BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1860
(659 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BU30|SYIC_MOUSE Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Iars PE=2
SV=2
Length = 1262
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/667 (60%), Positives = 494/667 (74%), Gaps = 20/667 (2%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHV--TSAFRVLTDTYVTEESGT 59
++RL L+K+E +YEIL+ F G++LKG +Y+PLF YF AF VL D YV +E GT
Sbjct: 260 EARLSALYKQESDYEILERFPGASLKGKKYKPLFDYFIKCKENGAFTVLVDHYVKDEEGT 319
Query: 60 GVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIK 119
GVVHQAPYFG DD+RVC+ +I +D VCPVDASGCFT V+HF+G YVKDADK II+
Sbjct: 320 GVVHQAPYFGADDHRVCMDFNIIQKDSVPVCPVDASGCFTEEVTHFVGQYVKDADKNIIR 379
Query: 120 HLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEF 179
LKEQ RL++AG+ HSYPFCWRSDTPLIYK+VPSWF+RV+ M LLK N YWVPEF
Sbjct: 380 MLKEQGRLLAAGTFTHSYPFCWRSDTPLIYKSVPSWFVRVEPMVDQLLKNNDLCYWVPEF 439
Query: 180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL 239
V+EKRFGNWL+EARDWAISRNRYWGTPIPLWVS+D EE+VC+GS+AEL LSG + DL
Sbjct: 440 VREKRFGNWLKEARDWAISRNRYWGTPIPLWVSEDLEEVVCIGSVAELEELSGTKI-SDL 498
Query: 240 HRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFI 299
HRES+D +TIPS R GK PLRRV EVFDCWFESGSMPYAQ+H+PF+++R+F+D FPADFI
Sbjct: 499 HRESIDHLTIPS-RCGKAPLRRVSEVFDCWFESGSMPYAQVHYPFESKREFEDAFPADFI 557
Query: 300 AEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFK 359
AEGIDQTRGWFYTLLV++TALF Q PF+N+I NGL+LA DGQKMSK K+NYPDP+
Sbjct: 558 AEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQKMSKRKKNYPDPVS-IID 616
Query: 360 NLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHV-WEPVHVWSVCLILKEKVLLAN 418
A+ L L + +++ VR L V + W + + + + +
Sbjct: 617 KYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVFRLH----- 671
Query: 419 DAEEKLSFQYNE--AEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNL 476
EE++ F YNE S NI D W++SF +SL+ F EMAAYRLYTVVPRLV F+D L
Sbjct: 672 -KEEEVKFLYNEHTVRESPNITDRWVLSFMQSLLGFFETEMAAYRLYTVVPRLVKFVDIL 730
Query: 477 TNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLR----- 531
TNWYVRMNRRRLKGE G DC +AL +L VL ++ R+MAPYTPFL E +YQNL+
Sbjct: 731 TNWYVRMNRRRLKGESGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKLLIDP 790
Query: 532 -HLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREA 590
L + SIH++M+P+ +ID++ E +V RMQSV+ELGRVIR+R TIPIKYPL+E
Sbjct: 791 ASLRDKDTLSIHYLMLPRVREELIDKKTENAVSRMQSVIELGRVIRDRKTIPIKYPLKEI 850
Query: 591 VVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFK 650
VVIH D + L++IR+LE YI++ELNVR VT STDK KYG+ LRAEPDH LG RLK AFK
Sbjct: 851 VVIHQDPEALEDIRSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMVLGKRLKGAFK 910
Query: 651 PITQAIK 657
+ AIK
Sbjct: 911 AVMMAIK 917
>sp|P41252|SYIC_HUMAN Isoleucine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=IARS PE=1
SV=2
Length = 1262
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/668 (59%), Positives = 489/668 (73%), Gaps = 20/668 (2%)
Query: 1 MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHV--TSAFRVLTDTYVTEESG 58
M++RL L+K E +YEIL+ F G+ LKG +Y+PLF YF AF VL D YV EE G
Sbjct: 259 MEARLSALYKLESDYEILERFPGAYLKGKKYRPLFDYFLKCKENGAFTVLVDNYVKEEEG 318
Query: 59 TGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPII 118
TGVVHQAPYFG +DYRVC+ +I +D VCPVDASGCFT V+ F G YVKDADK II
Sbjct: 319 TGVVHQAPYFGAEDYRVCMDFNIIRKDSLPVCPVDASGCFTTEVTDFAGQYVKDADKSII 378
Query: 119 KHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPE 178
+ LKEQ RL+ A + HSYPFCWRSDTPLIYKAVPSWF+RV++M LL+ N YWVPE
Sbjct: 379 RTLKEQGRLLVATTFTHSYPFCWRSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPE 438
Query: 179 FVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKD 238
V+EKRFGNWL++ARDW ISRNRYWGTPIPLWVSDD EE+VC+GS+AEL LSG + D
Sbjct: 439 LVREKRFGNWLKDARDWTISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKI-SD 497
Query: 239 LHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADF 298
LHRESVD +TIPS R GK L R+ EVFDCWFESGSMPYAQ+H+PF+N+R+F+D FPADF
Sbjct: 498 LHRESVDHLTIPS-RCGKGSLHRISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADF 556
Query: 299 IAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPF 358
IAEGIDQTRGWFYTLLV++TALF Q PF+N+I NGLVLA DGQKMSK K+NYPDP+
Sbjct: 557 IAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVS-II 615
Query: 359 KNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHV-WEPVHVWSVCLILKEKVLLA 417
+ A+ L L + +++ VR L V + W + + + +L+ +
Sbjct: 616 QKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQ---- 671
Query: 418 NDAEEKLSFQYNE--AEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDN 475
EE++ F YNE S NI D WI+SF +SLI F EMAAYRLYTVVPRLV F+D
Sbjct: 672 --KEEEIEFLYNENTVRESPNITDRWILSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDI 729
Query: 476 LTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTG 535
LTNWYVRMNRRRLKGE G DC +AL +L VL ++ R+MAPYTPFL E +YQNL+ L
Sbjct: 730 LTNWYVRMNRRRLKGENGMEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKVLID 789
Query: 536 RLE------RSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLRE 589
+ SIH++M+P+ +ID++ E +V +MQSV+ELGRVIR+R TIPIKYPL+E
Sbjct: 790 PVSVQDKDTLSIHYLMLPRVREELIDKKTESAVSQMQSVIELGRVIRDRKTIPIKYPLKE 849
Query: 590 AVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAF 649
VVIH D + L++I++LE YI++ELNVR VT STDK KYG+ LRAEPDH LG RLK AF
Sbjct: 850 IVVIHQDPEALKDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMVLGKRLKGAF 909
Query: 650 KPITQAIK 657
K + +IK
Sbjct: 910 KAVMTSIK 917
>sp|Q21926|SYIC_CAEEL Isoleucine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=irs-1 PE=3 SV=1
Length = 1141
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/661 (56%), Positives = 480/661 (72%), Gaps = 15/661 (2%)
Query: 1 MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVT---SAFRVLTDTYVTEES 57
++ RL L K + E+++ GS LK L+Y+PLFPYF ++ +AFRVL DT+VT +S
Sbjct: 261 LEERLGEL--KNDNLEVIEKLAGSQLKDLRYEPLFPYFAYMREERNAFRVLNDTFVTSDS 318
Query: 58 GTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPI 117
GTGVVHQAPYFGE D++VC+A GVI +DQ+++CPVD SG +T+ V + G+YVKDADK I
Sbjct: 319 GTGVVHQAPYFGEIDFQVCVANGVIAKDQKMICPVDESGKYTSEVPDYQGVYVKDADKLI 378
Query: 118 IKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVP 177
IK LKE LV VKHSYPFCWRSDTPL+YKAVPSWFI V+ + LL N +TYWVP
Sbjct: 379 IKRLKEMGNLVRQAEVKHSYPFCWRSDTPLLYKAVPSWFINVETLIPRLLANNDETYWVP 438
Query: 178 EFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEK 237
FVKEKRF NWLR+ARDWA+SRNR+WGTPI LWVS+DGEE+VCVGSIAEL LSG +
Sbjct: 439 AFVKEKRFANWLRDARDWAVSRNRFWGTPINLWVSEDGEEVVCVGSIAELEELSGQKI-T 497
Query: 238 DLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPAD 297
DLHRESVD VTIPS R G+ L+RV EVFDCWFESGSMPYAQ H+PF+NR+ F+D FPAD
Sbjct: 498 DLHRESVDDVTIPS-RSGRGVLKRVSEVFDCWFESGSMPYAQNHYPFENRKIFEDNFPAD 556
Query: 298 FIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPP 357
FIAEGIDQTRGWFYTLLV+STALF + PF+NLI NGLVLA DG KMSKSK+NYPDPM
Sbjct: 557 FIAEGIDQTRGWFYTLLVLSTALFNKPPFKNLICNGLVLASDGAKMSKSKKNYPDPMLIV 616
Query: 358 FKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHV-WEPVHVWSVCLILKEKVLL 416
K A+ L L + + + VR L V + W + + V + +
Sbjct: 617 NK-YGADALRLYLINSPVVRGENLRFREEGVRDLLKDVFLPWFNAYRFFV------QNVQ 669
Query: 417 ANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNL 476
A + E F N S N+MD WI SF+ SL+ FVRKEM +YRLY VV L F D L
Sbjct: 670 AYEHETGNVFDMNVHVASENVMDRWIESFTNSLVAFVRKEMDSYRLYAVVGPLTKFFDTL 729
Query: 477 TNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGR 536
TN Y+R+NR+R+KG+ G + AL +L +VL +VR+MAP+TPF CE+++ NL+ + G
Sbjct: 730 TNIYIRLNRKRVKGDNGLHEQHHALAALGRVLILIVRLMAPFTPFFCEYIWLNLKKVIGS 789
Query: 537 LERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHND 596
E S+HF+M+P+P+ +ID+ +ER V+ M++V++L R++R+R + +KYPL+E +VI+ D
Sbjct: 790 TEESVHFLMLPKPDESLIDETVERRVEVMRNVIDLVRLVRDREGLAVKYPLKEMIVINRD 849
Query: 597 AQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAI 656
+Q L+++++LESYIL ELNVR +T S DKQKYG++L+AEP+ K LGARLK K + +
Sbjct: 850 SQFLEDVKSLESYILLELNVRKLTVSQDKQKYGITLKAEPNFKILGARLKGEQKKVADYL 909
Query: 657 K 657
K
Sbjct: 910 K 910
>sp|Q54YD4|SYIC_DICDI Probable isoleucine--tRNA ligase, cytoplasmic OS=Dictyostelium
discoideum GN=ileS PE=3 SV=1
Length = 1067
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/667 (51%), Positives = 469/667 (70%), Gaps = 22/667 (3%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTS--AFRVLTDTYVTEESGT 59
++R L+K ++EY +L++ +G+ L G +Y P+FPYF + F V+ +VT++SGT
Sbjct: 259 KNRTSILYKSDKEYTVLETMKGTDLIGKKYVPMFPYFASDANMGGFVVIGGDFVTDDSGT 318
Query: 60 GVVHQAPYFGEDDYRVCLAGGVITRDQ---EIVCPVDASGCFTAPVSHFLGLYVKDAD-- 114
G+VH AP +GEDD+ VC+A GVI+RDQ I+ VDA+GCFT+ V+ F G+ VKDA+
Sbjct: 319 GIVHTAPAYGEDDFNVCIANGVISRDQFKRPILNSVDANGCFTSDVTDFAGMMVKDAETT 378
Query: 115 KPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTY 174
K I +LK + R+V++ ++ HSYP+CWRSDTPLIYKAV SWF+RV+ + LL N TY
Sbjct: 379 KQISIYLKNKGRMVNSANLVHSYPYCWRSDTPLIYKAVGSWFVRVESIRDKLLANNDKTY 438
Query: 175 WVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGIS 234
WVP+FVKEKRF NWL+ A DWA+SRNRYWGTPIPLW+S+DGEE+V +GSI EL RLSG+
Sbjct: 439 WVPDFVKEKRFANWLKNATDWAVSRNRYWGTPIPLWISEDGEEVVVIGSIDELERLSGVR 498
Query: 235 VEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRF 294
V DLHRES+D +TIPS + GK LRR+ +VFDCWFESGSMPYAQ H+PF+N+ F+ F
Sbjct: 499 V-TDLHRESIDHITIPS-QKGKGTLRRIEDVFDCWFESGSMPYAQQHYPFENKDKFEKIF 556
Query: 295 PADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPM 354
PA FIAEG+DQTRGWFYTLLV+STALF + PF+NLI NGLVLA DG+KMSK +NYPDPM
Sbjct: 557 PAHFIAEGLDQTRGWFYTLLVLSTALFDKPPFQNLIVNGLVLAADGKKMSKRLKNYPDPM 616
Query: 355 EPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHV-WEPVHVWSV--CLILK 411
E K + A+ L L + +++ V+ + V + W + + V CL +
Sbjct: 617 EVVSK-VGADSLRLYLINSPVVRAETLKFQEKGVQDMIKDVFLPWFNAYRFFVQNCLRFE 675
Query: 412 EKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVL 471
+ + K++ S N+MD WI++ +SLI FVR EMAAYRLYTVVP+LV
Sbjct: 676 KATNTTFQPDIKVAL------ASENVMDKWILASCQSLIAFVRAEMAAYRLYTVVPKLVR 729
Query: 472 FIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLR 531
FI++LTNW+VR+NR+RLKG G ADC ALN L +VL T+ M P+TPF E++YQNL+
Sbjct: 730 FIEDLTNWFVRLNRKRLKGSNGDADCLAALNILYEVLMTICIAMGPFTPFFTEYMYQNLK 789
Query: 532 HLTGRLER--SIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLRE 589
+ ++ S+H++M P+P + + IE ++ RMQ V+ELGR R+R T PIK+PL+E
Sbjct: 790 KALPKEKQMDSVHYVMFPEPIQEAFNTRIEEAISRMQVVIELGRAARDRRTKPIKFPLKE 849
Query: 590 AVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAF 649
+VI + Q L ++ +L+SYIL+ELN++ + ++D+ + V + AE D+K LGARLK F
Sbjct: 850 FMVITENQQYLADLESLKSYILEELNIQNIVLTSDEGSF-VVVTAEADNKRLGARLKNDF 908
Query: 650 KPITQAI 656
K I+ I
Sbjct: 909 KKISPLI 915
>sp|P09436|SYIC_YEAST Isoleucine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ILS1 PE=1 SV=1
Length = 1072
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/662 (49%), Positives = 442/662 (66%), Gaps = 35/662 (5%)
Query: 1 MQSRLETLFKK--EEEYEILDSFQGSTLKGLQYQPLFPYFKHV--TSAFRVLTDTYVTEE 56
++S ++TL+KK E+Y+I++ +GS L GL+Y+PLFPYF +AFRV++D YVT +
Sbjct: 258 LESLIKTLYKKPKNEKYKIVEKIKGSDLVGLKYEPLFPYFAEQFHETAFRVISDDYVTSD 317
Query: 57 SGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKP 116
SGTG+VH AP FGE+D CL GVI+ D + +D G FT V F G+YVKDADK
Sbjct: 318 SGTGIVHNAPAFGEEDNAACLKNGVISEDSVLPNAIDDLGRFTKDVPDFEGVYVKDADKL 377
Query: 117 IIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWV 176
IIK+L L+ A ++HSYPFCWRSDTPL+Y++VP+WF+RV+++ +L ++WV
Sbjct: 378 IIKYLTNTGNLLLASQIRHSYPFCWRSDTPLLYRSVPAWFVRVKNIVPQMLDSVMKSHWV 437
Query: 177 PEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVE 236
P +KEKRF NW+ ARDW +SRNRYWGTPIPLWVSDD EE+VCVGSI EL L+G+
Sbjct: 438 PNTIKEKRFANWIANARDWNVSRNRYWGTPIPLWVSDDFEEVVCVGSIKELEELTGVRNI 497
Query: 237 KDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPA 296
DLHR+ +D +TIPS + GK L+R+ EVFDCWFESGSMPYA H+PF+N FD+R PA
Sbjct: 498 TDLHRDVIDKLTIPS-KQGKGDLKRIEEVFDCWFESGSMPYASQHYPFENTEKFDERVPA 556
Query: 297 DFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPM-- 354
+FI+EG+DQTRGWFYTL V+ T LF P++N+I +G+VLA DG+KMSKS +NYPDP
Sbjct: 557 NFISEGLDQTRGWFYTLAVLGTHLFGSVPYKNVIVSGIVLAADGRKMSKSLKNYPDPSIV 616
Query: 355 -----EPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGR-LCPVHVWEPVHVWSVCL 408
+ + N VL ++ K + EV + L P W W+
Sbjct: 617 LNKYGADALRLYLINSPVLKAESLKFKEEGVK-----EVVSKVLLP---W-----WNSFK 663
Query: 409 ILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPR 468
L ++ L + FQY+++ S N+MD WI++ +SL++F+ +EM Y+LYTVVP+
Sbjct: 664 FLDGQIALLKKM-SNIDFQYDDSVKSDNVMDRWILASMQSLVQFIHEEMGQYKLYTVVPK 722
Query: 469 LVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQ 528
L+ FID LTNWY+R NRRRLKGE G DC ALNSL LFT VR MAP+TPFL E +Y
Sbjct: 723 LLNFIDELTNWYIRFNRRRLKGENGVEDCLKALNSLFDALFTFVRAMAPFTPFLSESIYL 782
Query: 529 NLRHLT--------GRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVT 580
L+ G+ RS+HF+ P + D+ IE +V RMQSV++LGR IRE+ T
Sbjct: 783 RLKEYIPEAVLAKYGKDGRSVHFLSYPVVKKEYFDEAIETAVSRMQSVIDLGRNIREKKT 842
Query: 581 IPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKT 640
I +K PL+ V++H+D L+++ L++YI++ELNVR V ++D+ KYGV +A D
Sbjct: 843 ISLKTPLKTLVILHSDESYLKDVEALKNYIIEELNVRDVVITSDEAKYGVEYKAVADWPV 902
Query: 641 LG 642
LG
Sbjct: 903 LG 904
>sp|O13651|SYIC_SCHPO Isoleucine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=irs1 PE=3 SV=1
Length = 1064
Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/673 (47%), Positives = 443/673 (65%), Gaps = 31/673 (4%)
Query: 1 MQSRLETLFK--KEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTS--AFRVLTDTYVTEE 56
M+S L L+K K+ +EIL+ FQG L G +Y+PLFPYFK AF++ + YV E
Sbjct: 253 MESCLGILYKNPKKANFEILERFQGKALDGQKYEPLFPYFKSTFGERAFKLYSADYVEEG 312
Query: 57 SGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKP 116
SGTG+VHQAP FGE DY A G+I D + CPVD G T+ ++ F G YVKDADK
Sbjct: 313 SGTGIVHQAPAFGEADYDAAWAAGIIDADHQPPCPVDEQGLLTSEITDFAGQYVKDADKE 372
Query: 117 IIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWV 176
II+ LK LV + HSYPFCWRSDTPLIY+AVPSWF+RV+ + ++++ T+WV
Sbjct: 373 IIRSLKASGHLVKHSQIFHSYPFCWRSDTPLIYRAVPSWFVRVKEITNEMVENVMSTHWV 432
Query: 177 PEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVE 236
P+ +++KRF NWL+ ARDW ISRNRYWGTPIPLWVSDD EE+VC+GSI EL LSG+S
Sbjct: 433 PQNIRDKRFANWLKNARDWNISRNRYWGTPIPLWVSDDYEEVVCIGSIKELEELSGVSNI 492
Query: 237 KDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPA 296
D+HR+S+D +TIPS + GK L RV EVFDCWFESGSMPYA H+PF+ +F FPA
Sbjct: 493 TDIHRDSIDHITIPS-KKGKGTLHRVSEVFDCWFESGSMPYASRHYPFERIEEFKHGFPA 551
Query: 297 DFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPM-- 354
DFI+EG+DQTRGWFYTL V+ T LF +AP++N+I +GLV+A+DG+KMSK +NYP+P
Sbjct: 552 DFISEGVDQTRGWFYTLTVLGTLLFDKAPYKNVIVSGLVMAEDGKKMSKRLKNYPEPNLI 611
Query: 355 -----EPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLI 409
+ + N V+ ++ K + EV R+ + W +
Sbjct: 612 IEKYGSDALRLYLINSPVVRAEILKFKEDGVR-----EVVTRVL-IPWWNSYKFFEAQAA 665
Query: 410 LKEKVLLANDAEEKLSFQYNEAEG-STNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPR 468
L +KV + F +++A S+N+MD WI++ +SLI FV +EM YRLYTVVP+
Sbjct: 666 LYKKVTGKD-------FVFDDAATLSSNVMDRWILARCQSLIGFVDEEMKQYRLYTVVPQ 718
Query: 469 LVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQ 528
L+ I+ +TNWY+R NRRRLKGE G + ALN L +VLFT+VR+M P+TPF+ E++YQ
Sbjct: 719 LLGLIEEMTNWYIRFNRRRLKGEDGEIETINALNVLFEVLFTLVRIMGPFTPFITENIYQ 778
Query: 529 NLRHLT--GRLE---RSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPI 583
+LR+ + E RS+HF+ P + D+ + R VKRMQ+++EL R +RE+ I +
Sbjct: 779 HLRNYMPIDKNEISLRSVHFLPFPTYKSELDDETVLRRVKRMQTIIELARYVREQNNISL 838
Query: 584 KYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGA 643
K PL+ +VI + + L++ + LE YI +ELNVR V F+++++KYGV + D LG
Sbjct: 839 KTPLKTLIVILTNEEYLEDAKLLERYIAEELNVREVVFTSNEEKYGVVYSVQADWPVLGK 898
Query: 644 RLKTAFKPITQAI 656
+L+ + +A+
Sbjct: 899 KLRKDMARVKKAL 911
>sp|P36422|SYI_TETTH Isoleucine--tRNA ligase OS=Tetrahymena thermophila GN=ILSA PE=3
SV=1
Length = 1081
Score = 588 bits (1515), Expect = e-167, Method: Compositional matrix adjust.
Identities = 305/673 (45%), Positives = 423/673 (62%), Gaps = 34/673 (5%)
Query: 2 QSRLETLFKKEEE-YEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESG 58
+ RL L+KK+++ Y+IL+ F+GS L G +Y+PLFPYF + FR+L +VT ++G
Sbjct: 265 ECRLPELYKKDKDGYKILEKFKGSELVGREYEPLFPYFLSRKQDGCFRILAGDFVTADAG 324
Query: 59 TGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPII 118
TG+VH AP FG+DDY+V +A +I D V PVD +G FT VS F G+Y+K+ADK I
Sbjct: 325 TGIVHCAPGFGDDDYKVSVANNIIKPDDPPV-PVDENGHFTNVVSDFAGVYIKEADKLIR 383
Query: 119 KHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPE 178
K+LKE+ L+ S KH+YPFCWRSDTPLIYKAV WFI+V + DLL N YWVP+
Sbjct: 384 KNLKERGLLLVDSSFKHNYPFCWRSDTPLIYKAVHCWFIKVTALKDDLLANNKKAYWVPK 443
Query: 179 FVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKD 238
F +E RF NWL+ DW SR+R+WG PIP+WVS+D EE+VC+GS+ EL +L+G + D
Sbjct: 444 FAQEGRFNNWLQNVSDWCFSRSRFWGNPIPIWVSEDFEEVVCIGSVEELKKLTGATEITD 503
Query: 239 LHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFD-NRRDFDDRFPAD 297
LH++ +D +TIPS + GK LRR+ EVFDCWFESGSMPY Q H+PF N +F RFPAD
Sbjct: 504 LHKDFIDHLTIPS-QKGKGVLRRIDEVFDCWFESGSMPYGQQHYPFSMNEEEFSKRFPAD 562
Query: 298 FIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPP 357
FI EGIDQTRGWFYTL VISTAL P++NLI NG+VLA DG+KMSKSK+NY DP+
Sbjct: 563 FIGEGIDQTRGWFYTLNVISTALRNSNPYKNLIVNGIVLAADGKKMSKSKKNYDDPL--- 619
Query: 358 FKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGR---------LCPVHVWEPVHVWSVCL 408
LIA+ + + M S + M + P W + + +
Sbjct: 620 ---LIASKYSVDAIRLYMINSPLVRAEEMSFKSEGVFAVKKDIFLP---WYNAYKFLIQS 673
Query: 409 ILKEKVLLANDA--EEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVV 466
I + ++ D E+LS + TN D WII ++LI +VR EM Y LY VV
Sbjct: 674 ITRWELATGKDYMFNEQLSV---DTTKLTNPTDRWIIISCQNLINYVRIEMEKYHLYNVV 730
Query: 467 PRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHL 526
PRL+ F++NLTNWY+R+NR RLKG+ G + + +LN L V+ +M+P PF+ E
Sbjct: 731 PRLIHFLENLTNWYIRLNRNRLKGDYGLEEQETSLNVLFNVILNSTILMSPLVPFITESF 790
Query: 527 YQNLRHL----TGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIP 582
YQNLR + + LE SIHF+ +P P + ++D++IER+ +RMQ+++ R +RE+ +
Sbjct: 791 YQNLRKVIPKGSSYLEESIHFLRIPTPKQELLDEKIERNFERMQNIINFARTLREKRKVS 850
Query: 583 IKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLG 642
+K P+ VI+ D + ++ YI E+N ++ + Y V L+A P+HK LG
Sbjct: 851 LKQPIMSLTVINQDQEFHDSLKDYIQYIEDEINTPSILHEINTANY-VDLKAIPNHKLLG 909
Query: 643 ARLKTAFKPITQA 655
+L + +A
Sbjct: 910 QKLGKEYNKDLKA 922
>sp|Q6MKX0|SYI_BDEBA Isoleucine--tRNA ligase OS=Bdellovibrio bacteriovorus (strain ATCC
15356 / DSM 50701 / NCIB 9529 / HD100) GN=ileS PE=3 SV=1
Length = 1056
Score = 558 bits (1438), Expect = e-158, Method: Compositional matrix adjust.
Identities = 298/664 (44%), Positives = 409/664 (61%), Gaps = 35/664 (5%)
Query: 2 QSRLETLFKK-EEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESG 58
Q+ L ++FKK +EE E+L +G+ L GL Y+PLFPYF + AFR+++ +VT ESG
Sbjct: 268 QALLSSVFKKADEEVEVLQMMKGTELVGLTYEPLFPYFGDRADKGAFRIISSDHVTTESG 327
Query: 59 TGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPII 118
TGVVH AP FGE+DY C G+ +V PVD G FT V + G VK+ADK II
Sbjct: 328 TGVVHMAPAFGEEDYYACAKAGI-----PMVNPVDDDGMFTMEVPDYAGKRVKEADKDII 382
Query: 119 KHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPE 178
LK++ L +++HSYPFC+RSDTPLIY+AV SWF+ V+ + ++L+ N T WVP+
Sbjct: 383 ADLKKRGNLFKQDTIQHSYPFCYRSDTPLIYRAVSSWFVAVEKIKEELIANNKQTSWVPD 442
Query: 179 FVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKD 238
+++ RFGNWL ARDWAISRNR+WGTP+P+W + +G E++C+GS AEL +LSG V+ D
Sbjct: 443 HLRDGRFGNWLEGARDWAISRNRFWGTPLPIWRNAEG-EVMCIGSRAELEKLSGQKVD-D 500
Query: 239 LHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADF 298
LH E VD +TIPS GK PL+RV V DCWFESGSMPYAQ +P + DF FPADF
Sbjct: 501 LHIEFVDKITIPS-PTGKSPLKRVDGVLDCWFESGSMPYAQWGYPETSVEDFKKAFPADF 559
Query: 299 IAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPF 358
IAEG+DQTRGWFYTL +I TALF QAPF+N++ NGLVLA+DG+KMSKS +NYPDPME
Sbjct: 560 IAEGLDQTRGWFYTLSIIGTALFNQAPFKNVVVNGLVLAEDGRKMSKSLKNYPDPME-VL 618
Query: 359 KNLIANGLVL------SSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKE 412
A+ L L Q++ S+K D + R + W
Sbjct: 619 NQHGADALRLYLIDSPVVKAQELKFSEKGVYDIV----RKILLRWWNSYS---------- 664
Query: 413 KVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLF 472
AN A +A+ S NI+D W++S LI KEM AYRLY VVP L+ F
Sbjct: 665 --FFANYANIDGFVPKGDAKKSPNILDQWVLSRLNGLIANTHKEMDAYRLYNVVPHLLQF 722
Query: 473 IDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH 532
I++LTN Y+R NR +G P + A +L +VL T+ R+MAP+ PF+ E Y+NL
Sbjct: 723 IEDLTNTYIRFNRSLFWQDGMPETKRYAYETLHEVLVTLSRLMAPFAPFMSEVTYKNLAQ 782
Query: 533 LTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVV 592
+ + S+H P + ++ E+E +VK M ++V LGR RE++ + K PL E +
Sbjct: 783 VLKDKKDSVHLESFPTADLSMLRPELEEAVKAMDTLVTLGRNHREKIGVKAKIPLNEIKI 842
Query: 593 IHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPI 652
IH A+ L+ ++ E + + ELN R V ++ ++ ++ V + A+ + LG RL K +
Sbjct: 843 IHRSAELLETLKKFEPFFVDELNFRKVVYNPNEDQF-VQVTAKANFPVLGKRLGPKMKAV 901
Query: 653 TQAI 656
I
Sbjct: 902 GAGI 905
>sp|Q9Z972|SYI_CHLPN Isoleucine--tRNA ligase OS=Chlamydia pneumoniae GN=ileS PE=3 SV=1
Length = 1043
Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/655 (41%), Positives = 384/655 (58%), Gaps = 36/655 (5%)
Query: 9 FKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGVVHQAP 66
F EE+ IL+SF G L G Y+P F +F K AFRV+ ++V E GTGVVH AP
Sbjct: 266 FSNPEEFVILESFSGKDLVGRTYEPPFTFFQSKREEGAFRVIAASFVEESEGTGVVHMAP 325
Query: 67 YFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSR 126
FGE D+ VC V +VCPVDA G FT + + G Y+K ADK IIK LK++ R
Sbjct: 326 AFGEGDFLVCKENHV-----PLVCPVDAHGSFTEEIPQYQGQYIKHADKEIIKFLKKEGR 380
Query: 127 LVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFG 186
+ G+VKH YPFCWR+DTPLIYKAV SWF+ V+ + +L+ NS +WVPE ++E RFG
Sbjct: 381 IFYHGTVKHRYPFCWRTDTPLIYKAVNSWFVAVEKIKDKMLRANSSIHWVPEHIQEGRFG 440
Query: 187 NWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDS 246
WL ARDWAISRNRYWGTPIP+W S DG EI+ VGSI EL L+G + D+HR +D
Sbjct: 441 KWLEGARDWAISRNRYWGTPIPIWKSADG-EILVVGSIRELEELTGTQI-TDIHRHFIDD 498
Query: 247 VTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQT 306
+ I V+ GK P R+P VFDCWF+SG+MPYAQ H+PF+N+++ ++ FPADFIAEG+DQT
Sbjct: 499 LNI--VKDGK-PFHRIPYVFDCWFDSGAMPYAQNHYPFENQKETEEAFPADFIAEGLDQT 555
Query: 307 RGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGL 366
RGWFYTL VIS LF + FRN I NG++LA+DG KMSK NYP P + A+ L
Sbjct: 556 RGWFYTLTVISAILFDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSP-KYVLDTYGADAL 614
Query: 367 VLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSF 426
L + K++ + G L + L L + N E F
Sbjct: 615 RLYLLHSVVVKAEDLRFSDKGIEGVLK-----------QILLPLTNVLSFFNTYAELYGF 663
Query: 427 --QYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMN 484
+ + E + +D WI+S S++ VR+ M+ Y L V V FID+LTNWY+R
Sbjct: 664 DPKSQDIEPAYTEIDQWILSNLYSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRC 723
Query: 485 RRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLER---SI 541
RRR D + A ++L +VL +V+AP+ PFL E +YQ L +LE+ S+
Sbjct: 724 RRRFWEAEDTPDRRAAFSTLYEVLTVFCKVIAPFVPFLAEDIYQKL-----KLEKEPESV 778
Query: 542 HFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQ 601
H PQ I ++E+ + ++ +V LG +R+ + ++ PL V+ + + L
Sbjct: 779 HLCDFPQVEMDKILPDLEKRMHDIREIVGLGHSLRKEHKLKVRQPLANFYVVGSKDR-LS 837
Query: 602 EIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAI 656
++T E I +ELNV+ V F + + + +P+ + LG ++ + K + +A+
Sbjct: 838 LLKTFEGLIAEELNVKNVIFYEEAPSF-IYTTVKPNFRMLGKKVGSKMKEVQKAL 891
>sp|Q73JB2|SYI_TREDE Isoleucine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=ileS PE=3 SV=1
Length = 1100
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 280/685 (40%), Positives = 387/685 (56%), Gaps = 53/685 (7%)
Query: 4 RLETLFKKE-----EEYEILDSFQGSTLKGLQYQPLFPYFKHVTS------------AFR 46
RLE F K +EY+++ + +G+ L+GL+Y+PLFPYFK++ + AFR
Sbjct: 278 RLEAYFAKSGKEEAKEYKLIWTKKGAELEGLRYEPLFPYFKNLAADENGKNAEAGQGAFR 337
Query: 47 VLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFL 106
VL +VT E GTG+VH AP FGEDD R+ GV T VCPVDA FT VS +
Sbjct: 338 VLIGDFVTTEDGTGIVHTAPGFGEDDNRIFKDTGVPT-----VCPVDAECKFTHEVSDYQ 392
Query: 107 GLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDL 166
GL+VKDADK I++ LK + +L + HSYP CWR +PLIY+AV SWF+ V + L
Sbjct: 393 GLFVKDADKQIMERLKTEGKLFKKAQILHSYPHCWRCSSPLIYRAVASWFVSVTKIKDKL 452
Query: 167 LKCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAE 226
L NS W P+ +K RFG WL ARDWAISRNRYWG PIP+W D E +CVGS E
Sbjct: 453 LNANSKINWQPDHIKTGRFGKWLEGARDWAISRNRYWGNPIPIWKCPDCGETICVGSREE 512
Query: 227 LHRLSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDN 286
L LSG+ E D+H+ VD ++IP + G ++RV EV DCWFESGSMPYAQ H+PF+N
Sbjct: 513 LKELSGVFPE-DMHKHFVDKISIPCKKCGG-TMKRVSEVLDCWFESGSMPYAQQHYPFEN 570
Query: 287 RRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKS 346
+ F+ FPADFI+EG+DQTRGWFYTL +++ ALF + F+N I NGLVLA+DG+KMSKS
Sbjct: 571 KEHFEKNFPADFISEGLDQTRGWFYTLTILAAALFDEPAFKNCIVNGLVLAEDGKKMSKS 630
Query: 347 KRNYPDPME-------PPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWE 399
RNY DP E + + N V+ +D K S + D + +G L P W
Sbjct: 631 LRNYTDPNEVIKQFGADALRLFLMNSNVVKADDLKY--SDEGVRDVL--KGILIP--FWN 684
Query: 400 PVHVWSVCLIL-------KEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEF 452
+ + KV ++ E+ + N N +D WI+S +E L+
Sbjct: 685 SYSFYITYANIDGVKPPHNAKVDGKDEGVEEFLAKLN------NPLDLWILSVTEKLVAD 738
Query: 453 VRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMV 512
V + + Y L +P +V +ID L NWY+R +RRR D A +L + L
Sbjct: 739 VTEALDKYDLSQAIPPMVEYIDLLNNWYIRRSRRRFWKSENDGDKSQAYETLYRALKKFS 798
Query: 513 RVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELG 572
V AP PF+ E ++QNLR + L SIH P N I + E+E +K +Q V +G
Sbjct: 799 LVAAPVVPFITESIWQNLRTESDAL--SIHLADYPDYNEKIRNSELEFKMKTVQKAVSMG 856
Query: 573 RVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSL 632
R +R + + I+ PL+ ++ + + + + +E I++ELNV+ V F +K+ V
Sbjct: 857 RALRYQFNLKIRQPLKAVEIVTLNPEEKRVLLEMEESIIEELNVKEVIFH-EKEDELVEY 915
Query: 633 RAEPDHKTLGARLKTAFKPITQAIK 657
A+ + K LG L K I+
Sbjct: 916 SAKANFKVLGKELGPLMKKAAAIIE 940
>sp|Q6MDY1|SYI_PARUW Isoleucine--tRNA ligase OS=Protochlamydia amoebophila (strain
UWE25) GN=ileS PE=3 SV=1
Length = 1038
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/656 (40%), Positives = 382/656 (58%), Gaps = 40/656 (6%)
Query: 4 RLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGV 61
RL+ +K EY I+ F GS L+G Y PLF YF + + AF+++ + ++ E GTG+
Sbjct: 261 RLKGYYKDSGEYTIVRKFPGSELEGQHYIPLFDYFNDRAHSGAFKIILEDSISVEEGTGI 320
Query: 62 VHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHL 121
V AP FGE D+ C G+ + VCPVD +G FT + + G++VK+ADK IIK L
Sbjct: 321 VQTAPAFGEIDFYACQKAGI-----DPVCPVDNNGQFTDEIPEYKGIFVKEADKDIIKRL 375
Query: 122 KEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVK 181
K+Q++++ G+ H YPFC RSDTPLIYK V +WF+ V+ + LL NS +W PE ++
Sbjct: 376 KQQAKVIHQGTCHHRYPFCPRSDTPLIYKTVRTWFVAVEKIKDRLLAANSQIHWTPEHIQ 435
Query: 182 EKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHR 241
RFG WL ARDWAISRNRYWGTPIPLW + DG EI VGSI EL +L+G + DLHR
Sbjct: 436 YGRFGKWLEGARDWAISRNRYWGTPIPLWRAQDG-EIHVVGSIEELKQLTGNPL-TDLHR 493
Query: 242 ESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+D ++ + GK +R+PEVFDCWFESGSMPYAQ H+PF+NR F+ FPADFIAE
Sbjct: 494 HFIDEMSFE--KNGK-TFKRIPEVFDCWFESGSMPYAQNHYPFENRELFEQNFPADFIAE 550
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPME------ 355
G+DQTRGWFYTL V+S ALF Q +N+I NGL+LA++G KMSK +NYPDP E
Sbjct: 551 GLDQTRGWFYTLTVLSAALFDQPAMKNVIVNGLILAENGAKMSKRLKNYPDPAEVIQQYG 610
Query: 356 -PPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKV 414
+ + + + +D SKS + +R L P +W+
Sbjct: 611 ADAIRLYMLHSPAVKADDLSFSKSGVE----LVLRQILLP--------LWNAYTFFLTYA 658
Query: 415 LLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFID 474
+ N KL + +D WIIS L+ V + M Y L V V F+D
Sbjct: 659 RIYNWKPGKL------VQKPELAIDQWIISLLNKLVHEVEQGMDDYDLSRSVEPFVNFVD 712
Query: 475 NLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLT 534
LTNWY+R +RRR + + A +L VL + ++ APY PF+ E +YQNLR +
Sbjct: 713 QLTNWYIRRSRRRFWDDKESPNRTQAFETLYYVLIELTKISAPYVPFISEAIYQNLR--S 770
Query: 535 GRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIH 594
+ S+H P + +++E ++ +Q V LG +R+ + ++ PL A +
Sbjct: 771 CDMPESVHLCDFPHYQQLSRHEKLEAEMEAVQVTVSLGHALRKEHKLKVRQPLATAQLAS 830
Query: 595 NDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFK 650
D + L ++ + I +ELNV+ +TFS++++ + VSL+A+P+ + LG ++ K
Sbjct: 831 ADPKVLDFLKEQQHLISEELNVKEITFSSNEKDF-VSLKAKPNFRVLGKKVGKLMK 885
>sp|O84022|SYI_CHLTR Isoleucine--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=ileS PE=3 SV=1
Length = 1036
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/675 (40%), Positives = 388/675 (57%), Gaps = 63/675 (9%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGT 59
Q L F E YE + G +L G Y+PLFPYF K AFR+L ++ E GT
Sbjct: 257 QESLPRWFPDRESYEWIGQLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGT 316
Query: 60 GVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIK 119
G+VH AP FGE D+ C V +VCPVD GC+TA V F+G Y+K ADK I +
Sbjct: 317 GIVHMAPAFGEADFFACQEHNV-----PLVCPVDNQGCYTAEVKDFVGEYIKSADKGIAR 371
Query: 120 HLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEF 179
LK +++L G+V+H YPFCWR+D+PLIYKAV SWF+ V+ + +LK N +W PE
Sbjct: 372 RLKNENKLFYQGTVRHRYPFCWRTDSPLIYKAVNSWFVAVEKVKSKMLKANESIHWTPEH 431
Query: 180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL 239
+K+ RFG WL ARDWAISRNRYWGTPIP+W SDDG E++ +GSI EL LSG + DL
Sbjct: 432 IKQGRFGKWLEGARDWAISRNRYWGTPIPIWRSDDG-ELLVIGSIQELEALSGQKI-VDL 489
Query: 240 HRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFI 299
HR +D + I + GK RR+P VFDCWF+SG+MPYAQ H+PF+ + + FPADFI
Sbjct: 490 HRHFIDEIEIN--QNGK-SFRRIPYVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFI 546
Query: 300 AEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPM----- 354
AEG+DQTRGWFYTL VI+ ALF Q F+N+I NG++LA+DG KMSK NYP P
Sbjct: 547 AEGLDQTRGWFYTLTVIAAALFDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDA 606
Query: 355 --EPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKE 412
+ + N +V+ ++ + S V +LK+
Sbjct: 607 YGADALRLYLLNSVVVKAEDLRFSDK--------------------------GVESVLKQ 640
Query: 413 KVLLANDAEEKLSF--QYNEAEG-----STNI----MDAWIISFSESLIEFVRKEMAAYR 461
+L ++A L+F Y E G + NI +D WI+S SL+ R+ M+ Y
Sbjct: 641 VLLPLSNA---LAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTRESMSQYD 697
Query: 462 LYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPF 521
L+ V V FI++LTNWY+R +RRR AD + A ++L +VL +V+AP+ PF
Sbjct: 698 LHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKVIAPFIPF 757
Query: 522 LCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTI 581
+ E +YQ LR T S+H P I ++ER ++ ++ +V LG +R+ +
Sbjct: 758 IAEDMYQQLRGETD--PESVHLCDFPHVVLEKILPDLERKMQDIREIVALGHSLRKEHKL 815
Query: 582 PIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTL 641
++ PL+ ++ + + + + + S I +ELNV+ V F ++ +Y +L +P+ +TL
Sbjct: 816 KVRQPLQNVYIVGSKER-KEALAQVGSLIGEELNVKDVHFCSETPEYVTTL-IKPNFRTL 873
Query: 642 GARLKTAFKPITQAI 656
G ++ I +A+
Sbjct: 874 GKKVGNRLPEIQRAL 888
>sp|Q3KN03|SYI_CHLTA Isoleucine--tRNA ligase OS=Chlamydia trachomatis serovar A (strain
HAR-13 / ATCC VR-571B) GN=ileS PE=3 SV=1
Length = 1036
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/675 (40%), Positives = 388/675 (57%), Gaps = 63/675 (9%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGT 59
Q L F E YE + G +L G Y+PLFPYF K AFR+L ++ E GT
Sbjct: 257 QESLPRWFPDRESYEWIGQLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGT 316
Query: 60 GVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIK 119
G+VH AP FGE D+ C V +VCPVD GC+TA V F+G Y+K ADK I +
Sbjct: 317 GIVHMAPAFGEADFFACQEHNV-----PLVCPVDNQGCYTAEVKDFVGEYIKSADKGIAR 371
Query: 120 HLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEF 179
LK +++L G+V+H YPFCWR+D+PLIYKAV SWF+ V+ + +LK N +W P
Sbjct: 372 RLKNENKLFYQGTVRHRYPFCWRTDSPLIYKAVNSWFVAVEKVKSKMLKANESIHWTPGH 431
Query: 180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL 239
+K+ RFG WL ARDWAISRNRYWGTPIP+W SDDG E++ +GSI EL LSG + DL
Sbjct: 432 IKQGRFGKWLEGARDWAISRNRYWGTPIPIWRSDDG-ELLVIGSIQELEALSGQKI-VDL 489
Query: 240 HRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFI 299
HR +D + I + GK RR+P VFDCWF+SG+MPYAQ H+PF+ + + FPADFI
Sbjct: 490 HRHFIDEIEIN--QNGK-SFRRIPYVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFI 546
Query: 300 AEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPM----- 354
AEG+DQTRGWFYTL VI+ ALF Q F+N+I NG++LA+DG KMSK NYP P
Sbjct: 547 AEGLDQTRGWFYTLTVIAAALFDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDA 606
Query: 355 --EPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKE 412
+ + N +V+ ++ + S V +LK+
Sbjct: 607 YGADALRLYLLNSVVVKAEDLRFSDK--------------------------GVESVLKQ 640
Query: 413 KVLLANDAEEKLSF--QYNEAEG-----STNI----MDAWIISFSESLIEFVRKEMAAYR 461
+L ++A L+F Y E G + NI +D WI+S SL+ R+ M+ Y
Sbjct: 641 VLLPLSNA---LAFYKTYAELYGFDPKETDNIELAEIDCWILSSLYSLVGKTRESMSQYD 697
Query: 462 LYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPF 521
L+ V V FI++LTNWY+R +RRR AD + A ++L +VL +V+AP+ PF
Sbjct: 698 LHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKVIAPFIPF 757
Query: 522 LCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTI 581
+ E +YQ LR T S+H P I ++ER ++ ++ +V LG +R+ +
Sbjct: 758 IAEDMYQQLRGETD--PESVHLCDFPHVVLEKILPDLERKMQDIREIVALGHSLRKEHKL 815
Query: 582 PIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTL 641
++ PL+ ++ + + ++ + + S I +ELNV+ V F ++ +Y +L +P+ +TL
Sbjct: 816 KVRQPLQNVYIVGSKER-MEALAQVGSLIGEELNVKDVHFCSETPEYVTTL-IKPNFRTL 873
Query: 642 GARLKTAFKPITQAI 656
G ++ I +A+
Sbjct: 874 GKKVGNRLPEIQRAL 888
>sp|B0BB05|SYI_CHLTB Isoleucine--tRNA ligase OS=Chlamydia trachomatis serovar L2b
(strain UCH-1/proctitis) GN=ileS PE=3 SV=1
Length = 1036
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/675 (40%), Positives = 387/675 (57%), Gaps = 63/675 (9%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGT 59
Q L F E YE + G +L G Y+PLFPYF K AFR+L ++ E GT
Sbjct: 257 QESLPRWFPDRESYEWIGQLSGKSLVGQSYEPLFPYFQDKKELGAFRILPADFIEESEGT 316
Query: 60 GVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIK 119
G+VH AP FGE D+ C V +VCPVD GC+TA V F+G Y+K ADK I +
Sbjct: 317 GIVHMAPAFGEADFFACQEHNV-----PLVCPVDNQGCYTAEVKDFVGEYIKSADKGIAR 371
Query: 120 HLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEF 179
LK +++L G+V+H YPFCWR+D+PLIYKAV SWF+ V+ + +LK N +W P
Sbjct: 372 RLKNENKLFYQGTVRHRYPFCWRTDSPLIYKAVNSWFVAVEKVKSKMLKANESIHWTPGH 431
Query: 180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL 239
+K+ RFG WL ARDWAISRNRYWGTPIP+W SDDG E++ +GSI EL LSG + DL
Sbjct: 432 IKQGRFGKWLEGARDWAISRNRYWGTPIPIWRSDDG-ELLVIGSIQELEALSGQKI-VDL 489
Query: 240 HRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFI 299
HR +D + I + GK RR+P VFDCWF+SG+MPYAQ H+PF+ + + FPADFI
Sbjct: 490 HRHFIDEIEIN--QNGK-SFRRIPYVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFI 546
Query: 300 AEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPM----- 354
AEG+DQTRGWFYTL VI+ ALF Q F+N+I NG++LA+DG KMSK NYP P
Sbjct: 547 AEGLDQTRGWFYTLTVIAAALFDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDA 606
Query: 355 --EPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKE 412
+ + N +V+ ++ + S V +LK+
Sbjct: 607 YGADALRLYLLNSVVVKAEDLRFSDK--------------------------GVESVLKQ 640
Query: 413 KVLLANDAEEKLSF--QYNEAEG-----STNI----MDAWIISFSESLIEFVRKEMAAYR 461
+L ++A L+F Y E G + NI +D WI+S SL+ R+ M+ Y
Sbjct: 641 VLLPLSNA---LAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLLGKTRESMSQYD 697
Query: 462 LYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPF 521
L+ V V FI++LTNWY+R +RRR AD + A ++L +VL +V+AP+ PF
Sbjct: 698 LHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKVIAPFIPF 757
Query: 522 LCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTI 581
+ E +YQ LR T S+H P I +ER ++ ++ +V LG +R+ +
Sbjct: 758 ISEDMYQQLRGETD--PESVHLCDFPHVVLEKILPNLERKMQDIREIVALGHSLRKEHKL 815
Query: 582 PIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTL 641
++ PL+ ++ + + ++ + + S I +ELNV+ V F ++ +Y +L +P+ +TL
Sbjct: 816 KVRQPLQNVYIVGSQER-MEALAQVGSLIGEELNVKDVHFCSETPEYVTTL-IKPNFRTL 873
Query: 642 GARLKTAFKPITQAI 656
G ++ I +A+
Sbjct: 874 GKKVGNRLPEIQRAL 888
>sp|Q822L8|SYI_CHLCV Isoleucine--tRNA ligase OS=Chlamydophila caviae (strain GPIC)
GN=ileS PE=3 SV=1
Length = 1043
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/664 (39%), Positives = 386/664 (58%), Gaps = 39/664 (5%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKH--VTSAFRVLTDTYVTEESGT 59
Q L F + YEIL+SF G+ L G Y+P F +F+H A+++L+ ++V E GT
Sbjct: 260 QGCLSRWFSDPDSYEILESFLGTALVGKSYEPPFSFFEHKRAEGAYKILSGSFVEESEGT 319
Query: 60 GVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIK 119
GVVH AP FGE D+ VC V IVCPVD GCFT + + G Y+K DK IIK
Sbjct: 320 GVVHMAPAFGEADFFVCKEHHV-----PIVCPVDNHGCFTEEIPEYQGQYIKSCDKGIIK 374
Query: 120 HLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEF 179
LK ++ G+V H YPFCWR+DTPLIYK V SWF+ V+ + +L+ N +WVPE
Sbjct: 375 SLKNLGKVFYHGTVMHRYPFCWRTDTPLIYKTVNSWFVSVEKIKDKMLRANQKIHWVPEH 434
Query: 180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL 239
+KE RFG WL ARDWAISRNRYWGTPIP+W S +G EI+ +GS+ EL L+G + DL
Sbjct: 435 IKEGRFGKWLDGARDWAISRNRYWGTPIPIWKSKEG-EILVIGSVKELEELTGEKI-SDL 492
Query: 240 HRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFI 299
H +D + + + GK +RVP VFDCWF+SG+MPYAQ H+PF+N+++ + FPADFI
Sbjct: 493 HCHFIDQLKVE--KEGK-TFQRVPYVFDCWFDSGAMPYAQNHYPFENQKETEAGFPADFI 549
Query: 300 AEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPM----- 354
AEG+DQTRGWFYTL VIS+ALF Q F+N I NG+VLA+DG KMSK NYP PM
Sbjct: 550 AEGLDQTRGWFYTLTVISSALFDQTAFKNAIVNGIVLAEDGNKMSKRLNNYPSPMGIMNT 609
Query: 355 --EPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKE 412
+ + + +V+ ++ + S ++ L P+ +V S +
Sbjct: 610 YGADALRLYLLDSVVVKAEDLRFSDKGVESI----LKQILLPL-----TNVLSFFKTYTD 660
Query: 413 KVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLF 472
L DA+ Y++ E + + +D WI+S +++ VR+ M++Y L T V V F
Sbjct: 661 --LYGFDAD-----NYDKEEITYSEIDRWILSNLYTVVGKVRESMSSYNLNTAVNPFVTF 713
Query: 473 IDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH 532
ID+LTNWY+R RRR D + A +L +VL RV+AP+ PF+ E +YQ ++
Sbjct: 714 IDDLTNWYIRRCRRRFWESEDTPDRRAAFATLYEVLTVFCRVIAPFIPFISEDIYQQIK- 772
Query: 533 LTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVV 592
T S+H P + + ++E+ + + +V LG +R+ + ++ PL +
Sbjct: 773 -TEHSAESVHLCDFPHIDLAKVFPDLEQRMSDAREIVGLGHSLRKEHKLKVRQPLANFYI 831
Query: 593 IHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPI 652
+ + L E+ + E I +ELNV+ + F + + V +P+ ++LG ++ K +
Sbjct: 832 VGPKDR-LDELTSFEQLIAEELNVKNIVFYKETPSF-VKTTVKPNFRSLGRKVGEKIKDV 889
Query: 653 TQAI 656
+A+
Sbjct: 890 QRAL 893
>sp|B0B9C6|SYI_CHLT2 Isoleucine--tRNA ligase OS=Chlamydia trachomatis serovar L2 (strain
434/Bu / ATCC VR-902B) GN=ileS PE=3 SV=1
Length = 1036
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 270/675 (40%), Positives = 386/675 (57%), Gaps = 63/675 (9%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGT 59
Q L F E YE + G +L G Y+PLFPYF K AFR+L ++ E GT
Sbjct: 257 QESLPRWFPDRESYEWIGQLSGKSLVGQSYEPLFPYFQDKKELGAFRILPADFIEESEGT 316
Query: 60 GVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIK 119
G+VH AP FGE D+ C V +VCPVD GC+TA V F+G Y+K ADK I +
Sbjct: 317 GIVHMAPAFGEADFFACQEHNV-----PLVCPVDNQGCYTAEVKDFVGEYIKSADKGIAR 371
Query: 120 HLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEF 179
LK +++L G+V+H YPFCWR+D+PLIYKAV SWF+ V+ + +LK N +W P
Sbjct: 372 RLKNENKLFYQGTVRHRYPFCWRTDSPLIYKAVNSWFVAVEKVKSKMLKANESIHWTPGH 431
Query: 180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL 239
+K+ RFG WL ARDWAISRNRYWGTPIP+W SDDG E++ +GSI EL LSG + DL
Sbjct: 432 IKQGRFGKWLEGARDWAISRNRYWGTPIPIWRSDDG-ELLVIGSIQELEALSGQKI-VDL 489
Query: 240 HRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFI 299
HR +D + I + GK RR+P VFDCWF+SG+MPYAQ H+PF+ + + FPADFI
Sbjct: 490 HRHFIDEIEIN--QNGK-SFRRIPYVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFI 546
Query: 300 AEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPM----- 354
AEG+DQTRGWFYTL VI+ ALF Q F+N+I NG++LA+DG KMSK NYP P
Sbjct: 547 AEGLDQTRGWFYTLTVIAAALFDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDA 606
Query: 355 --EPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKE 412
+ + N +V+ ++ + S V +LK+
Sbjct: 607 YGADALRLYLLNSVVVKAEDLRFSDK--------------------------GVESVLKQ 640
Query: 413 KVLLANDAEEKLSF--QYNEAEG-----STNI----MDAWIISFSESLIEFVRKEMAAYR 461
+L ++A L+F Y E G + NI +D WI+S SL+ R+ M+ Y
Sbjct: 641 VLLPLSNA---LAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLLGKTRESMSQYD 697
Query: 462 LYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPF 521
L+ V V FI++LTNWY+R +RRR D + A ++L +VL +V+AP+ PF
Sbjct: 698 LHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSTDRRAAFSTLYEVLVVFSKVIAPFIPF 757
Query: 522 LCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTI 581
+ E +YQ LR T S+H P I +ER ++ ++ +V LG +R+ +
Sbjct: 758 ISEDMYQQLRGETD--PESVHLCDFPHVVLEKILPNLERKMQDIREIVALGHSLRKEHKL 815
Query: 582 PIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTL 641
++ PL+ ++ + + ++ + + S I +ELNV+ V F ++ +Y +L +P+ +TL
Sbjct: 816 KVRQPLQNVYIVGSQER-MEALAQVGSLIGEELNVKDVHFCSETPEYVTTL-IKPNFRTL 873
Query: 642 GARLKTAFKPITQAI 656
G ++ I +A+
Sbjct: 874 GKKVGNRLPEIQRAL 888
>sp|Q5L5L0|SYI_CHLAB Isoleucine--tRNA ligase OS=Chlamydophila abortus (strain S26/3)
GN=ileS PE=3 SV=1
Length = 1043
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/664 (40%), Positives = 382/664 (57%), Gaps = 39/664 (5%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGT 59
Q L F + YE+++SF G+ L G Y+P F +F K A+ +L ++V E GT
Sbjct: 260 QGCLSRWFSDPDTYEVIESFPGTALIGKSYEPPFNFFEQKRAEGAYTILPGSFVEESEGT 319
Query: 60 GVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIK 119
GVVH AP FGE D+ VC V +VCPVD GCFT + + G Y+K DK IIK
Sbjct: 320 GVVHMAPAFGEADFFVCKEHHV-----PMVCPVDNHGCFTEEIPEYQGQYIKSCDKGIIK 374
Query: 120 HLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEF 179
LK Q ++ G+V H YPFCWR+DTPLIYK V SWFI V+ + +L+ N +WVPE
Sbjct: 375 SLKNQGKVFYHGTVVHRYPFCWRTDTPLIYKTVNSWFISVEKIKDKMLQANKKIHWVPEH 434
Query: 180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL 239
+KE RFG WL ARDWAISRNRYWGTPIP+W S DG +I+ +GS+ EL +L+G V DL
Sbjct: 435 IKEGRFGKWLEGARDWAISRNRYWGTPIPVWKSKDG-DILVIGSVEELEKLTGEKV-SDL 492
Query: 240 HRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFI 299
H VD + I + GK RVP VFDCWF+SG+MPYAQ H+PF+N+++ + FPADFI
Sbjct: 493 HCHFVDQLKIE--KDGK-SFHRVPYVFDCWFDSGAMPYAQNHYPFENQKETESGFPADFI 549
Query: 300 AEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPME---- 355
AEG+DQTRGWFYTL VIS ALF Q F+N I NG+VLA+DG KMSK NYP PM
Sbjct: 550 AEGLDQTRGWFYTLTVISAALFDQPVFKNAIVNGIVLAEDGNKMSKRLNNYPSPMSIMNT 609
Query: 356 ---PPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKE 412
+ + + +V+ ++ + S ++ L P+ +V S +
Sbjct: 610 YGADALRLYLLDSVVVKAEDLRFSDKGVE----SVLKQVLLPL-----TNVLSFFKTYTD 660
Query: 413 KVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLF 472
L DA Y++ E S + +D WI+S +++ VR+ M++Y L T V V F
Sbjct: 661 --LYGFDAN-----NYDKEEISYSEIDRWILSNLYTVVGKVRESMSSYNLNTAVNPFVTF 713
Query: 473 IDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH 532
ID+LTNWY+R RRR D + A +L +VL RV+AP+ PF+ E +YQ ++
Sbjct: 714 IDDLTNWYIRRCRRRFWESADTPDRRAAFATLYEVLTVFCRVIAPFIPFISEDIYQQIK- 772
Query: 533 LTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVV 592
T S+H P + + ++E+ + + +V LG +R+ + ++ PL V
Sbjct: 773 -TENSLESVHLCDFPYIDLAKVFPDLEQRMGDAREIVGLGHSLRKEHKLKVRQPLANFYV 831
Query: 593 IHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPI 652
+ + L ++ + + I +ELNV+ + F + + V +P+ ++LG R+ K I
Sbjct: 832 VGPKDR-LDQLDSFKQLISEELNVKNIVFYKEAPSF-VKTTVKPNFRSLGRRVGEKIKDI 889
Query: 653 TQAI 656
+A+
Sbjct: 890 QKAL 893
>sp|B2S1H8|SYI_BORHD Isoleucine--tRNA ligase OS=Borrelia hermsii (strain DAH) GN=ileS
PE=3 SV=1
Length = 1044
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/663 (38%), Positives = 379/663 (57%), Gaps = 39/663 (5%)
Query: 4 RLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGV 61
RL +K ++ Y +++ F+G +KG++Y+P+F YF + AFR+ T YVT + GTG+
Sbjct: 262 RLNHYYKDDKTYTVIEQFKGEHIKGIEYEPVFDYFLSQRNKGAFRIHTAEYVTTDDGTGI 321
Query: 62 VHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHL 121
VH AP FGE+DY + +++ P+DA FT V F GL+VKDAD II+ L
Sbjct: 322 VHIAP-FGEEDYNILKKNT----KTDMITPIDAECRFTNEVKDFEGLFVKDADNKIIEKL 376
Query: 122 KEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVK 181
K + L + H YPFC+R+++PLIY+ + SWF+ ++ + + L+K N W+P +K
Sbjct: 377 KSMNLLFKRENFLHRYPFCYRTNSPLIYRPISSWFVNIEAIKEKLIKSNEQINWIPSHLK 436
Query: 182 EKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHR 241
+ RFG WL ARDWAISRNR+WG PIP+W+ +C+GS EL RLSG V DLH+
Sbjct: 437 KGRFGKWLENARDWAISRNRFWGNPIPVWICSKTGNKICIGSKEELERLSGQKV-NDLHK 495
Query: 242 ESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+ +D +T PS G R EV DCWFESGSMPYA H+PF ++ F D FPADFIAE
Sbjct: 496 DKIDKITWPSQYGG--TYVRTSEVLDCWFESGSMPYASKHYPFKDKDKFHDIFPADFIAE 553
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
G+DQTRGWFYTL ++ TALF+Q F+N+I NGLVL+ DG+KMSKS RNY DPME
Sbjct: 554 GLDQTRGWFYTLTILGTALFEQTAFKNVIVNGLVLSSDGRKMSKSLRNYTDPME-VINTF 612
Query: 362 IANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEK 413
A+ L V+ +D K S D ++ + + +W + I+
Sbjct: 613 GADALRLYLVMSPVVRADDLKYS------DDGVKDVLKNIIIPIWNAYSFFITYAII--- 663
Query: 414 VLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFI 473
+K N TNI+D WIIS ESL + + +E+ Y L + L+ FI
Sbjct: 664 --------DKFEPNSNIVLYKTNILDKWIISEIESLKKTLNEEIDKYNLTKSIEELLAFI 715
Query: 474 DNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHL 533
D L NWY+R +RRR D A +L L ++ ++AP+ PFL E +YQNL+
Sbjct: 716 DKLNNWYIRRSRRRFWKSENDNDKIDAYETLYYALKNLMLMLAPFIPFLTEEIYQNLK-- 773
Query: 534 TGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVI 593
T + SIH PQ + +I+ ++E + ++ VV + R +R I I+ P+ ++
Sbjct: 774 TKDEKESIHLNEYPQEIKELINIDLEEKMNFIRKVVSIARALRASHNIKIRKPISTIYIV 833
Query: 594 HNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPIT 653
D + Q + ++ IL+E+N + +++++ V+ +A+ + + LG++L T K +
Sbjct: 834 TKDQKEQQILSEMKEIILEEINSEEIKIKSNEEEL-VTYKAKANFRELGSKLGTNMKAVA 892
Query: 654 QAI 656
I
Sbjct: 893 LEI 895
>sp|B5RN32|SYI_BORDL Isoleucine--tRNA ligase OS=Borrelia duttonii (strain Ly) GN=ileS
PE=3 SV=1
Length = 1044
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/663 (37%), Positives = 383/663 (57%), Gaps = 39/663 (5%)
Query: 4 RLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGV 61
RL ++ E +Y I++ F+G LKG++Y+PLF YF + AF++ T YVT + GTG+
Sbjct: 262 RLNHYYQDENKYVIIEQFKGEHLKGIEYEPLFDYFVNQRNKGAFKIHTAEYVTTDDGTGI 321
Query: 62 VHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHL 121
VH AP FGE+DY++ +++ P+DA FT+ V F GL+VKDAD II+ L
Sbjct: 322 VHIAP-FGEEDYQILKKNT----QTDMITPIDAECKFTSEVKDFEGLFVKDADNKIIEKL 376
Query: 122 KEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVK 181
K + L + H YPFC+R+++PLIY+ + SWF+ ++ + + L++ N W+PE +K
Sbjct: 377 KSMNLLFKRENYLHRYPFCYRTNSPLIYRPISSWFVNIEKIKEKLIRSNEQINWIPEHLK 436
Query: 182 EKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHR 241
+ RFG WL ARDWAISRNR+WG PIP+W +C+GS EL +LSG + DLH+
Sbjct: 437 KGRFGKWLENARDWAISRNRFWGNPIPIWKCSKTGNKICIGSREELEKLSGQKI-IDLHK 495
Query: 242 ESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+ +D +T PS G R EV DCWFESGSMPYA H+PF ++ F + FPADFIAE
Sbjct: 496 DKIDKITWPSKYGG--TYVRTSEVLDCWFESGSMPYASKHYPFKDKDKFQNIFPADFIAE 553
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
G+DQTRGWFYTL ++ TALF++ F+N+I NGLVL+ DG+KMSKS +NY DP++
Sbjct: 554 GLDQTRGWFYTLTILGTALFEKTAFKNVIVNGLVLSSDGKKMSKSLKNYTDPIQ-IINTF 612
Query: 362 IANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEK 413
A+ L V+ +D K S D ++ + + +W + I+
Sbjct: 613 GADALRLYLIMSPVIKADDLKYS------DDGVKDVLKNIIIPIWNAYSFFITYAII--- 663
Query: 414 VLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFI 473
+K + + TNI+D WIIS ESL + + +E+ Y L + L+ FI
Sbjct: 664 --------DKFTPNNHVNLYKTNILDKWIISEIESLKQILNEEIDKYNLTKSIDVLLTFI 715
Query: 474 DNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHL 533
D L NWY+R +RRR D A +L L ++ ++AP+ PFL E +YQNL+
Sbjct: 716 DKLNNWYIRRSRRRFWKSENDNDKTDAYETLYYTLKNLMLMLAPFIPFLTEEIYQNLK-- 773
Query: 534 TGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVI 593
T + SIH PQ + +I+ E+E + + V+ + R +R I I+ P++ +I
Sbjct: 774 TKNEKESIHLNDYPQSIKELINIELEEKMNFTRKVITIARALRASHNIKIRKPIKTIYII 833
Query: 594 HNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPIT 653
+ + +R + IL+E+N + + +++++ V+ +A+ + K LG++L T K +
Sbjct: 834 TKNHKEQNTLREMTEIILEEINAKEIKIKSNEEEL-VTYKAKANFKELGSKLGTNMKSVA 892
Query: 654 QAI 656
AI
Sbjct: 893 LAI 895
>sp|B5RQH0|SYI_BORRA Isoleucine--tRNA ligase OS=Borrelia recurrentis (strain A1) GN=ileS
PE=3 SV=1
Length = 1044
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/663 (37%), Positives = 382/663 (57%), Gaps = 39/663 (5%)
Query: 4 RLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGV 61
RL ++ E +Y I++ F+G LKG++Y+PLF YF + AF++ T YVT + GTG+
Sbjct: 262 RLNHYYQDENKYVIIEQFKGEHLKGIEYEPLFDYFVNQRNKGAFKIHTAEYVTTDDGTGI 321
Query: 62 VHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHL 121
VH AP FGE+DY++ +++ P+DA FT+ V F GL+VKDAD II+ L
Sbjct: 322 VHIAP-FGEEDYQILKKNT----QTDMITPIDAECKFTSEVKDFEGLFVKDADNKIIEKL 376
Query: 122 KEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVK 181
K + L + H YPFC+R+++PLIY+ + SWF+ ++ + + L++ N W+PE +K
Sbjct: 377 KSMNLLFKRENYLHRYPFCYRTNSPLIYRPISSWFVNIEKIKEKLIRSNEQINWIPEHLK 436
Query: 182 EKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHR 241
+ RFG WL ARDWAISRNR+WG PIP+W +C+GS EL +LSG + DLH+
Sbjct: 437 KGRFGKWLENARDWAISRNRFWGNPIPIWKCSKTGNKICIGSREELEKLSGQKI-IDLHK 495
Query: 242 ESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+ +D +T PS G R EV DCWFESGSMPYA H+PF ++ F + FPADFIAE
Sbjct: 496 DKIDKITWPSKYGG--TYVRTSEVLDCWFESGSMPYASKHYPFKDKDKFQNIFPADFIAE 553
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
G+DQTRGWFYTL ++ TALF++ F+N+I NGLVL+ DG+KMSKS +NY DP++
Sbjct: 554 GLDQTRGWFYTLTILGTALFEKTAFKNVIVNGLVLSSDGKKMSKSLKNYTDPIQ-IINTF 612
Query: 362 IANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEK 413
A+ L V+ +D K S D ++ + + +W + I+
Sbjct: 613 GADALRLYLIMSPVIKADDLKYS------DDGVKDVLKNIIIPIWNAYSFFITYAII--- 663
Query: 414 VLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFI 473
+K + TNI+D WIIS ESL + + +E+ Y L + L+ FI
Sbjct: 664 --------DKFTPNNYVNLYKTNILDKWIISEIESLKQILNEEIDKYNLTKSIEVLLTFI 715
Query: 474 DNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHL 533
D L NWY+R +RRR D A +L L ++ ++AP+ PFL E +YQNL+
Sbjct: 716 DKLNNWYIRRSRRRFWKSENDNDKIDAYETLYYTLKNLMLMLAPFIPFLTEEIYQNLK-- 773
Query: 534 TGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVI 593
T + SIH PQ + +I+ E+E + + V+ + R +R I I+ P++ +I
Sbjct: 774 TKNEKESIHLNNYPQSIKELINIELEEKMNFTRKVITIARALRASHNIKIRKPIKTIYII 833
Query: 594 HNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPIT 653
+ + +R + IL+E+N + + +++++ V+ +A+ + K LG++L T K +
Sbjct: 834 TKNHKEQNTLREMTEIILEEINAKEIKIKSNEEEL-VTYKAKANFKELGSKLGTNMKSVA 892
Query: 654 QAI 656
AI
Sbjct: 893 LAI 895
>sp|Q9PL20|SYI_CHLMU Isoleucine--tRNA ligase OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=ileS PE=3 SV=1
Length = 1036
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/668 (39%), Positives = 379/668 (56%), Gaps = 49/668 (7%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVT--SAFRVLTDTYVTEESGT 59
Q L F E Y+ + G +L G +Y PLFPYF+ AFRV+ ++ E GT
Sbjct: 257 QESLARWFPDRESYKWIGQLSGESLVGRRYCPLFPYFQDQQDRGAFRVIPADFIEESEGT 316
Query: 60 GVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIK 119
GVVH AP FGE D+ C V +VCPVD GCFT+ V+ F+G Y+K ADK I +
Sbjct: 317 GVVHMAPAFGEADFFACQEHNV-----PLVCPVDNQGCFTSEVTDFVGEYIKFADKGIAR 371
Query: 120 HLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEF 179
LK +++L G+++H YPFCWR+D+PLIYKAV SWF+ V+ + +LK N +W P
Sbjct: 372 RLKNENKLFYQGTIRHRYPFCWRTDSPLIYKAVNSWFVSVEKVKHKMLKANESIHWTPGH 431
Query: 180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL 239
+K RFG WL ARDWAISRNRYWGTPIP+W S+DG E++ + SI EL LSG + DL
Sbjct: 432 IKHGRFGKWLEGARDWAISRNRYWGTPIPIWRSEDG-ELLVIRSIQELEELSGQKI-VDL 489
Query: 240 HRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFI 299
HR +D + I + GK R+P VFDCWF+SG+MPYAQ H+PF+ + + RFPADFI
Sbjct: 490 HRHFIDEIVIH--KNGK-SFHRIPYVFDCWFDSGAMPYAQNHYPFERAEETEARFPADFI 546
Query: 300 AEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPME---- 355
AEG+DQTRGWFYTL VI+ ALF Q F+N+I NG+VLA+DG KMSK NYP P +
Sbjct: 547 AEGLDQTRGWFYTLTVIAAALFDQPAFKNVIVNGIVLAEDGNKMSKRLNNYPSPKKIMDT 606
Query: 356 ---PPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKE 412
+ + N +V+ ++ + S V L V L L
Sbjct: 607 YGADALRLYLLNSVVVKAEDLRFSDKG--------VEAVLK-----------QVLLPLSN 647
Query: 413 KVLLANDAEEKLSFQYNEAEGSTNI----MDAWIISFSESLIEFVRKEMAAYRLYTVVPR 468
+ E F NE +T++ +D WI+S SL+ R+ MA Y L+ V
Sbjct: 648 ALAFYKTYAELYGFSPNE---TTDLELAEIDRWILSSLYSLVGKTRENMAQYDLHAAVSP 704
Query: 469 LVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQ 528
+ FI++LTNWY+R +RRR D + A +L +VL +++AP+ PF E +YQ
Sbjct: 705 FIDFIEDLTNWYIRRSRRRFWESEDSPDRRAAFATLYEVLMVFSKIIAPFIPFTAEDMYQ 764
Query: 529 NLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLR 588
LR T S+H P I ++E+ ++ ++ +V LG +R+ + ++ PL+
Sbjct: 765 QLRVETD--PESVHLCDFPHVVLEKILPDLEKKMQDIREIVALGHSLRKEHKLKVRQPLQ 822
Query: 589 EAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTA 648
++ + + + ++S I +ELNV+ V F ++ +Y +L +P+ ++LG R+
Sbjct: 823 HMYIV-GAKERMAALAQVDSLIGEELNVKEVHFCSETPEYVTTL-VKPNFRSLGKRVGNR 880
Query: 649 FKPITQAI 656
I +A+
Sbjct: 881 LPEIQKAL 888
>sp|A1R0Q9|SYI_BORT9 Isoleucine--tRNA ligase OS=Borrelia turicatae (strain 91E135)
GN=ileS PE=3 SV=1
Length = 1044
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/657 (38%), Positives = 379/657 (57%), Gaps = 39/657 (5%)
Query: 4 RLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGV 61
RL +K E+ Y +++ F+G +KG++Y+P+F YF + AF++ T YVT + GTG+
Sbjct: 262 RLNHYYKDEKAYTVIEQFKGEYIKGIEYEPIFNYFLNQRDKGAFKIHTAEYVTTDDGTGI 321
Query: 62 VHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHL 121
VH AP FGE+DY + L T +++ P+DA FT V F GL+VKDAD II+ L
Sbjct: 322 VHIAP-FGEEDYNI-LKNNTKT---DMITPIDAECRFTNEVKDFEGLFVKDADNKIIEKL 376
Query: 122 KEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVK 181
K + L + H YPFC+R+++PLIY+ + SWF+ ++ + + L+K N W+P +K
Sbjct: 377 KSMNLLFKRENFLHRYPFCYRTNSPLIYRPISSWFVNIEAIKEKLIKSNEQINWMPSHLK 436
Query: 182 EKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHR 241
+ RFG WL ARDWAISRNR+WG PIP+W+ +C+GS EL RLSG V DLH+
Sbjct: 437 KGRFGKWLENARDWAISRNRFWGNPIPVWICSKTGNKICIGSKEELERLSGQKV-NDLHK 495
Query: 242 ESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+ VD +T PS G R EV DCWFESGSMPYA H+PF ++ +F + FPADFIAE
Sbjct: 496 DKVDKITWPSEYGG--VYVRTSEVLDCWFESGSMPYASKHYPFKDKDNFHNIFPADFIAE 553
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
G+DQTRGWFYTL ++ TALF+ F+N+I NGLVL+ DG+KMSKS RNY DPME
Sbjct: 554 GLDQTRGWFYTLTILGTALFENTAFKNVIVNGLVLSSDGRKMSKSLRNYTDPME-VINTF 612
Query: 362 IANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEK 413
A+ L V+ +D K S D ++ + + +W + I+
Sbjct: 613 GADALRLYLVMSPVIRADDLKYS------DDGVKDVLKNIIIPIWNAYSFFITYAII--- 663
Query: 414 VLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFI 473
+K N TNI+D WI+S ESL + + +E+ Y L + L+ FI
Sbjct: 664 --------DKFEPNNNINLHKTNILDKWIVSEIESLKKILNEEIDKYNLTKSIEELLAFI 715
Query: 474 DNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHL 533
D L NWY+R +RRR D A +L V+ ++ ++AP+ PFL E +YQNL+
Sbjct: 716 DKLNNWYIRRSRRRFWKSENDNDKIDAHETLYYVIKNLMLMLAPFIPFLTEEIYQNLK-- 773
Query: 534 TGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVI 593
T + SIH PQ +I+ ++E + ++ VV + R +R I I+ P+ V+
Sbjct: 774 TKDEKESIHLNKYPQAIEKLINIDLEEKMNFIRKVVSIARALRASHNIKIRKPISTIYVV 833
Query: 594 HNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFK 650
D + Q + ++ IL+E+N + + +++++ V+ +A+ + + LG++L K
Sbjct: 834 TKDQKEQQILNEMKEIILEEINAKEIKIKSNEEEL-VTYKAKANFRELGSKLGVNMK 889
>sp|Q65ZU1|SYI_BORGA Isoleucine--tRNA ligase OS=Borrelia garinii (strain PBi) GN=ileS
PE=3 SV=1
Length = 1042
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/665 (38%), Positives = 380/665 (57%), Gaps = 43/665 (6%)
Query: 4 RLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGV 61
++ + F E Y I++ F+GS L+G++Y+P+F YF + AF+V T Y+T + GTG+
Sbjct: 262 KINSYFDDENAYTIIEKFKGSQLQGIEYEPIFNYFLEQKDKGAFKVHTADYITTDDGTGI 321
Query: 62 VHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHL 121
VH AP FGE+DYRV + +I+ P+DA FT V F GL+VKDADK II++L
Sbjct: 322 VHIAP-FGEEDYRVLKKHTNV----DIIDPLDAECKFTNRVKDFKGLFVKDADKKIIENL 376
Query: 122 KEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVK 181
K ++ L + H YPFC+R++ P+IY+ + SWF+ V+ + LL+ N W+P +K
Sbjct: 377 KLRNFLFKRENYLHRYPFCYRTNYPIIYRPISSWFVNVEKIKTQLLEVNEKINWMPAHLK 436
Query: 182 EKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHR 241
+ RFG WL A+DWAISRNR+WG PIP+W+ + +CVGS EL LSG +E DLH+
Sbjct: 437 KGRFGKWLENAKDWAISRNRFWGNPIPIWICSKTGKKICVGSRKELEELSGQKIE-DLHK 495
Query: 242 ESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+ +D +T PS G R EV DCWFESG+MPYA H+PF N +F + FPADFIAE
Sbjct: 496 DKIDKITWPSKDGG--TFIRTSEVLDCWFESGAMPYASNHYPFANESNFKNIFPADFIAE 553
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
G+DQTRGWFYTL ++ T+LF+ F+N+I NGLVL+ DG+KMSKS +NY DPME
Sbjct: 554 GLDQTRGWFYTLTILGTSLFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPME-VINTF 612
Query: 362 IANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRL--CPVHVWEPVHVWSVCLILK 411
A+ L V+ +D K S + VR L + +W ++ I+
Sbjct: 613 GADALRLYLIMSPVVKADDLKYSDNG--------VRDVLKNIIIPIWNAYSFFTTYAII- 663
Query: 412 EKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVL 471
+K N + +N +D WIIS ESL + + KE+ Y L + L+
Sbjct: 664 ----------DKFKPTKNLSLVKSNNLDKWIISELESLKKILNKEIDKYNLTKSIESLLE 713
Query: 472 FIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLR 531
FID L NWY+R +RRR D A +L + T++ ++AP+ PF+ E +YQNL+
Sbjct: 714 FIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNLK 773
Query: 532 HLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAV 591
T ++SIH P+ N ID+ IE + + + + R +R I I+ P+
Sbjct: 774 --TDEDKQSIHLNDYPKANENFIDKTIEEKINLARKITSMARSLRSLHNIKIRMPISTIY 831
Query: 592 VIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKP 651
V+ + + ++ IL E+NV+ + +++++ ++ +A+ + K LG +L K
Sbjct: 832 VVTKNQNEQNMLIEMQEIILDEINVKEMKIKSNEEEL-ITYKAKANFKELGKKLGKDMKT 890
Query: 652 ITQAI 656
++ I
Sbjct: 891 VSIEI 895
>sp|O51773|SYI_BORBU Isoleucine--tRNA ligase OS=Borrelia burgdorferi (strain ATCC 35210
/ B31 / CIP 102532 / DSM 4680) GN=ileS PE=3 SV=1
Length = 1042
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/665 (37%), Positives = 377/665 (56%), Gaps = 43/665 (6%)
Query: 4 RLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGV 61
+L + + E Y I++ F+GS L+G++Y+P+F YF + AF+V T YVT + GTG+
Sbjct: 262 KLNSYYDDENSYTIIEKFKGSKLEGIEYEPIFNYFLEQKDKGAFKVHTADYVTTDDGTGI 321
Query: 62 VHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHL 121
VH AP FGE+DYR+ + +I+ P+DA FT V F GL+VKDADK II++L
Sbjct: 322 VHIAP-FGEEDYRILKKHTNV----DIIDPLDAECKFTNQVKDFKGLFVKDADKKIIENL 376
Query: 122 KEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVK 181
K ++ L + H YPFC+R++ P+IY+ + SWF+ V+ + LL+ N W+P +K
Sbjct: 377 KLRNFLFKRENYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLK 436
Query: 182 EKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHR 241
+ RFG WL A+DWAISRNR+WG PIP+W+ + +C+GS EL LSG +E DLH+
Sbjct: 437 KGRFGKWLENAKDWAISRNRFWGNPIPIWICSKTGKKICIGSKKELENLSGQKIE-DLHK 495
Query: 242 ESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+ +D +T PS GK R EV DCWFESG+MPYA H+PF N +F + FPADFIAE
Sbjct: 496 DQIDKITWPSKDGGK--FIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAE 553
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
G+DQTRGWFYTL ++ TALF+ F+N+I NGLVL+ DG+KMSKS +NY DPM+
Sbjct: 554 GLDQTRGWFYTLTILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQ-VINTF 612
Query: 362 IANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRL--CPVHVWEPVHVWSVCLILK 411
A+ L V+ +D K S + VR L + +W ++ I+
Sbjct: 613 GADALRLYLIMSPVVKADDLKYSDNG--------VRDVLKNIIIPIWNAYSFFTTYAII- 663
Query: 412 EKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVL 471
+K N + N +D WIIS ESL + + E+ Y L + L+
Sbjct: 664 ----------DKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLE 713
Query: 472 FIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLR 531
FID L NWY+R +RRR D A +L + T++ ++AP+ PF+ E +YQNL+
Sbjct: 714 FIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNLK 773
Query: 532 HLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAV 591
T ++SIH P+ N I++ IE + + + + R +R I I+ P+
Sbjct: 774 --TDEDKQSIHLNDYPKANENFINKTIEEKINLARKITSMARSLRSLHNIKIRMPISTIY 831
Query: 592 VIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKP 651
++ + + ++ IL E+N + + ++++ ++ +A+ + K LG +L K
Sbjct: 832 IVTKNQNEQNMLMEMQEIILDEINAKEMKIKANEEEL-ITYKAKANFKELGKKLGKDMKA 890
Query: 652 ITQAI 656
++ I
Sbjct: 891 VSTEI 895
>sp|B7J0S6|SYI_BORBZ Isoleucine--tRNA ligase OS=Borrelia burgdorferi (strain ZS7)
GN=ileS PE=3 SV=1
Length = 1042
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/665 (37%), Positives = 377/665 (56%), Gaps = 43/665 (6%)
Query: 4 RLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGV 61
+L + + E Y I++ F+GS L+G++Y+P+F YF + AF+V T YVT + GTG+
Sbjct: 262 KLNSYYDDENSYTIIEKFKGSKLEGIEYEPIFNYFLEQKDKGAFKVHTADYVTTDDGTGI 321
Query: 62 VHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHL 121
VH AP FGE+DY++ + +I+ P+DA FT V F GL+VKDADK II++L
Sbjct: 322 VHIAP-FGEEDYKILKKHTNV----DIIDPLDAECKFTNQVKDFKGLFVKDADKKIIENL 376
Query: 122 KEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVK 181
K ++ L + H YPFC+R++ P+IY+ + SWF+ V+ + LL+ N W+P +K
Sbjct: 377 KLRNFLFKRENYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLK 436
Query: 182 EKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHR 241
+ RFG WL A+DWAISRNR+WG PIP+W+ + +C+GS EL LSG +E DLH+
Sbjct: 437 KGRFGKWLENAKDWAISRNRFWGNPIPIWICSKTGKKICIGSKKELENLSGQKIE-DLHK 495
Query: 242 ESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+ +D +T PS GK R EV DCWFESG+MPYA H+PF N +F + FPADFIAE
Sbjct: 496 DQIDKITWPSKDGGK--FIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAE 553
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
G+DQTRGWFYTL ++ TALF+ F+N+I NGLVL+ DG+KMSKS +NY DPM+
Sbjct: 554 GLDQTRGWFYTLTILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQ-VINTF 612
Query: 362 IANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRL--CPVHVWEPVHVWSVCLILK 411
A+ L V+ +D K S + VR L + +W ++ I+
Sbjct: 613 GADALRLYLIMSPVVKADDLKYSDNG--------VRDVLKNIIIPIWNAYSFFTTYAII- 663
Query: 412 EKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVL 471
+K N + N +D WIIS ESL + + E+ Y L + L+
Sbjct: 664 ----------DKFKPPKNISLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLE 713
Query: 472 FIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLR 531
FID L NWY+R +RRR D A +L + T++ ++AP+ PF+ E +YQNL+
Sbjct: 714 FIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNLK 773
Query: 532 HLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAV 591
T ++SIH P+ N I++ IE + + + + R +R I I+ P+
Sbjct: 774 --TDEDKQSIHLNDYPKANENFINKTIEEKINLARKITSMARSLRSLHNIKIRMPISTIY 831
Query: 592 VIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKP 651
++ + + ++ IL E+N + + ++++ ++ +A+ + K LG +L K
Sbjct: 832 IVTKNQNEQNMLMEMQEIILDEINAKEMKIKANEEEL-ITYKAKANFKELGKKLGKDMKA 890
Query: 652 ITQAI 656
++ I
Sbjct: 891 VSAEI 895
>sp|Q0SM18|SYI_BORAP Isoleucine--tRNA ligase OS=Borrelia afzelii (strain PKo) GN=ileS
PE=3 SV=1
Length = 1042
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/665 (37%), Positives = 375/665 (56%), Gaps = 43/665 (6%)
Query: 4 RLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYF--KHVTSAFRVLTDTYVTEESGTGV 61
+L++ + E Y I++ F+GS L+G++Y+P+F YF + AF+V YVT + GTG+
Sbjct: 262 KLDSYYDDENSYTIIEKFKGSKLEGIEYEPIFNYFLEQKDKGAFKVHMADYVTTDDGTGI 321
Query: 62 VHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHL 121
VH AP FGE+DYR+ + +I+ P+DA FT V F GL+VKDADK II++L
Sbjct: 322 VHIAP-FGEEDYRILKKHTNV----DIIDPLDAECKFTNRVKDFQGLFVKDADKKIIENL 376
Query: 122 KEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVK 181
K ++ L + H YPFC+R++ P+IY+ + SWF+ V+ + LL+ N W+P +K
Sbjct: 377 KLRNFLFKRENYLHRYPFCYRTNYPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLK 436
Query: 182 EKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHR 241
+ RFG WL A+DWAISRNR+WG PIP+W+ + +CVGS EL LSG +E DLH+
Sbjct: 437 KGRFGKWLENAKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELESLSGQKIE-DLHK 495
Query: 242 ESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+ VD +T PS G R EV DCWFESG+MPYA H+PF N +F + FPADFIAE
Sbjct: 496 DKVDKITWPSKDGG--TFIRTSEVLDCWFESGAMPYASNHYPFTNESNFKNIFPADFIAE 553
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
G+DQTRGWFYTL ++ +LF+ F+N+I NGLVL+ DG+KMSKS +NY DPME
Sbjct: 554 GLDQTRGWFYTLTILGVSLFESTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPME-VINTF 612
Query: 362 IANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRL--CPVHVWEPVHVWSVCLILK 411
A+ L V+ +D K S + VR L + +W ++ I+
Sbjct: 613 GADALRLYLIMSPVVKADDLKYSDNG--------VRDVLKNIIIPIWNAYSFFTTYAII- 663
Query: 412 EKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVL 471
+K N N +D WIIS ESL + + E+ Y L + L+
Sbjct: 664 ----------DKFQPPKNLNLVKNNNLDKWIISELESLKKILNNEIDKYNLTKSIESLLE 713
Query: 472 FIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLR 531
FID L NWY+R +RRR D A +L + T++ ++AP+ PF+ E +YQNL+
Sbjct: 714 FIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNLK 773
Query: 532 HLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAV 591
T ++SIH P+ N +I++ IE + + + + R +R I I+ P+
Sbjct: 774 --TDEDKQSIHLNDYPKANENLINKTIEEKINLARKITSMARSLRSLHNIKIRMPISMIY 831
Query: 592 VIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKP 651
++ + + ++ IL E+N + + ++++ ++ +A+ + K LG +L K
Sbjct: 832 IVTKNQNEQNMLIEMQEIILDEINAKEMKIKSNEEDL-ITYKAKANFKELGKKLGKDMKT 890
Query: 652 ITQAI 656
++ I
Sbjct: 891 VSIEI 895
>sp|B2S348|SYI_TREPS Isoleucine--tRNA ligase OS=Treponema pallidum subsp. pallidum
(strain SS14) GN=ileS PE=3 SV=1
Length = 1091
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/686 (36%), Positives = 363/686 (52%), Gaps = 57/686 (8%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPY------------FKHVTSAFRVLT 49
+SRLE + Y ++ +G L G++Y+PLF Y F
Sbjct: 281 RSRLEFYYPDSSAYRVVWEKRGEHLAGIRYRPLFSYPVFGQGPDPSVQGDSEEGLFCTRV 340
Query: 50 DTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLY 109
+V+ E GTGVVH AP FGEDDY V G+ I CP+DA FTA V+ + GL+
Sbjct: 341 ADFVSTEDGTGVVHVAPAFGEDDYEVFKDAGI-----SIQCPLDAECRFTAEVADYQGLF 395
Query: 110 VKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKC 169
VK ADK II +++Q L + H+YP CWR +PLIY+AV SWF+ V+ + +L
Sbjct: 396 VKAADKAIIARVQKQGALFRREQISHAYPHCWRCASPLIYRAVHSWFVAVEKIKDKMLAA 455
Query: 170 NSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHR 229
N+ W P +++ RFG WL ARDWAISR+RYWG P+P+W C+GS +L+
Sbjct: 456 NASICWQPSHIRDGRFGKWLVCARDWAISRDRYWGNPLPIWRCVHCGATDCIGSRTQLYE 515
Query: 230 LSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRD 289
SG+ +E DLH+ VD VTIP +RRVPEV DCWFESG+MPYAQ H+PF++ D
Sbjct: 516 RSGMLLE-DLHKHVVDMVTIPCA--CGSVMRRVPEVLDCWFESGAMPYAQQHYPFEHATD 572
Query: 290 FDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRN 349
F+ FPA FI+EG+DQTRGWFYTL +++ ALF++ F N I GLVLA DG+KMSK+ RN
Sbjct: 573 FERYFPAHFISEGLDQTRGWFYTLTILAVALFERPAFENCIVTGLVLASDGKKMSKALRN 632
Query: 350 YPDPME-------PPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVH 402
Y DP E + + V+ +D K S + D + + + +W
Sbjct: 633 YADPNEVMDRYGADALRLFLVRSAVVRADDLKY--SDEGVKDIL----KTVIIPLWNSYS 686
Query: 403 VW-----------SVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIE 451
+ VC KV A +L+ N N +D WI+S +E L++
Sbjct: 687 FYVTYANIDGIDPPVC----AKVDGMGQAVTRLATHLN------NPLDRWILSLTEKLVQ 736
Query: 452 FVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTM 511
+ + AY + V +V ++D L NWY+R +RRR D + A N+L VL
Sbjct: 737 DIACALDAYDVSKVADPIVSYVDQLNNWYIRRSRRRFWKSINDEDKRCAYNTLYCVLKRC 796
Query: 512 VRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVEL 571
V +AP PF+ E ++QN+R +S+H P + D +E ++ +Q VV +
Sbjct: 797 VLAIAPVVPFITESIWQNIR--AADDVQSVHLADYPVCTPMVRDDALEFKMETVQRVVSM 854
Query: 572 GRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVS 631
R IR + + ++ PL+ VI + + +E +L ELNV+ + F +K+ V
Sbjct: 855 ARAIRAQCNLKVRQPLKAMQVITRNPMERSALLEMEEDVLDELNVKELVFH-EKEDEIVE 913
Query: 632 LRAEPDHKTLGARLKTAFKPITQAIK 657
RA+ + + LG L + K +I+
Sbjct: 914 YRAKANFRVLGKELGSKTKRAALSIE 939
>sp|O83466|SYI_TREPA Isoleucine--tRNA ligase OS=Treponema pallidum (strain Nichols)
GN=ileS PE=3 SV=1
Length = 1091
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/686 (36%), Positives = 363/686 (52%), Gaps = 57/686 (8%)
Query: 2 QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPY------------FKHVTSAFRVLT 49
+SRLE + Y ++ +G L G++Y+PLF Y F
Sbjct: 281 RSRLEFYYPDSSAYRVVWEKRGEHLAGIRYRPLFSYPVFGQGPDPSVQGDSEEGLFCTRV 340
Query: 50 DTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLY 109
+V+ E GTGVVH AP FGEDDY V G+ I CP+DA FTA V+ + GL+
Sbjct: 341 ADFVSTEDGTGVVHVAPAFGEDDYEVFKDAGI-----SIQCPLDAECRFTAEVADYQGLF 395
Query: 110 VKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKC 169
VK ADK II +++Q L + H+YP CWR +PLIY+AV SWF+ V+ + +L
Sbjct: 396 VKAADKAIIARVQKQGALFRREQISHAYPHCWRCASPLIYRAVHSWFVAVEKIKDKMLAA 455
Query: 170 NSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHR 229
N+ W P +++ RFG WL ARDWAISR+RYWG P+P+W C+GS +L+
Sbjct: 456 NASICWQPSHIRDGRFGKWLVCARDWAISRDRYWGNPLPIWRCVHCGATDCIGSRTQLYE 515
Query: 230 LSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRD 289
SG+ +E DLH+ VD VTIP +RRVPEV DCWFESG+MPYAQ H+PF++ D
Sbjct: 516 RSGMLLE-DLHKHVVDMVTIPCA--CGSVMRRVPEVLDCWFESGAMPYAQQHYPFEHATD 572
Query: 290 FDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRN 349
F+ FPA FI+EG+DQTRGWFYTL +++ ALF++ F N I GLVLA DG+KMSK+ RN
Sbjct: 573 FERYFPAHFISEGLDQTRGWFYTLTILAVALFERPAFENCIVTGLVLASDGKKMSKALRN 632
Query: 350 YPDPME-------PPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVH 402
Y DP E + + V+ +D K S + D + + + +W
Sbjct: 633 YADPNEVMDRYGADALRLFLVRSAVVRADDLKY--SDEGVKDIL----KTVIIPLWNSYS 686
Query: 403 VW-----------SVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIE 451
+ VC KV A +L+ N N +D WI+S +E L++
Sbjct: 687 FYVTYANIDGIDPPVC----AKVDGMGQAVTRLATHLN------NPLDRWILSLTEKLVQ 736
Query: 452 FVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTM 511
+ + AY + V +V ++D L NWY+R +RRR D + A N+L VL
Sbjct: 737 DIACALDAYDVSKVADPIVSYVDQLNNWYIRRSRRRFWKSINDEDKRCAYNTLYCVLKRC 796
Query: 512 VRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVEL 571
V +AP PF+ E ++QN+R +S+H P + D +E ++ +Q VV +
Sbjct: 797 VLAIAPVVPFITESIWQNIR--AADDVQSVHLADYPVCTPMVRDDALEFKMETVQRVVSM 854
Query: 572 GRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVS 631
R IR + + ++ PL+ VI + + +E +L ELNV+ + F +K+ V
Sbjct: 855 ARAIRAQCNLKVRQPLKAMQVITRNPMERSALLEMEEDVLDELNVKELVFH-EKEDEIVE 913
Query: 632 LRAEPDHKTLGARLKTAFKPITQAIK 657
RA+ + + LG L + K +I+
Sbjct: 914 YRAKANFRVLGKELGSKTKRAALSIE 939
>sp|Q8KFL5|SYI_CHLTE Isoleucine--tRNA ligase OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=ileS PE=3 SV=1
Length = 1084
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 251/708 (35%), Positives = 378/708 (53%), Gaps = 92/708 (12%)
Query: 2 QSRLETLFKK---EEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESG 58
+SRL L +K E +E++D +GS L+G Y+PLF YF A+ V+ +V+ G
Sbjct: 266 ESRLSVLVEKIGDESAWEVIDRCKGSDLEGRDYEPLFNYFSPERRAWYVVCGDFVSTGEG 325
Query: 59 TGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPII 118
TG+VH AP FG DDY + + ++ PV +GCFTA V + G++ KDADKPI+
Sbjct: 326 TGIVHIAPAFGADDYELSKQYQL-----PMLQPVARNGCFTAEVPDYEGMFFKDADKPIM 380
Query: 119 KHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPE 178
+ LKE+ +L +++H+YPF WR D P+IY A SW+IR + ++ N W P
Sbjct: 381 QRLKEEGKLYRRETIQHTYPFSWRYDVPVIYYARESWYIRTTDIAPRMVALNKTINWNPP 440
Query: 179 FVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSD--------DGEEIVCVGSIAELHR- 229
+ RFGNWL E +DWA+SR R+WGTP+P+WV++ D ++ VGS+AEL
Sbjct: 441 EIGTGRFGNWLEENKDWALSRERFWGTPLPVWVAEDFAIGDGPDSGKLFAVGSVAELREG 500
Query: 230 --------------LSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSM 275
L VE DLH+ VD + +R GK R PE+ D WF+SGSM
Sbjct: 501 FIEIDGEEMNLGDALDKGLVELDLHKPFVDRIWF--IRDGK-RFNRTPELIDVWFDSGSM 557
Query: 276 PYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLV 335
P+AQLH+PF+N+ FD FPADFIAEG+DQTRGWFYTL I+T +F + +RN++ NG +
Sbjct: 558 PFAQLHYPFENKELFDKTFPADFIAEGVDQTRGWFYTLHAIATLIFDRPAYRNVVVNGHI 617
Query: 336 LAQDGQKMSKSKRNYPDPME------------------PPFKNLIANGLVLSSDGQKMSK 377
L + GQKMSKSK N DP E PP++ + N + + +K +
Sbjct: 618 LDKSGQKMSKSKGNVVDPFESMEQYGADAIRWYLMITSPPWRPKLFNAAEIEEEQRKFFR 677
Query: 378 SKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNEAE---GS 434
+ N + VL AN F+Y EA+
Sbjct: 678 AFINSYNFF---------------------------VLYANVD----GFRYEEADIPFTQ 706
Query: 435 TNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLV--LFIDNLTNWYVRMNRRRL-KGE 491
+ +D W++S +LI V M Y L T RL+ +D+L+NWY+R +R+R KGE
Sbjct: 707 RSELDRWVLSSLNTLIAEVTSRMEQYDL-TGACRLIGDFTVDDLSNWYIRRSRKRFWKGE 765
Query: 492 GGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLE-RSIHFIMMPQPN 550
GP D A +L+ VL T+ ++MAP+ PF+ E ++ +L+ + G + S+H P +
Sbjct: 766 MGP-DKLSAYQTLSTVLETLAKLMAPFVPFIAEKIWLDLKSVGGTSKAESVHLADWPVAD 824
Query: 551 RGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYI 610
ID +E +K+ Q + L R +RE+ I ++ PLR ++ + + I
Sbjct: 825 ESCIDAALEERMKKAQIITSLVRTMREKAGIKVRQPLRRILLAAAEPGSRAAYELVSDII 884
Query: 611 LQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIKV 658
+E+NV+ + + D+ +S +A+P+ KTLG R K + + I++
Sbjct: 885 KEEVNVQKIEYVEDEDGSVISKKAKPNFKTLGPRFGKDMKLLAEEIRI 932
>sp|Q1RIY1|SYI_RICBR Isoleucine--tRNA ligase OS=Rickettsia bellii (strain RML369-C)
GN=ileS PE=3 SV=1
Length = 1108
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 249/681 (36%), Positives = 368/681 (54%), Gaps = 60/681 (8%)
Query: 6 ETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQA 65
E K +E++ I+ +GS L+GL Y+PLF YFK+ ++F++ +V E GTGVVH A
Sbjct: 323 ELELKGDEQFTII---KGSELQGLSYKPLFDYFKNHPNSFKIFAGDFVVEGDGTGVVHMA 379
Query: 66 PYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQS 125
P FGEDD +C + G+ ++VCPVD SG FT + GL V DA+ II LKEQ
Sbjct: 380 PGFGEDDQILCESKGI-----KLVCPVDNSGKFTKEIPDLEGLQVFDANDKIIIKLKEQG 434
Query: 126 RLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRF 185
+ H+YP CWR+DTPLIYKAVPSW+++V +++ N W+P VK+ F
Sbjct: 435 NWLKTEQYIHNYPHCWRTDTPLIYKAVPSWYVKVTEFKDRMVELNQQINWIPTHVKDNLF 494
Query: 186 GNWLREARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRES 243
G WL ARDW+ISRNR+WGTP+P+W SDD + I GSI EL + G+ + DLHR
Sbjct: 495 GKWLENARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEELEKDFGVKI-TDLHRPF 553
Query: 244 VDSVT--IPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+D +T P GK +RR+ +VFDCWFESGSMPY Q H+PF+N++ F++ FPADFI E
Sbjct: 554 IDELTRANPDDPTGKSTMRRIEDVFDCWFESGSMPYGQAHYPFENKQWFEEHFPADFIVE 613
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
QTRGWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F
Sbjct: 614 YSAQTRGWFYTLMVLSTALFDRPPFLNCICHGVILDATGQKLSKRLNNYADPLE-LFDKY 672
Query: 362 IANGL---VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEK 413
++ L +LSS+ GQ++ K K D + RL +W H +++
Sbjct: 673 GSDALRVTMLSSNVVKGQELLIDKDGKMVFDTL----RLFIKPIWNAYHFFTM------- 721
Query: 414 VLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFI 473
+ A+ + +L+F S N++D +I+S + +E +++ + ++ T + F
Sbjct: 722 YVNADHIKGELNFT------SENVLDVYILSKLKIAVEKIKESLDSFDTGTAYHAVSEFF 775
Query: 474 DNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNL--- 530
+ L NWY+R +R R AD + A N+L L TM M+ P + E +Y L
Sbjct: 776 EVLNNWYIRRSRARFWKSEKDADKQSAYNTLYTCLETMAIAMSSLVPLISEAIYLGLYCH 835
Query: 531 --------------RHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIR 576
L G S+H P ++ I+ E+ ++ + + IR
Sbjct: 836 PRKSGDPEKPECLDSRLCGNDNLSVHLCDYPDLSKFKINSELVDTMDTVLDICSHSLFIR 895
Query: 577 ERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEP 636
++ PL +I + ++++ E I E+NV++V + D + Y V +
Sbjct: 896 SSENARVRQPLSSITIISKNN---DKLKSFEDLIKDEINVKSVIYRDDLENYAVK-KLSI 951
Query: 637 DHKTLGARLKTAFKPITQAIK 657
+ LG RL K I A K
Sbjct: 952 NFPLLGKRLPAKMKDIIAASK 972
>sp|A8GW18|SYI_RICB8 Isoleucine--tRNA ligase OS=Rickettsia bellii (strain OSU 85-389)
GN=ileS PE=3 SV=1
Length = 1108
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 249/681 (36%), Positives = 364/681 (53%), Gaps = 60/681 (8%)
Query: 6 ETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQA 65
E K +E++ I+ +GS L+GL Y+PLF YFK+ ++F++ +V E GTGVVH A
Sbjct: 323 ELELKGDEQFTII---KGSELQGLSYKPLFDYFKNHPNSFKIFAGDFVVEGDGTGVVHMA 379
Query: 66 PYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQS 125
P FGEDD +C + G+ ++VCPVD SG FT + GL V DA+ II LKEQ
Sbjct: 380 PGFGEDDQILCESKGI-----KLVCPVDNSGKFTKEIPDLEGLQVFDANDKIIIKLKEQG 434
Query: 126 RLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRF 185
+ H+YP CWR+DTPLIYKAVPSW+++V +++ N W+P VK+ F
Sbjct: 435 NWLKTEQYIHNYPHCWRTDTPLIYKAVPSWYVKVTEFKDRMVELNQQINWIPTHVKDNLF 494
Query: 186 GNWLREARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRES 243
G WL ARDW+ISRNR+WGTP+P+W SDD + I GSI EL + G+ + DLHR
Sbjct: 495 GKWLENARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEELEKDFGVKI-TDLHRPF 553
Query: 244 VDSVT--IPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+D +T P GK +RR+ +VFDCWFESGSMPY Q H+PF+N++ F++ FPADFI E
Sbjct: 554 IDELTRANPDDPTGKSTMRRIEDVFDCWFESGSMPYGQAHYPFENKQWFEEHFPADFIVE 613
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
QTRGWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F
Sbjct: 614 YSAQTRGWFYTLMVLSTALFDRPPFLNCICHGVILDATGQKLSKRLNNYADPLE-LFDKY 672
Query: 362 IANGL---VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEK 413
++ L +LSS+ GQ++ K K D + RL +W H ++
Sbjct: 673 GSDALRVTMLSSNVVKGQELLIDKDGKMVFDTL----RLFIKPIWNAYHFFT-------- 720
Query: 414 VLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFI 473
+ AN K + S N++D +I+S + +E +++ + ++ T + F
Sbjct: 721 -MYANADHIKGELNFT----SENVLDVYILSKLKIAVEKIKESLDSFDTGTAYHAVSEFF 775
Query: 474 DNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNL--- 530
+ L NWY+R +R R AD + A N+L L TM M+ P + E +Y L
Sbjct: 776 EVLNNWYIRRSRARFWKSEKDADKQSAYNTLYTCLETMAIAMSSLVPLISEAIYLGLYCH 835
Query: 531 --------------RHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIR 576
L G S+H P ++ I+ E+ ++ + + IR
Sbjct: 836 PRKSGDPEKPECLDSRLCGNDNLSVHLCDYPDLSKFKINSELVDTMDTVLDICNHSLFIR 895
Query: 577 ERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEP 636
++ PL +I + ++++ E I E+NV++V + D + Y V +
Sbjct: 896 SSENARVRQPLSSITIISKNN---DKLKSFEDLIKDEINVKSVIYRDDLENYAVK-KLSI 951
Query: 637 DHKTLGARLKTAFKPITQAIK 657
+ LG RL K I A K
Sbjct: 952 NFPLLGKRLPAKMKDIIAASK 972
>sp|C4V8Q1|SYIC_NOSCE Probable isoleucine--tRNA ligase, cytoplasmic OS=Nosema ceranae
(strain BRL01) GN=NCER_100885 PE=3 SV=1
Length = 1046
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/669 (37%), Positives = 361/669 (53%), Gaps = 92/669 (13%)
Query: 21 FQGSTLKGLQYQPLFPYFKHV--TSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLA 78
F+G L GL+Y+ F YF+ F+++ ++V+ GTG+VH AP FGEDDY +
Sbjct: 276 FKGELLIGLEYEQPFNYFEEYRRCGFFKIIGGSFVSSTDGTGIVHAAPAFGEDDYNCFVE 335
Query: 79 GGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYP 138
+I ++ + CPVD +G FTA V + G+YVKDADK IIKHLKE ++ + H+YP
Sbjct: 336 NNLIKQNDLVPCPVDENGKFTAEVFDYKGIYVKDADKLIIKHLKE--KIFCVKQISHNYP 393
Query: 139 FCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAIS 198
FCWRS+ PLIY+ V SWFI+V L+K N WVP+ +K K+FG WL A+DWA S
Sbjct: 394 FCWRSEKPLIYRLVSSWFIKVSDSVDKLIKNNEIINWVPKDIKHKKFGKWLSNAKDWAFS 453
Query: 199 RNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRPGKPP 258
R+R+WGTPIPLWVSDD EI+CV S EL +LSG + DLH E +D + + + GK
Sbjct: 454 RSRFWGTPIPLWVSDDYSEILCVESAEELEKLSGKKI-TDLHMEFIDDIIL--TKNGK-T 509
Query: 259 LRRVPEVFDCWFESGSMPYAQLHFPF---DN------RRDFDD-------------RFPA 296
LRR+PEVFDCWFESG MPYAQ +PF DN R F D FPA
Sbjct: 510 LRRIPEVFDCWFESGCMPYAQHSWPFRKVDNLNCEEIRHHFHDSDNTLVYENKILENFPA 569
Query: 297 DFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEP 356
DFI EGIDQTRGWFYTL VIST LF + F+N+I NG+VLA++G+KMSK +NYPDP
Sbjct: 570 DFIGEGIDQTRGWFYTLHVISTLLFDKPAFKNVIVNGIVLAENGKKMSKKDKNYPDP-NI 628
Query: 357 PFKNLIANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCL 408
K A+ L V+ +D + D ++ +L + W L
Sbjct: 629 VMKTFGADSLRMYLISSPVVEADNLLFKE------DGVKDVSKLLIIP-------WMNVL 675
Query: 409 ILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPR 468
L + EKL +D WI + V M Y+L V
Sbjct: 676 KFYTTSLQKRNDCEKLE------------LDNWINYTFNEFLSSVSNYMNNYQLSKVCGL 723
Query: 469 LVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVR----VMAPYTPFLCE 524
F+DNL+NWY+R++R ++ TK+LF +++ +M+P+ PF E
Sbjct: 724 AYKFLDNLSNWYLRIHREEIRSGN------------TKILFNILKKFSVIMSPFAPFFSE 771
Query: 525 HLYQNL----RHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVT 580
+ +Q L ++ S+HF M P+ + S + + +++ R +R++ T
Sbjct: 772 YSFQCLLSSQQNEKSNSINSVHFQMYPEAQ-----DSGDNSFENAKDIIDAIRYLRDKHT 826
Query: 581 IPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQ--KYGVSLRAEPDH 638
I +K PL+E +I +D +++ + I++E +V + F + + + + +A+P
Sbjct: 827 ISLKTPLKEVKII-SDELFMKDAAKFSNTIIRECHVFNLIFVKESEVPELKIEYKAKPCF 885
Query: 639 KTLGARLKT 647
+ L LKT
Sbjct: 886 EYLKKDLKT 894
>sp|Q92H19|SYI_RICCN Isoleucine--tRNA ligase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=ileS PE=3 SV=2
Length = 1092
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/699 (36%), Positives = 368/699 (52%), Gaps = 86/699 (12%)
Query: 12 EEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGED 71
EE +EI+ +GS L+GL Y+ LF YF++ ++F++ +V E GTGVVH AP FGED
Sbjct: 288 EENFEII---KGSALQGLNYKSLFDYFENHPNSFKIFAGDFVVEGDGTGVVHMAPGFGED 344
Query: 72 DYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAG 131
D +C + G+ E+VCPVD SG FT + GL V DA+ II LKEQ +
Sbjct: 345 DQILCESKGI-----ELVCPVDNSGKFTKEIPDLEGLQVFDANDKIIIKLKEQGNWLKTE 399
Query: 132 SVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLRE 191
H+YP CWR+DTPLIYKAVPSW+++V +++ N W+P VK+ FG WL
Sbjct: 400 QYIHNYPHCWRTDTPLIYKAVPSWYVKVTQFKDRMVELNQQINWIPFHVKDNLFGKWLEN 459
Query: 192 ARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSVTI 249
ARDW+ISRNR+WGTP+P+W SDD + I GSI EL + G+ V DLHR +D +T
Sbjct: 460 ARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEELEKDFGVKV-TDLHRPFIDELTR 518
Query: 250 PSVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTR 307
P+ GK +RR+ +VFDCWFESGSMPY Q H+PF+N+ F+D FPADFI E QTR
Sbjct: 519 PNPDDPTGKSTMRRIEDVFDCWFESGSMPYGQAHYPFENKEWFEDHFPADFIVEYSAQTR 578
Query: 308 GWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGL- 366
GWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F ++ L
Sbjct: 579 GWFYTLMVLSTALFDRPPFLNCICHGVILDSTGQKLSKRLNNYADPLE-LFDKYGSDALR 637
Query: 367 --VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLAND 419
+LSS+ GQ++ K K D + RL +W H +++ A+
Sbjct: 638 VTMLSSNVVKGQELLIDKDGKMVFDTL----RLFIKPIWNAYHFFTM-------YANADS 686
Query: 420 AEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNW 479
+ KL+F S N++D +I+S + ++ + + + + T + F + L NW
Sbjct: 687 LKGKLNF------SSKNVLDVYILSKLKIAVQKIEESLDNFDTQTAYHAVSAFFEVLNNW 740
Query: 480 YVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH------- 532
Y+R +R R D + A N+L L TM M+ P + E +Y+ LRH
Sbjct: 741 YIRRSRARFWKSAKDTDKQNAYNTLYSCLDTMAIAMSALVPMISEAIYKGLRHCEERNDT 800
Query: 533 -LTGR----------LER---------------------SIHFIMMPQPNRGIIDQEIER 560
L+G+ L++ S+H P + I+ E+
Sbjct: 801 ALSGKSNIIARKDTSLDKAISGVSHKIATALSVPRNDAISVHLCNYPTLSDFEINHELVA 860
Query: 561 SVKRMQSVVELGRVIRERVTIPIKYPLREAVVI--HNDAQCLQEIRTLESYILQELNVRT 618
++ + + IR I ++ PL +I HN+ ++ E I E+NV+
Sbjct: 861 TMDNVLDICSNSLFIRSTENIRVRQPLASIAIISKHNN-----NLKDFEDLIKDEINVKA 915
Query: 619 VTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIK 657
V + D + Y S + + LG RL K I A K
Sbjct: 916 VIYRDDLENYA-SKKLSINFPMLGKRLPHKMKEIIAASK 953
>sp|A8GPA1|SYI_RICAH Isoleucine--tRNA ligase OS=Rickettsia akari (strain Hartford)
GN=ileS PE=3 SV=1
Length = 1103
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 252/695 (36%), Positives = 368/695 (52%), Gaps = 82/695 (11%)
Query: 12 EEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGED 71
EE +EI+ +GS L+GL+Y+PLF YF+H ++F++ +V E GTGVVH AP FGED
Sbjct: 303 EENFEII---KGSQLQGLRYKPLFDYFEHHPNSFKIFDVDFVVEGDGTGVVHMAPGFGED 359
Query: 72 DYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAG 131
D +C + G+ +VCPVD SG FT + G+ V DA+ II LKEQ +
Sbjct: 360 DQILCESKGI-----SLVCPVDNSGKFTKEIPDLEGVQVFDANDKIIIKLKEQGNWLKTE 414
Query: 132 SVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLRE 191
H+YP CWR+DTPLIYKAVPSW+++V +++ N W+P VK+ FG WL
Sbjct: 415 QYIHNYPHCWRTDTPLIYKAVPSWYVKVTQFKDRMVELNQQINWIPHHVKDNLFGKWLEN 474
Query: 192 ARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSVTI 249
ARDW+ISRNR+WGTP+P+W SDD + I GSI EL + G+ V DLHR +D +T
Sbjct: 475 ARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEELEKDFGVKV-TDLHRPFIDKLTR 533
Query: 250 PSVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTR 307
P+ GK +RR+ +VFDCWFESGSMPY Q H+PF+N+ F+D FPADFI E QTR
Sbjct: 534 PNPNDPTGKSTMRRIEDVFDCWFESGSMPYGQAHYPFENKEWFEDHFPADFIVEYSAQTR 593
Query: 308 GWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGL- 366
GWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F ++ L
Sbjct: 594 GWFYTLMVLSTALFDRPPFLNCICHGVILDATGQKLSKRLNNYADPLE-LFDQYGSDALR 652
Query: 367 --VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLAND 419
+LSS+ GQ++ K K D + RL +W H +++ A+
Sbjct: 653 VTMLSSNIVKGQELLIDKDGKMVFDTL----RLFIKPIWSSYHFFTM-------YANADS 701
Query: 420 AEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNW 479
+ ++SF S N++D +I+S + + + + + + T ++ F + L NW
Sbjct: 702 LKGEISF------ASENVLDVYILSKLKIAVSKIEESLDNFDTQTAYHAVLEFFEVLNNW 755
Query: 480 YVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH------L 533
Y+R +R R D + A N+L L TM M+ P + E +Y+ L H L
Sbjct: 756 YIRRSRARFWKSEKDTDKQNAYNTLYSCLKTMAIAMSALVPMISEAIYKGLCHCEETSTL 815
Query: 534 TGR-----------------------------LERSIHFIMMPQPNRGIIDQEIERSVKR 564
+ R + S+H P + I+ E+ ++
Sbjct: 816 SSRDLIAGSSKSINNLNPVVKPRDYTPSVHHNDQISVHLCNYPTLSDFEINHELVATMDN 875
Query: 565 MQSVVELGRVIRERVTIPIKYPLREAVVI--HNDAQCLQEIRTLESYILQELNVRTVTFS 622
+ + IR I ++ PL +I HN+ +++ E+ I E+NV++V +
Sbjct: 876 VLDICSNSLFIRSTKNIRVRQPLASITIISKHNN-----DLKAFENLIKDEINVKSVIYC 930
Query: 623 TDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIK 657
D + Y S + + LG RL K I A K
Sbjct: 931 DDLENYA-SKKLSINFPMLGKRLPAKMKEIIAASK 964
>sp|C4K2T0|SYI_RICPU Isoleucine--tRNA ligase OS=Rickettsia peacockii (strain Rustic)
GN=ileS PE=3 SV=1
Length = 1092
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 255/699 (36%), Positives = 369/699 (52%), Gaps = 86/699 (12%)
Query: 12 EEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGED 71
EE +EI+ +GS L+GL Y+ LF YF++ ++F++ +V E GTGVVH AP FGED
Sbjct: 288 EENFEII---KGSELQGLHYKSLFDYFENHPNSFKIFAGDFVVEGDGTGVVHMAPGFGED 344
Query: 72 DYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAG 131
D +C + G+ E+VCPVD SG FT + + GL V DA+ II LKEQ +
Sbjct: 345 DQILCESKGI-----ELVCPVDNSGKFTKEIPNLEGLQVFDANDKIIIKLKEQGNWLKTE 399
Query: 132 SVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLRE 191
H+YP CWR+DTPLIYKAVPSW+++V +++ N W+P VK+ FG WL
Sbjct: 400 QYIHNYPHCWRTDTPLIYKAVPSWYVKVTQFKDRMVELNQQINWIPFHVKDNLFGKWLEN 459
Query: 192 ARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSVTI 249
ARDW+ISRNR+WGTP+P+W SDD + I GSI EL + G+ V DLHR +D +T
Sbjct: 460 ARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEELEKDFGVKV-TDLHRPFIDELTR 518
Query: 250 PSVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTR 307
P+ GK +RR+ +VFDCWFESGSMPY Q H+PF+N+ F+D FPADFI E QTR
Sbjct: 519 PNPDDPTGKSTMRRIEDVFDCWFESGSMPYGQAHYPFENKEWFEDHFPADFIVEYSAQTR 578
Query: 308 GWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGL- 366
GWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F ++ L
Sbjct: 579 GWFYTLMVLSTALFDRPPFLNCICHGVILDSTGQKLSKRLNNYADPLE-LFDKYGSDALR 637
Query: 367 --VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLAND 419
+LSS+ GQ++ K K D + RL +W H +++ A+
Sbjct: 638 VTMLSSNVVKGQELLIDKDGKMVFDTL----RLFIKPIWNAYHFFTM-------YANADS 686
Query: 420 AEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNW 479
+ KL+F S N++D +I+S + ++ + + + + T + F + L NW
Sbjct: 687 LKGKLNF------SSKNVLDVYILSKLKIAVQKIEESLDNFDTQTAYHAVSEFFEVLNNW 740
Query: 480 YVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH------- 532
Y+R +R R D + A N+L L TM M+ P + E +Y+ LRH
Sbjct: 741 YIRRSRARFWKSEKDTDKQNAYNTLYSCLDTMAIAMSALVPMISEAIYKGLRHCEERNDT 800
Query: 533 -LTGR----------LER---------------------SIHFIMMPQPNRGIIDQEIER 560
L+G+ L++ S+H P + I+ E+
Sbjct: 801 ALSGKSNVIARQDTSLDKAISGVSHKIATALSVPRNDAISVHLCNYPTLSDFEINHELVA 860
Query: 561 SVKRMQSVVELGRVIRERVTIPIKYPLREAVVI--HNDAQCLQEIRTLESYILQELNVRT 618
++ + + IR I ++ PL +I HN+ ++ E I E+NV+
Sbjct: 861 TMDNVLDICSNSLFIRSTENIRVRQPLASIAIISKHNN-----NLKDFEDLIKDEINVKA 915
Query: 619 VTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIK 657
V + D + Y S + + LG RL K I A K
Sbjct: 916 VIYRDDLENY-TSKKLSINFPMLGKRLPHKMKEIIVASK 953
>sp|Q4UMD8|SYI_RICFE Isoleucine--tRNA ligase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=ileS PE=3 SV=1
Length = 1094
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/690 (36%), Positives = 364/690 (52%), Gaps = 77/690 (11%)
Query: 12 EEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGED 71
EE +EI+ +GS L+GL Y+PLF YF + ++F++ +V E GTG+VH AP FGED
Sbjct: 299 EENFEII---KGSALQGLSYKPLFDYFANHPNSFKIFAGDFVVEGDGTGIVHMAPGFGED 355
Query: 72 DYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAG 131
D +C + G+ +VCPVD SG FT + G+ V DA+ II LKEQ +
Sbjct: 356 DQILCESKGI-----SLVCPVDNSGKFTKEIPDLEGVQVFDANDKIIIKLKEQGNWLKTE 410
Query: 132 SVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLRE 191
H+YP CWR+DTPLIYKAVPSW+++V +++ N W+P VK+ FG WL
Sbjct: 411 QYIHNYPHCWRTDTPLIYKAVPSWYVKVTQFKDRMVELNQQINWIPFHVKDNLFGKWLEN 470
Query: 192 ARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSVTI 249
ARDW+ISRNR+WGTP+P+W SDD + I GSI EL + G+ V DLHR +D +
Sbjct: 471 ARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEELEKDFGVKV-TDLHRPFIDELAR 529
Query: 250 PSVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTR 307
P+ GK +RR+ +VFDCWFESGSMPY Q H+PF+N++ F+D FPADFI E QTR
Sbjct: 530 PNPNDPTGKSTMRRIEDVFDCWFESGSMPYGQAHYPFENKKWFEDHFPADFIVEYSAQTR 589
Query: 308 GWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGL- 366
GWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F ++ L
Sbjct: 590 GWFYTLMVLSTALFDRPPFLNCICHGVILDATGQKLSKRLNNYADPLE-LFDKYGSDALR 648
Query: 367 --VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLAND 419
+LSS+ GQ++ K K D + RL +W H +++ A+
Sbjct: 649 VTMLSSNVVKGQELLIDKDGKMVFDTL----RLFIKPIWNAYHFFTM-------YANADS 697
Query: 420 AEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNW 479
+ +L+F S N++D +I+S + + + + + + T + F + L NW
Sbjct: 698 LKGELNF------ASQNVLDIYILSKLKIAVNKIEESLDNFDTQTAYHAVSEFFEVLNNW 751
Query: 480 YVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH------- 532
Y+R +R R AD + A N+L L TM M+ P + E +Y L H
Sbjct: 752 YIRRSRARFWKSEKDADKQNAYNTLYSCLETMAIAMSALVPMISEAIYLGLCHKRPDVIA 811
Query: 533 ---------LTGRLER--------------SIHFIMMPQPNRGIIDQEIERSVKRMQSVV 569
++G S+H P + I+ E+ ++ + +
Sbjct: 812 RKDLSLDEAISGNSHEIATALSVPRNDGSISVHLCNYPNLSSFEINHELVATMDNVLDIC 871
Query: 570 ELGRVIRERVTIPIKYPLREAVVI--HNDAQCLQEIRTLESYILQELNVRTVTFSTDKQK 627
IR I ++ PL +I HND ++++ E I E+NV++V + D +
Sbjct: 872 SNSLFIRSTENIRVRQPLATITIISKHND-----KLKSFEDLIKDEINVKSVIYRDDLEN 926
Query: 628 YGVSLRAEPDHKTLGARLKTAFKPITQAIK 657
Y S + + LG RL K I A K
Sbjct: 927 YA-SKKLSINFPMLGKRLPAKMKEIIAASK 955
>sp|A8EY49|SYI_RICCK Isoleucine--tRNA ligase OS=Rickettsia canadensis (strain McKiel)
GN=ileS PE=3 SV=1
Length = 1079
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/695 (35%), Positives = 370/695 (53%), Gaps = 76/695 (10%)
Query: 6 ETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQA 65
E K +E++ I+ +GS L+GL+Y+PLF YF++ ++F++ +V E GTGVVH A
Sbjct: 280 ELELKGDEQFTII---KGSELEGLRYKPLFNYFENHPNSFKIFACDFVVEGDGTGVVHMA 336
Query: 66 PYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQS 125
P FGEDD +C + G+ E+VCPVD SG FT + GL V DA+ II LKEQ
Sbjct: 337 PGFGEDDQILCESKGI-----ELVCPVDNSGKFTKEIPDLEGLQVFDANDKIIIKLKEQG 391
Query: 126 RLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRF 185
+ H+YP CWR+DTPLIYKAVPSW+++V + +++ N W+P VK+ F
Sbjct: 392 NWLKTEQYIHNYPHCWRTDTPLIYKAVPSWYVKVTNFKDRIVELNQQINWIPSHVKDNVF 451
Query: 186 GNWLREARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRES 243
G WL ARDW+ISRNR+WGTP+P+W SDD + I GSI EL + G+ V DLHR
Sbjct: 452 GKWLENARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEELEKDFGVKV-TDLHRPF 510
Query: 244 VDSVT--IPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAE 301
+D +T P GK +RR+ +VFDCWFESGSMPY+Q H+PF+N++ F+D FPADFI E
Sbjct: 511 IDELTRANPDDPTGKSTMRRIEDVFDCWFESGSMPYSQAHYPFENKKWFEDHFPADFIVE 570
Query: 302 GIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNL 361
+ QTRGWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F
Sbjct: 571 YVAQTRGWFYTLMVLSTALFDRPPFLNCICHGVILDTTGQKLSKRLNNYADPLE-LFDKY 629
Query: 362 IANGL---VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEK 413
++ L +LSS+ GQ++ K K D + RL +W H +++
Sbjct: 630 GSDALRITMLSSNVVKGQELLIDKDGKMVFDTL----RLFIKPIWNAYHFFTM------- 678
Query: 414 VLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFI 473
A+ + K F S N++D +I+S + ++ + K + + ++ F
Sbjct: 679 YANADSLKGKSDF------ASENVLDIYILSKLKIAVQKIEKSLDNFDTQAAYHQVSEFF 732
Query: 474 DNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH- 532
+ L NWY+R +R R AD + A N+L L TM M+ P + E +Y L +
Sbjct: 733 EVLNNWYIRRSRARFWKSEKDADKQNAYNTLYSCLETMAIAMSALVPMISEAIYLGLHNT 792
Query: 533 --------LTG--------------------RLERSIHFIMMPQPNRGIIDQEIERSVKR 564
++G S+H P+ + ++ E+ ++
Sbjct: 793 VIPQLDYGISGDKPGAQDPIIKSQDGIRGCRNDNLSVHLCNYPKLSNFEVNHELVATMDT 852
Query: 565 MQSVVELGRVIRERVTIPIKYPLREAVVI--HNDAQCLQEIRTLESYILQELNVRTVTFS 622
+ + IR + ++ PL +I HND +++ E I E+NV+ + +
Sbjct: 853 VLDICSNSLFIRSNENVRVRQPLASITIISKHND-----KLKDFEDLIKDEINVKAIIYR 907
Query: 623 TDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIK 657
D + Y + + + LG RL K I A K
Sbjct: 908 DDLENYATT-KLSLNFPMLGKRLPYKMKEIIAASK 941
>sp|C3PP60|SYI_RICAE Isoleucine--tRNA ligase OS=Rickettsia africae (strain ESF-5)
GN=ileS PE=3 SV=1
Length = 1092
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/699 (36%), Positives = 365/699 (52%), Gaps = 86/699 (12%)
Query: 12 EEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGED 71
EE +EI+ +GS L+GL Y+ LF YF++ ++F++ +V E GTGVVH AP FGED
Sbjct: 288 EENFEII---KGSALQGLNYKSLFDYFENHPNSFKIFAGDFVVEGDGTGVVHMAPGFGED 344
Query: 72 DYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAG 131
D +C + G+ E+VCPVD SG FT + GL V DA+ II LKEQ +
Sbjct: 345 DQILCESKGI-----ELVCPVDNSGKFTKEIPDLEGLQVFDANDKIIIKLKEQGNWLKTE 399
Query: 132 SVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLRE 191
H+YP CWR+DTPLIYKAVPSW+++V +++ N W+P VK+ FG WL
Sbjct: 400 QYIHNYPHCWRTDTPLIYKAVPSWYVKVTQFKDRMVELNQQINWIPFHVKDNLFGKWLEN 459
Query: 192 ARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSVTI 249
ARDW+ISRNR+WGTP+P+W SDD + I GSI EL + G+ V DLHR +D +T
Sbjct: 460 ARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEELEKDFGVKV-TDLHRPFIDELTR 518
Query: 250 PSVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTR 307
P+ GK +RR+ +VFDCWFESGSMPY Q H+PF+N+ F+D FPADFI E QTR
Sbjct: 519 PNPDDPTGKSTMRRIEDVFDCWFESGSMPYGQAHYPFENKEWFEDHFPADFIVEYSAQTR 578
Query: 308 GWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGL- 366
GWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F ++ L
Sbjct: 579 GWFYTLMVLSTALFDRPPFLNCICHGIILDSTGQKLSKRLNNYADPLE-LFDKYGSDALR 637
Query: 367 --VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLAND 419
+LSS+ GQ++ K K D + RL +W H ++ + AN
Sbjct: 638 VTMLSSNVVKGQELLIDKDGKMVFDTL----RLFIKPIWNAYHFFT---------MYANT 684
Query: 420 AEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNW 479
K ++ S N++D +I+S + ++ + + + + T + F + L NW
Sbjct: 685 DSLKGKLNFS----SKNVLDVYILSKLKIAVQKIEESLDNFDTQTAYHAVSEFFEVLNNW 740
Query: 480 YVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH------- 532
Y+R +R R D + A N+L L TM M+ P + E +Y+ L H
Sbjct: 741 YIRRSRARFWKSEKDTDKQNAYNTLYSCLDTMAIAMSALVPMISEAIYKGLHHCEERNDT 800
Query: 533 -LTGR----------LER---------------------SIHFIMMPQPNRGIIDQEIER 560
L+G+ L++ S+H P + I+ E+
Sbjct: 801 ALSGKSNVIVRKDTSLDKAISGVSHKIATALSVPCNDAISVHLCNYPTLSDFEINHELVA 860
Query: 561 SVKRMQSVVELGRVIRERVTIPIKYPLREAVVI--HNDAQCLQEIRTLESYILQELNVRT 618
++ + + IR I ++ PL +I HN+ ++ E I E+NV+
Sbjct: 861 TMDNVLDICSNSLFIRSTENIRVRQPLASIAIISKHNN-----NLKDFEDLIKDEINVKA 915
Query: 619 VTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIK 657
V + D + Y S + + LG RL K I A K
Sbjct: 916 VIYRDDLENYA-SKKLSINFPMLGKRLPHKMKEIIAASK 953
>sp|Q899C3|SYI_CLOTE Isoleucine--tRNA ligase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=ileS PE=3 SV=2
Length = 1036
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/641 (38%), Positives = 341/641 (53%), Gaps = 46/641 (7%)
Query: 14 EYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDY 73
EYEI+ F+G + GLQY+ L P++ AFRV+ +VT GTG+VH AP +GEDD
Sbjct: 268 EYEIIKEFKGEDILGLQYEQLLPFYTPEEEAFRVIHGDFVTLSDGTGIVHTAPAYGEDDN 327
Query: 74 RVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSV 133
VC G+ ++ VD G F V + G+ VK AD II+++ E+ L +
Sbjct: 328 IVCKKHGL-----PMINLVDKEGKFIDCVEPWKGMPVKKADSKIIEYMDEKGILYKSEKF 382
Query: 134 KHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREAR 193
HSYP CWR DT L+Y SWF+R+ + LL+ N+ W P+ ++ RFG +L
Sbjct: 383 THSYPHCWRCDTALLYYPTDSWFVRMTSLRDKLLENNNKVNWYPDNIRTGRFGKFLENVI 442
Query: 194 DWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKD--LHRESVDSVTIPS 251
DW ISR+RYWGTP+P+W + G C+GSI+EL + GI V +D LH+ +D V +
Sbjct: 443 DWGISRDRYWGTPLPIWECECGHR-ECIGSISEL-KEKGIDVPEDIELHKPYIDKVKLKC 500
Query: 252 VRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFY 311
+ GK ++R EV DCWF+SGSMP+AQ H+PF+N+ F+ FPA FI+E +DQTRGWFY
Sbjct: 501 SKCGKE-MKRTREVIDCWFDSGSMPFAQHHYPFENKEVFEKTFPAQFISEAVDQTRGWFY 559
Query: 312 TLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSSD 371
TL ISTA+F PF N I G VL + G KMSKSK N DP + VL S
Sbjct: 560 TLTAISTAIFDTNPFENCIVLGHVLDKHGLKMSKSKGNVVDPFD-----------VLDSA 608
Query: 372 GQKMSKSKKNYPDPMEVRGRLCPVHVWEPVH-----VWSVCLILKEKVLLANDAEEKLSF 426
G S+ + R P V E +W+V +L D ++
Sbjct: 609 GADASRWHFYTASAPWLPTRFSPEDVEETQRKFLSTLWNVYSFY----VLYADIDKFNPL 664
Query: 427 QYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRR 486
+Y + S N+MD WI+S SLI+ V M +YR+ + F+D L+NWYVR NR
Sbjct: 665 EYKDF-VSENVMDKWIVSKLNSLIKDVEDHMDSYRITQAALAIEDFVDELSNWYVRRNRS 723
Query: 487 RLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNL-RHLTGRLERSIHFIM 545
R E D A +L KVL T+ + AP+ PF+ E +Y NL R L SIH
Sbjct: 724 RFWSEELREDKIGAYVTLYKVLTTVSLIAAPFVPFITEEIYNNLVRGLDKNALESIHLCN 783
Query: 546 MPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRT 605
P+ + +I +E+ER + +V+LGR R V I + PL +V I+T
Sbjct: 784 WPKYDENLIQKELEREMDEAYKIVKLGRSARNSVNIKNRQPLSSMLV---------SIKT 834
Query: 606 LESY----ILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLG 642
L Y I ELN++ + F D Y V +P+ LG
Sbjct: 835 LPEYYGRIIKDELNIKDIIFGADLSSY-VEFNIKPNLPVLG 874
>sp|Q9ZCU4|SYI_RICPR Isoleucine--tRNA ligase OS=Rickettsia prowazekii (strain Madrid E)
GN=ileS PE=3 SV=1
Length = 1086
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/682 (36%), Positives = 359/682 (52%), Gaps = 69/682 (10%)
Query: 12 EEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGED 71
+E +EI+ +G L+GL Y+PLF YF++ ++F++ +V E GTG+VH AP FGED
Sbjct: 299 KENFEII---KGLKLQGLSYKPLFNYFENHPNSFKIFASDFVVEGDGTGIVHMAPGFGED 355
Query: 72 DYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAG 131
D +C + G+ E+VCPVD SG FT + G+ V DA+ II LKEQ +
Sbjct: 356 DQILCESKGI-----ELVCPVDNSGKFTKEIPDLEGVQVFDANDKIIIKLKEQGNWIKTE 410
Query: 132 SVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLRE 191
H+YP CWR+DTPLIYKAVPSW++RV +++ N W+P VK+ FG WL
Sbjct: 411 QYIHNYPHCWRTDTPLIYKAVPSWYVRVTKFKDRMVELNQQINWIPHNVKDNLFGKWLEN 470
Query: 192 ARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSV-- 247
ARDW+ISRNR+WGTP+P+W SDD + I GSI E+ + G+ + DLHR +D +
Sbjct: 471 ARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEEIEKDFGVKI-NDLHRPFIDELTR 529
Query: 248 TIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTR 307
T P GK +RR+ +VFDCWFESGSMPY Q+H+PF+N++ F + FPADFI E QTR
Sbjct: 530 TNPDDPTGKSTMRRIDDVFDCWFESGSMPYGQVHYPFENKKWFVEHFPADFIVEYSSQTR 589
Query: 308 GWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGL- 366
GWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F ++ L
Sbjct: 590 GWFYTLMVLSTALFDRPPFLNCICHGVILDATGQKLSKRLNNYADPLE-LFDKYGSDALR 648
Query: 367 --VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLAND 419
+LSS+ GQ++ K K D + RL +W H +++ AN
Sbjct: 649 VTMLSSNVVKGQELLIDKDGKMVFDTL----RLFIKPIWNAYHFFTI---------YANA 695
Query: 420 AEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNW 479
K + + S N++D +I+S + + + + + + T + F + L NW
Sbjct: 696 DSLKGTLNF----ASQNVLDVYILSKLKIAVNKIEESLDNFDTQTAYHAVSEFFEVLNNW 751
Query: 480 YVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNL--------- 530
Y+R +R R D + A N+L L M M+ P + E +YQ L
Sbjct: 752 YIRRSRARFWKNEKDTDKQNAYNTLYSCLKIMTIAMSALIPMISETIYQGLHNTAITQLN 811
Query: 531 ------RHL-------TGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRE 577
+H+ T S+H P + I+ E+ ++ + + IR
Sbjct: 812 CLLSEGKHIVQNPMSDTQDYNTSVHLCNYPTLSDFEINYELVSTMDNVLDICSNSLFIRS 871
Query: 578 RVTIPIKYPLREAVVI--HNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAE 635
I ++ PL +I HN+ ++ E I E+NV+TV + D + Y +
Sbjct: 872 TENIRVRQPLACITIISKHNN-----NLKDFEDLIKDEINVKTVIYRDDLENYARK-KLS 925
Query: 636 PDHKTLGARLKTAFKPITQAIK 657
+ LG RL K I A K
Sbjct: 926 LNFAILGKRLPHKMKAIIDAAK 947
>sp|Q68WC2|SYI_RICTY Isoleucine--tRNA ligase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=ileS PE=3 SV=1
Length = 1086
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/682 (36%), Positives = 360/682 (52%), Gaps = 69/682 (10%)
Query: 12 EEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGED 71
+E +EI+ +G L+GL Y+PLF YF++ ++F++ +V E GTG+VH AP FGED
Sbjct: 299 KENFEII---KGLKLQGLSYKPLFNYFENHPNSFKIFASNFVVEGEGTGIVHMAPGFGED 355
Query: 72 DYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAG 131
D +C + G+ E+VCPVD SG FT + G+ V DA+ II LKEQ +
Sbjct: 356 DQILCESKGI-----ELVCPVDNSGKFTKEIPDLEGVQVFDANDKIIIKLKEQGNWIKTE 410
Query: 132 SVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLRE 191
H+YP CWR+DTPLIYKAVPSW++RV +++ N W+P VK+ FG WL
Sbjct: 411 QYIHNYPHCWRTDTPLIYKAVPSWYVRVTQFKDRMVELNQQINWIPHNVKDNLFGKWLEN 470
Query: 192 ARDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSV-- 247
ARDW+ISRNR+WGTP+P+W SDD + I GSI E+ + G+ + DLHR +D +
Sbjct: 471 ARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEEIEQDFGVKI-NDLHRPFIDELTR 529
Query: 248 TIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTR 307
T P GK +RR+ +VFDCWFESGSMPY Q H+PF+N++ F + FPADFI E QTR
Sbjct: 530 TNPDDPTGKSIMRRIDDVFDCWFESGSMPYGQAHYPFENKKWFVEHFPADFIVEYSSQTR 589
Query: 308 GWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGL- 366
GWFYTL+V+STALF + PF N I +G++L GQK+SK NY DP+E F ++ L
Sbjct: 590 GWFYTLIVLSTALFDRPPFLNCICHGVILDATGQKLSKRLNNYADPLE-LFDRYGSDALR 648
Query: 367 --VLSSD---GQKM--SKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLAND 419
+LSS+ GQ++ K K D + RL +W H +++ AN
Sbjct: 649 VTMLSSNVVKGQELLIDKDGKMIFDTL----RLFIKPIWNAYHFFTI---------YANA 695
Query: 420 AEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNW 479
K + + S N++D +I+S + + + + + + T + F + L NW
Sbjct: 696 DALKGTLNFT----SQNVLDIYILSKLKIAVNKIEESLDNFDTQTAYHAVSEFFEVLNNW 751
Query: 480 YVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRH------- 532
Y+R +R R + D + A N+L L TM M+ P + E +YQ L +
Sbjct: 752 YIRRSRARFWKKEKDTDKQNAYNTLYSCLETMTIAMSALVPMISEAIYQGLHNTAITQLN 811
Query: 533 ---LTGR------------LERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRE 577
L G+ S+H P + I+ E+ ++ + + IR
Sbjct: 812 CLLLEGKHVVQNPMSGTQDYNTSVHLCNYPTLSDFEINHELVSTMDNVLDICSNSLFIRS 871
Query: 578 RVTIPIKYPLREAVVI--HNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAE 635
I ++ PL +I HN+ ++ E I E+NV+TV + D + Y +
Sbjct: 872 TKNIRVRQPLACITIISKHNN-----NLKDFEDLIKDEINVKTVIYRDDLENYAHK-KLS 925
Query: 636 PDHKTLGARLKTAFKPITQAIK 657
+ LG RL K I A K
Sbjct: 926 LNFAILGKRLPHKMKAIIDASK 947
>sp|Q5GSS3|SYI_WOLTR Isoleucine--tRNA ligase OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=ileS PE=3 SV=1
Length = 1134
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/608 (37%), Positives = 322/608 (52%), Gaps = 54/608 (8%)
Query: 21 FQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGG 80
+ L GL Y+PLF YFK +AFRV YVT E GTGVVH AP FGE+D+ +C
Sbjct: 337 LKADDLAGLSYKPLFNYFKGTKNAFRVFIADYVTGEDGTGVVHTAPGFGEEDFYLCQ--- 393
Query: 81 VITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFC 140
+ D +CP+D SG FTA VS G++V D + IIK LKEQ H+YP C
Sbjct: 394 --SHDIPAICPIDNSGRFTAEVSDLTGIHVFDTNDAIIKKLKEQGNWFKTEQYIHNYPHC 451
Query: 141 WRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRN 200
WR+DTPLIY+A+PSW++ V + +++ N W+P +++ +FG WL A DW+ISRN
Sbjct: 452 WRTDTPLIYRAMPSWYVAVTKFKERMIELNKRVNWIPTHIRDGQFGKWLERAHDWSISRN 511
Query: 201 RYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVR--PGK 256
R+WGTPIP+W SD+ + GSIAEL R + V DLHR +DS+T P+ GK
Sbjct: 512 RFWGTPIPIWKSDNARYPRVDVYGSIAELERDFNVKV-NDLHRPFIDSLTRPNPDDPTGK 570
Query: 257 PPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVI 316
+RRVP+VFDCWFESGS+P+AQ+H+PF+N+ F+ FPADFI E I QTRGWFYTL V+
Sbjct: 571 SIMRRVPDVFDCWFESGSVPFAQVHYPFENKEWFESNFPADFITEYIAQTRGWFYTLFVL 630
Query: 317 STALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPME-------PPFKNLIANG---- 365
STALF PF+N I +G+VL GQK+SK NY DPME + L+ +G
Sbjct: 631 STALFDSEPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDKYGSDALRFLMLSGSIVC 690
Query: 366 ---LVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEE 422
L L+ +G + KN P +W H ++ + AN
Sbjct: 691 GGNLFLNKEGSSIRDVLKNVMKP-----------IWNSYHFFT---------MYANADGI 730
Query: 423 KLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVR 482
K + + +D+++I +E ++ M+ Y L+ F + L NWY+R
Sbjct: 731 KAEV----CKDYKSTIDSYMIFKCFEAVESIQASMSNYNSQEACKILIDFFEVLNNWYIR 786
Query: 483 MNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIH 542
+R R D A N L V + ++R P P + E ++Q L++ E S+H
Sbjct: 787 RSRERFWKSNLDQDKTDAYNVLYTVFYYILRAAVPLLPLITETIWQGLKY----KEISVH 842
Query: 543 FIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQE 602
PQ R D E+ + ++ + IR I ++ PL V H + E
Sbjct: 843 LADFPQLER--YDSELIAKMDLVREICNSALSIRNTFNIRVRQPLGSMTVYHQSSCSFLE 900
Query: 603 IRTLESYI 610
+ L I
Sbjct: 901 SKPLSVVI 908
>sp|A5N3P1|SYI_CLOK5 Isoleucine--tRNA ligase OS=Clostridium kluyveri (strain ATCC 8527 /
DSM 555 / NCIMB 10680) GN=ileS PE=3 SV=1
Length = 1034
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/667 (36%), Positives = 353/667 (52%), Gaps = 58/667 (8%)
Query: 8 LFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPY 67
L K E EYE++ F+G + G++Y+P+F + A V+ YVT GTG+VH AP
Sbjct: 260 LEKLEGEYEVVKKFKGEEMLGIEYEPMFNFTPFEGKAHYVVHGDYVTLTDGTGIVHTAPA 319
Query: 68 FGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRL 127
FGEDD C+ + ++ V G F V+ + GL+VKDAD II +LKE+ L
Sbjct: 320 FGEDDSITCIKHNI-----PMINSVTTQGKFKDEVTPWKGLFVKDADPKIIAYLKEKDIL 374
Query: 128 VSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGN 187
A HSYPFCWR DT L+Y +WFIR+ M L++ +DT W P+ ++ RFG
Sbjct: 375 YKAEKFTHSYPFCWRCDTTLLYYPRDTWFIRMSAMRDKLIRNTNDTNWYPDNIRTGRFGK 434
Query: 188 WLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKD--LHRESVD 245
++ DW +SR RYWGTP+P+W + G C+GSI EL R GI+V D LH+ +D
Sbjct: 435 FVEGVIDWGLSRERYWGTPLPIWECECGHR-ECIGSIKEL-REKGINVPDDIELHKPYID 492
Query: 246 SVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQ 305
V + + K + RVPEV DCWF+SGSMP+AQ H+PF+NR F+ FPA FI+E +DQ
Sbjct: 493 GVKLKCDKCHK-EMERVPEVIDCWFDSGSMPFAQHHYPFENRELFEKNFPAQFISEAVDQ 551
Query: 306 TRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANG 365
TRGWFYTL+ IST LF ++ F N + G VL + G KMSK K N P
Sbjct: 552 TRGWFYTLMAISTVLFDKSSFENCLVLGHVLDKHGLKMSKHKGNVLSPE----------- 600
Query: 366 LVLSSDGQKMSK-----------SKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKV 414
+VL ++G ++ + Y + ++ R +W +V+S
Sbjct: 601 VVLENEGADATRWYFYTESAPWLPSRFYEEAVQDSQRKFLGTLW---NVYSF-------Y 650
Query: 415 LLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFID 474
+L D ++ +Y+ S N+MD W+IS SLI+ + YR+ + F+D
Sbjct: 651 VLYADLDKFNPLEYSHFV-SENVMDKWVISRLNSLIKITEGNLDNYRITQAAESIGNFVD 709
Query: 475 NLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNL-RHL 533
L+NWYVR NR R E D A +L VL + + AP+ PF+ E +YQNL L
Sbjct: 710 ELSNWYVRRNRTRFWNEELAEDKVGAYVTLYNVLNKLCLIAAPFVPFMTEEIYQNLVLSL 769
Query: 534 TGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVI 593
+ SIH P+ + ++D ++E++++ +V+LGR R I + PL E ++
Sbjct: 770 NKNVPESIHLCKWPEYDLNLVDSDLEKNMEECYKIVKLGRSARNAANIKNRQPLSEMLI- 828
Query: 594 HNDAQCLQEIRTLESY----ILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAF 649
++TL Y I ELN++ + F+ D KY V+ +P+ LG +
Sbjct: 829 --------SVKTLPGYYGDIIKSELNIKNIVFNADLSKY-VNFNIKPNLPVLGKKYGRMI 879
Query: 650 KPITQAI 656
I Q+I
Sbjct: 880 PKIKQSI 886
>sp|Q73HW7|SYI_WOLPM Isoleucine--tRNA ligase OS=Wolbachia pipientis wMel GN=ileS PE=3
SV=1
Length = 1111
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/681 (34%), Positives = 350/681 (51%), Gaps = 84/681 (12%)
Query: 21 FQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGG 80
+ + L GL Y+PLF YFK +AFRV YVTEE GTGVVH AP FGE+D+ +C
Sbjct: 329 LKANDLAGLSYKPLFDYFKDTKNAFRVFIADYVTEEDGTGVVHTAPGFGEEDFYLCQ--- 385
Query: 81 VITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFC 140
+ D ++CP+D SG FTA VS G++V DA+ +IK LK Q H+YP C
Sbjct: 386 --SHDIPVICPIDNSGKFTAEVSDLAGVHVFDANDTVIKKLKGQGSWFKTEQYIHNYPHC 443
Query: 141 WRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRN 200
WR+DTPLIY+ +PSW++ V +++ N W+P +++ +FG WL A DW+ISRN
Sbjct: 444 WRTDTPLIYRTMPSWYVAVTKFKSRMVELNKRVNWIPNHIRDGQFGKWLEGAHDWSISRN 503
Query: 201 RYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSVT--IPSVRPGK 256
R+WGTPIP+W SDD + GSI EL R + ++ DLHR +D++T P GK
Sbjct: 504 RFWGTPIPVWKSDDARYPRVDVYGSIEELERDFNVKID-DLHRPFIDTLTRLNPDDPTGK 562
Query: 257 PPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVI 316
+RRVP+VFDCWFESGSMP+AQ+H+PF+N+ F+ ADFI E I QTRGWFYTL V+
Sbjct: 563 SVMRRVPDVFDCWFESGSMPFAQIHYPFENKEWFE---SADFITEYIAQTRGWFYTLFVL 619
Query: 317 STALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPME-------PPFKNLIANG---- 365
STALF + PF+N I +G+VL GQK+SK NY DPME + L+ +G
Sbjct: 620 STALFNREPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDRYGSDALRFLMLSGSIIC 679
Query: 366 ---LVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEE 422
L+L +G + KN P +W H +++ A+ +
Sbjct: 680 GGNLLLDKEGNSIRDVLKNVIKP-----------IWNSYHFFTM-------YANADGIKA 721
Query: 423 KLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVR 482
++ Y + +D ++IS +E ++ M +Y L+ F + L NWY+R
Sbjct: 722 EVCKDYQ------STIDRYMISKCFEAVESIQASMNSYSSQEACKILIDFFEVLNNWYIR 775
Query: 483 MNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIH 542
+R R D A N L V + ++R AP P + E+++Q L++ E S+H
Sbjct: 776 RSRERFWKSDLDQDKTDAYNVLYTVFYYILRAAAPLLPLITENIWQGLKY----EETSVH 831
Query: 543 FIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDA----- 597
PQ + D ++ + ++ V IR I I+ PL ++ H +
Sbjct: 832 LANFPQLEK--FDSQLIAKMDLVREVCNSALSIRNTFNIRIRQPLGSMIIYHQSSCSFLE 889
Query: 598 ---------------------QCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEP 636
QC + + I E+NV+++ ++ + SL +
Sbjct: 890 GEPLSVIPEFFPVIQVADTGIQCAADSNEYQEMIKDEVNVKSLEL-VNRLEGIASLELKL 948
Query: 637 DHKTLGARLKTAFKPITQAIK 657
+ LG R+ K + Q +K
Sbjct: 949 NFPLLGKRIPDKIKKLVQYVK 969
>sp|Q6NGD7|SYI_CORDI Isoleucine--tRNA ligase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=ileS PE=3 SV=1
Length = 1052
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/663 (37%), Positives = 353/663 (53%), Gaps = 64/663 (9%)
Query: 13 EEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDD 72
E++E+L GS L GL YQP+F YF +AF++L YVT E GTG+VHQAP FGEDD
Sbjct: 300 EDHEVLTVRPGSELVGLTYQPIFSYFADHENAFQILAAEYVTTEDGTGIVHQAPAFGEDD 359
Query: 73 YRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGS 132
C G+ E+V PVD G FT+ V + G V DA+K II LK R+V +
Sbjct: 360 MNTCKEYGI-----EVVIPVDMDGKFTSLVPEYQGQLVFDANKSIIADLKAAGRVVRHQT 414
Query: 133 VKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREA 192
++HSYP WRS PLIY A+PSWF+ V + +++ N + W+P +++ +FG WL A
Sbjct: 415 IEHSYPHSWRSGEPLIYMALPSWFVEVTKIRDRMVELNKEIDWMPSHIRDGQFGKWLEGA 474
Query: 193 RDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSVTIP 250
RDW ISRNRYWG+PIP+WVSDD + GS+ EL R G+ E LHR +D +T P
Sbjct: 475 RDWNISRNRYWGSPIPVWVSDDENYPRVDVYGSLEELERDFGVRPES-LHRPHIDELTRP 533
Query: 251 SVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRG 308
+ GK +RRVPEV DCWFESGSMP+AQ H+PF+N+ FD PADFI E QTRG
Sbjct: 534 NPDDPTGKSTMRRVPEVLDCWFESGSMPFAQKHYPFENKDWFDTHSPADFIVEYSGQTRG 593
Query: 309 WFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKN-------- 360
WFYTL V++TALF + F+ ++A+G+VL DG KMSKS+RNYPD E ++
Sbjct: 594 WFYTLHVLATALFDRPAFKKVVAHGIVLGDDGTKMSKSRRNYPDVNEVFNRDGSDAMRWF 653
Query: 361 ------LIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKV 414
L L+++ G + VR L P +W+ L+
Sbjct: 654 LMSSPILRGGNLIVTEQGIREG-----------VRQALLP--------MWNAYSFLQ--- 691
Query: 415 LLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFID 474
L + + S S++++D +I++ ++ V + + + F D
Sbjct: 692 -LYSSKPAQWSVD------SSDVLDRYILAKLHDVVAAVGDALDNTDIARACDEVRTFCD 744
Query: 475 NLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLT 534
LTNWYVR +R R G + A +L VL T+ RV AP P + E ++ R LT
Sbjct: 745 ALTNWYVRRSRDRFW--AGDTEHPEAFYTLYTVLETLTRVTAPLLPMVSEVIW---RGLT 799
Query: 535 GRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIH 594
G ERS+H PQ ++ D ++ R++ ++ V +R+ + + PL + V
Sbjct: 800 G--ERSVHLADFPQADQFPADDDLVRAMDEVRGVCSATSSVRKAHKLRNRLPLPKVTVAL 857
Query: 595 NDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQ 654
++ L + + I E+NV+ V ++D G + K G RL + +
Sbjct: 858 PESARLADFADI---IRDEVNVKEVALTSDVDSVG-RFDVVVNAKVAGPRLCKDVQRAIK 913
Query: 655 AIK 657
A+K
Sbjct: 914 AVK 916
>sp|Q8SQV6|SYIC_ENCCU Probable isoleucine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU11_1100 PE=3 SV=1
Length = 1017
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/647 (37%), Positives = 352/647 (54%), Gaps = 83/647 (12%)
Query: 17 ILDSFQGSTLKGLQYQPLFPYFKHV--TSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYR 74
IL G L+GL+Y+ F YF+ FRVL +VT+ GTGVVH AP FGE DY
Sbjct: 270 ILQRVSGRELEGLEYEQPFDYFEEYRKKGFFRVLASGFVTDTDGTGVVHCAPGFGECDYN 329
Query: 75 VCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVK 134
+ G+I + + CPVD +G +T+ V + G YVKD DK I+ +++ +++ +
Sbjct: 330 AFVEKGLIRENDLVPCPVDENGRYTSEVRRYAGRYVKDCDKAILSDIRD--KVLMNQRIV 387
Query: 135 HSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARD 194
H YPFCWRSDTPL+YK VP+WF++V+ LL+ N WVP +K KRF NWL ARD
Sbjct: 388 HKYPFCWRSDTPLLYKLVPNWFVKVKDHVDSLLRNNEKINWVPPDIKYKRFHNWLENARD 447
Query: 195 WAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRP 254
W+ISRNR+WGTPIPLWV++D +++C+GS+ EL LSG ++ D+HRE +D + I R
Sbjct: 448 WSISRNRFWGTPIPLWVTEDYSDMICIGSVGELEELSGRKID-DIHREFIDGIVIH--RN 504
Query: 255 GKPPLRRVPEVFDCWFESGSMPYAQLHFPF------------------DNRRDFDDRFPA 296
G+ RRV EV DCWFESGSMPYAQ H+PF N++ + FPA
Sbjct: 505 GR-EYRRVEEVLDCWFESGSMPYAQDHWPFCKESGVDLGSLSVSGGEERNKKLVKENFPA 563
Query: 297 DFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEP 356
FI EG+DQTRGWFYTL VIS+ LF Q F N++ NG+VLA+DG+KMSK RNYPDP
Sbjct: 564 HFIGEGLDQTRGWFYTLHVISSLLFGQPAFLNVVVNGIVLAEDGRKMSKRLRNYPDPSH- 622
Query: 357 PFKNLIANGL--------VLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCL 408
F A+ L V+ ++ K S+ V
Sbjct: 623 IFNTYGADSLRMYLISSPVVEAENLKFSEG--------------------------GVKE 656
Query: 409 ILKEKVL-LANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVP 467
+LK ++ N L + E +G + MD WI + ++ + ++M Y L +V+
Sbjct: 657 VLKTLIIPWYNSLGFYLENRDVEPDGRSLPMDGWITASFDNFAWSLTRKMRKYELSSVLT 716
Query: 468 RLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLY 527
+ FID+L+NWY+RM R+ ++ G A L ++L VM P+TPF E+ Y
Sbjct: 717 LALRFIDDLSNWYIRMYRKEIRA-GHHA-------VLGEILKKFSIVMGPFTPFFSEYSY 768
Query: 528 QNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPL 587
Q+L S+HF P G E+ + S++ R +RE +I +K PL
Sbjct: 769 QSLNP-----GESVHFQEYPVCKNGTHPFEMAK------SIIAAVRRLRETNSISLKTPL 817
Query: 588 REAVVIHNDAQCLQEIRTLESYILQELNVRTVTF-STDKQKYGVSLR 633
+ A ++ + + + I+ I E NV + + D+ + ++++
Sbjct: 818 KSATLM-SSSSLYEGIKDYIDAIKTECNVLELLYKEEDRSMFDITVK 863
>sp|Q5YYW9|SYI_NOCFA Isoleucine--tRNA ligase OS=Nocardia farcinica (strain IFM 10152)
GN=ileS PE=3 SV=1
Length = 1042
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/660 (37%), Positives = 349/660 (52%), Gaps = 57/660 (8%)
Query: 13 EEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDD 72
E+ +L F+G+ L GL Y+P F +F +A RVL YVT +SGTGVVH AP FGE+D
Sbjct: 292 EDATVLAEFEGAALVGLSYRPPFDFFLGHPNAHRVLAADYVTTDSGTGVVHMAPAFGEED 351
Query: 73 YRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGS 132
VC A D E+V P+D G FT+ V + GL V DA+ IIK LK +L+ +
Sbjct: 352 MEVCSA-----NDIELVQPLDPGGRFTSMVPPYEGLMVFDANPVIIKDLKAAGKLLRHET 406
Query: 133 VKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREA 192
++HSYP WRS PLIY AVPSWF+ V +++ N WVPE +++ +FG WL A
Sbjct: 407 IEHSYPHSWRSGQPLIYMAVPSWFVAVTKFRDRMVELNKQITWVPEHIRDGQFGKWLEGA 466
Query: 193 RDWAISRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSGISVEKDLHRESVDSVTIP 250
RDW ISRNRYWG+PIP+WVSDD + GS+ EL R G+ DLHR ++D +T P
Sbjct: 467 RDWNISRNRYWGSPIPVWVSDDPAYPRVDVYGSLEELERDFGVR-PTDLHRPAIDQLTRP 525
Query: 251 SVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRG 308
+ G+ +RRVPEV DCWFESGSMPYAQ+H+PF+N+ FD FP DFI E QTRG
Sbjct: 526 NPDDPTGRSMMRRVPEVLDCWFESGSMPYAQVHYPFENKEWFDSHFPGDFIVEYNGQTRG 585
Query: 309 WFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVL 368
WFYTL V++TALF F+ + A+G+VL DG KMSKSK NYPD E V
Sbjct: 586 WFYTLHVLATALFDSPAFKTVAAHGIVLGDDGLKMSKSKGNYPDVNE-----------VF 634
Query: 369 SSDGQKMSKSKKNYPDPMEVRGRLCPV---------HVWEPVHVWSVCLILKEKVLLAND 419
DG + P+ G L H P +W+ L+ L A+
Sbjct: 635 DRDGSDAMRWFL-MSSPILRGGNLIVTERGIREGVSHALRP--LWNAWTFLQ---LYASK 688
Query: 420 AEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNW 479
E + ST+++D +I++ + + + + Y + L F D LTNW
Sbjct: 689 PGEWRT-------DSTHVLDRYILAKLAQTRDGMTEALEVYDIAGACEELRTFADALTNW 741
Query: 480 YVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLER 539
YVR +R R E + A+++L VL R+ AP P + E ++ R LTG R
Sbjct: 742 YVRRSRSRFWSED-----RDAVDTLHTVLEVATRLAAPLLPLISEVIW---RGLTG--GR 791
Query: 540 SIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQC 599
S+H P D E+ ++ +++V +R+ + ++ PL E + DA+
Sbjct: 792 SVHLADWPAAADLPADPELVSTMDEVRTVCSTVLSLRKAKNLRVRLPLAEVTIAAPDAER 851
Query: 600 LQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIKVS 659
L + + E+NV+ V +TD +G + + G RL + + +A+K
Sbjct: 852 LAPYADI---VADEVNVKKVDLTTDVAVHG-RFELAVNARAAGPRLGKDVQRVIKAVKAG 907
>sp|Q6AFZ0|SYI_LEIXX Isoleucine--tRNA ligase OS=Leifsonia xyli subsp. xyli (strain
CTCB07) GN=ileS PE=3 SV=1
Length = 1119
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 245/669 (36%), Positives = 353/669 (52%), Gaps = 79/669 (11%)
Query: 23 GSTLKGLQYQPLFPYFKHVTS-----AFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCL 77
G L+G+ Y L+ Y+ + A+++L D YVT E GTG+VHQAP +GEDD RVC
Sbjct: 348 GRELEGVTYDRLWDYYADAATWGTQNAWQILVDGYVTTEDGTGIVHQAPAYGEDDQRVCE 407
Query: 78 AGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSY 137
A G+ ++ VD F V GL V +A KP+IK L+E+ RL+ S +HSY
Sbjct: 408 AAGI-----PVIISVDDGARFLPAVQDVAGLQVFEAGKPLIKLLREEGRLLRQASYEHSY 462
Query: 138 PFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAI 197
P CWR PLIYKAV SWF+RV ++ N + WVPE VK+ +FG WL ARDW+I
Sbjct: 463 PHCWRCRNPLIYKAVSSWFVRVTDFRDRMVALNQEITWVPENVKDGQFGKWLAGARDWSI 522
Query: 198 SRNRYWGTPIPLWVSDDGE--EIVCVGSIAELHRLSG-----ISVEKDLHRESVDSVTIP 250
SRNRY+G+PIP+W SDD + + GS+AEL R G + E DLHR VD +T P
Sbjct: 523 SRNRYFGSPIPVWKSDDPDYPRVDVYGSLAELERDFGRLPLNAAGEPDLHRPFVDDLTRP 582
Query: 251 SVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRG 308
+ G+ +RR+P+V D WF+SGSMP+AQ+H+PF+N FD PADFI E I Q RG
Sbjct: 583 NPDDPTGRSTMRRIPDVLDVWFDSGSMPFAQVHYPFENSDWFDSHNPADFIVEYIGQARG 642
Query: 309 WFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDP--------------- 353
WFY L +STALF + F N+I++G+VL DGQK+SKS RNYPD
Sbjct: 643 WFYLLHALSTALFDRPAFTNVISHGIVLGNDGQKVSKSLRNYPDVNDVFDRDGSDAMRWF 702
Query: 354 -MEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKE 412
M P L LV++ +G + VR L P +W + +S
Sbjct: 703 LMSSPV--LRGGNLVVTEEGVREG-----------VRQVLLP--LWNTWYFFS------- 740
Query: 413 KVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLF 472
L AN ++ + S ++D ++++ + L+E V ++ A +L F
Sbjct: 741 --LYAN----ATGYEAKRSTASAAVLDRYLLAKTRDLVEAVTADLDALDSTLASAKLRDF 794
Query: 473 IDNLTNWYVRMNRRR----LKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQ 528
D LTNWYVR +R R + GEG A+ A ++L VL T+ RV AP P + E +++
Sbjct: 795 ADLLTNWYVRRSRDRFWAGVDGEGAGAE---AFDTLYTVLETLTRVAAPLLPLVTERIWK 851
Query: 529 NLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLR 588
+ LTG RS+H P D + ++ R++++ +R++ + ++ PL
Sbjct: 852 D---LTG--GRSVHLTDWPDAAELPADDALVAAMDRVRAISSTALSLRKQAGLRVRLPLA 906
Query: 589 EAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTA 648
V+ A L E+ + ELNV+ V + + GV + LG R+
Sbjct: 907 SLTVVAEGAAALA---PFEAILRDELNVKAVCL-VEGEHSGVDRALTVKARQLGPRIGKR 962
Query: 649 FKPITQAIK 657
+ + +A K
Sbjct: 963 VQEVIRAAK 971
>sp|Q5HB43|SYI_EHRRW Isoleucine--tRNA ligase OS=Ehrlichia ruminantium (strain
Welgevonden) GN=ileS PE=3 SV=2
Length = 1117
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/680 (33%), Positives = 358/680 (52%), Gaps = 75/680 (11%)
Query: 25 TLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITR 84
+L+ L Y+P+F YF + +AF+VL +V E+ GTG+VH AP FGEDD+ +C G+
Sbjct: 313 SLEYLSYKPVFNYFIDIKNAFKVLVADFVVEDEGTGIVHMAPGFGEDDFILCKKQGIPDI 372
Query: 85 DQE-------IVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSY 137
D + +CP+D G FT +S F+ ++V D + II LK ++ H+Y
Sbjct: 373 DDKDTSKLLATICPIDDGGKFTERISDFVNMHVFDTNDQIISILKAKNLCFKTDQYLHNY 432
Query: 138 PFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAI 197
P CWR+DTPLIY+A+ SW++ V + ++ N D W+P ++ +FG WL A+DWAI
Sbjct: 433 PHCWRTDTPLIYRAMSSWYVEVTKIKNRMIDLNKDVNWIPSHIRSGQFGKWLENAKDWAI 492
Query: 198 SRNRYWGTPIPLWVSDDGE--EIVCVGSIAE-------LHRLSGISVEKDLHRESVDSVT 248
SRNR+WGTP+P+W SD+ + GSI + L I ++ DLHR +D++
Sbjct: 493 SRNRFWGTPLPVWKSDNPNYPRVDVYGSIKKVFDDIKALEEDFDIPID-DLHRPYIDNLV 551
Query: 249 IPSVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQT 306
P+ GK +RRV +VFDCWFESGSMPYAQLH+PF+N+ F++ FPADFI E + QT
Sbjct: 552 RPNPDDPTGKSMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQT 611
Query: 307 RGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANG- 365
RGWFYTL V+STALF + PF+N I +G+VL GQK+SK NY DPME FK ++
Sbjct: 612 RGWFYTLFVLSTALFDKPPFKNCICHGVVLDTQGQKLSKRLNNYADPME-IFKQYGSDAM 670
Query: 366 --------------LVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCL-IL 410
L+L DG + +N PM W + +++ I
Sbjct: 671 RFLMLSHTVSYGGDLLLDKDGVMVRDVIRNVIKPM-----------WNSYNFFTIYADID 719
Query: 411 KEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMA---------AYR 461
K + +D +E NIMD +I+ S I+ + M Y
Sbjct: 720 KVNARVISDLDE-----------VDNIMDKYIMCECISTIQSIFNAMEEFDQSVGNYGYN 768
Query: 462 LYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPF 521
+ +V F + L NWY+R R R D A N+L V++ MV+V AP+ P
Sbjct: 769 IKAACNSIVQFFEVLNNWYIRRCRSRFWSSEITKDKVNAYNTLYTVMYYMVKVSAPFLPA 828
Query: 522 LCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVEL-GRV--IRER 578
+ E ++Q L + E S+H ++P + E +++++ M+ ++ + G V IR
Sbjct: 829 ITEAIWQKLNF---QEEESVHLSLLPNIEHITLKDEDQKNIQYMKLIINICGCVLSIRNV 885
Query: 579 VTIPIKYPLREAVVI-HNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPD 637
I ++ PL + + +N+ ++ +L E+NV+++ F ++ + S + + +
Sbjct: 886 RNIRVRQPLNKITIYSYNNNDLFNLPVKYQNILLDEINVKSIVFKSNIEDIA-SFQLKLN 944
Query: 638 HKTLGARLKTAFKPITQAIK 657
LG R+ K + +K
Sbjct: 945 FPELGKRIPEKMKNLISLLK 964
>sp|Q5FH91|SYI_EHRRG Isoleucine--tRNA ligase OS=Ehrlichia ruminantium (strain Gardel)
GN=ileS PE=3 SV=2
Length = 1118
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/681 (34%), Positives = 358/681 (52%), Gaps = 76/681 (11%)
Query: 25 TLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITR 84
+L+ L Y+P+F YF + +AF+VL +V E+ GTG+VH AP FGEDD+ +C G+
Sbjct: 313 SLEYLSYKPVFNYFIDIKNAFKVLVADFVVEDEGTGIVHMAPGFGEDDFILCKKQGIPDI 372
Query: 85 DQE-------IVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSY 137
D + +CP+D G FT +S F+ ++V D + II LK ++ H+Y
Sbjct: 373 DDKDTSKLLATICPIDDGGKFTERISDFVNMHVFDTNDQIISILKAKNLCFKTDQYLHNY 432
Query: 138 PFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAI 197
P CWR+DTPLIY+A+ SW++ V + ++ N D W+P ++ +FG WL A+DWAI
Sbjct: 433 PHCWRTDTPLIYRAMSSWYVEVTKIKNRMIDLNKDVNWIPSHIRSGQFGKWLENAKDWAI 492
Query: 198 SRNRYWGTPIPLWVSDDGE--EIVCVGSIAE-------LHRLSGISVEKDLHRESVDSVT 248
SRNR+WGTP+P+W SD+ I GSI + L I ++ DLHR +D++
Sbjct: 493 SRNRFWGTPLPVWKSDNPNYPRIDVYGSIKKVFDDIKALEEDFDIPID-DLHRPYIDNLV 551
Query: 249 IPSVR--PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQT 306
P+ GK +RRV +VFDCWFESGSMPYAQLH+PF+N+ F++ FPADFI E + QT
Sbjct: 552 RPNPDDPTGKSMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQT 611
Query: 307 RGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANG- 365
RGWFYTL V+STALF + PF+N I +G+VL GQK+SK NY DPME FK ++
Sbjct: 612 RGWFYTLFVLSTALFDKPPFKNCICHGVVLDTQGQKLSKRLNNYADPME-IFKQYGSDAM 670
Query: 366 --------------LVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCL-IL 410
L+L DG + +N PM W + +++ I
Sbjct: 671 RFLMLSHTVSYGGDLLLDKDGVMVRDVIRNVIKPM-----------WNSYNFFTIYADID 719
Query: 411 KEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMA---------AYR 461
K + +D +E NIMD +I+ S I+ + M Y
Sbjct: 720 KVSARVISDLDE-----------VDNIMDKYIMCECISTIQSIFNAMEEFDQSVGNYGYN 768
Query: 462 LYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPF 521
+ +V F + L NWY+R R R D A N+L V++ MV+V AP+ P
Sbjct: 769 IKAACNSIVQFFEVLNNWYIRRCRSRFWSSEITKDKVNAYNTLYTVMYYMVKVSAPFLPA 828
Query: 522 LCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVEL-GRV--IRER 578
+ E ++Q L + E S+H ++P + E +++++ M+ ++ + G V IR
Sbjct: 829 ITEAIWQKLNF---QEEESVHLSLLPNIEHITLKDEDQKNIQYMKLIINICGCVLSIRNV 885
Query: 579 VTIPIKYPLREAVV--IHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEP 636
I ++ PL + + +N+ ++ +L E+NV+++ F ++ + S + +
Sbjct: 886 RNIRVRQPLNKITIYSYNNNNDLFNLPVKYQNILLDEINVKSIVFKSNIEDIA-SFQLKL 944
Query: 637 DHKTLGARLKTAFKPITQAIK 657
+ LG R+ K + +K
Sbjct: 945 NFPELGKRIPEKMKNLISLLK 965
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252,249,966
Number of Sequences: 539616
Number of extensions: 11121395
Number of successful extensions: 32367
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 23732
Number of HSP's gapped (non-prelim): 4495
length of query: 659
length of database: 191,569,459
effective HSP length: 124
effective length of query: 535
effective length of database: 124,657,075
effective search space: 66691535125
effective search space used: 66691535125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)