BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1861
         (661 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2VGL|S Chain S, Ap2 Clathrin Adaptor Core
 pdb|2JKR|I Chain I, Ap2 Clathrin Adaptor Core With Dileucine Peptide Rm(
           Phosphos)qikrllse
 pdb|2JKR|S Chain S, Ap2 Clathrin Adaptor Core With Dileucine Peptide Rm(
           Phosphos)qikrllse
 pdb|2JKT|I Chain I, Ap2 Clathrin Adaptor Core With Cd4 Dileucine Peptide Rm(
           Phosphos)eikrllse  Q To E Mutant
 pdb|2JKT|S Chain S, Ap2 Clathrin Adaptor Core With Cd4 Dileucine Peptide Rm(
           Phosphos)eikrllse  Q To E Mutant
 pdb|2XA7|S Chain S, Ap2 Clathrin Adaptor Core In Active Complex With Cargo
           Peptides
          Length = 142

 Score =  185 bits (469), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 86/89 (96%), Positives = 87/89 (97%)

Query: 1   MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
           M FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKI+YRRYAGLYFCICVDVNDNNL Y
Sbjct: 21  MQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80

Query: 61  LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
           LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81  LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109



 Score =  180 bits (456), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 85/93 (91%), Positives = 90/93 (96%)

Query: 86  NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
           NF +FRNFKI+YRRYAGLYFCICVDVNDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48  NFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNF 107

Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
           YKVYTVVDEMFLAGEIRETSQTKVLK+L +L+S
Sbjct: 108 YKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 140


>pdb|1W63|Q Chain Q, Ap1 Clathrin Adaptor Core
 pdb|1W63|S Chain S, Ap1 Clathrin Adaptor Core
 pdb|1W63|T Chain T, Ap1 Clathrin Adaptor Core
 pdb|1W63|U Chain U, Ap1 Clathrin Adaptor Core
 pdb|1W63|W Chain W, Ap1 Clathrin Adaptor Core
 pdb|1W63|X Chain X, Ap1 Clathrin Adaptor Core
          Length = 158

 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 65/86 (75%)

Query: 86  NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
           +F ++R+ K+VY+RYA LYFC  ++  DN L  LE IH +VE+L++YF +VCELD++FNF
Sbjct: 48  SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNF 107

Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLK 171
            K Y ++DE  + G++++TS+  VLK
Sbjct: 108 EKAYFILDEFLMGGDVQDTSKKSVLK 133



 Score = 98.6 bits (244), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 62/85 (72%)

Query: 5   DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
           D E++K++ E+  VV  R  K  +F+E+R+ K+VY+RYA LYFC  ++  DN L  LE I
Sbjct: 25  DKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 84

Query: 65  HNFVEVLNEYFHNVCELDLVFNFYK 89
           H +VE+L++YF +VCELD++FNF K
Sbjct: 85  HRYVELLDKYFGSVCELDIIFNFEK 109


>pdb|1D3U|B Chain B, Tata-Binding ProteinTRANSCRIPTION FACTOR (II)BBRE+TATA-
           Box Complex From Pyrococcus Woesei
          Length = 201

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 5/134 (3%)

Query: 256 QLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLIDFSELLQI 315
           QL+L +H  E +  LY+ A+ + L +GR    V AACVY  CRL      L + +++ ++
Sbjct: 23  QLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADIARV 82

Query: 316 CIFELGRTYLRLSQALCISIPSM--DPCLYVLRYSNRLDFGAKTHEVTMTALRILQRMKK 373
              E+GR+Y  +++ L ++   +   P  YV ++++ L    K   V   A+ IL    K
Sbjct: 83  DKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEK---VRRRAIEILDEAYK 139

Query: 374 DMLHSGRRPNGLIG 387
             L SG+ P GL+ 
Sbjct: 140 RGLTSGKSPAGLVA 153



 Score = 31.6 bits (70), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 39/87 (44%)

Query: 250 ISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLIDF 309
           ++   ++L L++     +  +   A  R LT G+    + AA +Y+   LEG      + 
Sbjct: 113 VNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQREV 172

Query: 310 SELLQICIFELGRTYLRLSQALCISIP 336
           +E+ ++    +   Y  L + L I +P
Sbjct: 173 AEVARVTEVTVRNRYKELVEKLKIKVP 199


>pdb|1AIS|B Chain B, Tata-Binding ProteinTRANSCRIPTION FACTOR (II)BTATA-Box
           Complex From Pyrococcus Woesei
          Length = 200

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 5/134 (3%)

Query: 256 QLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLIDFSELLQI 315
           QL+L +H  E +  LY+ A+ + L +GR    V AACVY  CRL      L + +++ ++
Sbjct: 22  QLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADIARV 81

Query: 316 CIFELGRTYLRLSQALCISIPSM--DPCLYVLRYSNRLDFGAKTHEVTMTALRILQRMKK 373
              E+GR+Y  +++ L ++   +   P  YV ++++ L    K   V   A+ IL    K
Sbjct: 82  DKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEK---VRRRAIEILDEAYK 138

Query: 374 DMLHSGRRPNGLIG 387
             L SG+ P GL+ 
Sbjct: 139 RGLTSGKSPAGLVA 152



 Score = 31.6 bits (70), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 39/87 (44%)

Query: 250 ISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLIDF 309
           ++   ++L L++     +  +   A  R LT G+    + AA +Y+   LEG      + 
Sbjct: 112 VNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQREV 171

Query: 310 SELLQICIFELGRTYLRLSQALCISIP 336
           +E+ ++    +   Y  L + L I +P
Sbjct: 172 AEVARVTEVTVRNRYKELVEKLKIKVP 198


>pdb|1TFB|A Chain A, Nmr Studies Of Human General Transcription Factor Tfiib:
           Dynamics And Interaction With Vp16 Activation Domain, 20
           Structures
          Length = 208

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%)

Query: 245 NCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSH 304
           N  + I+++ +++ L ++ ++ + NL+K    +   KGR    + +AC+Y+ CR EG   
Sbjct: 8   NAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPR 67

Query: 305 LLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTA 364
              +   + +I   E+GR +  + +AL  S+  +    ++ R+ + L       +V M A
Sbjct: 68  TFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLPKQVQMAA 124

Query: 365 LRILQRMKKDMLHSGRRP 382
             I ++  +  L  GR P
Sbjct: 125 THIARKAVELDLVPGRSP 142


>pdb|2PHG|A Chain A, Model For Vp16 Binding To Tfiib
          Length = 206

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%)

Query: 245 NCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSH 304
           N  + I+++ +++ L ++ ++ + NL+K    +   KGR    + +AC+Y+ CR EG   
Sbjct: 6   NAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPR 65

Query: 305 LLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTA 364
              +   + +I   E+GR +  + +AL  S+  +    ++ R+ + L       +V M A
Sbjct: 66  TFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLPKQVQMAA 122

Query: 365 LRILQRMKKDMLHSGRRP 382
             I ++  +  L  GR P
Sbjct: 123 THIARKAVELDLVPGRSP 140


>pdb|1VOL|A Chain A, Tfiib (Human Core Domain)TBP (A.THALIANA)TATA ELEMENT
           Ternary Complex
          Length = 204

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 3/138 (2%)

Query: 245 NCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSH 304
           N  + I+++ +++ L ++ ++ + NL++ A  +   KGR    + +AC+Y+ CR EG   
Sbjct: 4   NAFKEITTMADRINLPRNKVDRTNNLFRQAYEQKSLKGRANDAIASACLYIACRQEGVPR 63

Query: 305 LLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTA 364
              +   + +I   E+GR +  + +AL  S+  +    ++ R+ + L       +V M A
Sbjct: 64  TFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLPKQVQMAA 120

Query: 365 LRILQRMKKDMLHSGRRP 382
             I ++  +  L  GR P
Sbjct: 121 THIARKAVELDLVPGRSP 138


>pdb|1C9B|A Chain A, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
           Core Domain Complex Bound To An Extended, Modified
           Adenoviral Major Late Promoter (Admlp)
 pdb|1C9B|E Chain E, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
           Core Domain Complex Bound To An Extended, Modified
           Adenoviral Major Late Promoter (Admlp)
 pdb|1C9B|I Chain I, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
           Core Domain Complex Bound To An Extended, Modified
           Adenoviral Major Late Promoter (Admlp)
 pdb|1C9B|M Chain M, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
           Core Domain Complex Bound To An Extended, Modified
           Adenoviral Major Late Promoter (Admlp)
 pdb|1C9B|Q Chain Q, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
           Core Domain Complex Bound To An Extended, Modified
           Adenoviral Major Late Promoter (Admlp)
          Length = 207

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%)

Query: 245 NCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSH 304
           N  + I+++ +++ L ++ ++ + NL+K    +   KGR    + +AC+Y+ CR EG   
Sbjct: 7   NAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPR 66

Query: 305 LLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTA 364
              +   + +I   E+GR +  + +AL  S+  +    ++ R+ + L       +V M A
Sbjct: 67  TFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLPKQVQMAA 123

Query: 365 LRILQRMKKDMLHSGRRP 382
             I ++  +  L  GR P
Sbjct: 124 THIARKAVELDLVPGRSP 141


>pdb|4A4Z|A Chain A, Crystal Structure Of The S. Cerevisiae Dexh Helicase Ski2
           Bound To Amppnp
          Length = 997

 Score = 32.3 bits (72), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 202 ENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNR 236
           +N  GG++A G    S+++ G  G G + RGG NR
Sbjct: 263 DNGRGGSTARGGRGGSNTRDGRGGRGNSTRGGANR 297


>pdb|1W63|M Chain M, Ap1 Clathrin Adaptor Core
 pdb|1W63|N Chain N, Ap1 Clathrin Adaptor Core
 pdb|1W63|O Chain O, Ap1 Clathrin Adaptor Core
 pdb|1W63|P Chain P, Ap1 Clathrin Adaptor Core
 pdb|1W63|R Chain R, Ap1 Clathrin Adaptor Core
 pdb|1W63|V Chain V, Ap1 Clathrin Adaptor Core
          Length = 423

 Score = 30.8 bits (68), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 94  KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVD 153
           + ++ ++  LY       N         ++  V+V +EYF  + E  +  NF  +Y ++D
Sbjct: 56  RFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLD 115

Query: 154 EMFLAGEIRETSQTKVLKEL 173
           E+   G   +T+ +K+L+E 
Sbjct: 116 ELMDFG-YPQTTDSKILQEF 134


>pdb|3IT0|A Chain A, Crystal Structure Francisella Tularensis Histidine Acid
           Phosphatase Complexed With Phosphate
 pdb|3IT0|B Chain B, Crystal Structure Francisella Tularensis Histidine Acid
           Phosphatase Complexed With Phosphate
 pdb|3IT1|A Chain A, Crystal Structure Francisella Tularensis Histidine Acid
           Phosphatase Complexed With L(+)-Tartrate
 pdb|3IT1|B Chain B, Crystal Structure Francisella Tularensis Histidine Acid
           Phosphatase Complexed With L(+)-Tartrate
 pdb|3IT2|A Chain A, Crystal Structure Of Ligand-Free Francisella Tularensis
           Histidine Acid Phosphatase
 pdb|3IT2|B Chain B, Crystal Structure Of Ligand-Free Francisella Tularensis
           Histidine Acid Phosphatase
          Length = 342

 Score = 30.4 bits (67), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 82  DLVFNFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFH 134
           +L    YK  +   V  RY G Y  + + ++ NN C L+A++ +++ +NE F 
Sbjct: 284 NLEMELYKDGDIYTVKLRYNGKYVKLPI-MDKNNSCSLDALNKYMQSINEKFQ 335


>pdb|4E3W|A Chain A, Crystal Structure Francisella Tularensis Histidine Acid
           Phosphatase Cryoprotected With Proline
 pdb|4E3W|B Chain B, Crystal Structure Francisella Tularensis Histidine Acid
           Phosphatase Cryoprotected With Proline
          Length = 342

 Score = 30.4 bits (67), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 82  DLVFNFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFH 134
           +L    YK  +   V  RY G Y  + + ++ NN C L+A++ +++ +NE F 
Sbjct: 284 NLEMELYKDGDIYTVKLRYNGKYVKLPI-MDKNNSCSLDALNKYMQSINEKFQ 335


>pdb|3IT3|A Chain A, Crystal Structure Francisella Tularensis Histidine Acid
           Phosphatase D261a Mutant Complexed With Substrate 3'-Amp
 pdb|3IT3|B Chain B, Crystal Structure Francisella Tularensis Histidine Acid
           Phosphatase D261a Mutant Complexed With Substrate 3'-Amp
          Length = 342

 Score = 30.4 bits (67), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 82  DLVFNFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFH 134
           +L    YK  +   V  RY G Y  + + ++ NN C L+A++ +++ +NE F 
Sbjct: 284 NLEMELYKDGDIYTVKLRYNGKYVKLPI-MDKNNSCSLDALNKYMQSINEKFQ 335


>pdb|2XA7|M Chain M, Ap2 Clathrin Adaptor Core In Active Complex With Cargo
           Peptides
          Length = 446

 Score = 29.6 bits (65), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 99  RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 158
           + + ++       N N     E ++   +V+  YF  + E ++  NF  +Y ++DE+   
Sbjct: 59  KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDF 118

Query: 159 GEIRETSQTKVLK 171
           G   + S+T  LK
Sbjct: 119 G-YPQNSETGALK 130


>pdb|1ZP2|A Chain A, Structure Of The Mediator Subunit Cyclin C
          Length = 235

 Score = 29.6 bits (65), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 255 NQLRLNQHCLETSFNLYK-MALSRNLTKGRRQILVCAACVYMTCRLE 300
           ++LRL Q  L T+  L +   L +N  KG     + A C+Y++C++E
Sbjct: 40  DRLRLRQRVLATAIVLLRRYMLKKNEEKGFSLEALVATCIYLSCKVE 86


>pdb|2BP5|M Chain M, Mu2 Adaptin Subunit (Ap50) Of Ap2 Adaptor (Second Domain),
           Complexed With Non-Canonical Internalization Peptide
           Vedyeqglsg
 pdb|2VGL|M Chain M, Ap2 Clathrin Adaptor Core
 pdb|2JKR|M Chain M, Ap2 Clathrin Adaptor Core With Dileucine Peptide Rm(
           Phosphos)qikrllse
 pdb|2JKR|U Chain U, Ap2 Clathrin Adaptor Core With Dileucine Peptide Rm(
           Phosphos)qikrllse
 pdb|2JKT|M Chain M, Ap2 Clathrin Adaptor Core With Cd4 Dileucine Peptide Rm(
           Phosphos)eikrllse  Q To E Mutant
 pdb|2JKT|U Chain U, Ap2 Clathrin Adaptor Core With Cd4 Dileucine Peptide Rm(
           Phosphos)eikrllse  Q To E Mutant
          Length = 435

 Score = 29.6 bits (65), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 99  RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 158
           + + ++       N N     E ++   +V+  YF  + E ++  NF  +Y ++DE+   
Sbjct: 59  KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDF 118

Query: 159 GEIRETSQTKVLK 171
           G   + S+T  LK
Sbjct: 119 G-YPQNSETGALK 130


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.322    0.137    0.405 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,602,831
Number of Sequences: 62578
Number of extensions: 621986
Number of successful extensions: 1289
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1271
Number of HSP's gapped (non-prelim): 28
length of query: 661
length of database: 14,973,337
effective HSP length: 105
effective length of query: 556
effective length of database: 8,402,647
effective search space: 4671871732
effective search space used: 4671871732
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)