Your job contains 1 sequence.
>psy1861
MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY
LEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLE
AIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRVLRSRC
GPSPWRHILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESRE
ITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLE
GTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEV
TMTALRILQRMKKDMLHSGRRPNGLIGKYSCDSHVDISRVAGDDYIKSNELPRVIKECLE
DADLEEETEGEIRGIGPTPAMLGMATNQDAERNDQIVDDAEDDLGDIDDEEINSYILTEG
EATNKAKLWEVLNREYLTLQAERKAREEVEGKKEKKKRKPKANKATSVAKTAGEAIEKML
KEKKISTKINYDVLKSLDFTVDVNTGEMSTEQKSAPRIIENLEITSSIKKTRAKPTKEKR
EPTPKTPPKVAGDNYIKSNELPRVIKECLEDADLEEDMGGEIRGIGPTPAMLGMATNQDA
E
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1861
(661 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038499 - symbol:Brf "Brf" species:7227 "Drosophil... 670 4.6e-80 2
ZFIN|ZDB-GENE-030131-6334 - symbol:brf1a "BRF1 homolog, s... 616 1.4e-72 2
UNIPROTKB|F1NQ85 - symbol:BRF1 "Uncharacterized protein" ... 617 3.7e-72 2
MGI|MGI:1919558 - symbol:Brf1 "BRF1 homolog, subunit of R... 607 2.0e-71 2
UNIPROTKB|Q92994 - symbol:BRF1 "Transcription factor IIIB... 610 1.8e-70 2
ZFIN|ZDB-GENE-030131-6248 - symbol:brf1b "BRF1 homolog, s... 595 2.9e-70 2
UNIPROTKB|F1PRK4 - symbol:BRF1 "Uncharacterized protein" ... 507 1.4e-60 2
WB|WBGene00000271 - symbol:brf-1 species:6239 "Caenorhabd... 502 2.3e-56 2
UNIPROTKB|G3X7R9 - symbol:G3X7R9 "Uncharacterized protein... 433 6.3e-53 2
POMBASE|SPBC13E7.10c - symbol:brf1 "transcription factor ... 423 3.3e-45 2
FB|FBgn0043012 - symbol:AP-2sigma "Adaptor Protein comple... 473 5.6e-45 1
UNIPROTKB|Q17QC5 - symbol:AP2S1 "AP-2 complex subunit sig... 469 1.5e-44 1
UNIPROTKB|E2RSJ0 - symbol:AP2S1 "Uncharacterized protein"... 469 1.5e-44 1
UNIPROTKB|P53680 - symbol:AP2S1 "AP-2 complex subunit sig... 469 1.5e-44 1
UNIPROTKB|F2Z4Z5 - symbol:AP2S1 "Uncharacterized protein"... 469 1.5e-44 1
MGI|MGI:2141861 - symbol:Ap2s1 "adaptor-related protein c... 469 1.5e-44 1
RGD|620188 - symbol:Ap2s1 "adaptor-related protein comple... 469 1.5e-44 1
ZFIN|ZDB-GENE-040426-2174 - symbol:ap2s1 "adaptor-related... 463 6.4e-44 1
UNIPROTKB|J9PB52 - symbol:BRF1 "Uncharacterized protein" ... 380 2.6e-43 2
WB|WBGene00000157 - symbol:aps-2 species:6239 "Caenorhabd... 457 2.8e-43 1
RGD|1311158 - symbol:Brf1 "BRF1 homolog, subunit of RNA p... 277 5.9e-41 3
UNIPROTKB|H9KYT9 - symbol:Gga.39061 "Uncharacterized prot... 429 2.6e-40 1
CGD|CAL0004048 - symbol:BRF1 species:5476 "Candida albica... 365 9.1e-36 3
UNIPROTKB|P43072 - symbol:TDS4 "Transcription factor IIIB... 365 9.1e-36 3
SGD|S000003478 - symbol:BRF1 "TFIIIB B-related factor" sp... 357 2.0e-33 3
UNIPROTKB|I3LG98 - symbol:AP2S1 "Uncharacterized protein"... 361 1.1e-32 1
DICTYBASE|DDB_G0281215 - symbol:brf1 "transcription facto... 370 2.3e-31 1
UNIPROTKB|G4MVD4 - symbol:MGG_01762 "AP-2 complex subunit... 346 5.4e-31 1
ASPGD|ASPL0000061212 - symbol:AN0722 species:162425 "Emer... 330 3.2e-29 1
TAIR|locus:2202415 - symbol:AT1G47830 species:3702 "Arabi... 315 1.4e-27 1
DICTYBASE|DDB_G0289721 - symbol:ap2s1 "sigma adaptin" spe... 311 3.9e-27 1
POMBASE|SPBC685.04c - symbol:aps2 "AP-2 adaptor complex s... 299 8.1e-26 1
CGD|CAL0001966 - symbol:orf19.1136 species:5476 "Candida ... 282 5.8e-24 1
TAIR|locus:2122078 - symbol:AT4G35410 "AT4G35410" species... 281 7.5e-24 1
DICTYBASE|DDB_G0295711 - symbol:ap1s2 "sigma adaptin" spe... 281 7.5e-24 1
TAIR|locus:2827550 - symbol:AP19 "associated protein 19" ... 279 1.2e-23 1
WB|WBGene00000159 - symbol:aps-1 species:6239 "Caenorhabd... 275 3.4e-23 1
ZFIN|ZDB-GENE-040426-1119 - symbol:ap1s1 "adaptor-related... 269 1.5e-22 1
FB|FBgn0039132 - symbol:AP-1sigma "Adaptor Protein comple... 267 2.5e-22 1
SGD|S000003819 - symbol:APS2 "Small subunit of the clathr... 267 2.5e-22 1
UNIPROTKB|F1PR34 - symbol:AP1S2 "Uncharacterized protein"... 265 4.1e-22 1
UNIPROTKB|H0Y673 - symbol:AP1S2 "AP-1 complex subunit sig... 265 4.1e-22 1
UNIPROTKB|P56377 - symbol:AP1S2 "AP-1 complex subunit sig... 265 4.1e-22 1
UNIPROTKB|K7GMZ5 - symbol:LOC100517795 "Uncharacterized p... 265 4.1e-22 1
UNIPROTKB|K7GNH2 - symbol:LOC100517795 "Uncharacterized p... 265 4.1e-22 1
UNIPROTKB|F1NHS7 - symbol:AP1S2 "Uncharacterized protein"... 264 5.3e-22 1
UNIPROTKB|F1NHS8 - symbol:AP1S2 "Uncharacterized protein"... 264 5.3e-22 1
UNIPROTKB|Q3ZBS3 - symbol:AP1S2 "AP-1 complex subunit sig... 264 5.3e-22 1
UNIPROTKB|A6NH01 - symbol:AP1S2 "AP-1 complex subunit sig... 264 5.3e-22 1
UNIPROTKB|B4DSU4 - symbol:AP1S2 "AP-1 complex subunit sig... 264 5.3e-22 1
UNIPROTKB|B7Z3M9 - symbol:AP1S2 "AP-1 complex subunit sig... 264 5.3e-22 1
UNIPROTKB|H7BZG6 - symbol:AP1S2 "AP-1 complex subunit sig... 264 5.3e-22 1
UNIPROTKB|K7GRW0 - symbol:LOC100517795 "Uncharacterized p... 264 5.3e-22 1
MGI|MGI:1889383 - symbol:Ap1s2 "adaptor-related protein c... 264 5.3e-22 1
RGD|1561862 - symbol:Ap1s2 "adaptor-related protein compl... 264 5.3e-22 1
GENEDB_PFALCIPARUM|PF11_0187 - symbol:PF11_0187 "clathrin... 263 6.8e-22 1
UNIPROTKB|Q8III7 - symbol:PF11_0187 "Clathrin assembly pr... 263 6.8e-22 1
ZFIN|ZDB-GENE-050417-222 - symbol:ap1s3a "adaptor-related... 263 6.8e-22 1
POMBASE|SPAP27G11.06c - symbol:vas2 "AP-1 adaptor complex... 260 1.4e-21 1
TAIR|locus:2083579 - symbol:AT3G09360 species:3702 "Arabi... 246 2.2e-21 2
UNIPROTKB|Q1JQ98 - symbol:AP1S1 "AP-1 complex subunit sig... 258 2.4e-21 1
UNIPROTKB|E2RLN5 - symbol:AP1S1 "Uncharacterized protein"... 258 2.4e-21 1
UNIPROTKB|E2RTH1 - symbol:AP1S1 "Uncharacterized protein"... 258 2.4e-21 1
UNIPROTKB|P61966 - symbol:AP1S1 "AP-1 complex subunit sig... 258 2.4e-21 1
MGI|MGI:1098244 - symbol:Ap1s1 "adaptor protein complex A... 258 2.4e-21 1
RGD|1305911 - symbol:Ap1s1 "adaptor-related protein compl... 258 2.4e-21 1
UNIPROTKB|I3LVB8 - symbol:AP1S1 "Uncharacterized protein"... 257 3.0e-21 1
ZFIN|ZDB-GENE-040912-62 - symbol:ap1s3b "adaptor-related ... 256 3.9e-21 1
UNIPROTKB|H7C1E4 - symbol:AP1S1 "AP-1 complex subunit sig... 255 5.0e-21 1
ZFIN|ZDB-GENE-030131-7909 - symbol:zgc:162858 "zgc:162858... 255 5.0e-21 1
UNIPROTKB|A5PK31 - symbol:AP1S3 "Uncharacterized protein"... 253 8.2e-21 1
UNIPROTKB|F1Q0U8 - symbol:AP1S3 "Uncharacterized protein"... 253 8.2e-21 1
ASPGD|ASPL0000068146 - symbol:AN7682 species:162425 "Emer... 237 1.3e-20 2
RGD|1311772 - symbol:Ap1s3 "adaptor-related protein compl... 251 1.4e-20 1
MGI|MGI:1891304 - symbol:Ap1s3 "adaptor-related protein c... 251 1.4e-20 1
UNIPROTKB|E1BWN8 - symbol:AP1S3 "Uncharacterized protein"... 249 2.2e-20 1
UNIPROTKB|Q96PC3 - symbol:AP1S3 "AP-1 complex subunit sig... 249 2.2e-20 1
ZFIN|ZDB-GENE-030131-5448 - symbol:ap1s2 "adaptor-related... 248 2.9e-20 1
TAIR|locus:2055600 - symbol:AT2G45100 species:3702 "Arabi... 254 7.4e-20 2
UNIPROTKB|I3L9F4 - symbol:AP1S3 "Uncharacterized protein"... 244 7.8e-20 1
ASPGD|ASPL0000037776 - symbol:AN3116 species:162425 "Emer... 234 1.1e-19 4
UNIPROTKB|G4MYN9 - symbol:MGG_11227 "AP-1 complex subunit... 234 9.4e-19 1
UNIPROTKB|Q9Y587 - symbol:AP4S1 "AP-4 complex subunit sig... 229 3.3e-18 1
SGD|S000004160 - symbol:APS1 "Small subunit of the clathr... 225 8.8e-18 1
CGD|CAL0001042 - symbol:orf19.1012 species:5476 "Candida ... 224 1.1e-17 1
GENEDB_PFALCIPARUM|PFD1090c - symbol:PFD1090c "clathrin a... 224 1.1e-17 1
UNIPROTKB|Q8IFN5 - symbol:PFD1090c "Clathrin assembly pro... 224 1.1e-17 1
UNIPROTKB|F1SHF5 - symbol:AP4S1 "Uncharacterized protein"... 223 1.4e-17 1
GENEDB_PFALCIPARUM|PFB0805c - symbol:PFB0805c "clathrin c... 222 1.9e-17 1
UNIPROTKB|O96254 - symbol:PFB0805c "Clathrin coat assembl... 222 1.9e-17 1
RGD|1311990 - symbol:Ap4s1 "adaptor-related protein compl... 222 1.9e-17 1
UNIPROTKB|G3V3X7 - symbol:AP4S1 "AP-4 complex subunit sig... 222 1.9e-17 1
UNIPROTKB|Q3ZBB6 - symbol:AP4S1 "AP-4 complex subunit sig... 222 1.9e-17 1
TAIR|locus:2051905 - symbol:AT2G19790 species:3702 "Arabi... 217 6.4e-17 1
DICTYBASE|DDB_G0279359 - symbol:ap1s1 "sigma adaptin" spe... 216 8.3e-17 1
MGI|MGI:1337065 - symbol:Ap4s1 "adaptor-related protein c... 215 1.1e-16 1
UNIPROTKB|E1C054 - symbol:AP4S1 "Uncharacterized protein"... 214 1.4e-16 1
ZFIN|ZDB-GENE-030616-404 - symbol:ap4s1 "adaptor-related ... 214 1.4e-16 1
UNIPROTKB|J3KNK4 - symbol:AP4S1 "AP-4 complex subunit sig... 210 3.7e-16 1
ZFIN|ZDB-GENE-040718-274 - symbol:ap3s2 "adaptor-related ... 201 3.4e-15 1
WARNING: Descriptions of 64 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0038499 [details] [associations]
symbol:Brf "Brf" species:7227 "Drosophila melanogaster"
[GO:0006359 "regulation of transcription from RNA polymerase III
promoter" evidence=ISS;IDA;IPI] [GO:0000126 "transcription factor
TFIIIB complex" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0006383 "transcription from RNA polymerase III
promoter" evidence=IDA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IPI] [GO:0048812
"neuron projection morphogenesis" evidence=IMP] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013137 InterPro:IPR013150
Pfam:PF00382 Pfam:PF07741 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 GO:GO:0045893 GO:GO:0008270 GO:GO:0006352
GO:GO:0005667 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0006383 GO:GO:0006359 eggNOG:COG1405
PANTHER:PTHR11618 EMBL:AF262374 HSSP:P61999
ProteinModelPortal:Q9NB72 SMR:Q9NB72 STRING:Q9NB72 PaxDb:Q9NB72
PRIDE:Q9NB72 FlyBase:FBgn0038499 InParanoid:Q9NB72
OrthoDB:EOG4SJ3VV ArrayExpress:Q9NB72 Bgee:Q9NB72 Uniprot:Q9NB72
Length = 662
Score = 670 (240.9 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 125/201 (62%), Positives = 161/201 (80%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFG-GALRGGLNRESREITLDNC 246
+LEDS+IVSE+QFEE HG +A+G FVS++S GG +G G + G ESRE+T+
Sbjct: 32 VLEDSLIVSEVQFEEVGHGA-AAIGQFVSAESSGGATNYGYGKFQVGSGTESREVTIKKA 90
Query: 247 KRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLL 306
K++I+ LC QL+L+QH +T+ N +KMAL R+LT+GR+ + AACVYMTCR EGTSHLL
Sbjct: 91 KKDITLLCQQLQLSQHYADTALNFFKMALGRHLTRGRKSTHIYAACVYMTCRTEGTSHLL 150
Query: 307 IDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALR 366
ID S++ QIC +ELGRTYL+LS ALCI+IPS+DPCLY++R++NRL GAKTHEV+MTALR
Sbjct: 151 IDISDVQQICSYELGRTYLKLSHALCINIPSLDPCLYIMRFANRLQLGAKTHEVSMTALR 210
Query: 367 ILQRMKKDMLHSGRRPNGLIG 387
I+QRMKKD +HSGRRP GL G
Sbjct: 211 IVQRMKKDCMHSGRRPTGLCG 231
Score = 153 (58.9 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 40/114 (35%), Positives = 58/114 (50%)
Query: 473 NSYILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTSV--AK 530
+ Y+LTE E+ K ++W+ LN EYL Q + +
Sbjct: 445 DQYVLTEEESVAKLEMWKNLNAEYLQEQKERDERLAKEREEGKPERKKRKPRKKVIGPSS 504
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSL-DFTVDVNTGEMSTEQKSAPRIIENLE 583
TAGEAIEKML+EKKIS+KINY++LK+L D + +T + P +E L+
Sbjct: 505 TAGEAIEKMLQEKKISSKINYEILKTLTDGMGGLTDDSPTTSADTKPSTLEELK 558
Score = 56 (24.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 242 TLDNCKRNISSLCNQLRLNQHCLETSFNLYKMA--LSRN-LTKGRRQILVCAACVYMTCR 298
+LD C I N+L+L E S ++ + ++ + GRR +C A + + R
Sbjct: 181 SLDPCLY-IMRFANRLQLGAKTHEVSMTALRIVQRMKKDCMHSGRRPTGLCGAALLIAAR 239
Query: 299 LEGTSHLLIDFSELLQI 315
+ S ++D +++I
Sbjct: 240 MHDFSRTMLDVIGVVKI 256
Score = 47 (21.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 236 RESREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGR 283
++ RE D + ++ L Q ++ H LE Y ++ R LTKG+
Sbjct: 300 KKDRERIKDMGEHELTEL--QKEIDAH-LEKDLGKYSNSVYRQLTKGK 344
>ZFIN|ZDB-GENE-030131-6334 [details] [associations]
symbol:brf1a "BRF1 homolog, subunit of RNA
polymerase III transcription initiation factor IIIBa" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017025 "TBP-class
protein binding" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA]
InterPro:IPR000812 InterPro:IPR011665 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741 Pfam:PF08271
PRINTS:PR00685 PROSITE:PS51134 ZFIN:ZDB-GENE-030131-6334
GO:GO:0005634 GO:GO:0045893 GO:GO:0008270 GO:GO:0006352
GO:GO:0003743 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG1405 PANTHER:PTHR11618 KO:K15196
HOVERGEN:HBG023540 OrthoDB:EOG4NGGMJ HOGENOM:HOG000198688
HSSP:P61999 EMBL:BC046877 IPI:IPI00488634 RefSeq:NP_956192.1
UniGene:Dr.20342 ProteinModelPortal:Q802Z8 GeneID:334402
KEGG:dre:334402 CTD:334402 InParanoid:Q802Z8 NextBio:20810386
Uniprot:Q802Z8
Length = 661
Score = 616 (221.9 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 110/200 (55%), Positives = 156/200 (78%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNCK 247
+LED++IVSE+ F E+ GG+SA+G FV+ D+ G GG + + RESR TL N K
Sbjct: 29 VLEDNIIVSEVTFVESGGGGSSAVGQFVAGDASGNVPSLGGNFQTSVGRESRAATLQNAK 88
Query: 248 RNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLI 307
R I+ L +QL++NQHCL+T+FN YKMALS++LTKGR+ V AAC+Y+ CR EGT H+L+
Sbjct: 89 RQINHLGHQLQMNQHCLDTAFNFYKMALSKHLTKGRKSTHVIAACLYLVCRTEGTPHMLL 148
Query: 308 DFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALRI 367
D S+LLQ+ ++ LG+T+L L++ LCI+ P++DPCLY+ R++ L+FG K+HEV+MTALR+
Sbjct: 149 DLSDLLQVNVYVLGKTFLVLARELCINAPAIDPCLYIPRFAQLLEFGEKSHEVSMTALRL 208
Query: 368 LQRMKKDMLHSGRRPNGLIG 387
LQRMK+D +H+GRRP+GL G
Sbjct: 209 LQRMKRDWMHTGRRPSGLCG 228
Score = 136 (52.9 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 43/130 (33%), Positives = 55/130 (42%)
Query: 437 PTPAMLGMA---TNQDAER-NDQXXXXXXXXXXXXXXXXXNSYILTEGEATNKAKLWEVL 492
PT A LG++ T E+ ND + YIL + E K +LW +
Sbjct: 403 PTSASLGLSESITKMGEEKENDVEAEGGELDLSGIDEDEIDRYILNDKEVKVKTELWMIQ 462
Query: 493 NREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTSV----AKTAGEAIEKMLKEKKISTK 548
N +YL Q A TA EAIEKML++K+ISTK
Sbjct: 463 NADYLKEQKEKEERIAKEKEEGTYKERKPRKSTRRREPINANTADEAIEKMLEQKRISTK 522
Query: 549 INYDVLKSLD 558
INYDVLK L+
Sbjct: 523 INYDVLKDLN 532
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 139 LDLVFNFYKV 148
LD FNFYK+
Sbjct: 105 LDTAFNFYKM 114
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 81 LDLVFNFYK 89
LD FNFYK
Sbjct: 105 LDTAFNFYK 113
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 282 GRRQILVCAACVYMTCRLEGTSHLLIDFSELLQIC 316
GRR +C A + + R+ + + ++++C
Sbjct: 220 GRRPSGLCGAALLVAARMHEFRRTIKEVISVVKVC 254
>UNIPROTKB|F1NQ85 [details] [associations]
symbol:BRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017025 "TBP-class protein
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013137 InterPro:IPR013150
Pfam:PF00382 Pfam:PF07741 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 GO:GO:0005634 GO:GO:0045893 GO:GO:0008270
GO:GO:0006352 GO:GO:0043488 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618 OMA:YGCDGDE
GeneTree:ENSGT00390000010349 EMBL:AADN02003843 EMBL:AADN02003838
EMBL:AADN02003839 EMBL:AADN02003840 EMBL:AADN02003841
EMBL:AADN02003842 IPI:IPI00588765 Ensembl:ENSGALT00000019132
Uniprot:F1NQ85
Length = 593
Score = 617 (222.3 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 112/200 (56%), Positives = 155/200 (77%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNCK 247
+LED++IVSE+QF EN+ GG+SA+G FVS D G GG L +ESR TL N K
Sbjct: 29 VLEDNIIVSEVQFVENSGGGSSAVGQFVSLDGAGKTPTLGGGFHANLGKESRAQTLQNGK 88
Query: 248 RNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLI 307
R I L NQL+LNQHCL+T+FN +KMA+S++LT+GR+ V AAC+Y+ CR EGT H+L+
Sbjct: 89 RQIHHLGNQLQLNQHCLDTAFNFFKMAVSKHLTRGRKMTHVIAACLYLVCRTEGTPHMLL 148
Query: 308 DFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALRI 367
D S+LLQ+ ++ LG+T+L L++ LCI+ P++DPCLY+ R+++ L+FG K HEV+MTALR+
Sbjct: 149 DLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHMLEFGDKNHEVSMTALRL 208
Query: 368 LQRMKKDMLHSGRRPNGLIG 387
LQRMK+D +H+GRRP+GL G
Sbjct: 209 LQRMKRDWMHTGRRPSGLCG 228
Score = 131 (51.2 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 36/88 (40%), Positives = 44/88 (50%)
Query: 475 YILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTS----VAK 530
YIL E EA KA+LW N +YL Q A
Sbjct: 462 YILNETEAQIKAELWMKENADYLKEQKEKEARIAKEKELGIYKEHKPKKAAKKREPIQAS 521
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSLD 558
TAGEAIEKML++KKIS+KINY+VL+ L+
Sbjct: 522 TAGEAIEKMLEQKKISSKINYNVLRDLN 549
Score = 38 (18.4 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 282 GRRQILVCAACVYMTCRLEGTSHLLIDFSELLQIC 316
GRR +C A + + R+ + + ++++C
Sbjct: 220 GRRPSGLCGAALLVAARMHDFRRTVKEVIRVVKVC 254
Score = 37 (18.1 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKV 148
IH+ L H C LD FNF+K+
Sbjct: 91 IHHLGNQLQLNQH--C-LDTAFNFFKM 114
>MGI|MGI:1919558 [details] [associations]
symbol:Brf1 "BRF1 homolog, subunit of RNA polymerase III
transcription initiation factor IIIB (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0043488
"regulation of mRNA stability" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013137 InterPro:IPR013150
Pfam:PF00382 Pfam:PF07741 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 MGI:MGI:1919558 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0043488
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG1405 PANTHER:PTHR11618 PROSITE:PS00782 HOVERGEN:HBG023540
OrthoDB:EOG4NGGMJ EMBL:BC037224 IPI:IPI00319141 UniGene:Mm.196721
ProteinModelPortal:Q8CFK2 SMR:Q8CFK2 STRING:Q8CFK2
PhosphoSite:Q8CFK2 PRIDE:Q8CFK2 UCSC:uc007pfn.1
HOGENOM:HOG000198688 InParanoid:Q8CFK2 Genevestigator:Q8CFK2
GermOnline:ENSMUSG00000011158 Uniprot:Q8CFK2
Length = 676
Score = 607 (218.7 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 110/200 (55%), Positives = 156/200 (78%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNCK 247
+LED++IVSE+QF EN+ GG+SA+G FVS D G GG L +ESR TL N +
Sbjct: 31 VLEDNIIVSEVQFVENSGGGSSAVGQFVSLDGAGKTPTLGGGFHVNLGKESRAQTLQNGR 90
Query: 248 RNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLI 307
R+I L +QL+LNQHCL+T+FN +KMA+S++LT+GR+ V AAC+Y+ CR EGT H+L+
Sbjct: 91 RHIHHLGSQLQLNQHCLDTAFNFFKMAVSKHLTRGRKMAHVIAACLYLVCRTEGTPHMLL 150
Query: 308 DFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALRI 367
D S+LLQ+ ++ LG+T+L L++ LCI+ P++DPCLY+ R+++ L+FG K HEV+MTALR+
Sbjct: 151 DLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRL 210
Query: 368 LQRMKKDMLHSGRRPNGLIG 387
LQRMK+D +H+GRRP+GL G
Sbjct: 211 LQRMKRDWMHTGRRPSGLCG 230
Score = 134 (52.2 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 37/88 (42%), Positives = 44/88 (50%)
Query: 475 YILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTS----VAK 530
YIL E EA KA+LW N EYL Q +A
Sbjct: 459 YILNESEARVKAELWMRENAEYLREQKEKEARIAKEKELGIYKEHKPKKSCKRREPILAS 518
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSLD 558
TAGEAIEKML++KKIS+KINY VL+ L+
Sbjct: 519 TAGEAIEKMLEQKKISSKINYSVLRDLN 546
Score = 38 (18.4 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 282 GRRQILVCAACVYMTCRLEGTSHLLIDFSELLQIC 316
GRR +C A + + R+ + + ++++C
Sbjct: 222 GRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVC 256
Score = 37 (18.1 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKV 148
IH+ L H C LD FNF+K+
Sbjct: 93 IHHLGSQLQLNQH--C-LDTAFNFFKM 116
>UNIPROTKB|Q92994 [details] [associations]
symbol:BRF1 "Transcription factor IIIB 90 kDa subunit"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0000126 "transcription factor TFIIIB complex"
evidence=NAS] [GO:0006384 "transcription initiation from RNA
polymerase III promoter" evidence=TAS] [GO:0009303 "rRNA
transcription" evidence=TAS] [GO:0009304 "tRNA transcription"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006383
"transcription from RNA polymerase III promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000812 InterPro:IPR011665 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741 Pfam:PF08271
PRINTS:PR00685 PROSITE:PS51134 GO:GO:0005634 GO:GO:0045893
EMBL:CH471061 GO:GO:0046872 GO:GO:0008270 GO:GO:0006352
GO:GO:0009303 GO:GO:0043488 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 Reactome:REACT_1788 eggNOG:COG1405
PANTHER:PTHR11618 PROSITE:PS00782 EMBL:AL512355 GO:GO:0006384
GO:GO:0000126 KO:K15196 EMBL:U28838 EMBL:U75276 EMBL:AJ297406
EMBL:AJ297407 EMBL:AJ297408 EMBL:AK096471 EMBL:AK294899
EMBL:AK295579 EMBL:BC016743 EMBL:BC071637 EMBL:BC086856
EMBL:BC103859 IPI:IPI00016859 IPI:IPI00157643 IPI:IPI00216075
IPI:IPI00334140 IPI:IPI00607889 IPI:IPI01011010 IPI:IPI01012378
PIR:I39065 RefSeq:NP_001229715.1 RefSeq:NP_001229716.1
RefSeq:NP_001229717.1 RefSeq:NP_001229718.1 RefSeq:NP_001229719.1
RefSeq:NP_001510.2 RefSeq:NP_663718.1 UniGene:Hs.424484
ProteinModelPortal:Q92994 SMR:Q92994 IntAct:Q92994
MINT:MINT-2859415 STRING:Q92994 PhosphoSite:Q92994 DMDM:20455319
PaxDb:Q92994 PRIDE:Q92994 Ensembl:ENST00000327359
Ensembl:ENST00000379937 Ensembl:ENST00000392557
Ensembl:ENST00000440513 Ensembl:ENST00000446501
Ensembl:ENST00000546474 Ensembl:ENST00000548421 GeneID:2972
KEGG:hsa:2972 UCSC:uc001yql.2 UCSC:uc010axg.1 CTD:2972
GeneCards:GC14M105675 HGNC:HGNC:11551 MIM:604902 neXtProt:NX_Q92994
PharmGKB:PA164741296 HOVERGEN:HBG023540 InParanoid:Q92994
OMA:YGCDGDE OrthoDB:EOG4NGGMJ PhylomeDB:Q92994 ChiTaRS:BRF1
GenomeRNAi:2972 NextBio:11787 ArrayExpress:Q92994 Bgee:Q92994
CleanEx:HS_BRF1 Genevestigator:Q92994 GermOnline:ENSG00000185024
GO:GO:0009304 Uniprot:Q92994
Length = 677
Score = 610 (219.8 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 111/200 (55%), Positives = 156/200 (78%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNCK 247
+LED++IVSE+QF E++ GG+SA+G FVS D G GG L +ESR TL N +
Sbjct: 31 VLEDNIIVSEVQFVESSGGGSSAVGQFVSLDGAGKTPTLGGGFHVNLGKESRAQTLQNGR 90
Query: 248 RNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLI 307
R+I L NQL+LNQHCL+T+FN +KMA+SR+LT+GR+ V AAC+Y+ CR EGT H+L+
Sbjct: 91 RHIHHLGNQLQLNQHCLDTAFNFFKMAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLL 150
Query: 308 DFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALRI 367
D S+LLQ+ ++ LG+T+L L++ LCI+ P++DPCLY+ R+++ L+FG K HEV+MTALR+
Sbjct: 151 DLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRL 210
Query: 368 LQRMKKDMLHSGRRPNGLIG 387
LQRMK+D +H+GRRP+GL G
Sbjct: 211 LQRMKRDWMHTGRRPSGLCG 230
Score = 122 (48.0 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 36/87 (41%), Positives = 41/87 (47%)
Query: 475 YILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTS----VAK 530
YIL E EA KA+LW N EYL Q A
Sbjct: 460 YILNESEARVKAELWMRENAEYLREQREKEARIAKEKELGIYKEHKPKKSCKRREPIQAS 519
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSL 557
TA EAIEKML++KKIS+KINY VL+ L
Sbjct: 520 TAREAIEKMLEQKKISSKINYSVLRGL 546
>ZFIN|ZDB-GENE-030131-6248 [details] [associations]
symbol:brf1b "BRF1 homolog, subunit of RNA
polymerase III transcription initiation factor IIIBb" species:7955
"Danio rerio" [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000812 InterPro:IPR011665 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741 Pfam:PF08271
PRINTS:PR00685 PROSITE:PS51134 ZFIN:ZDB-GENE-030131-6248
GO:GO:0005634 GO:GO:0045893 GO:GO:0008270 GO:GO:0006352
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR11618 KO:K15196 HOVERGEN:HBG023540 HSSP:P61999
EMBL:BC060523 IPI:IPI00500469 RefSeq:NP_956183.1 UniGene:Dr.7329
ProteinModelPortal:Q6P9Z3 STRING:Q6P9Z3 GeneID:334316
KEGG:dre:334316 CTD:334316 InParanoid:Q6P9Z3 NextBio:20810348
Uniprot:Q6P9Z3
Length = 693
Score = 595 (214.5 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 108/200 (54%), Positives = 154/200 (77%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNCK 247
+LED++IVSE+QF EN+ G +SA+G FVS+D G L +ESR TL N K
Sbjct: 30 VLEDNIIVSEVQFVENSGGVSSAVGQFVSADGTSKAPVLGSGFHTSLGKESRAQTLQNGK 89
Query: 248 RNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLI 307
R I +L +QL+LNQHCL+T+FN +KM +S++LT+GR+ V AAC+Y+ CR EGT H+L+
Sbjct: 90 RQIHNLGSQLQLNQHCLDTAFNFFKMVVSKHLTRGRKMTHVIAACLYLVCRTEGTPHMLL 149
Query: 308 DFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALRI 367
D S+LLQ+ ++ LG+T+L L++ LCI+ P++DPCLY+ R+++ L+FG KTHEV+MTALR+
Sbjct: 150 DLSDLLQVNVYILGKTFLLLARELCINAPAVDPCLYIPRFAHMLEFGEKTHEVSMTALRL 209
Query: 368 LQRMKKDMLHSGRRPNGLIG 387
LQRMK+D +H+GRRP+GL G
Sbjct: 210 LQRMKRDWMHTGRRPSGLCG 229
Score = 135 (52.6 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 39/101 (38%), Positives = 48/101 (47%)
Query: 475 YILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTS---VAKT 531
YIL E E K +LW N EYL Q +A T
Sbjct: 467 YILNEIEVEAKTELWMKQNEEYLREQKEKEERIAKEKEQGTYKEKPKKPSKKREPILAST 526
Query: 532 AGEAIEKMLKEKKISTKINYDVLKSLDFTVDVNTGEMSTEQ 572
AGEAIEKML++KKIS+KINYDVL+ L+ + ST+Q
Sbjct: 527 AGEAIEKMLEQKKISSKINYDVLRDLN---SKGSASSSTQQ 564
Score = 44 (20.5 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 23/70 (32%), Positives = 29/70 (41%)
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRVLRSRCG 181
IHN L H C LD FNF+K+ VV + G T V+ L R
Sbjct: 92 IHNLGSQLQLNQH--C-LDTAFNFFKM--VVSKHLTRGR----KMTHVIAACLYLVCRTE 142
Query: 182 PSPWRHILED 191
+P H+L D
Sbjct: 143 GTP--HMLLD 150
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFYK 89
IHN L H C LD FNF+K
Sbjct: 92 IHNLGSQLQLNQH--C-LDTAFNFFK 114
Score = 39 (18.8 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 14/77 (18%), Positives = 32/77 (41%)
Query: 243 LDNCKRNISSLCNQLRLNQHCLETSFNLYKMA--LSRN-LTKGRRQILVCAACVYMTCRL 299
+D C I + L + E S ++ + R+ + GRR +C A + + R+
Sbjct: 180 VDPCLY-IPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM 238
Query: 300 EGTSHLLIDFSELLQIC 316
+ + ++++C
Sbjct: 239 HEFRRTVKEVISVVKVC 255
>UNIPROTKB|F1PRK4 [details] [associations]
symbol:BRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0017025 "TBP-class protein
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741
PRINTS:PR00685 GO:GO:0005634 GO:GO:0045893 GO:GO:0008270
GO:GO:0006352 GO:GO:0043488 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618 OMA:YGCDGDE
GeneTree:ENSGT00390000010349 EMBL:AAEX03006120 EMBL:AAEX03006121
Ensembl:ENSCAFT00000029237 Uniprot:F1PRK4
Length = 616
Score = 507 (183.5 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 90/161 (55%), Positives = 127/161 (78%)
Query: 227 GGALRGGLNRESREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQI 286
GG L +ESR TL N +R I L NQL+LNQHCL+T+FN +KMA+S++LT+GR+
Sbjct: 9 GGGFHVNLGKESRAQTLQNGRRQIHHLGNQLQLNQHCLDTAFNFFKMAVSKHLTRGRKMA 68
Query: 287 LVCAACVYMTCRLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLR 346
V AAC+Y+ CR EGT H+L+D S+LLQ+ ++ LG+T+L L++ LCI+ P++DPCLY+ R
Sbjct: 69 HVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPR 128
Query: 347 YSNRLDFGAKTHEVTMTALRILQRMKKDMLHSGRRPNGLIG 387
+++ L+FG K HEV+MTALR+LQRMK+D +H+GRRP+GL G
Sbjct: 129 FAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCG 169
Score = 131 (51.2 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 37/88 (42%), Positives = 43/88 (48%)
Query: 475 YILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTS----VAK 530
YIL E EA KA+LW N EYL Q A
Sbjct: 400 YILNEAEARVKAELWMRENAEYLREQREKEARIAKEKELGIYKEHKPKKSCKRREPIQAS 459
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSLD 558
TAGEAIEKML++KKIS+KINY VL+ L+
Sbjct: 460 TAGEAIEKMLEQKKISSKINYSVLRDLN 487
Score = 38 (18.4 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 282 GRRQILVCAACVYMTCRLEGTSHLLIDFSELLQIC 316
GRR +C A + + R+ + + ++++C
Sbjct: 161 GRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVC 195
Score = 37 (18.1 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKV 148
IH+ L H C LD FNF+K+
Sbjct: 32 IHHLGNQLQLNQH--C-LDTAFNFFKM 55
>WB|WBGene00000271 [details] [associations]
symbol:brf-1 species:6239 "Caenorhabditis elegans"
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013137 InterPro:IPR013150
Pfam:PF00382 Pfam:PF07741 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0045893 GO:GO:0002119 GO:GO:0008270 GO:GO:0000003
GO:GO:0006352 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG1405 PANTHER:PTHR11618 EMBL:FO080734
KO:K15196 GeneTree:ENSGT00390000010349 PIR:T16368
RefSeq:NP_495526.1 ProteinModelPortal:Q20429 SMR:Q20429
STRING:Q20429 PaxDb:Q20429 EnsemblMetazoa:F45E12.2.1
EnsemblMetazoa:F45E12.2.2 GeneID:174199 KEGG:cel:CELE_F45E12.2
UCSC:F45E12.2 CTD:174199 WormBase:F45E12.2 InParanoid:Q20429
OMA:CRLENTA NextBio:882969 Uniprot:Q20429
Length = 759
Score = 502 (181.8 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 99/201 (49%), Positives = 143/201 (71%)
Query: 188 ILEDSVIVSEMQFEENAHG-GTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNC 246
+LE+S++V+E QF+E A G G + +G FVSS+ + F G G ++ESRE+T
Sbjct: 30 VLEESIVVTENQFQERAGGSGHTLVGQFVSSE-RAAANNFNGM---G-SQESREMTYAKG 84
Query: 247 KRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLL 306
++ I L +QLR+N HC+ T+FN YKM +SRNLT+GR + V A C+Y+TCRLE T+HLL
Sbjct: 85 RKVIDELGSQLRINSHCMNTAFNFYKMCVSRNLTRGRNRSSVVAVCMYITCRLENTAHLL 144
Query: 307 IDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALR 366
+DFS++ QI +F+LGR LS++L I++PS DPCLY++R++ LDFG K EV A R
Sbjct: 145 LDFSDVTQINVFDLGRNLNYLSRSLRINLPSTDPCLYIMRFACVLDFGDKQKEVVNLATR 204
Query: 367 ILQRMKKDMLHSGRRPNGLIG 387
++QRMK+D + +GRRP G+ G
Sbjct: 205 LVQRMKRDWMSTGRRPTGICG 225
Score = 103 (41.3 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 32/116 (27%), Positives = 50/116 (43%)
Query: 473 NSYILTEGEATNKAKLWEVLNREYLT-LQXXXXXXXXXXXXXXXXXXXXXXXXXTSVAKT 531
+SYILTE E K W N E + ++ TS +
Sbjct: 442 DSYILTESEVAIKTDYWMKANGEAMKEIEEKKRERELNGGVKKKKPRSNRKTDTTSTS-- 499
Query: 532 AGEAIEKMLKEKKISTKINYDVLKSLDFTVDVNTGEMSTEQKSAPRIIENLEITSS 587
A+EK++ EKK+S K+NY++LK L+ T+ E AP ++++ SS
Sbjct: 500 VASAVEKVIAEKKLSNKVNYEMLKDLE-TMATGIKRDIRESTPAPVTPISIKVDSS 554
Score = 51 (23.0 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 537 EKMLKEKKISTKINYDVLKSLDFTVDVNTGEMS-TEQKSAPRIIENLEITSSIKKT 591
EK+ + K I ++ + ++ L D+ T E S T + S+P++ NL++ S+ T
Sbjct: 565 EKIARGKNIRSQASESTIQKLRSIFDL-TEECSETSKNSSPKV--NLKVESASPST 617
>UNIPROTKB|G3X7R9 [details] [associations]
symbol:G3X7R9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000812 InterPro:IPR011665
InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741 PRINTS:PR00685
GO:GO:0005634 GO:GO:0045893 GO:GO:0008270 GO:GO:0006352
GO:GO:0043488 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR11618 OMA:YGCDGDE
GeneTree:ENSGT00390000010349 EMBL:DAAA02053372 EMBL:DAAA02053373
EMBL:DAAA02053374 EMBL:DAAA02053375 EMBL:DAAA02053376
Ensembl:ENSBTAT00000044278 Uniprot:G3X7R9
Length = 639
Score = 433 (157.5 bits), Expect = 6.3e-53, Sum P(2) = 6.3e-53
Identities = 84/170 (49%), Positives = 118/170 (69%)
Query: 221 GGCQGFGGALRGGLNRESREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLT 280
G GG L +ESR TL N +R I L NQL+LNQHCL+T+FN +KMA+S++LT
Sbjct: 3 GKAPTLGGGFHVSLGKESRAQTLQNGRRQIHHLGNQLQLNQHCLDTAFNFFKMAVSKHLT 62
Query: 281 KGRRQILVCAACVYMTCRLEGTSHLLIDFSEL--LQICIFELGRTYLRLSQALCISIPSM 338
+GRR V AAC+Y+ CR EGT +L + + +FE RT+L +S+ LC+ ++
Sbjct: 63 RGRRTAHVVAACLYLVCRTEGTPRILRHLAVHGGFSVHVFESNRTFLVISRYLCVEAEAL 122
Query: 339 -DPCLYVLRYSNRLDFGAKTHEVTMTALRILQRMKKDMLHSGRRPNGLIG 387
+PCLY+ R+++ L+FG K HEV+MTALR+LQRMK+D +H+GRRP+GL G
Sbjct: 123 RNPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCG 172
Score = 136 (52.9 bits), Expect = 6.3e-53, Sum P(2) = 6.3e-53
Identities = 38/88 (43%), Positives = 43/88 (48%)
Query: 475 YILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTS----VAK 530
YIL E EA KA+LW N EYL Q A
Sbjct: 403 YILNEAEARVKAELWMRENAEYLREQKEKEARIAKERELGIYKEHKPKKSCKRREPIQAS 462
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSLD 558
TAGEAIEKML++KKIS+KINY VL+ LD
Sbjct: 463 TAGEAIEKMLEQKKISSKINYSVLRGLD 490
Score = 41 (19.5 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 20/67 (29%), Positives = 27/67 (40%)
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRVLRSRCG 181
IH+ L H C LD FNF+K+ V + G R T+ V R+
Sbjct: 32 IHHLGNQLQLNQH--C-LDTAFNFFKM--AVSKHLTRG--RRTAHVVAACLYLVCRTEGT 84
Query: 182 PSPWRHI 188
P RH+
Sbjct: 85 PRILRHL 91
Score = 38 (18.4 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 282 GRRQILVCAACVYMTCRLEGTSHLLIDFSELLQIC 316
GRR +C A + + R+ + + ++++C
Sbjct: 164 GRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVC 198
>POMBASE|SPBC13E7.10c [details] [associations]
symbol:brf1 "transcription factor TFIIIB complex
subunit Brf1" species:4896 "Schizosaccharomyces pombe" [GO:0000126
"transcription factor TFIIIB complex" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006384 "transcription initiation from
RNA polymerase III promoter" evidence=TAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013137 InterPro:IPR013150
Pfam:PF00382 Pfam:PF07741 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 PomBase:SPBC13E7.10c GO:GO:0045893 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG1405 PANTHER:PTHR11618 PROSITE:PS00782 GO:GO:0006384
GO:GO:0000126 HOGENOM:HOG000198688 PIR:T40176 RefSeq:NP_596265.2
STRING:Q9P6R0 EnsemblFungi:SPBC13E7.10c.1 GeneID:2540071
OrthoDB:EOG40P7GP NextBio:20801208 Uniprot:Q9P6R0
Length = 492
Score = 423 (154.0 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 83/200 (41%), Positives = 129/200 (64%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNCK 247
++E IVSE+ F E + G G VS+D + FGG R + ESRE+T+ N +
Sbjct: 28 VVEQDAIVSEVTFGEASTGAAVVQGSLVSNDQTHA-RTFGGPYRNQGSVESRELTIANGR 86
Query: 248 RNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLI 307
R IS+L L+LN+ +E + + +A++ N KGRR V A+C+Y+ CR+ TSH+LI
Sbjct: 87 RRISALAIALKLNERHIEAAVRYFTLAINNNFIKGRRSQYVVASCLYIVCRISKTSHMLI 146
Query: 308 DFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALRI 367
DFS++LQI +F+LG T+L+L + L ++P +DP LY+ R+++ L+FG +TH V A+R+
Sbjct: 147 DFSDILQINVFKLGSTFLKLCRVLRPNLPLLDPSLYISRFASLLEFGPETHRVANDAIRL 206
Query: 368 LQRMKKDMLHSGRRPNGLIG 387
+ RM +D + GRRP G+ G
Sbjct: 207 VARMNRDWMQIGRRPAGICG 226
Score = 69 (29.3 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 476 ILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXX-----XTS--V 528
+L + E K ++W LN++YL + TS +
Sbjct: 398 LLDKDEILTKTQVWMELNKDYLAEEEAKNLKLQEDLKKGIVRQPRKRRRYRPRDSTSDGI 457
Query: 529 AKTAGEAIEKMLKEKKISTKINYDVLKSL 557
A TA E+ ++M++++ S KINY+ L L
Sbjct: 458 ADTAAESAKEMMQQRAFSKKINYEALDML 486
>FB|FBgn0043012 [details] [associations]
symbol:AP-2sigma "Adaptor Protein complex 2, sigma subunit"
species:7227 "Drosophila melanogaster" [GO:0030135 "coated vesicle"
evidence=TAS] [GO:0008021 "synaptic vesicle" evidence=TAS]
[GO:0006901 "vesicle coating" evidence=TAS] [GO:0016183 "synaptic
vesicle coating" evidence=TAS] [GO:0007269 "neurotransmitter
secretion" evidence=NAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0030122
"AP-2 adaptor complex" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027156 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0022008 GO:GO:0008565
GO:GO:0008021 GO:GO:0007269 GO:GO:0030122 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753
GO:GO:0016183 PANTHER:PTHR11753:SF6 EMBL:AF228055
ProteinModelPortal:Q9GQM7 SMR:Q9GQM7 STRING:Q9GQM7 PaxDb:Q9GQM7
FlyBase:FBgn0043012 InParanoid:Q9GQM7 OrthoDB:EOG412JNT Bgee:Q9GQM7
Uniprot:Q9GQM7
Length = 142
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 87/89 (97%), Positives = 88/89 (98%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
MNFD DEKQKLIEEVHAVVTVRDAKHT+FVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY
Sbjct: 21 MNFDGDEKQKLIEEVHAVVTVRDAKHTSFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 84/93 (90%), Positives = 88/93 (94%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F +FRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48 SFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
YKVY+VVDEMFLA EIRETSQTKVLK+L L S
Sbjct: 108 YKVYSVVDEMFLAPEIRETSQTKVLKQLLTLNS 140
>UNIPROTKB|Q17QC5 [details] [associations]
symbol:AP2S1 "AP-2 complex subunit sigma" species:9913 "Bos
taurus" [GO:0030122 "AP-2 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027156
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005886 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 GO:GO:0005905
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
HOGENOM:HOG000185227 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
HOVERGEN:HBG050517 EMBL:BC118437 IPI:IPI00697442
RefSeq:NP_001069546.1 UniGene:Bt.6673 ProteinModelPortal:Q17QC5
SMR:Q17QC5 STRING:Q17QC5 PRIDE:Q17QC5 Ensembl:ENSBTAT00000013989
GeneID:536553 KEGG:bta:536553 CTD:1175 KO:K11827 OMA:VAPRDQK
OrthoDB:EOG4J119F BindingDB:Q17QC5 NextBio:20876970
ArrayExpress:Q17QC5 PANTHER:PTHR11753:SF6 Uniprot:Q17QC5
Length = 142
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 86/89 (96%), Positives = 87/89 (97%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKI+YRRYAGLYFCICVDVNDNNL Y
Sbjct: 21 MQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 85/93 (91%), Positives = 90/93 (96%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRNFKI+YRRYAGLYFCICVDVNDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48 NFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
YKVYTVVDEMFLAGEIRETSQTKVLK+L +L+S
Sbjct: 108 YKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 140
>UNIPROTKB|E2RSJ0 [details] [associations]
symbol:AP2S1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030122 "AP-2 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027156
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
CTD:1175 KO:K11827 OMA:VAPRDQK PANTHER:PTHR11753:SF6
EMBL:AAEX03000854 RefSeq:XP_533634.1 ProteinModelPortal:E2RSJ0
SMR:E2RSJ0 PRIDE:E2RSJ0 Ensembl:ENSCAFT00000006735 GeneID:476427
KEGG:cfa:476427 NextBio:20852087 Uniprot:E2RSJ0
Length = 142
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 86/89 (96%), Positives = 87/89 (97%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKI+YRRYAGLYFCICVDVNDNNL Y
Sbjct: 21 MQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 85/93 (91%), Positives = 90/93 (96%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRNFKI+YRRYAGLYFCICVDVNDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48 NFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
YKVYTVVDEMFLAGEIRETSQTKVLK+L +L+S
Sbjct: 108 YKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 140
>UNIPROTKB|P53680 [details] [associations]
symbol:AP2S1 "AP-2 complex subunit sigma" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030122 "AP-2 adaptor complex" evidence=TAS]
[GO:0048268 "clathrin coat assembly" evidence=TAS] [GO:0008565
"protein transporter activity" evidence=NAS] [GO:0030100
"regulation of endocytosis" evidence=TAS] [GO:0005215 "transporter
activity" evidence=NAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007173 "epidermal
growth factor receptor signaling pathway" evidence=TAS] [GO:0007268
"synaptic transmission" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] [GO:0030669
"clathrin-coated endocytic vesicle membrane" evidence=TAS]
[GO:0042059 "negative regulation of epidermal growth factor
receptor signaling pathway" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0050690
"regulation of defense response to virus by virus" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027156 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0005829 Reactome:REACT_111045
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007411 GO:GO:0007173 GO:GO:0048011 GO:GO:0006886
GO:GO:0050690 GO:GO:0016032 GO:GO:0019886 GO:GO:0008565
GO:GO:0007268 EMBL:CH471126 GO:GO:0030100 GO:GO:0048268
GO:GO:0030122 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753
HOVERGEN:HBG050517 GO:GO:0042059 CTD:1175 KO:K11827 OMA:VAPRDQK
OrthoDB:EOG4J119F PANTHER:PTHR11753:SF6 EMBL:X97074 EMBL:AJ010148
EMBL:AJ010149 EMBL:AK312003 EMBL:BC006337 IPI:IPI00183781
IPI:IPI00219840 RefSeq:NP_004060.2 RefSeq:NP_067586.1
UniGene:Hs.119591 ProteinModelPortal:P53680 SMR:P53680
IntAct:P53680 MINT:MINT-256650 STRING:P53680 PhosphoSite:P53680
DMDM:51338780 PaxDb:P53680 PRIDE:P53680 DNASU:1175
Ensembl:ENST00000263270 Ensembl:ENST00000352203 GeneID:1175
KEGG:hsa:1175 UCSC:uc002pft.1 UCSC:uc002pfu.1 GeneCards:GC19M047341
HGNC:HGNC:565 MIM:602242 neXtProt:NX_P53680 PharmGKB:PA24856
InParanoid:P53680 PhylomeDB:P53680 BindingDB:P53680 ChiTaRS:AP2S1
GenomeRNAi:1175 NextBio:4856 Bgee:P53680 CleanEx:HS_AP2S1
Genevestigator:P53680 GermOnline:ENSG00000042753 Uniprot:P53680
Length = 142
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 86/89 (96%), Positives = 87/89 (97%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKI+YRRYAGLYFCICVDVNDNNL Y
Sbjct: 21 MQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 85/93 (91%), Positives = 90/93 (96%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRNFKI+YRRYAGLYFCICVDVNDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48 NFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
YKVYTVVDEMFLAGEIRETSQTKVLK+L +L+S
Sbjct: 108 YKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 140
>UNIPROTKB|F2Z4Z5 [details] [associations]
symbol:AP2S1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030122 "AP-2 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027156
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
CTD:1175 KO:K11827 OMA:VAPRDQK PANTHER:PTHR11753:SF6 EMBL:FP102520
RefSeq:NP_001231381.1 UniGene:Ssc.18389 ProteinModelPortal:F2Z4Z5
SMR:F2Z4Z5 PRIDE:F2Z4Z5 Ensembl:ENSSSCT00000003445 GeneID:100514408
KEGG:ssc:100514408 Uniprot:F2Z4Z5
Length = 142
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 86/89 (96%), Positives = 87/89 (97%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKI+YRRYAGLYFCICVDVNDNNL Y
Sbjct: 21 MQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 85/93 (91%), Positives = 90/93 (96%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRNFKI+YRRYAGLYFCICVDVNDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48 NFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
YKVYTVVDEMFLAGEIRETSQTKVLK+L +L+S
Sbjct: 108 YKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 140
>MGI|MGI:2141861 [details] [associations]
symbol:Ap2s1 "adaptor-related protein complex 2, sigma 1
subunit" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005905 "coated pit" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030122 "AP-2 adaptor complex" evidence=ISO] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027156
PIRSF:PIRSF015588 PROSITE:PS00989 MGI:MGI:2141861 GO:GO:0006886
GO:GO:0016192 GO:GO:0008565 GO:GO:0030122 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 HOGENOM:HOG000185227
PANTHER:PTHR11753 HOVERGEN:HBG050517 PDB:2JKR PDB:2JKT PDBsum:2JKR
PDBsum:2JKT PDB:2VGL PDB:2XA7 PDBsum:2VGL PDBsum:2XA7 CTD:1175
KO:K11827 OMA:VAPRDQK OrthoDB:EOG4J119F PANTHER:PTHR11753:SF6
EMBL:AA277150 IPI:IPI00118022 RefSeq:NP_941015.2 UniGene:Mm.333597
ProteinModelPortal:P62743 SMR:P62743 DIP:DIP-37505N IntAct:P62743
STRING:P62743 PhosphoSite:P62743 PaxDb:P62743 PRIDE:P62743
Ensembl:ENSMUST00000086112 GeneID:232910 KEGG:mmu:232910
InParanoid:P62743 BindingDB:P62743 EvolutionaryTrace:P62743
NextBio:381325 Bgee:P62743 Genevestigator:P62743
GermOnline:ENSMUSG00000008036 Uniprot:P62743
Length = 142
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 86/89 (96%), Positives = 87/89 (97%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKI+YRRYAGLYFCICVDVNDNNL Y
Sbjct: 21 MQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 85/93 (91%), Positives = 90/93 (96%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRNFKI+YRRYAGLYFCICVDVNDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48 NFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
YKVYTVVDEMFLAGEIRETSQTKVLK+L +L+S
Sbjct: 108 YKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 140
>RGD|620188 [details] [associations]
symbol:Ap2s1 "adaptor-related protein complex 2, sigma 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030121
"AP-1 adaptor complex" evidence=TAS] [GO:0030122 "AP-2 adaptor
complex" evidence=IDA;TAS] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027156 PIRSF:PIRSF015588
PROSITE:PS00989 RGD:620188 Reactome:REACT_111984 GO:GO:0006886
GO:GO:0016192 GO:GO:0008565 GO:GO:0030121 GO:GO:0030122
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
HOGENOM:HOG000185227 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
HOVERGEN:HBG050517 CTD:1175 KO:K11827 OMA:VAPRDQK OrthoDB:EOG4J119F
PANTHER:PTHR11753:SF6 EMBL:M37194 EMBL:U75917 EMBL:BC088138
IPI:IPI00198371 PIR:B40535 RefSeq:NP_075241.2 UniGene:Rn.37866
ProteinModelPortal:P62744 SMR:P62744 STRING:P62744 PRIDE:P62744
Ensembl:ENSRNOT00000021310 GeneID:65046 KEGG:rno:65046
UCSC:RGD:620188 InParanoid:P62744 BindingDB:P62744
ChEMBL:CHEMBL1697667 NextBio:613880 Genevestigator:P62744
GermOnline:ENSRNOG00000015865 Uniprot:P62744
Length = 142
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 86/89 (96%), Positives = 87/89 (97%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKI+YRRYAGLYFCICVDVNDNNL Y
Sbjct: 21 MQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 85/93 (91%), Positives = 90/93 (96%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRNFKI+YRRYAGLYFCICVDVNDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48 NFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
YKVYTVVDEMFLAGEIRETSQTKVLK+L +L+S
Sbjct: 108 YKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 140
>ZFIN|ZDB-GENE-040426-2174 [details] [associations]
symbol:ap2s1 "adaptor-related protein complex 2,
sigma 1 subunit" species:7955 "Danio rerio" [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989
ZFIN:ZDB-GENE-040426-2174 GO:GO:0006886 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 HOVERGEN:HBG050517 CTD:1175 KO:K11827
OMA:VAPRDQK OrthoDB:EOG4J119F UniGene:Dr.76864 EMBL:CR293508
EMBL:BC058042 IPI:IPI00507266 RefSeq:NP_998320.1 SMR:Q6PEJ2
Ensembl:ENSDART00000033871 GeneID:100148085 KEGG:dre:100148085
InParanoid:Q6PEJ2 NextBio:20791716 Uniprot:Q6PEJ2
Length = 142
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKI+YRRYAGLYFCICVDV DNNL Y
Sbjct: 21 MQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVTDNNLAY 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 84/93 (90%), Positives = 89/93 (95%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRNFKI+YRRYAGLYFCICVDV DNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48 NFVEFRNFKIIYRRYAGLYFCICVDVTDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
YKVYTVVDEMFLAGEIRETSQTKVLK+L +L+S
Sbjct: 108 YKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 140
>UNIPROTKB|J9PB52 [details] [associations]
symbol:BRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0017025 "TBP-class
protein binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000812 InterPro:IPR011665 InterPro:IPR013150
Pfam:PF00382 Pfam:PF07741 PRINTS:PR00685 GO:GO:0005634
GO:GO:0045893 GO:GO:0008270 GO:GO:0006352 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618
GeneTree:ENSGT00390000010349 EMBL:AAEX03006120 EMBL:AAEX03006121
Ensembl:ENSCAFT00000046229 Uniprot:J9PB52
Length = 562
Score = 380 (138.8 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 65/115 (56%), Positives = 96/115 (83%)
Query: 273 MALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLIDFSELLQICIFELGRTYLRLSQALC 332
MA+S++LT+GR+ V AAC+Y+ CR EGT H+L+D S+LLQ+ ++ LG+T+L L++ LC
Sbjct: 1 MAVSKHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELC 60
Query: 333 ISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALRILQRMKKDMLHSGRRPNGLIG 387
I+ P++DPCLY+ R+++ L+FG K HEV+MTALR+LQRMK+D +H+GRRP+GL G
Sbjct: 61 INAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCG 115
Score = 131 (51.2 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 37/88 (42%), Positives = 43/88 (48%)
Query: 475 YILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTS----VAK 530
YIL E EA KA+LW N EYL Q A
Sbjct: 346 YILNEAEARVKAELWMRENAEYLREQREKEARIAKEKELGIYKEHKPKKSCKRREPIQAS 405
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSLD 558
TAGEAIEKML++KKIS+KINY VL+ L+
Sbjct: 406 TAGEAIEKMLEQKKISSKINYSVLRDLN 433
Score = 38 (18.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 282 GRRQILVCAACVYMTCRLEGTSHLLIDFSELLQIC 316
GRR +C A + + R+ + + ++++C
Sbjct: 107 GRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVC 141
>WB|WBGene00000157 [details] [associations]
symbol:aps-2 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0005623 "cell" evidence=IDA] [GO:0030276 "clathrin binding"
evidence=ISS] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0009792
GO:GO:0006886 GO:GO:0002119 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 EMBL:FO081068 GO:GO:0010171 GO:GO:0000003
GO:GO:0005623 GO:GO:0030276 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 eggNOG:COG5030 HOGENOM:HOG000185227
PANTHER:PTHR11753 GeneTree:ENSGT00530000062839 KO:K11827
OMA:VAPRDQK PIR:T15957 RefSeq:NP_508767.1 ProteinModelPortal:Q19123
SMR:Q19123 STRING:Q19123 PaxDb:Q19123 EnsemblMetazoa:F02E8.3
GeneID:184091 KEGG:cel:CELE_F02E8.3 UCSC:F02E8.3 CTD:184091
WormBase:F02E8.3 InParanoid:Q19123 NextBio:923488 Uniprot:Q19123
Length = 142
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 84/89 (94%), Positives = 86/89 (96%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M+FDDDEKQKLIEEVHA VTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVD+ DNNL Y
Sbjct: 21 MHFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDITDNNLYY 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIHNFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 84/93 (90%), Positives = 88/93 (94%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRNFKIVYRRYAGLYFCICVD+ DNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 48 NFVEFRNFKIVYRRYAGLYFCICVDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
YKVYTVVDEMFLAGEIRETSQTKVLK+L +L S
Sbjct: 108 YKVYTVVDEMFLAGEIRETSQTKVLKQLLMLTS 140
>RGD|1311158 [details] [associations]
symbol:Brf1 "BRF1 homolog, subunit of RNA polymerase III
transcription initiation factor IIIB (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017025 "TBP-class
protein binding" evidence=IEA] [GO:0043488 "regulation of mRNA
stability" evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013137 InterPro:IPR013150
Pfam:PF00382 Pfam:PF07741 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 RGD:1311158 GO:GO:0005634 GO:GO:0045893
GO:GO:0008270 GO:GO:0006352 GO:GO:0003743 GO:GO:0043488
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR11618 KO:K15196 CTD:2972 OrthoDB:EOG4NGGMJ
GeneTree:ENSGT00390000010349 EMBL:CH474034 IPI:IPI00366169
RefSeq:NP_001100231.1 UniGene:Rn.205393 Ensembl:ENSRNOT00000019689
GeneID:299347 KEGG:rno:299347 UCSC:RGD:1311158 NextBio:645266
Uniprot:D4A8W8
Length = 686
Score = 277 (102.6 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 47/83 (56%), Positives = 71/83 (85%)
Query: 305 LLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTA 364
+L+D S+LLQ+ ++ LG+T+L L++ LCI+ P++DPCLY+ R+++ L+FG K HEV+MTA
Sbjct: 158 MLLDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTA 217
Query: 365 LRILQRMKKDMLHSGRRPNGLIG 387
LR+LQRMK+D +H+GRRP+GL G
Sbjct: 218 LRLLQRMKRDWMHTGRRPSGLCG 240
Score = 144 (55.7 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDN 245
+LED++IVSE+QF EN+ GG+SA+G FVS D G GG L +ESR TL N
Sbjct: 31 VLEDNIIVSEVQFVENSGGGSSAVGQFVSLDGAGKTPTLGGGFHVNLGKESRAQTLQN 88
Score = 134 (52.2 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 37/88 (42%), Positives = 44/88 (50%)
Query: 475 YILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTS----VAK 530
YIL E EA KA+LW N EYL Q +A
Sbjct: 469 YILNESEARVKAELWMRENAEYLREQKEKEARIAKEKELGIYKEHKPKKSCKRREPILAS 528
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSLD 558
TAGEAIEKML++KKIS+KINY VL+ L+
Sbjct: 529 TAGEAIEKMLEQKKISSKINYSVLRDLN 556
Score = 38 (18.4 bits), Expect = 6.9e-15, Sum P(3) = 6.9e-15
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 282 GRRQILVCAACVYMTCRLEGTSHLLIDFSELLQIC 316
GRR +C A + + R+ + + ++++C
Sbjct: 232 GRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVC 266
>UNIPROTKB|H9KYT9 [details] [associations]
symbol:Gga.39061 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030122 "AP-2 adaptor complex" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027156 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 PANTHER:PTHR11753:SF6
EMBL:AADN02075263 Ensembl:ENSGALT00000000596 OMA:HAVVIFR
Uniprot:H9KYT9
Length = 96
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 79/84 (94%), Positives = 80/84 (95%)
Query: 6 DEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIH 65
DEKQKLIEEVHAVV RDAKHTNFVEFRNFKI+YRRYAGLYFCICVDV DNNL YLEAIH
Sbjct: 1 DEKQKLIEEVHAVVIFRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVTDNNLAYLEAIH 60
Query: 66 NFVEVLNEYFHNVCELDLVFNFYK 89
NFVEVLNEYFHNVCELDLVFNFYK
Sbjct: 61 NFVEVLNEYFHNVCELDLVFNFYK 84
Score = 345 (126.5 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 62/74 (83%), Positives = 65/74 (87%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRNFKI+YRRYAGLYFCICVDV DNNL YLEAIHNFVEVLNEYFHNVCELDLVFNF
Sbjct: 23 NFVEFRNFKIIYRRYAGLYFCICVDVTDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNF 82
Query: 146 YKVYTVVDEMFLAG 159
YKVY + EM G
Sbjct: 83 YKVYPTMGEMVTVG 96
>CGD|CAL0004048 [details] [associations]
symbol:BRF1 species:5476 "Candida albicans" [GO:0000126
"transcription factor TFIIIB complex" evidence=ISS] [GO:0006384
"transcription initiation from RNA polymerase III promoter"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000994
"RNA polymerase III core binding" evidence=IEA] [GO:0001156
"TFIIIC-class transcription factor binding" evidence=IEA]
[GO:0001112 "DNA-dependent transcriptional open complex formation"
evidence=IEA] [GO:0090074 "negative regulation of protein
homodimerization activity" evidence=IEA] [GO:0070898 "RNA
polymerase III transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0070893 "transposon integration" evidence=IEA]
InterPro:IPR000812 InterPro:IPR011665 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741 Pfam:PF08271
PRINTS:PR00685 PROSITE:PS51134 CGD:CAL0004048 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG1405 PANTHER:PTHR11618
PROSITE:PS00782 EMBL:AACQ01000165 EMBL:AACQ01000186 GO:GO:0006384
GO:GO:0000126 InterPro:IPR023486 EMBL:Z47202 PIR:B55483
RefSeq:XP_711715.1 RefSeq:XP_712189.1 ProteinModelPortal:P43072
SMR:P43072 STRING:P43072 GeneID:3646221 GeneID:3646689
KEGG:cal:CaO19.13970 KEGG:cal:CaO19.6649 KO:K15196 Uniprot:P43072
Length = 553
Score = 365 (133.5 bits), Expect = 9.1e-36, Sum P(3) = 9.1e-36
Identities = 81/210 (38%), Positives = 120/210 (57%)
Query: 179 RCGPSPWRHILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRES 238
RCG +LE++ IVSE+QF E++ G G V +D F G + + ES
Sbjct: 33 RCGT-----VLEENPIVSEVQFGESSSGAAMVQGAMVGADQARAT--FAGGRQNAM--ES 83
Query: 239 REITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCR 298
RE TL N KR I + L++ + E + +++AL+ N +GRR V A C+Y+ CR
Sbjct: 84 REQTLSNGKRKIKRIAAALKIPDYIAEAAGEWFRLALTLNFVQGRRSNNVLATCLYVACR 143
Query: 299 LEGTSHLLIDFSELLQICIFELGRTYLRLSQALCI-SIPSMDPCLYVLRYSNRLDFGAKT 357
E T H+LIDFS LQI ++ LG T+L++ +AL I S+P DP L++ + +LDF K
Sbjct: 144 KERTHHMLIDFSSRLQISVYSLGATFLKMVKALHITSLPLADPSLFIQHFVEKLDFKDKA 203
Query: 358 HEVTMTALRILQRMKKDMLHSGRRPNGLIG 387
+V A+++ RM D +H GRRP G+ G
Sbjct: 204 TKVAKDAVKLAHRMAADWIHEGRRPAGIAG 233
Score = 55 (24.4 bits), Expect = 9.1e-36, Sum P(3) = 9.1e-36
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 530 KTAGEAIEKMLKEKKISTKINYDVLKSL 557
++A ++ + + + +S KINYD LK L
Sbjct: 519 RSAADSAKMYISKTSVSKKINYDSLKGL 546
Score = 54 (24.1 bits), Expect = 9.1e-36, Sum P(3) = 9.1e-36
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 477 LTEGEATNKAKLWEVLNREYLTLQ 500
LTE E K ++W LN +YL Q
Sbjct: 444 LTEEEVAIKERIWTGLNHDYLVEQ 467
Score = 40 (19.1 bits), Expect = 3.3e-34, Sum P(3) = 3.3e-34
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 NELPRVIKECLEDADLEED 637
+ LP +++ L D DL+ED
Sbjct: 497 SSLPAELRKELGDIDLDED 515
>UNIPROTKB|P43072 [details] [associations]
symbol:TDS4 "Transcription factor IIIB 70 kDa subunit"
species:237561 "Candida albicans SC5314" [GO:0000126 "transcription
factor TFIIIB complex" evidence=ISS] [GO:0006384 "transcription
initiation from RNA polymerase III promoter" evidence=ISS]
InterPro:IPR000812 InterPro:IPR011665 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741 Pfam:PF08271
PRINTS:PR00685 PROSITE:PS51134 CGD:CAL0004048 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG1405 PANTHER:PTHR11618
PROSITE:PS00782 EMBL:AACQ01000165 EMBL:AACQ01000186 GO:GO:0006384
GO:GO:0000126 InterPro:IPR023486 EMBL:Z47202 PIR:B55483
RefSeq:XP_711715.1 RefSeq:XP_712189.1 ProteinModelPortal:P43072
SMR:P43072 STRING:P43072 GeneID:3646221 GeneID:3646689
KEGG:cal:CaO19.13970 KEGG:cal:CaO19.6649 KO:K15196 Uniprot:P43072
Length = 553
Score = 365 (133.5 bits), Expect = 9.1e-36, Sum P(3) = 9.1e-36
Identities = 81/210 (38%), Positives = 120/210 (57%)
Query: 179 RCGPSPWRHILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRES 238
RCG +LE++ IVSE+QF E++ G G V +D F G + + ES
Sbjct: 33 RCGT-----VLEENPIVSEVQFGESSSGAAMVQGAMVGADQARAT--FAGGRQNAM--ES 83
Query: 239 REITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCR 298
RE TL N KR I + L++ + E + +++AL+ N +GRR V A C+Y+ CR
Sbjct: 84 REQTLSNGKRKIKRIAAALKIPDYIAEAAGEWFRLALTLNFVQGRRSNNVLATCLYVACR 143
Query: 299 LEGTSHLLIDFSELLQICIFELGRTYLRLSQALCI-SIPSMDPCLYVLRYSNRLDFGAKT 357
E T H+LIDFS LQI ++ LG T+L++ +AL I S+P DP L++ + +LDF K
Sbjct: 144 KERTHHMLIDFSSRLQISVYSLGATFLKMVKALHITSLPLADPSLFIQHFVEKLDFKDKA 203
Query: 358 HEVTMTALRILQRMKKDMLHSGRRPNGLIG 387
+V A+++ RM D +H GRRP G+ G
Sbjct: 204 TKVAKDAVKLAHRMAADWIHEGRRPAGIAG 233
Score = 55 (24.4 bits), Expect = 9.1e-36, Sum P(3) = 9.1e-36
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 530 KTAGEAIEKMLKEKKISTKINYDVLKSL 557
++A ++ + + + +S KINYD LK L
Sbjct: 519 RSAADSAKMYISKTSVSKKINYDSLKGL 546
Score = 54 (24.1 bits), Expect = 9.1e-36, Sum P(3) = 9.1e-36
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 477 LTEGEATNKAKLWEVLNREYLTLQ 500
LTE E K ++W LN +YL Q
Sbjct: 444 LTEEEVAIKERIWTGLNHDYLVEQ 467
Score = 40 (19.1 bits), Expect = 3.3e-34, Sum P(3) = 3.3e-34
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 NELPRVIKECLEDADLEED 637
+ LP +++ L D DL+ED
Sbjct: 497 SSLPAELRKELGDIDLDED 515
>SGD|S000003478 [details] [associations]
symbol:BRF1 "TFIIIB B-related factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070893
"transposon integration" evidence=IDA] [GO:0090074 "negative
regulation of protein homodimerization activity" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0001026 "TFIIIB-type transcription factor
activity" evidence=IC] [GO:0000994 "RNA polymerase III core
binding" evidence=IDA;IPI] [GO:0001156 "TFIIIC-class transcription
factor binding" evidence=IDA;IPI] [GO:0001112 "DNA-dependent
transcriptional open complex formation" evidence=IMP] [GO:0070898
"RNA polymerase III transcriptional preinitiation complex assembly"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000126 "transcription factor TFIIIB complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013137 InterPro:IPR013150
Pfam:PF00382 Pfam:PF07741 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 SGD:S000003478 GO:GO:0045893 EMBL:BK006941
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG1405
PANTHER:PTHR11618 PROSITE:PS00782 EMBL:Y07703 Reactome:REACT_83470
GO:GO:0090074 GO:GO:0000994 GO:GO:0001156 GO:GO:0070898
Reactome:REACT_87991 GO:GO:0000126 PDB:1NGM PDBsum:1NGM
GO:GO:0001026 GO:GO:0070893 InterPro:IPR023486 KO:K15196
HOGENOM:HOG000198688 OrthoDB:EOG40P7GP EMBL:M91073 EMBL:L00630
EMBL:Z73031 PIR:A44072 RefSeq:NP_011762.1 ProteinModelPortal:P29056
SMR:P29056 DIP:DIP-191N IntAct:P29056 MINT:MINT-2783113
STRING:P29056 PaxDb:P29056 PeptideAtlas:P29056 EnsemblFungi:YGR246C
GeneID:853161 KEGG:sce:YGR246C CYGD:YGR246c
GeneTree:ENSGT00390000010349 OMA:CRKERTH EvolutionaryTrace:P29056
NextBio:973264 Genevestigator:P29056 GermOnline:YGR246C
GO:GO:0001112 Uniprot:P29056
Length = 596
Score = 357 (130.7 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 74/201 (36%), Positives = 119/201 (59%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNCK 247
+ ED+ IVSE+ F E + G G F+ + FGG+ L ESRE TL+N +
Sbjct: 31 VSEDNPIVSEVTFGETSAGAAVVQGSFIGAGQSHAA--FGGS--SAL--ESREATLNNAR 84
Query: 248 RNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLI 307
R + ++ L + ++ + +F YK+AL+ N +GRR V A+C+Y+ CR E T H+LI
Sbjct: 85 RKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLI 144
Query: 308 DFSELLQICIFELGRTYLRLSQALCIS-IPSMDPCLYVLRYSNRLDFGAKTHEVTMTALR 366
DFS LQ+ ++ +G T+L++ + L I+ +P DP L++ ++ +LD K +V A++
Sbjct: 145 DFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSLFIQHFAEKLDLADKKIKVVKDAVK 204
Query: 367 ILQRMKKDMLHSGRRPNGLIG 387
+ QRM KD + GRRP G+ G
Sbjct: 205 LAQRMSKDWMFEGRRPAGIAG 225
Score = 58 (25.5 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSL 557
T ++++ ML++ S KINYD + L
Sbjct: 568 TTADSVKNMLQKASFSKKINYDAIDGL 594
Score = 46 (21.3 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 473 NSYILTEGEATNKAKLWEVLNREYLTLQ 500
N+++L E + K ++W LN ++L Q
Sbjct: 471 NAHLLNEEASKLKERIWIGLNADFLLEQ 498
>UNIPROTKB|I3LG98 [details] [associations]
symbol:AP2S1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030122 "AP-2 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027156
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
CTD:1175 KO:K11827 PANTHER:PTHR11753:SF6 EMBL:FP102520
UniGene:Ssc.18389 GeneID:100514408 KEGG:ssc:100514408
RefSeq:NP_001231382.1 Ensembl:ENSSSCT00000029635 Uniprot:I3LG98
Length = 122
Score = 361 (132.1 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 67/70 (95%), Positives = 68/70 (97%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKI+YRRYAGLYFCICVDVNDNNL Y
Sbjct: 21 MQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80
Query: 61 LEAIHNFVEV 70
LEAIHNFVEV
Sbjct: 81 LEAIHNFVEV 90
Score = 219 (82.2 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 39/43 (90%), Positives = 41/43 (95%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEV 128
NF +FRNFKI+YRRYAGLYFCICVDVNDNNL YLEAIHNFVEV
Sbjct: 48 NFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEV 90
Score = 155 (59.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 31/45 (68%), Positives = 39/45 (86%)
Query: 134 HNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
+N+ L+ + NF +VYTVVDEMFLAGEIRETSQTKVLK+L +L+S
Sbjct: 76 NNLAYLEAIHNFVEVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 120
>DICTYBASE|DDB_G0281215 [details] [associations]
symbol:brf1 "transcription factor IIIB subunit"
species:44689 "Dictyostelium discoideum" [GO:0006383 "transcription
from RNA polymerase III promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0000126 "transcription factor TFIIIB
complex" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0017025 "TBP-class
protein binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006384 "transcription
initiation from RNA polymerase III promoter" evidence=ISS]
InterPro:IPR000812 InterPro:IPR011665 InterPro:IPR013150
Pfam:PF00382 Pfam:PF07741 PRINTS:PR00685 dictyBase:DDB_G0281215
GO:GO:0045893 GenomeReviews:CM000152_GR EMBL:AAFI02000040
GO:GO:0008270 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG1405 PANTHER:PTHR11618 InterPro:IPR021752
Pfam:PF11781 GO:GO:0006384 GO:GO:0000126 KO:K15196
RefSeq:XP_640891.1 ProteinModelPortal:Q54U85 STRING:Q54U85
EnsemblProtists:DDB0231089 GeneID:8622948 KEGG:ddi:DDB_G0281215
InParanoid:Q54U85 OMA:CASENSQ Uniprot:Q54U85
Length = 706
Score = 370 (135.3 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 76/201 (37%), Positives = 128/201 (63%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSK-GGCQGFGGALRGGLNRESREITLDNC 246
+ E + IVSE+QF G +S +G FVS+ K + GG R+SR ++++N
Sbjct: 29 VKESANIVSEVQFG----GDSSIVGTFVSATRKPSSYRSLGG-------RDSRAMSVENA 77
Query: 247 KRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSHLL 306
++ + + N LR+ H ++++ +++A+ N TKGR+ LV AAC+Y+ CR E T HLL
Sbjct: 78 RKKLDQIGNSLRIRSHLIDSAQRTFELAMENNFTKGRQTRLVAAACLYIVCRRERTPHLL 137
Query: 307 IDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALR 366
IDFSE LQ+ +F + T+L+L + L I +P +DP ++ R+++ L+FG +T +V TA +
Sbjct: 138 IDFSENLQVNVFIVAGTFLQLIKLLNIQLPIVDPSFFIQRFASALEFGDQTKDVIATANK 197
Query: 367 ILQRMKKDMLHSGRRPNGLIG 387
++ RMK+D + GR+P+G+ G
Sbjct: 198 LVARMKRDWMSIGRKPSGICG 218
>UNIPROTKB|G4MVD4 [details] [associations]
symbol:MGG_01762 "AP-2 complex subunit sigma"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027156 PIRSF:PIRSF015588
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 KO:K11827 PANTHER:PTHR11753:SF6 EMBL:CM001232
RefSeq:XP_003714763.1 ProteinModelPortal:G4MVD4 SMR:G4MVD4
EnsemblFungi:MGG_01762T0 GeneID:2679607 KEGG:mgr:MGG_01762
Uniprot:G4MVD4
Length = 143
Score = 346 (126.9 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 65/91 (71%), Positives = 75/91 (82%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FRN K+VYRRYAGL+FC CVD NDN L +LEAIH FVEVL+ +F NVCELDLVFNF
Sbjct: 49 NFVEFRNNKLVYRRYAGLFFCACVDTNDNELAFLEAIHFFVEVLDAFFGNVCELDLVFNF 108
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
YKVY ++DE+FLAGEI ETS+T VL L L
Sbjct: 109 YKVYAILDEVFLAGEIEETSKTVVLTRLEHL 139
Score = 319 (117.4 bits), Expect = 5.2e-28, P = 5.2e-28
Identities = 61/88 (69%), Positives = 71/88 (80%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKH-TNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYL 61
+ D+EK KL EVH +V RD K+ +NFVEFRN K+VYRRYAGL+FC CVD NDN L +L
Sbjct: 23 YSDEEKIKLKGEVHRLVAPRDQKYQSNFVEFRNNKLVYRRYAGLFFCACVDTNDNELAFL 82
Query: 62 EAIHNFVEVLNEYFHNVCELDLVFNFYK 89
EAIH FVEVL+ +F NVCELDLVFNFYK
Sbjct: 83 EAIHFFVEVLDAFFGNVCELDLVFNFYK 110
>ASPGD|ASPL0000061212 [details] [associations]
symbol:AN0722 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030122 "AP-2 adaptor complex" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027156 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0005886 EMBL:BN001308 GO:GO:0008565
GO:GO:0005905 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753 KO:K11827
OMA:VAPRDQK PANTHER:PTHR11753:SF6 EMBL:AACD01000011
RefSeq:XP_658326.1 ProteinModelPortal:Q5BFF8 SMR:Q5BFF8
STRING:Q5BFF8 EnsemblFungi:CADANIAT00001946 GeneID:2876499
KEGG:ani:AN0722.2 OrthoDB:EOG473T1T Uniprot:Q5BFF8
Length = 145
Score = 330 (121.2 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 64/92 (69%), Positives = 74/92 (80%)
Query: 86 NFYKF-RNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFN 144
NF +F R+ KIVYRRYAGL+FC CVD DN L YLEAIH FVEVL+++F NVCELDLVFN
Sbjct: 50 NFVEFKRSTKIVYRRYAGLFFCACVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFN 109
Query: 145 FYKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
FYKVY ++DE+FLAGEI ETS+ VL L L
Sbjct: 110 FYKVYAILDEVFLAGEIEETSKQVVLTRLEHL 141
Score = 310 (114.2 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 61/89 (68%), Positives = 71/89 (79%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKH-TNFVEF-RNFKIVYRRYAGLYFCICVDVNDNNLCY 60
+ D+EK KL EVH +V RD K+ +NFVEF R+ KIVYRRYAGL+FC CVD DN L Y
Sbjct: 24 YSDEEKVKLKGEVHRLVAPRDQKYQSNFVEFKRSTKIVYRRYAGLFFCACVDATDNELAY 83
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LEAIH FVEVL+++F NVCELDLVFNFYK
Sbjct: 84 LEAIHFFVEVLDQFFGNVCELDLVFNFYK 112
>TAIR|locus:2202415 [details] [associations]
symbol:AT1G47830 species:3702 "Arabidopsis thaliana"
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0030125 "clathrin vesicle coat" evidence=ISS]
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027156
PIRSF:PIRSF015588 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0008565 GO:GO:0005905 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 HOGENOM:HOG000185227
PANTHER:PTHR11753 KO:K11827 OMA:VAPRDQK PANTHER:PTHR11753:SF6
EMBL:AC012463 EMBL:BT003048 EMBL:AK227317 IPI:IPI00536237
PIR:H96518 RefSeq:NP_175219.1 UniGene:At.43035
ProteinModelPortal:Q84WL9 SMR:Q84WL9 STRING:Q84WL9 PaxDb:Q84WL9
PRIDE:Q84WL9 EnsemblPlants:AT1G47830.1 GeneID:841199
KEGG:ath:AT1G47830 TAIR:At1g47830 InParanoid:Q84WL9
PhylomeDB:Q84WL9 ProtClustDB:CLSN2682154 Genevestigator:Q84WL9
Uniprot:Q84WL9
Length = 142
Score = 315 (115.9 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 59/107 (55%), Positives = 79/107 (73%)
Query: 73 EY-FHN-VCELDLVF-NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVL 129
EY H V D F NF +FR K++YRRYAGL+F +CVD+ DN L YLE+IH FVE+L
Sbjct: 32 EYEVHRLVVNRDAKFTNFVEFRTHKVIYRRYAGLFFSVCVDITDNELAYLESIHLFVEIL 91
Query: 130 NEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
+ +F NVCELDLVFNF+KVY ++DE LAGE++ETS+ +++ + L
Sbjct: 92 DHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKRAIIERMSEL 138
Score = 310 (114.2 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 55/86 (63%), Positives = 69/86 (80%)
Query: 4 DDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
++ EK K+ EVH +V RDAK TNFVEFR K++YRRYAGL+F +CVD+ DN L YLE+
Sbjct: 24 EESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYRRYAGLFFSVCVDITDNELAYLES 83
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFYK 89
IH FVE+L+ +F NVCELDLVFNF+K
Sbjct: 84 IHLFVEILDHFFSNVCELDLVFNFHK 109
>DICTYBASE|DDB_G0289721 [details] [associations]
symbol:ap2s1 "sigma adaptin" species:44689
"Dictyostelium discoideum" [GO:0030122 "AP-2 adaptor complex"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005905 "coated pit" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027156 PIRSF:PIRSF015588
dictyBase:DDB_G0289721 GO:GO:0005886 GO:GO:0008565 GO:GO:0005905
GenomeReviews:CM000154_GR EMBL:AAFI02000148 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753
HSSP:P62743 KO:K11827 OMA:VAPRDQK PANTHER:PTHR11753:SF6
RefSeq:XP_636079.2 ProteinModelPortal:Q54H39 SMR:Q54H39
EnsemblProtists:DDB0234236 GeneID:8627289 KEGG:ddi:DDB_G0289721
ProtClustDB:CLSZ2734179 Uniprot:Q54H39
Length = 142
Score = 311 (114.5 bits), Expect = 3.9e-27, P = 3.9e-27
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +FR +IVYRRYAGL+F +CVD DN L LEAIH FVEVL+ YF NVCELDLVFNF
Sbjct: 48 NFVEFRTHRIVYRRYAGLFFSVCVDPTDNELFCLEAIHLFVEVLDAYFGNVCELDLVFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
YKVY ++DE+FLAGE+ E S+ +L+ + L
Sbjct: 108 YKVYAIIDEVFLAGELMEPSKHVILQRMEFL 138
Score = 309 (113.8 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 58/87 (66%), Positives = 68/87 (78%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLE 62
++D EK+KL E+H +V R+ K TNFVEFR +IVYRRYAGL+F +CVD DN L LE
Sbjct: 23 YEDVEKRKLSHEIHKIVNSRETKFTNFVEFRTHRIVYRRYAGLFFSVCVDPTDNELFCLE 82
Query: 63 AIHNFVEVLNEYFHNVCELDLVFNFYK 89
AIH FVEVL+ YF NVCELDLVFNFYK
Sbjct: 83 AIHLFVEVLDAYFGNVCELDLVFNFYK 109
>POMBASE|SPBC685.04c [details] [associations]
symbol:aps2 "AP-2 adaptor complex subunit Aps2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISO] [GO:0030122
"AP-2 adaptor complex" evidence=ISO] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027156
PIRSF:PIRSF015588 PROSITE:PS00989 PomBase:SPBC685.04c GO:GO:0005829
GO:GO:0005634 GO:GO:0006886 GO:GO:0016192 GO:GO:0008565
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0030122
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
PANTHER:PTHR11753 KO:K11827 OMA:VAPRDQK PANTHER:PTHR11753:SF6
OrthoDB:EOG473T1T PIR:T40635 RefSeq:NP_596138.1
ProteinModelPortal:Q9Y7L6 SMR:Q9Y7L6 STRING:Q9Y7L6
EnsemblFungi:SPBC685.04c.1 GeneID:2541086 KEGG:spo:SPBC685.04c
HOGENOM:HOG000185228 NextBio:20802199 Uniprot:Q9Y7L6
Length = 143
Score = 299 (110.3 bits), Expect = 8.1e-26, P = 8.1e-26
Identities = 61/127 (48%), Positives = 82/127 (64%)
Query: 51 VDVNDNNLCYLEA-IHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICV 109
V +D+ L+A IH + N+ F NF ++ N K+VYRRYAGLYFC CV
Sbjct: 21 VPFDDDEKVRLKARIHQLISQRNQKFQA--------NFLEWENSKLVYRRYAGLYFCFCV 72
Query: 110 DVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKV 169
D DN+L LE IH FVE+L+ +F NVCELDL+FNFYKV ++DE+ L GEI E+++ V
Sbjct: 73 DSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEIILGGEIGESNKKSV 132
Query: 170 LKELRVL 176
L+ + L
Sbjct: 133 LERIEAL 139
Score = 293 (108.2 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAK-HTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYL 61
FDDDEK +L +H +++ R+ K NF+E+ N K+VYRRYAGLYFC CVD DN+L L
Sbjct: 23 FDDDEKVRLKARIHQLISQRNQKFQANFLEWENSKLVYRRYAGLYFCFCVDSTDNDLAIL 82
Query: 62 EAIHNFVEVLNEYFHNVCELDLVFNFYK 89
E IH FVE+L+ +F NVCELDL+FNFYK
Sbjct: 83 EMIHFFVEILDSFFGNVCELDLIFNFYK 110
>CGD|CAL0001966 [details] [associations]
symbol:orf19.1136 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027156 PIRSF:PIRSF015588 PROSITE:PS00989 CGD:CAL0001966
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
PANTHER:PTHR11753 KO:K11827 PANTHER:PTHR11753:SF6 EMBL:AACQ01000137
EMBL:AACQ01000136 RefSeq:XP_713006.1 RefSeq:XP_713040.1
ProteinModelPortal:Q59TV8 SMR:Q59TV8 STRING:Q59TV8 GeneID:3645293
GeneID:3645325 KEGG:cal:CaO19.1136 KEGG:cal:CaO19.8729
Uniprot:Q59TV8
Length = 145
Score = 282 (104.3 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 51/91 (56%), Positives = 71/91 (78%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +F+ K+VYRRYAGLYF +D+ D+ L YLE++H FVE+L+ YF +VCE+DLVFNF
Sbjct: 51 NFVEFQQNKLVYRRYAGLYFLCGIDLIDSELSYLESLHFFVEILDVYFDSVCEVDLVFNF 110
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
YK+Y ++DE++L GEI+E S+ K+L L L
Sbjct: 111 YKLYYILDEIYLGGEIQELSKKKILNRLSYL 141
Score = 271 (100.5 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 51/102 (50%), Positives = 75/102 (73%)
Query: 2 NFDDDEKQKLIEEVHAVVTVRDAKH-TNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
++ +KQ+ I ++H +++ RD+KH +NFVEF+ K+VYRRYAGLYF +D+ D+ L Y
Sbjct: 24 SYTPQQKQQYISDIHRLISSRDSKHQSNFVEFQQNKLVYRRYAGLYFLCGIDLIDSELSY 83
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAG 102
LE++H FVE+L+ YF +VCE+DLVFNFYK + I+ Y G
Sbjct: 84 LESLHFFVEILDVYFDSVCEVDLVFNFYKL--YYILDEIYLG 123
>TAIR|locus:2122078 [details] [associations]
symbol:AT4G35410 "AT4G35410" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA;ISS] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030125
"clathrin vesicle coat" evidence=ISS] [GO:0030244 "cellulose
biosynthetic process" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794
GO:GO:0006886 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030117
GO:GO:0008565 GO:GO:0006897 GO:GO:0030665 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 HOGENOM:HOG000185227
ProtClustDB:CLSN2686072 PANTHER:PTHR11753 OMA:MMQFMLL EMBL:U92086
EMBL:AL022604 EMBL:AL161587 EMBL:AK119004 EMBL:BT004964
EMBL:AY086242 IPI:IPI00526075 PIR:T06116 RefSeq:NP_195267.1
UniGene:At.2276 UniGene:At.63750 ProteinModelPortal:O23685
SMR:O23685 PaxDb:O23685 PRIDE:O23685 EnsemblPlants:AT4G35410.2
GeneID:829694 KEGG:ath:AT4G35410 TAIR:At4g35410 InParanoid:O23685
PhylomeDB:O23685 Genevestigator:O23685 Uniprot:O23685
Length = 162
Score = 281 (104.0 bits), Expect = 7.5e-24, P = 7.5e-24
Identities = 46/86 (53%), Positives = 69/86 (80%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF ++R +K+VY+RYA LYFC+C+D DN L LE IH++VE+L+ YF +VCELDL+FNF
Sbjct: 48 NFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLK 171
+K Y ++DE+ +AGE++E+S+ V +
Sbjct: 108 HKAYYILDELLIAGELQESSKKTVAR 133
Score = 263 (97.6 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 46/83 (55%), Positives = 63/83 (75%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
E+ K+I E+ V+ R K NFVE+R +K+VY+RYA LYFC+C+D DN L LE IH+
Sbjct: 27 ERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHH 86
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
+VE+L+ YF +VCELDL+FNF+K
Sbjct: 87 YVEILDRYFGSVCELDLIFNFHK 109
>DICTYBASE|DDB_G0295711 [details] [associations]
symbol:ap1s2 "sigma adaptin" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0030665 "clathrin-coated
vesicle membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 dictyBase:DDB_G0295711 GO:GO:0005794
GenomeReviews:CM000155_GR GO:GO:0008565 GO:GO:0006897 GO:GO:0030665
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 OMA:MMRFMLL
PANTHER:PTHR11753 KO:K12394 EMBL:AAFI02000179 RefSeq:XP_001733048.1
ProteinModelPortal:B0G185 PRIDE:B0G185 EnsemblProtists:DDB0252557
GeneID:8628284 KEGG:ddi:DDB_G0295711 ProtClustDB:CLSZ2432660
Uniprot:B0G185
Length = 154
Score = 281 (104.0 bits), Expect = 7.5e-24, P = 7.5e-24
Identities = 47/86 (54%), Positives = 68/86 (79%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +++ +KI+++RYA LYF +C D DN L LE IH+FVE+L+ YF NVCELDL+FNF
Sbjct: 49 NFLEWKEYKIIFKRYASLYFVVCCDREDNELIVLEIIHHFVEILDRYFGNVCELDLIFNF 108
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLK 171
+K Y ++DE+ +AGE++ETS+ VL+
Sbjct: 109 HKAYYILDELIMAGELQETSKKTVLR 134
Score = 247 (92.0 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 44/87 (50%), Positives = 61/87 (70%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLE 62
F + EK + E+ +V R K NF+E++ +KI+++RYA LYF +C D DN L LE
Sbjct: 24 FTNKEKSRFTREIGNMVLNRPPKLCNFLEWKEYKIIFKRYASLYFVVCCDREDNELIVLE 83
Query: 63 AIHNFVEVLNEYFHNVCELDLVFNFYK 89
IH+FVE+L+ YF NVCELDL+FNF+K
Sbjct: 84 IIHHFVEILDRYFGNVCELDLIFNFHK 110
>TAIR|locus:2827550 [details] [associations]
symbol:AP19 "associated protein 19" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA;ISS] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030125
"clathrin vesicle coat" evidence=ISS] [GO:0006301 "postreplication
repair" evidence=RCA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794
GO:GO:0006886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030117
GO:GO:0008565 GO:GO:0006897 GO:GO:0030665 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 EMBL:U92084 EMBL:U92085 EMBL:AY085130
EMBL:BT025619 IPI:IPI00542819 PIR:E84551 RefSeq:NP_565415.1
UniGene:At.10509 ProteinModelPortal:Q8LEZ8 SMR:Q8LEZ8 PaxDb:Q8LEZ8
PRIDE:Q8LEZ8 EnsemblPlants:AT2G17380.1 GeneID:816245
KEGG:ath:AT2G17380 TAIR:At2g17380 eggNOG:COG5030
HOGENOM:HOG000185227 InParanoid:Q8LEZ8 OMA:MMRFMLL PhylomeDB:Q8LEZ8
ProtClustDB:CLSN2686072 Genevestigator:Q8LEZ8 PANTHER:PTHR11753
Uniprot:Q8LEZ8
Length = 161
Score = 279 (103.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 46/86 (53%), Positives = 69/86 (80%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF ++R +K+VY+RYA LYFC+C+D DN L LE IH++VE+L+ YF +VCELDL+FNF
Sbjct: 48 NFIEWRGYKVVYKRYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLK 171
+K Y ++DE+ +AGE++E+S+ V +
Sbjct: 108 HKAYYILDELLIAGELQESSKKTVAR 133
Score = 261 (96.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 45/87 (51%), Positives = 64/87 (73%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLE 62
+ E+ K+I E+ V+ R K NF+E+R +K+VY+RYA LYFC+C+D DN L LE
Sbjct: 23 YTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKRYASLYFCMCIDEADNELEVLE 82
Query: 63 AIHNFVEVLNEYFHNVCELDLVFNFYK 89
IH++VE+L+ YF +VCELDL+FNF+K
Sbjct: 83 IIHHYVEILDRYFGSVCELDLIFNFHK 109
>WB|WBGene00000159 [details] [associations]
symbol:aps-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0009792
GO:GO:0040007 GO:GO:0006886 GO:GO:0002119 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0040011 GO:GO:0000003
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
HOGENOM:HOG000185227 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
KO:K12394 OMA:MMQFMLL EMBL:FO080494 PIR:T31801 RefSeq:NP_504559.1
ProteinModelPortal:O16369 SMR:O16369 STRING:O16369 PaxDb:O16369
EnsemblMetazoa:F29G9.3.1 EnsemblMetazoa:F29G9.3.2 GeneID:178989
KEGG:cel:CELE_F29G9.3 UCSC:F29G9.3 CTD:178989 WormBase:F29G9.3
InParanoid:O16369 NextBio:903428 Uniprot:O16369
Length = 157
Score = 275 (101.9 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 47/87 (54%), Positives = 68/87 (78%)
Query: 87 FYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFY 146
F ++++ K+VY+RYA LYFC ++ NDN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 49 FLEYKDLKVVYKRYASLYFCCAIEQNDNELITLEVIHRYVELLDKYFGSVCELDIIFNFE 108
Query: 147 KVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE LAGEI+ETS+ +VLK +
Sbjct: 109 KAYFILDEFLLAGEIQETSKKQVLKAI 135
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 40/87 (45%), Positives = 61/87 (70%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLE 62
+ D +K+K+ E+ + R K F+E+++ K+VY+RYA LYFC ++ NDN L LE
Sbjct: 23 YPDKQKKKICRELITQILARKPKMCAFLEYKDLKVVYKRYASLYFCCAIEQNDNELITLE 82
Query: 63 AIHNFVEVLNEYFHNVCELDLVFNFYK 89
IH +VE+L++YF +VCELD++FNF K
Sbjct: 83 VIHRYVELLDKYFGSVCELDIIFNFEK 109
>ZFIN|ZDB-GENE-040426-1119 [details] [associations]
symbol:ap1s1 "adaptor-related protein complex 1,
sigma 1 subunit" species:7955 "Danio rerio" [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030198 "extracellular matrix organization" evidence=IMP]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 ZFIN:ZDB-GENE-040426-1119
GO:GO:0005886 GO:GO:0048471 GO:GO:0006886 GO:GO:0007399
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 GO:GO:0030198
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
HOGENOM:HOG000185227 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
HOVERGEN:HBG050517 EMBL:BX470232 EMBL:BC070003 IPI:IPI00481586
UniGene:Dr.75705 SMR:Q6NSP1 STRING:Q6NSP1
Ensembl:ENSDART00000101109 Uniprot:Q6NSP1
Length = 158
Score = 269 (99.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 53/108 (49%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC V+ DN L LE IH FVE+L++YF +VCELD++FNF
Sbjct: 48 SFLEWRDLKIVYKRYASLYFCCAVEEQDNELITLEVIHRFVELLDKYFGSVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE + GEI++TS+ VLK + L SP R +LE+
Sbjct: 108 EKAYFILDEFLMGGEIQDTSKKSVLKAIEQADLLQEEDESP-RSVLEE 154
Score = 242 (90.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 44/83 (53%), Positives = 61/83 (73%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
+K+K++ E+ VV R K +F+E+R+ KIVY+RYA LYFC V+ DN L LE IH
Sbjct: 27 DKKKMVRELMQVVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAVEEQDNELITLEVIHR 86
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
FVE+L++YF +VCELD++FNF K
Sbjct: 87 FVELLDKYFGSVCELDIIFNFEK 109
>FB|FBgn0039132 [details] [associations]
symbol:AP-1sigma "Adaptor Protein complex 1, sigma subunit"
species:7227 "Drosophila melanogaster" [GO:0016183 "synaptic
vesicle coating" evidence=TAS] [GO:0006901 "vesicle coating"
evidence=TAS] [GO:0008021 "synaptic vesicle" evidence=TAS]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0048749 "compound eye development" evidence=IMP]
[GO:0042051 "compound eye photoreceptor development" evidence=IMP]
[GO:0046907 "intracellular transport" evidence=IMP] [GO:0008565
"protein transporter activity" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0035976 "AP1 complex" evidence=IMP]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0007411 GO:GO:0006886
GO:GO:0030117 GO:GO:0008565 GO:GO:0008021 GO:GO:0042051
GO:GO:0046907 GO:GO:0007269 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 GO:GO:0016183 GO:GO:0035976
EMBL:AF228054 ProteinModelPortal:Q9GQM8 SMR:Q9GQM8 STRING:Q9GQM8
PRIDE:Q9GQM8 FlyBase:FBgn0039132 InParanoid:Q9GQM8
OrthoDB:EOG4J3V08 ArrayExpress:Q9GQM8 Bgee:Q9GQM8 Uniprot:Q9GQM8
Length = 164
Score = 267 (99.0 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 46/88 (52%), Positives = 68/88 (77%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++++ KIVY+RYA LYFC ++ NDN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 48 SFLEWKDCKIVYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE+ + GEI+ETS+ VLK +
Sbjct: 108 EKAYFILDELLIGGEIQETSKKNVLKAI 135
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 42/89 (47%), Positives = 62/89 (69%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY 60
M + D K+K+ E+ + R K +F+E+++ KIVY+RYA LYFC ++ NDN L
Sbjct: 21 MAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLYFCCAIEQNDNELLT 80
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
LE IH +VE+L++YF +VCELD++FNF K
Sbjct: 81 LEIIHRYVELLDKYFGSVCELDIIFNFEK 109
>SGD|S000003819 [details] [associations]
symbol:APS2 "Small subunit of the clathrin-associated adaptor
complex AP-2" species:4932 "Saccharomyces cerevisiae" [GO:0005905
"coated pit" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA;IC] [GO:0006810 "transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0030122 "AP-2 adaptor
complex" evidence=IEA;IDA;IPI] [GO:0030136 "clathrin-coated
vesicle" evidence=IDA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027156 PIRSF:PIRSF015588
PROSITE:PS00989 SGD:S000003819 GO:GO:0006886 GO:GO:0016192
EMBL:BK006943 GO:GO:0008565 EMBL:L47993 GO:GO:0030122
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
HOGENOM:HOG000185227 PANTHER:PTHR11753 KO:K11827 OMA:VAPRDQK
PANTHER:PTHR11753:SF6 OrthoDB:EOG473T1T EMBL:M37193 EMBL:Z49558
EMBL:AY557893 PIR:C40535 RefSeq:NP_012592.1
ProteinModelPortal:Q00381 SMR:Q00381 DIP:DIP-5093N IntAct:Q00381
MINT:MINT-485760 STRING:Q00381 EnsemblFungi:YJR058C GeneID:853521
KEGG:sce:YJR058C CYGD:YJR058c GeneTree:ENSGT00650000094465
NextBio:974200 Genevestigator:Q00381 GermOnline:YJR058C
Uniprot:Q00381
Length = 147
Score = 267 (99.0 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 52/92 (56%), Positives = 70/92 (76%)
Query: 86 NFYKFRNF-KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFN 144
NF +F + K++YRRYAGLYF + VD+ D+ YL IH FVEVL+ +F NVCELD+VFN
Sbjct: 52 NFVEFSDSTKLIYRRYAGLYFVMGVDLLDDEPIYLCHIHLFVEVLDAFFGNVCELDIVFN 111
Query: 145 FYKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
FYKVY ++DEMF+ GEI+E S+ +L+ L +L
Sbjct: 112 FYKVYMIMDEMFIGGEIQEISKDMLLERLSIL 143
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 47/88 (53%), Positives = 63/88 (71%)
Query: 4 DDDEKQKLIEEVHAVVTVRDAKH-TNFVEFRNF-KIVYRRYAGLYFCICVDVNDNNLCYL 61
D Q I +++ +++ RD KH +NFVEF + K++YRRYAGLYF + VD+ D+ YL
Sbjct: 27 DPQRSQDAIAQIYRLISSRDHKHQSNFVEFSDSTKLIYRRYAGLYFVMGVDLLDDEPIYL 86
Query: 62 EAIHNFVEVLNEYFHNVCELDLVFNFYK 89
IH FVEVL+ +F NVCELD+VFNFYK
Sbjct: 87 CHIHLFVEVLDAFFGNVCELDIVFNFYK 114
>UNIPROTKB|F1PR34 [details] [associations]
symbol:AP1S2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GeneTree:ENSGT00530000062839 KO:K12394
OMA:MMQFMLL CTD:8905 EMBL:AAEX03026161 RefSeq:XP_854230.2
ProteinModelPortal:F1PR34 Ensembl:ENSCAFT00000019414 GeneID:611468
KEGG:cfa:611468 Uniprot:F1PR34
Length = 157
Score = 265 (98.3 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 51/108 (47%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE L GE++ETS+ VLK + L +P R +LE+
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEEAETP-RSVLEE 153
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>UNIPROTKB|H0Y673 [details] [associations]
symbol:AP1S2 "AP-1 complex subunit sigma-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 HGNC:HGNC:560 EMBL:AC004106
ProteinModelPortal:H0Y673 Ensembl:ENST00000452376 Uniprot:H0Y673
Length = 153
Score = 265 (98.3 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 50/108 (46%), Positives = 71/108 (65%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 44 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 103
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE L GE++ETS+ VLK + L W + ED
Sbjct: 104 EKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQESQNEEWGGLSED 151
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 21 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 80
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 81 HRYVELLDKYFGSVCELDIIFNFEK 105
>UNIPROTKB|P56377 [details] [associations]
symbol:AP1S2 "AP-1 complex subunit sigma-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0005905
"coated pit" evidence=IEA] [GO:0030119 "AP-type membrane coat
adaptor complex" evidence=TAS] [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0005765 "lysosomal membrane" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006892 "post-Golgi
vesicle-mediated transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=TAS] [GO:0032588 "trans-Golgi network membrane"
evidence=TAS] [GO:0050690 "regulation of defense response to virus
by virus" evidence=TAS] Reactome:REACT_11123 InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0000139 GO:GO:0050690
GO:GO:0016032 GO:GO:0005765 GO:GO:0032588 GO:GO:0019886
GO:GO:0008565 GO:GO:0006897 GO:GO:0005905 GO:GO:0030659
GO:GO:0016044 GO:GO:0006892 GO:GO:0030119 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 HOGENOM:HOG000185227
PANTHER:PTHR11753 HOVERGEN:HBG050517 KO:K12394 OrthoDB:EOG469QVZ
OMA:MMQFMLL CTD:8905 EMBL:AB015320 EMBL:AF251295 EMBL:BT006738
EMBL:BC001117 EMBL:BC071867 EMBL:AF091077 IPI:IPI00922006
RefSeq:NP_003907.3 UniGene:Hs.653504 ProteinModelPortal:P56377
SMR:P56377 STRING:P56377 PhosphoSite:P56377 DMDM:3023308
PaxDb:P56377 PRIDE:P56377 DNASU:8905 Ensembl:ENST00000329235
GeneID:8905 KEGG:hsa:8905 UCSC:uc004cxi.3 GeneCards:GC0XM015843
HGNC:HGNC:560 MIM:300629 MIM:300630 neXtProt:NX_P56377
Orphanet:85335 PharmGKB:PA24851 PhylomeDB:P56377 GenomeRNAi:8905
NextBio:33457 ArrayExpress:P56377 Bgee:P56377 CleanEx:HS_AP1S2
Genevestigator:P56377 GermOnline:ENSG00000182287 Uniprot:P56377
Length = 157
Score = 265 (98.3 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 51/108 (47%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE L GE++ETS+ VLK + L +P R +LE+
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEEAETP-RSVLEE 153
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>UNIPROTKB|K7GMZ5 [details] [associations]
symbol:LOC100517795 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GeneTree:ENSGT00530000062839 EMBL:FP102132
RefSeq:XP_003135001.2 Ensembl:ENSSSCT00000033705 GeneID:100517795
Uniprot:K7GMZ5
Length = 157
Score = 265 (98.3 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 51/108 (47%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE L GE++ETS+ VLK + L +P R +LE+
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEEAETP-RSVLEE 153
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>UNIPROTKB|K7GNH2 [details] [associations]
symbol:LOC100517795 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GeneTree:ENSGT00530000062839 EMBL:FP102132
Ensembl:ENSSSCT00000034878 Uniprot:K7GNH2
Length = 156
Score = 265 (98.3 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 50/108 (46%), Positives = 71/108 (65%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE L GE++ETS+ VLK + L W + ED
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQESQNEEWGGLSED 154
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>UNIPROTKB|F1NHS7 [details] [associations]
symbol:AP1S2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 OMA:MMQFMLL EMBL:AADN02011332
IPI:IPI00580763 Ensembl:ENSGALT00000026710 ArrayExpress:F1NHS7
Uniprot:F1NHS7
Length = 145
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAI 134
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>UNIPROTKB|F1NHS8 [details] [associations]
symbol:AP1S2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 EMBL:AADN02011332 IPI:IPI00576251
ProteinModelPortal:F1NHS8 Ensembl:ENSGALT00000026709
ArrayExpress:F1NHS8 Uniprot:F1NHS8
Length = 142
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAI 134
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>UNIPROTKB|Q3ZBS3 [details] [associations]
symbol:AP1S2 "AP-1 complex subunit sigma-2" species:9913
"Bos taurus" [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0005905 "coated pit" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0005794 GO:GO:0006886 GO:GO:0030117
GO:GO:0008565 GO:GO:0006897 GO:GO:0005905 GO:GO:0030659
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
HOGENOM:HOG000185227 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
HOVERGEN:HBG050517 KO:K12394 HSSP:P62743 OMA:MMQFMLL EMBL:BC103139
IPI:IPI00760470 RefSeq:NP_001035681.1 UniGene:Bt.49367
ProteinModelPortal:Q3ZBS3 SMR:Q3ZBS3 Ensembl:ENSBTAT00000027212
GeneID:616331 KEGG:bta:616331 CTD:8905 NextBio:20900083
ArrayExpress:Q3ZBS3 Uniprot:Q3ZBS3
Length = 160
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAI 134
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>UNIPROTKB|A6NH01 [details] [associations]
symbol:AP1S2 "AP-1 complex subunit sigma-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 HOGENOM:HOG000185227 PANTHER:PTHR11753
HOVERGEN:HBG050517 HGNC:HGNC:560 EMBL:AC004106 IPI:IPI00009244
ProteinModelPortal:A6NH01 SMR:A6NH01 STRING:A6NH01 PRIDE:A6NH01
Ensembl:ENST00000380291 ArrayExpress:A6NH01 Bgee:A6NH01
Uniprot:A6NH01
Length = 160
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAI 134
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>UNIPROTKB|B4DSU4 [details] [associations]
symbol:AP1S2 "AP-1 complex subunit sigma-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 HOGENOM:HOG000185227 PANTHER:PTHR11753
HOVERGEN:HBG050517 UniGene:Hs.653504 HGNC:HGNC:560 EMBL:AC004106
IPI:IPI00009244 EMBL:AK299921 SMR:B4DSU4 STRING:B4DSU4
Ensembl:ENST00000421527 UCSC:uc011mit.2 Uniprot:B4DSU4
Length = 202
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 89 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 148
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 149 EKAYFILDEFLLGGEVQETSKKNVLKAI 176
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 66 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 125
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 126 HRYVELLDKYFGSVCELDIIFNFEK 150
>UNIPROTKB|B7Z3M9 [details] [associations]
symbol:AP1S2 "AP-1 complex subunit sigma-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 HOVERGEN:HBG050517
UniGene:Hs.653504 HGNC:HGNC:560 EMBL:AC004106 EMBL:AK296135
IPI:IPI00646398 SMR:B7Z3M9 STRING:B7Z3M9 Ensembl:ENST00000545766
UCSC:uc010nex.3 Uniprot:B7Z3M9
Length = 195
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 89 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 148
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 149 EKAYFILDEFLLGGEVQETSKKNVLKAI 176
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 66 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 125
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 126 HRYVELLDKYFGSVCELDIIFNFEK 150
>UNIPROTKB|H7BZG6 [details] [associations]
symbol:AP1S2 "AP-1 complex subunit sigma-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 HGNC:HGNC:560 EMBL:AC004106
ProteinModelPortal:H7BZG6 PRIDE:H7BZG6 Ensembl:ENST00000450644
Uniprot:H7BZG6
Length = 146
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 40 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 99
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 100 EKAYFILDEFLLGGEVQETSKKNVLKAI 127
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 17 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 76
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 77 HRYVELLDKYFGSVCELDIIFNFEK 101
>UNIPROTKB|K7GRW0 [details] [associations]
symbol:LOC100517795 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GeneTree:ENSGT00530000062839 EMBL:FP102132
Ensembl:ENSSSCT00000033858 Uniprot:K7GRW0
Length = 153
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAI 134
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>MGI|MGI:1889383 [details] [associations]
symbol:Ap1s2 "adaptor-related protein complex 1, sigma 2
subunit" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005905 "coated pit" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 MGI:MGI:1889383 GO:GO:0005794 GO:GO:0006886
GO:GO:0030117 GO:GO:0008565 GO:GO:0006897 GO:GO:0005905
GO:GO:0030659 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 HOVERGEN:HBG050517 OrthoDB:EOG469QVZ
EMBL:AK005223 EMBL:AK045558 EMBL:AK047724 EMBL:BX469932
IPI:IPI00321374 UniGene:Mm.426783 ProteinModelPortal:Q9DB50
SMR:Q9DB50 IntAct:Q9DB50 STRING:Q9DB50 PaxDb:Q9DB50 PRIDE:Q9DB50
Ensembl:ENSMUST00000069041 UCSC:uc009uuy.1 InParanoid:B1B0F4
Bgee:Q9DB50 Genevestigator:Q9DB50 GermOnline:ENSMUSG00000031367
Uniprot:Q9DB50
Length = 160
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAI 134
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>RGD|1561862 [details] [associations]
symbol:Ap1s2 "adaptor-related protein complex 1, sigma 2
subunit" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 RGD:1561862
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
OrthoDB:EOG469QVZ IPI:IPI00952014 ProteinModelPortal:D4A5J7
SMR:D4A5J7 Ensembl:ENSRNOT00000066270 UCSC:RGD:1561862
ArrayExpress:D4A5J7 Uniprot:D4A5J7
Length = 160
Score = 264 (98.0 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE++ETS+ VLK +
Sbjct: 107 EKAYFILDEFLLGGEVQETSKKNVLKAI 134
Score = 235 (87.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>GENEDB_PFALCIPARUM|PF11_0187 [details] [associations]
symbol:PF11_0187 "clathrin assembly protein
AP19, putative" species:5833 "Plasmodium falciparum" [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030131 "clathrin
adaptor complex" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 GO:GO:0016192 GO:GO:0008565 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
HOGENOM:HOG000185227 PANTHER:PTHR11753 ProtClustDB:CLSZ2432660
EMBL:AE014186 RefSeq:XP_001347858.1 ProteinModelPortal:Q8III7
PRIDE:Q8III7 EnsemblProtists:PF11_0187:mRNA GeneID:810734
KEGG:pfa:PF11_0187 EuPathDB:PlasmoDB:PF3D7_1118100 OMA:KRATLAY
Uniprot:Q8III7
Length = 155
Score = 263 (97.6 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 43/86 (50%), Positives = 68/86 (79%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF ++R +K+V++RYA L+F C+D DN L LE IH++VE+L++YF NVCELDL+FNF
Sbjct: 48 NFVEWREYKLVFKRYASLFFIACIDKGDNELITLEIIHHYVEILDKYFGNVCELDLIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLK 171
+K Y ++DE+ + GE++E+S+ +L+
Sbjct: 108 HKAYYLLDEILVTGEMQESSKKTILR 133
Score = 247 (92.0 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 44/83 (53%), Positives = 60/83 (72%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
EK K+I E + R K NFVE+R +K+V++RYA L+F C+D DN L LE IH+
Sbjct: 27 EKAKIIRETSQITLNRTPKLCNFVEWREYKLVFKRYASLFFIACIDKGDNELITLEIIHH 86
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
+VE+L++YF NVCELDL+FNF+K
Sbjct: 87 YVEILDKYFGNVCELDLIFNFHK 109
>UNIPROTKB|Q8III7 [details] [associations]
symbol:PF11_0187 "Clathrin assembly protein AP19, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0030131 "clathrin adaptor complex"
evidence=ISS] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 GO:GO:0016192 GO:GO:0008565 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
HOGENOM:HOG000185227 PANTHER:PTHR11753 ProtClustDB:CLSZ2432660
EMBL:AE014186 RefSeq:XP_001347858.1 ProteinModelPortal:Q8III7
PRIDE:Q8III7 EnsemblProtists:PF11_0187:mRNA GeneID:810734
KEGG:pfa:PF11_0187 EuPathDB:PlasmoDB:PF3D7_1118100 OMA:KRATLAY
Uniprot:Q8III7
Length = 155
Score = 263 (97.6 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 43/86 (50%), Positives = 68/86 (79%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF ++R +K+V++RYA L+F C+D DN L LE IH++VE+L++YF NVCELDL+FNF
Sbjct: 48 NFVEWREYKLVFKRYASLFFIACIDKGDNELITLEIIHHYVEILDKYFGNVCELDLIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLK 171
+K Y ++DE+ + GE++E+S+ +L+
Sbjct: 108 HKAYYLLDEILVTGEMQESSKKTILR 133
Score = 247 (92.0 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 44/83 (53%), Positives = 60/83 (72%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
EK K+I E + R K NFVE+R +K+V++RYA L+F C+D DN L LE IH+
Sbjct: 27 EKAKIIRETSQITLNRTPKLCNFVEWREYKLVFKRYASLFFIACIDKGDNELITLEIIHH 86
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
+VE+L++YF NVCELDL+FNF+K
Sbjct: 87 YVEILDKYFGNVCELDLIFNFHK 109
>ZFIN|ZDB-GENE-050417-222 [details] [associations]
symbol:ap1s3a "adaptor-related protein complex 1,
sigma 3 subunit, a" species:7955 "Danio rerio" [GO:0030117
"membrane coat" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 ZFIN:ZDB-GENE-050417-222 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753
HOVERGEN:HBG050517 EMBL:BC093241 IPI:IPI00570198
RefSeq:NP_001017720.1 UniGene:Dr.90055 ProteinModelPortal:Q567B7
SMR:Q567B7 GeneID:550415 KEGG:dre:550415 CTD:550415
OrthoDB:EOG46HGC0 NextBio:20879663 Uniprot:Q567B7
Length = 154
Score = 263 (97.6 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 46/93 (49%), Positives = 66/93 (70%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +R+ KIVYRRYA LYFC ++ +DN L L+ +H +VE+L++YF NVCELD++FNF
Sbjct: 48 NFLPWRDLKIVYRRYASLYFCCGLEQDDNELLTLDILHRYVELLDQYFGNVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLRS 178
K Y ++DE + GE++ETS+ V K + S
Sbjct: 108 EKAYFILDEFVIGGEVQETSKASVAKSIEEAES 140
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 42/85 (49%), Positives = 62/85 (72%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D +K+K+I ++ +V R K NF+ +R+ KIVYRRYA LYFC ++ +DN L L+ +
Sbjct: 25 DRDKRKIIRDLTQMVLSRPPKACNFLPWRDLKIVYRRYASLYFCCGLEQDDNELLTLDIL 84
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF NVCELD++FNF K
Sbjct: 85 HRYVELLDQYFGNVCELDIIFNFEK 109
>POMBASE|SPAP27G11.06c [details] [associations]
symbol:vas2 "AP-1 adaptor complex sigma subunit Aps1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IMP] [GO:0016197
"endosomal transport" evidence=IMP] [GO:0030121 "AP-1 adaptor
complex" evidence=IDA] [GO:0030276 "clathrin binding" evidence=ISO]
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 PomBase:SPAP27G11.06c GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329670 GO:GO:0016192 GO:GO:0008565
GO:GO:0005768 GO:GO:0016197 GO:GO:0030121 GO:GO:0030276
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
HOGENOM:HOG000185227 PANTHER:PTHR11753 HSSP:P62743
RefSeq:NP_593410.1 ProteinModelPortal:Q9P7N2 STRING:Q9P7N2
EnsemblFungi:SPAP27G11.06c.1 GeneID:2542885 KEGG:spo:SPAP27G11.06c
OMA:MMQFMLL OrthoDB:EOG45MRFT NextBio:20803925 Uniprot:Q9P7N2
Length = 162
Score = 260 (96.6 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 48/85 (56%), Positives = 65/85 (76%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +++ KIVYRRYA L+F ++ +DN L LE IH FVE L++YF NVCELDL+FNF
Sbjct: 49 NFVEYKGEKIVYRRYASLFFVCGIEQDDNELIILEVIHKFVECLDKYFGNVCELDLIFNF 108
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVL 170
K Y V++E+ LAGE++E+S+T VL
Sbjct: 109 EKAYYVMEELLLAGELQESSKTNVL 133
Score = 236 (88.1 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 45/83 (54%), Positives = 59/83 (71%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
E+ K+I +V ++V R K NFVE++ KIVYRRYA L+F ++ +DN L LE IH
Sbjct: 28 ERAKIIRDVSSLVITRKPKMCNFVEYKGEKIVYRRYASLFFVCGIEQDDNELIILEVIHK 87
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
FVE L++YF NVCELDL+FNF K
Sbjct: 88 FVECLDKYFGNVCELDLIFNFEK 110
>TAIR|locus:2083579 [details] [associations]
symbol:AT3G09360 species:3702 "Arabidopsis thaliana"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0010440 "stomatal lineage
progression" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR000812 InterPro:IPR011665
InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741 PRINTS:PR00685
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0008270 GO:GO:0006352 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG1405 PANTHER:PTHR11618
KO:K15196 OMA:YGCDGDE EMBL:AK226688 IPI:IPI00523177
RefSeq:NP_187547.2 UniGene:At.53231 ProteinModelPortal:Q0WVQ3
STRING:Q0WVQ3 EnsemblPlants:AT3G09360.1 GeneID:820092
KEGG:ath:AT3G09360 TAIR:At3g09360 HOGENOM:HOG000265442
InParanoid:Q0WVQ3 PhylomeDB:Q0WVQ3 ProtClustDB:CLSN2681133
Genevestigator:Q0WVQ3 Uniprot:Q0WVQ3
Length = 604
Score = 246 (91.7 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 67/208 (32%), Positives = 112/208 (53%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNCK 247
ILE+ +E+ F +NA G + A G+ V S ++ G+ SRE +
Sbjct: 29 ILENFHFSTEVTFVKNAAGQSQASGNIVRS------------VQSGIT-SSRERRFRIAR 75
Query: 248 RNISSLCNQLRLNQH---CLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSH 304
+ +L + L + + + ++MA+ +N TKGRR LV A+C+Y+TCR +
Sbjct: 76 DELMNLKDALGIGDERDDVIVIAAKFFEMAVEQNFTKGRRTELVQASCLYLTCRELNIAL 135
Query: 305 LLIDFSELLQICIFELGRTYLRLSQALCI----SIPSM-DPCLYVLRYSNRLDFGAKTHE 359
LLIDFS L++ ++ELG YL+L + L + + + DP +++ R+SN L G +
Sbjct: 136 LLIDFSSYLRVSVYELGSVYLQLCEMLYLVENRNYEKLVDPSIFMDRFSNSLLKGKNNKD 195
Query: 360 VTMTALRILQRMKKDMLHSGRRPNGLIG 387
V TA I+ MK+D + +GR+P+G+ G
Sbjct: 196 VVATARDIIASMKRDWIQTGRKPSGICG 223
Score = 81 (33.6 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSL-DFTVDVNTGEMS-TEQKSAPRIIENLEITSS 587
TA EA+ + L +K++S+ INYDVL+SL D + + + S TE + EN E+ S+
Sbjct: 494 TAVEAVRRTLDKKRLSSVINYDVLESLFDTSAPEKSPKRSKTETDIEKKKEENKEMKSN 552
>UNIPROTKB|Q1JQ98 [details] [associations]
symbol:AP1S1 "AP-1 complex subunit sigma-1A" species:9913
"Bos taurus" [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0005905 "coated pit" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0009615 "response to virus"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0008565 GO:GO:0006897
GO:GO:0005905 GO:GO:0009615 GO:GO:0030659 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 HOGENOM:HOG000185227
OMA:MMRFMLL PANTHER:PTHR11753 EMBL:BC116132 IPI:IPI00694717
RefSeq:NP_001070578.1 UniGene:Bt.4315 ProteinModelPortal:Q1JQ98
SMR:Q1JQ98 STRING:Q1JQ98 Ensembl:ENSBTAT00000019237 GeneID:768053
KEGG:bta:768053 CTD:1174 GeneTree:ENSGT00530000062839
HOVERGEN:HBG050517 InParanoid:Q1JQ98 KO:K12394 OrthoDB:EOG469QVZ
NextBio:20918408 Uniprot:Q1JQ98
Length = 157
Score = 258 (95.9 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/108 (44%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ K+VY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 47 SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE + G++++TS+ VLK + L SP R +LE+
Sbjct: 107 EKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP-RSVLEE 153
Score = 240 (89.5 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 42/85 (49%), Positives = 62/85 (72%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K++ E+ VV R K +F+E+R+ K+VY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 84 HRYVELLDKYFGSVCELDIIFNFEK 108
>UNIPROTKB|E2RLN5 [details] [associations]
symbol:AP1S1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0009615 "response to virus" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 GO:GO:0009615 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 CTD:1174
GeneTree:ENSGT00530000062839 KO:K12394 EMBL:AAEX03004263
RefSeq:XP_003434784.1 ProteinModelPortal:E2RLN5
Ensembl:ENSCAFT00000024250 GeneID:100688000 KEGG:cfa:100688000
Uniprot:E2RLN5
Length = 158
Score = 258 (95.9 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/108 (44%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ K+VY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 48 SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE + G++++TS+ VLK + L SP R +LE+
Sbjct: 108 EKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP-RSVLEE 154
Score = 240 (89.5 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 42/85 (49%), Positives = 62/85 (72%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K++ E+ VV R K +F+E+R+ K+VY+RYA LYFC ++ DN L LE I
Sbjct: 25 DKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 84
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 85 HRYVELLDKYFGSVCELDIIFNFEK 109
>UNIPROTKB|E2RTH1 [details] [associations]
symbol:AP1S1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
OMA:MMRFMLL PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
EMBL:AAEX03004263 Ensembl:ENSCAFT00000022058 Uniprot:E2RTH1
Length = 180
Score = 258 (95.9 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/108 (44%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ K+VY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 70 SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNF 129
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE + G++++TS+ VLK + L SP R +LE+
Sbjct: 130 EKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP-RSVLEE 176
Score = 240 (89.5 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 42/85 (49%), Positives = 62/85 (72%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K++ E+ VV R K +F+E+R+ K+VY+RYA LYFC ++ DN L LE I
Sbjct: 47 DKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 106
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 107 HRYVELLDKYFGSVCELDIIFNFEK 131
>UNIPROTKB|P61966 [details] [associations]
symbol:AP1S1 "AP-1 complex subunit sigma-1A" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0005905 "coated pit" evidence=IEA] [GO:0030121
"AP-1 adaptor complex" evidence=TAS] [GO:0030130 "clathrin coat of
trans-Golgi network vesicle" evidence=NAS] [GO:0006898
"receptor-mediated endocytosis" evidence=TAS] [GO:0009615 "response
to virus" evidence=IEP] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006892 "post-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=TAS]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=TAS]
[GO:0032588 "trans-Golgi network membrane" evidence=TAS]
[GO:0050690 "regulation of defense response to virus by virus"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0005829 GO:GO:0006898 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0050690 GO:GO:0016032
GO:GO:0005765 GO:GO:0032588 GO:GO:0019886 GO:GO:0008565
GO:GO:0005905 GO:GO:0009615 GO:GO:0030121 GO:GO:0016044
GO:GO:0006892 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 PANTHER:PTHR11753 CTD:1174 HOVERGEN:HBG050517
KO:K12394 OrthoDB:EOG469QVZ EMBL:AB015319 EMBL:BT006779
EMBL:AK312151 EMBL:AC004876 EMBL:CH471197 EMBL:BC003561
IPI:IPI00100559 IPI:IPI00152898 RefSeq:NP_001274.1
UniGene:Hs.489365 ProteinModelPortal:P61966 SMR:P61966
STRING:P61966 PhosphoSite:P61966 DMDM:48428719 PaxDb:P61966
PRIDE:P61966 DNASU:1174 Ensembl:ENST00000337619
Ensembl:ENST00000443943 GeneID:1174 KEGG:hsa:1174 UCSC:uc003uxv.4
GeneCards:GC07P100797 HGNC:HGNC:559 MIM:603531 neXtProt:NX_P61966
Orphanet:171851 PharmGKB:PA24850 InParanoid:P61966 GenomeRNAi:1174
NextBio:4850 Bgee:P61966 CleanEx:HS_AP1S1 Genevestigator:P61966
GermOnline:ENSG00000106367 Uniprot:P61966
Length = 158
Score = 258 (95.9 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/108 (44%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ K+VY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 48 SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE + G++++TS+ VLK + L SP R +LE+
Sbjct: 108 EKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP-RSVLEE 154
Score = 240 (89.5 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 42/85 (49%), Positives = 62/85 (72%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K++ E+ VV R K +F+E+R+ K+VY+RYA LYFC ++ DN L LE I
Sbjct: 25 DKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 84
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 85 HRYVELLDKYFGSVCELDIIFNFEK 109
>MGI|MGI:1098244 [details] [associations]
symbol:Ap1s1 "adaptor protein complex AP-1, sigma 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=NAS] [GO:0005905 "coated
pit" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=NAS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=NAS;TAS] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030121 "AP-1 adaptor complex"
evidence=NAS] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 MGI:MGI:1098244 GO:GO:0006886
GO:GO:0016192 GO:GO:0008565 GO:GO:0006897 GO:GO:0005905
GO:GO:0009615 GO:GO:0005802 GO:GO:0030121 PDB:1W63 PDBsum:1W63
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
HOGENOM:HOG000185227 OMA:MMRFMLL PANTHER:PTHR11753 CTD:1174
GeneTree:ENSGT00530000062839 HOVERGEN:HBG050517 KO:K12394
OrthoDB:EOG469QVZ EMBL:M62418 EMBL:AK002225 EMBL:BC052692
IPI:IPI00118026 PIR:A40535 RefSeq:NP_031483.1 UniGene:Mm.833
ProteinModelPortal:P61967 SMR:P61967 IntAct:P61967 STRING:P61967
PhosphoSite:P61967 PaxDb:P61967 PRIDE:P61967
Ensembl:ENSMUST00000111080 GeneID:11769 KEGG:mmu:11769
UCSC:uc009abm.1 InParanoid:P61967 EvolutionaryTrace:P61967
NextBio:279541 Bgee:P61967 CleanEx:MM_AP1S1 Genevestigator:P61967
GermOnline:ENSMUSG00000004849 Uniprot:P61967
Length = 158
Score = 258 (95.9 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/108 (44%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ K+VY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 48 SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE + G++++TS+ VLK + L SP R +LE+
Sbjct: 108 EKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP-RSVLEE 154
Score = 240 (89.5 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 42/85 (49%), Positives = 62/85 (72%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K++ E+ VV R K +F+E+R+ K+VY+RYA LYFC ++ DN L LE I
Sbjct: 25 DKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 84
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 85 HRYVELLDKYFGSVCELDIIFNFEK 109
>RGD|1305911 [details] [associations]
symbol:Ap1s1 "adaptor-related protein complex 1, sigma 1
subunit" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA;ISO] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 RGD:1305911 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 GO:GO:0009615
EMBL:CH473973 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753 CTD:1174
GeneTree:ENSGT00530000062839 HOVERGEN:HBG050517 KO:K12394
OrthoDB:EOG469QVZ UniGene:Rn.11795 UniGene:Rn.225229 EMBL:BC169070
IPI:IPI00363619 RefSeq:NP_001101801.2 SMR:B5DFI3 STRING:B5DFI3
Ensembl:ENSRNOT00000001918 GeneID:360785 KEGG:rno:360785
UCSC:RGD:1305911 NextBio:674083 Genevestigator:B5DFI3
Uniprot:B5DFI3
Length = 158
Score = 258 (95.9 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/108 (44%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ K+VY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 48 SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE + G++++TS+ VLK + L SP R +LE+
Sbjct: 108 EKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP-RSVLEE 154
Score = 240 (89.5 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 42/85 (49%), Positives = 62/85 (72%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K++ E+ VV R K +F+E+R+ K+VY+RYA LYFC ++ DN L LE I
Sbjct: 25 DKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 84
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 85 HRYVELLDKYFGSVCELDIIFNFEK 109
>UNIPROTKB|I3LVB8 [details] [associations]
symbol:AP1S1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009615 "response to virus" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 GO:GO:0009615
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 Ensembl:ENSSSCT00000032579 OMA:FGSICEL
Uniprot:I3LVB8
Length = 157
Score = 257 (95.5 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 47/108 (43%), Positives = 74/108 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ K+VY+RYA LYFC ++ DN L LE IH +VE+L++YF ++CELD++FNF
Sbjct: 47 SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSICELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILED 191
K Y ++DE + G++++TS+ VLK + L SP R +LE+
Sbjct: 107 EKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP-RSVLEE 153
Score = 239 (89.2 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 41/85 (48%), Positives = 62/85 (72%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K++ E+ VV R K +F+E+R+ K+VY+RYA LYFC ++ DN L LE I
Sbjct: 24 DKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF ++CELD++FNF K
Sbjct: 84 HRYVELLDKYFGSICELDIIFNFEK 108
>ZFIN|ZDB-GENE-040912-62 [details] [associations]
symbol:ap1s3b "adaptor-related protein complex 1,
sigma 3 subunit, b" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 ZFIN:ZDB-GENE-040912-62 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 eggNOG:COG5030 HOGENOM:HOG000185227
PANTHER:PTHR11753 HOVERGEN:HBG050517 OrthoDB:EOG469QVZ KO:K12395
OMA:TSKKTAV EMBL:BC081385 EMBL:BC150444 IPI:IPI00490883
RefSeq:NP_001004635.1 UniGene:Dr.123446 SMR:Q66IE3 STRING:Q66IE3
GeneID:447897 KEGG:dre:447897 CTD:447897 NextBio:20832417
Uniprot:Q66IE3
Length = 154
Score = 256 (95.2 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 44/88 (50%), Positives = 64/88 (72%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF +++ KIVY+RYA LYFC ++ DN L LE +H +VE+L++YF NVCELD++FNF
Sbjct: 48 NFMHWKDLKIVYKRYASLYFCCGLENQDNELLALEILHRYVELLDKYFGNVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE + GEI+ETS+ + K +
Sbjct: 108 EKAYFILDEFLMGGEIQETSKQSIAKSI 135
Score = 221 (82.9 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 37/83 (44%), Positives = 61/83 (73%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
+++K+++++ +V R + NF+ +++ KIVY+RYA LYFC ++ DN L LE +H
Sbjct: 27 DRKKIVKDMTTMVLARKPRTCNFMHWKDLKIVYKRYASLYFCCGLENQDNELLALEILHR 86
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
+VE+L++YF NVCELD++FNF K
Sbjct: 87 YVELLDKYFGNVCELDIIFNFEK 109
>UNIPROTKB|H7C1E4 [details] [associations]
symbol:AP1S1 "AP-1 complex subunit sigma-1A" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 OMA:MMRFMLL PANTHER:PTHR11753 EMBL:AC004876
HGNC:HGNC:559 ProteinModelPortal:H7C1E4 Ensembl:ENST00000429457
Uniprot:H7C1E4
Length = 191
Score = 255 (94.8 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 42/88 (47%), Positives = 66/88 (75%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ K+VY+RYA LYFC ++ DN L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 90 SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNF 149
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE + G++++TS+ VLK +
Sbjct: 150 EKAYFILDEFLMGGDVQDTSKKSVLKAI 177
Score = 240 (89.5 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 42/85 (49%), Positives = 62/85 (72%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K++ E+ VV R K +F+E+R+ K+VY+RYA LYFC ++ DN L LE I
Sbjct: 67 DKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 126
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 127 HRYVELLDKYFGSVCELDIIFNFEK 151
>ZFIN|ZDB-GENE-030131-7909 [details] [associations]
symbol:zgc:162858 "zgc:162858" species:7955 "Danio
rerio" [GO:0030117 "membrane coat" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989
ZFIN:ZDB-GENE-030131-7909 GO:GO:0006886 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 PANTHER:PTHR11753 HOVERGEN:HBG050517 EMBL:BC134124
IPI:IPI00844894 RefSeq:NP_001082809.1 UniGene:Dr.151234
UniGene:Dr.154260 UniGene:Dr.46793 UniGene:Dr.78288
ProteinModelPortal:A3KP21 SMR:A3KP21 GeneID:337771 KEGG:dre:337771
NextBio:20812409 Uniprot:A3KP21
Length = 181
Score = 255 (94.8 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 48/111 (43%), Positives = 70/111 (63%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA LYFC ++ DN L LE IH +VE+L++YF +VC LD++FNF
Sbjct: 71 SFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCGLDIIFNF 130
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRV--LRSRCGPSPWRHILEDSVI 194
K Y ++DE L GE +ETS+ VLK + L W + D ++
Sbjct: 131 EKAYFILDEFLLGGEAQETSKKNVLKAIEQADLLQESQHEDWGGLANDEIL 181
Score = 228 (85.3 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 42/85 (49%), Positives = 59/85 (69%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D EK+K+ E+ V R K +F+E+R+ KIVY+RYA LYFC ++ DN L LE I
Sbjct: 48 DKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 107
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VC LD++FNF K
Sbjct: 108 HRYVELLDKYFGSVCGLDIIFNFEK 132
>UNIPROTKB|A5PK31 [details] [associations]
symbol:AP1S3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 HOVERGEN:HBG050517 OrthoDB:EOG469QVZ
CTD:130340 KO:K12395 OMA:TSKKTAV EMBL:DAAA02006041 EMBL:BC142333
IPI:IPI00868488 RefSeq:NP_001096766.1 UniGene:Bt.61107 SMR:A5PK31
STRING:A5PK31 Ensembl:ENSBTAT00000014784 GeneID:540693
KEGG:bta:540693 InParanoid:A5PK31 NextBio:20878777 Uniprot:A5PK31
Length = 154
Score = 253 (94.1 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 43/88 (48%), Positives = 63/88 (71%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++ K+VY+RYA LYFC V+ DN L LE +H +VE+L++YF NVCELD++FNF
Sbjct: 48 SFVDWKELKLVYKRYASLYFCCAVENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE + GEI+ETS+ +K +
Sbjct: 108 EKAYFILDEFIIGGEIQETSKKSAVKAI 135
Score = 232 (86.7 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 39/85 (45%), Positives = 61/85 (71%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K+ E+ ++ R + ++FV+++ K+VY+RYA LYFC V+ DN L LE +
Sbjct: 25 DKERKKITREIVQIILSRGQRTSSFVDWKELKLVYKRYASLYFCCAVENQDNELLTLEIV 84
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF NVCELD++FNF K
Sbjct: 85 HRYVELLDKYFGNVCELDIIFNFEK 109
>UNIPROTKB|F1Q0U8 [details] [associations]
symbol:AP1S3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GeneTree:ENSGT00530000062839 OMA:TSKKTAV
EMBL:AAEX03018198 EMBL:AAEX03018197 Ensembl:ENSCAFT00000025694
Uniprot:F1Q0U8
Length = 164
Score = 253 (94.1 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 43/88 (48%), Positives = 63/88 (71%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++ K+VY+RYA LYFC V+ DN L LE +H +VE+L++YF NVCELD++FNF
Sbjct: 58 SFVDWKELKLVYKRYASLYFCCAVENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNF 117
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE + GEI+ETS+ +K +
Sbjct: 118 EKAYFILDEFIMGGEIQETSKKSAVKAI 145
Score = 232 (86.7 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 39/85 (45%), Positives = 61/85 (71%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K+ E+ ++ R + ++FV+++ K+VY+RYA LYFC V+ DN L LE +
Sbjct: 35 DKERKKITREIVQIILSRGQRTSSFVDWKELKLVYKRYASLYFCCAVENQDNELLTLEIV 94
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF NVCELD++FNF K
Sbjct: 95 HRYVELLDKYFGNVCELDIIFNFEK 119
>ASPGD|ASPL0000068146 [details] [associations]
symbol:AN7682 species:162425 "Emericella nidulans"
[GO:0006896 "Golgi to vacuole transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0030121 "AP-1 adaptor complex"
evidence=IEA] [GO:0030276 "clathrin binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 GO:GO:0008565 EMBL:BN001304
GO:GO:0006896 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
OMA:MMRFMLL PANTHER:PTHR11753 EnsemblFungi:CADANIAT00000809
Uniprot:C8VC40
Length = 156
Score = 237 (88.5 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 41/86 (47%), Positives = 63/86 (73%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF ++++ K+VYRRYA L+F DN L LE +H +VE +++Y+ NVCELD++FNF
Sbjct: 49 NFLEYKDTKVVYRRYASLFFIAGCASTDNELITLEIVHRYVEQMDKYYGNVCELDIIFNF 108
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLK 171
K Y ++DE+ LAGE++E+S+ VL+
Sbjct: 109 QKAYFILDELLLAGEMQESSKKNVLR 134
Score = 208 (78.3 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 38/83 (45%), Positives = 57/83 (68%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
EK K+I++V +V R + NF+E+++ K+VYRRYA L+F DN L LE +H
Sbjct: 28 EKAKIIKDVTQLVLSRRTRMCNFLEYKDTKVVYRRYASLFFIAGCASTDNELITLEIVHR 87
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
+VE +++Y+ NVCELD++FNF K
Sbjct: 88 YVEQMDKYYGNVCELDIIFNFQK 110
Score = 37 (18.1 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 617 KSNELPRVI--KECLEDADLEEDM 638
K N L R I ++ LED ++EED+
Sbjct: 129 KKNVL-RCISQQDSLEDMEVEEDV 151
>RGD|1311772 [details] [associations]
symbol:Ap1s3 "adaptor-related protein complex 1, sigma 3
subunit" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 RGD:1311772
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
OMA:TSKKTAV IPI:IPI00360730 UniGene:Rn.33461
Ensembl:ENSRNOT00000032538 NextBio:691061 Uniprot:F1LWX7
Length = 153
Score = 251 (93.4 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 42/88 (47%), Positives = 63/88 (71%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++ K+VY+RYA LYFC ++ DN L LE +H +VE+L++YF NVCELD++FNF
Sbjct: 47 SFIDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE + GEI+ETS+ +K +
Sbjct: 107 EKAYFILDEFIIGGEIQETSKKTAVKAI 134
Score = 227 (85.0 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 38/85 (44%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K+ E+ V R + ++F++++ K+VY+RYA LYFC ++ DN L LE +
Sbjct: 24 DKERKKITREIIQTVLSRGHRTSSFIDWKELKLVYKRYASLYFCCAIENQDNELLTLEIV 83
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF NVCELD++FNF K
Sbjct: 84 HRYVELLDKYFGNVCELDIIFNFEK 108
>MGI|MGI:1891304 [details] [associations]
symbol:Ap1s3 "adaptor-related protein complex AP-1, sigma 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989
MGI:MGI:1891304 GO:GO:0005794 GO:GO:0006886 GO:GO:0030117
GO:GO:0008565 GO:GO:0006897 GO:GO:0005905 GO:GO:0030659
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
HOGENOM:HOG000185227 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
HOVERGEN:HBG050517 OrthoDB:EOG469QVZ CTD:130340 KO:K12395
OMA:TSKKTAV EMBL:BC054111 EMBL:BC098237 IPI:IPI00380276
RefSeq:NP_898848.1 UniGene:Mm.32409 ProteinModelPortal:Q7TN05
SMR:Q7TN05 STRING:Q7TN05 PhosphoSite:Q7TN05 PaxDb:Q7TN05
PRIDE:Q7TN05 Ensembl:ENSMUST00000162342 GeneID:252903
KEGG:mmu:252903 UCSC:uc011wnw.1 InParanoid:Q7TN05 NextBio:387387
Bgee:Q7TN05 CleanEx:MM_AP1S3 Genevestigator:Q7TN05 Uniprot:Q7TN05
Length = 154
Score = 251 (93.4 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 42/88 (47%), Positives = 63/88 (71%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++ K+VY+RYA LYFC ++ DN L LE +H +VE+L++YF NVCELD++FNF
Sbjct: 48 SFIDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE + GEI+ETS+ +K +
Sbjct: 108 EKAYFILDEFIIGGEIQETSKKTAVKAI 135
Score = 224 (83.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 37/85 (43%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K+ ++ V R + ++F++++ K+VY+RYA LYFC ++ DN L LE +
Sbjct: 25 DKERKKITRDIIQTVLSRGHRTSSFIDWKELKLVYKRYASLYFCCAIENQDNELLTLEIV 84
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF NVCELD++FNF K
Sbjct: 85 HRYVELLDKYFGNVCELDIIFNFEK 109
>UNIPROTKB|E1BWN8 [details] [associations]
symbol:AP1S3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 CTD:130340 KO:K12395 OMA:TSKKTAV
EMBL:AADN02024142 IPI:IPI00651438 RefSeq:NP_001025179.1
UniGene:Gga.10956 Ensembl:ENSGALT00000008302 GeneID:424807
KEGG:gga:424807 NextBio:20827084 Uniprot:E1BWN8
Length = 154
Score = 249 (92.7 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 40/88 (45%), Positives = 63/88 (71%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F +++ K+VY+RYA LYFC ++ DN L LE +H +VE+L+ YF NVCELD++FNF
Sbjct: 48 SFVDWKDLKLVYKRYASLYFCCAIEDQDNELLTLEVVHRYVELLDRYFGNVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE + GE+++TS+ +K +
Sbjct: 108 EKAYFILDEFIIGGEVQDTSKRSAVKAM 135
Score = 241 (89.9 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 40/85 (47%), Positives = 63/85 (74%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
+ EK+K++ E+ +V R+ K ++FV++++ K+VY+RYA LYFC ++ DN L LE +
Sbjct: 25 EKEKKKIVREIVQIVLSRNQKTSSFVDWKDLKLVYKRYASLYFCCAIEDQDNELLTLEVV 84
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L+ YF NVCELD++FNF K
Sbjct: 85 HRYVELLDRYFGNVCELDIIFNFEK 109
>UNIPROTKB|Q96PC3 [details] [associations]
symbol:AP1S3 "AP-1 complex subunit sigma-3" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=TAS] [GO:0005765 "lysosomal
membrane" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016044
"cellular membrane organization" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=TAS] [GO:0032588 "trans-Golgi network membrane"
evidence=TAS] [GO:0050690 "regulation of defense response to virus
by virus" evidence=TAS] Reactome:REACT_11123 InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0000139 GO:GO:0050690
GO:GO:0016032 GO:GO:0030117 GO:GO:0005765 GO:GO:0032588
GO:GO:0019886 GO:GO:0008565 GO:GO:0006897 GO:GO:0005905
GO:GO:0030659 GO:GO:0016044 GO:GO:0006892 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 HOGENOM:HOG000185227
PANTHER:PTHR11753 HOVERGEN:HBG050517 EMBL:AF393369 EMBL:AK299026
EMBL:AC012512 EMBL:AC093884 EMBL:BC009606 EMBL:BC021898
IPI:IPI00060866 IPI:IPI00654799 IPI:IPI00915398 IPI:IPI00937280
RefSeq:NP_001034658.1 UniGene:Hs.632555 ProteinModelPortal:Q96PC3
SMR:Q96PC3 IntAct:Q96PC3 STRING:Q96PC3 PhosphoSite:Q96PC3
DMDM:21541959 PaxDb:Q96PC3 PRIDE:Q96PC3 Ensembl:ENST00000396654
Ensembl:ENST00000415298 Ensembl:ENST00000423110
Ensembl:ENST00000443700 Ensembl:ENST00000446015 GeneID:130340
KEGG:hsa:130340 UCSC:uc002vnn.3 UCSC:uc010fwx.2 CTD:130340
GeneCards:GC02M224580 HGNC:HGNC:18971 neXtProt:NX_Q96PC3
InParanoid:Q96PC3 KO:K12395 OMA:TSKKTAV PhylomeDB:Q96PC3
GenomeRNAi:130340 NextBio:82726 ArrayExpress:Q96PC3 Bgee:Q96PC3
CleanEx:HS_AP1S3 Genevestigator:Q96PC3 GermOnline:ENSG00000152056
Uniprot:Q96PC3
Length = 154
Score = 249 (92.7 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 42/88 (47%), Positives = 63/88 (71%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++ K+VY+RYA LYFC ++ DN L LE +H +VE+L++YF NVCELD++FNF
Sbjct: 48 SFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE + GEI+ETS+ +K +
Sbjct: 108 EKAYFILDEFIIGGEIQETSKKIAVKAI 135
Score = 230 (86.0 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 38/85 (44%), Positives = 61/85 (71%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K+ E+ ++ R + ++FV+++ K+VY+RYA LYFC ++ DN L LE +
Sbjct: 25 DKERKKITREIVQIILSRGHRTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIV 84
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF NVCELD++FNF K
Sbjct: 85 HRYVELLDKYFGNVCELDIIFNFEK 109
>ZFIN|ZDB-GENE-030131-5448 [details] [associations]
symbol:ap1s2 "adaptor-related protein complex 1,
sigma 2 subunit" species:7955 "Danio rerio" [GO:0030117 "membrane
coat" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 ZFIN:ZDB-GENE-030131-5448 GO:GO:0008565
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
HOGENOM:HOG000185227 PANTHER:PTHR11753 HOVERGEN:HBG050517
EMBL:BC044496 IPI:IPI00975338 UniGene:Dr.33122
ProteinModelPortal:Q803G2 PRIDE:Q803G2 InParanoid:Q803G2
ArrayExpress:Q803G2 Bgee:Q803G2 Uniprot:Q803G2
Length = 181
Score = 248 (92.4 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 45/88 (51%), Positives = 64/88 (72%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++R+ KIVY+RYA L FC V+ +N L LE IH +VE+L++YF +VCELD++FNF
Sbjct: 71 SFLEWRDLKIVYKRYASLCFCCAVEDQENELITLEIIHRYVELLDKYFGSVCELDIIFNF 130
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE L GE +ETS+ VLK +
Sbjct: 131 EKAYYILDEFILGGEAQETSKKNVLKAI 158
Score = 223 (83.6 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 42/85 (49%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D +K+K+ EV +V R K +F+E+R+ KIVY+RYA L FC V+ +N L LE I
Sbjct: 48 DTQKKKISREVIQMVLARKPKMCSFLEWRDLKIVYKRYASLCFCCAVEDQENELITLEII 107
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H +VE+L++YF +VCELD++FNF K
Sbjct: 108 HRYVELLDKYFGSVCELDIIFNFEK 132
>TAIR|locus:2055600 [details] [associations]
symbol:AT2G45100 species:3702 "Arabidopsis thaliana"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0010440 "stomatal
lineage progression" evidence=RCA] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GO:GO:0008270
GO:GO:0006352 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR11618 KO:K15196 IPI:IPI00532450
RefSeq:NP_182035.2 UniGene:At.50139 ProteinModelPortal:F4IW19
SMR:F4IW19 PRIDE:F4IW19 EnsemblPlants:AT2G45100.1 GeneID:819117
KEGG:ath:AT2G45100 OMA:LYITENH Uniprot:F4IW19
Length = 557
Score = 254 (94.5 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 65/208 (31%), Positives = 115/208 (55%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGALRGGLNRESREITLDNCK 247
ILE+ +E+ F +NA G + A G+ + S ++ G++ SRE +
Sbjct: 29 ILENFNFSTEVTFVKNAAGQSQASGNILKS------------VQSGMS-SSRERIIRKAT 75
Query: 248 RNISSLCNQLRLNQH---CLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSH 304
+ +L + L + + + N +++AL N TKGR + LV ++C+Y+TCR +
Sbjct: 76 DELMNLRDALGIGDDRDDVIVMASNFFRIALDHNFTKGRSKELVFSSCLYLTCRQFKLAV 135
Query: 305 LLIDFSELLQICIFELGRTYLRLSQALCISIPS-----MDPCLYVLRYSNRLDFGAKTHE 359
LLIDFS L++ +++LG YL+L L I+ +DP +++ R+SN L GA ++
Sbjct: 136 LLIDFSSYLRVSVYDLGSVYLQLCDMLYITENHNYEKLVDPSIFIPRFSNMLLKGAHNNK 195
Query: 360 VTMTALRILQRMKKDMLHSGRRPNGLIG 387
+ +TA I+ MK+D + +GR+P+G+ G
Sbjct: 196 LVLTATHIIASMKRDWMQTGRKPSGICG 223
Score = 56 (24.8 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSL-DFTVDVNTGEMSTE------QKSAPRIIEN 581
T EA++ M+K KK IN D L+ L D +V+ + TE +K I+EN
Sbjct: 454 TGIEAVDSMVKRKKFRD-INCDYLEELFDASVEKSPKRSKTETVMEKKKKEEHEIVEN 510
>UNIPROTKB|I3L9F4 [details] [associations]
symbol:AP1S3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008565 "protein transporter activity" evidence=IEA]
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GeneTree:ENSGT00530000062839 OMA:TSKKTAV
Ensembl:ENSSSCT00000022629 Uniprot:I3L9F4
Length = 154
Score = 244 (91.0 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 43/89 (48%), Positives = 63/89 (70%)
Query: 86 NFYKFRNFKIVYRR-YAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFN 144
+F ++ K+VY+R YA LYFC V+ DN L LE +H +VE+L++YF NVCELD++FN
Sbjct: 47 SFIDWKELKLVYKRWYASLYFCCAVENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFN 106
Query: 145 FYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
F K Y ++DE + GEI+ETS+ +K +
Sbjct: 107 FEKAYFILDEFIMGGEIQETSKKSAVKAI 135
Score = 222 (83.2 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 38/86 (44%), Positives = 61/86 (70%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRR-YAGLYFCICVDVNDNNLCYLEA 63
D E++K+ E+ ++ R + ++F++++ K+VY+R YA LYFC V+ DN L LE
Sbjct: 24 DKERKKITREIVQIILSRGQRTSSFIDWKELKLVYKRWYASLYFCCAVENQDNELLTLEI 83
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFYK 89
+H +VE+L++YF NVCELD++FNF K
Sbjct: 84 VHRYVELLDKYFGNVCELDIIFNFEK 109
>ASPGD|ASPL0000037776 [details] [associations]
symbol:AN3116 species:162425 "Emericella nidulans"
[GO:0000126 "transcription factor TFIIIB complex" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0003743 "translation initiation
factor activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741
GO:GO:0005634 GO:GO:0045893 GO:GO:0008270 EMBL:BN001306
GO:GO:0006352 EMBL:AACD01000051 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG1405
PANTHER:PTHR11618 KO:K15196 HOGENOM:HOG000198688 OMA:CRKERTH
RefSeq:XP_660720.1 ProteinModelPortal:Q5B8L4 STRING:Q5B8L4
EnsemblFungi:CADANIAT00009960 GeneID:2873798 KEGG:ani:AN3116.2
OrthoDB:EOG4SJ8P6 Uniprot:Q5B8L4
Length = 713
Score = 234 (87.4 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 50/125 (40%), Positives = 80/125 (64%)
Query: 270 LYKMALSRNLTKGRRQILVCAACVYMTCRLE-GTSHLLIDFSELLQICIFELGRTY---- 324
++K+A+ N +GRR V A C+Y+ CR + G + +LIDF+++L I +F+LGRTY
Sbjct: 124 VFKLAVGLNFIQGRRTKTVAAVCLYIACRRQDGNTVMLIDFADVLMINVFKLGRTYKALL 183
Query: 325 --LRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTALRILQRMKKDMLHSGRRP 382
LRL + + P +DP + R++ +L+FG T +V A+RI+QRM +D + +GRRP
Sbjct: 184 DELRLGGNVFLMNP-IDPESLIYRFAKQLEFGPSTMQVASEAVRIVQRMNRDWMTTGRRP 242
Query: 383 NGLIG 387
G+ G
Sbjct: 243 AGICG 247
Score = 62 (26.9 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 529 AKTAGEAIEKMLKEKKISTKINYDVLKSL 557
A T EA +ML+ + S KINY +L++L
Sbjct: 541 ASTPAEATRRMLERRGFSKKINYRLLETL 569
Score = 58 (25.5 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 188 ILEDSVIVSEMQFEENAHGGTSALGHFVSSDSKGGCQGFGGA---LRGGLN 235
++ ++ IVSE+ F E+A G G FV D G L GLN
Sbjct: 82 VVSEANIVSEVTFGESASGAAIVQGSFVGEDQTHSASKAAGQVFKLAVGLN 132
Score = 39 (18.8 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 476 ILTEGEATNKAKLWEVLNREYLTLQ 500
+L E K ++W N++YL Q
Sbjct: 468 LLAPHEVEIKERIWVHENKDYLRTQ 492
>UNIPROTKB|G4MYN9 [details] [associations]
symbol:MGG_11227 "AP-1 complex subunit sigma-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 GO:GO:0008565 GO:GO:0030121
GO:GO:0006896 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 EMBL:CM001232 RefSeq:XP_003714271.1
ProteinModelPortal:G4MYN9 EnsemblFungi:MGG_11227T0 GeneID:2679123
KEGG:mgr:MGG_11227 Uniprot:G4MYN9
Length = 155
Score = 234 (87.4 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 41/86 (47%), Positives = 64/86 (74%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF ++++ KIVYRRYA L+F +DN L LE IH +VE +++Y+ NVCELD++F+F
Sbjct: 49 NFLEYKDTKIVYRRYASLFFIAGCSSDDNELITLEIIHRYVEQMDKYYGNVCELDIIFSF 108
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLK 171
K Y ++DE+ LAGE++E+S+ +L+
Sbjct: 109 TKAYYILDEILLAGEMQESSKKNILR 134
Score = 204 (76.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 37/83 (44%), Positives = 57/83 (68%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
+K K++++V V R + NF+E+++ KIVYRRYA L+F +DN L LE IH
Sbjct: 28 DKAKIVKDVTQAVLARRTRMCNFLEYKDTKIVYRRYASLFFIAGCSSDDNELITLEIIHR 87
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
+VE +++Y+ NVCELD++F+F K
Sbjct: 88 YVEQMDKYYGNVCELDIIFSFTK 110
>UNIPROTKB|Q9Y587 [details] [associations]
symbol:AP4S1 "AP-4 complex subunit sigma-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0005215 "transporter
activity" evidence=TAS] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794 GO:GO:0008565
GO:GO:0005905 GO:GO:0005215 EMBL:CH471078 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 HOGENOM:HOG000185227
PANTHER:PTHR11753 HOVERGEN:HBG050517 Orphanet:280763 CTD:11154
KO:K12403 OMA:KLVYRQY OrthoDB:EOG4NVZMN EMBL:AF155159 EMBL:AB030654
EMBL:BT006701 EMBL:CR457100 EMBL:AK304115 EMBL:BC001259
IPI:IPI00001145 IPI:IPI00020385 RefSeq:NP_001121598.1
RefSeq:NP_001241655.1 RefSeq:NP_001241656.1 RefSeq:NP_001241657.1
RefSeq:NP_001241658.1 RefSeq:NP_009008.2 UniGene:Hs.293411
ProteinModelPortal:Q9Y587 SMR:Q9Y587 IntAct:Q9Y587 STRING:Q9Y587
PhosphoSite:Q9Y587 DMDM:13431288 PaxDb:Q9Y587 PRIDE:Q9Y587
DNASU:11154 Ensembl:ENST00000216366 Ensembl:ENST00000542754
GeneID:11154 KEGG:hsa:11154 UCSC:uc001wqw.4 UCSC:uc001wqy.4
GeneCards:GC14P031494 HGNC:HGNC:575 HPA:HPA039963 MIM:607243
MIM:614067 neXtProt:NX_Q9Y587 PharmGKB:PA24867 BindingDB:Q9Y587
ChiTaRS:AP4S1 GenomeRNAi:11154 NextBio:42409 ArrayExpress:Q9Y587
Bgee:Q9Y587 CleanEx:HS_AP4S1 Genevestigator:Q9Y587
GermOnline:ENSG00000100478 Uniprot:Q9Y587
Length = 144
Score = 229 (85.7 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 51 VDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVD 110
VD+N L E I + + NE C +F ++++FK++YR+YA L+ + V+
Sbjct: 23 VDINKRTLLETEVIKSCLSRSNEQ----C------SFIEYKDFKLIYRQYAALFIVVGVN 72
Query: 111 VNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVL 170
+N + E IHNFVEVL+EYF V ELD++FN KV+ ++DEM L G I ET++ ++L
Sbjct: 73 DTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARIL 132
Query: 171 KELRVL 176
L +L
Sbjct: 133 APLLIL 138
Score = 186 (70.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 37/86 (43%), Positives = 56/86 (65%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
D K+ L+E EV R + +F+E+++FK++YR+YA L+ + V+ +N + E
Sbjct: 24 DINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEF 83
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFYK 89
IHNFVEVL+EYF V ELD++FN K
Sbjct: 84 IHNFVEVLDEYFSRVSELDIMFNLDK 109
>SGD|S000004160 [details] [associations]
symbol:APS1 "Small subunit of the clathrin-associated adaptor
complex AP-1" species:4932 "Saccharomyces cerevisiae" [GO:0006810
"transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA;ISS;IPI] [GO:0005905 "coated pit" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISS;IPI] [GO:0030121 "AP-1 adaptor complex"
evidence=ISS;IPI] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006896 "Golgi to vacuole transport"
evidence=IMP] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 SGD:S000004160 GO:GO:0006886 GO:GO:0008565
GO:GO:0005905 EMBL:BK006945 GO:GO:0030121 GO:GO:0030276
GO:GO:0006896 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 OMA:MMQFMLL OrthoDB:EOG45MRFT
EMBL:X70279 EMBL:Z30314 EMBL:U17246 EMBL:AY692851 PIR:S37757
RefSeq:NP_013271.1 ProteinModelPortal:P35181 DIP:DIP-4806N
IntAct:P35181 MINT:MINT-475400 STRING:P35181 PaxDb:P35181
EnsemblFungi:YLR170C GeneID:850868 KEGG:sce:YLR170C CYGD:YLR170c
NextBio:967197 Genevestigator:P35181 GermOnline:YLR170C
Uniprot:P35181
Length = 156
Score = 225 (84.3 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 45/94 (47%), Positives = 65/94 (69%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICV--DVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVF 143
N ++ + K+VY+RYA LYF + + DV DN L LE IH FVE ++ YF NVCELD++F
Sbjct: 50 NIIEYNDHKVVYKRYASLYFIVGMTPDV-DNELLTLEIIHRFVETMDTYFGNVCELDIIF 108
Query: 144 NFYKVYTVVDEMFLA-GEIRETSQTKVLKELRVL 176
NF KVY +++EM + G I E+S+ +VL + V+
Sbjct: 109 NFSKVYDILNEMIMCDGSIAESSRKEVLHHVTVM 142
Score = 209 (78.6 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICV--DVNDNNLCYLEAI 64
EK K+++++ + R K N +E+ + K+VY+RYA LYF + + DV DN L LE I
Sbjct: 29 EKAKIVKDLTPTILARKPKMCNIIEYNDHKVVYKRYASLYFIVGMTPDV-DNELLTLEII 87
Query: 65 HNFVEVLNEYFHNVCELDLVFNFYK 89
H FVE ++ YF NVCELD++FNF K
Sbjct: 88 HRFVETMDTYFGNVCELDIIFNFSK 112
>CGD|CAL0001042 [details] [associations]
symbol:orf19.1012 species:5476 "Candida albicans" [GO:0005768
"endosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030121 "AP-1 adaptor
complex" evidence=IEA] [GO:0006896 "Golgi to vacuole transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IEA] InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 CGD:CAL0001042 GO:GO:0008565
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
PANTHER:PTHR11753 EMBL:AACQ01000293 EMBL:AACQ01000292
RefSeq:XP_710269.1 RefSeq:XP_710277.1 ProteinModelPortal:Q59KJ6
STRING:Q59KJ6 GeneID:3648125 GeneID:3648132 KEGG:cal:CaO19.1012
KEGG:cal:CaO19.8626 Uniprot:Q59KJ6
Length = 153
Score = 224 (83.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 40/88 (45%), Positives = 64/88 (72%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
N ++++ KI+YRRYA L+F I V+ +DN L LE IH FVE +++ + NVCELD++F F
Sbjct: 49 NVLEYKDLKIIYRRYASLFFVIGVNSDDNELIGLEIIHRFVEQMDKIYGNVCELDIIFGF 108
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
K Y ++DE+ + G ++E+S+ +VLK +
Sbjct: 109 DKAYHILDELLIDGYLQESSKREVLKRV 136
Score = 214 (80.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/83 (48%), Positives = 58/83 (69%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
EK K+I E+ ++ R AK N +E+++ KI+YRRYA L+F I V+ +DN L LE IH
Sbjct: 28 EKSKIIRELSTIILSRRAKMCNVLEYKDLKIIYRRYASLFFVIGVNSDDNELIGLEIIHR 87
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
FVE +++ + NVCELD++F F K
Sbjct: 88 FVEQMDKIYGNVCELDIIFGFDK 110
>GENEDB_PFALCIPARUM|PFD1090c [details] [associations]
symbol:PFD1090c "clathrin assembly protein,
putative" species:5833 "Plasmodium falciparum" [GO:0030133
"transport vesicle" evidence=ISS] [GO:0030141 "secretory granule"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 GO:GO:0016192 GO:GO:0008565 GO:GO:0030141
GO:GO:0030133 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
HOGENOM:HOG000185227 PANTHER:PTHR11753 EMBL:AL844503 KO:K12403
OMA:KLVYRQY RefSeq:XP_001351534.1 ProteinModelPortal:Q8IFN5
PRIDE:Q8IFN5 EnsemblProtists:PFD1090c:mRNA GeneID:812595
KEGG:pfa:PFD1090c EuPathDB:PlasmoDB:PF3D7_0423100
ProtClustDB:CLSZ2733704 Uniprot:Q8IFN5
Length = 146
Score = 224 (83.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 40/97 (41%), Positives = 65/97 (67%)
Query: 81 LDLVFNFYKFRNFKIVYRRYAGLYFCICVDVND-NNLCYLEAIHNFVEVLNEYFHNVCEL 139
+D +F ++R +KI+YRRYA LY + V D N LE IHN +E+L++Y+ NVCEL
Sbjct: 43 VDYQCSFLQYREYKIIYRRYASLYLIVGVSDQDVNEFAILEMIHNIIEILDKYYENVCEL 102
Query: 140 DLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
D++FN K + ++DE+ GEI + ++T VL+ + ++
Sbjct: 103 DIMFNIDKTHFIIDEIICNGEICDMNKTNVLRPILLM 139
Score = 178 (67.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 28 NFVEFRNFKIVYRRYAGLYFCICVDVND-NNLCYLEAIHNFVEVLNEYFHNVCELDLVFN 86
+F+++R +KI+YRRYA LY + V D N LE IHN +E+L++Y+ NVCELD++FN
Sbjct: 48 SFLQYREYKIIYRRYASLYLIVGVSDQDVNEFAILEMIHNIIEILDKYYENVCELDIMFN 107
Query: 87 FYK 89
K
Sbjct: 108 IDK 110
>UNIPROTKB|Q8IFN5 [details] [associations]
symbol:PFD1090c "Clathrin assembly protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030133 "transport
vesicle" evidence=ISS] [GO:0030141 "secretory granule"
evidence=ISS] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 GO:GO:0016192 GO:GO:0008565 GO:GO:0030141
GO:GO:0030133 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
HOGENOM:HOG000185227 PANTHER:PTHR11753 EMBL:AL844503 KO:K12403
OMA:KLVYRQY RefSeq:XP_001351534.1 ProteinModelPortal:Q8IFN5
PRIDE:Q8IFN5 EnsemblProtists:PFD1090c:mRNA GeneID:812595
KEGG:pfa:PFD1090c EuPathDB:PlasmoDB:PF3D7_0423100
ProtClustDB:CLSZ2733704 Uniprot:Q8IFN5
Length = 146
Score = 224 (83.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 40/97 (41%), Positives = 65/97 (67%)
Query: 81 LDLVFNFYKFRNFKIVYRRYAGLYFCICVDVND-NNLCYLEAIHNFVEVLNEYFHNVCEL 139
+D +F ++R +KI+YRRYA LY + V D N LE IHN +E+L++Y+ NVCEL
Sbjct: 43 VDYQCSFLQYREYKIIYRRYASLYLIVGVSDQDVNEFAILEMIHNIIEILDKYYENVCEL 102
Query: 140 DLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
D++FN K + ++DE+ GEI + ++T VL+ + ++
Sbjct: 103 DIMFNIDKTHFIIDEIICNGEICDMNKTNVLRPILLM 139
Score = 178 (67.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 28 NFVEFRNFKIVYRRYAGLYFCICVDVND-NNLCYLEAIHNFVEVLNEYFHNVCELDLVFN 86
+F+++R +KI+YRRYA LY + V D N LE IHN +E+L++Y+ NVCELD++FN
Sbjct: 48 SFLQYREYKIIYRRYASLYLIVGVSDQDVNEFAILEMIHNIIEILDKYYENVCELDIMFN 107
Query: 87 FYK 89
K
Sbjct: 108 IDK 110
>UNIPROTKB|F1SHF5 [details] [associations]
symbol:AP4S1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008565 "protein transporter activity" evidence=IEA]
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GeneTree:ENSGT00530000062839 CTD:11154 KO:K12403
OMA:KLVYRQY EMBL:CT967321 RefSeq:NP_001230426.1 UniGene:Ssc.85301
Ensembl:ENSSSCT00000002205 GeneID:100154615 KEGG:ssc:100154615
Uniprot:F1SHF5
Length = 144
Score = 223 (83.6 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 41/91 (45%), Positives = 65/91 (71%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++++FK++YR+YA L+ + V+ +N + E IHNFVEVL+EYF V ELD++FN
Sbjct: 48 SFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNL 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
KV+ ++DEM L G I ET++ ++L L +L
Sbjct: 108 DKVHIILDEMVLNGCIVETNRARILAPLLIL 138
Score = 186 (70.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 8 KQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
K+ L+E EV R ++ +F+E+++FK++YR+YA L+ + V+ +N + E IHN
Sbjct: 27 KRTLLETEVIKSCLSRSSEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHN 86
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
FVEVL+EYF V ELD++FN K
Sbjct: 87 FVEVLDEYFSRVSELDIMFNLDK 109
>GENEDB_PFALCIPARUM|PFB0805c [details] [associations]
symbol:PFB0805c "clathrin coat assembly protein,
putative" species:5833 "Plasmodium falciparum" [GO:0030131
"clathrin adaptor complex" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
HOGENOM:HOG000185227 PANTHER:PTHR11753 EMBL:AE001362 PIR:C71605
RefSeq:XP_001349677.1 ProteinModelPortal:O96254 PRIDE:O96254
EnsemblProtists:PFB0805c:mRNA GeneID:812759 KEGG:pfa:PFB0805c
EuPathDB:PlasmoDB:PF3D7_0217300 ProtClustDB:CLSZ2432659
Uniprot:O96254
Length = 141
Score = 222 (83.2 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 41/92 (44%), Positives = 62/92 (67%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
N + + NFKIVYR YAGLYF +C++ N+N L LE IH ++L+ +F NVCELDL+FNF
Sbjct: 48 NIFVYENFKIVYRLYAGLYFVVCIE-NENELYILEFIHFMAQLLDTFFTNVCELDLLFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLR 177
+ +Y D + L G I E ++ +L ++ ++
Sbjct: 107 HFLYYFFDNIILGGYIYEINRNIILDKINKIK 138
Score = 214 (80.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/85 (47%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
+++KQK IE +++ ++ R + N + NFKIVYR YAGLYF +C++ N+N L LE
Sbjct: 24 NEKKQKKIERDINKILINRSRSYANIFVYENFKIVYRLYAGLYFVVCIE-NENELYILEF 82
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFY 88
IH ++L+ +F NVCELDL+FNF+
Sbjct: 83 IHFMAQLLDTFFTNVCELDLLFNFH 107
>UNIPROTKB|O96254 [details] [associations]
symbol:PFB0805c "Clathrin coat assembly protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0030131 "clathrin adaptor
complex" evidence=ISS] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 HOGENOM:HOG000185227 PANTHER:PTHR11753
EMBL:AE001362 PIR:C71605 RefSeq:XP_001349677.1
ProteinModelPortal:O96254 PRIDE:O96254
EnsemblProtists:PFB0805c:mRNA GeneID:812759 KEGG:pfa:PFB0805c
EuPathDB:PlasmoDB:PF3D7_0217300 ProtClustDB:CLSZ2432659
Uniprot:O96254
Length = 141
Score = 222 (83.2 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 41/92 (44%), Positives = 62/92 (67%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
N + + NFKIVYR YAGLYF +C++ N+N L LE IH ++L+ +F NVCELDL+FNF
Sbjct: 48 NIFVYENFKIVYRLYAGLYFVVCIE-NENELYILEFIHFMAQLLDTFFTNVCELDLLFNF 106
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVLR 177
+ +Y D + L G I E ++ +L ++ ++
Sbjct: 107 HFLYYFFDNIILGGYIYEINRNIILDKINKIK 138
Score = 214 (80.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/85 (47%), Positives = 60/85 (70%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
+++KQK IE +++ ++ R + N + NFKIVYR YAGLYF +C++ N+N L LE
Sbjct: 24 NEKKQKKIERDINKILINRSRSYANIFVYENFKIVYRLYAGLYFVVCIE-NENELYILEF 82
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFY 88
IH ++L+ +F NVCELDL+FNF+
Sbjct: 83 IHFMAQLLDTFFTNVCELDLLFNFH 107
>RGD|1311990 [details] [associations]
symbol:Ap4s1 "adaptor-related protein complex 4, sigma 1
subunit" species:10116 "Rattus norvegicus" [GO:0008565 "protein
transporter activity" evidence=IEA] InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 RGD:1311990 GO:GO:0008565
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 CTD:11154 KO:K12403 IPI:IPI00188078
RefSeq:NP_001124471.1 UniGene:Rn.6307 Ensembl:ENSRNOT00000007887
GeneID:366618 KEGG:rno:366618 UCSC:RGD:1311990 NextBio:689741
ArrayExpress:F1M5X2 Uniprot:F1M5X2
Length = 144
Score = 222 (83.2 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 41/91 (45%), Positives = 65/91 (71%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++++FK++YR+YA L+ + V+ +N + E IHNFVEVL+EYF V ELD++FN
Sbjct: 48 SFIEYKDFKLIYRQYAALFVVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNL 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
KV+ ++DEM L G I ET++ ++L L +L
Sbjct: 108 DKVHIILDEMVLNGCIVETNRARILAPLLIL 138
Score = 190 (71.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 37/86 (43%), Positives = 57/86 (66%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
D K+ L+E EV R ++ +F+E+++FK++YR+YA L+ + V+ +N + E
Sbjct: 24 DINKRALLETEVSKSCLSRSSEQCSFIEYKDFKLIYRQYAALFVVVGVNDTENEMAIYEF 83
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFYK 89
IHNFVEVL+EYF V ELD++FN K
Sbjct: 84 IHNFVEVLDEYFSRVSELDIMFNLDK 109
>UNIPROTKB|G3V3X7 [details] [associations]
symbol:AP4S1 "AP-4 complex subunit sigma-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 HGNC:HGNC:575 ChiTaRS:AP4S1
EMBL:AL121808 EMBL:AL049830 ProteinModelPortal:G3V3X7 SMR:G3V3X7
PRIDE:G3V3X7 Ensembl:ENST00000557346 ArrayExpress:G3V3X7
Bgee:G3V3X7 Uniprot:G3V3X7
Length = 133
Score = 222 (83.2 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 48/120 (40%), Positives = 74/120 (61%)
Query: 51 VDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVD 110
VD+N L E I + + NE C +F ++++FK++YR+YA L+ + V+
Sbjct: 23 VDINKRTLLETEVIKSCLSRSNEQ----C------SFIEYKDFKLIYRQYAALFIVVGVN 72
Query: 111 VNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVL 170
+N + E IHNFVEVL+EYF V ELD++FN KV+ ++DEM L G I ET++ ++L
Sbjct: 73 DTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARIL 132
Score = 186 (70.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 37/86 (43%), Positives = 56/86 (65%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
D K+ L+E EV R + +F+E+++FK++YR+YA L+ + V+ +N + E
Sbjct: 24 DINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEF 83
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFYK 89
IHNFVEVL+EYF V ELD++FN K
Sbjct: 84 IHNFVEVLDEYFSRVSELDIMFNLDK 109
>UNIPROTKB|Q3ZBB6 [details] [associations]
symbol:AP4S1 "AP-4 complex subunit sigma-1" species:9913
"Bos taurus" [GO:0005905 "coated pit" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794 GO:GO:0008565
GO:GO:0005905 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 HOVERGEN:HBG050517 HSSP:P62743
EMBL:BC103455 IPI:IPI00698561 RefSeq:NP_001035693.1
UniGene:Bt.49383 ProteinModelPortal:Q3ZBB6
Ensembl:ENSBTAT00000046059 GeneID:618267 KEGG:bta:618267 CTD:11154
InParanoid:Q3ZBB6 KO:K12403 OMA:KLVYRQY OrthoDB:EOG4NVZMN
BindingDB:Q3ZBB6 NextBio:20901094 Uniprot:Q3ZBB6
Length = 144
Score = 222 (83.2 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 48/126 (38%), Positives = 77/126 (61%)
Query: 51 VDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVD 110
V++N L E I + + NE C +F ++++FK++YR+YA L+ + V+
Sbjct: 23 VEINKRTLLETEVIKSCLSRSNEQ----C------SFIEYKDFKLIYRQYAALFIVVGVN 72
Query: 111 VNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVL 170
+N + E IHNFVEVL++YF V ELD++FN KV+ ++DEM L G I ET++ ++L
Sbjct: 73 DTENEMAIYEFIHNFVEVLDDYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARIL 132
Query: 171 KELRVL 176
L +L
Sbjct: 133 APLLIL 138
Score = 180 (68.4 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 35/83 (42%), Positives = 55/83 (66%)
Query: 8 KQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
K+ L+E EV R + +F+E+++FK++YR+YA L+ + V+ +N + E IHN
Sbjct: 27 KRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHN 86
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
FVEVL++YF V ELD++FN K
Sbjct: 87 FVEVLDDYFSRVSELDIMFNLDK 109
>TAIR|locus:2051905 [details] [associations]
symbol:AT2G19790 species:3702 "Arabidopsis thaliana"
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0030125 "clathrin vesicle coat" evidence=ISS] [GO:0006301
"postreplication repair" evidence=RCA] InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008565 GO:GO:0005905
EMBL:AC005169 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753 KO:K12403
OMA:KLVYRQY EMBL:AF370185 EMBL:AY059143 EMBL:AY088273
IPI:IPI00539602 PIR:B84581 RefSeq:NP_179569.1 UniGene:At.24011
UniGene:At.63553 ProteinModelPortal:O82201 SMR:O82201 STRING:O82201
PaxDb:O82201 PRIDE:O82201 EnsemblPlants:AT2G19790.1 GeneID:816498
KEGG:ath:AT2G19790 TAIR:At2g19790 InParanoid:O82201
PhylomeDB:O82201 ProtClustDB:CLSN2683196 Genevestigator:O82201
Uniprot:O82201
Length = 143
Score = 217 (81.4 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 40/91 (43%), Positives = 65/91 (71%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F + RN+KIVYRRYA L+F + VD ++N L LE IH VE ++++F NVCELD++F+
Sbjct: 49 SFVEHRNYKIVYRRYASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHL 108
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
K + +++EM + G I ETS+ +L ++++
Sbjct: 109 EKAHFMLEEMVMNGCIVETSKANILSPIQLM 139
Score = 195 (73.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 6 DEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIH 65
+E++ L E+ R+ + +FVE RN+KIVYRRYA L+F + VD ++N L LE IH
Sbjct: 27 EERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRRYASLFFMVGVDDDENELAILEFIH 86
Query: 66 NFVEVLNEYFHNVCELDLVFNFYK 89
VE ++++F NVCELD++F+ K
Sbjct: 87 LLVETMDKHFGNVCELDIMFHLEK 110
>DICTYBASE|DDB_G0279359 [details] [associations]
symbol:ap1s1 "sigma adaptin" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0030665 "clathrin-coated
vesicle membrane" evidence=IEA] InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 dictyBase:DDB_G0279359
GO:GO:0005794 GenomeReviews:CM000152_GR GO:GO:0008565 GO:GO:0006897
GO:GO:0030665 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 PANTHER:PTHR11753 EMBL:AAFI02000030
RefSeq:XP_641814.1 HSSP:P62743 ProteinModelPortal:Q54WW3
EnsemblProtists:DDB0232337 GeneID:8622010 KEGG:ddi:DDB_G0279359
OMA:ICELDLI Uniprot:Q54WW3
Length = 156
Score = 216 (81.1 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 39/88 (44%), Positives = 59/88 (67%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
NF ++R F IVY+R+A L+F + D DN L LE+I FV VL+ F N+CELDL++ F
Sbjct: 48 NFVQWREFTIVYQRFASLFFVMVTDSTDNELVTLESIQRFVVVLDIVFGNICELDLIYEF 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKEL 173
+ Y V+DE L G ++E+S ++L+ +
Sbjct: 108 QRAYQVLDEFLLTGHLQESSSKEILRAI 135
Score = 188 (71.2 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 7 EKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
EK + EV V R K NFV++R F IVY+R+A L+F + D DN L LE+I
Sbjct: 27 EKNRATREVMNQVLSRSPKFCNFVQWREFTIVYQRFASLFFVMVTDSTDNELVTLESIQR 86
Query: 67 FVEVLNEYFHNVCELDLVFNFYK 89
FV VL+ F N+CELDL++ F +
Sbjct: 87 FVVVLDIVFGNICELDLIYEFQR 109
>MGI|MGI:1337065 [details] [associations]
symbol:Ap4s1 "adaptor-related protein complex AP-4, sigma 1"
species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=TAS] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 MGI:MGI:1337065 GO:GO:0005794
GO:GO:0006886 GO:GO:0016192 GO:GO:0008565 GO:GO:0005905
GO:GO:0005802 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753
GeneTree:ENSGT00530000062839 HOVERGEN:HBG050517 CTD:11154 KO:K12403
OMA:KLVYRQY OrthoDB:EOG4NVZMN EMBL:AF092093 EMBL:AK005283
EMBL:BC053339 IPI:IPI00323059 RefSeq:NP_068356.1 UniGene:Mm.386749
ProteinModelPortal:Q9WVL1 SMR:Q9WVL1 STRING:Q9WVL1
PhosphoSite:Q9WVL1 PRIDE:Q9WVL1 Ensembl:ENSMUST00000021338
GeneID:11782 KEGG:mmu:11782 UCSC:uc007nmv.2 InParanoid:Q9WVL1
NextBio:279587 Bgee:Q9WVL1 CleanEx:MM_AP4S1 Genevestigator:Q9WVL1
GermOnline:ENSMUSG00000020955 Uniprot:Q9WVL1
Length = 144
Score = 215 (80.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++++FK++YR+YA L+ + V+ +N + E IHNFVEVL+ YF V ELD++FN
Sbjct: 48 SFIEYKDFKLIYRQYAALFVVVGVNDTENEMAIYEFIHNFVEVLDGYFSRVSELDIMFNL 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
KV+ ++DEM L G I ET++ ++L L +L
Sbjct: 108 DKVHIILDEMVLNGCIVETNRARILAPLLIL 138
Score = 183 (69.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 36/86 (41%), Positives = 56/86 (65%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
D K+ L+E EV R ++ +F+E+++FK++YR+YA L+ + V+ +N + E
Sbjct: 24 DINKRALLETEVSKSCLSRSSEQCSFIEYKDFKLIYRQYAALFVVVGVNDTENEMAIYEF 83
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFYK 89
IHNFVEVL+ YF V ELD++FN K
Sbjct: 84 IHNFVEVLDGYFSRVSELDIMFNLDK 109
>UNIPROTKB|E1C054 [details] [associations]
symbol:AP4S1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008565 "protein transporter activity" evidence=IEA]
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GeneTree:ENSGT00530000062839 CTD:11154 KO:K12403
OMA:KLVYRQY EMBL:AADN02003354 IPI:IPI00680060 RefSeq:XP_421226.2
Ensembl:ENSGALT00000016156 GeneID:423309 KEGG:gga:423309
NextBio:20825798 Uniprot:E1C054
Length = 144
Score = 214 (80.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 39/91 (42%), Positives = 64/91 (70%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++++FK++YR+YA L+ + ++ +N + E IHNFVEVL++YF V ELD++FN
Sbjct: 48 SFIEYKDFKLIYRQYAALFVVVGINETENEMAVYELIHNFVEVLDKYFSRVSELDIMFNL 107
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
+V+ ++DEM L G I ET+ ++L L VL
Sbjct: 108 DRVHIILDEMVLNGCIVETNPNRILAPLFVL 138
Score = 174 (66.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 39/110 (35%), Positives = 64/110 (58%)
Query: 8 KQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHN 66
K+ ++E EV R +F+E+++FK++YR+YA L+ + ++ +N + E IHN
Sbjct: 27 KRTMLEAEVIKHCLSRSKDQCSFIEYKDFKLIYRQYAALFVVVGINETENEMAVYELIHN 86
Query: 67 FVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVDVNDNNL 116
FVEVL++YF V ELD++FN + I+ L CI V+ N N +
Sbjct: 87 FVEVLDKYFSRVSELDIMFNLDRVH---IILDEMV-LNGCI-VETNPNRI 131
>ZFIN|ZDB-GENE-030616-404 [details] [associations]
symbol:ap4s1 "adaptor-related protein complex 4,
sigma 1 subunit" species:7955 "Danio rerio" [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
ZFIN:ZDB-GENE-030616-404 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 GeneTree:ENSGT00530000062839
EMBL:BX324186 Ensembl:ENSDART00000061853 Uniprot:K9J6Q2
Length = 146
Score = 214 (80.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 41/93 (44%), Positives = 64/93 (68%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVC--ELDLVF 143
+F +++++K+VYR+YA L+ + V N+N L E +HNFVEVL++YF V ELD++F
Sbjct: 48 SFVEYKDYKLVYRQYAALFIVVGVTENENELSIYELVHNFVEVLDKYFSRVVSSELDIMF 107
Query: 144 NFYKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
N KV+ ++DEM L G I ET++ ++L L L
Sbjct: 108 NLDKVHIILDEMILNGHIVETNKNRILAPLLAL 140
Score = 166 (63.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 22 RDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVC-- 79
R + +FVE++++K+VYR+YA L+ + V N+N L E +HNFVEVL++YF V
Sbjct: 42 RRKEECSFVEYKDYKLVYRQYAALFIVVGVTENENELSIYELVHNFVEVLDKYFSRVVSS 101
Query: 80 ELDLVFNFYK 89
ELD++FN K
Sbjct: 102 ELDIMFNLDK 111
>UNIPROTKB|J3KNK4 [details] [associations]
symbol:AP4S1 "AP-4 complex subunit sigma-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 HGNC:HGNC:575 ChiTaRS:AP4S1
EMBL:AL121808 EMBL:AL049830 ProteinModelPortal:J3KNK4
Ensembl:ENST00000313566 Uniprot:J3KNK4
Length = 144
Score = 210 (79.0 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 47/126 (37%), Positives = 75/126 (59%)
Query: 51 VDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVD 110
VD+N L E I + + NE C +F ++++FK++YR+YA L+ + V+
Sbjct: 23 VDINKRTLLETEVIKSCLSRSNEQ----C------SFIEYKDFKLIYRQYAALFIVVGVN 72
Query: 111 VNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVL 170
+N + E IHNFVEVL+EYF V + ++FN KV+ ++DEM L G I ET++ ++L
Sbjct: 73 DTENEMAIYEFIHNFVEVLDEYFSRVVKGHIMFNLDKVHIILDEMVLNGCIVETNRARIL 132
Query: 171 KELRVL 176
L +L
Sbjct: 133 APLLIL 138
Score = 167 (63.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
D K+ L+E EV R + +F+E+++FK++YR+YA L+ + V+ +N + E
Sbjct: 24 DINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEF 83
Query: 64 IHNFVEVLNEYFHNVCELDLVFNFYK 89
IHNFVEVL+EYF V + ++FN K
Sbjct: 84 IHNFVEVLDEYFSRVVKGHIMFNLDK 109
>ZFIN|ZDB-GENE-040718-274 [details] [associations]
symbol:ap3s2 "adaptor-related protein complex 3,
sigma 2 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027155 PIRSF:PIRSF015588
PROSITE:PS00989 ZFIN:ZDB-GENE-040718-274 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753
HOVERGEN:HBG050517 HOGENOM:HOG000185228 KO:K12399
GeneTree:ENSGT00550000074761 CTD:10239 PANTHER:PTHR11753:SF2
EMBL:BX572619 EMBL:BC076269 IPI:IPI00635990 RefSeq:NP_001002539.1
UniGene:Dr.75915 Ensembl:ENSDART00000058339 GeneID:436812
KEGG:dre:436812 InParanoid:Q6DGS0 NextBio:20831244 Uniprot:Q6DGS0
Length = 192
Score = 201 (75.8 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 43/118 (36%), Positives = 74/118 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIIRETFHLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRVLRSR 179
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++ L++R
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQVE-LQNR 146
Score = 182 (69.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 39/93 (41%), Positives = 58/93 (62%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F +D +Q++I E +V+ RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FAEDMQQQIIRETFHLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHMDK 115
>ZFIN|ZDB-GENE-041010-38 [details] [associations]
symbol:ap3s1 "adaptor-related protein complex 3,
sigma 1 subunit" species:7955 "Danio rerio" [GO:0030123 "AP-3
adaptor complex" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027155 PIRSF:PIRSF015588
PROSITE:PS00989 ZFIN:ZDB-GENE-041010-38 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 HOVERGEN:HBG050517 CTD:1176
KO:K12399 PANTHER:PTHR11753:SF2 EMBL:BC083303 IPI:IPI00492904
RefSeq:NP_001005964.1 UniGene:Dr.150249 ProteinModelPortal:Q5XJJ8
GeneID:449791 KEGG:dre:449791 NextBio:20832863 Uniprot:Q5XJJ8
Length = 193
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 42/111 (37%), Positives = 69/111 (62%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKE 172
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ ++++ +
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHMDKVHNILAEMVMGGMVLETNMSEIITQ 140
Score = 182 (69.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 39/97 (40%), Positives = 59/97 (60%)
Query: 2 NFDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVND 55
++ +D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD ++
Sbjct: 22 HYTEDTEQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSE 81
Query: 56 NNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
+ L L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 82 SELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHN 118
>UNIPROTKB|Q1JQA3 [details] [associations]
symbol:AP3S2 "AP-3 complex subunit sigma-2" species:9913
"Bos taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794 GO:GO:0006886
GO:GO:0030117 GO:GO:0008565 GO:GO:0030659 GO:GO:0008089
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
PANTHER:PTHR11753 HOVERGEN:HBG050517 GO:GO:0048490 KO:K12399
OrthoDB:EOG4GF3G5 GeneTree:ENSGT00550000074761 EMBL:BC116115
IPI:IPI00702122 RefSeq:NP_001068844.1 UniGene:Bt.14403
ProteinModelPortal:Q1JQA3 Ensembl:ENSBTAT00000001846 GeneID:508867
KEGG:bta:508867 CTD:10239 InParanoid:Q1JQA3 OMA:IFHADAV
BindingDB:Q1JQA3 NextBio:20868708 PANTHER:PTHR11753:SF2
Uniprot:Q1JQA3
Length = 193
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 40/112 (35%), Positives = 70/112 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 141
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHMDK 115
>UNIPROTKB|J9NVB9 [details] [associations]
symbol:AP3S2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 KO:K12399
GeneTree:ENSGT00550000074761 CTD:10239 OMA:IFHADAV
PANTHER:PTHR11753:SF2 EMBL:AAEX03002325 EMBL:AAEX03002326
RefSeq:NP_001239308.1 ProteinModelPortal:J9NVB9
Ensembl:ENSCAFT00000049227 GeneID:479042 KEGG:cfa:479042
Uniprot:J9NVB9
Length = 193
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 40/112 (35%), Positives = 70/112 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 141
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHMDK 115
>UNIPROTKB|H0YN38 [details] [associations]
symbol:C15orf38-AP3S2 "Protein C15orf38-AP3S2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 EMBL:AC018988
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
PANTHER:PTHR11753:SF2 EMBL:AC027176 HGNC:HGNC:38824
ChiTaRS:C15orf38-AP3S2 ProteinModelPortal:H0YN38 SMR:H0YN38
Ensembl:ENST00000560940 Bgee:H0YN38 Uniprot:H0YN38
Length = 156
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 40/112 (35%), Positives = 70/112 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 141
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHMDK 115
>UNIPROTKB|P59780 [details] [associations]
symbol:AP3S2 "AP-3 complex subunit sigma-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IDA] [GO:0008089
"anterograde axon cargo transport" evidence=ISS] [GO:0048490
"anterograde synaptic vesicle transport" evidence=ISS]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794
GO:GO:0006886 GO:GO:0008565 GO:GO:0030659 GO:GO:0008089
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
PANTHER:PTHR11753 HOVERGEN:HBG050517 HOGENOM:HOG000185228
GO:GO:0030123 GO:GO:0048490 KO:K12399 OrthoDB:EOG4GF3G5 CTD:10239
OMA:IFHADAV PANTHER:PTHR11753:SF2 EMBL:X99459 EMBL:BC002785
EMBL:BC010020 IPI:IPI00025115 RefSeq:NP_005820.1 UniGene:Hs.632161
ProteinModelPortal:P59780 SMR:P59780 IntAct:P59780 STRING:P59780
PhosphoSite:P59780 DMDM:33112220 PaxDb:P59780 PRIDE:P59780
DNASU:10239 Ensembl:ENST00000336418 GeneID:10239 KEGG:hsa:10239
UCSC:uc002boq.4 GeneCards:GC15M090373 HGNC:HGNC:571 MIM:602416
neXtProt:NX_P59780 PharmGKB:PA24863 InParanoid:P59780
PhylomeDB:P59780 ChiTaRS:AP3S2 GenomeRNAi:10239 NextBio:38788
ArrayExpress:P59780 Bgee:P59780 CleanEx:HS_AP3S2
Genevestigator:P59780 GermOnline:ENSG00000157823 Uniprot:P59780
Length = 193
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 40/112 (35%), Positives = 70/112 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 141
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHMDK 115
>UNIPROTKB|I3LLA5 [details] [associations]
symbol:AP3S2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753 KO:K12399
GeneTree:ENSGT00550000074761 CTD:10239 OMA:IFHADAV
PANTHER:PTHR11753:SF2 EMBL:CT737411 EMBL:CU424433
RefSeq:NP_001231477.1 UniGene:Ssc.54742 Ensembl:ENSSSCT00000025884
GeneID:100153862 KEGG:ssc:100153862 Uniprot:I3LLA5
Length = 193
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 40/112 (35%), Positives = 70/112 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 141
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHMDK 115
>UNIPROTKB|Q5RDP9 [details] [associations]
symbol:AP3S2 "AP-3 complex subunit sigma-2" species:9601
"Pongo abelii" [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027155 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0005794 GO:GO:0006886 GO:GO:0030117
GO:GO:0008565 GO:GO:0030659 GO:GO:0008089 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753 HOVERGEN:HBG050517
GO:GO:0048490 KO:K12399 GeneTree:ENSGT00550000074761 CTD:10239
OMA:IFHADAV PANTHER:PTHR11753:SF2 EMBL:CR857854
RefSeq:NP_001125012.1 UniGene:Pab.13806 ProteinModelPortal:Q5RDP9
SMR:Q5RDP9 Ensembl:ENSPPYT00000007996 GeneID:100171891
KEGG:pon:100171891 InParanoid:Q5RDP9 Uniprot:Q5RDP9
Length = 193
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 40/112 (35%), Positives = 70/112 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 141
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHMDK 115
>MGI|MGI:1337060 [details] [associations]
symbol:Ap3s2 "adaptor-related protein complex 3, sigma 2
subunit" species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0008089 "anterograde axon
cargo transport" evidence=IMP] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=TAS] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030123 "AP-3 adaptor complex"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IMP]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989
MGI:MGI:1337060 GO:GO:0005794 GO:GO:0006886 GO:GO:0030117
GO:GO:0008565 GO:GO:0030659 GO:GO:0008089 GO:GO:0005802
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
PANTHER:PTHR11753 HOVERGEN:HBG050517 GO:GO:0048490 KO:K12399
OrthoDB:EOG4GF3G5 GeneTree:ENSGT00550000074761 CTD:10239
OMA:IFHADAV PANTHER:PTHR11753:SF2 ChiTaRS:AP3S2 EMBL:U91933
EMBL:AK028372 EMBL:AK037336 EMBL:AK150085 IPI:IPI00123099
RefSeq:NP_033812.3 UniGene:Mm.220173 ProteinModelPortal:Q8BSZ2
SMR:Q8BSZ2 STRING:Q8BSZ2 PhosphoSite:Q8BSZ2 PaxDb:Q8BSZ2
PRIDE:Q8BSZ2 Ensembl:ENSMUST00000075657 GeneID:11778 KEGG:mmu:11778
InParanoid:Q8BSZ2 NextBio:279579 Bgee:Q8BSZ2 Genevestigator:Q8BSZ2
GermOnline:ENSMUSG00000063801 Uniprot:Q8BSZ2
Length = 193
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 40/112 (35%), Positives = 70/112 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 141
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHMDK 115
>UNIPROTKB|H0YMK0 [details] [associations]
symbol:C15orf38-AP3S2 "Protein C15orf38-AP3S2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 EMBL:AC018988 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
PANTHER:PTHR11753:SF2 InterPro:IPR018889 Pfam:PF10574 EMBL:AC027176
HGNC:HGNC:38824 ChiTaRS:C15orf38-AP3S2 Ensembl:ENST00000559629
Bgee:H0YMK0 Uniprot:H0YMK0
Length = 184
Score = 198 (74.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 40/112 (35%), Positives = 70/112 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 66 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 125
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 126 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 177
Score = 170 (64.9 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 36/91 (39%), Positives = 56/91 (61%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDNNL 58
++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++ L
Sbjct: 61 EEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESEL 120
Query: 59 CYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 121 GILDLIQVFVETLDKCFENVCELDLIFHMDK 151
>UNIPROTKB|E2R3U4 [details] [associations]
symbol:AP3S1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GeneTree:ENSGT00550000074761 EMBL:AAEX03007713
Ensembl:ENSCAFT00000000324 Uniprot:E2R3U4
Length = 174
Score = 197 (74.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 42/112 (37%), Positives = 69/112 (61%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 11 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 70
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ +++ ++
Sbjct: 71 IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQI 122
Score = 192 (72.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 1 MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVN 54
MN+ +D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD +
Sbjct: 2 MNYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSS 61
Query: 55 DNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
++ L L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 62 ESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 99
>UNIPROTKB|Q2YDH6 [details] [associations]
symbol:AP3S1 "AP-3 complex subunit sigma-1" species:9913
"Bos taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0005794 GO:GO:0006886 GO:GO:0030117
GO:GO:0008565 GO:GO:0030659 GO:GO:0008089 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753
HOVERGEN:HBG050517 HOGENOM:HOG000185228 GO:GO:0048490 EMBL:BC110218
IPI:IPI00692920 RefSeq:NP_001039881.1 UniGene:Bt.2729
ProteinModelPortal:Q2YDH6 SMR:Q2YDH6 PRIDE:Q2YDH6 GeneID:536359
KEGG:bta:536359 CTD:1176 InParanoid:Q2YDH6 KO:K12399
OrthoDB:EOG4GF3G5 NextBio:20876937 Uniprot:Q2YDH6
Length = 193
Score = 197 (74.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 42/112 (37%), Positives = 69/112 (61%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQI 141
Score = 181 (68.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
+ +D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD +++
Sbjct: 23 YSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
L L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118
>UNIPROTKB|J9NVC8 [details] [associations]
symbol:AP3S1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 KO:K12399 OMA:HYNEDTE
GeneTree:ENSGT00550000074761 EMBL:AAEX03007713 RefSeq:XP_858735.2
ProteinModelPortal:J9NVC8 Ensembl:ENSCAFT00000044793 GeneID:607494
KEGG:cfa:607494 Uniprot:J9NVC8
Length = 193
Score = 197 (74.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 42/112 (37%), Positives = 69/112 (61%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQI 141
Score = 181 (68.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
+ +D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD +++
Sbjct: 23 YSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
L L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118
>UNIPROTKB|F5H459 [details] [associations]
symbol:AP3S1 "AP-3 complex subunit sigma-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 EMBL:AC010282
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
HGNC:HGNC:2013 ChiTaRS:AP3S1 PANTHER:PTHR11753:SF2 EMBL:AC026449
IPI:IPI01012817 ProteinModelPortal:F5H459 SMR:F5H459
Ensembl:ENST00000506430 ArrayExpress:F5H459 Bgee:F5H459
Uniprot:F5H459
Length = 162
Score = 197 (74.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 42/112 (37%), Positives = 69/112 (61%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQI 141
Score = 181 (68.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
+ +D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD +++
Sbjct: 23 YSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
L L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118
>UNIPROTKB|Q92572 [details] [associations]
symbol:AP3S1 "AP-3 complex subunit sigma-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008089 "anterograde axon cargo
transport" evidence=ISS] [GO:0048490 "anterograde synaptic vesicle
transport" evidence=ISS] [GO:0030133 "transport vesicle"
evidence=TAS] [GO:0005215 "transporter activity" evidence=NAS]
[GO:0030119 "AP-type membrane coat adaptor complex" evidence=TAS]
[GO:0008286 "insulin receptor signaling pathway" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794
GO:GO:0008286 GO:GO:0006886 GO:GO:0008565 GO:GO:0005215
GO:GO:0030659 GO:GO:0008089 GO:GO:0030133 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753
HOVERGEN:HBG050517 GO:GO:0030123 GO:GO:0048490 CTD:1176 KO:K12399
OrthoDB:EOG4GF3G5 EMBL:D63643 EMBL:U91932 EMBL:X99458 EMBL:BT009833
EMBL:CR450341 EMBL:BC000804 IPI:IPI00014624 RefSeq:NP_001275.1
UniGene:Hs.740519 ProteinModelPortal:Q92572 SMR:Q92572
STRING:Q92572 PhosphoSite:Q92572 DMDM:33112222 PaxDb:Q92572
PRIDE:Q92572 DNASU:1176 Ensembl:ENST00000316788 GeneID:1176
KEGG:hsa:1176 UCSC:uc003krk.3 GeneCards:GC05P115177 HGNC:HGNC:2013
MIM:601507 neXtProt:NX_Q92572 PharmGKB:PA24862 InParanoid:Q92572
OMA:HYNEDTE PhylomeDB:Q92572 ChiTaRS:AP3S1 GenomeRNAi:1176
NextBio:4862 ArrayExpress:Q92572 Bgee:Q92572 CleanEx:HS_AP3S1
Genevestigator:Q92572 GermOnline:ENSG00000177879 Uniprot:Q92572
Length = 193
Score = 197 (74.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 42/112 (37%), Positives = 69/112 (61%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQI 141
Score = 181 (68.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
+ +D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD +++
Sbjct: 23 YSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
L L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118
>MGI|MGI:1337062 [details] [associations]
symbol:Ap3s1 "adaptor-related protein complex 3, sigma 1
subunit" species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0008089 "anterograde axon
cargo transport" evidence=IMP] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=TAS] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030123 "AP-3 adaptor complex"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IMP]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 MGI:MGI:1337062 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0008565 GO:GO:0030659
GO:GO:0008089 GO:GO:0005802 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753 HOVERGEN:HBG050517
HOGENOM:HOG000185228 GO:GO:0048490 CTD:1176 KO:K12399
OrthoDB:EOG4GF3G5 OMA:HYNEDTE ChiTaRS:AP3S1 EMBL:AF084575
EMBL:AK002565 EMBL:BC012656 IPI:IPI00322193 RefSeq:NP_033811.1
UniGene:Mm.312536 ProteinModelPortal:Q9DCR2 SMR:Q9DCR2
STRING:Q9DCR2 PhosphoSite:Q9DCR2 PaxDb:Q9DCR2 PRIDE:Q9DCR2
Ensembl:ENSMUST00000025357 GeneID:11777 KEGG:mmu:11777
GeneTree:ENSGT00550000074761 InParanoid:Q9DCR2 NextBio:279575
Bgee:Q9DCR2 Genevestigator:Q9DCR2 GermOnline:ENSMUSG00000024480
Uniprot:Q9DCR2
Length = 193
Score = 197 (74.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 42/112 (37%), Positives = 69/112 (61%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQI 141
Score = 181 (68.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
+ +D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD +++
Sbjct: 23 YSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
L L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118
>RGD|1311115 [details] [associations]
symbol:Ap3s1 "adaptor-related protein complex 3, sigma 1
subunit" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030123 "AP-3
adaptor complex" evidence=IEA] [GO:0048490 "anterograde synaptic
vesicle transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 PROSITE:PS00989 RGD:1311115 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 EMBL:CH473971
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
CTD:1176 KO:K12399 GeneTree:ENSGT00550000074761
PANTHER:PTHR11753:SF2 RefSeq:NP_001100403.1 UniGene:Rn.3070
Ensembl:ENSRNOT00000064116 GeneID:302290 KEGG:rno:302290
NextBio:649404 Uniprot:G3V9Y9
Length = 157
Score = 197 (74.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 42/112 (37%), Positives = 69/112 (61%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ +++ ++
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQI 141
Score = 181 (68.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
+ +D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD +++
Sbjct: 23 YSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
L L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118
>UNIPROTKB|F1NKK0 [details] [associations]
symbol:AP3S1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 GeneTree:ENSGT00550000074761
PANTHER:PTHR11753:SF2 EMBL:AADN02070636 EMBL:AADN02070637
IPI:IPI00818504 Ensembl:ENSGALT00000037529 ArrayExpress:F1NKK0
Uniprot:F1NKK0
Length = 169
Score = 197 (74.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 42/112 (37%), Positives = 69/112 (61%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 7 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 66
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ +++ ++
Sbjct: 67 IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQI 118
Score = 178 (67.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 39/94 (41%), Positives = 57/94 (60%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDNNL 58
+D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD +++ L
Sbjct: 2 EDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESEL 61
Query: 59 CYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 62 GILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 95
>UNIPROTKB|F1P151 [details] [associations]
symbol:AP3S1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753 OMA:HYNEDTE
GeneTree:ENSGT00550000074761 EMBL:AADN02070636 EMBL:AADN02070637
IPI:IPI00588856 Ensembl:ENSGALT00000003691 ArrayExpress:F1P151
Uniprot:F1P151
Length = 170
Score = 197 (74.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 42/112 (37%), Positives = 69/112 (61%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D V NF + + K++YR YA LYF CVD +++ L L+
Sbjct: 7 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 66
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ EM + G + ET+ +++ ++
Sbjct: 67 IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQI 118
Score = 178 (67.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 39/94 (41%), Positives = 57/94 (60%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDNNL 58
+D +Q++I E +V+ RD NF+E + K++YR YA LYF CVD +++ L
Sbjct: 2 EDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESEL 61
Query: 59 CYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
L+ I FVE L++ F NVCELDL+F+ K N
Sbjct: 62 GILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 95
>DICTYBASE|DDB_G0275405 [details] [associations]
symbol:ap3s1 "sigma adaptin" species:44689
"Dictyostelium discoideum" [GO:0030123 "AP-3 adaptor complex"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 dictyBase:DDB_G0275405
GO:GO:0008565 GO:GO:0006897 GenomeReviews:CM000151_GR GO:GO:0010008
EMBL:AAFI02000013 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 PANTHER:PTHR11753 HSSP:P62743 KO:K12399 OMA:HYNEDTE
PANTHER:PTHR11753:SF2 RefSeq:XP_643675.1 ProteinModelPortal:Q553S2
EnsemblProtists:DDB0234244 GeneID:8619941 KEGG:ddi:DDB_G0275405
ProtClustDB:CLSZ2729186 Uniprot:Q553S2
Length = 171
Score = 196 (74.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 38/99 (38%), Positives = 61/99 (61%)
Query: 77 NVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNV 136
N E+ N + ++ KI+YR YA L+F CVD +++ L ++ I FVE L++ F NV
Sbjct: 48 NFLEIGNNSNIFD-KDTKIIYRHYATLFFIFCVDSSESELSIIDLIQTFVESLDKCFENV 106
Query: 137 CELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRV 175
CELDL+F+ KV+ ++DEM + G + ET+ T + +
Sbjct: 107 CELDLIFHIDKVHYILDEMVMGGLVLETNPTIIFSNYEI 145
Score = 179 (68.1 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 37/96 (38%), Positives = 61/96 (63%)
Query: 2 NFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRN----F----KIVYRRYAGLYFCICVDV 53
++ ++++Q++I E+ +V+ R + NF+E N F KI+YR YA L+F CVD
Sbjct: 22 HYSEEKQQQIIRELFLLVSKRTERSCNFLEIGNNSNIFDKDTKIIYRHYATLFFIFCVDS 81
Query: 54 NDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
+++ L ++ I FVE L++ F NVCELDL+F+ K
Sbjct: 82 SESELSIIDLIQTFVESLDKCFENVCELDLIFHIDK 117
>TAIR|locus:2077922 [details] [associations]
symbol:AT3G50860 species:3702 "Arabidopsis thaliana"
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA;ISS] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030125
"clathrin vesicle coat" evidence=ISS] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 PROSITE:PS00989 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006886 GO:GO:0030117 GO:GO:0008565
GO:GO:0006897 GO:GO:0010008 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753
HOGENOM:HOG000185228 KO:K12399 OMA:IFHADAV PANTHER:PTHR11753:SF2
EMBL:AL049862 EMBL:AY065287 EMBL:AY096709 IPI:IPI00525764
PIR:T08407 RefSeq:NP_190655.2 UniGene:At.28528 UniGene:At.48757
ProteinModelPortal:Q8VZ37 SMR:Q8VZ37 PaxDb:Q8VZ37 PRIDE:Q8VZ37
EnsemblPlants:AT3G50860.1 GeneID:824250 KEGG:ath:AT3G50860
TAIR:At3g50860 InParanoid:Q8VZ37 PhylomeDB:Q8VZ37
ProtClustDB:CLSN2690594 Genevestigator:Q8VZ37 Uniprot:Q8VZ37
Length = 166
Score = 196 (74.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 41/109 (37%), Positives = 66/109 (60%)
Query: 69 EVLNEYFHNVCEL-DLVFNFYKFRNF-----KIVYRRYAGLYFCICVDVNDNNLCYLEAI 122
E++ F +C + V NF + + ++VY+ YA LYF + D ++N L L+ I
Sbjct: 30 ELIRGVFSVLCSRPENVSNFLEIESLFGPDSRLVYKHYATLYFVLVFDGSENELAMLDLI 89
Query: 123 HNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLK 171
VE L++ F NVCELD+VFN+ K++ V+DE+ G++ ETS +V+K
Sbjct: 90 QVLVETLDKCFSNVCELDIVFNYSKMHAVLDEIVFGGQVLETSSAEVMK 138
Score = 164 (62.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 6 DEKQKLIEEVHAVVTVRDAKHTNFVEFRNF-----KIVYRRYAGLYFCICVDVNDNNLCY 60
+++Q+LI V +V+ R +NF+E + ++VY+ YA LYF + D ++N L
Sbjct: 26 EKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDSRLVYKHYATLYFVLVFDGSENELAM 85
Query: 61 LEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L+ I VE L++ F NVCELD+VFN+ K
Sbjct: 86 LDLIQVLVETLDKCFSNVCELDIVFNYSK 114
>UNIPROTKB|F8VXJ4 [details] [associations]
symbol:BRF1 "Transcription factor IIIB 90 kDa subunit"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013150 Pfam:PF00382
GO:GO:0006355 GO:GO:0008270 GO:GO:0006352 GO:GO:0043488
Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
PANTHER:PTHR11618 EMBL:AL512355 HGNC:HGNC:11551 ChiTaRS:BRF1
IPI:IPI01021144 ProteinModelPortal:F8VXJ4 SMR:F8VXJ4
Ensembl:ENST00000550692 ArrayExpress:F8VXJ4 Bgee:F8VXJ4
Uniprot:F8VXJ4
Length = 64
Score = 194 (73.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 34/64 (53%), Positives = 51/64 (79%)
Query: 273 MALSRNLTKGRRQILVCAACVYMTCRLEGTSHLLIDFSELLQICIFELGRTYLRLSQALC 332
MA+SR+LT+GR+ V AAC+Y+ CR EGT H+L+D S+LLQ+ ++ LG+T+L L++ LC
Sbjct: 1 MAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELC 60
Query: 333 ISIP 336
I+ P
Sbjct: 61 INAP 64
>WB|WBGene00000165 [details] [associations]
symbol:aps-3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0009792 GO:GO:0040007
GO:GO:0006915 GO:GO:0006886 GO:GO:0002119 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0010171 GO:GO:0048477
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
PANTHER:PTHR11753 HOGENOM:HOG000185228 KO:K12399
GeneTree:ENSGT00550000074761 OMA:IFHADAV PANTHER:PTHR11753:SF2
EMBL:FO081800 RefSeq:NP_740780.1 ProteinModelPortal:Q8T874
SMR:Q8T874 STRING:Q8T874 PaxDb:Q8T874 EnsemblMetazoa:Y48G8AL.14
GeneID:171691 KEGG:cel:CELE_Y48G8AL.14 UCSC:Y48G8AL.14 CTD:171691
WormBase:Y48G8AL.14 InParanoid:Q8T874 NextBio:872323 Uniprot:Q8T874
Length = 192
Score = 189 (71.6 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 35/113 (30%), Positives = 67/113 (59%)
Query: 62 EAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+ + +++++ NVC +++++YR YA LYF CVD +++ L L+
Sbjct: 30 QIVRETFQLVSKRDDNVCNFLEGGTLIDGNDYRLIYRHYATLYFIFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELR 174
I FVE L+ F NVCELDL+F+ +V+ ++ E+ + G + ET+ ++L+ ++
Sbjct: 90 IQVFVETLDRCFENVCELDLIFHVDRVHHILGEIVMGGMVLETNMNEILQRIQ 142
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 34/91 (37%), Positives = 58/91 (63%)
Query: 2 NFDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVND 55
++ ++++Q+++ E +V+ RD NF+E +++++YR YA LYF CVD ++
Sbjct: 22 HYPEEKQQQIVRETFQLVSKRDDNVCNFLEGGTLIDGNDYRLIYRHYATLYFIFCVDSSE 81
Query: 56 NNLCYLEAIHNFVEVLNEYFHNVCELDLVFN 86
+ L L+ I FVE L+ F NVCELDL+F+
Sbjct: 82 SELGILDLIQVFVETLDRCFENVCELDLIFH 112
>UNIPROTKB|H0YIV6 [details] [associations]
symbol:BRF1 "Transcription factor IIIB 90 kDa subunit"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013150 Pfam:PF00382
GO:GO:0006355 GO:GO:0008270 GO:GO:0006352 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618
EMBL:AL512355 HGNC:HGNC:11551 ChiTaRS:BRF1 Ensembl:ENST00000546417
Uniprot:H0YIV6
Length = 185
Score = 187 (70.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 32/49 (65%), Positives = 43/49 (87%)
Query: 339 DPCLYVLRYSNRLDFGAKTHEVTMTALRILQRMKKDMLHSGRRPNGLIG 387
DPCLY+ R+++ L+FG K HEV+MTALR+LQRMK+D +H+GRRP+GL G
Sbjct: 36 DPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCG 84
>ASPGD|ASPL0000028551 [details] [associations]
symbol:AN5519 species:162425 "Emericella nidulans"
[GO:0006896 "Golgi to vacuole transport" evidence=IEA] [GO:0006623
"protein targeting to vacuole" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030123 "AP-3
adaptor complex" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 GO:GO:0008565 EMBL:BN001305
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
PANTHER:PTHR11753 HOGENOM:HOG000185228 KO:K12399 OMA:IFHADAV
PANTHER:PTHR11753:SF2 OrthoDB:EOG4M3DJV EMBL:AACD01000094
RefSeq:XP_663123.1 ProteinModelPortal:Q5B1R1
EnsemblFungi:CADANIAT00003566 GeneID:2871807 KEGG:ani:AN5519.2
Uniprot:Q5B1R1
Length = 185
Score = 149 (57.5 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 94 KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVD 153
+I YR YA L F + ++ L ++ I FVE L+ F NVCELDL+F F ++ V+
Sbjct: 74 QITYRTYATLSFIMISTSTESPLALIDLIQVFVEALDRIFENVCELDLIFGFETMHAVLS 133
Query: 154 EMFLAGEIRETSQTKVL 170
EM + G + ET+ K++
Sbjct: 134 EMIVGGVVVETNIDKIV 150
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 36 KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 87
+I YR YA L F + ++ L ++ I FVE L+ F NVCELDL+F F
Sbjct: 74 QITYRTYATLSFIMISTSTESPLALIDLIQVFVEALDRIFENVCELDLIFGF 125
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 4 DDDEKQKLIEEVHAVVTVRDAKHTNFV 30
D KQ LI +++ +V R NF+
Sbjct: 24 DTQTKQSLIAQIYDLVAQRPPTACNFL 50
Score = 37 (18.1 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 188 ILEDSV--IVSEMQFEENAHGGTSALGHFVSSDSKGGCQG 225
++E ++ IV+ +Q +E + G A+ S +GG G
Sbjct: 141 VVETNIDKIVAGVQSQEGSLGKKRAIQAASSGVGRGGLSG 180
>DICTYBASE|DDB_G0284905 [details] [associations]
symbol:ap4s1 "sigma adaptin" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 dictyBase:DDB_G0284905 GenomeReviews:CM000153_GR
GO:GO:0008565 EMBL:AAFI02000073 GO:GO:0030659 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753
HSSP:P62743 KO:K12403 OMA:KLVYRQY RefSeq:XP_639923.1
ProteinModelPortal:Q54NZ4 EnsemblProtists:DDB0232330 GeneID:8624835
KEGG:ddi:DDB_G0284905 Uniprot:Q54NZ4
Length = 139
Score = 186 (70.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 35/91 (38%), Positives = 61/91 (67%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F +++++K++YR+YA L+F + VD +N L LE IHN+VE+L+ F NV ++FN
Sbjct: 49 SFVEYKDYKVIYRKYATLFFIVGVDTTENELAILELIHNYVEILDSCFDNV----IMFNL 104
Query: 146 YKVYTVVDEMFLAGEIRETSQTKVLKELRVL 176
K + ++DEM G+I E S+ +L+ + +L
Sbjct: 105 DKAHFILDEMVSNGDIVEISKQHILEFVNLL 135
Score = 156 (60.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 6 DEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIH 65
+E+ + E+ R +FVE++++K++YR+YA L+F + VD +N L LE IH
Sbjct: 27 EERPAMESEIIRKCLSRTEIQCSFVEYKDYKVIYRKYATLFFIVGVDTTENELAILELIH 86
Query: 66 NFVEVLNEYFHNVCELDL 83
N+VE+L+ F NV +L
Sbjct: 87 NYVEILDSCFDNVIMFNL 104
>UNIPROTKB|F1N380 [details] [associations]
symbol:F1N380 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
GeneTree:ENSGT00550000074761 PANTHER:PTHR11753:SF2
EMBL:DAAA02057039 IPI:IPI00842654 Ensembl:ENSBTAT00000048949
OMA:CFENICE Uniprot:F1N380
Length = 159
Score = 185 (70.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 42/118 (35%), Positives = 71/118 (60%)
Query: 69 EVLNEYFHNVCELDL-VFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + K++YR YA LYF CVD +++ L L+
Sbjct: 28 QIIGETFHLVSKRDENICNFLEGGLLIGGSENKLIYRHYATLYFVFCVDSSESELDVLDL 87
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKELRVLRSR 179
I FVE L++ F N+CELDL F+ K++ ++ EM + G + ET+ +++ ++ V +SR
Sbjct: 88 IQVFVETLDKCFENICELDLTFHVDKIHNILAEMVM-GMVLETNMNEIVTQIDV-KSR 143
Score = 170 (64.9 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 38/94 (40%), Positives = 55/94 (58%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDNNL 58
+D +Q++I E +V+ RD NF+E K++YR YA LYF CVD +++ L
Sbjct: 23 EDIQQQIIGETFHLVSKRDENICNFLEGGLLIGGSENKLIYRHYATLYFVFCVDSSESEL 82
Query: 59 CYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRN 92
L+ I FVE L++ F N+CELDL F+ K N
Sbjct: 83 DVLDLIQVFVETLDKCFENICELDLTFHVDKIHN 116
>FB|FBgn0003008 [details] [associations]
symbol:or "orange" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006901 "vesicle coating" evidence=TAS] [GO:0030135 "coated
vesicle" evidence=TAS] [GO:0007269 "neurotransmitter secretion"
evidence=NAS] [GO:0008021 "synaptic vesicle" evidence=TAS]
[GO:0016183 "synaptic vesicle coating" evidence=TAS] [GO:0006726
"eye pigment biosynthetic process" evidence=TAS] [GO:0007040
"lysosome organization" evidence=ISS] [GO:0030123 "AP-3 adaptor
complex" evidence=ISS] [GO:0046907 "intracellular transport"
evidence=TAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0048072 "compound eye pigmentation" evidence=IMP]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989 EMBL:AE013599
GO:GO:0006886 GO:GO:0030117 GO:GO:0008565 GO:GO:0008021
GO:GO:0007040 GO:GO:0046907 GO:GO:0007269 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030 PANTHER:PTHR11753
GO:GO:0016183 GO:GO:0048072 GO:GO:0006727 KO:K12399
GeneTree:ENSGT00550000074761 OMA:IFHADAV PANTHER:PTHR11753:SF2
EMBL:AF228056 EMBL:AY071026 RefSeq:NP_536793.1 UniGene:Dm.3362
SMR:Q9W1E8 STRING:Q9W1E8 EnsemblMetazoa:FBtr0072152 GeneID:43943
KEGG:dme:Dmel_CG3029 UCSC:CG3029-RA CTD:43943 FlyBase:FBgn0003008
InParanoid:Q9W1E8 OrthoDB:EOG4SBCF2 GenomeRNAi:43943 NextBio:836421
Uniprot:Q9W1E8
Length = 191
Score = 183 (69.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
FD+ +Q++I+E +V+ RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVLNEYFHNVCELDLVFN 86
L L+ I FVE L++ F NVCELDL+F+
Sbjct: 83 ELGILDLIQVFVETLDKCFENVCELDLIFH 112
Score = 180 (68.4 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 35/112 (31%), Positives = 65/112 (58%)
Query: 62 EAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+ I +++++ NVC + ++K++YR YA LYF CVD +++ L L+
Sbjct: 30 QIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ V+ ++ E+ + G + +T+ ++ +
Sbjct: 90 IQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVLQTNMNDIMARI 141
>UNIPROTKB|G4MRI2 [details] [associations]
symbol:MGG_02434 "AP-3 complex subunit sigma"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027155 PIRSF:PIRSF015588
GO:GO:0008565 EMBL:CM001231 GO:GO:0006896 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753 KO:K12399
PANTHER:PTHR11753:SF2 RefSeq:XP_003709221.1
ProteinModelPortal:G4MRI2 EnsemblFungi:MGG_02434T0 GeneID:2681531
KEGG:mgr:MGG_02434 Uniprot:G4MRI2
Length = 187
Score = 163 (62.4 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 95 IVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDE 154
+ YR YA LYF + ++ L ++ I +VE L++ F NVCELDL+FNF +++ + E
Sbjct: 76 VTYRNYATLYFIVISTATESPLALIDLIQVYVEALDKLFENVCELDLIFNFETLHSTLSE 135
Query: 155 MFLAGEIRETSQTKVLKELR 174
M + G + ET+ +++ +R
Sbjct: 136 MIVGGVVVETNLDRIVAGVR 155
Score = 131 (51.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 26 HTNFVEFRNFK--IVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDL 83
HT+ E + + YR YA LYF + ++ L ++ I +VE L++ F NVCELDL
Sbjct: 63 HTDSTEQNDVPSLVTYRNYATLYFIVISTATESPLALIDLIQVYVEALDKLFENVCELDL 122
Query: 84 VFNF 87
+FNF
Sbjct: 123 IFNF 126
Score = 39 (18.8 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 8 KQKLIEEVHAVVTVRDAKHTNFV 30
+Q+LI E+ +V+ R NF+
Sbjct: 28 QQRLISEIFTLVSNRPTGSCNFL 50
>UNIPROTKB|E2QRD5 [details] [associations]
symbol:C15orf38-AP3S2 "Protein C15orf38-AP3S2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 EMBL:AC018988 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 InterPro:IPR018889 Pfam:PF10574
EMBL:AC027176 IPI:IPI00966503 RefSeq:NP_001185987.1 UniGene:Hs.6734
ProteinModelPortal:E2QRD5 SMR:E2QRD5 PRIDE:E2QRD5
Ensembl:ENST00000398333 GeneID:100526783 KEGG:hsa:100526783
UCSC:uc002bos.4 CTD:100526783 HGNC:HGNC:38824 OMA:THGRKER
ChiTaRS:C15orf38-AP3S2 GenomeRNAi:100526783 Bgee:E2QRD5
Uniprot:E2QRD5
Length = 394
Score = 198 (74.8 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 40/112 (35%), Positives = 70/112 (62%)
Query: 69 EVLNEYFHNVCELD-LVFNFYKF------RNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 121
+++ E FH V + D + NF + ++K++YR YA LYF CVD +++ L L+
Sbjct: 231 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 290
Query: 122 IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
I FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 291 IQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 342
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/91 (39%), Positives = 56/91 (61%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDNNL 58
++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++ L
Sbjct: 226 EEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESEL 285
Query: 59 CYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 89
L+ I FVE L++ F NVCELDL+F+ K
Sbjct: 286 GILDLIQVFVETLDKCFENVCELDLIFHMDK 316
>POMBASE|SPAC30D11.05 [details] [associations]
symbol:aps3 "AP-3 adaptor complex subunit Aps3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0006896 "Golgi to vacuole
transport" evidence=ISO] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0030123 "AP-3 adaptor complex" evidence=ISO]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989
PomBase:SPAC30D11.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0006886
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0008565
GO:GO:0006896 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
eggNOG:COG5030 PANTHER:PTHR11753 HOGENOM:HOG000185228 GO:GO:0030123
KO:K12399 PANTHER:PTHR11753:SF2 PIR:T38594 RefSeq:NP_593212.1
ProteinModelPortal:Q09905 STRING:Q09905 EnsemblFungi:SPAC30D11.05.1
GeneID:2542114 KEGG:spo:SPAC30D11.05 OMA:CNFLDAP OrthoDB:EOG4M3DJV
NextBio:20803186 Uniprot:Q09905
Length = 165
Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 39/88 (44%), Positives = 54/88 (61%)
Query: 4 DDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF----KIVYRRYAGLYFCICVDVNDNNLC 59
D+ +QKLI +++A V+ R NF+E +I+YR+YA LYF VD ++ L
Sbjct: 24 DESIQQKLIGDIYAAVSTRPPTACNFLESNLIAGKNRIIYRQYATLYFVFVVDEGESELG 83
Query: 60 YLEAIHNFVEVLNEYFHNVCELDLVFNF 87
L+ I FVE L+ F+NVCELDLVF F
Sbjct: 84 ILDLIQVFVEALDRCFNNVCELDLVFKF 111
Score = 170 (64.9 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 94 KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVD 153
+I+YR+YA LYF VD ++ L L+ I FVE L+ F+NVCELDLVF F +++ ++
Sbjct: 60 RIIYRQYATLYFVFVVDEGESELGILDLIQVFVEALDRCFNNVCELDLVFKFQEIHAILA 119
Query: 154 EMFLAGEIRETSQTKVL 170
E+ G + ET+ +++
Sbjct: 120 EVVSGGLVLETNLNEIV 136
>UNIPROTKB|B8ZZZ1 [details] [associations]
symbol:AP1S3 "AP-1 complex subunit sigma-3" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 HOGENOM:HOG000185227 PANTHER:PTHR11753
HOVERGEN:HBG050517 EMBL:AC012512 EMBL:AC093884 HGNC:HGNC:18971
IPI:IPI00916845 ProteinModelPortal:B8ZZZ1 SMR:B8ZZZ1 STRING:B8ZZZ1
Ensembl:ENST00000409375 ArrayExpress:B8ZZZ1 Bgee:B8ZZZ1
Uniprot:B8ZZZ1
Length = 137
Score = 176 (67.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 5 DDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 64
D E++K+ E+ ++ R + ++FV+++ K+VY+RYA LYFC ++ DN L LE +
Sbjct: 25 DKERKKITREIVQIILSRGHRTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIV 84
Query: 65 HNFVEVLNEYFHN 77
H +VE+L++YF N
Sbjct: 85 HRYVELLDKYFGN 97
Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 145
+F ++ K+VY+RYA LYFC ++ DN L LE +H +VE+L++YF N E + F
Sbjct: 48 SFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGN--EFNCWFLL 105
Query: 146 YKVYTVVD 153
++ +V+D
Sbjct: 106 MRLLSVLD 113
>UNIPROTKB|Q86U36 [details] [associations]
symbol:AP4S1 "AP-4 complex subunit sigma-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 GO:GO:0008565 EMBL:CH471078 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 HOGENOM:HOG000185227 PANTHER:PTHR11753
CTD:11154 KO:K12403 RefSeq:NP_001241656.1 UniGene:Hs.293411
GeneID:11154 KEGG:hsa:11154 HGNC:HGNC:575 ChiTaRS:AP4S1
GenomeRNAi:11154 EMBL:AL121808 EMBL:AL049830 EMBL:BX247969
IPI:IPI00384143 SMR:Q86U36 STRING:Q86U36 Ensembl:ENST00000334725
UCSC:uc001wqx.4 Uniprot:Q86U36
Length = 149
Score = 174 (66.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
D K+ L+E EV R + +F+E+++FK++YR+YA L+ + V+ +N + E
Sbjct: 24 DINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEF 83
Query: 64 IHNFVEVLNEYFHNVCELDLVF 85
IHNFVEVL+EYF V ELD+ F
Sbjct: 84 IHNFVEVLDEYFSRVSELDVSF 105
Score = 161 (61.7 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 51 VDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVD 110
VD+N L E I + + NE C +F ++++FK++YR+YA L+ + V+
Sbjct: 23 VDINKRTLLETEVIKSCLSRSNEQ----C------SFIEYKDFKLIYRQYAALFIVVGVN 72
Query: 111 VNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVY 149
+N + E IHNFVEVL+EYF V ELD+ F F V+
Sbjct: 73 DTENEMAIYEFIHNFVEVLDEYFSRVSELDVSF-FNTVF 110
>UNIPROTKB|H0YLI7 [details] [associations]
symbol:AP3S2 "Adaptor-related protein complex 3, sigma 2
subunit, isoform CRA_d" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030123 "AP-3
adaptor complex" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 EMBL:CH471101 EMBL:AC018988
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
PANTHER:PTHR11753:SF2 UniGene:Hs.632161 HGNC:HGNC:571 ChiTaRS:AP3S2
EMBL:AC027176 ProteinModelPortal:H0YLI7 SMR:H0YLI7
Ensembl:ENST00000558011 Bgee:H0YLI7 Uniprot:H0YLI7
Length = 205
Score = 162 (62.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 92 NFKIVYRRYAGLYFCICVDVNDNNLCYLEAI--HN----------FVEVLNEYFHNVCEL 139
++K++YR YA LYF CVD +++ L L+ I H FVE L++ F NVCEL
Sbjct: 60 DYKLIYRHYATLYFVFCVDSSESELGILDLIQVHLEVVFFIAPKVFVETLDKCFENVCEL 119
Query: 140 DLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
DL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 120 DLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 153
Score = 145 (56.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 38/105 (36%), Positives = 58/105 (55%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAI--HN----------FVEVLNEYFHNVCELDLVFNFYK 89
L L+ I H FVE L++ F NVCELDL+F+ K
Sbjct: 83 ELGILDLIQVHLEVVFFIAPKVFVETLDKCFENVCELDLIFHMDK 127
>UNIPROTKB|G3V2N8 [details] [associations]
symbol:AP4S1 "AP-4 complex subunit sigma-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR011012 InterPro:IPR016635
PIRSF:PIRSF015588 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 CTD:11154 KO:K12403
RefSeq:NP_001241655.1 UniGene:Hs.293411 GeneID:11154 KEGG:hsa:11154
HGNC:HGNC:575 ChiTaRS:AP4S1 GenomeRNAi:11154 EMBL:AL121808
EMBL:AL049830 ProteinModelPortal:G3V2N8 SMR:G3V2N8 PRIDE:G3V2N8
Ensembl:ENST00000554345 ArrayExpress:G3V2N8 Bgee:G3V2N8
Uniprot:G3V2N8
Length = 135
Score = 158 (60.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
D K+ L+E EV R + +F+E+++FK++YR+YA L+ + V+ +N + E
Sbjct: 24 DINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEF 83
Query: 64 IHNFVEVLNEYFHNVCELD 82
IHNFVEVL+EYF V +D
Sbjct: 84 IHNFVEVLDEYFSRVEPID 102
Score = 144 (55.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 33/90 (36%), Positives = 51/90 (56%)
Query: 51 VDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVD 110
VD+N L E I + + NE C +F ++++FK++YR+YA L+ + V+
Sbjct: 23 VDINKRTLLETEVIKSCLSRSNEQ----C------SFIEYKDFKLIYRQYAALFIVVGVN 72
Query: 111 VNDNNLCYLEAIHNFVEVLNEYFHNVCELD 140
+N + E IHNFVEVL+EYF V +D
Sbjct: 73 DTENEMAIYEFIHNFVEVLDEYFSRVEPID 102
>UNIPROTKB|G3V4P7 [details] [associations]
symbol:AP4S1 "AP-4 complex subunit sigma-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR011012 InterPro:IPR016635 GO:GO:0008565
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
HGNC:HGNC:575 ChiTaRS:AP4S1 EMBL:AL121808 EMBL:AL049830
ProteinModelPortal:G3V4P7 SMR:G3V4P7 PRIDE:G3V4P7
Ensembl:ENST00000556232 ArrayExpress:G3V4P7 Bgee:G3V4P7
Uniprot:G3V4P7
Length = 98
Score = 155 (59.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
D K+ L+E EV R + +F+E+++FK++YR+YA L+ + V+ +N + E
Sbjct: 24 DINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEF 83
Query: 64 IHNFVEVLNEYFHNV 78
IHNFVEVL+EYF V
Sbjct: 84 IHNFVEVLDEYFSRV 98
Score = 141 (54.7 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 51 VDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVD 110
VD+N L E I + + NE C +F ++++FK++YR+YA L+ + V+
Sbjct: 23 VDINKRTLLETEVIKSCLSRSNEQ----C------SFIEYKDFKLIYRQYAALFIVVGVN 72
Query: 111 VNDNNLCYLEAIHNFVEVLNEYFHNV 136
+N + E IHNFVEVL+EYF V
Sbjct: 73 DTENEMAIYEFIHNFVEVLDEYFSRV 98
>UNIPROTKB|G3V5J6 [details] [associations]
symbol:AP4S1 "Adaptor-related protein complex 4, sigma 1
subunit, isoform CRA_e" species:9606 "Homo sapiens" [GO:0008565
"protein transporter activity" evidence=IEA] InterPro:IPR011012
InterPro:IPR016635 PIRSF:PIRSF015588 GO:GO:0008565 EMBL:CH471078
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
UniGene:Hs.293411 HGNC:HGNC:575 ChiTaRS:AP4S1 EMBL:AL121808
EMBL:AL049830 ProteinModelPortal:G3V5J6 SMR:G3V5J6 PRIDE:G3V5J6
Ensembl:ENST00000554609 ArrayExpress:G3V5J6 Bgee:G3V5J6
Uniprot:G3V5J6
Length = 102
Score = 155 (59.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 5 DDEKQKLIE-EVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 63
D K+ L+E EV R + +F+E+++FK++YR+YA L+ + V+ +N + E
Sbjct: 24 DINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEF 83
Query: 64 IHNFVEVLNEYFHNV 78
IHNFVEVL+EYF V
Sbjct: 84 IHNFVEVLDEYFSRV 98
Score = 141 (54.7 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 51 VDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKFRNFKIVYRRYAGLYFCICVD 110
VD+N L E I + + NE C +F ++++FK++YR+YA L+ + V+
Sbjct: 23 VDINKRTLLETEVIKSCLSRSNEQ----C------SFIEYKDFKLIYRQYAALFIVVGVN 72
Query: 111 VNDNNLCYLEAIHNFVEVLNEYFHNV 136
+N + E IHNFVEVL+EYF V
Sbjct: 73 DTENEMAIYEFIHNFVEVLDEYFSRV 98
>UNIPROTKB|H0YJI3 [details] [associations]
symbol:AP4S1 "AP-4 complex subunit sigma-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR011012 InterPro:IPR016635 GO:GO:0008565
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
HGNC:HGNC:575 ChiTaRS:AP4S1 EMBL:AL121808 EMBL:AL049830
Ensembl:ENST00000556480 Bgee:H0YJI3 Uniprot:H0YJI3
Length = 83
Score = 149 (57.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 22 RDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCEL 81
R + +F+E+++FK++YR+YA L+ + V+ +N + E IHNFVEVL+EYF V L
Sbjct: 9 RSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVVSL 68
Score = 138 (53.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 86 NFYKFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCEL 139
+F ++++FK++YR+YA L+ + V+ +N + E IHNFVEVL+EYF V L
Sbjct: 15 SFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVVSL 68
>GENEDB_PFALCIPARUM|PFL2425w [details] [associations]
symbol:PFL2425w "adaptor-related protein complex
3, sigma 2 subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0030125 "clathrin vesicle coat" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886 GO:GO:0016192
GO:GO:0008565 EMBL:AE014188 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 GO:GO:0030125
HOGENOM:HOG000185228 KO:K12399 OMA:IFHADAV PANTHER:PTHR11753:SF2
RefSeq:XP_001350889.1 ProteinModelPortal:Q8I4S9 PRIDE:Q8I4S9
EnsemblProtists:PFL2425w:mRNA GeneID:811537 KEGG:pfa:PFL2425w
EuPathDB:PlasmoDB:PF3D7_1250500 ProtClustDB:CLSZ2433656
Uniprot:Q8I4S9
Length = 153
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 92 NFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTV 151
+ K+VYR +A LYF +D ++ L L+ I +VL+ F NVCELDL++N+ ++ +
Sbjct: 60 DIKVVYRHFATLYFVFIIDSMESELGILDLI----QVLDSNFENVCELDLIYNYEQINYI 115
Query: 152 VDEMFLAGEIRETSQTKVLKEL 173
+DE+ + G + ET+ ++ +
Sbjct: 116 LDEIIMGGIVLETNIDTIIDSI 137
Score = 126 (49.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 7 EKQKLI-EEVHAVVTVR-DAKHTNFVE----FRN-FKIVYRRYAGLYFCICVDVNDNNLC 59
EKQ+LI + V+ ++ R D + F+E F + K+VYR +A LYF +D ++ L
Sbjct: 26 EKQQLITKRVYELIKNRLDRECCCFIEDEELFSSDIKVVYRHFATLYFVFIIDSMESELG 85
Query: 60 YLEAIHNFVEVLNEYFHNVCELDLVFNF 87
L+ I +VL+ F NVCELDL++N+
Sbjct: 86 ILDLI----QVLDSNFENVCELDLIYNY 109
>UNIPROTKB|Q8I4S9 [details] [associations]
symbol:PFL2425w "Adaptor-related protein complex 3, sigma 2
subunit, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003674 "molecular_function" evidence=ND] [GO:0030125 "clathrin
vesicle coat" evidence=ISS] InterPro:IPR000804 InterPro:IPR011012
InterPro:IPR016635 InterPro:IPR027155 PIRSF:PIRSF015588
PROSITE:PS00989 GO:GO:0006886 GO:GO:0016192 GO:GO:0008565
EMBL:AE014188 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 GO:GO:0030125 HOGENOM:HOG000185228 KO:K12399
OMA:IFHADAV PANTHER:PTHR11753:SF2 RefSeq:XP_001350889.1
ProteinModelPortal:Q8I4S9 PRIDE:Q8I4S9
EnsemblProtists:PFL2425w:mRNA GeneID:811537 KEGG:pfa:PFL2425w
EuPathDB:PlasmoDB:PF3D7_1250500 ProtClustDB:CLSZ2433656
Uniprot:Q8I4S9
Length = 153
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 92 NFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTV 151
+ K+VYR +A LYF +D ++ L L+ I +VL+ F NVCELDL++N+ ++ +
Sbjct: 60 DIKVVYRHFATLYFVFIIDSMESELGILDLI----QVLDSNFENVCELDLIYNYEQINYI 115
Query: 152 VDEMFLAGEIRETSQTKVLKEL 173
+DE+ + G + ET+ ++ +
Sbjct: 116 LDEIIMGGIVLETNIDTIIDSI 137
Score = 126 (49.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 7 EKQKLI-EEVHAVVTVR-DAKHTNFVE----FRN-FKIVYRRYAGLYFCICVDVNDNNLC 59
EKQ+LI + V+ ++ R D + F+E F + K+VYR +A LYF +D ++ L
Sbjct: 26 EKQQLITKRVYELIKNRLDRECCCFIEDEELFSSDIKVVYRHFATLYFVFIIDSMESELG 85
Query: 60 YLEAIHNFVEVLNEYFHNVCELDLVFNF 87
L+ I +VL+ F NVCELDL++N+
Sbjct: 86 ILDLI----QVLDSNFENVCELDLIYNY 109
>SGD|S000003561 [details] [associations]
symbol:APS3 "Small subunit of the clathrin-associated adaptor
complex AP-3" species:4932 "Saccharomyces cerevisiae" [GO:0015031
"protein transport" evidence=IEA] [GO:0030659 "cytoplasmic vesicle
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006896 "Golgi to
vacuole transport" evidence=IMP] [GO:0006623 "protein targeting to
vacuole" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA;IMP] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000804
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 PROSITE:PS00989 SGD:S000003561 GO:GO:0005794
EMBL:BK006943 GO:GO:0008565 GO:GO:0030659 GO:GO:0006896
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 eggNOG:COG5030
PANTHER:PTHR11753 HOGENOM:HOG000185228 GO:GO:0030123 GO:GO:0006623
GeneTree:ENSGT00550000074761 OMA:IFHADAV PANTHER:PTHR11753:SF2
OrthoDB:EOG4M3DJV EMBL:U31448 EMBL:Z49299 PIR:S56796
RefSeq:NP_012510.3 RefSeq:NP_012515.4 ProteinModelPortal:P47064
SMR:P47064 DIP:DIP-3978N IntAct:P47064 MINT:MINT-565998
STRING:P47064 PaxDb:P47064 EnsemblFungi:YJL024C GeneID:853429
GeneID:853434 KEGG:sce:YJL019W KEGG:sce:YJL024C CYGD:YJL024c
NextBio:973968 Genevestigator:P47064 GermOnline:YJL024C
Uniprot:P47064
Length = 194
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 92 NFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTV 151
+ +I+Y+ YA LYF VD ++ L L+ I FVE L+ F V ELDL+FN+ + +V
Sbjct: 72 DIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVESLDRCFTEVNELDLIFNWQTLESV 131
Query: 152 VDEMFLAGEIRETSQTKVL 170
++E+ G + ET+ +++
Sbjct: 132 LEEIVQGGMVIETNVNRIV 150
Score = 121 (47.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 30 VEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNF 87
V + +I+Y+ YA LYF VD ++ L L+ I FVE L+ F V ELDL+FN+
Sbjct: 68 VNNEDIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVESLDRCFTEVNELDLIFNW 125
>RGD|1586888 [details] [associations]
symbol:Ap3s2 "adaptor-related protein complex 3, sigma 2
subunit" species:10116 "Rattus norvegicus" [GO:0008089 "anterograde
axon cargo transport" evidence=IEA;ISO] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA;ISO] [GO:0048490 "anterograde synaptic
vesicle transport" evidence=IEA;ISO] InterPro:IPR011012
InterPro:IPR016635 RGD:1586888 GO:GO:0008565 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
GeneTree:ENSGT00550000074761 IPI:IPI00767437
Ensembl:ENSRNOT00000068084 UCSC:RGD:1586888 Uniprot:F1LVM4
Length = 102
Score = 114 (45.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 125 FVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 2 FVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 50
>UNIPROTKB|H0YLX6 [details] [associations]
symbol:AP3S2 "AP-3 complex subunit sigma-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 EMBL:AC018988
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
PANTHER:PTHR11753:SF2 HGNC:HGNC:571 ChiTaRS:AP3S2 EMBL:AC027176
ProteinModelPortal:H0YLX6 SMR:H0YLX6 Ensembl:ENST00000558999
Bgee:H0YLX6 Uniprot:H0YLX6
Length = 136
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAIHNFVEVL 71
L L+ I +EV+
Sbjct: 83 ELGILDLIQVHLEVV 97
>UNIPROTKB|F1NXP2 [details] [associations]
symbol:GTF2B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046966 "thyroid hormone receptor binding"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008270 GO:GO:0006352 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618 PROSITE:PS00782
InterPro:IPR023486 GeneTree:ENSGT00390000006671 OMA:VLRWRKW
EMBL:AADN02012841 IPI:IPI00571339 Ensembl:ENSGALT00000010015
Uniprot:F1NXP2
Length = 306
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 34/145 (23%), Positives = 71/145 (48%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 99 SSDRAMMNAFKEITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIAC 158
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKT 357
R EG + + +I E+GR + + +AL S+ + ++ R+ + L
Sbjct: 159 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGL---P 215
Query: 358 HEVTMTALRILQRMKKDMLHSGRRP 382
+V M A I ++ + L GR P
Sbjct: 216 KQVQMAATHIARKAVELDLVPGRSP 240
>UNIPROTKB|F2Z4J6 [details] [associations]
symbol:LOC786656 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0046966 "thyroid hormone receptor binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008270 GO:GO:0006352 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618 PROSITE:PS00782
OMA:WRAFDPD InterPro:IPR023486 IPI:IPI00697087 UniGene:Bt.39806
GeneTree:ENSGT00390000006671 EMBL:DAAA02007976
ProteinModelPortal:F2Z4J6 SMR:F2Z4J6 PRIDE:F2Z4J6
Ensembl:ENSBTAT00000044137 Uniprot:F2Z4J6
Length = 316
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/145 (23%), Positives = 71/145 (48%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 109 SSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIAC 168
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKT 357
R EG + + +I E+GR + + +AL S+ + ++ R+ + L
Sbjct: 169 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLP 225
Query: 358 HEVTMTALRILQRMKKDMLHSGRRP 382
+V M A I ++ + L GR P
Sbjct: 226 KQVQMAATHIARKAVELDLVPGRSP 250
>UNIPROTKB|Q2KIN8 [details] [associations]
symbol:GTF2B "Transcription initiation factor IIB"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA]
InterPro:IPR000812 InterPro:IPR013137 InterPro:IPR013150
Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685 PROSITE:PS51134
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG1405 PANTHER:PTHR11618 PROSITE:PS00782
HOGENOM:HOG000108634 KO:K03124 InterPro:IPR023486 EMBL:BC112570
IPI:IPI00697087 RefSeq:NP_001039607.1 UniGene:Bt.39806
ProteinModelPortal:Q2KIN8 SMR:Q2KIN8 STRING:Q2KIN8 PRIDE:Q2KIN8
GeneID:513231 KEGG:bta:513231 CTD:2959 HOVERGEN:HBG017914
InParanoid:Q2KIN8 OrthoDB:EOG4QRH4F NextBio:20870763 Uniprot:Q2KIN8
Length = 316
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/145 (23%), Positives = 71/145 (48%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 109 SSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIAC 168
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKT 357
R EG + + +I E+GR + + +AL S+ + ++ R+ + L
Sbjct: 169 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLP 225
Query: 358 HEVTMTALRILQRMKKDMLHSGRRP 382
+V M A I ++ + L GR P
Sbjct: 226 KQVQMAATHIARKAVELDLVPGRSP 250
>UNIPROTKB|E2RPG1 [details] [associations]
symbol:GTF2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046966 "thyroid hormone receptor binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008270 GO:GO:0006352 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618 PROSITE:PS00782
KO:K03124 OMA:WRAFDPD InterPro:IPR023486 CTD:2959
GeneTree:ENSGT00390000006671 EMBL:AAEX03004837 RefSeq:XP_537085.1
ProteinModelPortal:E2RPG1 SMR:E2RPG1 PRIDE:E2RPG1
Ensembl:ENSCAFT00000032192 GeneID:479960 KEGG:cfa:479960
NextBio:20855065 Uniprot:E2RPG1
Length = 316
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/145 (23%), Positives = 71/145 (48%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 109 SSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIAC 168
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKT 357
R EG + + +I E+GR + + +AL S+ + ++ R+ + L
Sbjct: 169 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLP 225
Query: 358 HEVTMTALRILQRMKKDMLHSGRRP 382
+V M A I ++ + L GR P
Sbjct: 226 KQVQMAATHIARKAVELDLVPGRSP 250
>UNIPROTKB|Q00403 [details] [associations]
symbol:GTF2B "Transcription initiation factor IIB"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046966 "thyroid hormone receptor
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0006368 "transcription elongation from
RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000812
InterPro:IPR013137 InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271
PRINTS:PR00685 PROSITE:PS51134 Reactome:REACT_116125 GO:GO:0019048
GO:GO:0005654 GO:GO:0016032 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006368 GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
Reactome:REACT_1788 eggNOG:COG1405 PANTHER:PTHR11618
PROSITE:PS00782 EMBL:AL445991 PDB:1VOL PDBsum:1VOL PDB:1C9B
PDBsum:1C9B HOGENOM:HOG000108634 KO:K03124 OMA:WRAFDPD
InterPro:IPR023486 CTD:2959 HOVERGEN:HBG017914 OrthoDB:EOG4QRH4F
EMBL:X59268 EMBL:M76766 EMBL:AK289822 EMBL:AB451296 EMBL:BC020597
EMBL:S44184 IPI:IPI00022820 PIR:S17654 RefSeq:NP_001505.1
UniGene:Hs.481852 PDB:1DL6 PDB:1RLY PDB:1RO4 PDB:1TFB PDB:2PHG
PDBsum:1DL6 PDBsum:1RLY PDBsum:1RO4 PDBsum:1TFB PDBsum:2PHG
ProteinModelPortal:Q00403 SMR:Q00403 DIP:DIP-1077N IntAct:Q00403
MINT:MINT-156550 STRING:Q00403 PhosphoSite:Q00403 DMDM:135629
PaxDb:Q00403 PeptideAtlas:Q00403 PRIDE:Q00403 DNASU:2959
Ensembl:ENST00000370500 GeneID:2959 KEGG:hsa:2959 UCSC:uc001dmo.4
GeneCards:GC01M089318 HGNC:HGNC:4648 MIM:189963 neXtProt:NX_Q00403
PharmGKB:PA29035 InParanoid:Q00403 PhylomeDB:Q00403 ChiTaRS:GTF2B
EvolutionaryTrace:Q00403 GenomeRNAi:2959 NextBio:11730
PMAP-CutDB:Q00403 ArrayExpress:Q00403 Bgee:Q00403 CleanEx:HS_GTF2B
Genevestigator:Q00403 GermOnline:ENSG00000137947 Uniprot:Q00403
Length = 316
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/145 (23%), Positives = 71/145 (48%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 109 SSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIAC 168
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKT 357
R EG + + +I E+GR + + +AL S+ + ++ R+ + L
Sbjct: 169 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLP 225
Query: 358 HEVTMTALRILQRMKKDMLHSGRRP 382
+V M A I ++ + L GR P
Sbjct: 226 KQVQMAATHIARKAVELDLVPGRSP 250
>UNIPROTKB|F2Z5J6 [details] [associations]
symbol:GTF2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046966 "thyroid hormone receptor binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008270 GO:GO:0006352 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618 PROSITE:PS00782
InterPro:IPR023486 GeneTree:ENSGT00390000006671 OMA:VLRWRKW
EMBL:CU179630 EMBL:CU151869 Ensembl:ENSSSCT00000007587
Uniprot:F2Z5J6
Length = 316
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/145 (23%), Positives = 71/145 (48%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 109 SSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIAC 168
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKT 357
R EG + + +I E+GR + + +AL S+ + ++ R+ + L
Sbjct: 169 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLP 225
Query: 358 HEVTMTALRILQRMKKDMLHSGRRP 382
+V M A I ++ + L GR P
Sbjct: 226 KQVQMAATHIARKAVELDLVPGRSP 250
>MGI|MGI:2385191 [details] [associations]
symbol:Gtf2b "general transcription factor IIB"
species:10090 "Mus musculus" [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046966 "thyroid hormone
receptor binding" evidence=ISO] InterPro:IPR000812
InterPro:IPR013137 InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271
PRINTS:PR00685 PROSITE:PS51134 MGI:MGI:2385191 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006352
GO:GO:0001047 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG1405 PANTHER:PTHR11618 PROSITE:PS00782
HOGENOM:HOG000108634 KO:K03124 OMA:WRAFDPD InterPro:IPR023486
CTD:2959 HOVERGEN:HBG017914 OrthoDB:EOG4QRH4F EMBL:BC016637
IPI:IPI00153874 RefSeq:NP_663521.1 UniGene:Mm.271756
ProteinModelPortal:P62915 SMR:P62915 STRING:P62915
PhosphoSite:P62915 PaxDb:P62915 PRIDE:P62915
Ensembl:ENSMUST00000029938 GeneID:229906 KEGG:mmu:229906
InParanoid:P62915 NextBio:379735 Bgee:P62915 CleanEx:MM_GTF2B
Genevestigator:P62915 GermOnline:ENSMUSG00000028271 Uniprot:P62915
Length = 316
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/145 (23%), Positives = 71/145 (48%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 109 SSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIAC 168
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKT 357
R EG + + +I E+GR + + +AL S+ + ++ R+ + L
Sbjct: 169 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLP 225
Query: 358 HEVTMTALRILQRMKKDMLHSGRRP 382
+V M A I ++ + L GR P
Sbjct: 226 KQVQMAATHIARKAVELDLVPGRSP 250
>RGD|619735 [details] [associations]
symbol:Gtf2b "general transcription factor IIB" species:10116
"Rattus norvegicus" [GO:0001047 "core promoter binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0046966 "thyroid hormone receptor binding"
evidence=IEA;ISO] InterPro:IPR000812 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 RGD:619735 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006352
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG1405 PANTHER:PTHR11618 PROSITE:PS00782
HOGENOM:HOG000108634 KO:K03124 OMA:WRAFDPD InterPro:IPR023486
CTD:2959 HOVERGEN:HBG017914 OrthoDB:EOG4QRH4F
GeneTree:ENSGT00390000006671 EMBL:X65948 EMBL:BC085345
IPI:IPI00200556 PIR:S26299 RefSeq:NP_112303.1 UniGene:Rn.6109
ProteinModelPortal:P62916 SMR:P62916 IntAct:P62916 STRING:P62916
PRIDE:P62916 Ensembl:ENSRNOT00000015032 GeneID:81673 KEGG:rno:81673
InParanoid:P62916 NextBio:615268 Genevestigator:P62916
Uniprot:P62916
Length = 316
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/145 (23%), Positives = 71/145 (48%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 109 SSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIAC 168
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKT 357
R EG + + +I E+GR + + +AL S+ + ++ R+ + L
Sbjct: 169 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL---CLP 225
Query: 358 HEVTMTALRILQRMKKDMLHSGRRP 382
+V M A I ++ + L GR P
Sbjct: 226 KQVQMAATHIARKAVELDLVPGRSP 250
>ZFIN|ZDB-GENE-030131-3544 [details] [associations]
symbol:gtf2b "general transcription factor IIB"
species:7955 "Danio rerio" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0017025 "TBP-class protein
binding" evidence=IEA] InterPro:IPR000812 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 ZFIN:ZDB-GENE-030131-3544 GO:GO:0006355
GO:GO:0008270 GO:GO:0006352 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618 PROSITE:PS00782
KO:K03124 InterPro:IPR023486 CTD:2959 HOVERGEN:HBG017914
HSSP:Q00403 EMBL:BC055569 IPI:IPI00501186 RefSeq:NP_955991.1
UniGene:Dr.78599 ProteinModelPortal:Q7SX98 SMR:Q7SX98 STRING:Q7SX98
GeneID:324823 KEGG:dre:324823 NextBio:20808979 ArrayExpress:Q7SX98
Uniprot:Q7SX98
Length = 316
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 33/138 (23%), Positives = 68/138 (49%)
Query: 245 NCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTCRLEGTSH 304
N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ CR EG
Sbjct: 116 NAFKEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPR 175
Query: 305 LLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKTHEVTMTA 364
+ + +I E+GR + + +AL S+ + ++ R+ + L +V M A
Sbjct: 176 TFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGL---PKQVQMAA 232
Query: 365 LRILQRMKKDMLHSGRRP 382
I ++ + L GR P
Sbjct: 233 TYIARKAVELDLVPGRSP 250
>UNIPROTKB|F8VWY1 [details] [associations]
symbol:BRF1 "Transcription factor IIIB 90 kDa subunit"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013150 Pfam:PF00382
GO:GO:0006355 GO:GO:0008270 GO:GO:0006352 GO:GO:0043488
Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
PANTHER:PTHR11618 EMBL:AL512355 HGNC:HGNC:11551 ChiTaRS:BRF1
IPI:IPI01025938 ProteinModelPortal:F8VWY1 SMR:F8VWY1
Ensembl:ENST00000550208 ArrayExpress:F8VWY1 Bgee:F8VWY1
Uniprot:F8VWY1
Length = 45
Score = 106 (42.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 362 MTALRILQRMKKDMLHSGRRPNGLIG 387
MTALR+LQRMK+D +H+GRRP+GL G
Sbjct: 1 MTALRLLQRMKRDWMHTGRRPSGLCG 26
>UNIPROTKB|I3LCQ3 [details] [associations]
symbol:BRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA]
InterPro:IPR000812 InterPro:IPR013150 Pfam:PF00382 GO:GO:0006355
GO:GO:0008270 GO:GO:0006352 GO:GO:0043488 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618
GeneTree:ENSGT00390000010349 Ensembl:ENSSSCT00000031183 OMA:DEICSYQ
Uniprot:I3LCQ3
Length = 99
Score = 106 (42.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 362 MTALRILQRMKKDMLHSGRRPNGLIG 387
MTALR+LQRMK+D +H+GRRP+GL G
Sbjct: 1 MTALRLLQRMKRDWMHTGRRPSGLCG 26
>UNIPROTKB|B4DGQ3 [details] [associations]
symbol:AP3S2 "cDNA FLJ54714, moderately similar to
Adapter-related protein complex 3 sigma- 2 subunit" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
InterPro:IPR000804 InterPro:IPR011012 InterPro:IPR016635
InterPro:IPR027155 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 EMBL:CH471101
EMBL:AC018988 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
PANTHER:PTHR11753 PANTHER:PTHR11753:SF2 UniGene:Hs.632161
HGNC:HGNC:571 ChiTaRS:AP3S2 EMBL:AC027176 EMBL:AK294712
IPI:IPI00911012 SMR:B4DGQ3 STRING:B4DGQ3 Ensembl:ENST00000423566
Ensembl:ENST00000560251 HOGENOM:HOG000069929 Uniprot:B4DGQ3
Length = 124
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 3 FDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RNFKIVYRRYAGLYFCICVDVNDN 56
F ++ +Q+++ E +V RD NF+E ++K++YR YA LYF CVD +++
Sbjct: 23 FPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSES 82
Query: 57 NLCYLEAI 64
L L+ I
Sbjct: 83 ELGILDLI 90
>UNIPROTKB|F8VQ19 [details] [associations]
symbol:BRF1 "Transcription factor IIIB 90 kDa subunit"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
InterPro:IPR000812 InterPro:IPR011665 Pfam:PF07741 GO:GO:0005634
GO:GO:0045893 GO:GO:0008270 GO:GO:0006352 GO:GO:0043488
PANTHER:PTHR11618 EMBL:AL512355 HGNC:HGNC:11551 ChiTaRS:BRF1
IPI:IPI01021565 Ensembl:ENST00000547562 ArrayExpress:F8VQ19
Bgee:F8VQ19 Uniprot:F8VQ19
Length = 281
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 36/87 (41%), Positives = 41/87 (47%)
Query: 475 YILTEGEATNKAKLWEVLNREYLTLQXXXXXXXXXXXXXXXXXXXXXXXXXTS----VAK 530
YIL E EA KA+LW N EYL Q A
Sbjct: 180 YILNESEARVKAELWMRENAEYLREQREKEARIAKEKELGIYKEHKPKKSCKRREPIQAS 239
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSL 557
TA EAIEKML++KKIS+KINY VL+ L
Sbjct: 240 TAREAIEKMLEQKKISSKINYSVLRGL 266
>UNIPROTKB|B1APE2 [details] [associations]
symbol:GTF2B "Transcription initiation factor IIB"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 GO:GO:0006355 GO:GO:0008270 GO:GO:0006352
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR11618 PROSITE:PS00782 EMBL:AL445991
HOGENOM:HOG000108634 InterPro:IPR023486 HOVERGEN:HBG017914
UniGene:Hs.481852 HGNC:HGNC:4648 ChiTaRS:GTF2B IPI:IPI00643006
SMR:B1APE2 STRING:B1APE2 Ensembl:ENST00000418217 Uniprot:B1APE2
Length = 231
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 26/114 (22%), Positives = 59/114 (51%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 104 SSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIAC 163
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRL 351
R EG + + +I E+GR + + +AL S+ + ++ R+ + L
Sbjct: 164 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNL 217
>UNIPROTKB|H0YL85 [details] [associations]
symbol:C15orf38-AP3S2 "Protein C15orf38-AP3S2" species:9606
"Homo sapiens" [GO:0006810 "transport" evidence=IEA]
InterPro:IPR011012 GO:GO:0006810 EMBL:AC018988 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF64356 InterPro:IPR018889 Pfam:PF10574
EMBL:AC027176 HGNC:HGNC:38824 ChiTaRS:C15orf38-AP3S2
Ensembl:ENST00000558648 Bgee:H0YL85 Uniprot:H0YL85
Length = 185
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 125 FVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKEL 173
FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ ++
Sbjct: 130 FVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQI 178
>UNIPROTKB|C9JZK4 [details] [associations]
symbol:AP1S3 "AP-1 complex subunit sigma-3" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR011012 InterPro:IPR016635 GO:GO:0008565
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 PANTHER:PTHR11753
EMBL:AC012512 EMBL:AC093884 HGNC:HGNC:18971 IPI:IPI00917154
ProteinModelPortal:C9JZK4 SMR:C9JZK4 STRING:C9JZK4
Ensembl:ENST00000444408 ArrayExpress:C9JZK4 Bgee:C9JZK4
Uniprot:C9JZK4
Length = 56
Score = 98 (39.6 bits), Expect = 0.00041, P = 0.00041
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 135 NVCELDLVFNFYKVYTVVDEMFLAGEIR 162
NVCELD++FNF K Y ++DE + GEI+
Sbjct: 29 NVCELDIIFNFEKAYFILDEFIIGGEIQ 56
>UNIPROTKB|B1APE1 [details] [associations]
symbol:GTF2B "Transcription initiation factor IIB"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013137
InterPro:IPR013150 Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685
PROSITE:PS51134 GO:GO:0006355 GO:GO:0008270 GO:GO:0006352
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR11618 PROSITE:PS00782 EMBL:AL445991
HOGENOM:HOG000108634 InterPro:IPR023486 HOVERGEN:HBG017914
UniGene:Hs.481852 HGNC:HGNC:4648 ChiTaRS:GTF2B IPI:IPI00643469
SMR:B1APE1 STRING:B1APE1 Ensembl:ENST00000448623 Uniprot:B1APE1
Length = 224
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 24/98 (24%), Positives = 52/98 (53%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + + N + I+++ +++ L ++ ++ + NL+K + KGR + +AC+Y+ C
Sbjct: 108 SSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIAC 167
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISI 335
R EG + + +I E+GR + + +AL S+
Sbjct: 168 RQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSV 205
>TAIR|locus:4515102612 [details] [associations]
symbol:AT1G30455 species:3702 "Arabidopsis thaliana"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000812
InterPro:IPR011665 InterPro:IPR013150 Pfam:PF00382 Pfam:PF07741
EMBL:CP002684 GO:GO:0005634 GO:GO:0045893 GO:GO:0008270
GO:GO:0006352 GO:GO:0003743 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618 UniGene:At.69479
IPI:IPI00542754 RefSeq:NP_001117389.1 ProteinModelPortal:F4I4V4
SMR:F4I4V4 EnsemblPlants:AT1G30455.1 GeneID:6240845
KEGG:ath:AT1G30455 Uniprot:F4I4V4
Length = 254
Score = 103 (41.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 338 MDPCLYVLRYSNRLDFGAKTHEVTMTALRILQRMKKDMLHSGRRPNGLIG 387
+DP ++ R+SN+L GA +V TA I+ MK + + +GR+P+G+ G
Sbjct: 14 VDPSTFIPRFSNKLLKGAHNKQVVETATHIIASMKSNWMQTGRKPSGICG 63
Score = 53 (23.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 531 TAGEAIEKMLKEKKISTKINYDVLKSL-DFTVDVNTGEMSTE-----QKSAPRIIEN 581
TA EA++ M+K KK N D L+ L D + + + TE K I+EN
Sbjct: 190 TAMEAVDSMVKRKKFPDT-NCDYLEELLDTSAQKASKRLKTETVMEKNKEEHEIVEN 245
>UNIPROTKB|E1BTE9 [details] [associations]
symbol:E1BTE9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IEA]
InterPro:IPR011012 InterPro:IPR016635 InterPro:IPR027155
PIRSF:PIRSF015588 GO:GO:0008565 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF64356 PANTHER:PTHR11753 GeneTree:ENSGT00550000074761
PANTHER:PTHR11753:SF2 EMBL:AADN02038814 EMBL:AADN02038815
IPI:IPI00571440 Ensembl:ENSGALT00000033574 OMA:MINAILV
Uniprot:E1BTE9
Length = 199
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 19/48 (39%), Positives = 34/48 (70%)
Query: 125 FVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKE 172
FVE L++ F NVCELDL+F+ KV+ ++ E+ + G + ET+ +++ +
Sbjct: 99 FVETLDKCFENVCELDLIFHMDKVHYILQEVVIGGMVLETNMNEIVAQ 146
>UNIPROTKB|F8VWT8 [details] [associations]
symbol:BRF1 "Transcription factor IIIB 90 kDa subunit"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013150 Pfam:PF00382
GO:GO:0006355 GO:GO:0008270 GO:GO:0006352 GO:GO:0043488
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR11618 EMBL:AL512355 HGNC:HGNC:11551 ChiTaRS:BRF1
IPI:IPI01020829 ProteinModelPortal:F8VWT8 SMR:F8VWT8
Ensembl:ENST00000552127 ArrayExpress:F8VWT8 Bgee:F8VWT8
Uniprot:F8VWT8
Length = 155
Score = 106 (42.4 bits), Expect = 0.00063, P = 0.00063
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 362 MTALRILQRMKKDMLHSGRRPNGLIG 387
MTALR+LQRMK+D +H+GRRP+GL G
Sbjct: 1 MTALRLLQRMKRDWMHTGRRPSGLCG 26
>UNIPROTKB|Q3SYD7 [details] [associations]
symbol:BRF1 "Transcription factor IIIB 90 kDa subunit"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] InterPro:IPR000812 InterPro:IPR013150 Pfam:PF00382
GO:GO:0006355 GO:GO:0008270 GO:GO:0006352 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR11618
EMBL:AL512355 UniGene:Hs.424484 HGNC:HGNC:11551 ChiTaRS:BRF1
EMBL:BC103861 IPI:IPI00651667 SMR:Q3SYD7 STRING:Q3SYD7
Ensembl:ENST00000551787 Uniprot:Q3SYD7
Length = 161
Score = 106 (42.4 bits), Expect = 0.00097, P = 0.00097
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 362 MTALRILQRMKKDMLHSGRRPNGLIG 387
MTALR+LQRMK+D +H+GRRP+GL G
Sbjct: 1 MTALRLLQRMKRDWMHTGRRPSGLCG 26
>FB|FBgn0004915 [details] [associations]
symbol:TfIIB "Transcription factor IIB" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0001174 "transcriptional start site selection at RNA polymerase
II promoter" evidence=IDA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=NAS;IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0051101
"regulation of DNA binding" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=ISS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA]
InterPro:IPR000812 InterPro:IPR013137 InterPro:IPR013150
Pfam:PF00382 Pfam:PF08271 PRINTS:PR00685 PROSITE:PS51134
EMBL:AE014134 GO:GO:0046872 GO:GO:0008270 GO:GO:0006357
GO:GO:0005667 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0051101 eggNOG:COG1405 PANTHER:PTHR11618
PROSITE:PS00782 GO:GO:0001174 KO:K03124 InterPro:IPR023486
GeneTree:ENSGT00390000006671 EMBL:M88164 EMBL:M91081 EMBL:U02879
EMBL:U35148 EMBL:BT011459 EMBL:BT015269 PIR:A42695
RefSeq:NP_476888.1 UniGene:Dm.4476 ProteinModelPortal:P29052
SMR:P29052 DIP:DIP-17603N IntAct:P29052 MINT:MINT-900118
STRING:P29052 PaxDb:P29052 PRIDE:P29052 EnsemblMetazoa:FBtr0080025
EnsemblMetazoa:FBtr0333489 GeneID:34430 KEGG:dme:Dmel_CG5193
CTD:34430 FlyBase:FBgn0004915 InParanoid:P29052 OMA:CNDETER
OrthoDB:EOG4N02WP PhylomeDB:P29052 GenomeRNAi:34430 NextBio:788458
Bgee:P29052 GermOnline:CG5193 Uniprot:P29052
Length = 315
Score = 115 (45.5 bits), Expect = 0.00098, P = 0.00098
Identities = 35/145 (24%), Positives = 67/145 (46%)
Query: 238 SREITLDNCKRNISSLCNQLRLNQHCLETSFNLYKMALSRNLTKGRRQILVCAACVYMTC 297
S + +L + + ISS+ +++ L + ++ + NL+K KGR +AC+Y+ C
Sbjct: 108 SSDRSLISAFKEISSMADRINLPKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIAC 167
Query: 298 RLEGTSHLLIDFSELLQICIFELGRTYLRLSQALCISIPSMDPCLYVLRYSNRLDFGAKT 357
R EG + + +I E+GR + +AL S+ + ++ R+ LD
Sbjct: 168 RQEGVPRTFKEICAVSKISKKEIGRCFKLTLKALETSVDLITTADFMCRFCANLDL---P 224
Query: 358 HEVTMTALRILQRMKKDMLHSGRRP 382
+ V A I ++ + + GR P
Sbjct: 225 NMVQRAATHIAKKAVEMDIVPGRSP 249
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 661 583 0.00082 120 3 11 22 0.36 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 164
No. of states in DFA: 611 (65 KB)
Total size of DFA: 318 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.93u 0.14s 44.07t Elapsed: 00:00:06
Total cpu time: 43.95u 0.14s 44.09t Elapsed: 00:00:06
Start: Thu Aug 15 13:11:12 2013 End: Thu Aug 15 13:11:18 2013
WARNINGS ISSUED: 1