LSPDGLACDWLGEKLYWTDSETNRIE 109 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEEC-SSC----------SCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc-eEEEEe-CCC----------CCcCeEEEEecCCEEEEEeCCCCEEE
Confidence 457888886666655543 45555544332210 011111 110 147789999855 5666667789999
Q ss_pred EEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC--CCeEEEEeCCCceeeeeeccCCCceeEEEecC
Q psy1859 94 IWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS--DGYVNIWDGFNKKRLCQFHRYDTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 161 (162)
+.++........+...-.....+ ++|.+.+|+.+.. .+.|...++............-.....|+++|
T Consensus 110 v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~ 180 (619)
T 3s94_A 110 VSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDY 180 (619)
T ss_dssp EEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEET
T ss_pred EEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEc
Confidence 99987543222222233446677 8887666655543 46777777643222111211223456666664
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.72 E-value=0.41 Score=35.37 Aligned_cols=76 Identities=8% Similarity=0.002 Sum_probs=43.3
Q ss_pred ceEEEEecCCC-CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEe-cCCCeEEEEeCCCceeeee
Q psy1859 70 PVNAISFHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATG-GSDGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~ 146 (162)
....+++++++ +++++-...+.|...|+..................+ +..+ .++.+ ...+.|...|..+++....
T Consensus 172 ~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEE
T ss_pred CCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEE
Confidence 46789999875 555555677889999987543322222112222344 4433 44444 4667899999877764444
Q ss_pred e
Q psy1859 147 F 147 (162)
Q Consensus 147 ~ 147 (162)
+
T Consensus 250 i 250 (619)
T 3s94_A 250 I 250 (619)
T ss_dssp C
T ss_pred E
Confidence 3
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.69 E-value=0.28 Score=33.36 Aligned_cols=68 Identities=12% Similarity=0.176 Sum_probs=43.4
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCcc--ceeeee---ecccceeEE-EcCC---CCEEEEecC-C-----CeEE
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKK--RLCQFH---RYDTGITSL-FHQE---YNTFATGGS-D-----GYVN 134 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~--~~~~~~---~~~~~v~~~-~~~~---~~~l~~~~~-d-----~~i~ 134 (162)
....++|.|+|+++++. .++.|.+++ +++ .+..+. ........+ ++|+ +..|+++.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 36789999999866665 559999998 333 222221 123456778 9998 555555443 2 5777
Q ss_pred EEeCCC
Q psy1859 135 IWDGFN 140 (162)
Q Consensus 135 iwd~~~ 140 (162)
.++...
T Consensus 109 r~~~~~ 114 (352)
T 2ism_A 109 RLRHLG 114 (352)
T ss_dssp EEEECS
T ss_pred EEEeCC
Confidence 787764
No 303
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.69 E-value=0.47 Score=35.85 Aligned_cols=133 Identities=11% Similarity=0.006 Sum_probs=72.7
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+.++...+++.. -.|+.++-+.. ++..+...... . .... .....|.++...+++.+.+ |+.++-+.
T Consensus 363 ~~v~~i~~d~~g~l-Wigt~~~Gl~~--~~~~~~~~~~~-~-~~~~------~~~~~v~~i~~d~~g~lWi-gt~~~Gl~ 430 (781)
T 3v9f_A 363 KVVSSVCDDGQGKL-WIGTDGGGINV--FENGKRVAIYN-K-ENRE------LLSNSVLCSLKDSEGNLWF-GTYLGNIS 430 (781)
T ss_dssp SCEEEEEECTTSCE-EEEEBSSCEEE--EETTEEEEECC-------------CCCSBEEEEEECTTSCEEE-EETTEEEE
T ss_pred cceEEEEEcCCCCE-EEEeCCCcEEE--EECCCCeEEEc-c-CCCC------CCCcceEEEEECCCCCEEE-EeccCCEE
Confidence 45677777776664 45565555565 55443111111 0 0000 0112588998888777655 56666788
Q ss_pred EEeCCCccceeeee---ecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-----CCceeEEEecC
Q psy1859 94 IWDGFNKKRLCQFH---RYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRY-----DTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~~~~~~~~~~~---~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~v~~~p 161 (162)
.+|..+++.. .+. .....+.++ ..+++.+.+. +. +-|..+|..+++........ ...|.++...+
T Consensus 431 ~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 504 (781)
T 3v9f_A 431 YYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS 504 (781)
T ss_dssp EECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT
T ss_pred EEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcC
Confidence 8998765432 221 123567777 7777765444 44 56888998766533222111 24566665543
No 304
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.59 E-value=0.034 Score=40.64 Aligned_cols=48 Identities=23% Similarity=0.347 Sum_probs=34.0
Q ss_pred CCEEEEecCCCeEEEEeCCCccceeeeeeccccee-EE-EcCCCC-EEEEe
Q psy1859 80 YNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGIT-SL-FHQEYN-TFATG 127 (162)
Q Consensus 80 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~-~~-~~~~~~-~l~~~ 127 (162)
+.+++.++.|+.++.||.++++.+.+++....... -+ +..+|+ |+++.
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 56777799999999999999999888765433222 23 667776 44433
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.47 E-value=0.52 Score=34.91 Aligned_cols=92 Identities=7% Similarity=-0.159 Sum_probs=55.5
Q ss_pred ceEEEEecCCC-CEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEE-EEecCCCeEEEEeCCCceeeee
Q psy1859 70 PVNAISFHQEY-NTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTF-ATGGSDGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~ 146 (162)
.+.+++|++.+ .++.+-..++.|..+++........+.........+ +++.+..| ++-...+.|.+.++........
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL 117 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE
Confidence 47899999865 555566678999999987543332332222345567 77655545 4444667899999864432111
Q ss_pred eccCCCceeEEEecC
Q psy1859 147 FHRYDTGITSLCFSY 161 (162)
Q Consensus 147 ~~~~~~~v~~v~~~p 161 (162)
+...-....+|++.|
T Consensus 118 ~~~~l~~P~~iavdp 132 (628)
T 4a0p_A 118 VWKDLDSPRALALDP 132 (628)
T ss_dssp ECSSCCCEEEEEEET
T ss_pred EeCCCCCcccEEEcc
Confidence 212223456777765
No 306
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.44 E-value=0.28 Score=35.89 Aligned_cols=102 Identities=9% Similarity=-0.023 Sum_probs=62.4
Q ss_pred EEEEEeeCCCeEEEE-cCCCcEEEEEecCCcc-------cce--eeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 17 RCIKCFPNKQGYVLS-SIEGRAAVEYLDTGPE-------MQK--MKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~-~~~g~i~i~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
..+..+|||++++++ -.+.++.+++++.-.. ..+ ...... . + -.....+|.++|+...+.
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~----G----lGPlHt~Fd~~G~aYTtl 395 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--L----G----LGPLHTTFDGRGNAYTTL 395 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--C----C----SCEEEEEECSSSEEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--C----C----CcccEEEECCCCceEeee
Confidence 347899999998776 4467899977652110 000 011111 0 1 146788999999777777
Q ss_pred cCCCeEEEEeCCCc----------cceeeeeecccceeEE------EcCCCCEEEEec
Q psy1859 87 GSDGYVNIWDGFNK----------KRLCQFHRYDTGITSL------FHQEYNTFATGG 128 (162)
Q Consensus 87 ~~d~~v~~wd~~~~----------~~~~~~~~~~~~v~~~------~~~~~~~l~~~~ 128 (162)
.-|.+|..|++... ..+.++..|-++-... -.|+|++|++..
T Consensus 396 fidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 396 FIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp TTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 89999999999753 2233443332222211 357899998885
No 307
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.41 E-value=0.56 Score=37.39 Aligned_cols=68 Identities=13% Similarity=0.201 Sum_probs=41.6
Q ss_pred eEEEEecCC-CCEEEEec----------CCCeEEEEeCCCccceeee-eecccceeEE--EcCCCCEEEEecCCCeEEEE
Q psy1859 71 VNAISFHQE-YNTFATGG----------SDGYVNIWDGFNKKRLCQF-HRYDTGITSL--FHQEYNTFATGGSDGYVNIW 136 (162)
Q Consensus 71 v~~~~~~p~-~~~l~~~~----------~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~--~~~~~~~l~~~~~d~~i~iw 136 (162)
+..+.|..+ ..+++.|+ ..|.|.+|++.+++..... ...+++++++ | +|++++.. ..+|++|
T Consensus 834 v~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~--~g~Lla~i--g~~l~vy 909 (1158)
T 3ei3_A 834 LVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF--NGKLLASI--NSTVRLY 909 (1158)
T ss_dssp EEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE--TTEEEEEE--TTEEEEE
T ss_pred EEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee--CCEEEEEc--CCEEEEE
Confidence 444445443 36787775 3588999998754322211 1346778888 6 35444433 4689999
Q ss_pred eCCCce
Q psy1859 137 DGFNKK 142 (162)
Q Consensus 137 d~~~~~ 142 (162)
++...+
T Consensus 910 ~l~~~~ 915 (1158)
T 3ei3_A 910 EWTTEK 915 (1158)
T ss_dssp EECTTS
T ss_pred ECCCCc
Confidence 997654
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.39 E-value=0.27 Score=32.32 Aligned_cols=107 Identities=14% Similarity=0.135 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCCc---EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC-----CeEEEE
Q psy1859 24 NKQGYVLSSIEGR---AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD-----GYVNIW 95 (162)
Q Consensus 24 ~~~~l~~~~~~g~---i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d-----~~v~~w 95 (162)
+++.++.|+.++. -.+|.+|..+.....+..+...+. ....+.+ ++++++.|+.+ ..+.+|
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---------~~~~~~~--~~~i~v~GG~~~~~~~~~v~~y 227 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS---------GAGVALL--NDHIYVVGGFDGTAHLSSVEAY 227 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB---------SCEEEEE--TTEEEEECCBCSSSBCCCEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc---------cceEEEE--CCEEEEEeCCCCCcccceEEEE
Confidence 5667777765432 224446665533443322221111 1122222 46777777764 468899
Q ss_pred eCCCcccee--eeeecccceeEEEcCCCCEEEEecCC-----CeEEEEeCCCce
Q psy1859 96 DGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSD-----GYVNIWDGFNKK 142 (162)
Q Consensus 96 d~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 142 (162)
|+.+.+... .+.........+ .-++++++.|+.+ ..+.+||+++.+
T Consensus 228 d~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 228 NIRTDSWTTVTSMTTPRCYVGAT-VLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred eCCCCcEEECCCCCCcccceeEE-EECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 998764332 222111112222 2267777887755 467899998765
No 309
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.30 E-value=0.67 Score=35.04 Aligned_cols=131 Identities=12% Similarity=0.069 Sum_probs=70.5
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
..+.++...+++...+ |+.++-+.. ++..+...+... .... ....|.++...+++.+.+.. . +-+.
T Consensus 407 ~~v~~i~~d~~g~lWi-gt~~~Gl~~--~~~~~~~~~~~~-~~~~--------~~~~v~~i~~d~~g~lwigt-~-~Gl~ 472 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWF-GTYLGNISY--YNTRLKKFQIIE-LEKN--------ELLDVRVFYEDKNKKIWIGT-H-AGVF 472 (781)
T ss_dssp SBEEEEEECTTSCEEE-EETTEEEEE--ECSSSCEEEECC-STTT--------CCCCEEEEEECTTSEEEEEE-T-TEEE
T ss_pred cceEEEEECCCCCEEE-EeccCCEEE--EcCCCCcEEEec-cCCC--------CCCeEEEEEECCCCCEEEEE-C-CceE
Confidence 4566777666666444 555454555 555431111111 0000 11258899888877655544 4 5688
Q ss_pred EEeCCCccceeeeeec-----ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc----CCCceeEEEec
Q psy1859 94 IWDGFNKKRLCQFHRY-----DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR----YDTGITSLCFS 160 (162)
Q Consensus 94 ~wd~~~~~~~~~~~~~-----~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~v~~~ 160 (162)
.+|..+++........ ...+.++ ..++|.+.+.....| |..+|..+++... +.. ....|.++...
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~-~~~~~~l~~~~i~~i~~d 547 (781)
T 3v9f_A 473 VIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRK-FNQYEGFCSNTINQIYRS 547 (781)
T ss_dssp EEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEE-ECTTTTCSCSCEEEEEEC
T ss_pred EEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEE-ccCCCCCCCCeeEEEEEC
Confidence 8998765433221111 3567788 888887655543344 7778887654332 221 12346666554
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.14 E-value=0.43 Score=32.01 Aligned_cols=134 Identities=13% Similarity=0.127 Sum_probs=69.3
Q ss_pred cccccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC
Q psy1859 11 SLKFQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG 90 (162)
Q Consensus 11 ~~~~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 90 (162)
.....+..+++.+++.+++++. +|.+.. ..|......+.... .. ...+..+++.+++.+++.+ .+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~-~G~~~~-S~d~gG~tW~~~~~--~~---------~~~~~~~~~~~~g~~~~~~-~~G 225 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSS-RGSFYS-TWEPGQTAWEPHNR--TT---------SRRLHNMGFTPDGRLWMIV-NGG 225 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEET-TSSEEE-EECTTCSSCEEEEC--CS---------SSCEEEEEECTTSCEEEEE-TTT
T ss_pred CCCcceEEEEEcCCCcEEEEEC-CCcEEE-EeCCCCCceeECCC--CC---------CCccceeEECCCCCEEEEe-CCc
Confidence 3344567788888877766654 444433 12321111222211 11 1257888899988766544 578
Q ss_pred eEEEEeCCCccceeeeee----cccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec---cCCCceeEEEec
Q psy1859 91 YVNIWDGFNKKRLCQFHR----YDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH---RYDTGITSLCFS 160 (162)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~----~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~v~~v~~~ 160 (162)
.+++.+...++.-..+.. ....+..+ +.+++..++++. ++.| ++....++.-..+. .....+.++.|.
T Consensus 226 ~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~ 301 (327)
T 2xbg_A 226 KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFF 301 (327)
T ss_dssp EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEE
T ss_pred eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEE
Confidence 777764332332222221 12346778 888877776664 5655 34444443222222 123456677664
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.12 E-value=0.3 Score=32.13 Aligned_cols=64 Identities=19% Similarity=0.256 Sum_probs=38.0
Q ss_pred CCCEEEEecCC-----CeEEEEeCCCcccee--eeeecccceeEEEcCCCCEEEEecCCC-----eEEEEeCCCcee
Q psy1859 79 EYNTFATGGSD-----GYVNIWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSDG-----YVNIWDGFNKKR 143 (162)
Q Consensus 79 ~~~~l~~~~~d-----~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~ 143 (162)
++++++.|+.+ ..+.+||+.+.+... .+.........+ .-++++++.|+.++ .+.+||+.+.+-
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 46777787754 468899998754322 221111111122 22677778877553 589999987753
No 312
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.09 E-value=0.095 Score=35.67 Aligned_cols=111 Identities=13% Similarity=0.183 Sum_probs=61.9
Q ss_pred CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEe--cC-CCCEEEEe-cCCCeEEEEeCCCcc
Q psy1859 26 QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISF--HQ-EYNTFATG-GSDGYVNIWDGFNKK 101 (162)
Q Consensus 26 ~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p-~~~~l~~~-~~d~~v~~wd~~~~~ 101 (162)
..+++++.||.+.- +|..+ .+..+.++..... ++....- .+ ++..++.. +.||.|..++..+|.
T Consensus 11 ~~V~v~t~dG~l~A--ld~~t--G~~~W~~~~~~~~--------p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~ 78 (339)
T 2be1_A 11 DILIAADVEGGLHA--VDRRN--GHIIWSIEPENFQ--------PLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL 78 (339)
T ss_dssp EEEEEEETTSCEEE--EETTT--TEEEEEECGGGSC--------CSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE
T ss_pred CEEEEEeCCCeEEE--EECCC--CcEEEEecCCccC--------CcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc
Confidence 35667777777766 55554 4444443322000 1111100 01 22334343 689999999988875
Q ss_pred ceeeeeec----ccceeE---E-E-c----CCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 102 RLCQFHRY----DTGITS---L-F-H----QEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 102 ~~~~~~~~----~~~v~~---~-~-~----~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
....+... ..++.. . . . -.+..+++|+.++.+...|+++|+.+..+.
T Consensus 79 ~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 79 QKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp EEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred EEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 44333211 111110 0 1 0 145678999999999999999999988875
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.00 E-value=0.31 Score=32.12 Aligned_cols=105 Identities=10% Similarity=0.100 Sum_probs=54.8
Q ss_pred CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC----CeEEEEeCCCcc
Q psy1859 26 QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD----GYVNIWDGFNKK 101 (162)
Q Consensus 26 ~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d----~~v~~wd~~~~~ 101 (162)
..++.|+.+..-.+|.+|..+.....+..+...+. .-..+.+ ++.+++.|+.+ ..+.+||..+.+
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~---------~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRR---------DAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDS 81 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCB---------SCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTE
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccc---------eeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCe
Confidence 34566665433334557766543443332222111 1122222 46677777754 678889988764
Q ss_pred ceee--eeecccceeEEEcCCCCEEEEecCC------CeEEEEeCCCce
Q psy1859 102 RLCQ--FHRYDTGITSLFHQEYNTFATGGSD------GYVNIWDGFNKK 142 (162)
Q Consensus 102 ~~~~--~~~~~~~v~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~ 142 (162)
.... +.........+ .-++++++.|+.+ ..+.+||..+.+
T Consensus 82 W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 82 WYSKLGPPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp EEEEECCSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred EEECCCCCccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 3322 21111111222 2266777777754 468899988765
No 314
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.00 E-value=0.52 Score=32.20 Aligned_cols=107 Identities=13% Similarity=-0.017 Sum_probs=57.2
Q ss_pred cEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCC----CCEEEEe--cC
Q psy1859 15 QTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQE----YNTFATG--GS 88 (162)
Q Consensus 15 ~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~l~~~--~~ 88 (162)
....|++.|+|+.+++--..|.|.+ ++........+..+..- ...-......|+++|+ +.+.++- ..
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~--v~~~~g~~~~v~~~~~v-----~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITR--VDAKTGRKTELGEVPGV-----SPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEE--ECTTTCCEEEEEECTTC-----CCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred CceEEEEcCCCcEEEEEecCCEEEE--EECCCCcEeeecccCce-----eecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 4468999999987777555788877 55432212222111100 0001125789999995 4444432 24
Q ss_pred CCeEEEEeCCCcc--------c--e-eeeee-cccceeEE-EcCCCCEEEEec
Q psy1859 89 DGYVNIWDGFNKK--------R--L-CQFHR-YDTGITSL-FHQEYNTFATGG 128 (162)
Q Consensus 89 d~~v~~wd~~~~~--------~--~-~~~~~-~~~~v~~~-~~~~~~~l~~~~ 128 (162)
++.|.-|.+..+. . + ..+.. .......+ |.|||.+.++.+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 5566666655411 1 1 11211 11234457 999998777754
No 315
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.69 E-value=0.78 Score=35.80 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=29.7
Q ss_pred eeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy1859 113 ITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 147 (162)
Q Consensus 113 v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 147 (162)
+.++ ..++..++++-+.|+++|+|++.+++++.+.
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4455 6678889999999999999999999887765
No 316
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.59 E-value=0.69 Score=31.69 Aligned_cols=89 Identities=15% Similarity=0.195 Sum_probs=58.8
Q ss_pred ceEEEEe--cCC-CC-EEEEecCCCeEEEEeCC-------CccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEe
Q psy1859 70 PVNAISF--HQE-YN-TFATGGSDGYVNIWDGF-------NKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWD 137 (162)
Q Consensus 70 ~v~~~~~--~p~-~~-~l~~~~~d~~v~~wd~~-------~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd 137 (162)
.+..+++ +|. +. ++++...+|.+..|++. +.+.++++.. .+.+..+ ..+....|+.+-++..|..++
T Consensus 129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~d 207 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFS 207 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEe
Confidence 4667777 775 43 56677788999999883 2355666654 3566677 888888999999987787778
Q ss_pred CC-----Cceeeeeec-c-CCCceeEEEe
Q psy1859 138 GF-----NKKRLCQFH-R-YDTGITSLCF 159 (162)
Q Consensus 138 ~~-----~~~~~~~~~-~-~~~~v~~v~~ 159 (162)
.+ +++.+..+. + -...+..|+.
T Consensus 208 a~p~~~~~~~~v~~~~~g~l~aDvEGLai 236 (355)
T 3amr_A 208 AEPDGGSNGTVIDRADGRHLTRDIEGLTI 236 (355)
T ss_dssp CSTTSCSCCEEEEEBSSSSBCSCEEEEEE
T ss_pred CCcCCCCCceEEEEecCCccccCcceEEE
Confidence 55 344554442 1 1224555555
No 317
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.51 E-value=0.66 Score=31.12 Aligned_cols=131 Identities=11% Similarity=0.104 Sum_probs=68.9
Q ss_pred ccEEEEEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEE
Q psy1859 14 FQTRCIKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVN 93 (162)
Q Consensus 14 ~~~~~i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~ 93 (162)
+....+.+.+++..++++ .+|.+.. ..|... ..+... .... ..+..+++.|++.+++.+...+..+
T Consensus 122 ~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~-tW~~~~--~~~~---------~~~~~~~~~~~~~~~~~g~~G~~~~ 187 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGK-NWQALV--QEAI---------GVMRNLNRSPSGEYVAVSSRGSFYS 187 (327)
T ss_dssp SCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTS-SEEEEE--CSCC---------CCEEEEEECTTSCEEEEETTSSEEE
T ss_pred CCeEEEEEECCCCEEEEe-CCccEEE-EcCCCC-CCEEee--cCCC---------cceEEEEEcCCCcEEEEECCCcEEE
Confidence 445677777766666554 4554432 133211 122211 1111 2578899999888887776555555
Q ss_pred EEeC--CCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeecc----CCCceeEEEecC
Q psy1859 94 IWDG--FNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR----YDTGITSLCFSY 161 (162)
Q Consensus 94 ~wd~--~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~v~~~p 161 (162)
-.|- .+.+.+. ......+..+ +.+++..++.+ .+|.+++.+...++.-..+.. ....+.++.|.|
T Consensus 188 S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~ 259 (327)
T 2xbg_A 188 TWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT 259 (327)
T ss_dssp EECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS
T ss_pred EeCCCCCceeECC--CCCCCccceeEECCCCCEEEEe-CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC
Confidence 5553 2233321 1234567777 88888766544 577777764332332222211 122466777654
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.25 E-value=0.69 Score=30.32 Aligned_cols=107 Identities=16% Similarity=0.177 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCCc---EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC-----CeEEEE
Q psy1859 24 NKQGYVLSSIEGR---AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD-----GYVNIW 95 (162)
Q Consensus 24 ~~~~l~~~~~~g~---i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d-----~~v~~w 95 (162)
+++.++.|+.++. -.+|.+|..+........+...+. .-..+.+ ++++++.|+.+ ..+.+|
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---------~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 180 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTARE---------GAGLVVA--SGVIYCLGGYDGLNILNSVEKY 180 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCB---------SCEEEEE--TTEEEEECCBCSSCBCCCEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcc---------cceEEEE--CCEEEEECCCCCCcccceEEEE
Confidence 5677777765432 235557765533443322221111 1112222 56777777654 468889
Q ss_pred eCCCccceee--eeecccceeEEEcCCCCEEEEecCC-----CeEEEEeCCCce
Q psy1859 96 DGFNKKRLCQ--FHRYDTGITSLFHQEYNTFATGGSD-----GYVNIWDGFNKK 142 (162)
Q Consensus 96 d~~~~~~~~~--~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 142 (162)
|+.+.+.... +.........+ .-++++++.|+.+ ..+.+||+.+.+
T Consensus 181 d~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 181 DPHTGHWTNVTPMATKRSGAGVA-LLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eCCCCcEEeCCCCCcccccceEE-EECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 9877543322 21111111222 2256777777754 468999998765
No 319
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=94.10 E-value=0.54 Score=37.37 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=27.8
Q ss_pred EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 117 FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 117 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
..++..++++-+.|+++|+|++.+++++.+..
T Consensus 245 ~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 245 FLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp EETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 55678899999999999999999999887753
No 320
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.82 E-value=0.97 Score=30.47 Aligned_cols=95 Identities=19% Similarity=0.169 Sum_probs=46.0
Q ss_pred CCCeEEEEcCCCcEEEEEecCCc--ccceeeeeee-eeeeccCcccceeceEEEEecCCCCEEEEecC-C---------C
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGP--EMQKMKYAFK-CHRIKEDGIEKIYPVNAISFHQEYNTFATGGS-D---------G 90 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d---------~ 90 (162)
+++.++.|+.++. .+|.+|... .....+..+. ..+. ....+.+ ++.+++.|+. + .
T Consensus 19 ~~~iyv~GG~~~~-~~~~~d~~~~~~~W~~~~~~p~~~R~---------~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 86 (357)
T 2uvk_A 19 NDTVYIGLGSAGT-AWYKLDTQAKDKKWTALAAFPGGPRD---------QATSAFI--DGNLYVFGGIGKNSEGLTQVFN 86 (357)
T ss_dssp TTEEEEECGGGTT-CEEEEETTSSSCCEEECCCCTTCCCB---------SCEEEEE--TTEEEEECCEEECTTSCEEECC
T ss_pred CCEEEEEeCcCCC-eEEEEccccCCCCeeECCCCCCCcCc---------cceEEEE--CCEEEEEcCCCCCCCccceeec
Confidence 6777777765543 345566542 2233332222 1111 1112222 4677777765 2 4
Q ss_pred eEEEEeCCCcccee--eeeecccceeEEEcCCCCEEEEecCC
Q psy1859 91 YVNIWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSD 130 (162)
Q Consensus 91 ~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d 130 (162)
.+.+||..+.+... .+......-..+...++++++.|+.+
T Consensus 87 ~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 87 DVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp CEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 68899988754332 22201111112222467777888754
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.82 E-value=0.87 Score=29.90 Aligned_cols=107 Identities=18% Similarity=0.208 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCc---EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC-------CeEE
Q psy1859 24 NKQGYVLSSIEGR---AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD-------GYVN 93 (162)
Q Consensus 24 ~~~~l~~~~~~g~---i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d-------~~v~ 93 (162)
+++.++.|+.++. -.+|.+|..+........+...+. ....+.+ ++++++.|+.+ ..+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---------~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 176 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRS---------SVGVGVV--GGLLYAVGGYDVASRQCLSTVE 176 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCB---------SCEEEEE--TTEEEEECCEETTTTEECCCEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCccc---------CceEEEE--CCEEEEEeCCCCCCCccccEEE
Confidence 5667777765432 235667766543444332221111 1112222 46677777542 4588
Q ss_pred EEeCCCcccee--eeeecccceeEEEcCCCCEEEEecCC-----CeEEEEeCCCce
Q psy1859 94 IWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSD-----GYVNIWDGFNKK 142 (162)
Q Consensus 94 ~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 142 (162)
+||+.+.+... .+.........+ .-++++++.|+.+ ..+.+||+.+.+
T Consensus 177 ~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 177 CYNATTNEWTYIAEMSTRRSGAGVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred EEeCCCCcEEECCCCccccccccEE-EECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 89988754332 222111112222 1256777777754 468899998765
No 322
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.51 E-value=1.7 Score=32.25 Aligned_cols=117 Identities=8% Similarity=-0.072 Sum_probs=66.0
Q ss_pred EEEEEEeeCCCeEEEEcC--CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC-CEEEEecCCCeE
Q psy1859 16 TRCIKCFPNKQGYVLSSI--EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY-NTFATGGSDGYV 92 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~--~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~v 92 (162)
...|++.|....|+.+.. .+.|.. .+........+. .. . .....+++++++ +++.+-...+.|
T Consensus 125 P~~iavdp~~G~lY~tD~g~~~~I~r--~~~dG~~~~~l~--~~--~--------~~P~GlalD~~~~~LY~aD~~~~~I 190 (628)
T 4a0p_A 125 PRALALDPAEGFMYWTEWGGKPKIDR--AAMDGSERTTLV--PN--V--------GRANGLTIDYAKRRLYWTDLDTNLI 190 (628)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEE--EETTSCSCEEEE--CS--C--------SSEEEEEEETTTTEEEEEETTTTEE
T ss_pred cccEEEccCCCeEEEeCCCCCCEEEE--EeCCCCceEEEE--CC--C--------CCcceEEEccccCEEEEEECCCCEE
Confidence 467888886555555443 344444 443321122222 11 1 146789999976 455555677899
Q ss_pred EEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCCceeeeeec
Q psy1859 93 NIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 148 (162)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 148 (162)
...|+..... ..+.........+ +.. +.++++-...+.|...|..+++....+.
T Consensus 191 ~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 191 ESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp EEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 9999875433 3333333334455 443 3444444457889999977776444443
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.49 E-value=1 Score=29.71 Aligned_cols=108 Identities=17% Similarity=0.211 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCCc---EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC-----CeEEEE
Q psy1859 24 NKQGYVLSSIEGR---AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD-----GYVNIW 95 (162)
Q Consensus 24 ~~~~l~~~~~~g~---i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d-----~~v~~w 95 (162)
+++.++.|+.++. -.+|.+|..+.....+..+...+. ....+.+ ++++++.|+.+ ..+.+|
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---------~~~~~~~--~~~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS---------GAGVCVL--HNCIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB---------SCEEEEE--TTEEEEECCBCSSSBCCCEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc---------cceEEEE--CCEEEEEeCCCCCCccceEEEE
Confidence 5667777765432 123446665533443322221111 1122222 56777787654 568899
Q ss_pred eCCCcccee--eeeecccceeEEEcCCCCEEEEecCC-----CeEEEEeCCCcee
Q psy1859 96 DGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSD-----GYVNIWDGFNKKR 143 (162)
Q Consensus 96 d~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~ 143 (162)
|+.+.+... .+.........+. -++++++.|+.+ ..+.+||+.+.+-
T Consensus 237 d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 237 DVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred eCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 988754332 2221111112222 256777777743 4688999987753
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.22 E-value=0.88 Score=34.12 Aligned_cols=109 Identities=13% Similarity=0.065 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCCc----EEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCC--eEEEEeC
Q psy1859 24 NKQGYVLSSIEGR----AAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDG--YVNIWDG 97 (162)
Q Consensus 24 ~~~~l~~~~~~g~----i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~--~v~~wd~ 97 (162)
+++.++.|+.++. -.+|.+|..+........+...+. -.+++.-.++.+++.|+.++ .+.+||.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~----------~h~~~~~~~~~iyv~GG~~~~~~v~~yd~ 520 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF----------RHSACSLPDGNVLILGGVTEGPAMLLYNV 520 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB----------SCEEEECTTSCEEEECCBCSSCSEEEEET
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc----------cceEEEEcCCEEEEECCCCCCCCEEEEEC
Confidence 6777777765431 135557766543444433222211 11222223678888887654 6899999
Q ss_pred CCccceeee-----eecccceeEE-EcCC-CCEEEEecC--C-----CeEEEEeCCCce
Q psy1859 98 FNKKRLCQF-----HRYDTGITSL-FHQE-YNTFATGGS--D-----GYVNIWDGFNKK 142 (162)
Q Consensus 98 ~~~~~~~~~-----~~~~~~v~~~-~~~~-~~~l~~~~~--d-----~~i~iwd~~~~~ 142 (162)
.+.+....- .........+ +..+ +++++.|+. + ..+.+||+.+..
T Consensus 521 ~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 521 TEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 876433221 1112222334 5554 667777765 2 468889987765
No 325
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.13 E-value=2.3 Score=33.31 Aligned_cols=37 Identities=14% Similarity=0.145 Sum_probs=31.4
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeee
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 106 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 106 (162)
.+.+++..++..++++-+.|+.+++|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677778888889999999999999999998876654
No 326
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.11 E-value=1.4 Score=33.06 Aligned_cols=112 Identities=13% Similarity=0.171 Sum_probs=59.6
Q ss_pred eCCCeEEEEcCCCcEEEEEecCCcccceeeee---eeeeeeccCcccceeceEEEEecCC-CCEEEEecC--C-----Ce
Q psy1859 23 PNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYA---FKCHRIKEDGIEKIYPVNAISFHQE-YNTFATGGS--D-----GY 91 (162)
Q Consensus 23 ~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~--d-----~~ 91 (162)
.+++.++.|+.++.-.+|.+|..+........ ....+. ...++.+..+ +++++.|+. + ..
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~---------~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~ 569 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSL---------VSAGLEFDPVSKQGIILGGGFMDQTTVSDK 569 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCC---------BSCEEEEETTTTEEEEECCBCTTSSCBCCE
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCccc---------ceeEEEEeCCCCEEEEECCcCCCCCeeeCc
Confidence 36788888866542244557766533443322 111111 1233555555 667777765 2 46
Q ss_pred EEEEeCCCccc-----eeeeee---cccceeEE-EcCCCCEEEEecC--------CCeEEEEeCCCcee
Q psy1859 92 VNIWDGFNKKR-----LCQFHR---YDTGITSL-FHQEYNTFATGGS--------DGYVNIWDGFNKKR 143 (162)
Q Consensus 92 v~~wd~~~~~~-----~~~~~~---~~~~v~~~-~~~~~~~l~~~~~--------d~~i~iwd~~~~~~ 143 (162)
+..||+.+.+. -..+.. ....-..+ ...++++++.|+. ...+.+||+.+.+-
T Consensus 570 v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 570 AIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred EEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 88999887662 111111 11111122 2333777777774 34689999987653
No 327
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.74 E-value=1.4 Score=29.02 Aligned_cols=108 Identities=13% Similarity=0.125 Sum_probs=55.1
Q ss_pred eCCCeEEEEcCC--CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC------CeEEE
Q psy1859 23 PNKQGYVLSSIE--GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD------GYVNI 94 (162)
Q Consensus 23 ~~~~~l~~~~~~--g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d------~~v~~ 94 (162)
-++..++.|+.+ ..-.+|.+|..+........+...+. ....+.+ ++++++.|+.+ ..+.+
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---------~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 122 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD---------SLAACAA--EGKIYTSGGSEVGNSALYLFEC 122 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB---------SCEEEEE--TTEEEEECCBBTTBSCCCCEEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc---------ceeEEEE--CCEEEEECCCCCCCcEeeeEEE
Confidence 356667777654 12234557766533443322221111 1112222 56777777754 46889
Q ss_pred EeCCCccceee--eeecccceeEEEcCCCCEEEEecC---------CCeEEEEeCCCce
Q psy1859 95 WDGFNKKRLCQ--FHRYDTGITSLFHQEYNTFATGGS---------DGYVNIWDGFNKK 142 (162)
Q Consensus 95 wd~~~~~~~~~--~~~~~~~v~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~ 142 (162)
||..+.+.... +.........+ .-++++++.|+. -..+.+||+.+.+
T Consensus 123 ~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 123 YDTRTESWHTKPSMLTQRCSHGMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred EeCCCCceEeCCCCcCCcceeEEE-EECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 99887643222 21111111122 125666777653 3458899998765
No 328
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.70 E-value=0.41 Score=32.33 Aligned_cols=55 Identities=15% Similarity=-0.035 Sum_probs=27.8
Q ss_pred eEEEEeCCCcccee--eeeecccceeEEEcCCCCEEEEecCCC------eEEEEeCCCceeeee
Q psy1859 91 YVNIWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSDG------YVNIWDGFNKKRLCQ 146 (162)
Q Consensus 91 ~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~ 146 (162)
.+.+||+.+.+... .+......... ..-++++++.|+.++ .+.++++++++.+..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVS-LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEE-EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCceeeCCCCCCCccccee-EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 57789988754332 22221222122 223677888887542 456668887775543
No 329
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.70 E-value=1.6 Score=29.87 Aligned_cols=98 Identities=9% Similarity=0.056 Sum_probs=59.3
Q ss_pred EEEEEEeeCCCeEEEEcC---------------CCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCC
Q psy1859 16 TRCIKCFPNKQGYVLSSI---------------EGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEY 80 (162)
Q Consensus 16 ~~~i~~~~~~~~l~~~~~---------------~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 80 (162)
...+.+.++|.++++... ...-.||.++..+ .+.. ..+-. ..+.++|+|++
T Consensus 167 pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~--~~~~--~~~l~----------~pNGia~spDg 232 (355)
T 3sre_A 167 VNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND--VRVV--AEGFD----------FANGINISPDG 232 (355)
T ss_dssp EEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC--CEEE--EEEES----------SEEEEEECTTS
T ss_pred CceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe--EEEe--ecCCc----------ccCcceECCCC
Confidence 467888888887776531 1234566676532 2211 12211 47899999999
Q ss_pred CEEE-EecCCCeEEEEeCCC-ccc--eeeeeecccceeEE-EcC-CCCEEEEec
Q psy1859 81 NTFA-TGGSDGYVNIWDGFN-KKR--LCQFHRYDTGITSL-FHQ-EYNTFATGG 128 (162)
Q Consensus 81 ~~l~-~~~~d~~v~~wd~~~-~~~--~~~~~~~~~~v~~~-~~~-~~~~l~~~~ 128 (162)
+.+. +-+..+.|..|++.. ++. .+.+ ...+..-.+ +.+ +|.+.+++.
T Consensus 233 ~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 233 KYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 6555 455778999999864 322 1223 223445566 888 588777664
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.65 E-value=1.4 Score=29.03 Aligned_cols=63 Identities=17% Similarity=0.198 Sum_probs=37.3
Q ss_pred CCCEEEEecCC-----CeEEEEeCCCcccee--eeeecccceeEEEcCCCCEEEEecCC-----CeEEEEeCCCce
Q psy1859 79 EYNTFATGGSD-----GYVNIWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSD-----GYVNIWDGFNKK 142 (162)
Q Consensus 79 ~~~~l~~~~~d-----~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 142 (162)
++.+++.|+.+ ..+.+||+.+.+... .+.........+.. ++++++.|+.+ ..+.+||+.+.+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 56777777654 458889988754322 22211112222211 56777777654 568999998765
No 331
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.64 E-value=1.6 Score=29.70 Aligned_cols=44 Identities=5% Similarity=-0.119 Sum_probs=28.0
Q ss_pred CCCCEEEEecCCCeEEEEeCCCc-eee--eee-ccCCCceeEEEecCC
Q psy1859 119 QEYNTFATGGSDGYVNIWDGFNK-KRL--CQF-HRYDTGITSLCFSYD 162 (162)
Q Consensus 119 ~~~~~l~~~~~d~~i~iwd~~~~-~~~--~~~-~~~~~~v~~v~~~pd 162 (162)
.+|.++++.-..+.|...++... +.. ..+ ......+.++++.||
T Consensus 275 ~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD 322 (354)
T 3a9g_A 275 LRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD 322 (354)
T ss_dssp GTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT
T ss_pred cCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC
Confidence 46777777767788888888643 221 222 222346888888886
No 332
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.85 E-value=2.5 Score=30.10 Aligned_cols=113 Identities=11% Similarity=-0.007 Sum_probs=56.1
Q ss_pred cEEEEEEeeCCC-eEEEEcCCCcEEEEEecCCccc-ceeeeeeeeeeeccCcccceeceEEEEecCC----CCEEEEecC
Q psy1859 15 QTRCIKCFPNKQ-GYVLSSIEGRAAVEYLDTGPEM-QKMKYAFKCHRIKEDGIEKIYPVNAISFHQE----YNTFATGGS 88 (162)
Q Consensus 15 ~~~~i~~~~~~~-~l~~~~~~g~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~l~~~~~ 88 (162)
+-..|++.|++. .++++...|.|++ ++..... ...+..+...-.......-......|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~--~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKI--LTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEE--ECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCceEEE--EeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 346899999986 5666677898888 4432210 1111111100000000001235789999996 444444322
Q ss_pred --C----------CeEEEEeCCCc----------cceeeee--ecccceeEE-EcCCCCEEEEecC
Q psy1859 89 --D----------GYVNIWDGFNK----------KRLCQFH--RYDTGITSL-FHQEYNTFATGGS 129 (162)
Q Consensus 89 --d----------~~v~~wd~~~~----------~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~ 129 (162)
+ ..|.-|.+..+ +.+..+. ........+ |.|||.+.++.+.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 14444555421 1222222 112335577 9999987776654
No 333
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.31 E-value=2.2 Score=28.41 Aligned_cols=65 Identities=8% Similarity=-0.103 Sum_probs=38.9
Q ss_pred EEecCCCCEEEEec----CCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecC-CCeEEEEeCCCcee
Q psy1859 74 ISFHQEYNTFATGG----SDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGS-DGYVNIWDGFNKKR 143 (162)
Q Consensus 74 ~~~~p~~~~l~~~~----~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~~i~iwd~~~~~~ 143 (162)
..|++++..|+-.. .+..|..-++.. .....+..+.. . ++++++.|+..+. ...|...++..+..
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE 179 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE
Confidence 36677887766554 345565566653 33344433222 4 6777887776654 57888888866543
No 334
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.03 E-value=2.6 Score=28.67 Aligned_cols=68 Identities=13% Similarity=0.062 Sum_probs=40.5
Q ss_pred ceEEEEecCCCC-EEEEecCCCeEEEEeCCCccc---eeee----eecccceeEE-EcCC---CCEEEEec-C-------
Q psy1859 70 PVNAISFHQEYN-TFATGGSDGYVNIWDGFNKKR---LCQF----HRYDTGITSL-FHQE---YNTFATGG-S------- 129 (162)
Q Consensus 70 ~v~~~~~~p~~~-~l~~~~~d~~v~~wd~~~~~~---~~~~----~~~~~~v~~~-~~~~---~~~l~~~~-~------- 129 (162)
....|+|.|+++ ++++. ..|.|++++.. ++. +..+ .........+ ++|+ +.+|+... .
T Consensus 19 ~P~~i~~~pdG~~l~V~e-~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITL-RGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEEEE-TTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEEEe-CCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 467999999998 66554 57999999854 322 1111 1123345778 9995 44444442 2
Q ss_pred CCeEEEEeCC
Q psy1859 130 DGYVNIWDGF 139 (162)
Q Consensus 130 d~~i~iwd~~ 139 (162)
...|..+++.
T Consensus 97 ~~~v~r~~~~ 106 (353)
T 2g8s_A 97 GTAVGYGRLS 106 (353)
T ss_dssp EEEEEEEEEC
T ss_pred eeEEEEEEEC
Confidence 2356666654
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.95 E-value=2.7 Score=28.74 Aligned_cols=53 Identities=11% Similarity=0.085 Sum_probs=36.7
Q ss_pred ccceeEE-EcCCCCEEEEecCCCeEEEEeCCCcee--eeee----ccCCCceeEEEecCC
Q psy1859 110 DTGITSL-FHQEYNTFATGGSDGYVNIWDGFNKKR--LCQF----HRYDTGITSLCFSYD 162 (162)
Q Consensus 110 ~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~----~~~~~~v~~v~~~pd 162 (162)
-.....+ |.|+|+++++--..|.|++++..+++. +..+ .........|+|+||
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 3456678 999999888776689999998765543 2222 123456788999885
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.38 E-value=3.6 Score=29.20 Aligned_cols=58 Identities=12% Similarity=0.143 Sum_probs=37.1
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccc--eeeeee------cccceeEE-EcCC---CCEEEEe
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKR--LCQFHR------YDTGITSL-FHQE---YNTFATG 127 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~--~~~~~~------~~~~v~~~-~~~~---~~~l~~~ 127 (162)
....|+|.|+|+++++....+.|++++..+++. +..+.. .......+ |+|+ ..+|..+
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 367999999999888776556788887655432 222211 23456678 9995 4544444
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=89.64 E-value=3.1 Score=27.47 Aligned_cols=63 Identities=16% Similarity=0.188 Sum_probs=35.3
Q ss_pred CCCEEEEecCC-------CeEEEEeCCCccceee--eeecccceeEEEcCCCCEEEEecC------CCeEEEEeCCCce
Q psy1859 79 EYNTFATGGSD-------GYVNIWDGFNKKRLCQ--FHRYDTGITSLFHQEYNTFATGGS------DGYVNIWDGFNKK 142 (162)
Q Consensus 79 ~~~~l~~~~~d-------~~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~ 142 (162)
++.+++.|+.+ ..+.+||..+.+.... +...... .++...++++++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEEETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 46777777653 3577888887543321 1111111 1122236677777763 2358899998765
No 338
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.63 E-value=2.7 Score=31.01 Aligned_cols=58 Identities=12% Similarity=0.125 Sum_probs=40.9
Q ss_pred ceEEEEecCCCCEEEEecCC------------CeEEEEeCCCccceeeeee-cccceeEE-EcCCCCEEEEe
Q psy1859 70 PVNAISFHQEYNTFATGGSD------------GYVNIWDGFNKKRLCQFHR-YDTGITSL-FHQEYNTFATG 127 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d------------~~v~~wd~~~~~~~~~~~~-~~~~v~~~-~~~~~~~l~~~ 127 (162)
..-.|.|+|.|.+++....+ ..+.+.+..+++..+-+.. ....++.+ |+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35679999999987776432 3566667666665444443 35678888 99999988776
No 339
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.33 E-value=3.3 Score=27.32 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=36.9
Q ss_pred CCCEEEEecCCC-----eEEEEeCCCcccee--eeeecccceeEEEcCCCCEEEEecCC--------------CeEEEEe
Q psy1859 79 EYNTFATGGSDG-----YVNIWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSD--------------GYVNIWD 137 (162)
Q Consensus 79 ~~~~l~~~~~d~-----~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d--------------~~i~iwd 137 (162)
++++++.|+.++ .+.+||+.+.+... .+.........+ .-++++++.|+.+ ..+.+||
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd 274 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYN 274 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE-EECCEEEEECCccccCcCCccccccccCcEEEec
Confidence 567777777543 57889988754332 221111112222 1256777777653 2477899
Q ss_pred CCCceee
Q psy1859 138 GFNKKRL 144 (162)
Q Consensus 138 ~~~~~~~ 144 (162)
+.+.+-.
T Consensus 275 ~~~~~W~ 281 (315)
T 4asc_A 275 EEEKKWE 281 (315)
T ss_dssp TTTTEEE
T ss_pred CCCChhh
Confidence 9877543
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.23 E-value=3.4 Score=27.28 Aligned_cols=108 Identities=12% Similarity=0.066 Sum_probs=55.4
Q ss_pred eCCCeEEEEcC-----C--CcE--EEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCC----
Q psy1859 23 PNKQGYVLSSI-----E--GRA--AVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSD---- 89 (162)
Q Consensus 23 ~~~~~l~~~~~-----~--g~i--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d---- 89 (162)
.+++.++.|+. . ..+ .+|.+|..+...+....+...+. ....+.+ ++.+++.|+.+
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---------~~~~~~~--~~~lyv~GG~~~~~~ 112 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRC---------LFGLGEA--LNSIYVVGGREIKDG 112 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEE---------SCEEEEE--TTEEEEECCEESSTT
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchh---------ceeEEEE--CCEEEEEeCCcCCCC
Confidence 46777777763 1 122 26667876643433322222211 1112222 45677777632
Q ss_pred ----CeEEEEeCCCcccee--eeeecccceeEEEcCCCCEEEEecC-C-----CeEEEEeCCCce
Q psy1859 90 ----GYVNIWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGS-D-----GYVNIWDGFNKK 142 (162)
Q Consensus 90 ----~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~-d-----~~i~iwd~~~~~ 142 (162)
..+.+||..+.+... .+....... ++..-++++++.|+. + ..+.+||..+.+
T Consensus 113 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 113 ERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp CCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CcccceEEEECCCCCcEeECCCCCCcccce-eEEEECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 458889988754322 221111111 122235667777765 2 468899988764
No 341
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.21 E-value=4 Score=28.03 Aligned_cols=71 Identities=11% Similarity=-0.045 Sum_probs=47.5
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
...++..++....+..-+.-|.+++||+.++.++..-+.....+... -+.+..=++.....|.|.--.+..
T Consensus 261 FPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 261 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred ceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 56678888888889999999999999999999988766555555433 222222233333556555444443
No 342
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.94 E-value=4.2 Score=32.54 Aligned_cols=37 Identities=14% Similarity=0.145 Sum_probs=29.7
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeee
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQF 106 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 106 (162)
.+.+++..++..++++-+.|+.+++|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455666777789999999999999999998776543
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=88.90 E-value=3.9 Score=27.84 Aligned_cols=65 Identities=11% Similarity=0.154 Sum_probs=42.6
Q ss_pred CEEEEecCCCeEEEEeCCCccceeeeeecc-cceeEE---EcC-CCCEEEEe-cCCCeEEEEeCCCceeee
Q psy1859 81 NTFATGGSDGYVNIWDGFNKKRLCQFHRYD-TGITSL---FHQ-EYNTFATG-GSDGYVNIWDGFNKKRLC 145 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~~~---~~~-~~~~l~~~-~~d~~i~iwd~~~~~~~~ 145 (162)
.+++.++.||.|.-.|..+|+...++.... .++... -.+ ++..++.. ..||.|..++..+|....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 467888999999999999998887776431 222221 111 22333343 589999999988875433
No 344
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=88.77 E-value=1.1 Score=33.72 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=28.5
Q ss_pred eeEEEcCCCCEEEEecCCCeEEEEeCCCceeeeeecc
Q psy1859 113 ITSLFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHR 149 (162)
Q Consensus 113 v~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 149 (162)
|.++ ..+..++++-+.|..+|+|++++++++.+...
T Consensus 224 Is~~-~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCK-LFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEE-EETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEe-ccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4443 33477999999999999999999998777653
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.72 E-value=4.4 Score=26.76 Aligned_cols=66 Identities=20% Similarity=0.200 Sum_probs=36.8
Q ss_pred CCCEEEEecCC-----CeEEEEeCCCcccee--eeeecccceeEEEcCCCCEEEEecCC--------------CeEEEEe
Q psy1859 79 EYNTFATGGSD-----GYVNIWDGFNKKRLC--QFHRYDTGITSLFHQEYNTFATGGSD--------------GYVNIWD 137 (162)
Q Consensus 79 ~~~~l~~~~~d-----~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~~~~~d--------------~~i~iwd 137 (162)
++++++.|+.+ ..+.+||+.+.+... .+....... .+..-++++++.|+.+ ..+.+||
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd 284 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI-SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYE 284 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC-EEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEE
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce-EEEEECCEEEEECCeeccCCCCceeccceeeeEEEEe
Confidence 46777777643 357789988754322 222111111 2212256777777643 4588899
Q ss_pred CCCceeee
Q psy1859 138 GFNKKRLC 145 (162)
Q Consensus 138 ~~~~~~~~ 145 (162)
+.+.+-..
T Consensus 285 ~~~~~W~~ 292 (318)
T 2woz_A 285 DDKKEWAG 292 (318)
T ss_dssp TTTTEEEE
T ss_pred CCCCEehh
Confidence 98876433
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=86.91 E-value=5.1 Score=26.67 Aligned_cols=102 Identities=8% Similarity=-0.047 Sum_probs=54.9
Q ss_pred EEEeeCCCeEEEEc--CCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEec-CCCeEEEE
Q psy1859 19 IKCFPNKQGYVLSS--IEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGG-SDGYVNIW 95 (162)
Q Consensus 19 i~~~~~~~~l~~~~--~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~v~~w 95 (162)
..++++++.++... .++.-.|+..+......+.+.. + .+ .+++|+++.|.-.+ ....|..-
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~---~-----------~~--~~~~~~g~~iy~t~~g~~~Iy~~ 172 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKN---H-----------YL--FTCNTSDRYFYYNNPKNGQLYRY 172 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEES---S-----------CC--CCSEEETTEEEEECTTTCCEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeC---C-----------Cc--eEeeEECCEEEEEeCCCceEEEE
Confidence 36788888888765 3555566556654321222211 1 12 34567776665444 46778888
Q ss_pred eCCCccceeeeeecccceeEE-EcCCCCEEEEecCC--CeEEEEeCCC
Q psy1859 96 DGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSD--GYVNIWDGFN 140 (162)
Q Consensus 96 d~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d--~~i~iwd~~~ 140 (162)
++..+.....+. +.. .. ++|++++|+..... ..|..-++..
T Consensus 173 ~l~g~~~~~l~~---~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 173 DTASQSEALFYD---CNC-YKPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp ETTTTEEEEEEC---SCE-EEEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred ECCCCCEEEEeC---CCc-cceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 876544332222 112 23 55878777766533 3555556543
No 347
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.06 E-value=12 Score=30.15 Aligned_cols=69 Identities=13% Similarity=-0.059 Sum_probs=44.2
Q ss_pred ceEEEEecCC------CCEEEEecC-CCeEEEEeCCCccceeeeee-cccceeEE-Ec--CCCCEEEEecCCCeEEEEeC
Q psy1859 70 PVNAISFHQE------YNTFATGGS-DGYVNIWDGFNKKRLCQFHR-YDTGITSL-FH--QEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 70 ~v~~~~~~p~------~~~l~~~~~-d~~v~~wd~~~~~~~~~~~~-~~~~v~~~-~~--~~~~~l~~~~~d~~i~iwd~ 138 (162)
.|.|+++.|. ...++.|.. |+.++++++.+.+.+....- ......++ +. ....+|..|-.||.+.-+.+
T Consensus 555 evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 555 EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp CEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred ceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 6999999763 368888886 99999999986544432221 11233334 21 23357888888998755543
No 348
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=84.77 E-value=9.9 Score=28.12 Aligned_cols=59 Identities=10% Similarity=0.083 Sum_probs=40.8
Q ss_pred ceEEEEecCCCCEEEEecC------------CCeEEEEeCCCccceeeeee-cccceeEE-EcCCCCEEEEec
Q psy1859 70 PVNAISFHQEYNTFATGGS------------DGYVNIWDGFNKKRLCQFHR-YDTGITSL-FHQEYNTFATGG 128 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~------------d~~v~~wd~~~~~~~~~~~~-~~~~v~~~-~~~~~~~l~~~~ 128 (162)
....|.|.++|.+.+.... ...+..++..+++....+.. ....++.+ |+||++.|++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 5678999999988774322 22677777766765444432 23567888 999999888764
No 349
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=84.06 E-value=4.9 Score=29.73 Aligned_cols=60 Identities=15% Similarity=0.156 Sum_probs=35.6
Q ss_pred EEEEEeeCCCeEEEEcCC----------CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 17 RCIKCFPNKQGYVLSSIE----------GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~----------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
.-|+|+|.|++++.-..+ +.-.+|..+...+ +....+.++.. ..++.+.|+|+++.|...
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g--~~~rf~~~P~g--------aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG--EIRRFMVGPIG--------CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC--CEEEEEECCTT--------CEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCC--eEEEEEeCCCC--------ccCcCeeECCCCCEEEEE
Confidence 458899999866665332 2334555665542 22222233322 258999999999766554
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.47 E-value=3.5 Score=30.48 Aligned_cols=70 Identities=11% Similarity=0.002 Sum_probs=47.4
Q ss_pred ceEEEEecCCCCEEEEe-cCCCeEEEEeCCCccc-------------eeeeeecccceeEE-EcCCCCEEEEecCCCeEE
Q psy1859 70 PVNAISFHQEYNTFATG-GSDGYVNIWDGFNKKR-------------LCQFHRYDTGITSL-FHQEYNTFATGGSDGYVN 134 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~-~~d~~v~~wd~~~~~~-------------~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~ 134 (162)
....+..+|+|++++.+ -.+..+.++|+++-.. ..... -.-..... |.++|.-..+.--|.+|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 45689999999776655 5789999999985211 11222 23344555 999994444445899999
Q ss_pred EEeCCC
Q psy1859 135 IWDGFN 140 (162)
Q Consensus 135 iwd~~~ 140 (162)
-|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999864
No 351
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=80.83 E-value=13 Score=26.67 Aligned_cols=71 Identities=11% Similarity=-0.045 Sum_probs=48.4
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeCCC
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDGFN 140 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 140 (162)
...++..++....+..-+.-|.+.+||+.++.++..-+.....+... -+.+..=++.....|.|.--.+..
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred ceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 46688889988889999999999999999999987766555555444 333322333334666555444443
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.56 E-value=4.8 Score=30.51 Aligned_cols=36 Identities=11% Similarity=0.157 Sum_probs=28.1
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeee
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFH 107 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~ 107 (162)
.|.++.+ +...+++-+.|..+++|++++++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4555544 36799999999999999999998766554
No 353
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=74.81 E-value=18 Score=24.93 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=68.1
Q ss_pred EEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCC
Q psy1859 19 IKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGF 98 (162)
Q Consensus 19 i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~ 98 (162)
.-.+|..+.++.-. ...+.|++++.+. .. +.+...+ .|.-=.|-... .|+-.+ +..|+-|++.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~----kl---ks~~~~e-------~VvfWkWis~~-~L~lVT-~taVyHWs~~ 134 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKS----KM---KAHTMTD-------DVTFWKWISLN-TVALVT-DNAVYHWSME 134 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTE----EE---EEEECSS-------CEEEEEECSSS-EEEEEE-SSEEEEEESS
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhh----hh---cceecCC-------ccEEEEecCCC-eEEEEc-CCcEEEEccc
Confidence 44688877777654 6778885544432 22 2233221 56666775433 333332 5679999997
Q ss_pred C-ccceeeeeec----ccceeEE-EcCCCCEEEEecC-------CCeEEEEeCCCceeeeeeccCCC
Q psy1859 99 N-KKRLCQFHRY----DTGITSL-FHQEYNTFATGGS-------DGYVNIWDGFNKKRLCQFHRYDT 152 (162)
Q Consensus 99 ~-~~~~~~~~~~----~~~v~~~-~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~ 152 (162)
. ..+.+.+..| ...|... .+++.++++..+- .|.+.+|..+.+. .+.+++|..
T Consensus 135 ~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa 200 (365)
T 2xzh_A 135 GESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA 200 (365)
T ss_dssp TTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEE
T ss_pred CCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeee
Confidence 5 3455555544 2345555 7888888766542 3678899986543 444555543
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=74.14 E-value=17 Score=26.94 Aligned_cols=60 Identities=15% Similarity=0.109 Sum_probs=34.7
Q ss_pred EEEEEeeCCCeEEEEcCC----------CcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEe
Q psy1859 17 RCIKCFPNKQGYVLSSIE----------GRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATG 86 (162)
Q Consensus 17 ~~i~~~~~~~~l~~~~~~----------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 86 (162)
..|.+.++|.+.+..... +.-.+|.+++.++..... +.+... ..++.++|+|+++.|.+.
T Consensus 479 DnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~f--l~~P~~--------aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRF--MVGPIG--------CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEE--EECCTT--------CEEEEEEECTTSSEEEEE
T ss_pred CceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEE--EeCCCC--------ccccCCEECCCCCEEEEE
Confidence 568899988877643221 222566677654222222 222211 148999999999766654
No 355
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=73.97 E-value=22 Score=25.59 Aligned_cols=116 Identities=14% Similarity=0.091 Sum_probs=67.7
Q ss_pred EEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCC
Q psy1859 19 IKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGF 98 (162)
Q Consensus 19 i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~ 98 (162)
.-.+|..+.++.-. ...+.|++++.+. .. +.+...+ .|.-=.|-... .|+-. .+..|+-|++.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~----kl---ks~~~~e-------~VvfWkWis~~-~l~lV-T~taVyHWsi~ 133 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKS----KM---KAHTMTD-------DVTFWKWISLN-TVALV-TDNAVYHWSME 133 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTE----EE---EEEECSS-------CCCEEEEEETT-EEEEE-CSSEEEEEESS
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhh----hh---cceecCC-------CceEEEecCCC-eEEEE-cCCeeEEeccc
Confidence 44778777777654 6778885554432 22 2233211 46666664333 33333 35689999997
Q ss_pred C-ccceeeeeec----ccceeEE-EcCCCCEEEEecC-------CCeEEEEeCCCceeeeeeccCCC
Q psy1859 99 N-KKRLCQFHRY----DTGITSL-FHQEYNTFATGGS-------DGYVNIWDGFNKKRLCQFHRYDT 152 (162)
Q Consensus 99 ~-~~~~~~~~~~----~~~v~~~-~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~ 152 (162)
. ..+.+.+..| ...|... .+++.++++..+- .|.+.+|..+.+ ..+.+++|..
T Consensus 134 ~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa 199 (494)
T 1bpo_A 134 GESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 199 (494)
T ss_dssp SSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEE
T ss_pred CCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeee
Confidence 5 3455555544 2345555 7888888776542 367889998654 3444556644
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=68.17 E-value=18 Score=25.83 Aligned_cols=52 Identities=17% Similarity=0.217 Sum_probs=31.8
Q ss_pred cceeEE-EcCCCC-EEEEecCCCeEEEEeCCCce---eeeeec---c------CCCceeEEEecCC
Q psy1859 111 TGITSL-FHQEYN-TFATGGSDGYVNIWDGFNKK---RLCQFH---R------YDTGITSLCFSYD 162 (162)
Q Consensus 111 ~~v~~~-~~~~~~-~l~~~~~d~~i~iwd~~~~~---~~~~~~---~------~~~~v~~v~~~pd 162 (162)
.....+ |.|+|. .++++...|.|++++..... .+..+. . .......|+|+||
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 345567 899985 45555678999999753221 111111 0 1356788999885
No 357
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=64.63 E-value=39 Score=28.46 Aligned_cols=106 Identities=14% Similarity=0.094 Sum_probs=59.1
Q ss_pred EEEeeCCCeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCC
Q psy1859 19 IKCFPNKQGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGF 98 (162)
Q Consensus 19 i~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~ 98 (162)
.-.+|..+.++.-. ..++.|++++.+. ... .+... .+|.-=.|-... .|+-. .+..|+-|++.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~----klk---s~~~~-------e~VvfWkWis~~-~l~lV-T~~aVyHW~~~ 133 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKS----KMK---AHTMT-------DDVTFWKWISLN-TVALV-TDNAVYHWSME 133 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhh----hhc---ccccC-------CCceEEEecCCC-eeEEE-cCCeEEEeccC
Confidence 33667666666543 5677785444432 222 22221 146655664333 33322 25679999997
Q ss_pred C-ccceeeeeec----ccceeEE-EcCCCCEEEEec-------CCCeEEEEeCCCc
Q psy1859 99 N-KKRLCQFHRY----DTGITSL-FHQEYNTFATGG-------SDGYVNIWDGFNK 141 (162)
Q Consensus 99 ~-~~~~~~~~~~----~~~v~~~-~~~~~~~l~~~~-------~d~~i~iwd~~~~ 141 (162)
. ..+.+.+..| ...|... -+++.++++..+ -.|.+.+|.+..+
T Consensus 134 ~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 134 GESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred CCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc
Confidence 4 3444444433 3445555 778888877554 2478889988644
No 358
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=59.02 E-value=44 Score=28.21 Aligned_cols=69 Identities=10% Similarity=-0.070 Sum_probs=43.0
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEEeCCCccceeeeeecccceeEE--EcCCCCEEEEecCCCeEEEEeCC
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIWDGFNKKRLCQFHRYDTGITSL--FHQEYNTFATGGSDGYVNIWDGF 139 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~--~~~~~~~l~~~~~d~~i~iwd~~ 139 (162)
...++..++....+...+.-|.+.++|+.++.++..-+.....+... ..+.+.. +.....|.|.--.+.
T Consensus 260 fpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~-~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGI-IGVNRKGQVLSVCVE 330 (1630)
T ss_pred cceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCce-EEEcCCceEEEEEEc
Confidence 34467777777788888899999999999998877655444444433 2223332 223355555444443
No 359
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=52.56 E-value=63 Score=23.37 Aligned_cols=25 Identities=12% Similarity=0.371 Sum_probs=21.7
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEE
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNI 94 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~ 94 (162)
+|..|.++++...|..++.++.+++
T Consensus 463 pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 463 TISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred ccceEEEcCCCCEEEEEECCeEEEE
Confidence 7899999999999999988887765
No 360
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=50.00 E-value=73 Score=23.35 Aligned_cols=73 Identities=7% Similarity=0.029 Sum_probs=40.5
Q ss_pred cEEEEEEeeCC--CeEEEEcCCCcEEEEEecCCcccceeeeeeeeeeeccCcccceeceE-EEEecCCCCEEEEecCCCe
Q psy1859 15 QTRCIKCFPNK--QGYVLSSIEGRAAVEYLDTGPEMQKMKYAFKCHRIKEDGIEKIYPVN-AISFHQEYNTFATGGSDGY 91 (162)
Q Consensus 15 ~~~~i~~~~~~--~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~l~~~~~d~~ 91 (162)
..++|+....+ ..+..|+.+|.|.-..++...........+.... ...+|. .|.+++++..|.+++.++.
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~-------~~~pv~~~l~~~~~~~~Lyv~s~~~V 473 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-------DGSPILRDMAFSINQLYLYVMSERQV 473 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCT-------TCCCCCSCCEECTTSSEEEEECSSEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeec-------CCCccccceEEccCCCeEEEEecccc
Confidence 35666665543 3467788899876433432210001111111111 112574 8899998888888887776
Q ss_pred EEE
Q psy1859 92 VNI 94 (162)
Q Consensus 92 v~~ 94 (162)
+++
T Consensus 474 ~kv 476 (539)
T 3al9_A 474 TRV 476 (539)
T ss_dssp EEE
T ss_pred cee
Confidence 665
No 361
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=49.22 E-value=25 Score=17.68 Aligned_cols=30 Identities=10% Similarity=0.150 Sum_probs=20.4
Q ss_pred CCCeEEEEcCCCcEEEEEecCCcccceeeee
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEMQKMKYA 54 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~ 54 (162)
..+.|+.-. +|.|+||.||..++..+.+..
T Consensus 28 e~nhFgv~e-~g~iKIykyde~tNeI~LkKE 57 (72)
T 3kvp_A 28 EHNHFGVME-DGYIKIYEYNESRNEVKLKKE 57 (72)
T ss_dssp STTEEEEEE-TTEEEEEEEETTTTEEEEEEE
T ss_pred cCCEEEEEe-CCEEEEEEeCCCCCeEEEEEe
Confidence 345566655 899999999998754444433
No 362
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=44.74 E-value=87 Score=22.69 Aligned_cols=55 Identities=15% Similarity=0.183 Sum_probs=35.5
Q ss_pred CEEEEecCCCeEEEEeCC-Ccc-------ceeeeee--cccceeEE-EcCCCCEEEEecCCCeEEE
Q psy1859 81 NTFATGGSDGYVNIWDGF-NKK-------RLCQFHR--YDTGITSL-FHQEYNTFATGGSDGYVNI 135 (162)
Q Consensus 81 ~~l~~~~~d~~v~~wd~~-~~~-------~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~i~i 135 (162)
..+..|+.+|.|.-.-+. .+. .+..+.. ...+|..+ ++++..+|.+++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 356678888887643332 211 2223332 35688889 9999999999988876665
No 363
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=42.80 E-value=1.1e+02 Score=23.21 Aligned_cols=25 Identities=20% Similarity=0.373 Sum_probs=20.5
Q ss_pred ceEEEEecCCC--CEEEEecCCCeEEE
Q psy1859 70 PVNAISFHQEY--NTFATGGSDGYVNI 94 (162)
Q Consensus 70 ~v~~~~~~p~~--~~l~~~~~d~~v~~ 94 (162)
+|..|.++++. ..|.+++.++.+++
T Consensus 451 pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 451 PVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred cceeeEeccCCCccEEEEEEcCeEEEE
Confidence 68899999987 88888888777665
No 364
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=40.86 E-value=69 Score=23.48 Aligned_cols=65 Identities=6% Similarity=-0.026 Sum_probs=39.6
Q ss_pred eEEEEecCCC--CEEEEecCCCeEEEEeCCCc----cceeeeee--ccccee-EE-EcCCCCEEEEecCCCeEEE
Q psy1859 71 VNAISFHQEY--NTFATGGSDGYVNIWDGFNK----KRLCQFHR--YDTGIT-SL-FHQEYNTFATGGSDGYVNI 135 (162)
Q Consensus 71 v~~~~~~p~~--~~l~~~~~d~~v~~wd~~~~----~~~~~~~~--~~~~v~-~~-~~~~~~~l~~~~~d~~i~i 135 (162)
+++|+....+ ..+..|+.+|.|.-..+... ..+..+.. ...+|. .+ +++++.+|++++..+.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4455554433 45667888998875544322 12223221 245674 77 9999999999988766655
No 365
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=37.86 E-value=1.3e+02 Score=22.82 Aligned_cols=26 Identities=12% Similarity=0.293 Sum_probs=22.5
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+|..|.+++++..|.+++.++.+++-
T Consensus 471 pI~~L~ld~~~~~LYV~t~~~V~kVP 496 (667)
T 4gz8_A 471 TISAMELSTKQQQLYIGSTAGVAQLP 496 (667)
T ss_dssp CCCEEEEETTTTEEEEEBSSCEEEEE
T ss_pred eeeeEEEcCCCCEEEEEECCEEEEEE
Confidence 78999999999999999888877764
No 366
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=35.62 E-value=69 Score=19.80 Aligned_cols=32 Identities=9% Similarity=0.119 Sum_probs=23.9
Q ss_pred ceEEEEecCCC-CEEEEecCCCeEEEEeCCCcc
Q psy1859 70 PVNAISFHQEY-NTFATGGSDGYVNIWDGFNKK 101 (162)
Q Consensus 70 ~v~~~~~~p~~-~~l~~~~~d~~v~~wd~~~~~ 101 (162)
.+.++.|...+ ..+++...++.+.++|.+-|+
T Consensus 120 hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 120 HLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp EEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred eEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 46667776654 566667788999999998765
No 367
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=34.80 E-value=1.5e+02 Score=22.54 Aligned_cols=54 Identities=17% Similarity=0.220 Sum_probs=34.3
Q ss_pred EEEEecCCCeEE-EEeCCCcc-------ceeeee--ecccceeEE-EcCCCCEEEEecCCCeEEE
Q psy1859 82 TFATGGSDGYVN-IWDGFNKK-------RLCQFH--RYDTGITSL-FHQEYNTFATGGSDGYVNI 135 (162)
Q Consensus 82 ~l~~~~~d~~v~-~wd~~~~~-------~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~i~i 135 (162)
.+..|+.+|.|. +....... .+..+. ....+|..+ ++++.++|++++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 566788888875 32222111 122222 235678889 9999999999988876665
No 368
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=34.75 E-value=1.4e+02 Score=22.27 Aligned_cols=26 Identities=8% Similarity=0.070 Sum_probs=21.3
Q ss_pred ceEEEEecCCCCEEEEecCCCeEEEE
Q psy1859 70 PVNAISFHQEYNTFATGGSDGYVNIW 95 (162)
Q Consensus 70 ~v~~~~~~p~~~~l~~~~~d~~v~~w 95 (162)
+|..+.++++...|..++.++.+++-
T Consensus 420 pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 420 AIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp CCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred ceeeEEEcCCCCEEEEEecceEEEcc
Confidence 78999999988888888877776664
No 369
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=28.68 E-value=1.6e+02 Score=22.42 Aligned_cols=71 Identities=8% Similarity=0.111 Sum_probs=38.4
Q ss_pred EEEEEeeCC--CeEEEEcCCCcEEEEEecCCcccceeee-eeeeeeeccCcccceece-EEEEecCCCCEEEEecCCCeE
Q psy1859 17 RCIKCFPNK--QGYVLSSIEGRAAVEYLDTGPEMQKMKY-AFKCHRIKEDGIEKIYPV-NAISFHQEYNTFATGGSDGYV 92 (162)
Q Consensus 17 ~~i~~~~~~--~~l~~~~~~g~i~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v-~~~~~~p~~~~l~~~~~d~~v 92 (162)
++|+....+ ..+..|+.+|.|.-....... .....+ .+.... ...+| ..+.++++...|..++.++.+
T Consensus 402 T~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~-~~~~~~ee~~v~~-------~~~pI~~~l~l~~~~~~Lyv~s~~~V~ 473 (681)
T 3oky_A 402 TSVASYVYNGYSVVFVGTKSGKLKKIRADGPP-HGGVQYEMVSVFK-------DGSPILRDMAFSINQLYLYVMSERQVT 473 (681)
T ss_dssp CCCEEEEETTEEEEEEEBTTSEEEEEECCCTT-TCCEEEEEEECCT-------TCCCCCSCCEECTTSSEEEEECSSEEE
T ss_pred EEEEEEecCceEEEEEECCCceEEEEEECCCC-CceEEEEEeeecc-------CCCceeeeeEEcCCCCEEEEEecCEEE
Confidence 445554433 346778889987643233211 001111 111110 11255 688999988888888877776
Q ss_pred EEE
Q psy1859 93 NIW 95 (162)
Q Consensus 93 ~~w 95 (162)
++-
T Consensus 474 qvP 476 (681)
T 3oky_A 474 RVP 476 (681)
T ss_dssp EEE
T ss_pred EEE
Confidence 663
No 370
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=28.62 E-value=18 Score=25.69 Aligned_cols=19 Identities=42% Similarity=0.744 Sum_probs=12.6
Q ss_pred EecCCCeEEEEeCCCccce
Q psy1859 85 TGGSDGYVNIWDGFNKKRL 103 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~~~~~ 103 (162)
.+..+|.|++||+++...+
T Consensus 162 ~~~~~GVVrvWDVkd~slL 180 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELL 180 (577)
T ss_dssp ----CCEECSEECSCGGGG
T ss_pred CCCCCCeEEEEecCCHHHH
Confidence 5677999999999986543
No 371
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=28.51 E-value=1.1e+02 Score=19.22 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=28.5
Q ss_pred EecCCCeEEEEeCCCccceeeeeecccceeEEEcCCCCEEEE-ecCCCeEEEEeCCCceeeee
Q psy1859 85 TGGSDGYVNIWDGFNKKRLCQFHRYDTGITSLFHQEYNTFAT-GGSDGYVNIWDGFNKKRLCQ 146 (162)
Q Consensus 85 ~~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~ 146 (162)
.+-....+.+|.+..+..+..+....+.- |-....+-+. ...+|.+++-+.+++.|+..
T Consensus 64 m~~ng~~lt~Wa~~~~nw~wgY~~~ds~~---FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~a 123 (206)
T 1sr4_A 64 MGQNGALLTVWALAKRNWLWAYPNIYSQD---FGNIRNWKMEPGKHREYFRFVNQSLGTCVEA 123 (206)
T ss_dssp EETTSEEEEECSCSTTCBEEEEEGGGCGG---GGGGGCEEEEECSSTTCEEEEETTTCCEEEE
T ss_pred EcCCCCEEEEEecCCCcceeeecccccCC---cCCcceeEEEeecCCCEEEEEECCCCceeee
Confidence 33344556788887766554443221100 1111222233 34556666666666655544
No 372
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=27.09 E-value=2e+02 Score=21.54 Aligned_cols=55 Identities=7% Similarity=0.060 Sum_probs=34.1
Q ss_pred EEEEecCCCeEEEEeCCC-cc---c--eeeee--ecccceeEE-EcCCCCEEEEecCCCeEEEE
Q psy1859 82 TFATGGSDGYVNIWDGFN-KK---R--LCQFH--RYDTGITSL-FHQEYNTFATGGSDGYVNIW 136 (162)
Q Consensus 82 ~l~~~~~d~~v~~wd~~~-~~---~--~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~i~iw 136 (162)
.+..|+.+|.|.-.-+.. +. . +..+. ....++..+ ++++...|++++.++.++|-
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 556788888876433322 21 1 11222 234678888 99998999998877666653
No 373
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=22.41 E-value=1.8e+02 Score=19.56 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCcEEEEEecCCccc---ceeeeeeeeeeeccCcccceeceEEEEecCCCCEEEEecCCCeEEEEeCC--
Q psy1859 24 NKQGYVLSSIEGRAAVEYLDTGPEM---QKMKYAFKCHRIKEDGIEKIYPVNAISFHQEYNTFATGGSDGYVNIWDGF-- 98 (162)
Q Consensus 24 ~~~~l~~~~~~g~i~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~v~~wd~~-- 98 (162)
+..++++++..|.++--..+.-... ......++.. +.+..+........++..+..|.+..+...
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~----------D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~ 177 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN----------DELVGAVLCSAGDDLLLVSANGQSIRFSATDE 177 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT----------CCEEEEEEECTTCEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC----------CEEEEEEEecCCCEEEEEECCCeEEEEECccc
Confidence 4678999999999887443321100 1111112111 134444444445677778888988887766
Q ss_pred Ccc---------ceeeeeecccceeEE-EcCCCCEEEEecCCCeEEEEeC
Q psy1859 99 NKK---------RLCQFHRYDTGITSL-FHQEYNTFATGGSDGYVNIWDG 138 (162)
Q Consensus 99 ~~~---------~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~i~iwd~ 138 (162)
.-. ....+. ....+..+ .-+++.+++..+..|.++.-.+
T Consensus 178 eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 178 ALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp TSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred ccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 211 111222 23445566 4445668888888998887764
Done!